BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037477
(639 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255540497|ref|XP_002511313.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550428|gb|EEF51915.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 627
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/629 (66%), Positives = 507/629 (80%), Gaps = 3/629 (0%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
MNR++ +L SLRL+N LLS R S+TRP T+VTHFF F + S+TS + +N +K+
Sbjct: 1 MNRARTILVSLRLSNFLLSTRISTTRPFLTQVTHFF--PCFLSREHSYTSDY-VNIHKKL 57
Query: 61 FFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVC 120
+ S+ P+S +EL+ DWS ELE +LE SP LTHE+V+YVL+KLD DP KA FFNWVC
Sbjct: 58 YSSSKPSSLVELLSVNDWSPELETQLENSSPLLTHETVIYVLKKLDKDPHKAWDFFNWVC 117
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
D+ F+PSS +YSLMLR LV KDS+K FW+TLR+MKE Y +EETYL+ILGV +K +
Sbjct: 118 DRNGFKPSSPLYSLMLRILVKKDSMKNFWITLRKMKEQGFYTDEETYLTILGVFRKERMD 177
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
SD A F D MV+E AMD+V K +V VV ++W +++ K+LE M I L+DNFV+ VLK
Sbjct: 178 SDAVAFKHFFDRMVEENAMDSVVKNVVSVVSATEWSNEVEKELEGMGILLTDNFVIRVLK 237
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
ELR YP+KAL FF W G+ Y+ NTITYN I RVL R +S+ +FW+VVEEMK G+EMD
Sbjct: 238 ELRNYPLKALQFFNWAGKCERYECNTITYNAIARVLGRDDSIGEFWSVVEEMKNAGHEMD 297
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
IDTYIKISRQFQK ++M DAVKL+EFMMDGP+KPSVQDCS+LLRSIS+ N PDL LVFRV
Sbjct: 298 IDTYIKISRQFQKNKLMGDAVKLYEFMMDGPFKPSVQDCSMLLRSISASNYPDLNLVFRV 357
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
NKYE+ GNSLSK+VYDGIHR+LT +G FDEA KMMK M+ AG+EPDNITYSQ++FGLCK
Sbjct: 358 VNKYEATGNSLSKAVYDGIHRSLTSIGNFDEAAKMMKCMQTAGYEPDNITYSQLVFGLCK 417
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
A R E+AC VLDEME +GC+PDIKTWTILIQGHC ANEV +AL+C AKMMEK+ D DADL
Sbjct: 418 ARRLEEACEVLDEMEAHGCLPDIKTWTILIQGHCVANEVGKALMCLAKMMEKHCDPDADL 477
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L VLIN FLSQKR++GAY L ++M++K RLRPWQAT+K LIEKLL R+LEEA+NLLRLM
Sbjct: 478 LAVLINAFLSQKRIDGAYTLFMDMVDKARLRPWQATYKLLIEKLLEVRKLEEALNLLRLM 537
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
K+ N+PPFPEPFVQYIS+FGTV+DA++FLKALSVKEYPS++AYL VF+SFF GRH EAK
Sbjct: 538 KQHNHPPFPEPFVQYISRFGTVDDAADFLKALSVKEYPSTSAYLNVFQSFFRAGRHSEAK 597
Query: 601 DLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
DLL+KCPHHIR+ KIS LFGSAK+ T
Sbjct: 598 DLLFKCPHHIRKHPKISELFGSAKTEDAT 626
>gi|225456884|ref|XP_002277390.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Vitis vinifera]
Length = 631
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/629 (65%), Positives = 504/629 (80%), Gaps = 1/629 (0%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
MNR+KA+L S+R NS S + L +VT S + SNQS+TS F K+
Sbjct: 1 MNRAKAILFSIRFTNSFRSTQFRRASSLCYQVTQSSRFSP-SFSNQSYTSAFPYILYGKL 59
Query: 61 FFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVC 120
FFS+ PNS +EL+L DWSDELE++LE+ S LTHE+V+YVL+KLD DP++ FFNWV
Sbjct: 60 FFSSKPNSIVELVLENDWSDELESELEKSSSVLTHETVIYVLKKLDKDPQRTWNFFNWVT 119
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+K FRPSS +YSL+LR+LV+ +S+KQFWVT+R+MKE I++ETYL+ILGV KK K A
Sbjct: 120 EKNGFRPSSAMYSLILRSLVHGESMKQFWVTIRKMKEQGFCIDKETYLTILGVFKKGKMA 179
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
S+ AL F++ MV+E AMD V K +V++V S W ++ KKL ++K SDNFVL VL+
Sbjct: 180 SEEVALTHFYNRMVQENAMDEVVKKVVELVTMSVWSSEVEKKLGELKNSFSDNFVLHVLR 239
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
ELR YP+KAL FF+WVGE GY+H++ITYN I RVL R +S+ +FW++VEEMK +G+EMD
Sbjct: 240 ELRGYPLKALRFFQWVGECPGYEHSSITYNVIARVLGRDDSIGEFWSMVEEMKSKGHEMD 299
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
IDTYIKISRQFQK +M+EDAVKL+E MMDGPYKPSVQDC++LLRSIS +NPDL LVFRV
Sbjct: 300 IDTYIKISRQFQKNKMLEDAVKLYEIMMDGPYKPSVQDCTMLLRSISLSSNPDLALVFRV 359
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
KYE++GNSL K+VYDGIHR+LT +GRFDEA K+M++M++AG EPDNITYSQ+++GLCK
Sbjct: 360 TEKYEAVGNSLCKAVYDGIHRSLTSVGRFDEAGKIMESMRSAGCEPDNITYSQLVYGLCK 419
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
A + E+AC +LDEME GC+PDIKTWTILIQGHCAA EVD+AL+CFAKMMEKN DADADL
Sbjct: 420 ARKLEEACKLLDEMEACGCVPDIKTWTILIQGHCAAKEVDKALICFAKMMEKNCDADADL 479
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+VLINGFLSQKR++GAYKLLVEM+ L PWQAT+K +I KLLG R+LEEA+NLL LM
Sbjct: 480 LEVLINGFLSQKRIDGAYKLLVEMVNTAHLVPWQATYKLMINKLLGVRKLEEAINLLHLM 539
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
KKQNYPPFPEPF++YISKFGTVEDA EFL ALS K+YPS +AY+ VFESFF EGR EAK
Sbjct: 540 KKQNYPPFPEPFIEYISKFGTVEDAGEFLNALSAKKYPSQSAYVHVFESFFQEGRESEAK 599
Query: 601 DLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
DLLYKCPHHIR+ I LFGSAKS T
Sbjct: 600 DLLYKCPHHIRKHPDICKLFGSAKSEYAT 628
>gi|449440630|ref|XP_004138087.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
gi|449524136|ref|XP_004169079.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Cucumis sativus]
Length = 632
Score = 816 bits (2109), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/626 (62%), Positives = 492/626 (78%), Gaps = 8/626 (1%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
M R A+ +SLRLANS S RS P TR F SS+ S+QS S F IN +
Sbjct: 1 MTRRNAIFTSLRLANSFFSTRSR--YPQVTR----FSPSSY-VSHQSLVSHFTINH-PVL 52
Query: 61 FFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVC 120
FFS++P S L+L+ DWS+ LE +LE L+P LTHE+VVYVL++LD P+KAS FFNW
Sbjct: 53 FFSSNPQSLLQLVSTNDWSEMLETELETLNPTLTHETVVYVLKRLDKQPQKASEFFNWAS 112
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
K SS++YS++LR V +S+K FW+TLR MKE Y++EETY +ILGVL+K+KKA
Sbjct: 113 GKNGSTQSSSIYSMLLRIFVQNESMKLFWITLRLMKERGFYLDEETYKTILGVLRKSKKA 172
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+D L F++ M+++ AMD+V + +VD+VLGSDW + + KLE++ I LSDNFV+ VLK
Sbjct: 173 ADATGLTHFYNRMLQQNAMDSVVQKVVDIVLGSDWSNDVPGKLEELGIALSDNFVIRVLK 232
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
ELR P+KAL FF WVG Y HNT++YN I RVL R +S+ FW V+EEMK +E+D
Sbjct: 233 ELRNSPLKALSFFHWVGCRPDYDHNTVSYNAIARVLGRDDSIEAFWGVIEEMKHANHEID 292
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
IDTYIKISRQFQK +MM +AVKL+E MMDGPYKPS+QDCS+LLR+I++ +NPDL LV+RV
Sbjct: 293 IDTYIKISRQFQKSKMMGEAVKLYELMMDGPYKPSLQDCSVLLRTIAASDNPDLSLVYRV 352
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A K+E+ G SLSK++YDGIHR+LT G+FD+AE ++K+M+NAG+EPDN+TYSQ++FGLCK
Sbjct: 353 AKKFEATGYSLSKAMYDGIHRSLTSTGKFDDAENIVKSMRNAGYEPDNVTYSQLVFGLCK 412
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
A R E+A VLDEME GCIPDIKTWTILIQGHC ANE+D AL+CFAKM+EKN D DADL
Sbjct: 413 ARRLEEARKVLDEMEAQGCIPDIKTWTILIQGHCNANELDIALVCFAKMIEKNCDPDADL 472
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
LDVLI+GFL+QK++NGAY+LL+E+ K +RPWQAT+K LI+ LL R+LEEA+ LLRLM
Sbjct: 473 LDVLISGFLNQKKLNGAYQLLIELTNKAHVRPWQATYKQLIKNLLEVRKLEEAIALLRLM 532
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
KKQNYPPFPEPFVQYISKFGTV+DA +FLK LS KEYPS +AYL +F SFFNEGR+ EAK
Sbjct: 533 KKQNYPPFPEPFVQYISKFGTVQDADDFLKVLSSKEYPSVSAYLHIFNSFFNEGRYSEAK 592
Query: 601 DLLYKCPHHIRQDSKISLLFGSAKSN 626
DLL+KCPHHIR+ +++ LFGSA+SN
Sbjct: 593 DLLFKCPHHIRKHNEVCKLFGSAESN 618
>gi|356564958|ref|XP_003550712.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 779 bits (2011), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/631 (60%), Positives = 480/631 (76%), Gaps = 6/631 (0%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
MNR KA+ SSLR S L+ R TR +VTHF + ++SH +F I T K+
Sbjct: 1 MNRVKAIASSLRTLESSLATRVLVTR---NQVTHFSLHNPLPLFDRSHHLRFPI-THHKL 56
Query: 61 FFSTSP--NSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNW 118
+FST P NS +EL+L DWS LE KLE P + HE+V+YV+++LD +PEKAS FFNW
Sbjct: 57 YFSTKPKPNSIVELLLTNDWSQALELKLENRFPSMPHETVLYVIKRLDKNPEKASCFFNW 116
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK 178
VC K FRPS +VYSL++R L KD++KQFWVTLR MKE+ +++EETYL+I K+ K
Sbjct: 117 VCKKVWFRPSCSVYSLIVRILAAKDTMKQFWVTLRMMKENGFFLDEETYLTISVGFKREK 176
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
SD AL F++ M++E AM +V +V ++ S+W D++ +L ++I+LSDNFV+ V
Sbjct: 177 MDSDSVALTHFYNRMLEENAMQSVVSNVVGIISRSEWGDEVVGELAKLEIQLSDNFVIRV 236
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
LKELR P+KA FF WVG+ SGY+H+T+TYN + RVL R ES+ +FW+V+EEMK+ G+E
Sbjct: 237 LKELRKTPLKAYKFFHWVGKQSGYEHDTVTYNAVARVLPRAESIEEFWSVIEEMKRVGHE 296
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+DIDTYIKI+RQ Q+ RMMEDAVKL+E MMDG KP VQDC++LL+SIS+ + P+L LVF
Sbjct: 297 LDIDTYIKITRQLQRNRMMEDAVKLYELMMDGSCKPLVQDCNMLLKSISANDKPNLDLVF 356
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
RVA KYES G++LSK++YDGIHR+LT G FDEAE +++ M+NAG+EPDNITYSQ++FGL
Sbjct: 357 RVAKKYESTGHTLSKAIYDGIHRSLTSAGNFDEAENIVRTMRNAGYEPDNITYSQMVFGL 416
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK RFE+AC VL++ME + CIPDIKTWTILIQGHC+ANEVD+ALLCFAKM+EK D DA
Sbjct: 417 CKMRRFEEACKVLEDMESSRCIPDIKTWTILIQGHCSANEVDKALLCFAKMIEKGCDPDA 476
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
DLLDVL +GFLSQKR+ GAY+L+ E+ K R+ PWQAT+K LIEKLLG + EEA+ LLR
Sbjct: 477 DLLDVLADGFLSQKRIEGAYELVAEISRKCRISPWQATYKKLIEKLLGVMKFEEALELLR 536
Query: 539 LMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
LMK NYPP+ PFV YISKFG+VEDA FLKALSVK YPS Y+QVFES F EGR E
Sbjct: 537 LMKSHNYPPYHLPFVPYISKFGSVEDAEAFLKALSVKSYPSHIVYVQVFESLFREGRLSE 596
Query: 599 AKDLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
AKDLLYK PHHIR SKI LFGS+++ T
Sbjct: 597 AKDLLYKTPHHIRTHSKICKLFGSSETKSDT 627
>gi|297819444|ref|XP_002877605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323443|gb|EFH53864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/627 (55%), Positives = 457/627 (72%), Gaps = 14/627 (2%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINT---C 57
M RSKA+LSSLR A S +S RS +R F++++ S F I +
Sbjct: 1 MYRSKAILSSLRNAYSQISTRSYLSRAQV----------GFSSNSISPLDSFAIPSRFLW 50
Query: 58 QKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFN 117
+ FS+ P+S+L+L+L DWS E+E L + LTHE+ +YVLRKL+ PEKA F +
Sbjct: 51 KFRTFSSKPDSTLQLVLENDWSKEVEEGLRKPDLSLTHETAIYVLRKLEKYPEKAYYFLD 110
Query: 118 WVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKA 177
WV PS+ +YS+MLR LV + S+K+FW+TL MK+ Y++E+TY +I G L K
Sbjct: 111 WVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLSEMKQGGFYLDEDTYKTIYGELNKE 170
Query: 178 KKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
K +D A+ F++ M+KE AM VA + VV DW ++ ++L++M + LSDNFV+
Sbjct: 171 KSKADAVAVAHFYERMLKENAMSVVAGDVSAVVTKVDWSCEVERELQEMNLVLSDNFVIR 230
Query: 238 VLKELRIYPVKALGFFRWVG-EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
VLKELR +P+KAL FF WVG SGY+H+T+TYN LRVLAR SV +FW+VV+EMK G
Sbjct: 231 VLKELREHPLKALAFFHWVGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAG 290
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
+EMD+DTYIK+SRQFQK RM+ + VKL+E+MMDGP+KPS+QDCSLLLR +S+ NPDL L
Sbjct: 291 HEMDLDTYIKVSRQFQKSRMITETVKLYEYMMDGPFKPSIQDCSLLLRYLSARPNPDLDL 350
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
VFRV+ KYES G SLSK+VYDGIHR+LT +GRFDEAE++ KAM+NAG+EPDNITYSQ++F
Sbjct: 351 VFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVF 410
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLCKA R E+A VLD+ME GC PDIKTWTILIQGHC NE+DRAL CFA M+EK +D
Sbjct: 411 GLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDRALACFANMLEKGFDI 470
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D++LLDVLI+GFL Q R+ GA L+EM++ ++PWQ+T+K LI+KLL ++ +EA++L
Sbjct: 471 DSNLLDVLIDGFLIQNRIEGASIFLMEMVKNANVKPWQSTYKRLIDKLLEIKKGKEALDL 530
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRH 596
L+LMKKQNYP + E F Y++KFGT+EDA +FL LS K+ PS AAY V E+F+ EGR
Sbjct: 531 LQLMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYREGRL 590
Query: 597 YEAKDLLYKCPHHIRQDSKISLLFGSA 623
+AK+LL+ CPHH + KIS LFG+A
Sbjct: 591 TDAKNLLFICPHHFKTHPKISELFGAA 617
>gi|15228363|ref|NP_190408.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207690|sp|Q9STK5.1|PP269_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g48250, chloroplastic; Flags: Precursor
gi|4678363|emb|CAB41173.1| putative protein [Arabidopsis thaliana]
gi|332644870|gb|AEE78391.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/630 (54%), Positives = 455/630 (72%), Gaps = 17/630 (2%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
M RS A+LSSLR A S +S RS +R ++V F+++ S F I + +
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSR---SKV-------GFSSNLSSPLDSFAIVPSRFL 50
Query: 61 F----FSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFF 116
+ FS+ P+S L+L+L DWS E+E L + LTHE+ +YVLRKL+ PEKA F
Sbjct: 51 WKFRTFSSKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFL 110
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
+WV PS+ +YS+MLR LV + S+K+FW+TLR MK+ Y++E+TY +I G L K
Sbjct: 111 DWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSK 170
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
K +D A+ F++ M+KE AM VA + VV DW ++ ++L++MK+ LSDNFV+
Sbjct: 171 EKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVI 230
Query: 237 TVLKELRIYPVKALGFFRWVGEHSG---YKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
VLKELR +P+KAL FF WVG Y+H+T+TYN LRVLAR SV +FW+VV+EMK
Sbjct: 231 RVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMK 290
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
GY+MD+DTYIK+SRQFQK RMM + VKL+E+MMDGP+KPS+QDCSLLLR +S NPD
Sbjct: 291 TAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPD 350
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L LVFRV+ KYES G SLSK+VYDGIHR+LT +GRFDEAE++ KAM+NAG+EPDNITYSQ
Sbjct: 351 LDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQ 410
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++FGLCKA R E+A VLD+ME GC PDIKTWTILIQGHC NE+D+AL CFA M+EK
Sbjct: 411 LVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKG 470
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+D D++LLDVLI+GF+ + GA L+EM++ ++PWQ+T+K LI+KLL ++ EEA
Sbjct: 471 FDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEA 530
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
++LL++MKKQNYP + E F Y++KFGT+EDA +FL LS K+ PS AAY V E+F+ E
Sbjct: 531 LDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYRE 590
Query: 594 GRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623
GR +AK+LL+ CPHH + KIS LFG+A
Sbjct: 591 GRLTDAKNLLFICPHHFKTHPKISELFGAA 620
>gi|224133698|ref|XP_002321639.1| predicted protein [Populus trichocarpa]
gi|222868635|gb|EEF05766.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 691 bits (1783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/475 (67%), Positives = 392/475 (82%)
Query: 155 MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD 214
MKE+ YI+EETYL+I+G+ KK K A+D+AAL F+D M+ E A DNV K +V ++L +
Sbjct: 1 MKEEGFYIDEETYLTIMGICKKEKMANDVAALKHFYDRMIDENAKDNVVKDVVRIILERE 60
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W+ ++ KKL M+I L+DNFV+ VLKELR YPVKAL FF+WV GY+HNT+TYN ++R
Sbjct: 61 WNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNTVTYNALVR 120
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
VL R +S+ +FW+VV+EMK GYEMDIDTYIKISRQFQK ++MEDAV+L+EFMMDGP+KP
Sbjct: 121 VLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEFMMDGPFKP 180
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
SVQDC +LLRS+++ +NPDL LV RV + Y++ GNSLSKSVYDG+HR+ T G+FDEAEK
Sbjct: 181 SVQDCYILLRSVAASDNPDLDLVSRVVDGYKATGNSLSKSVYDGMHRSFTSAGKFDEAEK 240
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++KAM++AG+EPDNITYSQ++FGLCK+ R E+AC VLDEME GCIPDIKTWTILIQGH
Sbjct: 241 IVKAMRDAGYEPDNITYSQLVFGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHF 300
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
AAN+VD+ LLC KM EKN D DADLLDVL+ GFLSQ++++GAY LVEM+ K+RL PWQ
Sbjct: 301 AANQVDKGLLCLVKMTEKNTDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQ 360
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSV 574
AT+K LIEKLL R+LEEA +LLRLMKK NYPPFPEPF QYISKFGTVEDA F K LSV
Sbjct: 361 ATYKLLIEKLLQVRKLEEATDLLRLMKKHNYPPFPEPFDQYISKFGTVEDAVNFFKVLSV 420
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
KEYPSS AYL++ +SF EGR EA+DLL+KCPHHIR+D KIS LFGSAK+ T
Sbjct: 421 KEYPSSVAYLRMLDSFLREGRDSEARDLLFKCPHHIRKDHKISKLFGSAKTGDKT 475
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 105/442 (23%), Positives = 185/442 (41%), Gaps = 39/442 (8%)
Query: 70 LELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSS 129
+ +IL +W+ E+E KL + LT V+ VL++L + P KA FF WV ++ ++ ++
Sbjct: 53 VRIILEREWNKEVEKKLVGMRIVLTDNFVIRVLKELRSYPVKALRFFQWVDRREGYQHNT 112
Query: 130 TVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF 189
Y+ ++R L DS+ +FW + MK ++ +TY+ I +K K D L +F
Sbjct: 113 VTYNALVRVLGRDDSIGEFWSVVDEMKNAGYEMDIDTYIKISRQFQKIKLMEDAVRLYEF 172
Query: 190 -HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
DG K D L+ V SD D D+ + D + T
Sbjct: 173 MMDGPFKPSVQD--CYILLRSVAASDNPDL------DLVSRVVDGYKAT----------- 213
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
G + Y+G+ R + +V+ M+ GYE D TY ++
Sbjct: 214 ------------GNSLSKSVYDGMHRSFTSAGKFDEAEKIVKAMRDAGYEPDNITYSQLV 261
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
K + +E+A K+ + M G P ++ ++L++ + N D GL+ V K
Sbjct: 262 FGLCKSKRLEEACKVLDEMEAGGCIPDIKTWTILIQGHFAANQVDKGLLCLV--KMTEKN 319
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFEPDNITYSQVIFGLCKAGRFEDA 427
+ D + + + D A + M N P TY +I L + + E+A
Sbjct: 320 TDPDADLLDVLVKGFLSQRKMDGAYTFLVEMVNKLRLVPWQATYKLLIEKLLQVRKLEEA 379
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++L M+++ P + + I V+ A+ F + K Y + L +L +
Sbjct: 380 TDLLRLMKKHNYPPFPEPFDQYISKF---GTVEDAVNFFKVLSVKEYPSSVAYLRML-DS 435
Query: 488 FLSQKRVNGAYKLLVEMIEKVR 509
FL + R + A LL + +R
Sbjct: 436 FLREGRDSEARDLLFKCPHHIR 457
>gi|356563135|ref|XP_003549820.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Glycine max]
Length = 635
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/633 (51%), Positives = 443/633 (69%), Gaps = 11/633 (1%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLF---TRVTHFFHISSFTASNQSHTSQFHI-NT 56
MNR +A++ +LR S L+ R ++TR L +VTHF + + SH F + N
Sbjct: 1 MNRLRAIVVNLRFLESPLASRVTATRSLLLTRNQVTHFSLCTPSPLLDNSH--HFLLPNI 58
Query: 57 CQKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFF 116
Q ++FS+ PNS +EL+L DWS LE +LE+ P +THE+VVYVL++++ +PEKA FF
Sbjct: 59 HQNLYFSSKPNSIVELVLTSDWSKGLEQELEKCYPSMTHETVVYVLKRMEANPEKAWCFF 118
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
NWV K+ +RPSS++Y L+LR L ++++K FW+TLR MK Y +EE Y IL K+
Sbjct: 119 NWVSAKEWYRPSSSLYGLILRVLATEETIKLFWITLRTMKTKGFYFDEEMYFPILAGFKR 178
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
D +L +F+ ++E AM V +VD++ GS+W D++ L ++I +SDNFV
Sbjct: 179 KNMNKDRVSLTRFYSQGIQENAMQIVVTKVVDIISGSEWGDEVMSNLAKLEIRMSDNFVT 238
Query: 237 TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
VLKELR P+KA FF WVG+ SGY+H+T+TYN I RVLA +S+ FW+V+EEMK G
Sbjct: 239 RVLKELRNCPLKAYEFFNWVGKQSGYEHDTVTYNAIARVLASTDSIEKFWSVIEEMKSVG 298
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
+E+DIDTYIKIS++ QK +MMEDAVKL+E MDG YKPSV+DCSLLL+SIS+ ++P+L L
Sbjct: 299 HELDIDTYIKISKKLQKNKMMEDAVKLYELTMDGSYKPSVKDCSLLLKSISASDDPNLDL 358
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
VFRV+ KYES ++LSK++YDGIHR+L+ G+ DEAE ++ M+NAG+EPDNITY+Q IF
Sbjct: 359 VFRVSKKYESTWHTLSKAIYDGIHRSLSGAGKLDEAESIVNHMRNAGYEPDNITYNQTIF 418
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK + ++AC VL+EME G IP+IKTWTILIQGHC ANEVDRALLC +M+EK +A
Sbjct: 419 GFCKMRKLDEACKVLEEMESCGFIPEIKTWTILIQGHCVANEVDRALLCLNRMIEKGCNA 478
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
DA +L VLI FL QKR++ AYKLLVE++ K P T+ LI+ LLG +LEEA++L
Sbjct: 479 DAAVLGVLIGSFLGQKRIDDAYKLLVEIVSKHGTSPRHGTYAKLIDNLLGIGKLEEALDL 538
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGR 595
LM+ + P EPFVQYISKFG++EDA +FLK+ K P S + Y +VF+S GR
Sbjct: 539 HCLMRNHEFTPIIEPFVQYISKFGSIEDAIKFLKS---KGTPRSHSVYFRVFKSLLGNGR 595
Query: 596 HYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKV 628
+AKDLL K P +I + KI LF S ++ V
Sbjct: 596 LSDAKDLLSKIP-YISKRKKILELFSSMENCTV 627
>gi|115442501|ref|NP_001045530.1| Os01g0970900 [Oryza sativa Japonica Group]
gi|15289974|dbj|BAB63669.1| pentatricopeptide (PPR) repeat-containing protein -like [Oryza
sativa Japonica Group]
gi|113535061|dbj|BAF07444.1| Os01g0970900 [Oryza sativa Japonica Group]
gi|125573469|gb|EAZ14984.1| hypothetical protein OsJ_04919 [Oryza sativa Japonica Group]
gi|215678751|dbj|BAG95188.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215693250|dbj|BAG88632.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 573
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 267/539 (49%), Positives = 366/539 (67%), Gaps = 12/539 (2%)
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP-SSTVYSLMLRNLVNK--DSLKQFWVTL 152
ESV+Y LR L DP A AFF + P S Y+LMLR L + + FW L
Sbjct: 30 ESVLYSLRTLSKDPSVALAFFRR--SQAGGHPLGSAAYNLMLRTLASHPTSAHSHFWPFL 87
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL- 211
R M + I++ TYL+ L KKA +D A+L + ++ D V
Sbjct: 88 RDMNDAGHSIDQGTYLAALASFKKASLTADYASLTAHYAKAQEDAKGGTPTSAAADAVRA 147
Query: 212 ---GSDWDD--KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
GSD D ++ +KLE + + L++ V VL+E+R +P+KAL FFRW G GYKH +
Sbjct: 148 LEDGSDSDASAELDEKLEGVDLPLTETAVARVLREVRDHPIKALAFFRWAGRQIGYKHGS 207
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
++YN ++RVL R ES+R+FW++++EMK +G +DIDTY+K+SRQFQK M+ +AV+L+E
Sbjct: 208 VSYNAMVRVLGREESMREFWDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLTEAVELYEL 267
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MMDGPYKPS QD +L+R I+ +PDL LV+RV K+E++ +K V+DGIHRALT
Sbjct: 268 MMDGPYKPSKQDGPVLIRRIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSN 327
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GRFDEA +++K MK G +PDNITYSQ+IFGLCKA RF++A LDEME GC+PD+KTW
Sbjct: 328 GRFDEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTW 387
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T+LIQGHCAA EV++AL F +M+EKN +ADA LLDV++ G S +++ +Y VEM++
Sbjct: 388 TMLIQGHCAAGEVEKALQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFVEMVD 447
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
K L PWQ T+K +I +LL ++LEEA+ LLR MK + +PPF +PF +I+K+GT +DA
Sbjct: 448 KANLSPWQGTYKHIIGELLRVKKLEEALGLLRSMKARKFPPFADPFPTHIAKYGTFDDAR 507
Query: 567 EFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624
+FLKAL+V +YPS AYL VF+SFF EGR+ EA+DLLYKCP HIR+ ++ LF S K
Sbjct: 508 QFLKALTVNNKYPSPTAYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFESIK 566
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/421 (23%), Positives = 184/421 (43%), Gaps = 24/421 (5%)
Query: 36 FHISSFTASNQSHTSQFHINTCQKIFFSTSPNSS-------LELILACDWSDELENKLEE 88
F +S TA S T+ H Q+ +P S+ LE D S EL+ KLE
Sbjct: 109 FKKASLTADYASLTA--HYAKAQEDAKGGTPTSAAADAVRALEDGSDSDASAELDEKLEG 166
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
+ LT +V VLR++ + P KA AFF W + ++ S Y+ M+R L ++S+++F
Sbjct: 167 VDLPLTETAVARVLREVRDHPIKALAFFRWAGRQIGYKHGSVSYNAMVRVLGREESMREF 226
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLV 207
W ++ MK D +++ +TY+ + +K ++ L + DG K D +
Sbjct: 227 WDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLTEAVELYELMMDGPYKPSKQDGPV-LIR 285
Query: 208 DVVLGSDWD----DKIGKKLEDM-KIELSDNF--VLTVLKELRIYPVKALGFFRWVGEHS 260
+ LG D ++ +K E + + + D F + L + A R GE
Sbjct: 286 RIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSNGRFDEAAEIVKRMKGE-- 343
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITY+ ++ L + + ++EM+ EG D+ T+ + + +E A
Sbjct: 344 GHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWTMLIQGHCAAGEVEKA 403
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ F M++ + ++++ + S + D F V + S + Y I
Sbjct: 404 LQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFV-EMVDKANLSPWQGTYKHII 462
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L ++ + +EA ++++MK F P + I K G F+DA L + N
Sbjct: 463 GELLRVKKLEEALGLLRSMKARKFPPFADPFPTHI---AKYGTFDDARQFLKALTVNNKY 519
Query: 441 P 441
P
Sbjct: 520 P 520
>gi|125529279|gb|EAY77393.1| hypothetical protein OsI_05381 [Oryza sativa Indica Group]
Length = 573
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 266/539 (49%), Positives = 366/539 (67%), Gaps = 12/539 (2%)
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP-SSTVYSLMLRNLVNK--DSLKQFWVTL 152
ESV+Y LR L DP A AFF + P S Y+LMLR L + + FW L
Sbjct: 30 ESVLYSLRTLSKDPSVALAFFRR--SQAGGHPLGSAAYNLMLRTLASHPTSAHSHFWPFL 87
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL- 211
R M + I++ TYL+ L KKA +D A+L + ++ D V
Sbjct: 88 RDMNDAGHSIDQGTYLAALASFKKASLTADYASLTAHYAKAQEDAKGGTPTSAAADAVRA 147
Query: 212 ---GSDWDD--KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
GSD D ++ +KLE + + L++ V VL+E+R +P+KAL FFRW G GYKH +
Sbjct: 148 LEDGSDSDASAELDEKLEGVDLPLTETAVARVLREVRDHPIKALAFFRWAGRQIGYKHGS 207
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
++YN ++RVL R ES+R+FW++++EMK +G +DIDTY+K+SRQFQK M+ +AV+L+E
Sbjct: 208 VSYNAMVRVLGREESMREFWDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLTEAVELYEL 267
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MMDGPYKPS QD +L+R I+ +PDL LV+RV K+E++ +K V+DGIHRALT
Sbjct: 268 MMDGPYKPSKQDGPVLIRRIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSN 327
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GRFDEA +++K MK G +PDNITYSQ+IFGLCKA RF++A LDEME GC+PD+KTW
Sbjct: 328 GRFDEAAEIVKRMKGEGHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTW 387
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T+LIQGHCAA EV++AL F +M+EKN +ADA LLDV++ G S +++ +Y VEM++
Sbjct: 388 TMLIQGHCAAGEVEKALQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFVEMVD 447
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
K L PWQ T+K +I +LL ++LEEA+ LLR MK + +PPF +PF +I+K+GT +DA
Sbjct: 448 KANLSPWQGTYKHIIGELLRVKKLEEALGLLRSMKARKFPPFADPFPTHIAKYGTFDDAR 507
Query: 567 EFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624
+F+KAL+V +YPS AYL VF+SFF EGR+ EA+DLLYKCP HIR+ ++ LF S K
Sbjct: 508 QFVKALTVNNKYPSPTAYLHVFKSFFTEGRYSEAQDLLYKCPFHIRKHPDVTELFESIK 566
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 184/421 (43%), Gaps = 24/421 (5%)
Query: 36 FHISSFTASNQSHTSQFHINTCQKIFFSTSPNSS-------LELILACDWSDELENKLEE 88
F +S TA S T+ H Q+ +P S+ LE D S EL+ KLE
Sbjct: 109 FKKASLTADYASLTA--HYAKAQEDAKGGTPTSAAADAVRALEDGSDSDASAELDEKLEG 166
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
+ LT +V VLR++ + P KA AFF W + ++ S Y+ M+R L ++S+++F
Sbjct: 167 VDLPLTETAVARVLREVRDHPIKALAFFRWAGRQIGYKHGSVSYNAMVRVLGREESMREF 226
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLV 207
W ++ MK D +++ +TY+ + +K ++ L + DG K D +
Sbjct: 227 WDLIQEMKADGIHVDIDTYVKLSRQFQKRHMLTEAVELYELMMDGPYKPSKQDGPV-LIR 285
Query: 208 DVVLGSDWD----DKIGKKLEDM-KIELSDNF--VLTVLKELRIYPVKALGFFRWVGEHS 260
+ LG D ++ +K E + + + D F + L + A R GE
Sbjct: 286 RIALGPSPDLELVYRVVRKFEAVWEFKTKDVFDGIHRALTSNGRFDEAAEIVKRMKGE-- 343
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITY+ ++ L + + ++EM+ EG D+ T+ + + +E A
Sbjct: 344 GHQPDNITYSQLIFGLCKANRFDEARKALDEMEAEGCVPDLKTWTMLIQGHCAAGEVEKA 403
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ F M++ + ++++ + S + D F V + S + Y I
Sbjct: 404 LQYFTEMVEKNLEADAALLDVMVKGLCSDDKIDASYAFFV-EMVDKANLSPWQGTYKHII 462
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L ++ + +EA ++++MK F P + I K G F+DA + + N
Sbjct: 463 GELLRVKKLEEALGLLRSMKARKFPPFADPFPTHI---AKYGTFDDARQFVKALTVNNKY 519
Query: 441 P 441
P
Sbjct: 520 P 520
>gi|357131801|ref|XP_003567522.1| PREDICTED: pentatricopeptide repeat-containing protein At3g48250,
chloroplastic-like [Brachypodium distachyon]
Length = 585
Score = 508 bits (1308), Expect = e-141, Method: Compositional matrix adjust.
Identities = 268/544 (49%), Positives = 365/544 (67%), Gaps = 17/544 (3%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP-SSTVYSLMLRNLVNKDSLKQ--FWV 150
T ESV+Y LR L DP A AFF P S Y+LMLR L ++ + Q FW
Sbjct: 41 TTESVLYSLRSLSKDPPLALAFFRRSAAGGH--PLGSAAYNLMLRTLASRPASAQDHFWP 98
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL------NQFHDGMVKEIAMDNVAK 204
LR M+ +++ TYL+ L KKA+ A+D A+L ++ + A+
Sbjct: 99 FLRDMEAAGHSVDQGTYLAALASFKKARLAADYASLSARLAKDRDDAAQAGGTPVSAAAE 158
Query: 205 TLVDVVLGSDWDDKIGKKLE--DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+ + GSD + + K+LE D+ + L++ V VL+ELR PVKALGFFRW G GY
Sbjct: 159 AVRGLEEGSD--EALEKRLEGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGY 216
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
H ++ YN + RVL R ESV++FW +++EMK +G +DIDTY+K++RQFQK MM +AV+
Sbjct: 217 THGSVAYNAMARVLGREESVQEFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVE 276
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L+E MMDGPYKPS QD +LLR I+ +PDL L RV K+E++ +K V+DGIHRA
Sbjct: 277 LYELMMDGPYKPSKQDGPVLLRRIALGPSPDLELAHRVVRKFEAVYEFKTKDVFDGIHRA 336
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
LT GRFDEA ++M++M++ G +PDNITYSQ++FGLCKA + ++A VL EME GC PD
Sbjct: 337 LTSNGRFDEAAEVMESMRSEGHQPDNITYSQLVFGLCKANKCDEARKVLVEMENEGCAPD 396
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+KTWT+LIQGHC A EVD+AL +M+E N DADADLLDV++ G +Q +V+ AY L V
Sbjct: 397 LKTWTMLIQGHCTAGEVDKALQYLTEMIENNLDADADLLDVMVRGLCNQDKVDAAYTLFV 456
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
EM++K +L PWQ T+K +I +LL ++LEEA+ LL+ MK + +PPF +PF I+++GT+
Sbjct: 457 EMVDKAQLNPWQGTYKHIISELLRVKKLEEALGLLKSMKARKFPPFADPFPPNIAEYGTL 516
Query: 563 EDASEFLKAL--SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLF 620
EDA +FLKAL V YPS AYL +F+SFF EGR+ EA+DLLYKCP HIR+ I+ LF
Sbjct: 517 EDAKDFLKALKGGVNSYPSHTAYLHMFKSFFAEGRYSEAQDLLYKCPIHIRRHHDITKLF 576
Query: 621 GSAK 624
S K
Sbjct: 577 ESIK 580
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 155/366 (42%), Gaps = 42/366 (11%)
Query: 77 DWSDE-LENKLE--ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYS 133
+ SDE LE +LE +L LT +V VLR+L + P KA FF W +K + S Y+
Sbjct: 165 EGSDEALEKRLEGVDLLLPLTETTVAKVLRELRDCPVKALGFFRWAGRQKGYTHGSVAYN 224
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDG 192
M R L ++S+++FW ++ MK D Y++ +TY+ + +K ++ L + DG
Sbjct: 225 AMARVLGREESVQEFWELIQEMKADGIYLDIDTYVKLNRQFQKRHMMTEAVELYELMMDG 284
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
K D L + LG D ++ ++ V K +Y K
Sbjct: 285 PYKPSKQDGPV-LLRRIALGPSPDLELAHRV--------------VRKFEAVYEFKTKDV 329
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
F +GI R L + + V+E M+ EG++ D TY ++
Sbjct: 330 F----------------DGIHRALTSNGRFDEAAEVMESMRSEGHQPDNITYSQLVFGLC 373
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL- 371
K ++A K+ M + P ++ ++L++ + D L + E + N+L
Sbjct: 374 KANKCDEARKVLVEMENEGCAPDLKTWTMLIQGHCTAGEVDKALQYLT----EMIENNLD 429
Query: 372 -SKSVYDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ D + R L + D A + M + A P TY +I L + + E+A
Sbjct: 430 ADADLLDVMVRGLCNQDKVDAAYTLFVEMVDKAQLNPWQGTYKHIISELLRVKKLEEALG 489
Query: 430 VLDEME 435
+L M+
Sbjct: 490 LLKSMK 495
>gi|326498263|dbj|BAJ98559.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 592
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 257/548 (46%), Positives = 356/548 (64%), Gaps = 19/548 (3%)
Query: 96 ESVVYVLRKLDNDPEKA-SAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ--FWVTL 152
++V+Y LR L DP +A S F P++ Y+LMLR L + + Q FW L
Sbjct: 44 DAVLYSLRGLSKDPPQALSLFRRAAASGHPLGPAA--YNLMLRTLASTPAAAQAHFWPFL 101
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALN-QFHDGMVKEIAMDNVAKTLV-DVV 210
R M+ +++ TYL+ L K+A +D A L+ + A T D V
Sbjct: 102 RDMEAAGHSVDQGTYLAALASFKRASLTTDYATLSARLAKSRADHAAAGGTPLTAAADAV 161
Query: 211 LGSDW-------DDKIGKKLEDMK---IELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
G D D+++ +KLE + + L++ V VL+E R P KAL FFRW G
Sbjct: 162 RGLDLELDQAGLDEELERKLEGVAEQLMPLTEAAVAGVLREARDVPSKALAFFRWAGRQR 221
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+H ++ YN + RVL R +S+R+FW +V+EMK G +DIDTY+K+SRQFQK MM +A
Sbjct: 222 GYEHGSVAYNAMARVLGREDSLREFWELVQEMKAGGVHVDIDTYMKLSRQFQKRHMMTEA 281
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V+L+E MMDGPYKP+ QD LLLR I+ PDL LV+RV K+E++ +K+V+DGIH
Sbjct: 282 VELYELMMDGPYKPAQQDGPLLLRRIAMGPEPDLELVYRVVRKFEAVYEFKTKNVFDGIH 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RALT GRFDEA ++++ M+ AG +PDNITYSQ+IFGLCKA + ++A VLDEME GC
Sbjct: 342 RALTSNGRFDEAAEIVERMRTAGHQPDNITYSQLIFGLCKAAKCDEARQVLDEMEAEGCT 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+KTWT+LIQGHCAA EVD+AL +M+EK+ +ADADLLDV++ G Q + + AY L
Sbjct: 402 PDLKTWTMLIQGHCAAGEVDKALQYLTEMIEKDLEADADLLDVMVKGLCRQDKFDAAYTL 461
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
VEM++ +L PWQ T+K +I +LL ++LEEA+ LL+ MK + +PPF +PF I+++G
Sbjct: 462 FVEMVDNAKLTPWQGTYKHIIAELLRVKKLEEALALLKSMKARKFPPFADPFPSNIAEYG 521
Query: 561 TVEDASEFLKAL--SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISL 618
T+EDA +FLKAL S YP Y+Q+F++FF EGR+ EA+DLLYKCP HIR+ +
Sbjct: 522 TLEDARDFLKALKGSSNNYPQPPTYVQIFKAFFAEGRYSEAQDLLYKCPIHIRRHHDVIE 581
Query: 619 LFGSAKSN 626
LF K+
Sbjct: 582 LFEPKKAE 589
>gi|242060055|ref|XP_002459173.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
gi|241931148|gb|EES04293.1| hypothetical protein SORBIDRAFT_03g047260 [Sorghum bicolor]
Length = 574
Score = 507 bits (1306), Expect = e-141, Method: Compositional matrix adjust.
Identities = 253/535 (47%), Positives = 353/535 (65%), Gaps = 5/535 (0%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ--FWVT 151
T E+V+Y + L DP +A A F Q SS Y+L LR L + S Q FW
Sbjct: 34 TPEAVLYDIHSLSKDPSQALAVFRRSAAAGQ-PVSSAAYNLTLRTLASHPSSAQRHFWPF 92
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL 211
LR M+E +++ TYL+ L KKA +D A+L ++ K A
Sbjct: 93 LREMQEAGHSVDQGTYLAALASFKKASLTADYASLTAHYNKFRKGANSAAAAAAAAAAEA 152
Query: 212 GSDWDDK-IGKKLEDMKI-ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
D D + +L D+ + L++ V+TVL+ELR YP+KAL FFRW + GY H+++ Y
Sbjct: 153 VRDHDAAGLDSRLADIGLLPLTETTVITVLRELREYPIKALAFFRWAEQQQGYTHSSVAY 212
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N + RVL R ESV +FW++++E+K G +DIDTY+K+SR FQK M+ +AV+L+E MMD
Sbjct: 213 NAMARVLGREESVPEFWDLIQEIKAAGMHVDIDTYLKLSRNFQKRHMVREAVELYELMMD 272
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
GP+KPS QD +++R IS +PDL LV RV NK+E++ +K + DG+HRALT G+F
Sbjct: 273 GPFKPSQQDGPIIIRRISLGRSPDLELVNRVVNKFEAVWGVKTKELLDGVHRALTSNGKF 332
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
DEA ++++ M++ G +PDN+TYSQ+++GLCKAG+ EDA VLDEME GC+PD+KTWT+L
Sbjct: 333 DEAAEIVQTMRDQGHQPDNVTYSQLVYGLCKAGKLEDARKVLDEMEAEGCVPDLKTWTLL 392
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
IQG+C+A +VDRA+ F +M+EK DADADLLDV++ G S ++V AY L VEM++K
Sbjct: 393 IQGYCSAGDVDRAVQYFTEMIEKGLDADADLLDVILKGLCSHEKVEEAYSLFVEMVDKAE 452
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL 569
LRP+Q T + LI LL +LEEA+ LL+ MK +P F +PF YI+K GTVEDA F
Sbjct: 453 LRPFQGTCQRLIGDLLRVNKLEEALALLKTMKTCKFPAFVDPFHPYIAKHGTVEDARNFF 512
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624
KAL+VK P+ A Y+ V + FF EGR+ EA++LLYKCP+HIR+ ++ LF S K
Sbjct: 513 KALTVKTSPAPAVYVDVLKLFFAEGRYSEAQELLYKCPNHIRKHPHVTKLFESIK 567
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 172/425 (40%), Gaps = 45/425 (10%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
LT +V+ VLR+L P KA AFF W ++ + SS Y+ M R L ++S+ +FW +
Sbjct: 173 LTETTVITVLRELREYPIKALAFFRWAEQQQGYTHSSVAYNAMARVLGREESVPEFWDLI 232
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLVDVVL 211
+ +K +++ +TYL + +K + L + DG K D + + L
Sbjct: 233 QEIKAAGMHVDIDTYLKLSRNFQKRHMVREAVELYELMMDGPFKPSQQDG-PIIIRRISL 291
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
G D +EL + V K ++ VK V H +T NG
Sbjct: 292 GRSPD-----------LELVNR---VVNKFEAVWGVKTKELLDGV-------HRALTSNG 330
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
A +V+ M+ +G++ D TY ++ K +EDA K+ + M
Sbjct: 331 KFDEAA---------EIVQTMRDQGHQPDNVTYSQLVYGLCKAGKLEDARKVLDEMEAEG 381
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGR 388
P ++ +LL++ S + D R + + G + D I + L +
Sbjct: 382 CVPDLKTWTLLIQGYCSAGDVD-----RAVQYFTEMIEKGLDADADLLDVILKGLCSHEK 436
Query: 389 FDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+EA + M + A P T ++I L + + E+A +L M+ + +
Sbjct: 437 VEEAYSLFVEMVDKAELRPFQGTCQRLIGDLLRVNKLEEALALLKTMKTCKFPAFVDPFH 496
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I H V+ A F + K A A +DVL F ++ R + A +LL +
Sbjct: 497 PYIAKH---GTVEDARNFFKALTVKTSPAPAVYVDVL-KLFFAEGRYSEAQELLYKCPNH 552
Query: 508 VRLRP 512
+R P
Sbjct: 553 IRKHP 557
>gi|413951210|gb|AFW83859.1| hypothetical protein ZEAMMB73_953172 [Zea mays]
Length = 598
Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust.
Identities = 246/534 (46%), Positives = 343/534 (64%), Gaps = 5/534 (0%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL-KQFWV 150
+L+ E+V+Y + L DP +A A F Q S Y+LMLR L + S + FW
Sbjct: 55 RLSPEAVLYNIHSLSKDPSQALAVFRRSVAAGQ-PVGSAAYNLMLRTLASHPSAQRHFWP 113
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
LR M+E +++ TYL+ L KKA +D A+L +D K A V
Sbjct: 114 FLREMQEAGHSVDQGTYLAALASFKKASLTADYASLTAHYDKFRKGAKSATAAAEAVRDH 173
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
+ D ++ + L++ V TVL+ELR +P+KAL FFRW G GY H+++ YN
Sbjct: 174 DAAGLDSRLSAI---GLLPLTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSSVAYN 230
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
+ RVL R ESV +FW+++ E K G +DIDTY+K+SR FQ+ M+ +AV+L+E MMDG
Sbjct: 231 AMARVLGREESVPEFWDLIRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYELMMDG 290
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P+KP+ QD +++R IS +PDL LV RV NK+E++ +K + DG+HRALT+ G FD
Sbjct: 291 PFKPAQQDGPIIIRRISMGPSPDLELVNRVVNKFEAVWGVKTKELLDGVHRALTRNGMFD 350
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA ++++ MK G +PDN+TYSQ+++GLCKA + EDA VLDEME GC+PD+KTWT+LI
Sbjct: 351 EAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTWTLLI 410
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C A +VDRA+ +M+EK DADA+LLDV++ G S ++V AY +EM++K L
Sbjct: 411 HGCCLAGDVDRAVQYLTEMIEKGLDADANLLDVILKGLCSHEKVEEAYSFFIEMVDKTEL 470
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
RPWQ T + LI LL +LEEA++LL+ MK +PPF +PF YI+K+GTVEDA F K
Sbjct: 471 RPWQGTCQHLINDLLRVNKLEEALSLLKTMKTCKFPPFADPFPPYIAKYGTVEDARNFFK 530
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAK 624
A++V P AYL V + FF EGR+ EA+DLLY CP+HIR+ + LFGS K
Sbjct: 531 AMTVNTSPEPVAYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPDVIKLFGSIK 584
>gi|195616298|gb|ACG29979.1| hypothetical protein [Zea mays]
Length = 577
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 250/552 (45%), Positives = 349/552 (63%), Gaps = 8/552 (1%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP-SSTVYSLMLRNLVNKDSL-KQ 147
S +LT E+V+Y + L DP +A A F Q P S Y+LMLR L + S +
Sbjct: 28 SNRLTPEAVLYNIHSLSKDPSQALAVFRRSVAAGQ--PVGSAAYNLMLRTLASHPSAQRH 85
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
FW LR M+E +++ TYL+ L KKA +D A+L +D K
Sbjct: 86 FWPFLREMQEAGHSVDQGTYLAALASFKKASLTADYASLTAHYDKFRKGAKSATAVSAAA 145
Query: 208 DVVLGSDWDDKIGKKLEDMKI-ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
+ + +L + + L++ V TVL+ELR +P+KAL FFRW G GY H++
Sbjct: 146 AEAVRDHDAAGLDSRLSAIGLLPLTETSVTTVLRELREHPIKALAFFRWAGRQQGYTHSS 205
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+ YN + RVL R ESV +FW+++ E K G +DIDTY+K+SR FQ+ M+ +AV+L+E
Sbjct: 206 VAYNAMARVLGREESVPEFWDLIRETKAAGMHVDIDTYLKLSRNFQRRHMVREAVELYEL 265
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MMDGP+KP+ QD +++R IS +PDL LV RV NK+E++ +K + DG+HRALT+
Sbjct: 266 MMDGPFKPAQQDGPIIIRRISLGPSPDLELVNRVVNKFEAVWGVKTKELLDGVHRALTRN 325
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G FDEA ++++ MK G +PDN+TYSQ+++GLCKA + EDA VLDEME GC+PD+KTW
Sbjct: 326 GMFDEAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDEMEAEGCVPDLKTW 385
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T+LI G C A +VDRA+ +M+EK DADA+LLDV++ G S ++V AY +EM+
Sbjct: 386 TLLIHGCCLAGDVDRAVQYLTEMIEKGLDADANLLDVILKGLCSHEKVEEAYSFFIEMVN 445
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
K LRPWQ T + LI LL +LEEA++LL+ MK +PPF +PF YI+K+GTVEDA
Sbjct: 446 KTELRPWQGTCQHLINDLLRVNKLEEALSLLKTMKTCKFPPFADPFPPYIAKYGTVEDAR 505
Query: 567 EFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSN 626
F KA++V P AYL V + FF EGR+ EA+DLLY CP+HIR+ + LFGS K
Sbjct: 506 NFFKAMTVNTSPEPVAYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKHPDVIKLFGSIKVE 565
Query: 627 KVT---IPSRKE 635
+ + SRK+
Sbjct: 566 SASASRLGSRKQ 577
>gi|212722066|ref|NP_001132329.1| uncharacterized protein LOC100193771 [Zea mays]
gi|194694094|gb|ACF81131.1| unknown [Zea mays]
Length = 502
Score = 460 bits (1184), Expect = e-126, Method: Compositional matrix adjust.
Identities = 232/491 (47%), Positives = 322/491 (65%), Gaps = 4/491 (0%)
Query: 135 MLRNLVNKDSL-KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM 193
MLR L + S + FW LR M+E +++ TYL+ L KKA +D A+L +D
Sbjct: 1 MLRTLASHPSAQRHFWPFLREMQEAGHSVDQGTYLAALASFKKASLTADYASLTAHYDKF 60
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
K A V + D ++ + L++ V TVL+ELR +P+KAL FF
Sbjct: 61 RKGAKSATAAAEAVRDHDAAGLDSRLSAI---GLLPLTETSVTTVLRELREHPIKALAFF 117
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
RW G GY H+++ YN + RVL R ESV +FW+++ E K G +DIDTY+K+SR FQ+
Sbjct: 118 RWAGRQQGYTHSSVAYNAMARVLGREESVPEFWDLIRETKAAGMHVDIDTYLKLSRNFQR 177
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
M+ +AV+L+E MMDGP+KP+ QD +++R IS +PDL LV RV NK+E++ +K
Sbjct: 178 RHMVREAVELYELMMDGPFKPAQQDGPIIIRRISMGPSPDLELVNRVVNKFEAVWGVKTK 237
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ DG+HRALT+ G FDEA ++++ MK G +PDN+TYSQ+++GLCKA + EDA VLDE
Sbjct: 238 ELLDGVHRALTRNGMFDEAAEIVQTMKAQGHQPDNVTYSQLVYGLCKADKLEDARKVLDE 297
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
ME GC+PD+KTWT+LI G C A +VDRA+ +M+EK DADA+LLDV++ G S ++
Sbjct: 298 MEAEGCVPDLKTWTLLIHGCCLAGDVDRAVQYLTEMIEKGLDADANLLDVILKGLCSHEK 357
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
V AY +EM++K LRPWQ T + LI LL +LEEA++LL+ MK +PPF +PF
Sbjct: 358 VEEAYSFFIEMVDKTELRPWQGTCQHLINDLLRVNKLEEALSLLKTMKTCKFPPFADPFP 417
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
YI+K+GTVEDA F KA++V P AYL V + FF EGR+ EA+DLLY CP+HIR+
Sbjct: 418 PYIAKYGTVEDARNFFKAMTVNTSPEPVAYLHVLKLFFAEGRYSEAQDLLYGCPNHIRKH 477
Query: 614 SKISLLFGSAK 624
+ LFGS K
Sbjct: 478 PDVIKLFGSIK 488
>gi|225451887|ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Vitis vinifera]
Length = 650
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 209/555 (37%), Positives = 331/555 (59%), Gaps = 3/555 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE++N++E ++HE V+ VL L+++PE A + F+WV + R SS Y+LML L
Sbjct: 97 DEIKNEVESSDIVVSHELVLKVLENLESNPEVARSVFDWVLRAESERLSSKSYNLMLGIL 156
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMVKEIA 198
+ + +FW + MK+ + + Y+ L +K SDL L F G V + +
Sbjct: 157 GSNGFVSEFWDLVEVMKKKGYGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSVDD-S 215
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ + + ++ W D + +L ++K+ S + V VL+ L + P+KAL FFRWV E
Sbjct: 216 IQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEE 275
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
KH+ TYN +LRVL R + + FW V +EM+ GYEM++ TY K+ +F K +M++
Sbjct: 276 SDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIK 335
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ V L+EF M G KPS+ DC+ LLR I D+ L RV Y GN L+KS+ D
Sbjct: 336 EVVDLYEFAMSGANKPSMYDCTFLLRKIVVSKVLDISLFSRVVRTYTEGGNILTKSMLDA 395
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I ++LT +GRF E K++KAM+ G+ + +++ FGL A + ++A ++ ME++
Sbjct: 396 ILKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSD 455
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGA 497
C P+ +TW+ LI+G+C A ++D+A CF KM+EK + A +VL+N + + R A
Sbjct: 456 CRPNYRTWSSLIEGYCVAGDLDKASDCFQKMVEKEGVSYAGYAFEVLVNAYCCKGRSVDA 515
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
LL ++ K + +PW +T+K LI KLL + A+NLL LMK +PPF +PF++Y+S
Sbjct: 516 CGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVS 575
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
+ GT +DA FL+A++VK +PS++ +LQ FE+FF GRH EA+D L KCP +IR + +
Sbjct: 576 RTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVL 635
Query: 618 LLFGSAKSNKVTIPS 632
LF + KS + + +
Sbjct: 636 NLFYTMKSGEAAMAA 650
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 144/373 (38%), Gaps = 48/373 (12%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W D +E +L L + + V VL L +P KA FF WV + + Y+ MLR
Sbjct: 232 WGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLR 291
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L +D +++FW M+ +E TY ++G K K ++ L +F
Sbjct: 292 VLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEF-------- 343
Query: 198 AMDNVAK-TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
AM K ++ D +L+++ + V + F V
Sbjct: 344 AMSGANKPSMYDCTF--------------------------LLRKIVVSKVLDISLFSRV 377
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFW---NVVEEMKKEGYEMDIDTYIKISRQFQK 313
N +T + + +L SV F +++ M++ GY + KI+
Sbjct: 378 VRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSS 437
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL----GN 369
R ++A + M D +P+ + S L+ + D + ++ ++ + G
Sbjct: 438 ARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAGDLD-----KASDCFQKMVEKEGV 492
Query: 370 SLSKSVYDGIHRALTKLGR-FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S + ++ + A GR D + F+P + TY +I L G F+ A
Sbjct: 493 SYAGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAAL 552
Query: 429 NVLDEMEENGCIP 441
N+L M+++ P
Sbjct: 553 NLLGLMKDHEFPP 565
>gi|147775369|emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
Length = 650
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 206/556 (37%), Positives = 326/556 (58%), Gaps = 5/556 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE++N++E ++HE V+ VL L+++PE A F+WV + R SS Y+LML L
Sbjct: 97 DEIKNEVESSDIVVSHELVLKVLENLESNPEVARXVFDWVLRAESERLSSKSYNLMLGIL 156
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ + +FW + MK+ + + Y+ L +K SDL L + ++
Sbjct: 157 GSNGFVSEFWDLVEVMKKKGYGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSVDNSI 216
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ + ++ W D + +L ++K+ S + V VL+ L + P+KAL FFRWV E
Sbjct: 217 QKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEES 276
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
KH+ TYN +LRVL R + + FW V +EM+ GYEM++ TY K+ +F K +M+ +
Sbjct: 277 DLXKHDKXTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYXKVVGRFYKRKMIXE 336
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
V L+EF M G KPS+ DC+ LLR I D+ L RV Y GN L+KS+ D
Sbjct: 337 VVDLYEFAMSGANKPSMYDCTFLLRKIVVSKVLDISLFSRVVRTYTEGGNILTKSMLDAX 396
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++LT +GRF E K++KAM+ G+ + +++ FGL A + ++A ++ ME++ C
Sbjct: 397 LKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDC 456
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK---NYDADADLLDVLINGFLSQKRVNG 496
P+ +TW+ LI+G+C A ++D+A CF KM+EK +Y A +VL+N + + R
Sbjct: 457 RPNYRTWSSLIEGYCVAGDLDKASDCFQKMVEKEGVSYXGYA--FEVLVNAYCCKGRSVD 514
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL ++ K + +PW +T+K LI KLL + A+NLL LMK +PPF +PF++Y+
Sbjct: 515 ACGLLCDLASKEKFKPWHSTYKLLISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYV 574
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
S+ GT +DA FL+A++VK +PS++ +LQ FE+FF GRH EA+D L KCP +IR + +
Sbjct: 575 SRTGTGDDAITFLRAMTVKRFPSTSVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADV 634
Query: 617 SLLFGSAKSNKVTIPS 632
LF + KS + + +
Sbjct: 635 LNLFYTMKSGEAAMAA 650
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 152/396 (38%), Gaps = 53/396 (13%)
Query: 55 NTCQKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASA 114
N+ QKI S ++I + W D +E +L L + + V VL L +P KA
Sbjct: 214 NSIQKICSRVS-----KIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALI 268
Query: 115 FFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
FF WV + + Y+ MLR L +D +++FW M+ +E TY ++G
Sbjct: 269 FFRWVEESDLXKHDKXTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYXKVVGRF 328
Query: 175 KKAKKASDLAALNQFHDGMVKEIAMDNVAK-TLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
K K ++ L +F AM K ++ D
Sbjct: 329 YKRKMIXEVVDLYEF--------AMSGANKPSMYDCTF---------------------- 358
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW---NVVE 290
+L+++ + V + F V N +T + + L SV F +++
Sbjct: 359 ----LLRKIVVSKVLDISLFSRVVRTYTEGGNILTKSMLDAXLKSLTSVGRFGECNKLLK 414
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M++ GY + KI+ R ++A + M D +P+ + S L+
Sbjct: 415 AMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAG 474
Query: 351 NPDLGLVFRVANKYESL----GNSLSKSVYDGIHRALTKLGR-FDEAEKMMKAMKNAGFE 405
+ D + ++ ++ + G S ++ + A GR D + F+
Sbjct: 475 DLD-----KASDCFQKMVEKEGVSYXGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFK 529
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
P + TY +I L G F+ A N+L M+++ P
Sbjct: 530 PWHSTYKLLISKLLVQGGFQAALNLLGLMKDHEFPP 565
>gi|357494383|ref|XP_003617480.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518815|gb|AET00439.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 502
Score = 393 bits (1010), Expect = e-106, Method: Compositional matrix adjust.
Identities = 238/591 (40%), Positives = 335/591 (56%), Gaps = 120/591 (20%)
Query: 41 FTASNQSHTS-QFHINTCQKIFFST-SPNSSLELILACDWSDELENKLE-ELSPKLTHES 97
NQ + S F + QK++FS+ P+S L+L+ +WS++LEN+LE + P LTHE+
Sbjct: 12 LATHNQVNPSISFLLRFQQKLYFSSLKPDSILQLVYKNEWSEKLENELEKQYRPSLTHET 71
Query: 98 VVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
VVYV E+A+ + + K+ P + S W
Sbjct: 72 VVYVFELY----ERANLDYFTDNEGKRVLPHLAISS---------------WFE------ 106
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD 217
K K SD AL+ F+ M++E M +V +VD++LG DWDD
Sbjct: 107 -----------------KDKKMISDGLALSHFYSEMLQESTMQSVVTKVVDIILGPDWDD 149
Query: 218 --KIGKKLEDMKIE-LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
K+ +L +++I+ L+D+FV+ VL+ L+ P+KA FF WVG+ SGY+HNT+TYN + R
Sbjct: 150 DDKVENQLANVRIQQLTDDFVIRVLEGLQNRPLKAYKFFHWVGKQSGYQHNTVTYNYVAR 209
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
VLA+ +S+ +FW++ EEMK G+E+D++T IKISRQ Q+ RMM+ L E MMD YKP
Sbjct: 210 VLAKMDSIEEFWSI-EEMKSVGHELDLNTSIKISRQLQENRMMDG---LHEHMMDSSYKP 265
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
SV DC +LL++I+ + P L L FRV VYDGI ++ T G+FDEA+
Sbjct: 266 SVLDCIMLLKNIAESDEPGLDLFFRV-------------EVYDGILKSFTSAGKFDEAQI 312
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC---------IPD--- 442
++K M NAG++P +T++++ GLCK RFE+A V+DEM+ GC + D
Sbjct: 313 IVKTMTNAGYKPHKLTHNEIASGLCKLRRFEEASKVIDEMQACGCFTIRGVYMMVNDYEV 372
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNY-DADADLLDVLINGFLSQKRVNGAYKLL 501
IKTW ILI+G+C A E+D+ALL AKM+E+N D DL +VL++ L+Q R++GAYKL
Sbjct: 373 IKTWKILIKGYCDAGELDKALLSLAKMIEQNLAGVDDDLFEVLVDALLTQGRIDGAYKLF 432
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
+ KL G R+ EE YISKFGT
Sbjct: 433 L--------------------KLTGVRKFEE----------------------YISKFGT 450
Query: 562 VEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
+EDA++FLK LS YPS YLQ+FES F EGR EAK LL KCPHHIR+
Sbjct: 451 MEDAAKFLKVLSKNNYPSHKVYLQIFESLFQEGRLSEAKYLLNKCPHHIRK 501
>gi|356523687|ref|XP_003530467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 628
Score = 359 bits (921), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 195/548 (35%), Positives = 318/548 (58%), Gaps = 7/548 (1%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S++ + L+ +TH++V+ VL KLD++ E A FF WV + R SS Y+ MLR
Sbjct: 76 SEDFKTLLDSNRVMITHDAVLAVLWKLDSNVEAARRFFLWVSENHPERLSSKCYNSMLRV 135
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIA 198
L + +FW + MK+ + + +L +K +D+A L +D + ++
Sbjct: 136 LGTNGVVHEFWDLVDVMKKKGYGVSKGVKEIVLESFEKGGMVADVAKLKGLYDNLNEK-- 193
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
N+A + +V + WDD + ++++D+ + S + V VL+ L P KAL FFRW+ E
Sbjct: 194 --NIA-IVCRIVRNNVWDDDVERQIKDLNVGFSGDVVKMVLESLASEPAKALIFFRWLEE 250
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+K + TYN + RVL R +S+ FW +V +M+ G+EM+ +T++K+ +F K RM++
Sbjct: 251 SGMFKQDGATYNAMARVLGREDSIDRFWKLVGDMRNAGFEMEFETFVKVLGRFCKRRMVK 310
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DAV+L+EF M G KP+VQ C LLR +++ D+ L RV + GN L+ S+ D
Sbjct: 311 DAVELYEFAMTGVNKPTVQCCVFLLRKVAAGKELDMDLFLRVLKVFTGSGNLLTDSMADA 370
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + LT +GR E K++K M+ G N+ S++ + L AG E A ++ +E +
Sbjct: 371 VLKTLTSVGRTGEWNKVLKEMEIVGCCRCNLQ-SKIAYRLGAAGNKEQAHEFMNRIEASR 429
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGA 497
PD KTW LI+GHC A +D+A F +++EK A A DVL+N + R A
Sbjct: 430 SSPDRKTWDSLIEGHCVAGNLDKAFESFKEIVEKEGVASAGYSFDVLMNSYCQMNRAVDA 489
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
K+L ++ + +L+PW +T+K L+ KLL +A+N+L LM+ +PPF +PF++++S
Sbjct: 490 SKILCRLVNEKKLKPWHSTYKLLVTKLLVQGGFTDALNILGLMRTLGFPPFTDPFIEHLS 549
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
K G+ A+ FLKA++ K +PS++ +L +FE+FF GRH EA++ L KCP +IR + +
Sbjct: 550 KSGSGNAAALFLKAMTSKRFPSTSMFLCMFEAFFKNGRHEEAQNFLSKCPRYIRNHADVL 609
Query: 618 LLFGSAKS 625
LF S S
Sbjct: 610 NLFCSMNS 617
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W D++E ++++L+ + + V VL L ++P KA FF W+ + F+ Y+ M R
Sbjct: 207 WDDDVERQIKDLNVGFSGDVVKMVLESLASEPAKALIFFRWLEESGMFKQDGATYNAMAR 266
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L +DS+ +FW + M+ +E ET++ +LG K + D L +F V +
Sbjct: 267 VLGREDSIDRFWKLVGDMRNAGFEMEFETFVKVLGRFCKRRMVKDAVELYEFAMTGVNKP 326
Query: 198 AMDNVAKTLVDVVLGSDWD 216
+ L V G + D
Sbjct: 327 TVQCCVFLLRKVAAGKELD 345
>gi|356568865|ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Glycine max]
Length = 629
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 209/619 (33%), Positives = 338/619 (54%), Gaps = 18/619 (2%)
Query: 25 TRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSP---NSSLELILACDW--- 78
+RP T + SS + S F +N + F S+ P + + +L D
Sbjct: 14 SRPRITYHSQVLPYSSSIPRRFAANSTFPLNPSFRRF-SSEPVLAQADTDHLLVADIFSK 72
Query: 79 ---SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLM 135
S++ + L +TH++V+ VL K D++ + A FF WV + R SS Y+ M
Sbjct: 73 PVDSEDFKTLLGSNRVSITHDAVLAVLGKFDSNVDAARRFFQWVSENHPERLSSKCYNSM 132
Query: 136 LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMV 194
L L + +FW + MK+ + + +L +K D+A L F +
Sbjct: 133 LCVLGTNGFVDEFWDLVNVMKKKGYGVSKGVKERVLESFEKGGMDGDVAKLKGLFDNSKE 192
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
K IA+ + +V + W D + K++ED+ + S V TVL+ L + PVKAL FFR
Sbjct: 193 KNIAI------VCRIVRNNVWGDDVEKQIEDLNVGFSSEVVKTVLESLVLEPVKALIFFR 246
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
W+ E +KH+ TYN + RVL R + + FW +V +M+ G+EM+ +T++K+ +F K
Sbjct: 247 WLEESGLFKHDGRTYNAMARVLGREDLIDRFWKLVGDMRSAGFEMEAETFVKVLGRFCKR 306
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
RM++DAV+L+EF M G KP+VQ C LLR +++ D L RV + GN L+ S
Sbjct: 307 RMVKDAVELYEFAMAGANKPTVQCCVFLLRKVAAGKELDTDLFSRVLKVFTGNGNVLTDS 366
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V + + ++LT +GR E K++K M++ GF S++ + L AG E A ++ +
Sbjct: 367 VANAVLKSLTSVGRTGEWNKVLKEMEDCGFVAGGSLQSKIAYRLGAAGNKEQAHEFMNRI 426
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKR 493
E +G P KTW LIQG+C A +D+A F +++EK A A +VL+N + R
Sbjct: 427 EVSGSNPYRKTWESLIQGYCVAGNLDKAFESFKEIVEKEGVASAGYSFNVLMNSYCQMNR 486
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+L ++ + +L+PW +T+K L+ KLL +A+N+L LM+ +PPF +PF+
Sbjct: 487 AVDASKILCRLVNEKQLKPWHSTYKLLVTKLLVQGGFTDALNILGLMRTHGFPPFTDPFI 546
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
+++SK G+ +DA FLKA++ K +PS++ +L++FE+FF RH EA++ L KCP +IR
Sbjct: 547 EHLSKSGSGDDAVLFLKAMTSKRFPSTSMFLRMFEAFFKHRRHEEAQNFLSKCPRYIRNH 606
Query: 614 SKISLLFGSAKSNKVTIPS 632
+ + LF S S + S
Sbjct: 607 ADVLNLFCSLNSKEAASSS 625
>gi|224127560|ref|XP_002329308.1| predicted protein [Populus trichocarpa]
gi|222870762|gb|EEF07893.1| predicted protein [Populus trichocarpa]
Length = 658
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 315/566 (55%), Gaps = 9/566 (1%)
Query: 72 LILACDW------SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQF 125
++L CD SD++ +LE S ++H+ V+ VL+ L + P A FF+WV K
Sbjct: 87 VLLVCDVFTKFDDSDDINKELELSSVVISHDLVLKVLKSLGSKPGVAKRFFDWVLKKDSE 146
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
R SS Y+ ML L + +FW + +MK + T +L + D+
Sbjct: 147 RLSSKSYNWMLGILGVNGLVAEFWELVDKMKTKGYGVSGVTRDRVLEKFENEGLKGDIEK 206
Query: 186 LNQ-FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L F G + +++ + + +V W + + +++ + E S V VL+ L I
Sbjct: 207 LKGVFATGSIDN-SVEKIGLRMSRIVRSKFWGEDVEGEIKGLSAEFSSGLVKIVLEHLAI 265
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
P+KAL FFRWV E KH+ +YN + RVL + + FW V++EM+ G+EM+++T+
Sbjct: 266 EPMKALIFFRWVEESELCKHDGGSYNAMARVLGSKDCIDRFWKVIDEMRSNGFEMEVETF 325
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ F + +M+++AV L+EF M+G KPS + C+ LLR+I D+GL R+ +
Sbjct: 326 DTVLAWFMRRKMIKEAVDLYEFAMNGANKPSSKYCTYLLRNIVVCKQLDIGLFSRIVKVF 385
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
GN L+ S+ D + +AL +GRF E K+++ M AGF ++ FGL AG+
Sbjct: 386 TENGNVLTDSMLDAVLKALRSVGRFKECNKILREMMVAGFVASGNLQRKIAFGLTSAGKN 445
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDV 483
+A +D ME +G D K W LI+GHC + ++++A CF KM+EK A +++
Sbjct: 446 YEAIEFVDHMESSGSDLDNKAWASLIEGHCVSGDLEKASDCFKKMVEKKGVTGAGYAVEL 505
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+N + + R A LL + + + +L PW+ T+K LI KLL ++A+NLL LM+
Sbjct: 506 LVNAYCLKNRAGDACNLLCDYVCQNQLHPWRTTYKVLISKLLAQGGFKDALNLLGLMQSH 565
Query: 544 NYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
PP+ +PF +++SK GT +DA F+ A++ K++PS + L++FE+FFN RH EA+D L
Sbjct: 566 GIPPYIDPFFEFVSKSGTGDDAIAFMNAMTTKKFPSISVSLRLFEAFFNAKRHSEAQDFL 625
Query: 604 YKCPHHIRQDSKISLLFGSAKSNKVT 629
KCP IR + + LF S KS+K T
Sbjct: 626 SKCPVFIRNHADVLTLFCSMKSSKDT 651
>gi|449482262|ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Cucumis sativus]
Length = 656
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 312/547 (57%), Gaps = 3/547 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE+ LE ++H+ V+ VL +L+++P+ A FF+WV + SS ++LML L
Sbjct: 99 DEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGIL 158
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+K+FW MK+ + + +L K S+ L + +
Sbjct: 159 GVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSP 218
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
DN+ + ++ + W + + ++L DM + S + V +L++L P KA FF W+ E
Sbjct: 219 DNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDES 278
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + VL R + + FW VV+EM+ +GY+M+++T+ K+ +F K RM+E+
Sbjct: 279 GMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEE 338
Query: 320 AVKLFEFMMDGPYKPSVQDC-SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
AV L+ F M KPS +DC + LL+ I+ DL L R + GN L S+
Sbjct: 339 AVNLYVFAMSVGDKPS-EDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFA 397
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ R+L+ +GR E +++ MK G+ +V + L + G+ ++A + ++ +E +G
Sbjct: 398 VLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASG 457
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGA 497
C PD KTW LI+GHCAA ++D+A C KM+EK + A LD+++NG+ +K A
Sbjct: 458 CNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDA 517
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
LL ++++K +L+P +T+KTLI KLL ++A+ LL +M+ +PPF EPF+ Y+S
Sbjct: 518 SHLLFDLVDKSQLKPRHSTYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVS 577
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
K GT +D EFLK ++ K++PS+ LQ+FE+FF GRH +A+DLL KCP +IR + +
Sbjct: 578 KSGTADDGLEFLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVL 637
Query: 618 LLFGSAK 624
LF S K
Sbjct: 638 DLFCSMK 644
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 169/410 (41%), Gaps = 18/410 (4%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+VD++ S D+I K LE + +S + VL VL +L P A+ FF WV G K
Sbjct: 87 VIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKL 146
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++ ++N +L +L + V+ FW++ +MKK+GY M K+ +F K + +A KL
Sbjct: 147 SSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLR 206
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ G S + + + N + ++ + S + + K + + +
Sbjct: 207 DMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPA 266
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K F + ++ F+ D TY+ + L + + V+DEM G +++
Sbjct: 267 KAYIF-----FLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEME 321
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN-----GAYK 499
T+T ++ C ++ A+ + M D L L+ ++ + A K
Sbjct: 322 TFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALK 381
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYI 556
+ E ++ + ++ L R E +L +MK+ Y +
Sbjct: 382 IFSESGNVLK----DSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRL 437
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
S+ G ++A++F+ L P + + + E G +A D ++K
Sbjct: 438 SRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 487
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W +++E +L ++S + + V +L L DP KA FF W+ + F+ Y+ M
Sbjct: 234 WGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMAT 293
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILG 172
L +D + +FW + M+ +E ET+ +LG
Sbjct: 294 VLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLG 328
>gi|449447687|ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
mitochondrial-like [Cucumis sativus]
Length = 656
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 191/547 (34%), Positives = 312/547 (57%), Gaps = 3/547 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE+ LE ++H+ V+ VL +L+++P+ A FF+WV + SS ++LML L
Sbjct: 99 DEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKLSSKSFNLMLGIL 158
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+K+FW MK+ + + +L K S+ L + +
Sbjct: 159 GVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLRDMFASGSTDKSP 218
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
DN+ + ++ + W + + ++L DM + S + V +L++L P KA FF W+ E
Sbjct: 219 DNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDES 278
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + VL R + + FW VV+EM+ +GY+M+++T+ K+ +F K RM+E+
Sbjct: 279 GMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLGRFCKRRMIEE 338
Query: 320 AVKLFEFMMDGPYKPSVQDC-SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
AV L+ F M KPS +DC + LL+ I+ DL L R + GN L S+
Sbjct: 339 AVNLYVFAMSVGDKPS-EDCLTFLLKKIAVSEQFDLDLFSRALKIFSESGNVLKDSMVFA 397
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ R+L+ +GR E +++ MK G+ +V + L + G+ ++A + ++ +E +G
Sbjct: 398 VLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRLSRTGKSDEANDFMNNLEASG 457
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGA 497
C PD KTW LI+GHCAA ++D+A C KM+EK + A LD+++NG+ +K A
Sbjct: 458 CNPDNKTWASLIEGHCAAGDLDKASDCIHKMVEKGGVPSAAYALDLIVNGYCQKKHETDA 517
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
LL ++++K +L+P +T+KTLI KLL ++A+ LL +M+ +PPF EPF+ Y+S
Sbjct: 518 SHLLFDLVDKSQLKPRHSTYKTLINKLLLCGEFKDALKLLGMMRNHEFPPFIEPFISYVS 577
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
K GT +D EFLK ++ K++PS+ LQ+FE+FF GRH +A+DLL KCP +IR + +
Sbjct: 578 KSGTADDGLEFLKGMTSKKFPSTTVVLQLFEAFFQAGRHGDAQDLLLKCPGYIRNHADVL 637
Query: 618 LLFGSAK 624
LF S K
Sbjct: 638 DLFCSMK 644
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/410 (20%), Positives = 169/410 (41%), Gaps = 18/410 (4%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+VD++ S D+I K LE + +S + VL VL +L P A+ FF WV G K
Sbjct: 87 VIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNPDDAIRFFDWVSGDYGEKL 146
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++ ++N +L +L + V+ FW++ +MKK+GY M K+ +F K + +A KL
Sbjct: 147 SSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDKVLEKFDKDGLKSEAEKLR 206
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ G S + + + N + ++ + S + + K + + +
Sbjct: 207 DMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPA 266
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K F + ++ F+ D TY+ + L + + V+DEM G +++
Sbjct: 267 KAYIF-----FLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVVDEMRSQGYKMEME 321
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN-----GAYK 499
T+T ++ C ++ A+ + M D L L+ ++ + A K
Sbjct: 322 TFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAVSEQFDLDLFSRALK 381
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYI 556
+ E ++ + ++ L R E +L +MK+ Y +
Sbjct: 382 IFSESGNVLK----DSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSGGLKRKVAYRL 437
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
S+ G ++A++F+ L P + + + E G +A D ++K
Sbjct: 438 SRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 487
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W +++E +L ++S + + V +L L DP KA FF W+ + F+ Y+ M
Sbjct: 234 WGEDVEQQLRDMSVSFSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMAT 293
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILG 172
L +D + +FW + M+ +E ET+ +LG
Sbjct: 294 VLGREDCIDRFWKVVDEMRSQGYKMEMETFTKVLG 328
>gi|224077560|ref|XP_002305302.1| predicted protein [Populus trichocarpa]
gi|222848266|gb|EEE85813.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 189/547 (34%), Positives = 307/547 (56%), Gaps = 3/547 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
D++ +LE S ++H+ V+ VL+ L++ PE A FF+WV +K R SS Y+ ML L
Sbjct: 71 DDISKELELNSVVISHDLVLKVLKSLESKPEVAKRFFDWVLEKDSGRLSSKSYNWMLGIL 130
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMVKEIA 198
+ +FW + +MK + T + +K DL L F G V +
Sbjct: 131 GVNGLVVEFWDLVDKMKIKGHGVSGVTRDRVQEKFEKEGLNDDLEKLKGVFAKGSVDN-S 189
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++ + + +V W + + +++ + E S + V VL+ L + PVKAL FFRWV +
Sbjct: 190 VEKIGLRVSRIVRNKVWGEDVEGEIKHLCAEFSSDLVKIVLEHLVMEPVKALIFFRWVED 249
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
KH+ +YN + RVL R + + FW V++EM+ G+EM+ T+ + +F +M++
Sbjct: 250 SELCKHDGRSYNAMARVLGREDCIDRFWKVIDEMRSNGFEMETGTFDTVLARFMSRKMIK 309
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A+ L+EF M G KPS + C+ LLR I D+GL RV + GN L+ ++ D
Sbjct: 310 EAIDLYEFAMTGANKPSAKCCTYLLRKIVVGKQLDMGLFSRVVEIFTGHGNVLTDAMLDA 369
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ +ALT +G+F E K+++ MK AGF ++ FGL AG+ ++A ++ ME +G
Sbjct: 370 VLKALTNVGKFGECNKVLREMKVAGFVASGNLQRKIAFGLTSAGKNDEANEFVNHMESSG 429
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGA 497
K W LI+GHC + ++++A CF M+EK + A +++L+N + + R A
Sbjct: 430 RDLSYKAWASLIEGHCVSGDLEKASDCFKIMVEKKGVSGAGYAVELLVNAYCLKNRAMDA 489
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
LL + + + L PWQ T+K LI KLL ++A+NLL LM+ PPF +PF +++S
Sbjct: 490 CNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFKDALNLLGLMQSHGIPPFIDPFFEFVS 549
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
K GT +DA F+ A++ K++PS + L++F++FF RH EA+D L KCP +IR + +
Sbjct: 550 KSGTGDDAIAFMNAMTTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPIYIRNRADVL 609
Query: 618 LLFGSAK 624
LF S K
Sbjct: 610 NLFCSKK 616
>gi|90657573|gb|ABD96873.1| hypothetical protein [Cleome spinosa]
Length = 666
Score = 336 bits (861), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 310/557 (55%), Gaps = 6/557 (1%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE++ L+ + H+ + VLR L + P+ A FF WV + + SS Y++MLR L
Sbjct: 104 DEIKKLLDLSGIVINHDLGLKVLRGLQSRPDAAKRFFQWVTEADAAKLSSKSYNMMLRIL 163
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ +FW + MK+ + + +K DL L + + +
Sbjct: 164 GVNGFVDEFWGLVVDMKKKGYGVSANVRDKVGEKFQKDGLQGDLERLKELFASGSMDNSA 223
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ V + +VL +W D + K+L D+K+E V +++L + P KAL FFRW+ E
Sbjct: 224 EKVCHRVCKIVLKEEWSDDVEKRLRDLKVEFQSELVKMAVEKLDMEPRKALLFFRWIDES 283
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN I RVL R + + F N++EEM+ G+EM+++TY ++S +F + +++++
Sbjct: 284 GLFKHDEGTYNAIARVLGREKFLDRFRNIIEEMRGAGHEMEMETYARVSARFCQTKLIKE 343
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV+LFEF M G P+ C LLL+ I + ++GL RV Y GN+L+ ++ + +
Sbjct: 344 AVELFEFAMAGSNTPTPHCCILLLKKIVTAKELEMGLFSRVVKAYTESGNALTDTMLNSV 403
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+++ + RFD++ +++K MK G+ P S + GL + G+ ++A + + ME +G
Sbjct: 404 LKSIRSVDRFDQSNEVLKVMKEGGYIPGGGLQSVIASGLSRKGKKDEAKELENFMEASGN 463
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD-LLDVLINGFLSQKRVNGAY 498
D K L++GHC A E+++A CF M+ K + A + L+ + ++ + Y
Sbjct: 464 NLDDKALASLVEGHCYAGELEQASECFKNMVGKEGVSYAGYTFERLVLAYCNKNQTRDGY 523
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARR-----LEEAMNLLRLMKKQNYPPFPEPFV 553
KL V +++ +L+PW +T+K L+ LL + EEA++LL +MK +PPF +PFV
Sbjct: 524 KLFVALVKGNQLKPWHSTYKILVRNLLTKKMARDGGFEEALSLLPMMKDHGFPPFVDPFV 583
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
Y+S+ G+ A FLKA++ K++PS+ ++VFE+ GRH EA+DLL CP +IR
Sbjct: 584 DYVSRTGSRAQAFAFLKAMTSKKFPSTTIVIRVFEAMLKSGRHSEAQDLLSMCPKYIRGH 643
Query: 614 SKISLLFGSAKSNKVTI 630
+ + LF S K + ++
Sbjct: 644 ADVLELFNSMKPGECSV 660
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 175/416 (42%), Gaps = 40/416 (9%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
T++DV D+I K L+ I ++ + L VL+ L+ P A FF+WV E K
Sbjct: 92 TVIDVFSRLSDKDEIKKLLDLSGIVINHDLGLKVLRGLQSRPDAAKRFFQWVTEADAAKL 151
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++ +YN +LR+L + V +FW +V +MKK+GY + + K+ +FQK + D +L
Sbjct: 152 SSKSYNMMLRILGVNGFVDEFWGLVVDMKKKGYGVSANVRDKVGEKFQKDGLQGDLERLK 211
Query: 325 EFMMDGPYKPSVQD-----CSLLLRSISSINNP----DLGLVFR---VANKYESLGNSLS 372
E G S + C ++L+ S + DL + F+ V E L
Sbjct: 212 ELFASGSMDNSAEKVCHRVCKIVLKEEWSDDVEKRLRDLKVEFQSELVKMAVEKLDMEPR 271
Query: 373 KSV------------------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
K++ Y+ I R L + D +++ M+ AG E + TY++V
Sbjct: 272 KALLFFRWIDESGLFKHDEGTYNAIARVLGREKFLDRFRNIIEEMRGAGHEMEMETYARV 331
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
C+ ++A + + P +L++ A E++ L F+++++
Sbjct: 332 SARFCQTKLIKEAVELFEFAMAGSNTPTPHCCILLLKKIVTAKELEMGL--FSRVVKAYT 389
Query: 475 DADADLLDVLINGFL----SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
++ L D ++N L S R + + ++L M E + P + L +
Sbjct: 390 ESGNALTDTMLNSVLKSIRSVDRFDQSNEVLKVMKEGGYI-PGGGLQSVIASGLSRKGKK 448
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAY 583
+EA L M+ + + G +E ASE K + KE S A Y
Sbjct: 449 DEAKELENFMEASGNNLDDKALASLVEGHCYAGELEQASECFKNMVGKEGVSYAGY 504
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 46 QSHTSQFHINTCQKIFFSTSPNSSLE--------LILACDWSDELENKLEELSPKLTHES 97
Q Q + +++F S S ++S E ++L +WSD++E +L +L + E
Sbjct: 199 QKDGLQGDLERLKELFASGSMDNSAEKVCHRVCKIVLKEEWSDDVEKRLRDLKVEFQSEL 258
Query: 98 VVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
V + KLD +P KA FF W+ + F+ Y+ + R L + L +F + M+
Sbjct: 259 VKMAVEKLDMEPRKALLFFRWIDESGLFKHDEGTYNAIARVLGREKFLDRFRNIIEEMRG 318
Query: 158 DHCYIEEETYLSI 170
+E ETY +
Sbjct: 319 AGHEMEMETYARV 331
>gi|297828702|ref|XP_002882233.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328073|gb|EFH58492.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 667
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/557 (32%), Positives = 315/557 (56%), Gaps = 6/557 (1%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
D++ +L+ ++HE + VLR+L++ P+ A +FF WV + + SS Y+ MLR L
Sbjct: 99 DDIRKELDSNDVVISHELALRVLRELESSPDVAGSFFKWVLEAYPRKLSSKSYNTMLRIL 158
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ +FW + MK+ + + +K SDL L + + ++
Sbjct: 159 GVNGLVDEFWELVDAMKKKGHGVSANVRNKVGDKFQKDGLESDLERLKEIFASGSMDNSV 218
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
D V + +V+ W + K+L D+K+E + V VL++L + P KAL FFRW+ E
Sbjct: 219 DKVCNRVCKIVMKEVWSADVEKQLRDLKLEFKTDLVKMVLEKLDVDPRKALLFFRWIDES 278
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + RVL + + + F +++EE++ GYEM+++TY+++S +F + +M+++
Sbjct: 279 GSFKHDEKTYNAMARVLGKEKFLDRFQHIIEEIRSAGYEMEMETYVRVSARFCQTKMIKE 338
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV+LFEF M G P+ CSLLL+ I S D+ L R Y GN + S+ +
Sbjct: 339 AVELFEFAMAGSNTPTPHCCSLLLKKIVSAKKLDMDLFTRTVKAYTGNGNVVPDSMLQHV 398
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++L + RF ++ +++KAM G+ P S + GL + G+ ++A +++ ME +G
Sbjct: 399 LKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASGLSRKGKKDEANELVNFMEASGN 458
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGAY 498
D K L++GHC A +++ A CF KM+ K + A + L+ + + + Y
Sbjct: 459 HLDDKAMASLVEGHCDAKDLEEASECFNKMIGKEGVSYAGYAFEKLVLAYCNSFQARDVY 518
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLEEAMNLLRLMKKQNYPPFPEPFV 553
KL E++++ +L+PW +T+K ++ LL + EEA++LL +MK +PPF +PF+
Sbjct: 519 KLFTELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFEEALSLLPMMKNHGFPPFVDPFM 578
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
Y+S GT +A FLKA++ K++PS++ L+VFE+ RH EA+DLL P +IR++
Sbjct: 579 DYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAMLKSARHSEAQDLLSMSPSYIRRN 638
Query: 614 SKISLLFGSAKSNKVTI 630
+++ LF S K +K ++
Sbjct: 639 AEVLELFNSMKPDKCSL 655
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
++D+ D I K+L+ + +S L VL+EL P A FF+WV E K
Sbjct: 87 VVIDIFSRLSAKDDIRKELDSNDVVISHELALRVLRELESSPDVAGSFFKWVLEAYPRKL 146
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++ +YN +LR+L + V +FW +V+ MKK+G+ + + K+ +FQK + D +L
Sbjct: 147 SSKSYNTMLRILGVNGLVDEFWELVDAMKKKGHGVSANVRNKVGDKFQKDGLESDLERLK 206
Query: 325 EFMMDGPYKPSVQD-----CSLLLRSISSINNP----DLGLVFR---VANKYESLGNSLS 372
E G SV C ++++ + S + DL L F+ V E L
Sbjct: 207 EIFASGSMDNSVDKVCNRVCKIVMKEVWSADVEKQLRDLKLEFKTDLVKMVLEKLDVDPR 266
Query: 373 KSV------------------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
K++ Y+ + R L K D + +++ +++AG+E + TY +V
Sbjct: 267 KALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHIIEEIRSAGYEMEMETYVRV 326
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
C+ ++A + + P ++L++ +A ++D L
Sbjct: 327 SARFCQTKMIKEAVELFEFAMAGSNTPTPHCCSLLLKKIVSAKKLDMDLF 376
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 67/140 (47%), Gaps = 8/140 (5%)
Query: 58 QKIFFSTSPNSSLE--------LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDP 109
++IF S S ++S++ +++ WS ++E +L +L + + V VL KLD DP
Sbjct: 206 KEIFASGSMDNSVDKVCNRVCKIVMKEVWSADVEKQLRDLKLEFKTDLVKMVLEKLDVDP 265
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
KA FF W+ + F+ Y+ M R L + L +F + ++ +E ETY+
Sbjct: 266 RKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHIIEEIRSAGYEMEMETYVR 325
Query: 170 ILGVLKKAKKASDLAALNQF 189
+ + K + L +F
Sbjct: 326 VSARFCQTKMIKEAVELFEF 345
>gi|15232917|ref|NP_186898.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264846|sp|Q9M891.1|PP208_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g02490, mitochondrial; Flags: Precursor
gi|6957712|gb|AAF32456.1| unknown protein [Arabidopsis thaliana]
gi|51536500|gb|AAU05488.1| At3g02490 [Arabidopsis thaliana]
gi|56381951|gb|AAV85694.1| At3g02490 [Arabidopsis thaliana]
gi|332640296|gb|AEE73817.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 665
Score = 319 bits (817), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 337/639 (52%), Gaps = 31/639 (4%)
Query: 23 SSTRPLFTRVTHFFHISSFTASNQSHTSQ-FHINTCQKIFFSTSPNSS------------ 69
SS RP + + F IS+ T S S + F + Q +F SP +S
Sbjct: 15 SSPRPFLSHHSRFQVISNSTRSFSSFLHERFGVQQRQCLFALRSPLASSVSRRFSSESAI 74
Query: 70 ----------LELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWV 119
+++ + DE+ +L+ ++HE + VLR+L++ P+ A FF W
Sbjct: 75 EEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWG 134
Query: 120 CDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
+ + SS Y+ MLR + +FW + MK+ + + KK
Sbjct: 135 LEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGL 194
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
+DL L + + ++D V + +V+ W + K+L D+K+E + V VL
Sbjct: 195 ENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVL 254
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
++L + P KAL FFRW+ E +KH+ TYN + RVL + + + F +++EE++ GYEM
Sbjct: 255 EKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEM 314
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK--PSVQDCSLLLRSISSINNPDLGLV 357
+++TY+++S +F + +M+++AV+LFEF M G P+ CSLLL+ I + D+ L
Sbjct: 315 EMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLF 374
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
R Y GN + + + ++L + RF ++ +++KAM G+ P S + G
Sbjct: 375 TRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASG 434
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L + G+ ++A +++ ME +G D K L++GHC A +++ A CF KM+ K +
Sbjct: 435 LSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSY 494
Query: 478 ADL-LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLE 531
A + L+ + + + YKL E++++ +L+PW +T+K ++ LL + E
Sbjct: 495 AGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFE 554
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
EA++LL +M+ +PPF +PF+ Y+S GT +A FLKA++ K++PS++ L+VFE+
Sbjct: 555 EALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAML 614
Query: 592 NEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTI 630
RH EA+DLL P +IR+++++ LF + K K ++
Sbjct: 615 KSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKPEKCSL 653
>gi|297807625|ref|XP_002871696.1| hypothetical protein ARALYDRAFT_488448 [Arabidopsis lyrata subsp.
lyrata]
gi|297317533|gb|EFH47955.1| hypothetical protein ARALYDRAFT_488448 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 317 bits (811), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 184/586 (31%), Positives = 320/586 (54%), Gaps = 17/586 (2%)
Query: 62 FSTSP----NSSLELILACDWS-----DELENKLEELSPKLTHESVVYVLRKLDNDPEKA 112
FS+ P SS E+I+ +S D++ +LE ++H+ + VLRKL+++P+ A
Sbjct: 15 FSSEPAVEEKSSAEVIVIDIFSRLSGEDDIRKELESSDVVISHDLALKVLRKLESNPDVA 74
Query: 113 SAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILG 172
FF W+ + SS Y++MLR L + +FW + MK+ + +
Sbjct: 75 KRFFQWIKEASPEELSSKNYNMMLRILGGNGLVNEFWGLVDVMKKKGHGLSANVRDKVGE 134
Query: 173 VLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD 232
+K SDL L + + + +NV + +V+ +W D + K++ D+ +E
Sbjct: 135 KFQKDGLESDLVRLRKLFASDCLDSSAENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKS 194
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ V +++ L + P KAL FFRW+ E +K++ TYN + RVL + + + F N+VEEM
Sbjct: 195 DLVKMIVESLDVVPRKALLFFRWIDESGLFKNDEKTYNAMARVLGKEKFLDRFQNIVEEM 254
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSIN 350
+ GYE++I+TY+++S +F + +++++AV LFE M G KP+ Q LLL+ I +
Sbjct: 255 RSVGYEVEIETYVRVSTRFCQTKLIKEAVDLFEIAMAGSSSNKPTPQCFCLLLKKIVTAK 314
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D+ L R Y GN+++ S+ + ++L + R + + +++K MK G+ P +
Sbjct: 315 ILDMDLFSRALKAYTRNGNAMTDSLLKSVLKSLRSVDRVELSTELLKEMKKGGYVPSSDM 374
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
S + L + G+ ++A +D ME +G D K L++G+C + ++D AL+CF KM+
Sbjct: 375 QSMIASSLSRKGKKDEADEFVDFMEASGNNLDDKAMASLVEGYCDSGDLDEALVCFEKMV 434
Query: 471 -EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR- 528
+ L+ + ++ +V AYKLL ++K +L+P +T+K L+ LL +
Sbjct: 435 GYAAAFYADYAFEKLVLAYCNKNQVRDAYKLLSAQVQKNQLKPRHSTYKILVTNLLTKKI 494
Query: 529 ----RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYL 584
EEA++LL +MK +PPF +PF+ Y S G +A FLKA++ K +PS + L
Sbjct: 495 ARDGGFEEALSLLPIMKDHGFPPFIDPFMSYFSTTGKSTEALGFLKAMTSKNFPSMSVVL 554
Query: 585 QVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTI 630
+VFE+ RH EA+DLL CP++IR + + LF + K N+ T+
Sbjct: 555 RVFETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESTV 600
>gi|224077566|ref|XP_002305305.1| predicted protein [Populus trichocarpa]
gi|222848269|gb|EEE85816.1| predicted protein [Populus trichocarpa]
Length = 646
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 187/553 (33%), Positives = 300/553 (54%), Gaps = 17/553 (3%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
D++ +LE S ++H+ V+ VL+ L++ PE A FF+WV +K R SS Y+ ML L
Sbjct: 102 DDISKELELNSVVISHDLVLKVLKSLESKPEVAKRFFDWVLEKDSGRLSSKSYNWMLGIL 161
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMVKEIA 198
+ +FW + +MK + T + +K DL L F G V +
Sbjct: 162 GVNGLVVEFWDLVDKMKIKGHGVSGVTRDRVQEKFEKEGLNDDLEKLKGVFAKGSVDN-S 220
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++ + + +V W + + +++ + E S + V VL+ L + PVKAL FFRWV +
Sbjct: 221 VEKIGLRVSRIVRNKVWGEDVEGEIKHLCAEFSSDLVKIVLEHLVMEPVKALIFFRWVED 280
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
KH+ +YN + RVL R + + FW K G T+ + +F +M++
Sbjct: 281 SELCKHDGRSYNAMARVLGREDCIDRFW-------KTG------TFDTVLARFMSRKMIK 327
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A+ L+EF M G KPS + C+ LLR I D+GL RV + GN L+ ++ D
Sbjct: 328 EAIDLYEFAMTGANKPSAKCCTYLLRKIVVGKQLDMGLFSRVVEIFTGHGNVLTDAMLDA 387
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ +ALT +G+F E K+++ MK AGF ++ FGL AG+ ++A ++ ME +G
Sbjct: 388 VLKALTNVGKFGECNKVLREMKVAGFVASGNLQRKIAFGLTSAGKNDEANEFVNHMESSG 447
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGA 497
K W LI+GHC + ++++A CF M+EK + A +++L+N + + A
Sbjct: 448 RDLSYKAWASLIEGHCVSGDLEKASDCFKIMVEKKGVSGAGYAVELLVNAYCLKNTAMDA 507
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
LL + + + L PWQ T+K LI KLL ++A+NLL LM+ PPF +PF +++S
Sbjct: 508 CNLLCDYVCQNHLCPWQTTYKVLISKLLVQGAFKDALNLLGLMQSHGIPPFIDPFFEFVS 567
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
K GT +DA F+ A++ K++PS + L++F++FF RH EA+D L KCP +IR + +
Sbjct: 568 KSGTGDDAIAFMNAMTTKKFPSISVALRMFKAFFKAKRHGEAQDFLSKCPIYIRNRADVL 627
Query: 618 LLFGSAK-SNKVT 629
LF S K SN T
Sbjct: 628 NLFCSKKFSNDTT 640
>gi|22326834|ref|NP_197102.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75246487|sp|Q8LPF1.1|PP387_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15980, mitochondrial; Flags: Precursor
gi|20856902|gb|AAM26690.1| AT5g15980/F1N13_120 [Arabidopsis thaliana]
gi|25090366|gb|AAN72285.1| At5g15980/F1N13_120 [Arabidopsis thaliana]
gi|332004849|gb|AED92232.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 668
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 304/560 (54%), Gaps = 9/560 (1%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE+ +LE ++ + + VLRKL+++P+ A +FF W+ + SS Y++MLR L
Sbjct: 101 DEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRIL 160
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ +FW + MK+ + + +K SDL L + + +
Sbjct: 161 GGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSA 220
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+NV + +V+ +W D + K++ D+ +E + V +++ L + P KAL FFRW+ E
Sbjct: 221 ENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDES 280
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + RVL + + + F N+V EM+ GYE++I+TY+++S +F + +++++
Sbjct: 281 DLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKE 340
Query: 320 AVKLFEFMMDGPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
AV LFE M G P+ LLL+ I + D+ L R Y GN+L+ S+
Sbjct: 341 AVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLL 400
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ ++L + R +++ +++K MK G+ P S + L + G+ ++A +D ME
Sbjct: 401 KSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMES 460
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVN 495
+G D K L++G+C + +D AL+CF KM+ + AD + L+ + ++ +V
Sbjct: 461 SGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVR 520
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLEEAMNLLRLMKKQNYPPFPE 550
AYKLL + K +L+P +T+K+L+ LL + EEA++LL +MK +PPF +
Sbjct: 521 DAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFID 580
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610
PF+ Y S G +A FLKA++ +P + L+VFE+ RH EA+DLL CP++I
Sbjct: 581 PFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYI 640
Query: 611 RQDSKISLLFGSAKSNKVTI 630
R + + LF + K N+ +
Sbjct: 641 RNNPDVLELFNTMKPNESAV 660
>gi|9755644|emb|CAC01797.1| putative protein [Arabidopsis thaliana]
Length = 645
Score = 310 bits (795), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 304/560 (54%), Gaps = 9/560 (1%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE+ +LE ++ + + VLRKL+++P+ A +FF W+ + SS Y++MLR L
Sbjct: 78 DEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRIL 137
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ +FW + MK+ + + +K SDL L + + +
Sbjct: 138 GGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSA 197
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+NV + +V+ +W D + K++ D+ +E + V +++ L + P KAL FFRW+ E
Sbjct: 198 ENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDES 257
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + RVL + + + F N+V EM+ GYE++I+TY+++S +F + +++++
Sbjct: 258 DLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKE 317
Query: 320 AVKLFEFMMDGPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
AV LFE M G P+ LLL+ I + D+ L R Y GN+L+ S+
Sbjct: 318 AVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLL 377
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ ++L + R +++ +++K MK G+ P S + L + G+ ++A +D ME
Sbjct: 378 KSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMES 437
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVN 495
+G D K L++G+C + +D AL+CF KM+ + AD + L+ + ++ +V
Sbjct: 438 SGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVR 497
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLEEAMNLLRLMKKQNYPPFPE 550
AYKLL + K +L+P +T+K+L+ LL + EEA++LL +MK +PPF +
Sbjct: 498 DAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFID 557
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610
PF+ Y S G +A FLKA++ +P + L+VFE+ RH EA+DLL CP++I
Sbjct: 558 PFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYI 617
Query: 611 RQDSKISLLFGSAKSNKVTI 630
R + + LF + K N+ +
Sbjct: 618 RNNPDVLELFNTMKPNESAV 637
>gi|242060886|ref|XP_002451732.1| hypothetical protein SORBIDRAFT_04g006810 [Sorghum bicolor]
gi|241931563|gb|EES04708.1| hypothetical protein SORBIDRAFT_04g006810 [Sorghum bicolor]
Length = 608
Score = 251 bits (642), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 160/541 (29%), Positives = 275/541 (50%), Gaps = 12/541 (2%)
Query: 93 LTHESVVYVL---RKLDNDPEKASAFFNWVCDKKQFRP--SSTVYSLMLRNLVNKDSLKQ 147
L+H V L L + AS FF+W + +S ++ ML+ ++
Sbjct: 59 LSHPDTVPALLLDPGLAGNYPAASRFFSWAASDPAAKAALNSRSFNSMLQLAAAHGDAER 118
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
FW + M+ I + + + + A D L + A V K L
Sbjct: 119 FWSLVTSMRSKGYGISKPAFRAASESFRAKDMARDADLLQDAFAAHGRNAAAAEVCKILR 178
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN-T 266
G D D L + ++E+++ V V++++ +P +A+ FF+WV + +G
Sbjct: 179 --APGKD-DSSNLAMLSESRVEVTEELVALVVEKVGQFPRQAMVFFQWVEKSAGSGICWG 235
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
YN + +VL R + + +F V+ +M+ +G EMD D Y+ ++ +F K +M+EDAV LF F
Sbjct: 236 KVYNPMAKVLGREDCIEEFREVLRKMRGKGLEMDRDVYVTVTDRFFKRKMVEDAVDLFRF 295
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M P K S +D + L+ + + DL LV RV + Y+ GN + +D + ++L +
Sbjct: 296 MASRPEKLSKEDFVVFLKKVVVTGDLDLKLVTRVVSYYQHAGNEVKALAFDSVLKSLRSV 355
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R E+ +++ AMK GF P + + + I +C AG E+A + ++EE+G K W
Sbjct: 356 ARLGESGRVLMAMKEGGFAPHTVDHEKAILAMCDAGNLEEAHKYMADVEESGHKLGSKVW 415
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADL---LDVLINGFLSQKRVNGAYKLLVE 503
+ L+Q + VD A+ CF +M+E++ + + ++ L+ L++G +K A+K+L
Sbjct: 416 SSLVQKYSLGENVDTAVSCFHEMLERSGNDNENVGSALEALVSGLCKKKGAKEAFKVLKN 475
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE 563
++ K + PWQ T+K LI L+ L++A +L LMK YP F +P + +ISK GTV+
Sbjct: 476 LVSKKIVVPWQTTYKYLIHNLIRQGHLKQAFEVLGLMKSHGYPSFIDPCITHISKSGTVD 535
Query: 564 DASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623
DA L A S K PS A+L++F++ E RH A+ LL + P I+ + + +F
Sbjct: 536 DALGLLNATSSKGLPSRTAHLRLFQALLKEDRHEVAQQLLSQSPASIQNHADVRDIFSRI 595
Query: 624 K 624
K
Sbjct: 596 K 596
>gi|298204416|emb|CBI16896.3| unnamed protein product [Vitis vinifera]
Length = 472
Score = 235 bits (600), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 206/362 (56%), Gaps = 2/362 (0%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE++N++E ++HE V+ VL L+++PE A + F+WV + R SS Y+LML L
Sbjct: 97 DEIKNEVESSDIVVSHELVLKVLENLESNPEVARSVFDWVLRAESERLSSKSYNLMLGIL 156
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMVKEIA 198
+ + +FW + MK+ + + Y+ L +K SDL L F G V + +
Sbjct: 157 GSNGFVSEFWDLVEVMKKKGYGVSKAAYVKALENFEKEALGSDLEKLRGLFASGSVDD-S 215
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ + + ++ W D + +L ++K+ S + V VL+ L + P+KAL FFRWV E
Sbjct: 216 IQKICSRVSKIIRSEVWGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEE 275
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
KH+ TYN +LRVL R + + FW V +EM+ GYEM++ TY K+ +F K +M++
Sbjct: 276 SDLVKHDKQTYNAMLRVLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIK 335
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ V L+EF M G KPS+ DC+ LLR I D+ L RV Y GN L+KS+ D
Sbjct: 336 EVVDLYEFAMSGANKPSMYDCTFLLRKIVVSKVLDISLFSRVVRTYTEGGNILTKSMLDA 395
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I ++LT +GRF E K++KAM+ G+ + +++ FGL A + ++A ++ ME++
Sbjct: 396 ILKSLTSVGRFGECNKLLKAMEEGGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSD 455
Query: 439 CI 440
C+
Sbjct: 456 CL 457
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 52/112 (46%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W D +E +L L + + V VL L +P KA FF WV + + Y+ MLR
Sbjct: 232 WGDNVEGQLHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLR 291
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF 189
L +D +++FW M+ +E TY ++G K K ++ L +F
Sbjct: 292 VLGREDCIERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEF 343
>gi|62321124|dbj|BAD94238.1| hypothetical protein [Arabidopsis thaliana]
Length = 291
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 156/283 (55%), Gaps = 6/283 (2%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+ L R Y GN+L+ S+ + ++L + R +++ +++K MK G+ P S
Sbjct: 1 MDLFSRAVKVYTKNGNALTDSLLKSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSM 60
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ L + G+ ++A +D ME +G D K L++G+C + +D AL+CF KM+
Sbjct: 61 IASSLSRKGKKDEADEFVDFMESSGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNT 120
Query: 474 YDADADL-LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR---- 528
+ AD + L+ + ++ +V AYKLL + K +L+P +T+K+L+ LL +
Sbjct: 121 GVSYADYSFEKLVLAYCNKNQVRDAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARD 180
Query: 529 -RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVF 587
EEA++LL +MK +PPF +PF+ Y S G +A FLKA++ +P + L+VF
Sbjct: 181 GGFEEALSLLPIMKDHGFPPFIDPFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVF 240
Query: 588 ESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTI 630
E+ RH EA+DLL CP++IR + + LF + K N+ +
Sbjct: 241 ETMMKSARHSEAQDLLSLCPNYIRNNPDVLELFNTMKPNESAV 283
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/410 (28%), Positives = 194/410 (47%), Gaps = 11/410 (2%)
Query: 201 NVAKTLVDVVL-GSDWD-DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++ +T+ DV L GS W I L + ++ + V VL+ L++ A+ FFRW GE
Sbjct: 53 SIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGT-AISFFRWAGE 111
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G++H+ TYN ++ +L ++ + + EEM K G + ++ + R F + R +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYD 377
DAV FE M KP + +L+ + + F V ++ ++G ++++
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDE--KAFEVFHEMMAMGFVPPDRALHT 229
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ R L K R EA ++ M+ GF PD I Y+ +I GL KAG ++A VLD M
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAK 289
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C+P T+ IL+ C A ++RA F M + ++ + LI+GF R+ A
Sbjct: 290 ACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEA 349
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
L EM+E RP T +I+ L + E+A M + P + +Q
Sbjct: 350 CSLFDEMVE-AGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQ 408
Query: 555 YISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+SK G V +A +K + +P S Y+ + + F GR EA LL
Sbjct: 409 GLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLL 458
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 203/495 (41%), Gaps = 44/495 (8%)
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRR 154
H ++V L K E F +K F P + Y+ M+ L ++ L
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 155 MKEDHCYIEEETY------LSILGVLKKAKKASDLAALNQFH----------DGMVKEIA 198
M C E TY L G L++A++ + A + F G K
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
M ++V D I + + S NF A F +
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF-----------EQAAKSFEEMM-- 392
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G K N +TY I++ L++ V + + +++ M G D TYI + F K ++
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSV 375
+A +L + + P++Q S L++ + S+ N L + E+L L S+
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSI 512
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA--GRFEDACNVLDE 433
G L K GR DEA ++ + M + G +PD TY+ +I GLC++ R E A +L +
Sbjct: 513 IVG----LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+E G +PD T+T L G C EVDRA+ + + ++AD L G Q +
Sbjct: 569 LEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
V+ A L EM+ + P A + +I L+ ++LE+A M + P +
Sbjct: 629 VDRAVSLFQEMVRQGG-APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYT 687
Query: 553 --VQYISKFGTVEDA 565
VQ + G V++A
Sbjct: 688 ALVQALCHAGNVDEA 702
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 124/573 (21%), Positives = 234/573 (40%), Gaps = 67/573 (11%)
Query: 78 WS-DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
WS + N L + ++ V VLR L A +FF W ++ F+ Y+ ++
Sbjct: 68 WSVHNIRNVLGPVHGQVLGSHVAAVLRSL-KVTGTAISFFRWAGEQAGFQHDVFTYNCLM 126
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
LV + + Q + M + ++ ++ + ++A D A+ F K
Sbjct: 127 NLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD--AVTCFEIMKRKR 184
Query: 197 IAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKI--------ELSDNFVLTVLKELRIYPV 247
D + LVD + + D+K + +M L V T+LK R+
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE---------------- 291
+ + F + E G+ + I YN ++ LA+ ++ V++
Sbjct: 245 REV-FGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 292 -------------------MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
M G+ + Y + F K M++A LF+ M++ Y
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRF 389
+P V ++++ + N + + A +E + G + Y I + L+K+GR
Sbjct: 362 RPDVITHTVMIDGLCKSGNFE-----QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRV 416
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
A ++MK M G PD++TY ++ G CK GR ++A +LDE+++ P+++ ++ L
Sbjct: 417 ANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSL 476
Query: 450 IQGHCAANEVDRAL-LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
++G C V+ L F + + D L +I G R++ A ++ M+ +
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSE- 535
Query: 509 RLRPWQATFKTLIEKLLGAR--RLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVE 563
+P T+ LI L +R R+E A LL ++ Y P P + K G V+
Sbjct: 536 GCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVD 595
Query: 564 DASEFLKALSVKEYPSS-AAYLQVFESFFNEGR 595
A + L+ S + + + AY + +G+
Sbjct: 596 RAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 195/515 (37%), Gaps = 72/515 (13%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+ + S+++ K E S F V + +RP +++M+ L + +Q +
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMV--EAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M C TY +I+ L K + + N F ++K + V +
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVA-----NAFR--IMKGMIAHGCFPDSVTYICL 441
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
D K+G+ E ++ L EL + N Y+ +
Sbjct: 442 LDGFCKLGRLDEAAQL----------LDEL---------------DKCSSSPNLQLYSSL 476
Query: 273 LRVLARHESVRDFWN-VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ L SV + + + E+ K +D I K +++A ++F+ M+
Sbjct: 477 VKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
KP ++L+ + + F + + E +G Y + L K+G D
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAG----------------------------- 422
A KM++ + G+ D + Y+ + GLC G
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 423 ------RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
+ EDAC DEM G P + T+T L+Q C A VD A F M+ +
Sbjct: 657 GLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELV 716
Query: 477 DADLL-DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ ++ D LI+GF +V+ A KL +MI + + P T +L + L+ + + E+A
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV-PTAVTSASLFDGLVRSGKTEKAQE 775
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
LL+ M PP F + +++ + LK
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 111/286 (38%), Gaps = 42/286 (14%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E GY + +TY + L + V ++EE G+ D+ Y + +
Sbjct: 570 EMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ AV LF+ M+ G + + Y
Sbjct: 630 DRAVSLFQEMV-------------------------------------RQGGAPDAAAYC 652
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L K + ++A K M G +P TY+ ++ LC AG ++A + + M
Sbjct: 653 CIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLAR 712
Query: 438 G-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + + LI G C A +VD AL F M+ + A L +G + +
Sbjct: 713 GELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
A +LL EM P ATF +++ G R+ +E+ LL+L+++
Sbjct: 773 AQELLQEMAAGGS-PPHAATFTAILD---GLRKSDESGKLLKLVQE 814
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/373 (26%), Positives = 179/373 (47%), Gaps = 11/373 (2%)
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
Y KAL +R +G+ SG + +T T+N ++ + + V W + EEM+ + ++ TY
Sbjct: 104 YTQKALAVYRVMGQ-SGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITY 162
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ K +E A+K+F M +P++ + ++ + + D F + +
Sbjct: 163 SILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDK--AFFLFEEM 220
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
S G ++ VY+ + L + GR D A K+ + M + G +PD++T++ +++GL AGR
Sbjct: 221 TSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRA 280
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + E + GC D+ + +LI C + +D A F ++ E D + L
Sbjct: 281 SEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNAL 340
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G R++ A+ LL +M ++ P + TLI+ L + R+EEA LL M+
Sbjct: 341 MDGLCKSGRIHDAFILLGDM-KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLG 399
Query: 545 YPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
Y P + I K G +EDA + +S K + ++ Y + GR EA
Sbjct: 400 YEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFANTVTYNTILNGLCMAGRVDEA-- 457
Query: 602 LLYKCPHHIRQDS 614
YK + ++Q++
Sbjct: 458 --YKLFNGMKQET 468
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 134/292 (45%), Gaps = 13/292 (4%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF+WV G + ++ +L + V+ E++K Y + +I+++R +
Sbjct: 5 FFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGY 64
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP--DLGLVFRVANKYESLGN 369
++E +V+ + M+G C+L + +S+ + G + Y +G
Sbjct: 65 ASAGLLEKSVEALK-RMEG------HRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQ 117
Query: 370 SLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
S + ++ + A K R D K+ + M+N P+ ITYS +I +CK G E
Sbjct: 118 SGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEK 177
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V +M+ GC P+I T+T +I G + VD+A F +M + A + + LI+
Sbjct: 178 ALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIH 237
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
G R + A KL EM+ K L+P TF +L+ L A R EA + +
Sbjct: 238 GLGRSGRADAAAKLFREMLSK-GLQPDHVTFTSLVYGLGVAGRASEARRIFQ 288
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 1/198 (0%)
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+L+ S Y+ + A K G +A + + M +G PD T++ ++ KA R +
Sbjct: 86 ALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWK 145
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM+ C P++ T++ILI C V++AL F M + + +I+G
Sbjct: 146 LFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLG 205
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
V+ A+ L EM + L + + +LI L + R + A L R M + P
Sbjct: 206 KSGHVDKAFFLFEEMTSE-GLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDH 264
Query: 550 EPFVQYISKFGTVEDASE 567
F + G ASE
Sbjct: 265 VTFTSLVYGLGVAGRASE 282
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 131/314 (41%), Gaps = 20/314 (6%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
RP+ Y+ M+ L + + + M + Y S++ L ++ +A AA
Sbjct: 191 RPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD--AA 248
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWDDKIGKKLEDMKIELSDNF----VLT 237
F + + K + D+V T + LG + +I ++ D+ L N + T
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ K R+ +A F + E G + T+N ++ L + + D + ++ +MK+ G
Sbjct: 309 LCKSKRLD--EAWEIFGEL-EEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGC 365
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
D+ Y + +K +E+A +L M Y+P V + L+ + L
Sbjct: 366 TPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALR 425
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK----NAGFEPDNITYSQ 413
+ N+++ Y+ I L GR DEA K+ MK + +PD +TY+
Sbjct: 426 LFEEISAKGFANTVT---YNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTT 482
Query: 414 VIFGLCKAGRFEDA 427
++ G +AG E A
Sbjct: 483 LLNGARQAGLSELA 496
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
RF+EAE+++ ++ + + + ++ G AG E + L ME + C +
Sbjct: 34 RFNEAEEVLAEVEKSRYILQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYN 93
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI A +AL + M + D +VL+N F KRV+ +KL EM +
Sbjct: 94 SLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEM-QN 152
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
P T+ LI+ + +E+A+ + MK + P + I G
Sbjct: 153 QNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLG 205
Score = 45.4 bits (106), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 48/237 (20%), Positives = 94/237 (39%), Gaps = 5/237 (2%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L ++ + R G +++ + +K M+ Y+ +I KAG + A V
Sbjct: 52 LQPRIFIELARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV 111
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
M ++G PD T+ +L+ A VD F +M +N + +LI+
Sbjct: 112 YRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCK 171
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
V A K+ ++M + RP T+ ++I+ L + +++A L M +
Sbjct: 172 CGGVEKALKVFLDMKSR-GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRV 230
Query: 548 FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + G + A++ F + LS P + + GR EA+ +
Sbjct: 231 VYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIF 287
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 131/524 (25%), Positives = 233/524 (44%), Gaps = 37/524 (7%)
Query: 62 FSTSPNSSLELILACDWSDELENKL--EELSPK-LTHESVVYVLRKLDNDPEKASAFFNW 118
FS + NS + L E+ N++ SP +TH +++ ++ D ++A + F
Sbjct: 34 FSRAGNSKMVL--------EIANEMLARRFSPDVITHNTILKAYCQI-GDLDRALSHFRG 84
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK 178
K P++ Y +++ L + + + L M + C+ + Y ++ L K
Sbjct: 85 ---KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMG 141
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIE------LS 231
K AA N + + D + T L+ ++ D+ K +E MK ++
Sbjct: 142 KID--AARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 232 DNFVLTVL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
N +L L K+ ++ V L V +G + +T +YN ++ L + ++E
Sbjct: 200 YNALLNGLCKQNQLEEVSKL-LEEMV--EAGREPDTFSYNTVVACLCESGKYEEAGKILE 256
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M ++ D+ TY + F K M++A +L E M+ P+V + L+ S +
Sbjct: 257 KMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRAD 316
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
L +RV G S Y+ + L K G+ +EA ++++ M PD +T
Sbjct: 317 R--LADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVT 374
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
YS ++ GLCK G+ +DA +L+ M E GC P++ T+ +I G C A +VD M
Sbjct: 375 YSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMK 434
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
E + D LI+G+ R+ A+ +L + P +A++ +++E L ++
Sbjct: 435 EVSCTPDVVTYSTLIDGYCKANRMQDAFAIL-------GISPDKASYSSMLEGLCSTGKV 487
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSV 574
EEA ++ LM KQ PP + I VE E LK L V
Sbjct: 488 EEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQV 531
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/264 (33%), Positives = 129/264 (48%), Gaps = 9/264 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +T+N ++ + V + V+E MK+ D+ TY + + K M+DA
Sbjct: 402 GCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDA 461
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
F + P K S S +L + S + V + G + S Y I
Sbjct: 462 ---FAILGISPDKASY---SSMLEGLCSTGKVEEAQ--EVMDLMTKQGCPPTSSHYALII 513
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + R DEA KM++ M G EP+ TYS +I GLCK R EDA NVLD M E GC+
Sbjct: 514 GGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCV 573
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI G C N++D A CF M + + D ++LI+GF V A ++
Sbjct: 574 PDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEV 633
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL 524
+ M+EK P AT+ +L+ L
Sbjct: 634 MQLMLEK-GCNPDAATYFSLMRSL 656
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 165/363 (45%), Gaps = 16/363 (4%)
Query: 248 KALGFFR---WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+AL FR W TY ++ L + + + + + +++EM ++ D Y
Sbjct: 77 RALSHFRGKMWC------SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVY 130
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ K ++ A + + M++ P V + L+ N D ++ K
Sbjct: 131 NCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA--RKLMEKM 188
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ G + Y+ + L K + +E K+++ M AG EPD +Y+ V+ LC++G++
Sbjct: 189 KESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKY 248
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E+A +L++M E C PD+ T+ L+ G C +++D A M+ + L
Sbjct: 249 EEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL 308
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I GF R+ AY+++ +M K + P T+ L++ L A +LEEA LL +M +++
Sbjct: 309 IGGFSRADRLADAYRVMEDMF-KAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKD 367
Query: 545 YPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
P + V + K G V+DA L+ + + P+ + + + F G+ E
Sbjct: 368 CAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGH 427
Query: 601 DLL 603
+L
Sbjct: 428 KVL 430
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 117/485 (24%), Positives = 208/485 (42%), Gaps = 65/485 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLK 175
+K P + VY+ ++ L + L+ M E C + TY S++ L
Sbjct: 120 QKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALD 179
Query: 176 KAKK----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDWD-------- 216
+A+K D A N +G+ K+ ++ V+K L ++V G + D
Sbjct: 180 EARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVV 239
Query: 217 ---------DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF---------RWVGE 258
++ GK LE M + V+T Y GF R + +
Sbjct: 240 ACLCESGKYEEAGKILEKMIEKKCGPDVVT-------YNSLMDGFCKVSKMDEAERLLED 292
Query: 259 HSGYKH--NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G + ITY ++ +R + + D + V+E+M K G D+ TY + K
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLS-KS 374
+E+A +L E M++ P V S+L+ + + D L+ + + N ++ +
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ DG +A G+ DE K+++ MK PD +TYS +I G CKA R +DA +L
Sbjct: 413 MIDGFCKA----GKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL--- 465
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G PD +++ +++G C+ +V+ A M ++ + ++I G +R
Sbjct: 466 ---GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERG 522
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A K+L M E+ P T+ LI L +R+E+A+N+L +M ++ P +
Sbjct: 523 DEALKMLQVMSER-GCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTS 581
Query: 555 YISKF 559
I F
Sbjct: 582 LIDGF 586
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 9/239 (3%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S S Y + ++ G ++ M F PD IT++ ++ C+ G + A L
Sbjct: 23 SNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRA---L 79
Query: 432 DEMEENG-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
C P T+ ILI G C +D A +M++K+ DA + + LI G
Sbjct: 80 SHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+++ A +L M+E+ P T+ +LI L+EA L+ MK+ P
Sbjct: 140 MGKIDAARNVLKMMLER-SCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198
Query: 551 PF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + + K +E+ S+ L+ + P + +Y V G++ EA +L K
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEK 257
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 3/143 (2%)
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+P N TY +I G +AG + + +EM PD+ T +++ +C ++DRAL
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F M + A +LI+G +R++ AY+LL EMI+K P A + LI L
Sbjct: 81 HFRGKMWCS--PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK-DCHPDAAVYNCLIAGL 137
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
+++ A N+L++M +++ P
Sbjct: 138 CKMGKIDAARNVLKMMLERSCVP 160
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 171/357 (47%), Gaps = 13/357 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQ 310
FF W + GY+H+ Y +++ L + W ++EEM+KE Y + + +I + R+
Sbjct: 127 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 186
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F RM++ AV++ + M +P LL ++ G V A+ +E +
Sbjct: 187 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN-----GSVKEAASLFEDMRVR 241
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ ++ + + + G+ EA+ ++ +K AGFEPD + Y+ ++ G +AG+ DA
Sbjct: 242 FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAF 301
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L EM++ C P+ ++TILIQ C ++D A+ F +M +AD LI+GF
Sbjct: 302 DLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGF 361
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP- 547
+ AY++L +MI+K P Q ++ ++ LEE M L+ M+K P
Sbjct: 362 CKWGNTDKAYEILDDMIQKGH-DPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 420
Query: 548 --FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
++ + K G +++A + P Y+ + F ++G EA D
Sbjct: 421 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACD 477
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 179/447 (40%), Gaps = 47/447 (10%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
VL + + FF W + +R S VY M++ L W + M++++
Sbjct: 113 VLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENP 172
Query: 161 Y-IEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIAMDN--VAKTLVDVVLGSD 214
Y + E ++ ++ ++ KKA ++ D M K + V L+D + +
Sbjct: 173 YMLTPEVFIVLMRRFASVRMVKKAVEVL------DEMPKYGCEPDEYVFGCLLDALCKNG 226
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
+ EDM++ + N +H + +L
Sbjct: 227 SVKEAASLFEDMRVRFNPNL----------------------------RH----FTSLLY 254
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
R + + +V+ ++K+ G+E DI Y + + + M DA L M P
Sbjct: 255 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGP 314
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+ ++L++S D + R+ + + G Y + K G D+A +
Sbjct: 315 NAASFTILIQSFCKTEKMDEAM--RIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYE 372
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M G +P ++Y ++ K E+ +++EM + GC+PD+ + +I+ C
Sbjct: 373 ILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC 432
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR-PW 513
++ A+ + +M + D ++++GFLSQ + A EM+E+ L P
Sbjct: 433 KLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ 492
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLM 540
T K L LL A +LE A N+ M
Sbjct: 493 YGTLKELTNALLRAEKLEMAKNMWSCM 519
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 138 bits (348), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 171/357 (47%), Gaps = 13/357 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQ 310
FF W + GY+H+ Y +++ L + W ++EEM+KE Y + + +I + R+
Sbjct: 150 FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRR 209
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F RM++ AV++ + M +P LL ++ G V A+ +E +
Sbjct: 210 FASVRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN-----GSVKEAASLFEDMRVR 264
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ ++ + + + G+ EA+ ++ +K AGFEPD + Y+ ++ G +AG+ DA
Sbjct: 265 FNPNLRHFTSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAF 324
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L EM++ C P+ ++TILIQ C ++D A+ F +M +AD LI+GF
Sbjct: 325 DLLAEMKKVNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGF 384
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP- 547
+ AY++L +MI+K P Q ++ ++ LEE M L+ M+K P
Sbjct: 385 CKWGNTDKAYEILDDMIQKGH-DPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPD 443
Query: 548 --FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
++ + K G +++A + P Y+ + F ++G EA D
Sbjct: 444 LNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACD 500
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/447 (20%), Positives = 179/447 (40%), Gaps = 47/447 (10%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
VL + + FF W + +R S VY M++ L W + M++++
Sbjct: 136 VLSRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENP 195
Query: 161 Y-IEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIAMDN--VAKTLVDVVLGSD 214
Y + E ++ ++ ++ KKA ++ D M K + V L+D + +
Sbjct: 196 YMLTPEVFIVLMRRFASVRMVKKAVEVL------DEMPKYGCEPDEYVFGCLLDALCKNG 249
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
+ EDM++ + N +H + +L
Sbjct: 250 SVKEAASLFEDMRVRFNPNL----------------------------RH----FTSLLY 277
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
R + + +V+ ++K+ G+E DI Y + + + M DA L M P
Sbjct: 278 GWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGP 337
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+ ++L++S D + R+ + + G Y + K G D+A +
Sbjct: 338 NAASFTILIQSFCKTEKMDEAM--RIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYE 395
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M G +P ++Y ++ K E+ +++EM + GC+PD+ + +I+ C
Sbjct: 396 ILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVC 455
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR-PW 513
++ A+ + +M + D ++++GFLSQ + A EM+E+ L P
Sbjct: 456 KLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQ 515
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLM 540
T K L LL A +LE A N+ M
Sbjct: 516 YGTLKELTNALLRAEKLEMAKNMWSCM 542
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 170/350 (48%), Gaps = 19/350 (5%)
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
+L + + I L +++S VL VLK+L V AL FFRW + G+K++T Y
Sbjct: 89 LLCTHSNSSIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENY 148
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N ++ L + + + WN+V +M+ +G + +T+ ISR++ + R +++AV+ FE M
Sbjct: 149 NALIEALGKIKQFKMIWNLVNDMRSKGL-LTQETFALISRRYARARKVKEAVETFEKMEK 207
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG-- 387
+P + D + LL ++ + V R ++ + + + L G
Sbjct: 208 FGLQPVLSDFNRLLDALCKSRH-----VERAQEVFDKMKDRKFRPDIKSYTILLEGWGQE 262
Query: 388 ----RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
R DE + + MK+ GFEPD +TY +I CKA R++ A + +ME N C+P
Sbjct: 263 QNLLRLDE---VYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTP 319
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+ LI G + + AL F + + +A + ++ + R++ AY+++ E
Sbjct: 320 HIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDE 379
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
M K + P T+ ++ L+ ARR +EA + + M + P EP V
Sbjct: 380 M-RKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSE---PGCEPSV 425
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/503 (23%), Positives = 205/503 (40%), Gaps = 56/503 (11%)
Query: 29 FTRVTHFFHISSFTASNQSHTSQFHI-----NTCQKIFFSTSPNSSLELILACDWSDELE 83
F R H I + + + + HI C+ T NSS+E +L D
Sbjct: 54 FCRSIHGGSIRNQACTETTDATNHHIAQDTGKLCK--LLCTHSNSSIESLLNGASVD--- 108
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
+SP L V+ VL+KL N A +FF W +K F+ S+ Y+ ++ L
Sbjct: 109 -----VSPTL----VLEVLKKLSNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIK 159
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K W + M+ + +ET+ I +A+K + A+ F + +
Sbjct: 160 QFKMIWNLVNDMRSKG-LLTQETFALISRRYARARKVKE--AVETF----------EKME 206
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
K + VL SD++ + + +E + V +K+ + P
Sbjct: 207 KFGLQPVL-SDFNRLLDALCKSRHVERAQE-VFDKMKDRKFRP----------------- 247
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +Y +L + +++ V EMK EG+E D TY + K R + AV+L
Sbjct: 248 -DIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVEL 306
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F M P+ L+ + S L F + ++ G + Y+ + +
Sbjct: 307 FHKMEANKCMPTPHIYCTLINGLGSERRLTEALQF--FERSKASGFTPEAPTYNAVVGSY 364
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENGCIPD 442
+ R D+A +++ M+ G P TY ++ L KA R ++A V M E GC P
Sbjct: 365 CQSMRMDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPS 424
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ I+++ C VD AL + +M K + LIN + +++ A K
Sbjct: 425 VSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFH 484
Query: 503 EMIEKVRLRPWQATFKTLIEKLL 525
EM++ + +RP A F L + LL
Sbjct: 485 EMLD-MGIRPPAAMFSNLKQTLL 506
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 136/361 (37%), Gaps = 71/361 (19%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E+A F+ + D+K FRP Y+++L + +L + R MK++ + TY
Sbjct: 231 ERAQEVFDKMKDRK-FRPDIKSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGI 289
Query: 170 ILGVLKKAKKASDLAALNQFHDGMV-KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI 228
++ KA++ AA+ FH K + ++ TL++ LGS
Sbjct: 290 LINAHCKARRYD--AAVELFHKMEANKCMPTPHIYCTLING-LGS--------------- 331
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
E R+ +AL FF + SG+ TYN ++ + + D + +
Sbjct: 332 ------------ERRL--TEALQFFER-SKASGFTPEAPTYNAVVGSYCQSMRMDDAYRI 376
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
V+EM+K G TY I K R ++A ++F+ M P
Sbjct: 377 VDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEP----------------- 419
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
G S S Y+ + R R D A ++ MK G P
Sbjct: 420 -------------------GCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGM 460
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+S +I LC + ++AC EM + G P ++ L Q + D L+ K
Sbjct: 461 HMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQK 520
Query: 469 M 469
+
Sbjct: 521 L 521
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/361 (29%), Positives = 167/361 (46%), Gaps = 18/361 (4%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A+ FF W G ++H TYN L R + + + +E + D TY +
Sbjct: 73 AMVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILI 132
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R F ++ A L+E M+D +P V C LL ++ N +L L R K S+
Sbjct: 133 RGLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELAL--RYFEKMSSIP 190
Query: 369 NSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ + ++ DG+ RA+ R DEA + MK+ P+N TY+ VI GL KAG+ +A
Sbjct: 191 CAATWTILIDGLFRAI----RVDEACYYFEEMKHTAI-PNNWTYTVVINGLVKAGKVAEA 245
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL EM +P + +T +I GHC A ++ +A M K Y D + LI+G
Sbjct: 246 ERVLQEMP----VPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHG 301
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN--Y 545
+ ++ AY+LL EM + P T+ LI L A+RL EA +LL ++ ++
Sbjct: 302 HCRLQEIDRAYELLEEM-KSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCT 360
Query: 546 PPFPE--PFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P + SK V DA + FL+ ++ ++P Y + N GR EA
Sbjct: 361 PNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSY 420
Query: 603 L 603
L
Sbjct: 421 L 421
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 124/571 (21%), Positives = 229/571 (40%), Gaps = 53/571 (9%)
Query: 68 SSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
SS L + W+ +L +L V V+ + + E A FF W ++ FR
Sbjct: 41 SSSRLGFSMKWNGQLSQRL------------VGVILHMVKNGESAMVFFGWAGTRQDFRH 88
Query: 128 SSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKASDLAAL 186
+ Y+ L+ ++ + + + TY + I G+ K +
Sbjct: 89 TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-IELSDNFVLTVLKELRIY 245
+ D ++ + + K L++ + S + + E M I + + + + R
Sbjct: 149 EEMVDRGLRPVVL--TCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAI 206
Query: 246 PVKALGFFRWVGEHSGYKHN---TITYNGILR------------------------VLAR 278
V ++ +H+ +N T+ NG+++ V+
Sbjct: 207 RVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGG 266
Query: 279 HESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
H D ++++E+MK++GY+ D TY + + + ++ A +L E M + P
Sbjct: 267 HCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPD 326
Query: 336 VQDCSLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
+ +L+ + + L+ + N+ + N +S Y+ + +K R ++A
Sbjct: 327 IFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVS---YNTLIDGFSKAARVNDAY 383
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M AG PD +TYS +I GLC AGR +A + L+EM +P + ++ +I G
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C A E+D A F M+ + + + LI G R+ A + EM E+ P
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTER-GCSPD 502
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK-AL 572
T+ TLI L R +EA +L +Q I+ +E A L+ L
Sbjct: 503 GVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVL 562
Query: 573 SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ P++ Y V ES E EA+ LL
Sbjct: 563 ATGNSPTAFFYATVIESLCKENNLAEARQLL 593
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 149/348 (42%), Gaps = 10/348 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + N YN ++ L + + D V+EM + G D TY + ++ ++
Sbjct: 462 NGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDE 521
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L+ ++ + S C++++ S+ + RV + GNS + Y +
Sbjct: 522 ACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQ-----RVLRVVLATGNSPTAFFYATV 576
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+L K EA ++++ M AG +PD T ++ +C+ + A L+EM G
Sbjct: 577 IESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGS 636
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV-LINGFLSQKRVNGAY 498
P + T++ L+ A + A + +++ +L V LI + +Q +V A
Sbjct: 637 KPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEAR 696
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+L E+ K ++ A + TL++ L R L+ LLR MK+ + F +Q
Sbjct: 697 NVLQELKSKWGIQSIVA-YNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQG 755
Query: 556 ISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G + A L + PS+A + + R E+KDL+
Sbjct: 756 FCRLGQTDRAVRVLSEMKKVLTPSAAIIKFLVDELARAEREQESKDLV 803
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 163/431 (37%), Gaps = 41/431 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-------GVLKKAKK 179
P YS ++R L N R E H Y+EE IL V+ +
Sbjct: 396 PDVVTYSTLIRGLCNAG----------RASEAHSYLEEMVGKKILPKVPVYSSVISGLCR 445
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
A +L A + D MV N+A ++ G K G+ L D K+ + +
Sbjct: 446 AGELDAASTVFDSMVANGCQPNLA-VYNSLIYGLC---KTGR-LCDAKLRVKEMTERGCS 500
Query: 240 KELRIYPVKALGFFRWVGE-----------HSGYKHNTITYNGILRVLARHESVRDFWNV 288
+ Y +G RW G + + + N ++ L E + V
Sbjct: 501 PDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRV 560
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
V G Y + K + +A +L E M+ KP L+ ++
Sbjct: 561 V---LATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCR 617
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPD 407
+ + + F + LG+ S Y + AL K G+ EA +++ + + PD
Sbjct: 618 QDKAVVAMAF--LEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPD 675
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y +I + E+A NVL E++ I I + L++G +
Sbjct: 676 ELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLR 735
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M + + ++LI GF + + A ++L EM K L P A K L+++L A
Sbjct: 736 EMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSEM--KKVLTPSAAIIKFLVDELARA 793
Query: 528 RRLEEAMNLLR 538
R +E+ +L++
Sbjct: 794 EREQESKDLVK 804
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 150/377 (39%), Gaps = 14/377 (3%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K+ P VYS ++ L L M + C Y S++ L K + D
Sbjct: 427 KKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCD 486
Query: 183 LAALNQFHDGMVKEIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDMK--IELSDNFVLTV 238
A + + + + D V +V + S D+ + ++ IE+S+ V
Sbjct: 487 --AKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEISETSCNVV 544
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+ LR +A R V +G Y ++ L + ++ + ++E+M G +
Sbjct: 545 IASLRCLE-QAQRVLRVV-LATGNSPTAFFYATVIESLCKENNLAEARQLLEDMIGAGIK 602
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D T + + A+ E M+ KPSV S LL ++ P V
Sbjct: 603 PDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAGKPSEAHVV 662
Query: 359 --RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
R+ + + L Y G+ A + + +EA +++ +K+ + Y+ ++
Sbjct: 663 LRRLISHTSCFPDELW---YVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAYNTLLK 719
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GL + + +L EM+ N + + T+ ILIQG C + DRA+ ++ M+K
Sbjct: 720 GLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRVLSE-MKKVLTP 778
Query: 477 DADLLDVLINGFLSQKR 493
A ++ L++ +R
Sbjct: 779 SAAIIKFLVDELARAER 795
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/533 (22%), Positives = 231/533 (43%), Gaps = 46/533 (8%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W +N L ++ L ++VV VL L D + A FF W ++ + ++ Y M+
Sbjct: 166 WECLQDNFLNSMAQDLNPDAVVKVL-NLQTDAQNALRFFQWADKQEGYDHNTDAYFTMID 224
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS-ILGVLKKAKKASDLAALNQFHDGMVKE 196
L + L++M+ I S ++ + + L A N ++KE
Sbjct: 225 ILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRFKESLEAFN-----LMKE 279
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ + L+D ++ + +++ K+++++N ++
Sbjct: 280 MGYE---PGLIDTA----YNSVLVSLVKNKKLDMAENLFAQMI----------------- 315
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
++G N +TY +++ E + D ++++M + Y D+ TY + K +M
Sbjct: 316 --NNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKM 373
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+E A + + M + +P++ + L++ + ++ P+ L + E G + Y
Sbjct: 374 IEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL--ELVTLMEQGGVPPNIYTY 431
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L KL R D A++M G +P+ +TY+ ++ G C+ R +A ++L EM +
Sbjct: 432 TILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQ 491
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N C PD T+T LIQG N++ AL +M K YD + D L++L G RV G
Sbjct: 492 NDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGL---ARV-G 547
Query: 497 AYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
+K +++ R + + + I L A +EEA LL M + Y P +
Sbjct: 548 NHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYN 607
Query: 554 QYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
I F G ++DA L + P + +Y + + F N+GR +A L
Sbjct: 608 TMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQL 660
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/351 (26%), Positives = 168/351 (47%), Gaps = 13/351 (3%)
Query: 209 VVLGSDWDDKIGKKLEDMKIE-LSDNFVLTVLKELRIYPV-----------KALGFFRWV 256
VV D +KI K +E+ + E L DNF+ ++ ++L V AL FF+W
Sbjct: 147 VVQQEDTVNKICKAIEEDQWECLQDNFLNSMAQDLNPDAVVKVLNLQTDAQNALRFFQWA 206
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
+ GY HNT Y ++ +L R + + +++++M+ +G E+ + +
Sbjct: 207 DKQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGR 266
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+++++ F M + Y+P + D + +S + N L + + + + G S + Y
Sbjct: 267 FKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTY 326
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + ++A K++ M + PD +TY+ VI LCK E A VL +M E
Sbjct: 327 TSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRE 386
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NGC P+I T+ LIQG CA + AL M + + +L +G +R++
Sbjct: 387 NGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDR 446
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A ++ E + + L+P + T+ TL+ RL EAM++L+ M + + P
Sbjct: 447 AKEMFNEALAR-GLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTP 496
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/333 (18%), Positives = 152/333 (45%), Gaps = 19/333 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI---LGVLKKAK 178
+ + P Y++++ L + ++Q + L++M+E+ C TY ++ L +++ +
Sbjct: 351 QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPE 410
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD-----WDDKIGKKLEDMKIELSDN 233
+A +L L + G+ I + + + D +++ + + L+ ++ +
Sbjct: 411 EALELVTLME-QGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTY-NT 468
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ + R+ ++A+ + + ++ + +TY +++ L + + D + +EM+
Sbjct: 469 LLNGYCRGSRL--IEAMDILKEMHQNDCTP-DHVTYTTLIQGLVQGNQLPDALRMHDEME 525
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+GY+++ DT ++R + +DA + M D + S D L + +S+ +
Sbjct: 526 NKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEME 585
Query: 354 --LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
L++ + NK G S + + Y+ + + + GR D+A+ M+ M G PD +Y
Sbjct: 586 EAQALLYEMINK----GYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSY 641
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ +I GR +DA + E G + + K
Sbjct: 642 NILIKEFHNQGRTQDADQLYATALERGVVLNPK 674
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 141/287 (49%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+ YN ++ L + E++ + ++EEM +GY D TY I + + +A
Sbjct: 144 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEA 203
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F+ M Y P V + LL ++ D + ++ + G Y+ I
Sbjct: 204 KQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAM--KLFKDVIAKGYMPDTVTYNSIL 261
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + DEAE+M K M +G P+ TYS V+ G C+A + +DA VL+EM + G +
Sbjct: 262 LGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAV 321
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ IL+ G C N VD+A F+ M++ D V++NG +V+ A L
Sbjct: 322 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 381
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
MIE+ +L P TF L++ L A +L+EA +LL M P
Sbjct: 382 FDRMIER-KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAP 427
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 171/389 (43%), Gaps = 10/389 (2%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
PS Y+ +L + +K+ + M E + TY +I+ L K K ++
Sbjct: 74 LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVL-TVLK 240
+ FH + + + + VA L++ + + ++ K LE+M K + DN T+L
Sbjct: 134 EM-LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192
Query: 241 EL-RIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
L R+ V +A FF + GY + + YNG+L L + + + +++ +GY
Sbjct: 193 GLCRMGKVSEAKQFFDSM-PSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYM 251
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D TY I + M++A ++F+ M+ P+ S++L D
Sbjct: 252 PDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD--AH 309
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+V + +G Y+ + L K D+A ++ M + G PD ++YS V+ GL
Sbjct: 310 KVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGL 369
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK + DA + D M E +PD+ T+ IL+ G C A ++D A +M D
Sbjct: 370 CKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDY 429
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ L+NG Q R A +L M EK
Sbjct: 430 VAYNTLMNGLRKQGRHIQADRLTQAMKEK 458
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 134/290 (46%), Gaps = 6/290 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + I YN ++ A+ V + + EEM G E I TY + F K M++
Sbjct: 37 NGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKE 96
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVYD 377
A++LF+ M + ++P V S ++ + L ++F +K G S + Y+
Sbjct: 97 AMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLF---HKMIERGCSANTVAYN 153
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K + A K+++ M + G+ PDNITY+ ++ GLC+ G+ +A D M
Sbjct: 154 ALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSR 213
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ + L+ + D A+ F ++ K Y D + ++ G + ++ A
Sbjct: 214 GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEA 273
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ +M+ P AT+ ++ A+++++A +L M K P
Sbjct: 274 EEMFKKMVAS-GCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVP 322
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 130/286 (45%), Gaps = 8/286 (2%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
T+ + + F K + D KLFE M+D P + ++L+ + D R+
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE--ANRLYE 67
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ S+G S Y+ + A K + EA ++ K M GFEPD +TYS +I GLCK G
Sbjct: 68 EMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTG 127
Query: 423 RFEDACNVL-DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ +A +L +M E GC + + LI G C ++RA +M K Y D
Sbjct: 128 KVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ +++G +V+ A + M + P + L++ L + +EAM L + +
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVI 246
Query: 542 KQNYPPFPEPF---VQYISKFGTVEDASE-FLKALSVKEYPSSAAY 583
+ Y P + + +++ +++A E F K ++ P+ A Y
Sbjct: 247 AKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATY 292
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 6/230 (2%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ ++ K G+ + K+ + M + G PD I Y+ +I G K GR ++A + +EM G
Sbjct: 14 VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P I T+ L+ C ++ A+ F M EK ++ D +I+G +V A
Sbjct: 74 LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133
Query: 499 KLLV-EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++L +MIE+ + LI L +E A LL M + Y P + +S
Sbjct: 134 EMLFHKMIER-GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILS 192
Query: 558 ---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G V +A +F ++ + Y P AY + ++ + EG+ EA L
Sbjct: 193 GLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLF 242
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 156/367 (42%), Gaps = 34/367 (9%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ +++ L K E F+ + ++ ++ Y+ ++ L +++++ + L
Sbjct: 114 VTYSTIISGLCKTGKVTEALEMLFHKMIER-GCSANTVAYNALINGLCKDENIERAYKLL 172
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKAS----------------DLAALNQFHDGMVKE 196
M + TY +IL L + K S D+ A N D + KE
Sbjct: 173 EEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 232
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
D K DV+ D + ++ +L + ++ + + + F + V
Sbjct: 233 GKTDEAMKLFKDVIAKGYMPDTV----------TYNSILLGLARKSNMDEAEEM-FKKMV 281
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
SG N TY+ +L R + V D V+EEM K G D+ TY + K +
Sbjct: 282 A--SGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSV 375
++ A +LF M+D P + S++L + N D ++F + + + + ++ ++
Sbjct: 340 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 399
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ L K G+ DEA+ ++ M +G PD + Y+ ++ GL K GR A + M+
Sbjct: 400 ---LMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMK 456
Query: 436 ENGCIPD 442
E G + D
Sbjct: 457 EKGFLSD 463
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P+ T+ ++++ C ++ F +M++ D ++LI+G+ + RV+ A
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS- 557
+L EM+ V L P T+ +L+ +++EAM L + M ++ + P + IS
Sbjct: 64 RLYEEMVS-VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISG 122
Query: 558 --KFGTVEDASEFL 569
K G V +A E L
Sbjct: 123 LCKTGKVTEALEML 136
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 124/495 (25%), Positives = 225/495 (45%), Gaps = 29/495 (5%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+K+ P + VY+ +++ L + + V R M+ +C TY ++ L K+ +
Sbjct: 194 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARI 252
Query: 181 SDLAALNQFHDGMVKEIAMDNVA--KTLVD--VVLGSDWDDKIGKKLEDMKIELS---DN 233
SD + + + M++ NV TL++ LG + D+ + L + +E S D
Sbjct: 253 SDASLI---LEDMIEAGCAPNVVTYNTLINGFCKLG-NMDEAV--VLFNQMLENSCSPDV 306
Query: 234 FVLTVL-----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
F +L K+ R P + + ++ G + N ITYN ++ L + D +N+
Sbjct: 307 FTYNILIDGYCKQER--PQDGAKLLQEMVKY-GCEPNFITYNTLMDSLVKSGKYIDAFNL 363
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+ M + + T+ + F K ++ A +LF+ M D P + ++++
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 423
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N D ++ + G Y+ I L K + DEA ++ + ++N G+ D
Sbjct: 424 ANRIDDAR--QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 481
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+T S +I GLCK+ R +DA +L EME NG PD+ +TILI G C A+++D++L F++
Sbjct: 482 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 541
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M++K ++I+ RV LL M+E+ + P + ++I+ L +
Sbjct: 542 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER-GVTPDAIVYTSVIDGLCKSD 600
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE----YPSSAAYL 584
+EA L +LMK+ P + + K V E + L V E P + Y
Sbjct: 601 SYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYN 660
Query: 585 QVFESFFNEGRHYEA 599
VF+ F+ H +A
Sbjct: 661 SVFDGFWKSAEHDKA 675
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 170/390 (43%), Gaps = 50/390 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ FF W GYKH+ T N +L R + ++ +++ + + D TY +
Sbjct: 114 KAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTL 173
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K R + A +L + M E
Sbjct: 174 INGFCKARDFQQAYRLLDEM-------------------------------------EKR 196
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G +VY+ I + L GR D A + M+ P ITY+ ++ LCK+ R DA
Sbjct: 197 GIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISDA 255
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L++M E GC P++ T+ LI G C +D A++ F +M+E + D ++LI+G
Sbjct: 256 SLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 315
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ Q+R KLL EM+ K P T+ TL++ L+ + + +A NL ++M +++ P
Sbjct: 316 YCKQERPQDGAKLLQEMV-KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 374
Query: 548 FPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
F + K G ++ A E + ++ + P Y + R +A+ LL
Sbjct: 375 SHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLL 434
Query: 604 YK-----CPHHIRQDSKISLLFGSAKSNKV 628
+ CP + + S++ G K+++V
Sbjct: 435 ERMTEAGCPPDVVTYN--SIVSGLCKASQV 462
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + +TYN I+ L + V + + V E ++ GY +D+ T + K R ++
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--Y 376
DA KL M P V ++L+ + D L F E L +V Y
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFS----EMLDKGCVPTVITY 554
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L K R + ++K M G PD I Y+ VI GLCK+ +++A + M++
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC P + T+ +L+ C + +D A+ M D + + +GF +
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
A++L M + P + L+ KL+ ++++AM +
Sbjct: 675 AFRLFQAMKSR-GCSPTPFMYSLLLTKLVAEEKMDQAMEI 713
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 137/370 (37%), Gaps = 66/370 (17%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS----- 181
P Y++M+ + + L RM E C + TY SI+ L KA +
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEV 468
Query: 182 -----------DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL 230
D+ + DG+ K +D+ K L ++ D + +
Sbjct: 469 YEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCK 528
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+D K+L FF + + G ITY+ ++ L + VRD +++
Sbjct: 529 ADQLD------------KSLAFFSEMLDK-GCVPTVITYSIVIDKLCKSARVRDGCMLLK 575
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M + G D Y + K ++A +L++ M P+V
Sbjct: 576 TMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTV-------------- 621
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
Y+ + L K+ R DEA +++ M++ G PD +T
Sbjct: 622 -----------------------VTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVT 658
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ V G K+ + A + M+ GC P +++L+ A ++D+A+ + + +
Sbjct: 659 YNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEAL 718
Query: 471 EKNYDADADL 480
E D D ++
Sbjct: 719 EAGADVDPEI 728
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 133 bits (335), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 158/356 (44%), Gaps = 24/356 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITY ++ L + V W V+ EM G ++ TY + + R + DA
Sbjct: 221 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 280
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
+ L M P+V L+ + + RV + L + + K
Sbjct: 281 LALMRDMTCRGCTPNVVTYGTLIDGLCKVG--------RVKDACAMLADMIDKGGTPDLM 332
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y+ + L K + DE+ +++ + G +PD +TYS VI+GLC++ R ++AC +L +
Sbjct: 333 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 392
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ GC PD+ ++ LI G C A +VD A + M DAD LI+G RV
Sbjct: 393 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRV 452
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A+ LL M+ ++ P T+ +LI+ L L+EA+ L+ M++ N P +
Sbjct: 453 DEAHLLLARMV-RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNI 511
Query: 553 -VQYISKFGTVEDASEFLKALSVKEYPSSA------AYLQVFESFFNEGRHYEAKD 601
+ + + V+ A L+ + + AY + + GR EA D
Sbjct: 512 LIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALD 567
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 172/403 (42%), Gaps = 46/403 (11%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ AL FR + + SG +T+ Y +L L + + + ++ EM+ G E ++ TY
Sbjct: 61 IDALRCFRAM-QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNS 119
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANK 363
+ K + A +LFE M PS+ + LL + + + + +
Sbjct: 120 LIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179
Query: 364 YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ + S +V Y + L K R +A +++++MK G PD ITY+ ++ GLCK
Sbjct: 180 SHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKE 239
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL------------------ 463
+ A VL EM + GC+P++ T+ L+ G C A V AL
Sbjct: 240 SKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTY 299
Query: 464 ------LC-----------FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LC A M++K D + ++LING +V+ + LL +
Sbjct: 300 GTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVS 359
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
++P T+ ++I L + RL+EA LL +K + PP + + K G V+
Sbjct: 360 G-GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD 418
Query: 564 DASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLLYK 605
+A + + ++ + Y + + GR EA LL +
Sbjct: 419 EAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLAR 461
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 108/454 (23%), Positives = 188/454 (41%), Gaps = 56/454 (12%)
Query: 110 EKASAFFNWVCDKK------QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIE 163
E+A A F + D++ + P+ YS+++ L + + Q L MK C +
Sbjct: 166 ERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPD 225
Query: 164 EETYLSIL-GVLKKAKKASDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGK 221
TY ++ G+ K++K A+ L + D G V + N
Sbjct: 226 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYN-------------------- 265
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHES 281
+ + + + R+ AL R + G N +TY ++ L +
Sbjct: 266 -----------SLLHGLCRARRVS--DALALMRDM-TCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
V+D ++ +M +G D+ Y + K +++++ L + G KP V S
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 371
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
++ + N D R+ +S G +Y + L K G+ DEA + + M
Sbjct: 372 VIYGLCRSNRLDEA--CRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG 429
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G + D +TYS +I GLCKAGR ++A +L M G P T+ LI+G C N +D
Sbjct: 430 DGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDE 489
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA------ 515
A+ +M N A ++LI+G +RV+ A V ++E+ + R A
Sbjct: 490 AIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA----VVLLEQAKARCVAAGGTALD 545
Query: 516 --TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +LI+ L A R+ EA++ + M P
Sbjct: 546 TIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIP 579
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 60/387 (15%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS----SINNPDLG 355
D+ TY + R F + ++ A + F+ M P+V CS+L+ + SI+
Sbjct: 8 DVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID----- 62
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R + G +Y + L K R D+A ++ M++ G EP+ +TY+ +I
Sbjct: 63 -ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLI 121
Query: 416 FGLCK-----------------------------------AGRFEDACNVLDEM------ 434
GLCK G+ E A + EM
Sbjct: 122 DGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSH 181
Query: 435 -EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
++ C P++ T+++LI G C AN V +A+ M + D +L++G + +
Sbjct: 182 DMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESK 241
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
V A+++L EM++ + P T+ +L+ L ARR+ +A+ L+R M + P +
Sbjct: 242 VAAAWEVLREMLDAGCV-PNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300
Query: 553 --VQYISKFGTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLLYKC-PH 608
+ + K G V+DA L + K P Y + + E+ LL +
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360
Query: 609 HIRQD--SKISLLFGSAKSNKVTIPSR 633
I+ D + S+++G +SN++ R
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACR 387
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 155/370 (41%), Gaps = 47/370 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ L + + W LR M + C TY S+L L +A++ SD AL
Sbjct: 224 PDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALAL 283
Query: 187 ----------------NQFHDGMVKEIAMDNVAKTLVDVV-LGSDWD------------- 216
DG+ K + + L D++ G D
Sbjct: 284 MRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 343
Query: 217 -DKIGKKLEDMKIELSDNFVLTVLK-ELRIYPV-------KALGFFRWVGEHSGYKHNTI 267
D++ + + ++ +S V+ IY + +A +V + G + I
Sbjct: 344 ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV-KSRGCPPDVI 402
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y+ ++ L + V + +++ E M +G + D+ TY + K +++A L M
Sbjct: 403 LYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARM 462
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ PS + L++ + +N+ D + + + E + S Y+ + + ++
Sbjct: 463 VRMGTPPSTMTYNSLIKGLCDLNHLDEAI--ELVEEMERSNCAPSAVTYNILIHGMCRME 520
Query: 388 RFDEAEKMM-----KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
R D A ++ + + G D I YS +I GLCKAGR +A + EM +NG IPD
Sbjct: 521 RVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPD 580
Query: 443 IKTWTILIQG 452
T++IL++G
Sbjct: 581 HITYSILLEG 590
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 1/143 (0%)
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+PD TY+ ++ G C+ G + A DEM +P++ +ILI G C A AL
Sbjct: 6 QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
CF M AD + L++G +KR++ A +L EM + P T+ +LI+ L
Sbjct: 66 CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDH-GCEPNVVTYNSLIDGL 124
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
+ A L MK P
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSP 147
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 72/161 (44%), Gaps = 5/161 (3%)
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C PD+ T+ L++G C E+D+A CF +M KN + L +LI+G KR A
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+ M + + + L+ L +RL++A+ +L M+ P + +
Sbjct: 65 RCFRAM-QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDG 123
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGR 595
+ K + A E + + SV+ PS Y + + F G+
Sbjct: 124 LCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 164
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 4/182 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TY+ ++ L + V + ++ M + G TY + + +++A
Sbjct: 431 GCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEA 490
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
++L E M PS ++L+ + + D +V K + G +L Y
Sbjct: 491 IELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYS 550
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN-VLDEMEE 436
+ L K GR EA + M + G PD+ITYS ++ GL K+ + + VLD+M +
Sbjct: 551 SLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQ 610
Query: 437 NG 438
G
Sbjct: 611 LG 612
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TY+ I++ L + + + V+EEM G D+ + + + F + ME A +++
Sbjct: 9 NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M++ YKP +L+ ++ I D L ++ ++ G + S Y + RAL
Sbjct: 69 QHMVESGYKPDNVSYHILIHGLAKIGKLDESL--KILSEMVMRGQTPSMQAYSSLVRALA 126
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K R D A + M G PD + + ++I GLC+AG+ +DA +M ++GC P++
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVP 186
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ +L+ G C++ ++++A FA+M + D + L++ +RV KL E
Sbjct: 187 VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLF-EA 245
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE- 563
+ P TF TLI L LE+A+ + M + P + IS E
Sbjct: 246 MRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEK 305
Query: 564 --DASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
A E + ++ P A AY + + G EA+ L
Sbjct: 306 VIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 146/323 (45%), Gaps = 36/323 (11%)
Query: 254 RWVGEH---SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
R V +H SGYK + ++Y+ ++ LA+ + + ++ EM G + Y + R
Sbjct: 65 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRA 124
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKP----------------SVQDCSLLLRSISSIN-NPD 353
K R ++ A LF+ M+ G + P V+D S + + P+
Sbjct: 125 LAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPN 184
Query: 354 L--------GLV----FRVANKY--ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
+ GL AN E +S S V Y+ + A+ K R +E K+ +
Sbjct: 185 VPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFE 244
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
AM+ AG+ P+ IT+S +I GLC+ G E A V M E GC P+ T+T LI G C A
Sbjct: 245 AMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAE 304
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+V +A F KM + DA + LI G+ + ++ A KL EM L+P TF
Sbjct: 305 KVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTF 364
Query: 518 KTLIEKLLGARRLEEAMNLLRLM 540
TLI+ +L A L+ M
Sbjct: 365 NTLIDGFCKLGKLGRANELVAEM 387
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 127/284 (44%), Gaps = 10/284 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN +L + + V + + E M+ GY ++ T+ + + +E A+++F
Sbjct: 219 DVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVF 278
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL---SKSVYDGIHR 381
M++ KP+ + L+ + V + +E + + Y+ +
Sbjct: 279 GSMLEAGCKPNKYTYTTLISGLCRAEK-----VIQARELFEKMTQACIPPDAVAYNSLIA 333
Query: 382 ALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G DEAEK+ + M AG +P +T++ +I G CK G+ A ++ EM G
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 393
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D T+ ILI G A ++D AL + +M EK + D + G ++ AY +
Sbjct: 394 ADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAV 453
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
E K P TF+ L E L+ R+E+A L+ K ++
Sbjct: 454 F-EATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 496
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 103/215 (47%), Gaps = 5/215 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M++ + TYS +I L K + E++ VL+EM GC PD+ + ++QG +N
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A + M+E Y D +LI+G +++ + K+L EM+ + + QA +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQA-YS 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVK 575
+L+ L ARR++ A +L M + + P F + I + G V+DASE K +
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179
Query: 576 E-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
P+ Y + + G+ +A L + H
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSH 214
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/379 (28%), Positives = 175/379 (46%), Gaps = 32/379 (8%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F W+G GY+H+ TYN L LA+ + + + ++M++ GY D TY + R
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNS 370
K ++ A +L + + K +V S+++ + D L +F+ + S G
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS---SGGGC 140
Query: 371 LSKSV-YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ V ++ + + L R EA + + M AG EP+ I+YS ++ GLCKAGR ++AC
Sbjct: 141 VPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACR 200
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM E C+PD+ +T + G C AN V A C KM+ K ADA +I G L
Sbjct: 201 LWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI-GIL 259
Query: 490 SQK------------------RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+K ++ A K EMI + P F TLI + ++RL
Sbjct: 260 CKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRLP 318
Query: 532 EAMNLLRLMK--KQNY-PPFPEPF---VQYISKFGTVEDASEFLKALS-VKEYPSSAAYL 584
+ + L + MK K+ Y PP E + V + K +++A E + ++ P Y
Sbjct: 319 DGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYS 378
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ + G+ A DLL
Sbjct: 379 ALVDGLCKLGKLDRACDLL 397
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 183/453 (40%), Gaps = 60/453 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P Y+ + L + + + R+M + + +++G+L K A
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+ A NQ + + + +D KT +++ + EL + + V K
Sbjct: 267 E--AQNQMIEHLCRSGMLDEACKTFEEMI----------SRNHPPSAELFNTLIHAVCKS 314
Query: 242 LRIYPVKALGFFRWVGEHSGY-KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
R+ P L F R Y N TYN ++ L + + + + +V EM G D
Sbjct: 315 KRL-PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
+ TY + K ++ A L E M +G + S D S+L
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASIL----------------- 416
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
AL+K G+ D A ++ MK G PD +TY+ ++ GLC
Sbjct: 417 ---------------------NALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLC 455
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KAGR ++A L +M C PD+ ++TI+I C + + A F +M+++ D
Sbjct: 456 KAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTV 515
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L L++G NG L +E+++ +P K +++ L A + E+A ++
Sbjct: 516 LYHSLLDGLAR----NGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVER 571
Query: 540 MKKQNYPPFPEPFVQYIS---KFGTVEDASEFL 569
M +P ++ +S K G V+ A + +
Sbjct: 572 MADAGFPADAFTYISVVSGLRKLGKVDKARQLV 604
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 163/383 (42%), Gaps = 62/383 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWN-VVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K + + ++ ++ +L + + N ++E + + G M+++
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG-------------------MLDE 284
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A K FE M+ + PS + + L+ ++ S PD L+F+ + + Y+
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K + DEA++++ M N G PD +TYS ++ GLCK G+ + AC++L+EM + G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 439 CI-----------------------------------PDIKTWTILIQGHCAANEVDRAL 463
PD+ T+ L+ G C A +D A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
AKM+ D ++I + GA+ + EM+++ L P + +L++
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL-PDTVLYHSLLDG 523
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP--EPFVQYISKFGTVEDASEFLKALSVKEYPSSA 581
L AR E + L L P F + + + K G EDA E ++ ++ +P+ A
Sbjct: 524 L--ARNGLEDLALELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADA 581
Query: 582 -AYLQVFESFFNEGRHYEAKDLL 603
Y+ V G+ +A+ L+
Sbjct: 582 FTYISVVSGLRKLGKVDKARQLV 604
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 146/344 (42%), Gaps = 65/344 (18%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMK---EDHCYIEEETYLSILGVLKKAKKASDL 183
PS+ +++ ++ + L + +RMK E +C ETY ++ L KAK+
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ---- 354
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK------LEDMKIE------LS 231
L++ + +V E+A ++ +V D K+GK LE+M E +
Sbjct: 355 --LDEAQE-LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Query: 232 DNFVLTVL-KELRI-YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
D +L L K ++ Y + L + G + +TYN +L L + + + +
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKA----RGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467
Query: 290 EEMKKEGYEMDIDTYI----------------KISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+M D+ +Y I ++ K ++ D V L+ ++DG +
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTV-LYHSLLDGLAR 526
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
++D +L L +S+ PD + K V DG L K G+ ++A
Sbjct: 527 NGLEDLALELLK-TSLCKPDF---------------VMHKMVLDG----LCKAGKAEDAC 566
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
++++ M +AGF D TY V+ GL K G+ + A ++D+ E
Sbjct: 567 EVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASET 610
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 173/380 (45%), Gaps = 34/380 (8%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F W+G GY+H+ TYN L LA+ + + + ++M++ GY D TY + R
Sbjct: 24 LFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGL 83
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNS 370
K ++ A +L + + K +V S+++ + D L +F K S G
Sbjct: 84 CKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIF----KTMSAGGG 139
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
V ++ + + L R EA + + M AG EP+ I+YS ++ GLCKAGR ++AC
Sbjct: 140 CVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEAC 199
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ +EM E C+PD+ +T + G C AN V A C KM+ K ADA +I G
Sbjct: 200 RLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVI-GI 258
Query: 489 LSQK------------------RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
L +K ++ A K EMI + P F TLI + ++RL
Sbjct: 259 LCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH-PPSAELFNTLIHAVCKSKRL 317
Query: 531 EEAMNLLRLMK--KQNY-PPFPEPF---VQYISKFGTVEDASEFLKALS-VKEYPSSAAY 583
+ + L + MK K+ Y PP E + V + K +++A E + ++ P Y
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ + G+ A DLL
Sbjct: 378 SALVDGLCKLGKLDRACDLL 397
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 163/383 (42%), Gaps = 62/383 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWN-VVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K + + ++ ++ +L + + N ++E + + G M+++
Sbjct: 244 GSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSG-------------------MLDE 284
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A K FE M+ + PS + + L+ ++ S PD L+F+ + + Y+
Sbjct: 285 ACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNI 344
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K + DEA++++ M N G PD +TYS ++ GLCK G+ + AC++L+EM + G
Sbjct: 345 MVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEG 404
Query: 439 CIPD-----------------------------------IKTWTILIQGHCAANEVDRAL 463
PD + T+ L+ G C A +D A+
Sbjct: 405 VFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAI 464
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
AKM+ D ++I + GA+ + EM+++ L P + +L++
Sbjct: 465 TFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL-PDTVLYHSLLDG 523
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP--EPFVQYISKFGTVEDASEFLKALSVKEYPSSA 581
L AR E + L L P F + V + K G EDA E ++ ++ +P+ A
Sbjct: 524 L--ARNGLEDLALELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADA 581
Query: 582 -AYLQVFESFFNEGRHYEAKDLL 603
Y+ V G+ +A+ L+
Sbjct: 582 FTYINVVRGLRKLGKVDKARQLV 604
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 158/414 (38%), Gaps = 50/414 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P Y+ + L + + + R+M + + +++G+L K A
Sbjct: 207 EKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAE 266
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+ A NQ + + + +D KT +++ + EL + + V K
Sbjct: 267 E--AQNQMIEHLCRSGMLDEACKTFEEMI----------SRNHPPSAELFNTLIHAVCKS 314
Query: 242 LRIYPVKALGFFRWVGEHSGY-KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
R+ P L F R Y N TYN ++ L + + + + +V EM G D
Sbjct: 315 KRL-PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPD 373
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
+ TY + K ++ A L E M +G + S D S+L ++S D L
Sbjct: 374 VVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASIL-NALSKAGKVDYALSHL 432
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
K + G++ Y+ + L K GR DEA + M A PD +Y+ +I LC
Sbjct: 433 ETMK--ARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALC 490
Query: 420 KAGRFEDACNVLDEMEENG--------------------------------CIPDIKTWT 447
++G+ A + EM + G C PD
Sbjct: 491 RSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSLCKPDFVMHK 550
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+++ G C A + + A +M + + ADA ++ G +V+ A +L+
Sbjct: 551 MVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLV 604
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 146/344 (42%), Gaps = 65/344 (18%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMK---EDHCYIEEETYLSILGVLKKAKKASDL 183
PS+ +++ ++ + L + +RMK E +C ETY ++ L KAK+
Sbjct: 299 PSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQ---- 354
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK------LEDMKIE------LS 231
L++ + +V E+A ++ +V D K+GK LE+M E +
Sbjct: 355 --LDEAQE-LVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFT 411
Query: 232 DNFVLTVL-KELRI-YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
D +L L K ++ Y + L + G + +TYN +L L + + + +
Sbjct: 412 DASILNALSKAGKVDYALSHLETMKA----RGSTPDLVTYNTLLDGLCKAGRIDEAITFL 467
Query: 290 EEMKKEGYEMDIDTYI----------------KISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+M D+ +Y I ++ K ++ D V L+ ++DG +
Sbjct: 468 AKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTV-LYHSLLDGLAR 526
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
++D +L L +S+ PD + K V DG L K G+ ++A
Sbjct: 527 NGLEDLALELLK-TSLCKPDF---------------VMHKMVVDG----LCKAGKAEDAC 566
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
++++ M +AGF D TY V+ GL K G+ + A ++D+ E
Sbjct: 567 EVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASET 610
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 229/530 (43%), Gaps = 29/530 (5%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L +L P LT S V L + DP+ A +FFNW+ + F+ + YS ML L+ L
Sbjct: 59 LRKLLPSLT-PSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD------LAALNQFHDGMVKEIAM 199
M + C IE+ L +L V +K + L N + K + +
Sbjct: 118 GVAEKIRISMIKSCCSIED--VLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLI 175
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
D + ++++ +++I + ++ + + E +Y K +
Sbjct: 176 DEMKTVYLELL-----NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV--------Q 222
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G +T TY ++ R++ V + + V M ++G + + +Y + + + +
Sbjct: 223 AGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINE 282
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KLF M + P+V+ ++L+ ++S L + N+ + G + Y +
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL--NLFNEMKEKGCEPNVHTYTVL 340
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K + DEA KM+ M G P +TY+ +I G CK G +DA +LD ME N C
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ +T+ LI G C +V +A+ KM+E+ + LI+G + AY+
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI--- 556
LL M E L P Q T+ I+ L R+EEA L +K + + I
Sbjct: 461 LLSLMNEN-GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G ++ A L + L+ P+S Y + E E + EA L+ K
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/431 (21%), Positives = 183/431 (42%), Gaps = 50/431 (11%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E+A F+ V K + + +Y+ ++ + + L RM D C TY
Sbjct: 491 EEAGTLFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ L K KK + ++L V ++ V T+V + IG+ L+D +
Sbjct: 550 LIEGLCKEKKMKEASSL-------VAKMLTMGVKPTVVTYTI------LIGEMLKDGAFD 596
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
AL F + GY+ + TY L + + +V+
Sbjct: 597 ------------------HALKVFNHM-VSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-- 347
+M +EG D+ TY + + + + A + M+D KPS+ S+L++++S
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 348 -------------SINNP-DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
S++N + + ++ K G ++ S+Y + + R +EA+
Sbjct: 698 NRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQ 757
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ MK G P Y+ ++ CK G + +A ++D M ENG +P ++++ +L+ G
Sbjct: 758 GLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGL 817
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
++A F ++ Y+ D VLI+G L + V+ + L++++E+ +P
Sbjct: 818 YIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSE-LIDIMEEKGCQPN 876
Query: 514 QATFKTLIEKL 524
T+ LIE L
Sbjct: 877 PLTYSLLIEGL 887
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 158/364 (43%), Gaps = 9/364 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V+AL F + E G + N TY ++ L + + + ++ EM ++G + TY
Sbjct: 316 VEALNLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K M++DA ++ + M P+ + + L+ + + NK
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL--LNKMLE 432
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
S S Y+ + K+ + A +++ M G PD TYS I LCK GR E+
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + D ++ G + +T LI G+C ++D A +M+ ++ +VLI
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G +K++ A L+ +M+ + ++P T+ LI ++L + A+ + M Y
Sbjct: 553 GLCKEKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
P + ++ + G +E+ + + ++ + P Y + + + G + A D
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 603 LYKC 606
L KC
Sbjct: 672 L-KC 674
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/358 (20%), Positives = 146/358 (40%), Gaps = 23/358 (6%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY+ + L + V + + + +K +G + + Y + + K ++ A L E M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ P+ ++L+ + + + K ++G + Y + + K G
Sbjct: 536 LNDACLPNSYTYNVLIEGLC--KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
FD A K+ M + G++PD TY+ + G E+ +V+ +M E G +PD+ T+T
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA---------- 497
+LI G+ RA M++ ++ +LI + R+
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 498 ----YKLLVEMIEKVRLRPWQ---ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
Y++ +++ EK+ + + LI RLEEA L+ MK++ P +
Sbjct: 714 NTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSED 773
Query: 551 PF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLY 604
+ + K G +A + A+ P +Y + + EG + +AK + +
Sbjct: 774 IYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFH 831
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 132 bits (331), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 172/374 (45%), Gaps = 29/374 (7%)
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+ V LG +G H + IT+N ++ L +++ + EM K G+E ++ +Y
Sbjct: 146 FSVSVLGKMFKLGIHP----DAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISY 201
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ K AV +F+ M KP+V S ++ S+ V +
Sbjct: 202 TTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDR--------LVNDAM 253
Query: 365 ESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
E L + + + Y+ I LG+ +EA ++ K M P+ +T++ ++ GL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK G +A V + M E G PDI T+ L+ G+C ++ A F M+ K A
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
++LING+ +R++ A LL EM K L P T+ TL++ L R +EA+NL +
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKA-LNPDTVTYSTLMQGLCQLGRPKEALNLFK 432
Query: 539 LMKKQNYPPFPEPFVQYI------SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
M +Y P P V Y+ K G +++A + LK++ K+ P+ Y + E F
Sbjct: 433 EM--CSYGPHPN-LVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMF 489
Query: 592 NEGRHYEAKDLLYK 605
G+ AK+L K
Sbjct: 490 IAGKLEVAKELFSK 503
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 133/308 (43%), Gaps = 38/308 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+T+ ++ L + V + V E M ++G E DI TY + + R+M +A K+F
Sbjct: 302 NTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVF 361
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M+ P A+ Y L N KS
Sbjct: 362 EIMIRKGCAPG-------------------------AHSYNILINGYCKS---------- 386
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
R DEA+ ++ M + PD +TYS ++ GLC+ GR ++A N+ EM G P++
Sbjct: 387 --RRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLV 444
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ IL+ G C +D AL M EK + + +LI G ++ A +L ++
Sbjct: 445 TYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKL 504
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
RP T+ +I+ LL +EA +L R M+ + P + I F +D
Sbjct: 505 FGD-GTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQD 563
Query: 565 ASEFLKAL 572
+S ++ +
Sbjct: 564 SSTAIRLI 571
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 130/301 (43%), Gaps = 27/301 (8%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRS----------ISSINNPDLGLVFRVANKYES 366
++DA+ F M+ +PSV + L S +S N DL FRV + S
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDL---FRVTHNVYS 130
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
L + + L +L D + ++ M G PD IT++ +I GLC G+ ++
Sbjct: 131 L---------NILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKE 181
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + +EM + G P++ ++T +I G C A+ F KM + + +I+
Sbjct: 182 AVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIID 241
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+ VN A + L EM+E+ + P T+ +++ +L EA L + M ++
Sbjct: 242 SLCKDRLVNDAMEFLSEMVER-GIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVM 300
Query: 547 PFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P F V + K G V +A + ++ K P + Y + + + + EAK +
Sbjct: 301 PNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKV 360
Query: 603 L 603
Sbjct: 361 F 361
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 229/530 (43%), Gaps = 29/530 (5%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L +L P LT S V L + DP+ A +FFNW+ + F+ + YS ML L+ L
Sbjct: 59 LRKLLPSLT-PSHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLL 117
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD------LAALNQFHDGMVKEIAM 199
M + C IE+ L +L V +K + L N + K + +
Sbjct: 118 GVAEKIRISMIKSCCSIED--VLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLI 175
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
D + ++++ +++I + ++ + + E +Y K +
Sbjct: 176 DEMKTVYLELL-----NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIV--------Q 222
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G +T TY ++ R++ V + + V M ++G + + +Y + + + +
Sbjct: 223 AGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINE 282
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KLF M + P+V+ ++L+ ++S L + N+ + G + Y +
Sbjct: 283 ALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEAL--NLFNEMKEKGCEPNVHTYTVL 340
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K + DEA KM+ M G P +TY+ +I G CK G +DA +LD ME N C
Sbjct: 341 IDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSC 400
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ +T+ LI G C +V +A+ KM+E+ + LI+G + AY+
Sbjct: 401 GPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYR 460
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI--- 556
LL M E L P Q T+ I+ L R+EEA L +K + + I
Sbjct: 461 LLSLMNEN-GLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGY 519
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G ++ A L + L+ P+S Y + E E + EA L+ K
Sbjct: 520 CKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAK 569
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 158/364 (43%), Gaps = 9/364 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V+AL F + E G + N TY ++ L + + + ++ EM ++G + TY
Sbjct: 316 VEALNLFNEMKE-KGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K M++DA ++ + M P+ + + L+ + + NK
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL--LNKMLE 432
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
S S Y+ + K+ + A +++ M G PD TYS I LCK GR E+
Sbjct: 433 RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEE 492
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + D ++ G + +T LI G+C ++D A +M+ ++ +VLI
Sbjct: 493 AGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIE 552
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G +K++ A L+ +M+ + ++P T+ LI ++L + A+ + M Y
Sbjct: 553 GLCKEKKMKEASSLVAKML-TMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQ 611
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
P + ++ + G +E+ + + ++ + P Y + + + G + A D
Sbjct: 612 PDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDF 671
Query: 603 LYKC 606
L KC
Sbjct: 672 L-KC 674
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/425 (22%), Positives = 178/425 (41%), Gaps = 60/425 (14%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E+A F+ V K + + +Y+ ++ + + L RM D C TY
Sbjct: 491 EEAGTLFDSV-KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNV 549
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ L K KK + ++L V ++ V T+V + IG+ L+D +
Sbjct: 550 LIEGLCKEKKMKEASSL-------VAKMLTMGVKPTVVTYTI------LIGEMLKDGAFD 596
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
AL F + GY+ + TY L + + +V+
Sbjct: 597 ------------------HALKVFNHMVS-LGYQPDVCTYTAFLHAYFSQGMLEEVDDVI 637
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR----- 344
+M +EG D+ TY + + + + A + M+D KPS+ S+L++
Sbjct: 638 AKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHE 697
Query: 345 -------------SISSINNPDLG-----LVFRVANK-YESL---GNSLSKSVYDGIHRA 382
S+S++N+ D+ L + +A K +E + G ++ S+Y +
Sbjct: 698 NRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAG 757
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ R +EA+ ++ MK G P Y+ ++ CK G + +A ++D M ENG +P
Sbjct: 758 FCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPL 817
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
++++ +L+ G ++A F ++ Y+ D VLI+G L + V+ +L+
Sbjct: 818 LESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELID 877
Query: 503 EMIEK 507
M EK
Sbjct: 878 IMEEK 882
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 147/369 (39%), Gaps = 34/369 (9%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY+ + L + V + + + +K +G + + Y + + K ++ A L E M
Sbjct: 476 TYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERM 535
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ P+ ++L+ + + + K ++G + Y + + K G
Sbjct: 536 LNDACLPNSYTYNVLIEGLC--KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDG 593
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
FD A K+ M + G++PD TY+ + G E+ +V+ +M E G +PD+ T+T
Sbjct: 594 AFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYT 653
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN---------------GFLSQK 492
+LI G+ RA M++ ++ +LI G S
Sbjct: 654 VLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVS 713
Query: 493 RVNGA----------YKLLVEMIEKVRLRPWQ---ATFKTLIEKLLGARRLEEAMNLLRL 539
VN Y++ +++ EK+ + + LI RLEEA L+
Sbjct: 714 NVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 773
Query: 540 MKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGR 595
MK++ P + + + K G +A + A+ P +Y + + EG
Sbjct: 774 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 833
Query: 596 HYEAKDLLY 604
+ +AK + +
Sbjct: 834 NEKAKAVFH 842
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 113/268 (42%), Gaps = 7/268 (2%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ + + + ++ M + G D TY K +E+A LF+
Sbjct: 440 ITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ K + + L+ + D+ L+ R+ N L NS + Y+ + L
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLND-ACLPNSYT---YNVLIEGLC 555
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K + EA ++ M G +P +TY+ +I + K G F+ A V + M G PD+
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T + + + ++ AKM E+ D VLI+G+ + A+ L M
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCM 675
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEE 532
++ +P LI+ L R++E
Sbjct: 676 VD-TGCKPSLYIVSILIKNLSHENRMKE 702
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 175/381 (45%), Gaps = 12/381 (3%)
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ D+ L +V G+ + + L++ + +LS V VL+ L I P AL FF W
Sbjct: 58 VGSDSPISVLERIVQGASDEQALRVALDEYRGQLSPEIVGKVLQRL-IDPGAALVFFEWA 116
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
GY+H N +L VL + ++ + + D TY + F +
Sbjct: 117 ETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGK 176
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSV 375
+ A +LF+ M K +LR + D L FR +K SV
Sbjct: 177 ILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK-----TCPPDSV 231
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + L+K R D+A ++++ M + GF P+ +Y+ V+ G CKA R E+A +L++M
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC PD+ ++T +I G C ++VD A KM+++ + L++GF +
Sbjct: 292 VTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDL 351
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+GA +L+ +M E+ RP T+ ++ +E A +L++M + PP +
Sbjct: 352 DGAVELVRKMTER-GYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 555 YISKF---GTVEDASEFLKAL 572
IS F G + +A + L+ +
Sbjct: 411 IISGFCKAGKLREAHDLLEQM 431
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 196/461 (42%), Gaps = 28/461 (6%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
+LR L + + + A ++ K P S Y+ M+ L D L L M ++
Sbjct: 202 ILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 261
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKI 219
+Y ++L KA + + AL + + D V+ T+++ + D D+
Sbjct: 262 APNVFSYNTVLHGFCKANRVEN--ALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEA 319
Query: 220 GKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE------------HSGYKHNTI 267
+ ++ M V+T Y GF R VG+ GY+ N I
Sbjct: 320 CRVMDKMIQRGCQPNVIT-------YGTLVDGFCR-VGDLDGAVELVRKMTERGYRPNAI 371
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN I+ V R + V++ M + G D Y I F K + +A L E M
Sbjct: 372 TYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQM 431
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+ +P V S L+ ++ D + R++ + + ++ S+ IH AL K
Sbjct: 432 IRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSIL--IH-ALCKA 488
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R EAE + M PD +TY+ V+ GLCK+ R DA + D M G +PD+ T+
Sbjct: 489 KRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTY 548
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I+I C N +D A +M E D LING V+ A+ + EM+
Sbjct: 549 SIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEML- 607
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P T+ TLI+ L ++E+A +L +M+KQ+ P
Sbjct: 608 GCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTP 648
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 133/568 (23%), Positives = 237/568 (41%), Gaps = 56/568 (9%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E LE + KLT V VL+ + N + A FF+W ++ + + + +L+ L+
Sbjct: 799 ETALERFTGKLTTTVVGKVLQGVRNG-DAALGFFDWATSQEGYNHDTYTCNCLLQALLR- 856
Query: 143 DSLKQFWVTLRRMKEDHCYIEEETYLSIL--GVLKKAKKASDLAALNQF-HDGMVKEIAM 199
LK+ L+ + C +IL G+ + + L + G+ + + +
Sbjct: 857 --LKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVIL 914
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE- 258
NV + D ++ K++E+ D F + + + + K R V +
Sbjct: 915 HNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDM 974
Query: 259 -HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
G N +TY+ +L L + + + +++ M + G +I TY I K +
Sbjct: 975 VSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRI 1034
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
++A L E M+DG +P+V ++LL + + +GLV + K G +
Sbjct: 1035 DEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK----GYVPNLFT 1090
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + K + A +++ +M G P+ ++Y+ VI GLCKA + + +L++M
Sbjct: 1091 YNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 1150
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRAL------------------------LC------ 465
N C+PDI T+ +I C VD A LC
Sbjct: 1151 SNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD 1210
Query: 466 ----FAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+ M + D++ + +I+G KRV+ AYKL ++M+ L P T+
Sbjct: 1211 QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD-GLAPDDVTYSI 1269
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVK 575
+I L R ++EA N+L LM K + P + I F G ++ A E L+ LS
Sbjct: 1270 VISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKG 1329
Query: 576 EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
YP + + GR +A +LL
Sbjct: 1330 SYPDVVTFSIFIDWLSKRGRLRQAGELL 1357
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 194/486 (39%), Gaps = 50/486 (10%)
Query: 103 RKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
RKLD+ A F + + P YS ++ +LV + + M C
Sbjct: 926 RKLDS----ALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSP 981
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIG 220
TY S+L L KA K + AL Q M + N+ T++D D+
Sbjct: 982 NVVTYSSLLHGLCKAGKLDEATALLQR---MTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 1038
Query: 221 KKLEDMKIELSDNFVLTVLKELRIY-----PVKALGFFRWVGEHSGYKHNTITYNGILRV 275
LE+M V+T L + A+G + E GY N TYN +L +
Sbjct: 1039 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVE-KGYVPNLFTYNSLLDM 1097
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
+ + V ++ M ++G ++ +Y + K + + V L E M+ P
Sbjct: 1098 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPD 1157
Query: 336 VQDCSLLLRSISSINNPDLGL-VFRVANK---------YESLGNSLSKS----------- 374
+ + ++ ++ D+ +F + + Y SL + L KS
Sbjct: 1158 IVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLR 1217
Query: 375 -------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
Y+ + L K R D A K+ M + G PD++TYS VI LCK
Sbjct: 1218 EMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKW 1277
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
++A NVL+ M +NG P T+ LI G C +D+AL ++ K D
Sbjct: 1278 RFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTF 1337
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ I+ + R+ A +LL M+ + L P T+ TL++ A E+A++L +M+
Sbjct: 1338 SIFIDWLSKRGRLRQAGELLETML-RAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMR 1396
Query: 542 KQNYPP 547
+ P
Sbjct: 1397 QCGCEP 1402
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 123/568 (21%), Positives = 228/568 (40%), Gaps = 87/568 (15%)
Query: 90 SPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
+P L T+ +++ L K+ N E+A+ + K+ P S Y+ ++ L N L++
Sbjct: 612 APNLVTYNTLIDGLCKI-NKVEQAAEMLE-IMRKQSCTPDSITYTCLINGLCNASRLEEA 669
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
W LR MK+ C + TY ++L L +K ++L + Q ++KE+ +
Sbjct: 670 WRVLREMKDKGCLPDRMTYGTLLRAL---QKTNNLELVEQ----LLKEMEATEEGQ---- 718
Query: 209 VVLGSDWDDKIGKKLE------DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
W+ G +L D+ + + + + R+ K G+ S
Sbjct: 719 ------WNAN-GARLHRFVIRGDVLMMAMAVPMAALTSQTRVLDSK-----DQQGQFSPR 766
Query: 263 KHN-----TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
H T G + R + R W E E + + T + + + Q R
Sbjct: 767 PHQYRVTAVATQGGFHHKIVRILNSRFAWEYAET-ALERFTGKLTTTV-VGKVLQGVRNG 824
Query: 318 EDAVKLFEFMMDG-PYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV 375
+ A+ F++ Y C+ LL+++ + P L V+R NK N + ++
Sbjct: 825 DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQVYR--NKLCCSPNMFTFTI 882
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC---------------- 419
IH L + G A +++K M G + I ++ VI GLC
Sbjct: 883 L--IH-GLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEME 939
Query: 420 --------------------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
K+G+ +DAC ++++M GC P++ T++ L+ G C A ++
Sbjct: 940 ESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKL 999
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A +M + + +I+G R++ AY LL EM++ +P T+
Sbjct: 1000 DEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG-GCQPNVVTYTV 1058
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE 576
L++ + E+A+ L+ +M ++ Y P + K VE A + L ++ K
Sbjct: 1059 LLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKG 1118
Query: 577 -YPSSAAYLQVFESFFNEGRHYEAKDLL 603
P+ +Y V + +E LL
Sbjct: 1119 CVPNVVSYNTVIAGLCKATKVHEGVLLL 1146
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 43/354 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA- 180
+K + P+ Y+ +L KD +++ L M + C +Y +++ L KA K
Sbjct: 1081 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 1140
Query: 181 ---------------SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
D+ N D M K +D +A L +++ S +
Sbjct: 1141 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD-IAYELFNLIQESGCTPNL------ 1193
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
++ N ++ L + R + +A R + G + ITYN ++ L + + V
Sbjct: 1194 ----VTYNSLVHGLCKSRRFD-QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 1248
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ + +M +G D TY + K+R M++A + E M+ + P L+
Sbjct: 1249 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 1308
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA------LTKLGRFDEAEKMMKAM 399
N D L E L LSK Y + L+K GR +A ++++ M
Sbjct: 1309 FCKTGNLDKAL--------EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 1360
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
AG PD +TY+ ++ G C A EDA ++ + M + GC PD T+T L+ GH
Sbjct: 1361 LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV-GH 1413
Score = 43.5 bits (101), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 95/452 (21%), Positives = 177/452 (39%), Gaps = 81/452 (17%)
Query: 77 DWSDELENKLEE--LSPKL-THESVVYVL---RKLDNDPEKASAFFNWVCDKKQFRPSST 130
D + EL N ++E +P L T+ S+V+ L R+ D +A + K+ P
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFD----QAEYLLREMTRKQGCSPDII 1230
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK------AKKASDLA 184
Y+ ++ L + + + +M D ++ TY ++ L K A +L
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS-DNFVLTVLKELR 243
N F G + TL+D G + K LE +++ LS ++ V +
Sbjct: 1291 LKNGFDPGAI-------TYGTLID---GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340
Query: 244 IYPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
I + G R GE +G +T+TYN +L+ D ++ E M++ G
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400
Query: 298 EMDIDTYIKISRQFQKFRMMEDAV-KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
E D TY + + +D + ++ + M+D +K + + S L SI + LG
Sbjct: 1401 EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGC 1460
Query: 357 VFRVANKYESLGNSL-SKSVYDGIHR-------ALTKLGRFDEAEK----MMKAMKNAGF 404
+ + + G+ ++ V++G+ + A+ + F + E+ + + M G
Sbjct: 1461 A--IVDMFGKCGSPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGV 1518
Query: 405 EPDNITYSQVIFGLCKAGRFEDACN--------------------VLDEMEENG------ 438
EPD +T+ ++ C AG + A + V+D + G
Sbjct: 1519 EPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAE 1578
Query: 439 -------CIPDIKTWTILIQGHCAANEVDRAL 463
C P TW L+ + + +RAL
Sbjct: 1579 DLMLGMPCKPSAATWNCLLSAYKICGDFERAL 1610
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 210/467 (44%), Gaps = 45/467 (9%)
Query: 179 KASDLAALNQFHDGMVK-EIAMDNVAKTLVDV--VLGSDWDDKIGKKLEDMKIELSDNFV 235
KAS+ FH V+ +++ ++V++ + +L D K+ L + ++LS +
Sbjct: 40 KASNFTVYGSFHASSVETQVSANDVSQDADKICKILSKFTDSKVETLLNEASVKLSPALI 99
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
VLK+L V AL F+W G+KH T YN ++ L + + + WN+V++MK++
Sbjct: 100 EEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQK 159
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDL 354
+ DT+ ISR++ + R +++A+ F M D +K D + +L +S S N D
Sbjct: 160 KL-LSKDTFALISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDA 218
Query: 355 GLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
VF K + S ++ +G + L L R +E + MK+ GFEPD + Y
Sbjct: 219 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL-RVNE---VYGEMKDEGFEPDVVAYGI 274
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I CKA ++++A +EME+ C P + LI G + +++ AL F +
Sbjct: 275 IINAYCKAKKYDEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 334
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEM----------------------------- 504
+ +A + L+ + +R+ A+K + EM
Sbjct: 335 FPLEAPTYNALVGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAY 394
Query: 505 --IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+K+ P +T++ ++ RL+ A+ + MK + P F I+
Sbjct: 395 EVYQKMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 454
Query: 560 GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+++A E+ + L V P + ++ ++ +EGR + DL K
Sbjct: 455 NKLDEACEYFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVK 501
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 188/470 (40%), Gaps = 78/470 (16%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
++E L E S KL+ + VL+KL N A + F W ++K F+ +++ Y+ ++ +L
Sbjct: 82 KVETLLNEASVKLSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLG 141
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
K W + MK+ + ++T+ I +A+K + A+ FH
Sbjct: 142 KIKQFKLIWNLVDDMKQKKL-LSKDTFALISRRYARARKVKE--AITAFH---------- 188
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLED--MKIELSD-NFVLTVLKELRIYPVKALGFFRWVG 257
K+ED K+E SD N +L +L + R F +
Sbjct: 189 ---------------------KMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKM-- 225
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ ++ + +Y +L + ++ V EMK EG+E D+ Y I + K +
Sbjct: 226 KKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKY 285
Query: 318 EDAVKLFEFMMDGPYKPSVQD-CSLL--LRSISSIN---------------------NPD 353
++AV+ F M KPS CSL+ L S +N N
Sbjct: 286 DEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 345
Query: 354 LGL---------VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+G F+ ++ S G + YD I L ++ R EA ++ + M
Sbjct: 346 VGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKM---SC 402
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
EP TY ++ C R + A + DEM+ G +P + ++ LI C N++D A
Sbjct: 403 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 462
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
F +M++ L L L + R + L V+M RLR Q
Sbjct: 463 YFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADLAVKMD---RLRKTQ 509
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 15/293 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITY ++ L + V W V+ EM G ++ TY + + R + DA
Sbjct: 143 GCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDA 202
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
+ L M P+V L+ + + RV + L + + K
Sbjct: 203 LALMRDMTCRGCTPNVVTYGTLIDGLCKVG--------RVKDACAMLADMIDKGGTPDLM 254
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y+ + L K + DE+ +++ + G +PD +TYS VI+GLC++ R ++AC +L +
Sbjct: 255 IYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYV 314
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ GC PD+ ++ LI G C A +VD A + M DAD LI+G RV
Sbjct: 315 KSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRV 374
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A+ LL M+ ++ P T+ +LI+ L L+EA+ L+ M++ N P
Sbjct: 375 DEAHLLLARMV-RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 426
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 116/483 (24%), Positives = 201/483 (41%), Gaps = 44/483 (9%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ S++ L K +N+P++A F + + PS Y+ +L L L++
Sbjct: 11 VTYNSLIDGLCK-NNEPDRAQELFEHM-KSVECSPSMVTYNTLLDGLFRTGKLERAMALF 68
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
+ M + + + + G+ + K + L + D + +V L+D +
Sbjct: 69 QEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSV---LIDGLCK 125
Query: 213 SDWDDKIGKKLEDMKIELS--DNFVLTVLKELRIYPVKALGFFRWVGE--HSGYKHNTIT 268
++ + + LE MK D T+L + K + + E +G N +T
Sbjct: 126 ANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVT 185
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN +L L R V D ++ +M G ++ TY + K ++DA + M+
Sbjct: 186 YNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMI 245
Query: 329 DGPYKPSV-----------------QDCSLLLRSISSINNPDL--------GLV------ 357
D P + + +LL R++S PD+ GL
Sbjct: 246 DKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLD 305
Query: 358 --FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ +S G +Y + L K G+ DEA + + M G + D +TYS +I
Sbjct: 306 EACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLI 365
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKAGR ++A +L M G P T+ LI+G C N +D A+ +M N
Sbjct: 366 DGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCA 425
Query: 476 ADADLLDVLINGFLSQKRVN-GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
A ++LI+G +RV+ A EMI+ + P T+ L+E L ++ L E
Sbjct: 426 PSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVI-PDHITYSILLEGLKKSKDLHELR 484
Query: 535 NLL 537
+L+
Sbjct: 485 HLV 487
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 163/386 (42%), Gaps = 48/386 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN ++ L ++ + E MK + TY + + +E A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDG 378
+ LF+ M+D V ++L+ + + L F + + + S +V Y
Sbjct: 65 MALFQEMLD-RRSHDVISFNILVTGLCRAGKIETALEF-----FRKMDDRCSPNVITYSV 118
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K R +A +++++MK G PD ITY+ ++ GLCK + A VL EM + G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 439 CIPDIKTWTILIQGHCAANEVDRAL------------------------LC--------- 465
C+P++ T+ L+ G C A V AL LC
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 466 --FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
A M++K D + ++LING +V+ + LL + ++P T+ ++I
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG-GIKPDVVTYSSVIYG 297
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSS 580
L + RL+EA LL +K + PP + + K G V++A + + ++ +
Sbjct: 298 LCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDAD 357
Query: 581 AA-YLQVFESFFNEGRHYEAKDLLYK 605
Y + + GR EA LL +
Sbjct: 358 VVTYSTLIDGLCKAGRVDEAHLLLAR 383
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 153/348 (43%), Gaps = 20/348 (5%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M+ G E ++ TY + K + A +LFE M PS+ + LL +
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRT-- 58
Query: 352 PDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
G + R ++ + + S V ++ + L + G+ + A + + M + P+ I
Sbjct: 59 ---GKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVI 114
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TYS +I GLCKA R A +L+ M+ GC PD+ T+TIL+ G C ++V A +M
Sbjct: 115 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 174
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ + + L++G +RV+ A L+ +M + P T+ TLI+ L R
Sbjct: 175 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCR-GCTPNVVTYGTLIDGLCKVGR 233
Query: 530 LEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQ 585
+++A +L M + P + + K V+++ L +A+S P Y
Sbjct: 234 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSS 293
Query: 586 VFESFFNEGRHYEAKDLLY-----KCPHHIRQDSKISLLFGSAKSNKV 628
V R EA LL CP + S +L+ G K+ KV
Sbjct: 294 VIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS--TLIDGLCKAGKV 339
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + ++ + V D ++V +M++ G+ D+ Y I K ++ DA
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
V+LF+ M DG +V SL+ S D + R + + N ++ + +
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT---FTAV 250
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G+F EA K+ + M +PD TY+ +I GLC GR ++A +LD M GC
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ T+ LI G C + VD F +M ++ D + +I G+ R + A
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 369
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
E+ ++ RP T+ L+ L R+E+A+ L M+K + + +
Sbjct: 370 ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G VEDA + ++LS K S F R ++ DLLY+
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 7/291 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+E+ + LF M+ PS+ D S +L I+ N DL V + + E G Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDL--VISLFHHMEVCGIGHDLYSY 107
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L + RF A ++ M G+EPD +T S +I G C+ R DA +++ +MEE
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ + +I G C V+ A+ F +M ADA + L+ G R +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
A +L+ +M+ + + P TF +I+ + + EAM L M ++ P +
Sbjct: 228 AARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G V++A + L + K P Y + F R E L
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 51/354 (14%)
Query: 125 FRPSSTVYSLMLRN-----LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
FRP +Y+ ++ LVN D+++ F RM+ D + TY S++ L + +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVN-DAVELF----DRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI--ELSDNFVLT 237
SD A L ++++ M ++ ++ D K GK E MK+ E++ V
Sbjct: 225 WSDAARL-------MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV-- 275
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ TYN ++ L H V + +++ M +G
Sbjct: 276 -------------------------DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
D+ TY + F K + +++ KLF M + +++ PD
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 369
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ ++ +S N + S+ + L R ++A + + M+ + E D TY+ VI G
Sbjct: 370 -EIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+CK G EDA ++ + G PD+ ++T +I G C + D++ L + KM E
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 129 bits (325), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 172/376 (45%), Gaps = 10/376 (2%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY I R
Sbjct: 135 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 191
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A+ L + M+ +PSV ++LL ++ + G V ++ + G + + Y
Sbjct: 192 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVC--KSTGFGQAMEVLDEMRAKGCTPNIVTY 249
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D+A + + + + GF+PD ++Y+ V+ GLC A R+ED + EM E
Sbjct: 250 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 309
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C+P+ T+ +L++ C V+RA+ +M A+ L +++IN Q RV+
Sbjct: 310 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 369
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++ L M P ++ T+++ L A R E+A LL+ M ++N PP F +I
Sbjct: 370 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 428
Query: 557 SKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
G +E A+ ++ +S + Y + F +GR A +L Y P
Sbjct: 429 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNT 488
Query: 613 DSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 489 ITYTTLLTGLCNAERL 504
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 193/492 (39%), Gaps = 21/492 (4%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ +PS Y+++L + Q L M+ C TY I+ + + + D
Sbjct: 205 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 264
Query: 183 LAA-LNQF--HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
LN+ + ++ V K L D ++ + +E + F + V
Sbjct: 265 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 324
Query: 240 KELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
R V +A+ + H G NT N ++ + + V D + + M G
Sbjct: 325 FFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 383
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D +Y + + + EDA +L + M+ P+ + + + GL+
Sbjct: 384 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ-----KGLIE 438
Query: 359 RVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ E + G ++ Y+ + GR D A ++ +M +P+ ITY+ ++
Sbjct: 439 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLL 495
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLC A R + A +L EM + C P++ T+ +L+ C +D A+ +MME
Sbjct: 496 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 555
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + L++G A +LL ++ + P T+ ++I L R+EEA+
Sbjct: 556 PNLITYNTLLDGITKDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGVLSREDRVEEAIK 614
Query: 536 LLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+ +++ P + + + + T F +S P+ Y+ + E
Sbjct: 615 MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 674
Query: 592 NEGRHYEAKDLL 603
NE E +DLL
Sbjct: 675 NEDFLKETRDLL 686
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 97/215 (45%), Gaps = 8/215 (3%)
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A +++ + G PD +++I LC+ GR DA VL E +G D+ + L+
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G+C ++D A A M DA +I G + RV A LL +M+ + +
Sbjct: 153 GYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GCQ 208
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
P T+ L+E + + +AM +L M+ + P + + + + G V+DA EF
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268
Query: 569 LKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
L LS + P + +Y V + R + ++L
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 303
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N + +L + + ++E+M + G E++I TY + F ++ A++LF
Sbjct: 420 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 479
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
M P KP+ + LL + + R+ E L L K ++
Sbjct: 480 YSM---PCKPNTITYTTLLTGLCNAE--------RLDAAAELLAEMLQKDCAPNVVTFNV 528
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + G DEA ++++ M G P+ ITY+ ++ G+ K E+A +L + NG
Sbjct: 529 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 588
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PDI T++ +I + V+ A+ F + + A + + ++ + +GA
Sbjct: 589 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 648
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
M+ + P + T+ TLIE L L+E +LLR
Sbjct: 649 DFFAYMVSNGCM-PNELTYITLIEGLANEDFLKETRDLLR 687
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 163/350 (46%), Gaps = 13/350 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + ++ + V D ++V +M++ G+ D+ Y I K ++ DA
Sbjct: 75 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 134
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
V+LF+ M DG +V SL+ S D + R + + N ++ + +
Sbjct: 135 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT---FTAV 191
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G+F EA K+ + M +PD TY+ +I GLC GR ++A +LD M GC
Sbjct: 192 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ T+ LI G C + VD F +M ++ D + +I G+ R + A
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 310
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
E+ ++ RP T+ L+ L R+E+A+ L M+K + + +
Sbjct: 311 ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 367
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G VEDA + ++LS K P +Y + F + R ++ DLLY+
Sbjct: 368 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRK-RQWDKSDLLYR 416
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 119/274 (43%), Gaps = 7/274 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS+ D S +L I+ N DL V + + E G Y+ + L + RF A
Sbjct: 8 PSIVDFSKVLSKIAKSKNYDL--VISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 65
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M G+EPD +T S +I G C+ R DA +++ +MEE G PD+ + +I G
Sbjct: 66 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 125
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C V+ A+ F +M ADA + L+ G R + A +L+ +M+ + + P
Sbjct: 126 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR-DIVPN 184
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
TF +I+ + + EAM L M ++ P + + G V++A + L
Sbjct: 185 VITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLD 244
Query: 571 ALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K P Y + F R E L
Sbjct: 245 LMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 278
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 51/354 (14%)
Query: 125 FRPSSTVYSLMLRN-----LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
FRP +Y+ ++ LVN D+++ F RM+ D + TY S++ L + +
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVN-DAVELF----DRMERDGVRADAVTYNSLVAGLCCSGR 165
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI--ELSDNFVLT 237
SD A L ++++ M ++ ++ D K GK E MK+ E++ V
Sbjct: 166 WSDAARL-------MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV-- 216
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ TYN ++ L H V + +++ M +G
Sbjct: 217 -------------------------DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 251
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
D+ TY + F K + +++ KLF M + +++ PD
Sbjct: 252 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 310
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ ++ +S N + S+ + L R ++A + + M+ + E D TY+ VI G
Sbjct: 311 -EIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 366
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+CK G EDA ++ + G PD+ ++T +I G C + D++ L + KM E
Sbjct: 367 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 420
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 172/376 (45%), Gaps = 10/376 (2%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY I R
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A+ L + M+ +PSV ++LL ++ + G V ++ + G + + Y
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK--STGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D+A + + + + GF+PD ++Y+ V+ GLC A R+ED + EM E
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C+P+ T+ +L++ C V+RA+ +M A+ L +++IN Q RV+
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++ L M P ++ T+++ L A R E+A LL+ M ++N PP F +I
Sbjct: 339 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 557 SKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
G +E A+ ++ +S + Y + F +GR A +L Y P
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNT 457
Query: 613 DSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 458 ITYTTLLTGLCNAERL 473
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 194/492 (39%), Gaps = 21/492 (4%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ +PS Y+++L + Q L M+ C TY I+ + + + D
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 183 LAA-LNQF--HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
LN+ + ++ V K L D ++ + +E + F + V
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293
Query: 240 KELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
R V +A+ + H G NT N ++ + + V D + + M G
Sbjct: 294 FFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D +Y + + + EDA +L + M+ P+ + + + GL+
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ-----KGLIE 407
Query: 359 RVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ E + G ++ Y+ + GR D A ++ +M +P+ ITY+ ++
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLL 464
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLC A R + A +L EM + C P++ T+ +L+ C +D A+ +MME
Sbjct: 465 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 524
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + L++G + A +LL ++ + P T+ ++I L R+EEA+
Sbjct: 525 PNLITYNTLLDGITNDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGVLSREDRVEEAIK 583
Query: 536 LLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+ +++ P + + + + T F +S P+ Y+ + E
Sbjct: 584 MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643
Query: 592 NEGRHYEAKDLL 603
NE E +DLL
Sbjct: 644 NEDFLKETRDLL 655
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA +++ + G PD +++I LC+ GR DA VL E +G D+ + L+
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G+C ++D A A M DA +I G + RV A LL +M+ +
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GC 176
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
+P T+ L+E + + +AM +L M+ + P + + + + G V+DA E
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
FL LS + P + +Y V + R + ++L
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 18/280 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N + +L + + ++E+M + G E++I TY + F ++ A++LF
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
M P KP+ + LL + + R+ E L L K ++
Sbjct: 449 YSM---PCKPNTITYTTLLTGLCNAE--------RLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + G DEA ++++ M G P+ ITY+ ++ G+ E+A +L + NG
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNG 557
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PDI T++ +I + V+ A+ F + + A + + ++ + +GA
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
M+ + P + T+ TLIE L L+E +LLR
Sbjct: 618 DFFAYMVSNGCM-PNELTYITLIEGLANEDFLKETRDLLR 656
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 172/376 (45%), Gaps = 10/376 (2%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY I R
Sbjct: 104 AERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGR 160
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A+ L + M+ +PSV ++LL ++ + G V ++ + G + + Y
Sbjct: 161 VGEALSLLDDMLHRGCQPSVVTYTVLLEAVCK--STGFGQAMEVLDEMRAKGCTPNIVTY 218
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D+A + + + + GF+PD ++Y+ V+ GLC A R+ED + EM E
Sbjct: 219 NVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME 278
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C+P+ T+ +L++ C V+RA+ +M A+ L +++IN Q RV+
Sbjct: 279 KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDD 338
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++ L M P ++ T+++ L A R E+A LL+ M ++N PP F +I
Sbjct: 339 AFQFLNNM-GSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 557 SKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
G +E A+ ++ +S + Y + F +GR A +L Y P
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNT 457
Query: 613 DSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 458 ITYTTLLTGLCNAERL 473
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 100/492 (20%), Positives = 193/492 (39%), Gaps = 21/492 (4%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ +PS Y+++L + Q L M+ C TY I+ + + + D
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 183 LAA-LNQF--HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
LN+ + ++ V K L D ++ + +E + F + V
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293
Query: 240 KELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
R V +A+ + H G NT N ++ + + V D + + M G
Sbjct: 294 FFCRGGMVERAIQVLEQMSGH-GCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCS 352
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D +Y + + + EDA +L + M+ P+ + + + GL+
Sbjct: 353 PDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ-----KGLIE 407
Query: 359 RVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ E + G ++ Y+ + GR D A ++ +M +P+ ITY+ ++
Sbjct: 408 QATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLL 464
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLC A R + A +L EM + C P++ T+ +L+ C +D A+ +MME
Sbjct: 465 TGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCT 524
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + L++G A +LL ++ + P T+ ++I L R+EEA+
Sbjct: 525 PNLITYNTLLDGITKDCNSEEALELLHGLVSN-GVSPDIVTYSSIIGVLSREDRVEEAIK 583
Query: 536 LLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+ +++ P + + + + T F +S P+ Y+ + E
Sbjct: 584 MFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLA 643
Query: 592 NEGRHYEAKDLL 603
NE E +DLL
Sbjct: 644 NEDFLKETRDLL 655
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 98/216 (45%), Gaps = 8/216 (3%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA +++ + G PD +++I LC+ GR DA VL E +G D+ + L+
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G+C ++D A A M DA +I G + RV A LL +M+ +
Sbjct: 121 AGYCRYGQLDAARRLIASM---PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHR-GC 176
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
+P T+ L+E + + +AM +L M+ + P + + + + G V+DA E
Sbjct: 177 QPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARE 236
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
FL LS + P + +Y V + R + ++L
Sbjct: 237 FLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEEL 272
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 125/280 (44%), Gaps = 18/280 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N + +L + + ++E+M + G E++I TY + F ++ A++LF
Sbjct: 389 NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELF 448
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
M P KP+ + LL + + R+ E L L K ++
Sbjct: 449 YSM---PCKPNTITYTTLLTGLCNAE--------RLDAAAELLAEMLQKDCAPNVVTFNV 497
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + G DEA ++++ M G P+ ITY+ ++ G+ K E+A +L + NG
Sbjct: 498 LVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNG 557
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PDI T++ +I + V+ A+ F + + A + + ++ + +GA
Sbjct: 558 VSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
M+ + P + T+ TLIE L L+E +LLR
Sbjct: 618 DFFAYMVSNGCM-PNELTYITLIEGLANEDFLKETRDLLR 656
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 162/343 (47%), Gaps = 12/343 (3%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
TL+ GS D K LED I++S + V+ VLK L V AL FF W + G+K+
Sbjct: 100 TLLSTHSGSHAD----KLLEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKY 155
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT +YN ++ L + + + ++V EMK ++ DT+ ISR+ + R +E+A++ F
Sbjct: 156 NTESYNALIEALGKIKQFKLIRSLVNEMKSRKL-LNKDTFALISRRHARARKVEEAIEAF 214
Query: 325 EFMMDGPYKPSVQDCSLLLRSI-SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E M + +K D + LL ++ S + VF K + + S ++
Sbjct: 215 ERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKE 274
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
L R DE + MK GFEPD +TY +I CKA +++ A + EME C P
Sbjct: 275 HNLLRLDE---VYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTP 331
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+ LI G + + AL F + + +A + L+ + R++ A++++ E
Sbjct: 332 HVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDE 391
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
M K P T+ ++ L+ ARR EA R K N P
Sbjct: 392 M-RKHSAGPNSRTYDIILHHLIKARRTNEAY--FRFQKMSNEP 431
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 197/466 (42%), Gaps = 41/466 (8%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
LE+ S K++ VV VL++L N A +FF W +K F+ ++ Y+ ++ L
Sbjct: 114 LEDASIKVSPSLVVEVLKRLSNAGVIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQF 173
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFHD-GMVKEIAMDNVA 203
K + MK + ++T+ I +A+K + + A + + G E + N
Sbjct: 174 KLIRSLVNEMKSRK-LLNKDTFALISRRHARARKVEEAIEAFERMEEFGFKLETSDFN-- 230
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
L+D + S +K K + MK FV +++ Y + G W G +
Sbjct: 231 -RLLDTLCKSRHVEKANKVFDKMK---KRRFV----PDIKSYTILLEG---W-----GKE 274
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
HN + + V EMK +G+E D+ TY + + K + + A++L
Sbjct: 275 HNLLRLD----------------EVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIEL 318
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F M KP+ L+ + S L F +++S G + Y+ + A
Sbjct: 319 FHEMEAKNCKPTPHVYCTLINGLGSEKRLSEALEF--FERFKSCGFTPEAPTYNSLVGAY 376
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME-ENGCIPD 442
R D+A +++ M+ P++ TY ++ L KA R +A +M E GC P
Sbjct: 377 CWSMRIDDAFQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPT 436
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ I+++ C + VD A + +M K + LI + ++ A K
Sbjct: 437 VSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQ 496
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
EM++ +RP F L + LL + +EA+NL R + K P
Sbjct: 497 EMLD-AGIRPPAKMFSNLKQALLDEGKNDEALNLARKINKLRGTPL 541
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 163/327 (49%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK+ELS + ++ VL+ R A FF W E G+ H++ TYN ++ +LA+
Sbjct: 161 LDEMKVELSHDLIVKVLERFRHARKPAFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQF 220
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 221 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 279
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 280 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 334
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 335 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 394
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 395 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 453
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + + E A + M + P
Sbjct: 454 IKLMANQKMPEHATRIYNKMIQNEIEP 480
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 96/457 (21%), Positives = 185/457 (40%), Gaps = 46/457 (10%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ +L+H+ +V VL + + + A F
Sbjct: 134 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKVELSHDLIVKVLERFRHARKPAFRF 190
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +K+ F S Y+ M+ L + L M + ET+ +
Sbjct: 191 FCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 249
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 250 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 304
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
++ T+ NG RV E+ R WN +M +
Sbjct: 305 PNMMT------------------------YTVLLNGWCRVRNLIEAAR-IWN---DMIDQ 336
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + DI + + + R DA+KLF M P+V+ ++++R ++ +
Sbjct: 337 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 396
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ + + G +VY + + D +++K M+ G PD TY+ +I
Sbjct: 397 IEY--FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 454
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ E A + ++M +N P I T+ ++++ + A + + +M++K
Sbjct: 455 KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGIC 514
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
D + VLI G + + + A + L EM++K P
Sbjct: 515 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTP 551
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/290 (31%), Positives = 145/290 (50%), Gaps = 11/290 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N ITYN +L L + D + E M K GY D+ TY + F K +++A
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEA 139
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDG 378
+K+F+ + + P V + L+ + D R+ + S SL V Y+
Sbjct: 140 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQ--RILQRMVS--ESLVPDVVTYNS 195
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-GRFEDACNVLDEMEEN 437
+ L K GR DEA + + + GF P+ ITYS +I GLC+ R E A +L++M N
Sbjct: 196 LVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLN 252
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PDI ++ LI G V AL F ++ + Y+ + ++LI+G L + RVN A
Sbjct: 253 GCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEA 312
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++L ++ K L P T+ I+ L A R+E+A+ +L+ M ++ P
Sbjct: 313 FELFSGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 361
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/473 (26%), Positives = 201/473 (42%), Gaps = 69/473 (14%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K F P+ Y+ +L L N + RM + + TY ++L K K
Sbjct: 78 KHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLD 137
Query: 182 DLAALNQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMKIE-------LSD 232
+ AL F DG VK + +V L++ +D D+ + L+ M E +
Sbjct: 138 E--ALKIF-DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYN 194
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN----GILRVLARHESVRDFWNV 288
+ V + K R+ + L G+ N ITY+ G+ R L R ES R +
Sbjct: 195 SLVNGLCKNGRVDEARMLIV------DKGFSPNVITYSTLISGLCRELRRLESAR---QL 245
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+E+M G + DI +Y + + + + +A+KLF ++ Y+P V ++L+
Sbjct: 246 LEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILI----- 300
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
DG L K R +EA ++ + G EPD
Sbjct: 301 ----------------------------DG----LLKEDRVNEAFELFSGLVKHGLEPDA 328
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
ITY+ I GLCKAGR EDA +L +M+E GC+PD+ + +I G C VD A + +
Sbjct: 329 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSG 388
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M K +A + LI G + A EM+++ ++P T+ L++ L AR
Sbjct: 389 MEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR-GVKPTVVTYNILVDGLCKAR 447
Query: 529 ---RLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVK 575
R++EA+ L M ++ P + + K G ++DA L A+ K
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 500
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 160/352 (45%), Gaps = 12/352 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + ++YN ++ LAR + V + + + ++GYE ++ TY + K + +
Sbjct: 252 NGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNE 311
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDG 378
A +LF ++ +P ++ + + D L+ + ++ + + +S ++
Sbjct: 312 AFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS---HNA 368
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K R DEAE ++ M+ G P+ I+++ +I G C+AG+++ A EM + G
Sbjct: 369 VINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRG 428
Query: 439 CIPDIKTWTILIQGHCAANEVDR---ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
P + T+ IL+ G C A + R A+ F M+EK D LI+G +++
Sbjct: 429 VKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLD 488
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +LL M E P T+ +LI L G +++EA+ L M ++ P +
Sbjct: 489 DARRLLGAM-EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI 547
Query: 556 ISKFGTVEDASEFLK----ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
IS E + L +L P+S Y + + R EA LL
Sbjct: 548 ISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLL 599
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/498 (24%), Positives = 203/498 (40%), Gaps = 70/498 (14%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ ++++ K+ E F V K+ F P Y+ ++ D L + L
Sbjct: 121 VTYNTLLHGFCKVGKLDEALKIFDGAV--KRGFVPDVVTYNALINGFCKADKLDEAQRIL 178
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL-------------NQFHDGMVKEIAM 199
+RM + + TY S++ L K + + L + G+ +E+
Sbjct: 179 QRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRR 238
Query: 200 DNVAKTLVD--VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
A+ L++ V+ G D I + + + +E + +AL F V
Sbjct: 239 LESARQLLEKMVLNGCKPD-----------IVSYNALIHGLAREQGVS--EALKLFGSV- 284
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
GY+ TYN ++ L + + V + + + + K G E D TY K +
Sbjct: 285 LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 344
Query: 318 EDAVKLFEFMMDGPYKPSV----------------QDCSLLLRSISSINNPDLGLVFRV- 360
EDA+ + + M + P V + +LL + + + F
Sbjct: 345 EDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTL 404
Query: 361 ------ANKY--------ESLGNSLSKSVY------DGIHRALTKLGRFDEAEKMMKAMK 400
A K+ E L + +V DG+ +A + GR EA + AM
Sbjct: 405 ICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQE-GRIKEAITLFDAMI 463
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G PD +TYS +I GL KAG+ +DA +L ME GCIP++ T+ LI G C ++VD
Sbjct: 464 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVD 523
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
AL F M+EK D +I+ Q+ V+ A L +E + P + +L
Sbjct: 524 EALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLE-AGVVPTSGMYFSL 582
Query: 521 IEKLLGARRLEEAMNLLR 538
I+ L R++EA+ LL+
Sbjct: 583 IDGLCAVARVDEALKLLQ 600
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 115/261 (44%), Gaps = 12/261 (4%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L GR +A+ + + M AG+ PD +TY+ ++ G CK G+ ++A + D
Sbjct: 88 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAV 147
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G +PD+ T+ LI G C A+++D A +M+ ++ D + L+NG RV+
Sbjct: 148 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVD 207
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA-RRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A L+V+ P T+ TLI L RRLE A LL M P +
Sbjct: 208 EARMLIVDK----GFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNA 263
Query: 555 YISKFGTVEDASEFLK----ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-CPHH 609
I + SE LK L P Y + + E R EA +L H
Sbjct: 264 LIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHG 323
Query: 610 IRQDSKISLLF--GSAKSNKV 628
+ D+ +F G K+ +V
Sbjct: 324 LEPDAITYTVFIDGLCKAGRV 344
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 1/156 (0%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + R +A+ + M+ GF P+ ITY+ ++ GLC GR DA + + M + G P
Sbjct: 59 GLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSP 118
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ L+ G C ++D AL F +++ + D + LINGF +++ A ++L
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
M+ + L P T+ +L+ L R++EA L+
Sbjct: 179 QRMVSE-SLVPDVVTYNSLVNGLCKNGRVDEARMLI 213
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 200/434 (46%), Gaps = 14/434 (3%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K F P YS ++ L + + + M E + TY I+ L +A K
Sbjct: 3 EKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVD 62
Query: 182 DLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVL-T 237
+ L FH + + + + VA L++ + + ++ K LE+M K DN T
Sbjct: 63 EADEL--FHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 238 VLKEL-RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
+L L R+ V F GY + + YNG+L L + V + W + + M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 297 YEM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP-SVQDCSLLLRSISSINNPD 353
++ D+ TY + F + ++A+KLF+ ++ Y P +V S+LL N +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+F+ K G + + + Y + ++G ++ + M F PD + +
Sbjct: 241 AEEMFK---KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
VI LCKA + +DA VL+EM + G +PD+ T+ IL+ G C N VD+A F+ M++
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D V++NG +V+ A L MIE+ +L P TF L++ L A +L+EA
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER-KLVPDVVTFNILMDGLCKAGKLDEA 416
Query: 534 MNLLRLMKKQNYPP 547
+LL +M + N P
Sbjct: 417 KDLLDVMSEHNVLP 430
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 163/355 (45%), Gaps = 21/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+ YN ++ L + E++ + ++EEM +GYE D TY I + + +A
Sbjct: 75 GCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVSEA 134
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-----V 375
+ F+ M Y P V + LL ++ G V ++++ + K
Sbjct: 135 KQFFDSMPSRGYSPDVVAYNGLLDALYK-----EGKVAEAWGLFKTMDMADRKVAPDLIT 189
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + ++ + DEA K+ K + G+ PD +TY+ ++ GL + ++A + +M
Sbjct: 190 YNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 249
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
++GC P+ T++I++ GHC + R L + +M EK + D L + +I+ K+V+
Sbjct: 250 DSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVD 309
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A+K+L EM K+ P T+ L++ L +++A L M P V Y
Sbjct: 310 DAHKVLEEM-SKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAP---DIVSY 365
Query: 556 ------ISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K V DA F + + K P + + + G+ EAKDLL
Sbjct: 366 SVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLL 420
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 152/351 (43%), Gaps = 15/351 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY +T+TYN IL LAR ++ + + ++M G + TY + + M
Sbjct: 217 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARC 276
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L+E M + + P V C+ ++ + D +V + +G Y+ +
Sbjct: 277 LELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDA--HKVLEEMSKIGAVPDVVTYNILL 334
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K D+A ++ M + G PD ++YS V+ GLCK + DA + D M E +
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 394
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ IL+ G C A ++D A M E N D L++G KR + A +L
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454
Query: 501 LVEMIEK---VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PF 552
M+EK + P L + +L +A+ + M K + P+
Sbjct: 455 FQYMVEKGTVADVLPHNIVLAGLCRE----GKLAQALLFFKSMVKSDGEFSPDVVTYTTL 510
Query: 553 VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
V + + G V+ A ++ + ++ P AY + +GRH +A L
Sbjct: 511 VNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRL 561
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 11/217 (5%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GFEPD +TYS +I GLCK G+ +A +++EM E G PD+ T+TI++ C A +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
VD A F KM+E+ A+ + LING + + AYKLL EM K P T+
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASK-GYEPDNITYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSV- 574
T++ L ++ EA M + Y P + + + K G V +A K + +
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179
Query: 575 --KEYPSSAAYLQVFESFFNEGRHYEA----KDLLYK 605
K P Y + + F + EA KD++ K
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAK 216
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 148/329 (44%), Gaps = 9/329 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +TY+ I+ L + V + +VEEM ++G D+ TY I + + +++A
Sbjct: 5 GFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEA 64
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF M++ + + L+ + N + +++ + S G Y+ I
Sbjct: 65 DELFHKMIERGCSANTVAYNALINGLCKDEN--IERAYKLLEEMASKGYEPDNITYNTIL 122
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD--EMEENG 438
L ++G+ EA++ +M + G+ PD + Y+ ++ L K G+ +A + +M +
Sbjct: 123 SGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRK 182
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+ T+ LI G C + D A+ F ++ K Y D + ++ G + ++ A
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
++ +M++ P AT+ ++ + + L M ++ + P +
Sbjct: 243 EMFKKMVDS-GCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDM 301
Query: 556 ISKFGTVEDASEFLKALS-VKEYPSSAAY 583
+ K V+DA + L+ +S + P Y
Sbjct: 302 LCKAKKVDDAHKVLEEMSKIGAVPDVVTY 330
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 118/258 (45%), Gaps = 5/258 (1%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G+E D+ TY I K + +A+++ E M + P V ++++ +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
D + +K G S + Y+ + L K + A K+++ M + G+EPDNITY
Sbjct: 61 VDEA--DELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITY 118
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ GLC+ G+ +A D M G PD+ + L+ +V A F M
Sbjct: 119 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDM 178
Query: 472 KNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ DL+ + LI+GF ++ + A KL ++I K + P T+ +++ L
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYM-PDTVTYNSILLGLARKSN 237
Query: 530 LEEAMNLLRLMKKQNYPP 547
++EA + + M P
Sbjct: 238 MDEAEEMFKKMVDSGCAP 255
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 103/236 (43%), Gaps = 7/236 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L K G+ EA +M++ M G PD TY+ ++ LC+AG+ ++A + +M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADELFHKMI 72
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E GC + + LI G C ++RA +M K Y+ D + +++G +V+
Sbjct: 73 ERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLCRMGKVS 132
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE--PFV 553
A + M + P + L++ L ++ EA L + M + P+ +
Sbjct: 133 EAKQFFDSMPSR-GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191
Query: 554 QYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I F VE +A + K + K Y P + Y + + EA+++ K
Sbjct: 192 TLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKK 247
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/476 (21%), Positives = 197/476 (41%), Gaps = 64/476 (13%)
Query: 86 LEELSPK------LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
LEE++ K +T+ +++ L ++ E A FF+ + + + P Y+ +L L
Sbjct: 103 LEEMASKGYEPDNITYNTILSGLCRMGKVSE-AKQFFDSM-PSRGYSPDVVAYNGLLDAL 160
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEE--TYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
+ + + W + M + + TY +++ + +K + A+ F D + K
Sbjct: 161 YKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDE--AMKLFKDVIAKGY 218
Query: 198 AMDNVAKTLVDVVLG------SDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPV-KA 249
D V T ++LG D +++ KK+ D + + + + R+ + +
Sbjct: 219 MPDTV--TYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARC 276
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
L + + E + + + N ++ +L + + V D V+EEM K G D+ TY +
Sbjct: 277 LELYEEMTEKR-FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLD 335
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLG 368
K +++ A +LF M+D P + S++L + N D ++F + + +
Sbjct: 336 GLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP 395
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ ++ ++ + L K G+ DEA+ ++ M PD +T + ++ GLC+ R ++A
Sbjct: 396 DVVT---FNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAV 452
Query: 429 NVLDEMEENGCI-------------------------------------PDIKTWTILIQ 451
+ M E G + PD+ T+T L+
Sbjct: 453 RLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVN 512
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
A VD+A+ F +M D + L+NG Q R A +L M EK
Sbjct: 513 ALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 568
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 82/179 (45%), Gaps = 2/179 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+N ++ L + + + ++++ M + D T + + + ++AV+LF
Sbjct: 396 DVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLF 455
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN-SLSKSVYDGIHRAL 383
++M++ V +++L + L+F + +S G S Y + AL
Sbjct: 456 QYMVEKGTVADVLPHNIVLAGLCREGKLAQALLF-FKSMVKSDGEFSPDVVTYTTLVNAL 514
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ GR D+A + M +G PD + Y+ ++ GL K GR A + M+E G + D
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 573
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 121/486 (24%), Positives = 212/486 (43%), Gaps = 56/486 (11%)
Query: 188 QFHDGMVKEIAM-DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
Q H +++A +++ + ++D++ I ++LE + L V VL+ L+ P
Sbjct: 48 QLHLSTARKLARSESLQQDVLDLLGLLQSGSNIRERLEQWRGTLQPAVVSRVLQRLK-DP 106
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A+ FF W G+ G+KH+T T N L+ L + S + E M GY D TY
Sbjct: 107 QTAIVFFVWAGDR-GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHL 165
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-------------SINNPD 353
+ + + ++ A + + +KP V ++L R+ +I +PD
Sbjct: 166 VIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPD 225
Query: 354 L----GLVFRVANKYESLG----------NSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
++ K + G ++ V Y+ + L K + D+A +M+
Sbjct: 226 AIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLH 285
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M + G PD +T++ ++ GLCKAG+FE A ++L M E C P T+ LI G C
Sbjct: 286 EMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQ 345
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
VDRA + + + D +L +G + R++ A++L+ EM K P T+
Sbjct: 346 NVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGK-GCTPNLVTY 404
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSV 574
TLI+ L A + E+A LL + + P + V + K G ++ A + ++ +
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD-----------SKISLLFGS 622
+ PS Y + E GR EA HHI ++ + +SL+ G
Sbjct: 465 RGCTPSVITYTALMEGLCRTGRVDEA--------HHIFKEMVSKDCTADALAYVSLVNGY 516
Query: 623 AKSNKV 628
KS++
Sbjct: 517 CKSSRT 522
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/503 (22%), Positives = 216/503 (42%), Gaps = 82/503 (16%)
Query: 123 KQFRPSSTVYSLMLRNLVN----KDSLKQF-------WVTLRRMKEDHCYIEE-ETYLSI 170
+ F+P +VY+++ R KD+L+ F + + HC + + L
Sbjct: 189 RGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPSPDAIAYNAIIHGHCRKNDCDGALEF 248
Query: 171 LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDWDDKIGKKLEDM--- 226
L + + K A D+ N DG+ K D ++ L ++V G D + D
Sbjct: 249 LKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCK 308
Query: 227 --KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
K E + + L V+ E P + TYN ++ L + ++V
Sbjct: 309 AGKFERAHSL-LAVMAERNCRP------------------SCCTYNTLISGLCKQQNVDR 349
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
++V+E G+ D+ TY ++ K +++A +L + M S + C+
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEM-------SGKGCT---- 398
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
P+L Y+ + L K + ++A ++++++ ++GF
Sbjct: 399 -------PNL-------------------VTYNTLIDGLCKASKTEKAYELLESLVSSGF 432
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD +TY+ ++ GLCK GR + A +++ M + GC P + T+T L++G C VD A
Sbjct: 433 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 492
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M+ K+ ADA L+NG+ R A K+ ++ +R P+ + L++
Sbjct: 493 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV----VDGIRGTPYIDVYNALMDGY 548
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSS 580
RL+E N+ M + P + + + + K G V++A FL+++ S P
Sbjct: 549 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 608
Query: 581 AAYLQVFESFFNEGRHYEAKDLL 603
+Y + + F + EA+ +L
Sbjct: 609 VSYNIIIDGLFKASKPKEARQVL 631
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 186/456 (40%), Gaps = 50/456 (10%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F P YS++ L + + + + ++ M C TY +++ L KA K
Sbjct: 362 FVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAY 421
Query: 185 AL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
L + G V ++ + +VD + DK K +E M LK
Sbjct: 422 ELLESLVSSGFVPDVVTYTI---IVDGLCKEGRLDKALKMVEGM------------LKR- 465
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
G + ITY ++ L R V + ++ +EM + D
Sbjct: 466 ------------------GCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADAL 507
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y+ + + K ++A K+ + + PY + + L+ D + N
Sbjct: 508 AYVSLVNGYCKSSRTKEAQKVVDGIRGTPY---IDVYNALMDGYCKEGRLD-----EIPN 559
Query: 363 KYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+E + G + Y+ + L K G+ DEA +++M +AG PD ++Y+ +I GL
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KA + ++A VLD+M + G PD T+ L+ C D A+ M++ D D
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ LI+G R+ AY+L+ EM+ + T+ T+I++L L++A+ L+
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739
Query: 540 MKKQNYPPFP---EPFVQYISKFGTVEDASEFLKAL 572
M F+ + K G +++AS L +
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 39/372 (10%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ + + + NV E+M G +I TY + K +++A E M
Sbjct: 541 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 600
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P V ++++ + + P +V ++ G Y+ + K R
Sbjct: 601 SAGCVPDVVSYNIIIDGLFKASKPKEAR--QVLDQMIQAGIPPDAVTYNTLMAQFCKEER 658
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI-PDIKTWT 447
FD+A ++K M AG +PDN+TY+ +I GL + R DA ++ EM NGC+ T+
Sbjct: 659 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 718
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN--------------------- 486
+I C + +ALL M +A+ ++ I+
Sbjct: 719 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 778
Query: 487 -----------GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
G ++++ A KL EM+ L TF LI+ +RL+EA+
Sbjct: 779 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 838
Query: 536 LLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFF 591
LL LM ++ P + + + K V+ A E ++V+ SS +Y +
Sbjct: 839 LLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 898
Query: 592 NEGRHYEAKDLL 603
+GR EA +L
Sbjct: 899 GQGRGKEALQVL 910
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/464 (21%), Positives = 166/464 (35%), Gaps = 95/464 (20%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ PS Y+ ++ L + + + M C + Y+S++ K+ +
Sbjct: 464 KRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTK 523
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+ + DG+ +D V L+D D+I EDM +
Sbjct: 524 EA---QKVVDGIRGTPYID-VYNALMDGYCKEGRLDEIPNVFEDMACR-------GCVPN 572
Query: 242 LRIYPVKALGFFRW--VGE--------HS-GYKHNTITYNGILRVLARHESVRDFWNVVE 290
++ Y + G + V E HS G + ++YN I+ L + ++ V++
Sbjct: 573 IKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLD 632
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + G D TY + QF K +DAV + + M+ P + L+ +S N
Sbjct: 633 QMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTN 692
Query: 351 NPD-----------LGLVFRVANKYESLGNSLSKS-----------------------VY 376
G V Y ++ + L K Y
Sbjct: 693 RLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTY 752
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA--------------- 421
+ L K GR DEA ++ M D ++Y+ VI GLCKA
Sbjct: 753 NIFIDRLCKEGRLDEASSLLSEMDTL---RDEVSYTTVIIGLCKAEQLDRASKLAREMVA 809
Query: 422 ---------------------GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
R ++A +L M + GC P + T+ ++I C ++VD
Sbjct: 810 VKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVD 869
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+A F +M + A + VLI G Q R A ++L EM
Sbjct: 870 KAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 95/213 (44%), Gaps = 10/213 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKLFEF 326
TYN I+ L + ++ +++ M G E + TY I I R ++ R+ E + L E
Sbjct: 716 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE- 774
Query: 327 MMDGPYKPSVQD-CSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVYDGIHRALT 384
MD +++D S I L ++A + ++ G ++ ++ + A T
Sbjct: 775 -MD-----TLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFT 828
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K R DEA ++ M G P ITY+ VI LCK + + A + DEM G +
Sbjct: 829 KTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSV 888
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
++T+LI G C AL +M + + D
Sbjct: 889 SYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 921
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 30/199 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI-------------KI 307
G + NT+TYN + L + + + +++ EM E+ T I K+
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 803
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+R+ + + F ++D K D +L L LGL+ +
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL----------LGLMVQ-------R 846
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S S Y+ + L KL + D+A ++ M G +++Y+ +I+GLC GR ++A
Sbjct: 847 GCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEA 906
Query: 428 CNVLDEMEENGCIPDIKTW 446
VL+EM + C D W
Sbjct: 907 LQVLEEMASSDCEIDDLKW 925
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 172/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKEGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+C +++ A F +M KN + LI G+
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKVGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 45/467 (9%)
Query: 179 KASDLAALNQFHDGMVK-EIAMDNVAKTLVDV--VLGSDWDDKIGKKLEDMKIELSDNFV 235
KAS+ FH V+ +++ ++ ++ + +L D K+ L + ++LS +
Sbjct: 38 KASNFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALI 97
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
VLK+L V AL F+W G+KH T YN ++ L + + + W++V++MK +
Sbjct: 98 EEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK 157
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDL 354
+ +T+ ISR++ + R +++A+ F M + +K D + +L ++S S N D
Sbjct: 158 KL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDA 216
Query: 355 GLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
VF K + S ++ +G + L L R DE + MK+ GFEPD + Y
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL-RVDEVNR---EMKDEGFEPDVVAYGI 272
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I CKA ++E+A +EME+ C P + LI G + +++ AL F +
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK----------------VRLR------ 511
+ +A + L+ + +R+ AYK + EM K +R++
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 512 ---------PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
P +T++ ++ RL+ A+ + MK + P F I+
Sbjct: 393 EVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 560 GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+++A E+ + L V P + ++ ++ +EGR + DL+ K
Sbjct: 453 NKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVK 499
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 212/511 (41%), Gaps = 52/511 (10%)
Query: 43 ASNQSHTSQFHINTCQKIFFSTSPNSSLELI--LACDWSD-ELENKLEELSPKLTHESVV 99
ASN + FH ++ + + + E I + ++D ++E L E S KL+ +
Sbjct: 39 ASNFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIE 98
Query: 100 YVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDH 159
VL+KL N A + F W ++K F+ +++ Y+ ++ +L K W + MK
Sbjct: 99 EVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK 158
Query: 160 CYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI 219
+ +ET+ I +A+K + A+ FH
Sbjct: 159 -LLSKETFALISRRYARARKVKE--AIGAFH----------------------------- 186
Query: 220 GKKLED--MKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
K+E+ K+E SD N +L L + R F + + ++ + +Y +L
Sbjct: 187 --KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM--KKKRFEPDIKSYTILLEGW 242
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ ++ V EMK EG+E D+ Y I K + E+A++ F M KPS
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
L+ + S + L F + +S G L Y+ + A R ++A K +
Sbjct: 303 HIFCSLINGLGSEKKLNDALEF--FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M+ G P+ TY ++ L + R ++A V M C P + T+ I+++ C
Sbjct: 361 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 417
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+D A+ + +M K + LI + +++ A + EM++ V +RP
Sbjct: 418 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD-VGIRPPGHM 476
Query: 517 FKTLIEKLLGARRLEEAMNLL----RLMKKQ 543
F L + LL R ++ +L+ RL K Q
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQ 507
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 162/332 (48%), Gaps = 6/332 (1%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
D + + L+ +S++ V+ VLK V A GFF W + + Y H+ YN ++ +L
Sbjct: 162 DHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDIL 221
Query: 277 ARHESVRDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
+ + W +V+EMK+ EGY + +DT K+ R+F K + EDAV+ F M G Y
Sbjct: 222 GKAKEFDLMWKLVKEMKRIEGY-VCLDTMSKVMRRFAKAQRHEDAVEAFRGM--GKYGVE 278
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+L + + + + V ++++S LS ++ + K+ F++A K+
Sbjct: 279 KDTAALNKLLDALVKGQSIEIAHNVLDEFKS-SVPLSSPSFNILINGWCKVRNFEKARKV 337
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M+ K GFEPD TY+ I C F VL+EM NGC P+ T+TIL+ G+
Sbjct: 338 MEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGK 397
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A ++ +AL + +M + D L+ R+ A ++ +M ++ +R
Sbjct: 398 AGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRD-VV 456
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ T+I + E A+ LL+ M++ + P
Sbjct: 457 TYNTMISTACAHSKEETALRLLKEMEETSCKP 488
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/455 (23%), Positives = 179/455 (39%), Gaps = 48/455 (10%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVT 151
++++ V+ VL++ ND A FF W + + S VY+LM+ L W
Sbjct: 174 RVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMWKL 233
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK-EIAMDNVA-KTLVDV 209
++ MK Y+ +T ++ KA++ D A+ F GM K + D A L+D
Sbjct: 234 VKEMKRIEGYVCLDTMSKVMRRFAKAQRHED--AVEAFR-GMGKYGVEKDTAALNKLLDA 290
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR-IYPVKALGFFRWVGEHSGYKHNTIT 268
+ ++ IE++ N VL E + P+ + F I
Sbjct: 291 L------------VKGQSIEIAHN----VLDEFKSSVPLSSPSF-------------NIL 321
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
NG +V E R V+EE K+ G+E D+ TY + + ++ E M
Sbjct: 322 INGWCKV-RNFEKAR---KVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMR 377
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTK 385
P+ ++LL G + + +YE + G Y + L K
Sbjct: 378 GNGCPPNAVTYTILLLGYGKA-----GQLSKALEEYERMKKDGIVPDTPFYSSLMYILGK 432
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +A ++ M G D +TY+ +I C + E A +L EMEE C PD++T
Sbjct: 433 AGRLKDACEVFDDMPKQGVVRDVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQT 492
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ L++ C + M + + D +L+ + ++ A EM+
Sbjct: 493 YHPLLKMCCKKKRMKVLKFLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMV 552
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
K P + T K L KL L+E + LM
Sbjct: 553 SK-GFTPMETTVKLLTRKLEIKSMLKEKDQIEELM 586
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 7/336 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N I+YN ++ L R +++ V+ EM + GY +D TY + + + K A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ PSV + L+ S+ N + + F ++ G ++ Y +
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF--LDQMRVRGLCPNERTYTTLV 387
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
++ G +EA ++++ M + GF P +TY+ +I G C G+ EDA VL++M+E G
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ +++ ++ G C + +VD AL +M+EK D LI GF Q+R A L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM+ +V L P + T+ LI LE+A+ L M ++ P + I+
Sbjct: 508 YEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 561 ----TVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
T E LK + PS Y + E+ N
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 216/553 (39%), Gaps = 72/553 (13%)
Query: 62 FSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCD 121
F++SP+ SL A + +L LS T E+ +L K ND F NW
Sbjct: 15 FASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANP 74
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+ F +L+ +TL IL K K A
Sbjct: 75 HQFF------------------TLRCKCITLH----------------ILTKFKLYKTAQ 100
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE---DMKIELSDNFVLTV 238
LA D AKTL D ++ + K L+ D+ S F L V
Sbjct: 101 ILAE--------------DVAAKTLDD-----EYASLVFKSLQETYDLCYSTSSVFDLVV 141
Query: 239 LKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW-NVVEEMKKEG 296
R+ + KAL H G+ ++YN +L R + F NV +EM +
Sbjct: 142 KSYSRLSLIDKALSIVHLAQAH-GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
++ TY + R F ++ A+ LF+ M P+V + L+ + D G
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG- 259
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
F++ G + Y+ + L + GR E ++ M G+ D +TY+ +I
Sbjct: 260 -FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK G F A + EM +G P + T+T LI C A ++RA+ +M +
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ L++GF + +N AY++L EM + P T+ LI ++E+A+ +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFES 589
L MK++ P + +S F D E AL VK P + Y + +
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE---ALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 590 FFNEGRHYEAKDL 602
F + R EA DL
Sbjct: 495 FCEQRRTKEACDL 507
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + +TYN ++ + D V+E+MK++G D+ +Y + F + +++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A+++ M++ KP S L++ + YE + G + Y
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK-----EACDLYEEMLRVGLPPDEFTY 523
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ A G ++A ++ M G PD +TYS +I GL K R +A +L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 437 NGCIP---------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+P + K+ LI+G C + A F M+ KN+ D
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIE 506
+++I+G + AY L EM++
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 121/302 (40%), Gaps = 18/302 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ++Y+ +L R V + V EM ++G + D TY + + F + R ++A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+E M+ P + L+ + DL ++ N+ G Y +
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCM--EGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYS---------------QVIFGLCKAGRFE 425
L K R EA++++ + P ++TY +I G C G
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V + M PD + I+I GHC A ++ +A + +M++ + + L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ +VN ++V ++ L + K L+E ++ +++L M K +
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 546 PP 547
P
Sbjct: 742 LP 743
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 177/388 (45%), Gaps = 13/388 (3%)
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
V+ S + +I L+ + + +S V VL+ L + AL FFRW G+++ ++
Sbjct: 105 VVSSQPEPRIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESF 164
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
+ ++ L + + R W++VE M+ G + DT+ I R++ + R +++AV+ FE M
Sbjct: 165 HNLIEALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVETFEKMSS 223
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
K + D + L+ +S V + ++ + + + V D + G
Sbjct: 224 FGLKADLSDYNWLIDVLSKSKQ-----VKKAHAIFKEMKRN-GRFVPDLKTYTVLMEGWG 277
Query: 390 DEAEKMM-----KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
E + +M + M +AG +PD + Y +I CK+G+ ++A V EME NGC+P
Sbjct: 278 HEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPH 337
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ +LI G + +D AL F + + + ++ + + A+K++ EM
Sbjct: 338 VYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKMVDEM 397
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
K + P T+ +++ L+ ++++EEA N+ + M + P + + F + E
Sbjct: 398 -RKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCSNER 456
Query: 565 ASEFLKALSVKEYPSSAAYLQVFESFFN 592
LK + + +F S N
Sbjct: 457 VDMALKVWKQMKEKGVLPCMHMFSSLIN 484
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 195/468 (41%), Gaps = 37/468 (7%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+ + L+ L ++ E V VLR L N A AFF W ++ FR ++ + ++ L
Sbjct: 114 IASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQGFRYTAESFHNLIEALGK 173
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ W + M+ + ++T+ I+ +A+K + A+ F M +
Sbjct: 174 IKQFRLVWSLVEAMR-CRGLLSKDTFRLIVRRYARARKVKE--AVETFEK-------MSS 223
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHS 260
+K +LSD N+++ VL + + KA F+ + +
Sbjct: 224 FG----------------------LKADLSDYNWLIDVLSKSKQVK-KAHAIFKEMKRNG 260
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+ + TY ++ + + +V +EM G + D+ Y + F K ++A
Sbjct: 261 RFVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEA 320
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+F M PS +L+ + S D L + +K + G + + +
Sbjct: 321 IKVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSK--ASGFPMEVPTCNAVV 378
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A + +F A KM+ M+ G P+ TY ++ L K+ + E+A NV M GC
Sbjct: 379 GAYCRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCE 438
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+T+++ C+ VD AL + +M EK + LING + R+ A
Sbjct: 439 PQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVY 498
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
EM++K +RP F L E L+ R+ A ++ + PF
Sbjct: 499 FQEMLDK-GIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKTPF 545
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 173/378 (45%), Gaps = 14/378 (3%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY + R
Sbjct: 96 AEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGR 152
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ L + M+ +PSV ++LL ++ + G +V ++ + G + + Y
Sbjct: 153 VGDALSLLDDMLRRECQPSVVTYTVLLEAVC--KSSGFGQAMKVLDEMRAKGCTPNIVTY 210
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + R D+A +++ + + GF+PD ++Y+ V+ GLC A R+ED + EM E
Sbjct: 211 NVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVE 270
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N C+P+ T+ +L++ C V+RA+ +M E A+ L +++IN Q RV+
Sbjct: 271 NNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDD 330
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++ L M P ++ T+++ L A R E+A LL M ++N PP F +I
Sbjct: 331 AFEFLNNM-GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFI 389
Query: 557 SKF---GTVEDASEFLKALSVKEYPSSAA---YLQVFESFFNEGRHYEAKDLLYKCPHHI 610
G ++ A ++ + EY S Y + F +GR A +L P
Sbjct: 390 CILCQKGLIDQAILLIEQM--PEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEP 447
Query: 611 RQDSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 448 NTITYTTLLTGLCHAERL 465
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 201/498 (40%), Gaps = 31/498 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+++ +PS Y+++L + Q L M+ C TY I+ + + +
Sbjct: 165 RRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVD 224
Query: 182 DL-AALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDN----- 233
D LN+ + D V+ T V + W+D +E + E+ +N
Sbjct: 225 DARQILNRLSSYGFQP---DTVSYTTVLKGLCAAKRWED-----VEVLFCEMVENNCVPN 276
Query: 234 ---FVLTVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
F + V R V +A+ + EH G NT N ++ + + V D + +
Sbjct: 277 EVTFDMLVRFFCRGGMVERAIEVLDRMSEH-GCTANTTLCNIVINSICKQGRVDDAFEFL 335
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
M G D +Y + + + EDA +L M+ P+ + + +
Sbjct: 336 NNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQK 395
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
D ++ + G S+ Y+ + GR D A ++ ++ EP+ I
Sbjct: 396 GLIDQAILL--IEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPNTI 450
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ ++ GLC A R + A +L EM +N C ++ T+ +L+ C V+ A+ +M
Sbjct: 451 TYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQM 510
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
ME + + L++G A +LL ++ K + T+ ++++ L R
Sbjct: 511 MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSK-GISLDTITYSSIVDVLSREDR 569
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL-SVKEYPSSAAYLQ 585
+EEA+ + ++ P + + +S K + A +F + S P+ + Y+
Sbjct: 570 IEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVI 629
Query: 586 VFESFFNEGRHYEAKDLL 603
+ E EG EA+ +L
Sbjct: 630 LIEGLAREGLLKEARYVL 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 122/291 (41%), Gaps = 37/291 (12%)
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
I DL R+ + S G + + + R L + GR +A ++++ + +G D
Sbjct: 46 IARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDV 105
Query: 409 ITYSQVIFGLCKAGRFE--------------------------------DACNVLDEMEE 436
Y+ ++ G C+ GR + DA ++LD+M
Sbjct: 106 FAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C P + T+T+L++ C ++ +A+ +M K + +V+ING + RV+
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A ++L + +P ++ T+++ L A+R E+ L M + N P F V
Sbjct: 226 ARQIL-NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLV 284
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAAYLQ-VFESFFNEGRHYEAKDLL 603
++ + G VE A E L +S ++ V S +GR +A + L
Sbjct: 285 RFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFL 335
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 9/218 (4%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA ++++ + G PD +++I LC+ GR DA VL E +G D+ + L+
Sbjct: 53 EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G+C +D A A M DA LI G + RV A LL +M+ +
Sbjct: 113 AGYCRYGRLDAARRLIASM---PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRR-EC 168
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
+P T+ L+E + + +AM +L M+ + P + + + + V+DA +
Sbjct: 169 QPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQ 228
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY 604
L LS + P + +Y V + + +E ++L+
Sbjct: 229 ILNRLSSYGFQPDTVSYTTVLKGLC-AAKRWEDVEVLF 265
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NTITY +L L E + ++ EM + +++ T+ + F + +E+A++L
Sbjct: 448 NTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELV 507
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ MM+ P++ + F ++ DGI T
Sbjct: 508 QQMMEHGCTPNL-------------------ITF--------------NTLLDGI----T 530
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ +EA +++ + + G D ITYS ++ L + R E+A + +++ G P
Sbjct: 531 EDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAV 590
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ++ C E DRA+ FA M+ + + +LI G + + A +L E+
Sbjct: 591 MYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSEL 650
Query: 505 IEK 507
+
Sbjct: 651 CSR 653
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 163/327 (49%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H++ TYN ++ +LA+
Sbjct: 152 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF 211
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 212 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 270
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 271 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 326 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 444
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + + E A + M + P
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEP 471
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 183/452 (40%), Gaps = 46/452 (10%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 125 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F S Y+ M+ L + L M + ET+ +
Sbjct: 182 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 240
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 241 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 295
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
++ T+ NG RV E+ R WN +M +
Sbjct: 296 PNMMT------------------------YTVLLNGWCRVRNLIEAAR-IWN---DMIDQ 327
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + DI + + + R DA+KLF M P+V+ ++++R ++ +
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ + + G +VY + + D +++K M+ G PD TY+ +I
Sbjct: 388 IEY--FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ E A + ++M +N P I T+ ++++ + A + + +M++K
Sbjct: 446 KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
D + VLI G + + + A + L EM++K
Sbjct: 506 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
Length = 484
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 165/347 (47%), Gaps = 20/347 (5%)
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K+EGY D+ Y ++ + R +AV+ F+ + +PS+ +++++ ++ NP
Sbjct: 36 KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA----EKMMKAMKNAGFEPDN 408
G +R SLG + Y+ + + LGR A KM K K P+
Sbjct: 96 --GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKTCK-----PNV 148
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TY+ VI GLCK G+ + A ++ + + PD T++ L+ G C A ++ A+ +
Sbjct: 149 ATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDM 208
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+E NYD DA + + +GF ++RV+ A ++L MI++ R +P T+ +I + +
Sbjct: 209 MLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQR-RCKPSVVTYNCIINGVCQYK 267
Query: 529 -RLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAY 583
R+EEA L + M + PP + I SK V+ E K +S P AY
Sbjct: 268 NRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAY 327
Query: 584 LQVFESFFNEGRHYEAKDLLYKCP-HHIRQDSKI--SLLFGSAKSNK 627
+ +F + EAK +L +H+ D + +L+ G ++ K
Sbjct: 328 HSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 91/458 (19%), Positives = 176/458 (38%), Gaps = 73/458 (15%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI- 170
A FF+W ++ +R Y+ +L +LV ++ +R HC ++ I
Sbjct: 27 ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86
Query: 171 ---------------LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDW 215
LG ++ D+ A N G + V + L+
Sbjct: 87 QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCD---LGRVGRALI-------- 135
Query: 216 DDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
K GK + K ++ N V+ L + F R H + TY+ ++
Sbjct: 136 --KFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRL--PHDLVDPDGFTYSTLVH 191
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + E + V + M + Y+ D Y ++ F K R +++A+++ + M+ KP
Sbjct: 192 GLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKP 251
Query: 335 SVQDCSLLLRSISSINN------------------PD--------LGL--VFRVANKYES 366
SV + ++ + N P+ LGL ++ V E
Sbjct: 252 SVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLE- 310
Query: 367 LGNSLSKS-------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
L +SK+ Y + A K+ + DEA+ +++ PD Y+ +I G C
Sbjct: 311 LFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYC 370
Query: 420 KA--GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+A R ++A + M++ P++ T+ I+++G C D A F +M + +
Sbjct: 371 RARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPN 430
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
V+ G + ++ + ++ ++M+ K R WQ
Sbjct: 431 RMTFKVMTMGMIHCRKTDKFERIFMDMVYKGR---WQG 465
>gi|255660928|gb|ACU25633.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 481
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 172/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKEGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + +++ GR+ +++ M N G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++++ PD+ T+ +I G+ +++ A F +M EK D LI G+
Sbjct: 171 RFFEDLKSREITPDVVTYNTMINGYTRVKKMEEAEKYFLEMKEKKIDPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
S RV+ A +L+ EM + + ++P T+ TL+ L A ++ EA +LL+ ++ K P
Sbjct: 231 ASIDRVDDALRLVEEM-KGLGIKPNAITYSTLLPGLCDAEKMSEARSLLKEMVDKYIAPK 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ G++ +A L
Sbjct: 290 DNSIFIRLISSQCKAGNLDAAADVLKAMIRLSIPTEAGHYGVLIENYCKAGKYDQAVKLF 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTTKSYDTLFKVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
D+M+ PD+ T+ +I G+ ++D A F +M +N + LI G+
Sbjct: 171 RFFDDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F +H +A LL
Sbjct: 290 DNSIFMRLISGQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 84/395 (21%), Positives = 154/395 (38%), Gaps = 44/395 (11%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
N + L P HE V VL E A FF WV F + + ++ L
Sbjct: 1 NSIRNLVPSFDHELVYNVLHG-SKTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRAS 59
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
L L M + +E+ ++ ++ KA G+V+E
Sbjct: 60 KLNHARCILLDMPKKGLEWDEDMWVLMIDSYGKA--------------GIVQESV----- 100
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELS----DNFVLTVLKELRIYPVKALGFFRWVGEH 259
K+ +K+E++ +E + D +L+ R K F + + E
Sbjct: 101 --------------KLFQKMEELGVERTTKSYDTLFKVILRRGRFMMAKRY-FNKMLSE- 144
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G + T+N ++ V ++MK D+ TY + + + + M++
Sbjct: 145 -GIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREISPDVITYNTMINGYYRVKKMDE 203
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A K F M +P+V + L++ S++ D L R+ + + G + Y +
Sbjct: 204 AEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDAL--RLVEEMKGYGIKPNAITYSTL 261
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEP-DNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L + EA ++K M + P DN + ++I G CK G + A +VL M
Sbjct: 262 LPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQCKTGNLDAAADVLKAMIRLS 321
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ + +LI+ C A++ D+A+ K++EK+
Sbjct: 322 VPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKD 356
>gi|302798519|ref|XP_002981019.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
gi|300151073|gb|EFJ17720.1| hypothetical protein SELMODRAFT_114007 [Selaginella moellendorffii]
Length = 448
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 4/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY ++ VL +H D V + M ++ ++D Y + + R ++ A +LF
Sbjct: 148 DGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVYTSLLAAHCRTRKLDGAYRLF 207
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ Y PS LLLR + N L + + + S G+ ++ Y +
Sbjct: 208 VEMIQRGYGPSASTYGLLLRCLC--NGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCC 265
Query: 385 KLGRFDEAEKMMK-AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
GR EA+ + K ++ + D Y+ +I GLC+A + E+A V M + GCIP +
Sbjct: 266 MAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTL 325
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T+ LI G ANEVD+AL F M EK + + + I+G ++N A++ +
Sbjct: 326 QTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQ 385
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+E+ + P T+ LI L GA R++EA L R M ++ Y
Sbjct: 386 SVERGCV-PDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G D D+Y + R K ++ A + M+ Y P V C LL+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+G V + + ES G ++ Y+ I +AL G FD K G P + Y
Sbjct: 61 --VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAY 118
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
++ L K G+ +A V+ EM + +PD T+T LI C N D A+ F M+E
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVE 177
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + D+ L+ ++++GAY+L VEMI++ P +T+ L+ L R
Sbjct: 178 KEIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSASTYGLLLRCLCNGGRSY 236
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYI 556
A ++ M+ + + P + I
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLI 261
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 172/406 (42%), Gaps = 50/406 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+YN ++R L + SV ++ M EGY+ D+ T + +F + + + + +LF+ +
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFR-VANKYESLGNSLSKSVYDGIHRALTKL 386
+ + +L+++ + D G F +A SL + L+ Y + L K
Sbjct: 72 ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLA---YKTMLDCLIKT 128
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA +++ M PD +TY+ +I LCK R +DA V D M E +P++ +
Sbjct: 129 GKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNVDVY 187
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADAD----LLDVLINGFLS------------ 490
T L+ HC ++D A F +M+++ Y A LL L NG S
Sbjct: 188 TSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRS 247
Query: 491 -------------------QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
R+ A L E++E + + + LIE L A ++E
Sbjct: 248 RGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKAQLDAGIYNVLIEGLCRASKVE 307
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVF 587
EA+ + M + P + + I F V+ A + +A+ K + P++ Y
Sbjct: 308 EALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFI 367
Query: 588 ESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAKSNK 627
+ G+ EA + + P ++ ++ I LFG+ + ++
Sbjct: 368 DGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 13/226 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + TY +LR L +++ M+ G+ D +TY + + +A
Sbjct: 214 GYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEA 273
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
LF+ +++G + L I ++ L +V E + K
Sbjct: 274 KVLFKEVLEGEK-------AQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQ 326
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + K D+A ++ +AM+ GF P+ + YS I GLCK G+ +A +
Sbjct: 327 TYNALIMGFFKANEVDKALQLFRAMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQS 386
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
E GC+PD T+ LI+G AN +D A + +M E+ Y AD L
Sbjct: 387 VERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSL 432
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
E ++ E ++D Y + + +E+A+++ M+D P++Q + L+
Sbjct: 279 EVLEGEKAQLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKA 338
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N D L +FR E G S + +Y L K+G+ +EA + + G PDN
Sbjct: 339 NEVDKALQLFRA---MEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
+TY+ +I GL A R ++A + EM E G I D T+ Q
Sbjct: 396 VTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRTLAFQ 438
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 44/273 (16%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC---- 454
M G PD +Y+ ++ GL K + A +L M G PD+ T +L+ C
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 455 -----------AANEVDRALLCF-----AKMMEKNYD----------ADADLLDVL---- 484
+N V +L + A M ++D D L VL
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 485 -INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
++ + + A +++ EMI+K P T+ LI L R ++AM + +M ++
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS--VPDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + + ++ + ++ A + + Y PS++ Y + N GR Y A
Sbjct: 179 EIVPNVDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLA 238
Query: 600 KDL---LYKCPHHIRQDSKISLLFGSAKSNKVT 629
D+ + H +++ SL++G + ++T
Sbjct: 239 YDIHSSMRSRGHVPDENTYASLIYGCCMAGRIT 271
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 180/397 (45%), Gaps = 19/397 (4%)
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
+ F DG + M AK + +V + + KI L+ + + +S V VLK L
Sbjct: 85 DAFGDG--PPVGMSEAAKMVCRIV-STQPEPKIASTLDALGVAVSPELVAEVLKNLSNAG 141
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ AL FFRW G+ + ++ ++ L + + R W++VE M+ G + DT+
Sbjct: 142 MLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCRGL-LSKDTFKL 200
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
I R++ + R +++AV+ FE M K + D + L+ ++S V + Y+
Sbjct: 201 IVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQ-----VKKAQAIYKE 255
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMM-----KAMKNAGFEPDNITYSQVIFGLCKA 421
+ K V D + G E + +M + M +AG PD + Y +I CK+
Sbjct: 256 MKRK-GKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKS 314
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G+ ++A V EME +GC+P + +LI G + +D AL F + + +
Sbjct: 315 GKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTC 374
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ ++ + + A+K++ EM K ++ P T+ ++ L+ +++ EEA N+ + M
Sbjct: 375 NAVVGAYCRASKFQHAFKMVDEM-RKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMG 433
Query: 542 KQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
P + + F G V+ A + K + K
Sbjct: 434 IDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEK 470
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 196/477 (41%), Gaps = 37/477 (7%)
Query: 73 ILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVY 132
I++ ++ + L+ L ++ E V VL+ L N A AFF W ++ F ++ +
Sbjct: 105 IVSTQPEPKIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGF 164
Query: 133 SLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDG 192
++ L + W + M+ + ++T+ I+ +A+K
Sbjct: 165 HNLIEALGKIKQFRLVWSLVETMR-CRGLLSKDTFKLIVRRYARARK------------- 210
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALG 251
VKE A++ K + +K ELSD N+++ L + + KA
Sbjct: 211 -VKE-AVETFEKM----------------SIFGLKTELSDYNWLIDTLSKSKQVK-KAQA 251
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
++ + + + TY ++ + + + +EM G D+ Y + F
Sbjct: 252 IYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAF 311
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ++A+K+F M PS +L+ + S D L + Y+ G +
Sbjct: 312 CKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEAL--KYFEHYKKSGFPM 369
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + A + +F A KM+ M+ P++ TY ++ L K+ +FE+A N+
Sbjct: 370 EVPTCNAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIF 429
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M +GC P + T+T+++ C+ VD AL + +M EK + LING +
Sbjct: 430 QRMGIDGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFE 489
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
R+ A EM++K +RP F L E L+ R+ A + + PF
Sbjct: 490 NRLEEACVYFQEMLDK-GIRPPGQLFSNLKEALVQGGRISLAQEVALKLDAIRKTPF 545
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/485 (24%), Positives = 212/485 (43%), Gaps = 43/485 (8%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++ L N + ++M+++ C TY +I+ L K + +D A+
Sbjct: 196 PDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND--AM 253
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
+ + + + I D A T +V G L L +L
Sbjct: 254 DFLSEMVGRGIPPD--AITYNSIVHG-----------------------LCCLGQLN--- 285
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+A F+ + E +G K + +TYN I+ L + V D + + EM +G D+ TY
Sbjct: 286 -EATRLFKRM-EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS--INNPDLGLVFRVANKY 364
I + +A++LF+ M KP V + ++ S+ + N + + + ++
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR- 402
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G + Y I LG+ DEA ++ K M P+ +T+S ++ GLC+ G
Sbjct: 403 ---GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMV 459
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A V + M E G P+I T+ L+ G+C +++ A F M+ K D ++L
Sbjct: 460 SEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
ING+ + +R++ A LL +M K +L P T+ T+++ L RL +A L + M
Sbjct: 520 INGYCNSRRMDKAKALLTQMSVK-KLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSG 578
Query: 545 YPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
P + + + K G +++A + K++ K+ P Y + E F G+ AK
Sbjct: 579 MLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAK 638
Query: 601 DLLYK 605
L K
Sbjct: 639 GLFSK 643
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 146/320 (45%), Gaps = 10/320 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + IT+ ++ + ++ + EM + G+E D+ +Y + A
Sbjct: 158 GIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISS--INNPDLGLVFRVANKYESLGNSLSKSVYDG 378
V +F+ M KP+V + ++ S+ + N + + + + G Y+
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGR----GIPPDAITYNS 273
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L LG+ +EA ++ K M+ G +PD +TY+ +I L K DA + L EM + G
Sbjct: 274 IVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQG 333
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+ T+T ++ G C +++ A+ F KM +K D + +I+ + VN A
Sbjct: 334 IPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAM 393
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+ L EM+++ + P T+ T++ +L+EA L + M +N P F V
Sbjct: 394 EFLSEMVDR-GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDG 452
Query: 556 ISKFGTVEDASEFLKALSVK 575
+ + G V +A + ++ K
Sbjct: 453 LCQEGMVSEARWVFETMTEK 472
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 113/236 (47%), Gaps = 2/236 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+T++ ++ L + V + V E M ++G E +I TY + + M +A K+F
Sbjct: 442 NTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVF 501
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M+ P + ++L+ + D + L + + Y+ I + L
Sbjct: 502 EIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL--TPNTVTYNTIMKGLC 559
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+GR +A+++ K M ++G P +TYS ++ GLCK G ++A + M+E PDI
Sbjct: 560 YVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDII 619
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+TILI+G +++ A F+K+ +V+I G L + + AY+L
Sbjct: 620 LYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYEL 675
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 7/293 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ F M +PS+ + L SI+ + V + N+ + G + +
Sbjct: 74 VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMK--QYSTVVYLCNQMDLFGVTHTVYSL 131
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L +L D A + M G +PD IT++ +I G+C G+ + A + +EM
Sbjct: 132 NILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVR 191
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+G PD+ ++ LI G C + + A+ F KM + + + +I+ + VN
Sbjct: 192 SGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVND 251
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A L EM+ + + P T+ +++ L +L EA L + M++ P + +
Sbjct: 252 AMDFLSEMVGR-GIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIII 310
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLLYK 605
+ K V DA++FL + + P Y + G+ EA L K
Sbjct: 311 DSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 97/226 (42%), Gaps = 9/226 (3%)
Query: 254 RWVGE---HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
RWV E G + N TYN ++ + + V E M +G D+ +Y +
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGN 369
+ R M+ A L M P+ + +++ + + D +F+ K S G
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFK---KMCSSGM 579
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ Y + L K G DEA K+ K+MK EPD I Y+ +I G+ G+ E A
Sbjct: 580 LPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKG 639
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA--KMMEKN 473
+ ++ +G P +T+ ++I+G D A F KMM+ N
Sbjct: 640 LFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWKMMKHN 685
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 4/300 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A R +G G + N +TYN ++ L R + + V+ EM ++G+ D TY +
Sbjct: 256 EAFKLLRSMGLE-GLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTL 314
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K A+ L M+ P V + L+ ++ N + + F ++
Sbjct: 315 VNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEF--FDQMHVR 372
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y + ++ G DEA ++ M +GF P +TY+ ++ G C +GR E+A
Sbjct: 373 GLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEA 432
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L ME G PD+ +++ +I G C E+DRA A+M+EK DA LI G
Sbjct: 433 IGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q+R+N A L EM+ K L P + T+ +LI L EA+NL M K+ + P
Sbjct: 493 LCEQRRLNEACDLFQEMLNK-SLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLP 551
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 143/311 (45%), Gaps = 12/311 (3%)
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRM-MEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
N+V+ K G+ + +Y I + R + A K++ M+ +V ++L+R
Sbjct: 153 NIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRG 212
Query: 346 ISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ N ++GL F + L N ++ Y+ + A KL R DEA K++++M G
Sbjct: 213 FCAAGNLEMGLRFFEEMERNRCLPNVVT---YNTVIGAYCKLKRIDEAFKLLRSMGLEGL 269
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
EP+ +TY+ VI GLC+ GR E+ VL EM+ G PD T+ L+ G+C +AL+
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEK 523
++M+ D LIN +N A + +M VR LRP T+ +LI
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM--HVRGLRPNGVTYTSLING 387
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PS 579
++EA + M + +PP + ++ G +E+A L+ + K P
Sbjct: 388 FSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPD 447
Query: 580 SAAYLQVFESF 590
+Y + F
Sbjct: 448 VVSYSTIIAGF 458
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 11/267 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +TY ++ + + ++ ++M G + TY + F + M++
Sbjct: 337 NGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDE 396
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRS--ISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
A ++++ M+ + P++ + LL +S +GL+ + G LS V
Sbjct: 397 AYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME------GKGLSPDVVS 450
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I + D A +M M G PD ITYS +I GLC+ R +AC++ EM
Sbjct: 451 YSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEML 510
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+PD T+T LI G+C +++ AL +M++K + D +VLING Q R
Sbjct: 511 NKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTR 570
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIE 522
A +LL+++ + P T+ TLIE
Sbjct: 571 EAKRLLLKLFYDESI-PNGITYDTLIE 596
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 153/391 (39%), Gaps = 62/391 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FF + G + N +TY ++ ++ + + + + +EM + G+ I TY +
Sbjct: 361 RAMEFFDQM-HVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
ME+A+ L M P V S ++ +L F++ +
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ--ELDRAFQMNAEMVEK 477
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y + + L + R +EA + + M N PD TY+ +I G CK G +A
Sbjct: 478 GVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEA 537
Query: 428 CNVLDEMEENGCIPDIKTWTIL-------------------------------------- 449
N+ DEM + G +PD T+ +L
Sbjct: 538 LNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIES 597
Query: 450 ------------IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
I+G C ++ A F M+++N + + +V+I+G V+ A
Sbjct: 598 CSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKA 657
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-----LRLMKKQNYPPFPEPF 552
+KL EM++ P T L+ K L + ++E +NL LR K + +
Sbjct: 658 HKLYKEMVD-FGFIPHTVTIIALV-KALYSEGMDEQLNLVIRDILRSCKLSD-AELSKAL 714
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAA 582
VQ K G ++ L ++ + PS AA
Sbjct: 715 VQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 102/268 (38%), Gaps = 41/268 (15%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV----------------- 414
S +V+D + ++ + L ++A ++ K GF P ++Y+ +
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190
Query: 415 -------------------IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
I G C AG E +EME N C+P++ T+ +I +C
Sbjct: 191 YREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK 250
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+D A M + + + +++ING R+ +L EM ++ P
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM-DRKGFAPDGV 309
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
T+ TL+ +A+ L M + PP + I+ K G + A EF +
Sbjct: 310 TYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQM 369
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEA 599
V+ P+ Y + F +G EA
Sbjct: 370 HVRGLRPNGVTYTSLINGFSQKGFMDEA 397
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 122/463 (26%), Positives = 192/463 (41%), Gaps = 49/463 (10%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
+ L P T + ++ LR+ D A FNW + F PSS+VY +LR L S
Sbjct: 55 VHHLPPDFTPKQLIETLRR-QTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSF 113
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK- 204
+ L MK C + +L I +++ K
Sbjct: 114 EYMRRVLEEMKLSGCEFDRGIFL----------------------------IFVESYGKF 145
Query: 205 TLVDVVLGSDWDDKIGKKLED-MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY- 262
L D V+G I K +ED +I+ F +L L V A HS
Sbjct: 146 ELYDEVVG------IVKVMEDEYRIKPDTRFYNVLLNVL----VDANKLKLVESAHSSMV 195
Query: 263 ----KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+H+ T+N +++ L + VR ++EEM G D T+ I + + + ++
Sbjct: 196 RRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLD 255
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+++ E M++ + ++L+ D L F + S G + Y+
Sbjct: 256 GALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSF--IQEAVSEGFRPDQFTYNT 313
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K+G A +++ AM G +PD TY+ +I GLCK G E+A +LD+M
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P+ T+ +I C N VD A + K D + LI G A
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
L EM K RP + T+ LI+ L +R+LEEA+NLL+ M+
Sbjct: 434 DLFEEMKGK-GCRPDEFTYNMLIDSLCSSRKLEEALNLLKEME 475
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 159/347 (45%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + TYN ++ L + + VV+ M G + DI TY + K +E+A
Sbjct: 303 GFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEA 362
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
VK+ + M+ P+ + ++ S+ N D +A S G ++ +
Sbjct: 363 VKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT--EIARLLTSKGILPDVCTFNSLI 420
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L A + + MK G PD TY+ +I LC + + E+A N+L EME NGC
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCA 480
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ + LI G C ++ A F +M + D+ + LI+G KRV A +L
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS--- 557
+ +MI + LRP + T+ +L+ +++A ++++ M P + IS
Sbjct: 541 MDQMIME-GLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLC 599
Query: 558 KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLL 603
K G V+ AS L+++ +K + AY V ++ F R +EA L
Sbjct: 600 KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLF 646
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 159/369 (43%), Gaps = 22/369 (5%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL F W + + ++ Y ILR L + S V+EEMK G E D ++
Sbjct: 78 VAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLI 137
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ KF + ++ V + + M D KP + ++LL + N L LV E
Sbjct: 138 FVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANK--LKLV-------E 188
Query: 366 SLGNSLSK-------SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
S +S+ + S ++ + +AL K + A MM+ M + G PD T++ ++ G
Sbjct: 189 SAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGY 248
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+ G + A + ++M E GC T +LI G C +D+AL + + + + D
Sbjct: 249 IEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQ 308
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ L+NG A +++ M+ L P T+ +LI L +EEA+ +L
Sbjct: 309 FTYNTLVNGLCKIGHAKHAMEVVDAMLLG-GLDPDIYTYNSLISGLCKLGEIEEAVKILD 367
Query: 539 LMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
M ++ P + IS K V++A+E + L+ K P + + +
Sbjct: 368 QMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSS 427
Query: 595 RHYEAKDLL 603
H A DL
Sbjct: 428 NHKSAMDLF 436
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 129/291 (44%), Gaps = 7/291 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+N +++ L + + ++ EEMK +G D TY + R +E+A
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ L + M ++G + V +L+ N + + ++ E G S Y+ +
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLI---DGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTL 524
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K R ++A ++M M G PD TY+ ++ CK G + A +++ M +GC
Sbjct: 525 IDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGC 584
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T+ LI G C A V A + K + +I + R + A +
Sbjct: 585 NPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMR 644
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNL-LRLMKKQNYPPF 548
L EM++K P T+K + L G + EA++ + ++++ N P F
Sbjct: 645 LFREMLDKSE-PPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEF 694
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 41/269 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N + YN ++ +++ + + + +EM+ +G D TY + K + +
Sbjct: 475 ELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRV 534
Query: 318 EDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
EDA +L + M M+G LR PD K Y
Sbjct: 535 EDAAQLMDQMIMEG------------LR-------PD-------------------KFTY 556
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K G +A +++ M ++G PD +TY+ +I GLCKAGR + A +L ++
Sbjct: 557 NSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQM 616
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + +IQ N A+ F +M++K+ DA ++ G + G
Sbjct: 617 KGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIG 676
Query: 497 -AYKLLVEMIEKVRLRPWQATFKTLIEKL 524
A VEMIE+ + P ++F L E L
Sbjct: 677 EAVDFTVEMIERGNI-PEFSSFVMLAEGL 704
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 173/375 (46%), Gaps = 22/375 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
T+ +N ++ L R +R V +M + + D TY K+ K R + DAV++
Sbjct: 4 GTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQVL 62
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M+ + P +++++S+ + D LV + ++ G + + Y +
Sbjct: 63 QEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHR----GMAANAITYSALVDG 118
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K R DEA +++ M G P +TY+ +I G C+A R ++A +++M GC PD
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
I T+T LI G C + +V R L ++ + + D +I+G R+ A V
Sbjct: 179 IITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA----V 234
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
++ E++ P T+ +LI A ++EA+ LL M P + +S F
Sbjct: 235 DIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKM 294
Query: 560 GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-----CPHHIRQD 613
G ++DA E F + ++ K P + + + EGR +A +LL + CP I
Sbjct: 295 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIY-- 352
Query: 614 SKISLLFGSAKSNKV 628
+ ++ G K+N+V
Sbjct: 353 TYNCVVDGYCKANQV 367
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 198/477 (41%), Gaps = 78/477 (16%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + ++++++ L L+ R+M + H + TY ++ L KA++ D A+
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRD--AV 59
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
+ + DN T+V L +G +++D + EL + +
Sbjct: 60 QVLQEMVSARHVPDNTTLTVVVQSL------CLGDRVDDAR-ELVEEML----------- 101
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
H G N ITY+ ++ L + E + + +VE M + G + TY
Sbjct: 102 ------------HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNS 149
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
I F + R +++A E M ++ +PD+ Y +
Sbjct: 150 IITGFCRARRVDEAHGFMEQM------------------VAEGCHPDI-------ITYTA 184
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
L KS + R L LG + GF PD +TYS VI GLCKAGR D
Sbjct: 185 LIGGFCKS--RDVGRGLELLGE----------VTRRGFTPDIVTYSTVIDGLCKAGRLRD 232
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +EM C P T+ LI G+C A ++D A+ KM++ D L++
Sbjct: 233 AVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMS 289
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F R++ AY+L +M+ +L P TF +L++ L G R+E+A+ LL + ++ P
Sbjct: 290 AFCKMGRLDDAYELFQQMVAN-KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCP 348
Query: 547 PFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + V K V A E + + + P++ Y + GR +A
Sbjct: 349 PTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 155/375 (41%), Gaps = 49/375 (13%)
Query: 248 KALGFF-RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+A GF + V E G + ITY ++ + V ++ E+ + G+ DI TY
Sbjct: 162 EAHGFMEQMVAE--GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K + DAV +FE M P + SL+ D+ R+ K
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMSCAPTAITYN--SLIG---GYCRAGDMDEAIRLLGKMVD 274
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ Y + A K+GR D+A ++ + M PD +T++ ++ GLC GR ED
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L+E+ GC P I T+ ++ G+C AN+V +A A + + + ++L+
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394
Query: 487 G------------FLSQ-------------------------KRVNGAYKLLVEMIEKVR 509
G +L Q R + A + EMI++
Sbjct: 395 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGY 454
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDAS 566
+ P ATF T++ L A + ++A LL M K + P P + V + G ++ A
Sbjct: 455 V-PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKAD 513
Query: 567 EFLKALSVKEYPSSA 581
E L + SS+
Sbjct: 514 ELASELRLYTDKSSS 528
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 158/336 (47%), Gaps = 7/336 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N I+YN ++ L R +++ V+ EM K GY +D TY + + + K A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ PSV + L+ S+ N + F ++ G ++ Y +
Sbjct: 330 LVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF--LDQMRVRGLCPNERTYTTLV 387
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
++ G +EA +++K M + GF P +TY+ +I G C AG+ DA VL++M+E G
Sbjct: 388 DGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLT 447
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ +++ ++ G C + +VD AL KM+ K D LI GF Q+R A L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM+ +V L P + T+ LI L++A+ L M ++ P + + ++
Sbjct: 508 FDEML-RVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 558 KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFN 592
K +A L L +E PS Y + E+ N
Sbjct: 567 KQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 143/327 (43%), Gaps = 42/327 (12%)
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
R + A +F+ M+ P+V ++L+R N D+ L R ++ E G +
Sbjct: 184 RNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVAL--RFFDRMEKKGCLPNVV 241
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + KL + D+ +++++M G EP+ I+Y+ VI GLC+ GR ++ VL EM
Sbjct: 242 TYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEM 301
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK--------------------NY 474
+ G D T+ LI+G+C +AL+ A+M+ N
Sbjct: 302 NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNM 361
Query: 475 DADADLLD---------------VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+ + LD L++GF + +N AY++L EMI+ P T+
Sbjct: 362 NRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDN-GFSPSVVTYNA 420
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL----KALSVK 575
LI A ++ +A+ +L MK++ P + +S F D E L K ++
Sbjct: 421 LINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKG 480
Query: 576 EYPSSAAYLQVFESFFNEGRHYEAKDL 602
P + Y + + F + R EA DL
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDL 507
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 42/296 (14%)
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
++++ D LVFR + L NS S SV+D + ++ ++L D+A ++ + GF P
Sbjct: 110 TLDDEDASLVFRSLQETYDLCNSTS-SVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPG 168
Query: 408 NITYSQV------------------------------------IFGLCKAGRFEDACNVL 431
++Y+ V I G C AG + A
Sbjct: 169 VLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFF 228
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D ME+ GC+P++ T+ LI G+C ++D M K + + +V+ING +
Sbjct: 229 DRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCRE 288
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
R+ +L EM K + T+ TLI+ +A+ + M + P
Sbjct: 289 GRMKEISFVLTEM-NKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVIT 347
Query: 552 FVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I K G + A+EFL + V+ P+ Y + + F +G EA +L
Sbjct: 348 YTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/302 (19%), Positives = 119/302 (39%), Gaps = 18/302 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ++Y+ +L R V + V +M +G + D TY + + F + R ++A
Sbjct: 445 GLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF+ M+ P + L+ + DL ++ N+ G Y +
Sbjct: 505 CDLFDEMLRVGLPPDEFTYTALINAYCM--EGDLQKAIQLHNEMVEKGVLPDVVTYSVLI 562
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYS---------------QVIFGLCKAGRFE 425
L K R EA++++ + P ++TY +I G C G
Sbjct: 563 NGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V + M E PD + ++I GHC ++ +A + +M++ + + L+
Sbjct: 623 EADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALV 682
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ +VN ++ ++ L + K L+E ++ +++L M K +
Sbjct: 683 KTLHKEGKVNELNSVIANVLRSCELSEAEQA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 546 PP 547
P
Sbjct: 742 LP 743
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H++ TYN ++ +LA+
Sbjct: 151 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF 210
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 211 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 269
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 270 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 324
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 325 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 384
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 385 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 443
Query: 521 IEKLLGARRLEE 532
I KL+ +++ E
Sbjct: 444 I-KLMANQKMPE 454
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 183/464 (39%), Gaps = 70/464 (15%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 124 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 180
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F S Y+ M+ L + L M + ET+ +
Sbjct: 181 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 239
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 240 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 294
Query: 236 LTVLKELRIYPVKALGFFR----------W--VGEHSGYKHNTITYNGILRVLARHESVR 283
++ Y V G+ R W + +H G K + + +N +L L R
Sbjct: 295 PNMM----TYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKS 349
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
D + MK +G ++ +Y + R F K ME A++ F+ M+D +P
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA------- 402
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+VY + + D +++K M+ G
Sbjct: 403 ------------------------------AVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TY+ +I + E + ++M +N P I T+ ++++ + A +
Sbjct: 433 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 492
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +M++K D + VLI G +S+ + A + L EM++K
Sbjct: 493 AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 165/369 (44%), Gaps = 16/369 (4%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR G +TYN I+ L + + + EE+ + G+ D+ TY +
Sbjct: 19 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTL 78
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANK-Y 364
K +E+A +L M P+V S+L+ + + D L+ + K
Sbjct: 79 IDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 138
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAG 422
+ L N ++ Y+ L K EA ++M+++++ PD +T+S +I GLCK G
Sbjct: 139 DVLPNIIT---YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 195
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ ++AC+V D+M G +P++ T+ L+ G C A++++RA M++K D
Sbjct: 196 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 255
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKV----RLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
VL++ F RV+ A +LL M + L P + TF LI A E+A L
Sbjct: 256 VLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFE 315
Query: 539 LMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEG 594
M +N P F + + K G VE A + L + + P+ Y + G
Sbjct: 316 EMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSG 375
Query: 595 RHYEAKDLL 603
R EA L
Sbjct: 376 RIEEACQFL 384
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/460 (23%), Positives = 191/460 (41%), Gaps = 55/460 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE--TYLSIL-GVLKKAKKASDL 183
P+ YS+++ L + + ++ M C + TY S L G+ K++ A
Sbjct: 105 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEAC 164
Query: 184 AALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+ DG ++ ++ D V TL+D + D+ +DM
Sbjct: 165 ELMRSLRDGSLR-VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI--------------- 208
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
GY N ITYN ++ L + + + ++E M +G D+
Sbjct: 209 ----------------AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV-----QDCSLLLRSISSINNPDLGLV 357
TY + F K +++A++L M P+V ++L+ N
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGN------ 306
Query: 358 FRVANKY--ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
F A+ E + +L V + + L K G+ + A ++ M N G P+ +TY+
Sbjct: 307 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 366
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ GLCK+GR E+AC L+EM +GC+PD T+ L+ C A+ D AL +++
Sbjct: 367 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 426
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+D D ++L++G + A +L EM+ K +P TF L + L
Sbjct: 427 WDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFSGLHRSGNLAGT 485
Query: 534 MNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
M LLR++ + P + ++ + G ++D +K
Sbjct: 486 MELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIK 525
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 8/168 (4%)
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL-DVLINGFLSQKRVNGAYKLL 501
+ + I++Q C A + RAL F M ++ A + + +ING + +L
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
E++E+ P T+ TLI+ L A LEEA L M + P + + + K
Sbjct: 61 EELVERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119
Query: 559 FGTVEDASEFLKALSVKE---YPSSAAYLQVFESFFNEGRHYEAKDLL 603
G +++A E ++ ++ K P+ Y + + EA +L+
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELM 167
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 155/316 (49%), Gaps = 8/316 (2%)
Query: 255 WVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+VG E SG K N +TYN I+ V ++ MK++ E D TY +
Sbjct: 243 FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC 302
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K +E+A K+FE M+ +PS + L+ + N D+ ++ ++ G S +
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK--DEMLKKGISPT 360
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
S Y+ + AL R DEAE M+K ++ G PD ITY+ +I G C+ + A + D
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM +G P KT+T L+ N + A F K+ + DA + + LI+G S
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNS 480
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
V GA++LL +M +++++ P + TF T+++ ++EEA L MK++ P F
Sbjct: 481 NVKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539
Query: 553 VQYISKF---GTVEDA 565
IS + G ++DA
Sbjct: 540 NTLISGYSRRGDIKDA 555
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 11/294 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
++A + F M + P+++ C+ LL +N + V E + SVY
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA----EMFRLRIKSSVYT 223
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + L K G+ +A+ + M+ +G +P+ +TY+ ++ G C +GR E A +L M+
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
PD T+ LI G C ++ A F +M++K A + + LI+GF ++ ++
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A EM++K + P +T+ +LI L +R +EA +++ ++++ P +
Sbjct: 344 MASAYKDEMLKK-GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 556 ISKFGTVEDASE-FL---KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I+ + +A + FL + L+ P+ Y + + R EA DL K
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + + YN ++ ++ +EM K+G + TY + + ++A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + + + P ++L+ N F + ++ + G +K Y +
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKA--FLLHDEMLASGIKPTKKTYTSLL 438
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+K R EA+ + K + + G PD I ++ +I G C + A +L +M+
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T+ ++QGHC +V+ A F +M + D + LI+G+ + + A+++
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM++ P T+ L++ L + + A LL+ M + P
Sbjct: 559 RNEMLD-TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 2/231 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + ITYN ++ R + + + + +EM G + TY + K M
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A LF+ + P + L+ S N ++ F + + + + ++
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCS--NSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + + G+ +EA ++ MK G +PD+I+++ +I G + G +DA V +EM +
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
G P + T+ L+QG C E D A +M+ K D LI G
Sbjct: 566 GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP------------------------- 406
S V+D + ++ + R DEA + MK G P
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 407 ----------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
T++ +I LCK G+ + A + + ME +G P+I T+ ++ G+C++
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
V+ A M + + D+ LI+G Q R+ A K+ EM++K LRP
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVI 328
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ TLI+ L+ A M K+ P
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 174/360 (48%), Gaps = 43/360 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T++ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLLI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ +PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ A +L+ EM + ++P T+ TL+ L A+++ EA ++L+ M ++ P
Sbjct: 231 VSVDRVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ G++ +A LL
Sbjct: 290 DNSIFLRLISGQCKAGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 133/546 (24%), Positives = 223/546 (40%), Gaps = 71/546 (13%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
+LR L + + + A ++ K P S Y+ M+ L D L L M ++
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 75
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKI 219
+Y ++L KA + + AL +++ D V+ T+++ + D D+
Sbjct: 76 APNVFSYNTVLHGFCKANRVEN--ALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEA 133
Query: 220 GKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE------------HSGYKHNTI 267
+ ++ M V+T Y GF R VG+ GY+ N I
Sbjct: 134 CRVMDKMIQRGCQPNVIT-------YGTLVDGFCR-VGDLDGAVELVRKMTERGYRPNAI 185
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
TYN I+ L + + +EM++ G D+ TY I K ++DA +L E
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ P+V S LL + D L+ R+ G S + Y+ I
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS----GCSPNIVTYNTIIDGHC 301
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED------------------ 426
KLGR DEA +++ M + G +P+ +TY+ ++ CK G+ ED
Sbjct: 302 KLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLF 361
Query: 427 -----------------ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
AC +L M + GC+P++ ++ +I G C A +V +L +M
Sbjct: 362 TYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQM 421
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ N D + +I+ RV+ AY+L +I++ P T+ +L+ L +RR
Sbjct: 422 LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELF-NLIQESGCTPNLVTYNSLVHGLCKSRR 480
Query: 530 LEEAMNLLRLM-KKQNYPP---FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYL 584
++A LLR M +KQ P + + K V+ A + FL+ LS P Y
Sbjct: 481 FDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYS 540
Query: 585 QVFESF 590
V S
Sbjct: 541 IVISSL 546
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 156/349 (44%), Gaps = 8/349 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ N +YN +L + V + ++E+M G D+ +Y + K +++
Sbjct: 73 NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDE 132
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++ + M+ +P+V L+ + DL + K G + Y+ I
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVG--DLDGAVELVRKMTERGYRPNAITYNNI 190
Query: 380 HRALTKLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L + D A ++ K M+ +G PD TYS ++ L K+G+ +DAC +++ M G
Sbjct: 191 MHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKG 250
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P++ T++ L+ G C A ++D A +M + + +I+G R++ AY
Sbjct: 251 CSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAY 310
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
LL EM++ +P T+ L++ + E+A+ L+ +M ++ Y P +
Sbjct: 311 HLLEEMVDG-GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDM 369
Query: 556 ISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
K VE A + L ++ K P+ +Y V + +E LL
Sbjct: 370 FCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLL 418
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 123/236 (52%), Gaps = 8/236 (3%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L+K R D+A ++++ M + GF P+ +Y+ V+ G CKA R E+A +L++M
Sbjct: 47 YNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC PD+ ++T +I G C ++VD A KM+++ + L++GF ++
Sbjct: 107 MRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLD 166
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
GA +L+ +M E+ RP T+ ++ L R+L+ A+ L + M++ P P+ F
Sbjct: 167 GAVELVRKMTER-GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCP-PDVFTYS 224
Query: 553 --VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V + K G V+DA ++A+ K P+ Y + G+ EA LL +
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR 280
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 166/385 (43%), Gaps = 47/385 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TY+ +L L + + + +++ M + G +I TY I K +++A
Sbjct: 250 GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 309
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDG 378
L E M+DG +P+V ++LL + + +GLV + K G + Y+
Sbjct: 310 YHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK----GYVPNLFTYNS 365
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K + A +++ +M G P+ ++Y+ VI GLCKA + + +L++M N
Sbjct: 366 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 425
Query: 439 CIPDIKTWTILIQGHCAANEVDRAL------------------------LC--------- 465
C+PDI T+ +I C VD A LC
Sbjct: 426 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 485
Query: 466 -FAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
+ M + D++ + +I+G KRV+ AYKL ++M+ L P T+ +I
Sbjct: 486 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSD-GLAPDDVTYSIVIS 544
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYP 578
L R ++EA N+L LM K + P + I F G ++ A E L+ LS YP
Sbjct: 545 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 604
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLL 603
+ + GR +A +LL
Sbjct: 605 DVVTFSIFIDWLSKRGRLRQAGELL 629
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 151/347 (43%), Gaps = 42/347 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + + ILR L D EM K D TY + K ++DA
Sbjct: 5 GLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDA 63
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L E M+D + P+V Y+ +
Sbjct: 64 IRLLEEMVDNGFAPNVFS-------------------------------------YNTVL 86
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K R + A +++ M G PD ++Y+ VI GLCK + ++AC V+D+M + GC
Sbjct: 87 HGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 146
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ G C ++D A+ KM E+ Y +A + +++G S ++++ A +L
Sbjct: 147 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQL 206
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM E P T+ T+++ L+ + ++++A L+ M + P + + +
Sbjct: 207 FKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLC 266
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
K G +++A+ L+ ++ P+ Y + + GR EA LL
Sbjct: 267 KAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 125/518 (24%), Positives = 211/518 (40%), Gaps = 56/518 (10%)
Query: 77 DWSDELENKLEELSPK---LTHESVVYVL---RKLDNDPEKASAFFNWVCDKKQFRPSST 130
D + EL K+ E + +T+ ++++ L RKLD+ A F + + P
Sbjct: 166 DGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDS----ALQLFKEMEESGSCPPDVF 221
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
YS ++ +LV + + M C TY S+L L KA K + AL Q
Sbjct: 222 TYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQR- 280
Query: 191 DGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY--- 245
M + N+ T++D D+ LE+M V+T L +
Sbjct: 281 --MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338
Query: 246 --PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
A+G + E GY N TYN +L + + + V ++ M ++G ++ +
Sbjct: 339 GKAEDAIGLVEVMVEK-GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVS 397
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVAN 362
Y + K + + V L E M+ P + + ++ ++ D+ +F +
Sbjct: 398 YNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQ 457
Query: 363 K---------YESLGNSLSKS------------------------VYDGIHRALTKLGRF 389
+ Y SL + L KS Y+ + L K R
Sbjct: 458 ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRV 517
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D A K+ M + G PD++TYS VI LCK ++A NVL+ M +NG P T+ L
Sbjct: 518 DRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTL 577
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I G C +D+AL ++ K D + I+ + R+ A +LL M+ +
Sbjct: 578 IDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETML-RAG 636
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L P T+ TL++ A R E+A++L +M++ P
Sbjct: 637 LVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEP 674
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 148/354 (41%), Gaps = 43/354 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA- 180
+K + P+ Y+ +L KD +++ L M + C +Y +++ L KA K
Sbjct: 353 EKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVH 412
Query: 181 ---------------SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
D+ N D M K +D +A L +++ S +
Sbjct: 413 EGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVD-IAYELFNLIQESGCTPNL------ 465
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
++ N ++ L + R + +A R + G + ITYN ++ L + + V
Sbjct: 466 ----VTYNSLVHGLCKSRRFD-QAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRA 520
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ + +M +G D TY + K+R M++A + E M+ + P L+
Sbjct: 521 YKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDG 580
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA------LTKLGRFDEAEKMMKAM 399
N D L E L LSK Y + L+K GR +A ++++ M
Sbjct: 581 FCKTGNLDKAL--------EILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETM 632
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
AG PD +TY+ ++ G C A R EDA ++ + M + GC PD T+T L+ GH
Sbjct: 633 LRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV-GH 685
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 172/363 (47%), Gaps = 43/363 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKAGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +++G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ +PD+ T+ ++ G+C +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ M ++ P
Sbjct: 231 VSVDRVDDALRLVEEM-KGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A+ LKA+ P+ A + V E++ G + +A LL
Sbjct: 290 DNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLL 349
Query: 604 YKC 606
K
Sbjct: 350 DKV 352
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 139/529 (26%), Positives = 223/529 (42%), Gaps = 97/529 (18%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
+KASA F + DK +P + ++++LR L + L++ L RMKE C ++ Y +
Sbjct: 24 DKASAVFQEMIDK-SCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNA 82
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ KAK D +F MVK + V T ++V G K E
Sbjct: 83 LISGYSKAK---DFGQAFKFLAEMVKNHCLPTVV-TYTNIVDGL------------CKAE 126
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ + V +L E+R G N TYN I+ L + + ++
Sbjct: 127 RTRDAV-KLLDEMR---------------DKGCSPNIYTYNVIVEGLCEERKLDEAKKML 170
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL------ 343
EEM GY D+ TY + K +++A K M P P V + ++
Sbjct: 171 EEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKS 227
Query: 344 -------RSISSINN----PDL-------------GLVFRVANKYES---LGNSLSKSVY 376
R + ++N PD+ G V R +S LG + Y
Sbjct: 228 GDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAY 287
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + AL +LG +AE M+ M+ GF PD ++Y+ I GLCKA R + A V D M E
Sbjct: 288 NSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVE 347
Query: 437 NGCIP----------DIKTWTILIQGHCAANEVDRALLCFAKMM-EKNYDADADLLDVLI 485
GC P DI +T+L+ G C D A F+K++ EK + D +V++
Sbjct: 348 RGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 407
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ +++++ A ++ +M+EK T+ L+ L RL +A +L M + +
Sbjct: 408 DSHCKRRQIDKALQIHKQMLEKNCCN--VVTWNILVHGLCVDDRLSDAETMLLTMVDEGF 465
Query: 546 PPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEG 594
P FV Y GT+ DA + + SAA L++FE G
Sbjct: 466 IP---DFVTY----GTLVDA--------MCKCGKSAAALELFEEAVKGG 499
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 142/312 (45%), Gaps = 10/312 (3%)
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
GYE ++ TY K+ Q + + A +F+ M+D +P ++LLR + N L
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQ--LE 59
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
++ + + +G ++Y+ + +K F +A K + M P +TY+ ++
Sbjct: 60 KARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIV 119
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKA R DA +LDEM + GC P+I T+ ++++G C ++D A +M + Y
Sbjct: 120 DGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYF 179
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D + I G RV+ A K L M + P ++ T+I L + L+ A
Sbjct: 180 PDVVTYNSFIKGLCKCDRVDEARKFLARM----PVTPDVVSYTTVINGLCKSGDLDSASR 235
Query: 536 LLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFF 591
+L M + P + I F G VE A L + L + P+ AY + +
Sbjct: 236 MLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALH 295
Query: 592 NEGRHYEAKDLL 603
G +A+D+L
Sbjct: 296 RLGHIGKAEDML 307
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 108/238 (45%), Gaps = 14/238 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-------YEM---DIDTYIKI 307
E G+ + ++YN + L + E V+ V + M + G Y M DI Y +
Sbjct: 311 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVL 370
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
K ++A LF ++D +P V +++L S D L ++
Sbjct: 371 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKN 430
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
N ++ ++ +H L R +AE M+ M + GF PD +TY ++ +CK G+
Sbjct: 431 CCNVVTWNIL--VH-GLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + +E + GC+PD+ T++ LI G N + A L F K++E+ + D L +L
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 120/288 (41%), Gaps = 30/288 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N + YN +L L R + +++ EM++ G+ D+ +Y K ++ A
Sbjct: 279 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 338
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F+ M++ P+ S+L+ I L++ V + DG
Sbjct: 339 KAVFDRMVERGCTPNASSYSMLIVDI---------LLYTV--------------LLDG-- 373
Query: 381 RALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K GRFDEA + K + EPD Y+ ++ CK + + A + +M E C
Sbjct: 374 --LCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC 431
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
++ TW IL+ G C + + A M+++ + D L++ + A +
Sbjct: 432 C-NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L E + K P T+ LI L+ EEA L + ++ + P
Sbjct: 491 LFEEAV-KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVP 537
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 117/447 (26%), Positives = 194/447 (43%), Gaps = 63/447 (14%)
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL---KELRIYPVKALGFFRWVGEHS 260
K + V+ WD ++GK+LE +K +L+ V V+ K+L + A FF W G+
Sbjct: 121 KKINGVIRRRKWDAEMGKQLERLKFKLNPGLVCDVVVNQKDLHL----AKCFFTWAGQQD 176
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY H TY +++ LA + ++ M KEG+ + + + R F + A
Sbjct: 177 GYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGA 236
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSI--------SSINNPDLGLVFRV---ANKYESLGN 369
+++F M PS + +L + + I LG FR+ A + +
Sbjct: 237 LEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQ-FRIQPDAQTFRIFVH 295
Query: 370 SLSKS-----------------VYDGIHR------ALTKLGRFDEAEKMMKAMKNAGFEP 406
S ++S + G+H AL K G DEA K MKN P
Sbjct: 296 SFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSP 355
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ +TY+ ++ GL KAGR E+AC V EM+EN C PD + LI G A E D A F
Sbjct: 356 NVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLF 415
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M ++ + +++I+ R A++L ++ E+ + P T+ TLI+ L
Sbjct: 416 KEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAV-PDVFTYNTLIDVLGK 474
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA-- 581
++++ + +++ M ++ E + S GT+E A + EYPS
Sbjct: 475 GGQMDKVLAIIKEMVEKG----GECIISRDSNAGHEGTIEGADRTV------EYPSLGFK 524
Query: 582 -----AYLQVFESFFNEGRHYEAKDLL 603
Y + +F + G EA LL
Sbjct: 525 SLGEITYNTLMSAFIHNGHVDEAVKLL 551
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 127/544 (23%), Positives = 230/544 (42%), Gaps = 109/544 (20%)
Query: 110 EKASAFFNWVCDKKQFR--PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY 167
++A FFN + K R P+ Y+ ++ L L++ MKE++C + Y
Sbjct: 339 DEACKFFNGM---KNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAY 395
Query: 168 LSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK 227
+++ L KA +A D+A G+ KE+ + L
Sbjct: 396 NTLIDGLGKAGEA-DMAC------GLFKEMKDRGLVPNL--------------------- 427
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+ N +++VL + P +A F + E G + TYN ++ VL + +
Sbjct: 428 --RTYNIMISVLGKAGRQP-EAWQLFHDLKEQ-GAVPDVFTYNTLIDVLGKGGQMDKVLA 483
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+++EM ++G E ISR D+ E ++G + +V+ SL +S+
Sbjct: 484 IIKEMVEKGGE------CIISR---------DSNAGHEGTIEGADR-TVEYPSLGFKSLG 527
Query: 348 SINNPDLGLVF-------------RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
I L F V K+E + ++ Y + L K GR DEA
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVT---YTTLVDGLGKAGRLDEAVS 584
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ M+ G EP +TYS ++ K + E++ ++ DEM GC+ D+ T++++I C
Sbjct: 585 LLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLC 644
Query: 455 AANEVDRALLCFAKMMEK-------NYDA----------------------------DAD 479
+++VD+AL F +M E+ NY D
Sbjct: 645 KSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTF 704
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ ++++NG + RV+ A K LV+ ++ + P T+ +L++ L + RLEEA N+
Sbjct: 705 VYNIMVNGLVKSNRVDEACK-LVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 540 MKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGR 595
M ++ + P + + + K G + A +A++ K P Y + +S EGR
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 596 HYEA 599
EA
Sbjct: 824 VEEA 827
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/462 (26%), Positives = 192/462 (41%), Gaps = 51/462 (11%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ S++ K D + E S F V +K + YSL++ L D + Q
Sbjct: 599 VTYSSLMASFYKRDQEEESLSLFDEMV--RKGCVADVSTYSLVINCLCKSDDVDQALDVF 656
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN-VAKTLVDVVL 211
RMKE+ Y ++L L K +K AL F++ + D V +V+ ++
Sbjct: 657 GRMKEEGMEPLLGNYKTLLSSLVKDEKID--FALQIFNELQESSLVPDTFVYNIMVNGLV 714
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
S+ D+ K ++ MK + I P + TY
Sbjct: 715 KSNRVDEACKLVDSMKNQ-------------NILP------------------DLFTYTS 743
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+L L + + + +N+ +M +EG+E D+ Y + K + A+ +F M
Sbjct: 744 LLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKR 803
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------VYDGIHRALTK 385
P V S L+ S LG RV Y NS+SK VY + + K
Sbjct: 804 CVPDVVTYSSLIDS--------LGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGK 855
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G D A ++ + M+ P+ +TY+ ++ GL KAGR A +L+EME+ GC+PD+ T
Sbjct: 856 KGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVT 915
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ILI G VD A F +M EK D LI ++ A +L M
Sbjct: 916 YNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM- 974
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
E+ P T+ LI+ L A ++ EA + MK + P
Sbjct: 975 EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMP 1016
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/484 (22%), Positives = 209/484 (43%), Gaps = 27/484 (5%)
Query: 74 LACDWSDELENKLEELSPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVY 132
+AC E++++ L P L T+ ++ VL K PE F + ++ P Y
Sbjct: 410 MACGLFKEMKDR--GLVPNLRTYNIMISVLGKAGRQPEAWQLFHDL--KEQGAVPDVFTY 465
Query: 133 SLMLRNLVNKDSLKQFWVTLRRM--KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
+ ++ L + + ++ M K C I ++ G ++ A + + +L
Sbjct: 466 NTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKS 525
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-------IELSDNFVLTVLKELR 243
G EI + TL+ + + D+ K LE MK + V + K R
Sbjct: 526 LG---EITYN----TLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ R + E G + + +TY+ ++ + + + ++ +EM ++G D+ T
Sbjct: 579 LD--EAVSLLREM-EKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVST 635
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + K ++ A+ +F M + +P + + LL S+ + + + ++ N+
Sbjct: 636 YSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSL--VKDEKIDFALQIFNE 693
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ VY+ + L K R DEA K++ +MKN PD TY+ ++ GL K+GR
Sbjct: 694 LQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGR 753
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E+A N+ +M E G PD+ +T L+ ++ AL+ F M +K D
Sbjct: 754 LEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSS 813
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI+ + RV AY I K P + +LI+ ++ A+ L M+++
Sbjct: 814 LIDSLGKEGRVEEAYYFFENSISK-GCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRR 872
Query: 544 NYPP 547
PP
Sbjct: 873 QCPP 876
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 126/529 (23%), Positives = 212/529 (40%), Gaps = 76/529 (14%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
E+ K E + +T+ ++V L K E S +K+ PS YS ++ +
Sbjct: 552 EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM--EKQGCEPSVVTYSSLMASFY 609
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
+D ++ M C + TY ++ L K+ AL+ F G +KE M+
Sbjct: 610 KRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQ--ALDVF--GRMKEEGME 665
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
+ LG ++ + ++D KI+ F L + EL + S
Sbjct: 666 PL--------LG-NYKTLLSSLVKDEKID----FALQIFNEL---------------QES 697
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+T YN ++ L + V + +V+ MK + D+ TY + K +E+A
Sbjct: 698 SLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEA 757
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F M + ++P V VA Y SL + L K
Sbjct: 758 FNMFTKMTEEGHEPDV-----------------------VA--YTSLMDVLGKG------ 786
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G+ A + +AM PD +TYS +I L K GR E+A + GC
Sbjct: 787 ------GKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCT 840
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ ++ LI VDRAL F +M + + + L++G R+N A KL
Sbjct: 841 PNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L EM EKV P T+ LI+ + ++EA + + MK++ P F I G
Sbjct: 901 LEEM-EKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959
Query: 561 TVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V+ +A E ++ + Y PS Y + + G+ +EA + ++
Sbjct: 960 KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHE 1008
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 151/358 (42%), Gaps = 34/358 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + VY++M+ LV + + + + MK + + TY S+L L K+ + + A
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEE--AF 758
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
N F + D VA T + VLG G KL I + + + R P
Sbjct: 759 NMFTKMTEEGHEPDVVAYTSLMDVLGK------GGKLSHALI------IFRAMAKKRCVP 806
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ +TY+ ++ L + V + + E +G ++ Y
Sbjct: 807 ------------------DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F K M++ A++LFE M P++ + LL ++ L + ++ + E
Sbjct: 849 LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR--LNVAEKLLEEMEK 906
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G Y+ + + K+G DEAE K MK G PD IT++ +I L K + +
Sbjct: 907 VGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLE 966
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
AC + D MEE G P + T+ +LI A +V A + F +M K D + ++
Sbjct: 967 ACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
>gi|255660920|gb|ACU25629.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
Length = 484
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKEGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP ++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRFMMAKRYFNKMLSEGIEPTRHXFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ ++D A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYMAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F + IS K G ++ A++ LKA+ P+ A + V E+F G+H +A LL
Sbjct: 290 DNSIFXRLISSQCKTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 154/331 (46%), Gaps = 4/331 (1%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
D + + L + +S++ V VLK + A GFF+W +GY+H+ +YN ++ +L
Sbjct: 104 DAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDIL 163
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ + W +VEEM + G + + T K+ R+ + +DA++ F M K
Sbjct: 164 GKLKKFDLMWELVEEMDRLGGYVSLATMTKVMRRLARASRWKDAIEAFRGMERFGVKKDT 223
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ L+ ++ N+ + V K L L+ ++ + K + D A K M
Sbjct: 224 LAMNTLMDALVKENSVEHANDVFVEFKDSIL---LNPHTFNVLIHGWCKARKMDNALKSM 280
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
MK GF PD I+Y+ ++ C+ F +VL+EMEE GC P++ T+TI++
Sbjct: 281 AEMKEHGFCPDVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKG 340
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
E+ +AL + KM + D LI R+ A + +M ++ + P T
Sbjct: 341 KEISKALEVYEKMKGSSCVPDTSFYSSLIYILSKAGRLKDARDVFEDMTKQGAI-PDVLT 399
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ T+I + E+A+ LL M++ + P
Sbjct: 400 YNTMISAACMHSQEEDALKLLLKMEESSCKP 430
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 169/423 (39%), Gaps = 56/423 (13%)
Query: 96 ESVV-YVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRR 154
ES+V VL++ ND A FF W + +R S Y+ M+ L W +
Sbjct: 119 ESLVEQVLKRFSNDWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEE 178
Query: 155 MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK-EIAMDNVA-KTLVDVVLG 212
M Y+ T ++ L +A + D A+ F GM + + D +A TL+D ++
Sbjct: 179 MDRLGGYVSLATMTKVMRRLARASRWKD--AIEAFR-GMERFGVKKDTLAMNTLMDALV- 234
Query: 213 SDWDDKIGKKLEDMKIELSDNFVL-----TVLKELRIYPVK---ALGFFRWVGEHSGYKH 264
+ + D+ +E D+ +L VL K AL + EH G+
Sbjct: 235 ---KENSVEHANDVFVEFKDSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEH-GFCP 290
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ I+Y I+ R + R +V+ EM+++G ++ TY + K + + A++++
Sbjct: 291 DVISYTSIVEAYCREKDFRKVNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVY 350
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M P S Y + L+
Sbjct: 351 EKMKGSSCVPDT-------------------------------------SFYSSLIYILS 373
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR +A + + M G PD +TY+ +I C + EDA +L +MEE+ C PD+
Sbjct: 374 KAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLN 433
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ L++ C N + M + + + +L++G ++ A EM
Sbjct: 434 TYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFFEEM 493
Query: 505 IEK 507
+ K
Sbjct: 494 VSK 496
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H + TYN ++ +LA+
Sbjct: 152 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQF 211
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 212 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 270
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 271 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 326 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 444
Query: 521 IEKLLGARRLEE 532
I KL+ +++ E
Sbjct: 445 I-KLMANQKMPE 455
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 184/464 (39%), Gaps = 70/464 (15%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 125 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F +S Y+ M+ L + L M + ET+ +
Sbjct: 182 FCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 240
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 241 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 295
Query: 236 LTVLKELRIYPVKALGFFR----------W--VGEHSGYKHNTITYNGILRVLARHESVR 283
++ Y V G+ R W + +H G K + + +N +L L R
Sbjct: 296 PNMM----TYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKS 350
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
D + MK +G ++ +Y + R F K ME A++ F+ M+D +P
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA------- 403
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+VY + + D +++K M+ G
Sbjct: 404 ------------------------------AVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TY+ +I + E + ++M +N P I T+ ++++ + A +
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 493
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +M++K D + VLI G +S+ + A + L EM++K
Sbjct: 494 AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 148/302 (49%), Gaps = 9/302 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ + L + VL + A FF W + Y+H Y +++VL++ +
Sbjct: 72 LQESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLSKMKQF 131
Query: 283 RDFWNVVEEMKKEGYEMDI-DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
W ++EEM+++ + + ++ + R+F RM+ A+++ + M +P
Sbjct: 132 GAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVNKAIEVLDEMPKYGCEPDEYVFGC 191
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAM 399
LL ++ G V A+ +E + S S+ + + K G+ EA+ ++ M
Sbjct: 192 LLDALCKN-----GSVKEAASLFEDMRVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQM 246
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
+ AGFEPD + Y+ ++ G AG+ DA ++L E+ GC P+ ++TILIQ C ++
Sbjct: 247 REAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKM 306
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A+ F +M DAD L++GF + ++ Y++L MI+K + P Q T+
Sbjct: 307 DEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHM-PNQLTYLH 365
Query: 520 LI 521
L+
Sbjct: 366 LM 367
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 96/460 (20%), Positives = 179/460 (38%), Gaps = 41/460 (8%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
+LE L+E L + VL + + A FF W + +R Y M++ L
Sbjct: 67 KLELALQESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQPCYRHCYENYKAMIKVLS 126
Query: 141 NKDSLKQFWVTLRRMKEDH-CYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
W L M+ D+ I E ++ V+++ + + + D M K
Sbjct: 127 KMKQFGAVWALLEEMRRDNSVLITSEVFVV---VMRRFASSRMVNKAIEVLDEMPKYGCE 183
Query: 200 DN--VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
+ V L+D + + + EDM++ S +
Sbjct: 184 PDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSL----------------------- 220
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
KH T G + + + +V+ +M++ G+E DI Y + + M
Sbjct: 221 -----KHFTCLLYG----WCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKM 271
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA L + + P+ ++L++++ D + RV + E G Y
Sbjct: 272 GDAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAM--RVFVEMERSGCDADVVTYT 329
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K D+ +++++M G P+ +TY ++ K E+ ++ EM++
Sbjct: 330 ALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKI 389
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GCIPD+ + ++I+ C EV+ + + +M D ++INGFL + A
Sbjct: 390 GCIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEA 449
Query: 498 YKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNL 536
+ EM+E+ L Q K L+ LL +LE A +L
Sbjct: 450 CQYFKEMVERGLLSSRQYGILKDLLNALLRGEKLELAKDL 489
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/286 (20%), Positives = 106/286 (37%), Gaps = 43/286 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +Y +++ L E + + V EM++ G + D+ TY + F K+RM++
Sbjct: 285 GCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKG 344
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ + M+ + P+ + L ++ +L + + + +G S+Y+ +
Sbjct: 345 YQILQSMIQKGHMPN--QLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVI 402
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG-- 438
R KLG + M+ +G P T+ +I G G +AC EM E G
Sbjct: 403 RLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGLL 462
Query: 439 -----------------------------------CIPDIKTWTILIQGHCAANEVDRAL 463
C ++ +WTI I + V A
Sbjct: 463 SSRQYGILKDLLNALLRGEKLELAKDLWSCIVTKGCELNVDSWTIWIHALFSNGHVKEAC 522
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
MM+ + + L+ G +K N + E+ EKVR
Sbjct: 523 SYCLDMMDADLMPKPETFAKLMRGL--RKLYNRQFA--AEITEKVR 564
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + T+ ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P+V S L+ S+ + + F + ++ + G S + Y+ +
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCK--DRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L KL + +M M ++ PD T + V+ LCK G +A +V+D M G
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC NEVD A+ F M+ K+ A+ + LING+ + V+ A L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYIS 557
EM + L P T+ TLI L RL++A++L M + P Y+
Sbjct: 373 FEEM-SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K ++ A LKA+ + P Y + + G +A+DL
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 5/288 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN ++ L + + ++ EM D+ T + K M+ +A
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 299
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ + M+ +P+V + L+ N D+ + VF + + N +S Y+ +
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS---YNTL 356
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K+ D+A + + M P+ +TY+ +I GLC GR +DA ++ EM G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IPD+ T+ L C +D+A+ + N+D D + +++G + A
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L + K L+P T+ +I L L EA L M K P
Sbjct: 477 LFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 22/267 (8%)
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
S DF ++ + K + T + +SRQ F + P V +
Sbjct: 69 STVDFNRLLTSIAKTKHH---STLLSLSRQMDSFGI----------------PPDVYTLA 109
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
+++ S+ +N D F K LG+ + + + R L G+ EA + M
Sbjct: 110 IVINSLCHLNRVDFA--FSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
GF+P+ +TY +I GLCK G A +L ME+ C P++ ++ LI C +V
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A F++M+ K + + LI+G L+ EM++ ++ P T T+
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTV 286
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ L + EA +++ +M + P
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEP 313
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L ++D ++ EM G D+ TY +S K R ++ A+ L
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + + P +Q + ++ DG+ RA
Sbjct: 444 KAIEGSNWDPDIQ---------------------------------IYTTILDGMCRA-- 468
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + + G +P+ TY+ +I GLCK G +A + EM +NGC P+
Sbjct: 469 --GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
T+ ++ +G NE R + +M+ + + D +L+ G LS ++ + K
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 580
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 168/398 (42%), Gaps = 29/398 (7%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + +++ L K ++ ++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-- 228
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWD--DKIGKKLEDMKIELSDNFVLTV 238
A N F + + K I+ + V T ++ G +W + ++ D KI + D F L
Sbjct: 229 AFNIFSEMITKGISPNIV--TYNSLIHGLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNT 285
Query: 239 LKELRIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ V AL V E H G + N +TYN ++ V V
Sbjct: 286 V-------VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+ M + ++ +Y + + K + ++ A+ LFE M P+ + L+ + +
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
L + ++ + G Y + L K D+A ++KA++ + ++PD
Sbjct: 399 GR--LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y+ ++ G+C+AG EDA ++ + G P++ T+ I+I G C + A F++M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ + +++ GFL +LL EM+ +
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 173/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDXDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M KN + + LI G+
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ ++ K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ G++ +A LL
Sbjct: 290 DNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 164/347 (47%), Gaps = 20/347 (5%)
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K+EGY D+ Y ++ + R +AV+ F+ + +PS+ +++++ ++ NP
Sbjct: 36 KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA----EKMMKAMKNAGFEPDN 408
G +R SLG + Y+ + + LGR A KM K K P+
Sbjct: 96 --GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKTCK-----PNV 148
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TY+ VI GLCK G+ + A ++ + + PD T++ L+ G C A ++ A+ +
Sbjct: 149 ATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDM 208
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+E NYD DA + + +GF ++RV+ A ++L MI++ +P T+ +I + +
Sbjct: 209 MLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQR-GCKPSVVTYNCIINGVCQYK 267
Query: 529 -RLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALS-VKEYPSSAAY 583
R+EEA L + M + PP + I SK V+ E K +S P AY
Sbjct: 268 NRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAY 327
Query: 584 LQVFESFFNEGRHYEAKDLLYKCP-HHIRQDSKI--SLLFGSAKSNK 627
+ +F + EAK +L +H+ D + +L+ G ++ K
Sbjct: 328 HSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARK 374
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/457 (19%), Positives = 172/457 (37%), Gaps = 71/457 (15%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI- 170
A FF+W ++ +R Y+ +L +LV ++ +R HC ++ I
Sbjct: 27 ARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIII 86
Query: 171 ---------------LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDW 215
LG ++ D+ A N G + V + L+
Sbjct: 87 QCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCD---LGRVGRALI-------- 135
Query: 216 DDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
K GK + K ++ N V+ L + F R H + TY+ ++
Sbjct: 136 --KFGKMGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRL--PHDLVDPDGFTYSTLVH 191
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + E + V + M + Y+ D Y ++ F K R +++A+++ + M+ KP
Sbjct: 192 GLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKP 251
Query: 335 SVQDCSLLLRSISSINN------------------PD--------LGL--VFRVANKYE- 365
SV + ++ + N P+ LGL ++ V E
Sbjct: 252 SVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLEL 311
Query: 366 -----SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
G S Y + A K+ + DEA+ +++ PD Y+ +I G C+
Sbjct: 312 FKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCR 371
Query: 421 A--GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
A R ++A + M++ P++ T+ I+++G C D A F +M + +
Sbjct: 372 ARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNR 431
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
V+ G + + + ++ ++M+ K R WQ
Sbjct: 432 MTFKVMTMGMIHCGKTDKFERIFMDMVYKGR---WQG 465
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + T+ ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 135 GHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAA 194
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P+V S L+ S+ + + F + ++ + G S + Y+ +
Sbjct: 195 IRLLRSMEQGNCQPNVVVFSTLIDSLCK--DRQVTEAFNIFSEMITKGISPNIVTYNSLI 252
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L KL + +M M ++ PD T + V+ LCK G +A +V+D M G
Sbjct: 253 HGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVE 312
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC NEVD A+ F M+ K+ A+ + LING+ + V+ A L
Sbjct: 313 PNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYL 372
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYIS 557
EM + L P T+ TLI L RL++A++L M + P Y+
Sbjct: 373 FEEM-SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K ++ A LKA+ + P Y + + G +A+DL
Sbjct: 432 KNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDL 477
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 121/288 (42%), Gaps = 5/288 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN ++ L + + ++ EM D+ T + K M+ +A
Sbjct: 240 GISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEA 299
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ + M+ +P+V + L+ N D+ + VF + + N +S Y+ +
Sbjct: 300 HDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVIS---YNTL 356
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K+ D+A + + M P+ +TY+ +I GLC GR +DA ++ EM G
Sbjct: 357 INGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQ 416
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IPD+ T+ L C +D+A+ + N+D D + +++G + A
Sbjct: 417 IPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARD 476
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L + K L+P T+ +I L L EA L M K P
Sbjct: 477 LFSNLSSK-GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 22/267 (8%)
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
S DF ++ + K + T + +SRQ F + P V +
Sbjct: 69 STVDFNRLLTSIAKTKHH---STLLSLSRQMDSFGI----------------PPDVYTLA 109
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
+++ S+ +N D F K LG+ + + + R L G+ EA + M
Sbjct: 110 IVINSLCHLNRVDFA--FSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 167
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
GF+P+ +TY +I GLCK G A +L ME+ C P++ ++ LI C +V
Sbjct: 168 GEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVT 227
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A F++M+ K + + LI+G L+ EM++ ++ P T T+
Sbjct: 228 EAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDS-KIMPDVFTLNTV 286
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ L + EA +++ +M + P
Sbjct: 287 VDALCKEGMVAEAHDVVDMMIHRGVEP 313
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L ++D ++ EM G D+ TY +S K R ++ A+ L
Sbjct: 384 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 443
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + + P +Q + ++ DG+ RA
Sbjct: 444 KAIEGSNWDPDIQ---------------------------------IYTTILDGMCRA-- 468
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + + G +P+ TY+ +I GLCK G +A + EM +NGC P+
Sbjct: 469 --GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 526
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
T+ ++ +G NE R + +M+ + + D +L+ G LS ++ + K
Sbjct: 527 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/398 (21%), Positives = 168/398 (42%), Gaps = 29/398 (7%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + +++ L K ++ ++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTE-- 228
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWD--DKIGKKLEDMKIELSDNFVLTV 238
A N F + + K I+ + V T ++ G +W + ++ D KI + D F L
Sbjct: 229 AFNIFSEMITKGISPNIV--TYNSLIHGLCKLCEWKHVTTLMNEMVDSKI-MPDVFTLNT 285
Query: 239 LKELRIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ V AL V E H G + N +TYN ++ V V
Sbjct: 286 V-------VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+ M + ++ +Y + + K + ++ A+ LFE M P+ + L+ + +
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
L + ++ + G Y + L K D+A ++KA++ + ++PD
Sbjct: 399 GR--LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQ 456
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y+ ++ G+C+AG EDA ++ + G P++ T+ I+I G C + A F++M
Sbjct: 457 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ + +++ GFL +LL EM+ +
Sbjct: 517 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLAR 554
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 163/336 (48%), Gaps = 7/336 (2%)
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
+L + + + L + +E+S V+ VL +L + AL FFRW + G+ HNT +
Sbjct: 64 ILSTTPESPVDVSLRNFPVEVSPELVVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIF 123
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
+ ++ L + + WN+V+EMK+ ++ DT+ I+R++ + +++++A+K FE M
Sbjct: 124 HALIEALGKIRQFKMIWNLVDEMKQRKL-LNGDTFSLIARRYVRAKVIKEALKTFERMEK 182
Query: 330 GPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
KP + D + L+ + S + +F ++ N S ++ L
Sbjct: 183 YGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNLKSYTILIEGWSQQQNLL 242
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ DE + + MK+ GF+PD +TY +I CKA ++++A + +M P +
Sbjct: 243 KVDE---VCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYC 299
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I G + +D A F K + +A + +++ + R++ AY+++ EM E
Sbjct: 300 TFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKE- 358
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ + P T+ ++ L+ R +EA ++ + M +
Sbjct: 359 LGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSE 394
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 109/517 (21%), Positives = 201/517 (38%), Gaps = 92/517 (17%)
Query: 36 FHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTH 95
FHI F S + H T +I ST+P S +++ L N E+SP+L
Sbjct: 40 FHIFPFHTSLLHKPNNPHAETICRIL-STTPESPVDV--------SLRNFPVEVSPEL-- 88
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRM 155
VV VL KL N A +FF W ++ F ++ ++ ++ L K W + M
Sbjct: 89 --VVAVLNKLSNAGILALSFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEM 146
Query: 156 KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMDNVAKTLVDVVL 211
K+ + +T+ I +AK + AL F G+ +I+ N L+DV+
Sbjct: 147 KQRK-LLNGDTFSLIARRYVRAKVIKE--ALKTFERMEKYGLKPQISDFN---KLIDVLC 200
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
S + + ++L D +++ + P N +Y
Sbjct: 201 KSKFHVEKAQELFDK------------MRQWNLEP------------------NLKSYTI 230
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ ++ +++ V EMK +G++ D+ TY I + K + ++A+ ++ M+
Sbjct: 231 LIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKN 290
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
PS + + N + F K ++ G Y+ + A R D+
Sbjct: 291 VNPSPHIYCTFITGLG--NGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDD 348
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA------------------------ 427
A +++ MK G P+ TY ++ L K GR ++A
Sbjct: 349 AYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMV 408
Query: 428 ---CN---------VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
CN V +EM++ G +P I ++ LI C N++D A F +M++
Sbjct: 409 RMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIR 468
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
A++ ++ N + ++K+R P
Sbjct: 469 PTANMFSAFKRALMAAGMENTVIH-FAKKVDKLRNTP 504
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/236 (22%), Positives = 100/236 (42%), Gaps = 10/236 (4%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG-RFEDACN 429
L+ + I R + EA K + M+ G +P ++++I LCK+ E A
Sbjct: 152 LNGDTFSLIARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQE 211
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ D+M + P++K++TILI+G + + +M + + D ++IN +
Sbjct: 212 LFDKMRQWNLEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYC 271
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
K+ + A + +M+ K + P + T I L R++EA K +PP
Sbjct: 272 KAKKYDEAIGIYHDMLSK-NVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEA 330
Query: 550 EPFVQYISKFG---TVEDASEF---LKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ +S + ++DA +K L + P++ Y + GR EA
Sbjct: 331 PTYNAVVSAYCWSMRIDDAYRIVGEMKELGIG--PNARTYDIILVHLIKGGRTKEA 384
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 101/228 (44%), Gaps = 8/228 (3%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
FR A K + G + + ++ + AL K+ +F ++ MK + T+S +
Sbjct: 107 FRWAEKQQ--GFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLL-NGDTFSLIARR 163
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN-EVDRALLCFAKMMEKNYDA 476
+A ++A + ME+ G P I + LI C + V++A F KM + N +
Sbjct: 164 YVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEP 223
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ +LI G+ Q+ + ++ EM + +P T+ +I A++ +EA+ +
Sbjct: 224 NLKSYTILIEGWSQQQNLLKVDEVCREMKDD-GFQPDVVTYGIIINAYCKAKKYDEAIGI 282
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKEYPSSA 581
M +N P P + +I+ G +++A EF + +P A
Sbjct: 283 YHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEA 330
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 144/322 (44%), Gaps = 8/322 (2%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+ +SD V +L+ V A GFF W G GY+H+ +YN ++ +L + + W
Sbjct: 122 VRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWG 181
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ +M + G + + T K+ R+ DA+ F M ++LL ++
Sbjct: 182 LISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNVLLDTLC 241
Query: 348 SINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ V R ++ L S+ +S ++ + K +EA MMK M+ GF+
Sbjct: 242 KERS-----VKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGFK 296
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P ITY+ +I C F+ +L+EM GC P++ T+TI++ A AL
Sbjct: 297 PSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDI 356
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F K+ DA + LI R+ A +V+ + +RP ATF TLI
Sbjct: 357 FDKVRGDGCAPDASFYNSLIYILGRAGRLEDANS-VVDKMRMTGVRPTVATFNTLISAAC 415
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
+ E A+ +L M++Q+ P
Sbjct: 416 DHSQAENALKMLVKMEEQSCKP 437
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 4/292 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T N +L L + SV+ +E++ D ++ + + K RMM +A
Sbjct: 225 GVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGS-VPPDESSFNTLVHGWCKARMMNEA 283
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M + +KPSV + L+ + D V+ + N+ S G + Y +
Sbjct: 284 RDMMKEMEEHGFKPSVITYTSLIEAYCM--EKDFQTVYAILNEMRSKGCPPNVITYTIVM 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR EA + ++ G PD Y+ +I+ L +AGR EDA +V+D+M G
Sbjct: 342 HALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVR 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+ LI C ++ + AL KM E++ D L+ ++ + L
Sbjct: 402 PTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFL 461
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ M K + P +T+ L+ L + ++ L M + + P E F
Sbjct: 462 ICHMFRK-DITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETF 512
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/442 (21%), Positives = 181/442 (40%), Gaps = 54/442 (12%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVT 151
+++ V +LR+ +D A FF W ++ +R S+ Y+ M+ L W
Sbjct: 123 RVSDRMVDKILRRFGSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMWGL 182
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFHD-GMVKEIAMDNVAKTLVDV 209
+ +M E + T ++ L A + +D + A N+ G+VK+ NV L+D
Sbjct: 183 ISQMDEIGGLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQFGVVKDTTAMNV---LLDT 239
Query: 210 VLGSDWDDKIGKKLEDMKI-----ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+ + ++++ E S N ++ + R+ +A + + EH G+K
Sbjct: 240 LCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMN-EARDMMKEMEEH-GFKP 297
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITY ++ + + + ++ EM+ +G ++ TY + K ++A+ +F
Sbjct: 298 SVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALDIF 357
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+K G + S Y+ + L
Sbjct: 358 -------------------------------------DKVRGDGCAPDASFYNSLIYILG 380
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR ++A ++ M+ G P T++ +I C + E+A +L +MEE C PDIK
Sbjct: 381 RAGRLEDANSVVDKMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIK 440
Query: 445 TWTILIQGHCAAN--EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T L++ C +V R L+C M K+ D +L+ + + L
Sbjct: 441 TYTPLLKLCCKRQWIKVLRFLIC--HMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLE 498
Query: 503 EMIEKVRLRPWQATFKTLIEKL 524
EM+ K P + TF + EKL
Sbjct: 499 EMVLK-GFAPKKETFDLVAEKL 519
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N T+N ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 124 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 183
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + ++ G S S Y+ +
Sbjct: 184 IRLLRSMEQGNCQPDVVVYTSIIDSLC--KDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 241
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ P+ + +S V+ LCK G+ +A +V+D M + G
Sbjct: 242 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC +E+D A+ F M+ K + D LING+ +R+ A L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPE--PFVQYIS 557
EM K L P T+ TL+ L RL++A+ L ++ + P F + Y+
Sbjct: 362 FEEMCRK-ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 420
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K +++A LKA+ P Y V + G A+DL
Sbjct: 421 KNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 466
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 169/397 (42%), Gaps = 27/397 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L S LR M++ +C + Y SI+ L K ++ +
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ-- 217
Query: 185 ALNQF----HDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL--T 237
A N F H G+ I +++ L ++ +W E + ++ N V+ T
Sbjct: 218 AFNLFSEMIHQGISPSIFTYNSLIHALCNL---CEWKHVTALLNEMVNSKIMPNVVIFST 274
Query: 238 VL-------KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
V+ K + + V + R G + N +TYN ++ + + V +
Sbjct: 275 VVDALCKEGKVMEAHDVVDMMIKR------GVEPNVVTYNALMDGHCLRSEMDEAVKVFD 328
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M +G+ D+ +Y + + K + +E A+ LFE M P+ S L+ + +
Sbjct: 329 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 388
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
L + ++ + G Y + L K R DEA ++KA++ + +PD
Sbjct: 389 R--LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 446
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ VI G+C+AG E A ++ + G P++ T+TI+I G C + A F +M
Sbjct: 447 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 506
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
K Y + +++ GFL +LL EM+ +
Sbjct: 507 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 543
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ ++L+ S + LG F V K LG+ + + ++ + R L G+ E
Sbjct: 92 PNIYTLNILINSFCHLQR--LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL 149
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF+P+ +TY +I GLCK G A +L ME+ C PD+ +T +I
Sbjct: 150 HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 209
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V +A F++M+ + + LI+ + LL EM+ ++ P
Sbjct: 210 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS-KIMPN 268
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L ++ EA +++ +M K+ P
Sbjct: 269 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 302
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 1/174 (0%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S ++ H D+A M + P +++++ + K + ++ +
Sbjct: 25 SSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQ 84
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M+ G P+I T ILI C + A AK+++ + + + LI G + +
Sbjct: 85 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 144
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ L +MI + +P T+ TLI L A+ LLR M++ N P
Sbjct: 145 IGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 197
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 22/197 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TY+ ++ L ++D + EM G D +Y + K R +++A+ L
Sbjct: 373 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALL 432
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH---- 380
+ + P +Q ++++ + A + E+ + S G+H
Sbjct: 433 KAIEGSNMDPDIQIYTIVIDGMCR------------AGELEAARDLFSNLSSKGLHPNVW 480
Query: 381 ------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L + G EA K+ MK G+ P+ TY+ + G + +L EM
Sbjct: 481 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 540
Query: 435 EENGCIPDIKTWTILIQ 451
G D+ T T+L++
Sbjct: 541 LARGFSADVSTSTVLVE 557
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 175/390 (44%), Gaps = 17/390 (4%)
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
V+ + + +I L+ + + +S V VLK L + AL FFRW G++++ +
Sbjct: 98 VVSAQPEHRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGF 157
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
+ ++ L + + R W++VE M+ + DT+ I R++ + R +++AV+ FE M
Sbjct: 158 HNLIEALGKIKQFRLVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSS 216
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
K + D + L+ +S +V + K + + T L
Sbjct: 217 FGLKTDLSDYNWLIDILSKSK--------QVKKAHAIFKEMKRKGRFIPDLKTYTVLMEG 268
Query: 390 DEAEK---MMKA----MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
EK M+KA M +AG +PD + Y +I CK+G+ ++A V EMEE+GC+P
Sbjct: 269 WGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPS 328
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +LI G + +D AL F E + + + +I + + A+K++
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
EM K + P T+ ++ L+ + ++EEA NL + M++ P + + F +
Sbjct: 389 EM-RKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSN 447
Query: 563 EDASEFLKALSVKEYPSSAAYLQVFESFFN 592
E LK + + +F + N
Sbjct: 448 ERVDMALKVWKQMKEKGVLPCMHMFSALIN 477
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 198/461 (42%), Gaps = 40/461 (8%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L+ L ++ + V VL+ L N A AFF W ++ FR S+ + ++ L
Sbjct: 111 LDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQF 170
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT 205
+ W + M+ C + ++T+ I+ +A+K + A+ F M +
Sbjct: 171 RLVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKE--AVETFEK-------MSSFG-- 218
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+K +LSD N+++ +L + + KA F+ + +
Sbjct: 219 --------------------LKTDLSDYNWLIDILSKSKQVK-KAHAIFKEMKRKGRFIP 257
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TY ++ + + V +EM G + D+ Y + F K ++A+K+F
Sbjct: 258 DLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVF 317
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + PS +L+ + S+ D L + +K ES G + + + A
Sbjct: 318 HEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK-ES-GFPMEVPTCNAVIGAYC 375
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ F A KM+ M+ +G P+ TY ++ L K+ + E+A N+ ME +GC P++
Sbjct: 376 RALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELN 435
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T+++ C+ VD AL + +M EK + LING R+ A EM
Sbjct: 436 TYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEM 495
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRL---EEAMNLLRLMKK 542
++K +RP F L E L+ R+ +E L ++++
Sbjct: 496 LDK-GIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRR 535
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N T+N ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 133 GHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAA 192
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + ++ G S S Y+ +
Sbjct: 193 IRLLRSMEQGNCQPDVVVYTSIIDSLC--KDRQVTQAFNLFSEMIHQGISPSIFTYNSLI 250
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ P+ + +S V+ LCK G+ +A +V+D M + G
Sbjct: 251 HALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC +E+D A+ F M+ K + D LING+ +R+ A L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPE--PFVQYIS 557
EM K L P T+ TL+ L RL++A+ L ++ + P F + Y+
Sbjct: 371 FEEMCRK-ELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLC 429
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K +++A LKA+ P Y V + G A+DL
Sbjct: 430 KNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDL 475
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 169/397 (42%), Gaps = 27/397 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L S LR M++ +C + Y SI+ L K ++ +
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQ-- 226
Query: 185 ALNQF----HDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL--T 237
A N F H G+ I +++ L ++ +W E + ++ N V+ T
Sbjct: 227 AFNLFSEMIHQGISPSIFTYNSLIHALCNLC---EWKHVTALLNEMVNSKIMPNVVIFST 283
Query: 238 VL-------KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
V+ K + + V + R G + N +TYN ++ + + V +
Sbjct: 284 VVDALCKEGKVMEAHDVVDMMIKR------GVEPNVVTYNALMDGHCLRSEMDEAVKVFD 337
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M +G+ D+ +Y + + K + +E A+ LFE M P+ S L+ + +
Sbjct: 338 TMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVG 397
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
L + ++ + G Y + L K R DEA ++KA++ + +PD
Sbjct: 398 R--LQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQI 455
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ VI G+C+AG E A ++ + G P++ T+TI+I G C + A F +M
Sbjct: 456 YTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMK 515
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
K Y + +++ GFL +LL EM+ +
Sbjct: 516 RKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLAR 552
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ ++L+ S + LG F V K LG+ + + ++ + R L G+ E
Sbjct: 101 PNIYTLNILINSFCHLQR--LGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVL 158
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF+P+ +TY +I GLCK G A +L ME+ C PD+ +T +I
Sbjct: 159 HLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL 218
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V +A F++M+ + + LI+ + LL EM+ ++ P
Sbjct: 219 CKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNS-KIMPN 277
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L ++ EA +++ +M K+ P
Sbjct: 278 VVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEP 311
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 1/174 (0%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S ++ H D+A M + P +++++ + K + ++ +
Sbjct: 34 SSHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQ 93
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M+ G P+I T ILI C + A AK+++ + + + LI G + +
Sbjct: 94 MDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGK 153
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ L +MI + +P T+ TLI L A+ LLR M++ N P
Sbjct: 154 IGEVLHLFDKMIGE-GFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQP 206
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 79/197 (40%), Gaps = 22/197 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TY+ ++ L ++D + EM G D +Y + K R +++A+ L
Sbjct: 382 NTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALL 441
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH---- 380
+ + P +Q ++++ + A + E+ + S G+H
Sbjct: 442 KAIEGSNMDPDIQIYTIVIDGMCR------------AGELEAARDLFSNLSSKGLHPNVW 489
Query: 381 ------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L + G EA K+ MK G+ P+ TY+ + G + +L EM
Sbjct: 490 TYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEM 549
Query: 435 EENGCIPDIKTWTILIQ 451
G D+ T T+L++
Sbjct: 550 LARGFSADVSTSTVLVE 566
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+KH+ T++ ++ L R +++ MK+E ++ D + I R + + D
Sbjct: 73 NGFKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLD 132
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++++F M D KP+ + +L + N L FR +G + + + +
Sbjct: 133 SIRVFHKMQDFHCKPTEKSYISVLAILVEENQ--LKSAFRFYRDMRKMGIPPTVTSLNVL 190
Query: 380 HRALTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+A K G D+A + + M N G EPD+ TY +I GLC+ +A +L EME G
Sbjct: 191 IKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKG 250
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+T +I G C N VD A+ M +KN + + L++GF + A
Sbjct: 251 CSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRAR 310
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
+L MI+K RLRP ++ TL+ L ++ EA+ + MK Q + P V
Sbjct: 311 DILELMIQK-RLRPNMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNC 369
Query: 556 ISKFGTVEDASEFL 569
+ ++A+ FL
Sbjct: 370 LCDVSRFQEAANFL 383
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 189/430 (43%), Gaps = 22/430 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-- 182
F+ +SLM+ L++ + + L RMKE+ + E+ LSI + K D
Sbjct: 75 FKHDLNTFSLMISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSI 134
Query: 183 --LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE---LSDNFVLT 237
+ FH ++ + +A + + L S + + + + M I S N ++
Sbjct: 135 RVFHKMQDFHCKPTEKSYISVLAILVEENQLKSAF--RFYRDMRKMGIPPTVTSLNVLIK 192
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ KA+ FR + H G + ++ TY ++ L R S+ + +++EM+ +G
Sbjct: 193 AFCKNSGTMDKAMHLFRTMSNH-GCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGC 251
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL- 356
+ TY I + +++A++L E M D +P+V S L+ +
Sbjct: 252 SPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARD 311
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+ + + N +S Y + L G+ +EA ++ MK GF+PD Y +++
Sbjct: 312 ILELMIQKRLRPNMIS---YSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVN 368
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTI-------LIQGHCAANEVDRALLCFAKM 469
LC RF++A N LDEM G P+ TW++ +I G C N +RA + +
Sbjct: 369 CLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSV 428
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + D + L+ F ++K + ++L EM+ + P + T++ R+
Sbjct: 429 LTRGISITVDTFNSLLKCFCNKKDLPKTSRILDEMVINGCI-PQGEMWSTMVNCFCDERK 487
Query: 530 LEEAMNLLRL 539
+AM LL+L
Sbjct: 488 ACDAMKLLQL 497
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 175/390 (44%), Gaps = 17/390 (4%)
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
V+ + + +I L+ + + +S V VLK L + AL FFRW G++++ +
Sbjct: 98 VVSAQPEHRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGF 157
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
+ ++ L + + R W++VE M+ + DT+ I R++ + R +++AV+ FE M
Sbjct: 158 HNLIEALGKIKQFRLVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKEAVETFEKMSS 216
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
K + D + L+ +S +V + K + + T L
Sbjct: 217 FGLKTDLSDYNWLIDILSKSK--------QVKKAHAIFKEMKRKGRFIPDLKTYTVLMEG 268
Query: 390 DEAEK---MMKA----MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
EK M+KA M +AG +PD + Y +I CK+G+ ++A V EMEE+GC+P
Sbjct: 269 WGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPS 328
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +LI G + +D AL F E + + + +I + + A+K++
Sbjct: 329 PHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVD 388
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
EM K + P T+ ++ L+ + ++EEA NL + M++ P + + F +
Sbjct: 389 EM-RKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSN 447
Query: 563 EDASEFLKALSVKEYPSSAAYLQVFESFFN 592
E LK + + +F + N
Sbjct: 448 ERVDMALKVWKQMKEKGVLPCMHMFSALIN 477
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 199/461 (43%), Gaps = 40/461 (8%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L+ L ++ + V VL+ L N A AFF W ++ FR S+ + ++ L
Sbjct: 111 LDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFRYSAEGFHNLIEALGKIKQF 170
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT 205
+ W + M+ C + ++T+ I+ +A+K + A+ F M +
Sbjct: 171 RLVWSLVEAMRCRSC-LSKDTFKIIVRRYARARKVKE--AVETFEK-------MSSFG-- 218
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+K +LSD N+++ +L + + KA F+ + +
Sbjct: 219 --------------------LKTDLSDYNWLIDILSKSKQVK-KAHAIFKEMKRKGRFIP 257
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TY ++ + + V +EM G + D+ Y + F K ++A+K+F
Sbjct: 258 DLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVF 317
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + PS +L+ + S+ D L + +K ES G + + + A
Sbjct: 318 HEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSK-ES-GFPMEVPTCNAVIGAYC 375
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ F A KM+ M+ +G P+ TY ++ L K+ + E+A N+ ME +GC P++
Sbjct: 376 RALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELN 435
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T+++ C+ VD AL + +M EK + LING + R+ A EM
Sbjct: 436 TYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEM 495
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRL---EEAMNLLRLMKK 542
++K +RP F L E L+ R+ +E L ++++
Sbjct: 496 LDK-GIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRR 535
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/316 (29%), Positives = 154/316 (48%), Gaps = 8/316 (2%)
Query: 255 WVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+VG E SG K N +TYN I+ V ++ MK++ E D TY +
Sbjct: 243 FVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMC 302
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K +E+A K+FE M+ +PS + L+ + N D+ ++ ++ G S +
Sbjct: 303 KQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYK--DEMLKKGISPT 360
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
S Y+ + AL R DEAE M+K ++ G PD ITY+ +I G C+ + A + D
Sbjct: 361 MSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHD 420
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM +G P KT+T L+ N + A F K+ + D + + LI+G S
Sbjct: 421 EMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNS 480
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
V GA++LL +M +++++ P + TF T+++ ++EEA L MK++ P F
Sbjct: 481 NVKGAFELLKDM-DRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539
Query: 553 VQYISKF---GTVEDA 565
IS + G ++DA
Sbjct: 540 NTLISGYSRRGDIKDA 555
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 138/294 (46%), Gaps = 11/294 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
++A + F M + P+++ C+ LL +N + V E + SVY
Sbjct: 168 DEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA----EMFRLRIKSSVYT 223
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + L K G+ +A+ + M+ +G +P+ +TY+ ++ G C +GR E A +L M+
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMK 283
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
PD T+ LI G C ++ A F +M++K A + + LI+GF ++ ++
Sbjct: 284 RQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLD 343
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A EM++K + P +T+ +LI L +R +EA +++ ++++ P +
Sbjct: 344 MASAYKDEMLKK-GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 556 ISKFGTVEDASE-FL---KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I+ + +A + FL + L+ P+ Y + + R EA DL K
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + ITYN ++ R + + + + +EM G + TY + K M
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A LF+ + P V + L+ S N ++ F + + + + ++
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCS--NSNVKGAFELLKDMDRMKVPPDEVTFN 505
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + + G+ +EA ++ MK G +PD+I+++ +I G + G +DA V +EM +
Sbjct: 506 TIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDT 565
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
G P + T+ L+QG C E D A +M+ K D LI G
Sbjct: 566 GFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + + YN ++ ++ +EM K+G + TY + + ++A
Sbjct: 321 GLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEA 380
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + + + P ++L+ N F + ++ + G +K Y +
Sbjct: 381 ECMIKEIQEKGISPDAITYNILINGYCRCANAKKA--FLLHDEMLASGIKPTKKTYTSLL 438
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+K R EA+ + K + + G PD I ++ +I G C + A +L +M+
Sbjct: 439 HVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVP 498
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T+ ++QGHC +V+ A F +M + D + LI+G+ + + A+++
Sbjct: 499 PDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM++ P T+ L++ L + + A LL+ M + P
Sbjct: 559 RNEMLD-TGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTP 604
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 85/211 (40%), Gaps = 36/211 (17%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP------------------------- 406
S V+D + ++ + R DEA + MK G P
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209
Query: 407 ----------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
T++ +I LCK G+ + A + + ME +G P+I T+ ++ G+C++
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
V+ A M + + D+ LI+G Q R+ A K+ EM++K LRP
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQK-GLRPSAVI 328
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ TLI+ L+ A M K+ P
Sbjct: 329 YNTLIDGFCNKGNLDMASAYKDEMLKKGISP 359
>gi|302801478|ref|XP_002982495.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
gi|300149594|gb|EFJ16248.1| hypothetical protein SELMODRAFT_116601 [Selaginella moellendorffii]
Length = 448
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 16/288 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY ++ VL +H D V + M ++ ++D Y + + R ++ A +LF
Sbjct: 148 DGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVYTSLLAAHCRTRKLDGAYRLF 207
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ Y PS LLLR + N L + + + S G+ ++ Y +
Sbjct: 208 VEMIQRGYGPSASTYGLLLRCLC--NGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCC 265
Query: 385 KLGRFDEAEKMMK-------AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
GR EA+ + K A+ +AG Y+ +I GLC+A + E+A V M +
Sbjct: 266 MAGRITEAKVLFKEVLEGEKALLDAGI------YNVLIEGLCRASKVEEALEVTAGMVDK 319
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GCIP ++T+ LI G ANEVD+AL F M EK + + + I+G ++N A
Sbjct: 320 GCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEA 379
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
++ + +E+ + P T+ LI L GA R++EA L R M ++ Y
Sbjct: 380 HEFFQQSVERGCV-PDNVTYNALIRGLFGANRMDEAHRLYREMGERGY 426
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 4/265 (1%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G D D+Y + R K ++ A + M+ Y P V C LL+ +
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+G V + + ES G ++ Y+ I +AL G FD K G P + Y
Sbjct: 61 --VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAY 118
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
++ L K G+ +A V+ EM + +PD T+T LI C N D A+ F M+E
Sbjct: 119 KTMLDCLIKTGKTREASEVVGEMIKKS-VPDGMTYTALISVLCKHNRADDAMKVFDIMVE 177
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + D+ L+ ++++GAY+L VEMI++ P +T+ L+ L R
Sbjct: 178 KEIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQR-GYGPSASTYGLLLRCLCNGGRSY 236
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYI 556
A ++ M+ + + P + I
Sbjct: 237 LAYDIHSSMRSRGHVPDENTYASLI 261
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 170/406 (41%), Gaps = 50/406 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+YN ++R L + SV ++ M EGY+ D+ T + +F + + + + +LF+ +
Sbjct: 12 SYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKRVGEVCELFQEL 71
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFR-VANKYESLGNSLSKSVYDGIHRALTKL 386
+ + +L+++ + D G F +A SL + L+ Y + L K
Sbjct: 72 ESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLA---YKTMLDCLIKT 128
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA +++ M PD +TY+ +I LCK R +DA V D M E +P++ +
Sbjct: 129 GKTREASEVVGEMIKKSV-PDGMTYTALISVLCKHNRADDAMKVFDIMVEKEIVPNLDVY 187
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADAD----LLDVLINGFLS------------ 490
T L+ HC ++D A F +M+++ Y A LL L NG S
Sbjct: 188 TSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRS 247
Query: 491 -------------------QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
R+ A L E++E + + LIE L A ++E
Sbjct: 248 RGHVPDENTYASLIYGCCMAGRITEAKVLFKEVLEGEKALLDAGIYNVLIEGLCRASKVE 307
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVF 587
EA+ + M + P + + I F V+ A + + + K + P++ Y
Sbjct: 308 EALEVTAGMVDKGCIPTLQTYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFI 367
Query: 588 ESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAKSNK 627
+ G+ EA + + P ++ ++ I LFG+ + ++
Sbjct: 368 DGLCKVGKINEAHEFFQQSVERGCVPDNVTYNALIRGLFGANRMDE 413
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 13/226 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + TY +LR L +++ M+ G+ D +TY + + +A
Sbjct: 214 GYGPSASTYGLLLRCLCNGGRSYLAYDIHSSMRSRGHVPDENTYASLIYGCCMAGRITEA 273
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
LF+ +++G +LL I ++ L +V E + K
Sbjct: 274 KVLFKEVLEGEK-------ALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQ 326
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + K D+A ++ + M+ GF P+ + YS I GLCK G+ +A +
Sbjct: 327 TYNALIMGFFKANEVDKALQLFRVMEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQS 386
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
E GC+PD T+ LI+G AN +D A + +M E+ Y AD L
Sbjct: 387 VERGCVPDNVTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSL 432
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
E ++ E +D Y + + +E+A+++ M+D P++Q + L+
Sbjct: 279 EVLEGEKALLDAGIYNVLIEGLCRASKVEEALEVTAGMVDKGCIPTLQTYNALIMGFFKA 338
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N D L +FRV E G S + +Y L K+G+ +EA + + G PDN
Sbjct: 339 NEVDKALQLFRV---MEEKGFSPNTMIYSTFIDGLCKVGKINEAHEFFQQSVERGCVPDN 395
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
+TY+ +I GL A R ++A + EM E G I D T+ Q
Sbjct: 396 VTYNALIRGLFGANRMDEAHRLYREMGERGYIADRSLRTLAFQ 438
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/273 (21%), Positives = 109/273 (39%), Gaps = 44/273 (16%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC---- 454
M G PD +Y+ ++ GL K + A +L M G PD+ T +L+ C
Sbjct: 1 MLEDGVVPDRDSYNLLVRGLTKLSSVDQARAMLSTMVGEGYDPDVVTCGLLVDKFCEMKR 60
Query: 455 -----------AANEVDRALLCF-----AKMMEKNYD----------ADADLLDVL---- 484
+N V +L + A M ++D D L VL
Sbjct: 61 VGEVCELFQELESNGVAVGMLAYNAILKALMCSGDFDGGFKFSDIAVGDGSLPHVLAYKT 120
Query: 485 -INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
++ + + A +++ EMI+K P T+ LI L R ++AM + +M ++
Sbjct: 121 MLDCLIKTGKTREASEVVGEMIKKS--VPDGMTYTALISVLCKHNRADDAMKVFDIMVEK 178
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + + ++ + ++ A + + Y PS++ Y + N GR Y A
Sbjct: 179 EIVPNLDVYTSLLAAHCRTRKLDGAYRLFVEMIQRGYGPSASTYGLLLRCLCNGGRSYLA 238
Query: 600 KDL---LYKCPHHIRQDSKISLLFGSAKSNKVT 629
D+ + H +++ SL++G + ++T
Sbjct: 239 YDIHSSMRSRGHVPDENTYASLIYGCCMAGRIT 271
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 226/511 (44%), Gaps = 39/511 (7%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
+ +W+ D+ +P + Y+ ML LV+ +SLK ++ +M + T+ ++
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 174 LKKAKK----------------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDWD 216
L +A + D G ++E +D + +V G W
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 217 DKIGKKLEDMKIELSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
+ +S N ++ KE R+ AL F + + G+ + T+N ++
Sbjct: 259 N------------VSVNVIVHGFCKEGRVE--DALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + V+ +++ M +EGY+ D+ TY + K +++AV++ + M+ P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ L+ ++ N + +A S G ++ + + L A ++
Sbjct: 365 TVTYNTLISTLCKENQVEEAT--ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M++ G EPD TY+ +I LC G+ ++A N+L +ME +GC + T+ LI G C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
AN+ A F +M ++ + LI+G +RV A +L+ +MI + + +P +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKY 541
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
T+ +L+ +++A ++++ M P + IS K G VE AS+ L+++
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 573 SVKEYP-SSAAYLQVFESFFNEGRHYEAKDL 602
+K + AY V + F + + EA +L
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 163/371 (43%), Gaps = 42/371 (11%)
Query: 238 VLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+L LR P AL F + + Y IL L R S D ++E+MK
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
EM T++ + + +F + ++ + + ++M+D L+ PD
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMID----------EFGLK-------PDTH 155
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ N GNSL KL A+ M G +PD T++ +I
Sbjct: 156 FYNRMLNLLVD-GNSL-------------KLVEISHAK-----MSVWGIKPDVSTFNVLI 196
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
LC+A + A +L++M G +PD KT+T ++QG+ ++D AL +M+E
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
++V+++GF + RV A + EM + P Q TF TL+ L A ++ A+
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 536 LLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
++ +M ++ Y P + IS K G V++A E L + ++ P++ Y + +
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 592 NEGRHYEAKDL 602
E + EA +L
Sbjct: 377 KENQVEEATEL 387
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L + V + + + +G D+ T+ + + R A++LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-----------------------VFRVA 361
E M +P ++L+ S+ S D L F A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 362 NK----------YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
NK E G S + Y+ + L K R ++A ++M M G +PD TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ C+ G + A +++ M NGC PDI T+ LI G C A V+ A +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL-GARRL 530
K + + +I G +++ A L EM+E+ P +++ + L G +
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 531 EEAMN-LLRLMKKQNYPPF 548
EA++ L+ L++K P F
Sbjct: 664 REAVDFLVELLEKGFVPEF 682
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A K F P+ Y +++ L ++G F+D +L++M+ + C T+ ILI+ + A
Sbjct: 73 ASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY-AQF 131
Query: 458 EVDRALLCFAKMMEKNYDADAD------LLDVLINGFLSQKRVNGAY-KLLVEMIEKVRL 510
E+ +L M + D +L++L++G S K V ++ K+ V I
Sbjct: 132 ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGI----- 185
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
+P +TF LI+ L A +L A+ +L M P + F + G +E+ +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ--GYIEEG-DLDG 242
Query: 571 ALSVKEYP-------SSAAYLQVFESFFNEGRHYEAKDLL 603
AL ++E S+ + + F EGR +A + +
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 111/514 (21%), Positives = 214/514 (41%), Gaps = 38/514 (7%)
Query: 97 SVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK 156
+ ++LR + PEK + +Q P + R ++ W+
Sbjct: 9 AAAHLLRSARSCPEKHARM-----ALEQMTPPPAAFPCRARAHHLLGGMRGQWLCTAAGP 63
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN----VAKTLVDV--- 209
Y+ + + ++ V S A L HD +A+D V +DV
Sbjct: 64 TGAQYLSVDQHFTV--VPGPGPDVSKAAGLTGAHD-----LAVDQDFTVVPGPGLDVSEE 116
Query: 210 ------VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
VL + + ++ L+ + +S V VLK L + AL FFRW G+
Sbjct: 117 AERVCRVLSTLPEPRVPAALDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFV 176
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +++ ++ L + + R W++VE M+ G + DT+ I R++ + R +++AV+
Sbjct: 177 YTADSFHNLIEALGKIKQFRLVWSLVEAMRCRGL-LSKDTFRLIVRRYARARKVKEAVET 235
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
FE M K + D + L+ +S V + ++ + + + V D +
Sbjct: 236 FEKMAGFGLKADLSDYNWLIDVLSKSKQ-----VKKAHAIFKEMKRN-GRFVPDLKTYTV 289
Query: 384 TKLGRFDEAEKMM-----KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
G E + +M + M +AG +PD + Y +I CK+G+ ++A V EME NG
Sbjct: 290 LMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNG 349
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C+P + +LI G + +D AL F + + + ++ + + A+
Sbjct: 350 CMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAF 409
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
K++ EM K + P T+ ++ L+ ++++EEA N+ + M K P + +
Sbjct: 410 KMVDEM-RKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTMMVGM 468
Query: 559 FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
F + E LK + + + +F + N
Sbjct: 469 FCSNERVDVALKVWNQMKEKGVLPCMHMFSALIN 502
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 189/452 (41%), Gaps = 37/452 (8%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L+ L ++ + V VL+ L N A AFF W ++ F ++ + ++ L
Sbjct: 136 LDALGASVSPQLVAEVLKNLSNAGILALAFFRWAERQQGFVYTADSFHNLIEALGKIKQF 195
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT 205
+ W + M+ + ++T+ I+ +A+K + + G
Sbjct: 196 RLVWSLVEAMR-CRGLLSKDTFRLIVRRYARARKVKEAVETFEKMAGF------------ 242
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
+K +LSD N+++ VL + + KA F+ + + +
Sbjct: 243 -------------------GLKADLSDYNWLIDVLSKSKQVK-KAHAIFKEMKRNGRFVP 282
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TY ++ + + +V +EM G + D+ Y + F K ++A+K+F
Sbjct: 283 DLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVF 342
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M PS +L+ + S D L + +K + G + + + A
Sbjct: 343 REMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSK--ASGFPMEVPTCNAVVGAYC 400
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ +F A KM+ M+ +G P++ TY ++ L K+ + E+A NV M ++GC P +
Sbjct: 401 RSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLN 460
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T+++ C+ VD AL + +M EK + LING + R+ A EM
Sbjct: 461 TYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEM 520
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+++ +RP F L E L+ R+ A +
Sbjct: 521 LDR-GIRPPGQLFSNLKEALIEGGRISLAQEM 551
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 181/383 (47%), Gaps = 13/383 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ I LS + V+ VL+ R A FF W E G+ H++ TY+ ++ +LA+
Sbjct: 97 LDECGINLSHDLVIEVLERFRHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQF 156
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+++EEM E + +DT+ R F + + AV +FE M + Y+ V+ + L
Sbjct: 157 ETMMSMLEEMG-EKRLLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINAL 215
Query: 343 LRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ + + L ++ ++ + + Y + ++ EA ++ M
Sbjct: 216 LDSLGRAKLGKEAQALFGKLEGRF-----TPNLRTYTVLLNGWCRVKNLMEAGRIWNEML 270
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF+PD +T++ ++ GL ++ + DA + M+ G PD++++TILI+ C ++
Sbjct: 271 DEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMK 330
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M++ DA + L+ G+ + KR++ Y+LL EM EK P T+ L
Sbjct: 331 EAVGYFYEMVDSGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEK-GCPPDGKTYNAL 389
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEY 577
I+ + R ++A+ + + M + P + + + + E +S K +
Sbjct: 390 IKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGF 449
Query: 578 -PSSAAYLQVFESFFNEGRHYEA 599
P +Y ++GR EA
Sbjct: 450 CPDDNSYTVFIGGLISQGRSEEA 472
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 173/430 (40%), Gaps = 44/430 (10%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E L+E L+H+ V+ VL + + + A FF W +K F S Y M+ L
Sbjct: 93 MEAVLDECGINLSHDLVIEVLERFRHARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAK 152
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSI--LGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ L M E + +++ K+ KKA + L + H
Sbjct: 153 ARQFETMMSMLEEMGEKRLLTLDTFSIAMRAFAAAKERKKAVGIFELMKNHKY------- 205
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
V ++ +L S K+GK+ + + +L F LR Y
Sbjct: 206 -RVGVETINALLDSLGRAKLGKEAQALFGKLEGRFT----PNLRTY-------------- 246
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
T+ NG RV E+ R WN EM EG++ DI T+ + + + D
Sbjct: 247 ------TVLLNGWCRVKNLMEAGR-IWN---EMLDEGFKPDIVTHNIMLEGLLRSKKRSD 296
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYD 377
A+K FE M P V+ ++L+R + +G + + + G +VY
Sbjct: 297 AIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDS----GCHPDAAVYT 352
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ R D +++K MK G PD TY+ +I + +DA + +M +N
Sbjct: 353 CLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQN 412
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P I ++ ++++ + + + +M +K + D + V I G +SQ R A
Sbjct: 413 GIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEA 472
Query: 498 YKLLVEMIEK 507
K L EMIEK
Sbjct: 473 CKYLEEMIEK 482
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 89/177 (50%), Gaps = 5/177 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+G+F + + SG + Y ++ H+ + + +++EMK++G D TY +
Sbjct: 331 EAVGYFYEMVD-SGCHPDAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNAL 389
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYES 366
+ RM +DAV++++ M+ +PS+ +++++S I N ++G V+ +K
Sbjct: 390 IKLMTSQRMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGF 449
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ S +V+ G L GR +EA K ++ M G + + Y++ +AG+
Sbjct: 450 CPDDNSYTVFIG---GLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGK 503
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++H+ T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFQHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKKGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M N G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRFMMAKRYFNKMLNEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ LI G+ +++ A F +M +N + LI G+
Sbjct: 171 XFFEDMKSRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ A L+ EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDRVDDALSLMEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ ++ +A +LL
Sbjct: 290 DNSIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
E+MK D+ TY + + + + ME+A + F M +P+V + L++ S+
Sbjct: 174 EDMKSRDITPDVITYNTLINGYYRVKKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSV 233
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP-DN 408
+ D L + + + G + Y + L + EA+ ++K M + P DN
Sbjct: 234 DRVDDAL--SLMEEMKGFGIKPNAITYSTLLPGLCNAEKMSEAQSILKEMVDKYIAPTDN 291
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ ++I G CKAG + A +VL M + + +LI+ +C A + D+A+ K
Sbjct: 292 SIFLKLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDK 351
Query: 469 MMEKN 473
++EK+
Sbjct: 352 LIEKD 356
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 156/336 (46%), Gaps = 7/336 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N I+YN I+ L R S+++ W ++EEM +G+ D TY + + K A
Sbjct: 75 GMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQA 134
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ PSV + L+ S+ N + + F ++ G ++ Y +
Sbjct: 135 LVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEF--FDQMRIRGLRPNERTYTTLI 192
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
++ G +EA +++ M +GF P +TY+ I G C R E+A V+ EM E G
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 252
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ +++ +I G C E+DRA +M+EK DA LI G +R+ A L
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 312
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM++ + L P + T+ TLI L +A++L M + + P + + ++
Sbjct: 313 SQEMLD-MGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 371
Query: 558 KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFN 592
K +A L L +E PS Y + E+ N
Sbjct: 372 KQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSN 407
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 126/267 (47%), Gaps = 11/267 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +TY ++ + + ++ ++M+ G + TY + F + ++ +
Sbjct: 144 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 203
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV-- 375
A ++ M + + PSV + + + + LG+V + K L+ V
Sbjct: 204 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK------GLAPDVVS 257
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I + G D A +M + M G PD +TYS +I GLC+ R +AC++ EM
Sbjct: 258 YSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEML 317
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD T+T LI +C ++++AL +M+ K + DA VLING Q R
Sbjct: 318 DMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTR 377
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIE 522
A +LL ++I + + P T+ TLIE
Sbjct: 378 EAKRLLFKLIYEESV-PSDVTYDTLIE 403
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/307 (26%), Positives = 134/307 (43%), Gaps = 7/307 (2%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
++ TY + R F ++ + F M P+V + L+ + + D F
Sbjct: 9 NVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDE--AFG 66
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ S G + Y+ I L + G EA ++++ M GF PD +TY+ ++ G C
Sbjct: 67 LLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYC 126
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K G F A + EM NG P + T+T LI C A ++RA+ F +M + +
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
LI+GF Q +N AY++L EM E P T+ I R+EEA+ +++
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQE 245
Query: 540 MKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
M ++ P + IS F G ++ A + + + K P + Y + + R
Sbjct: 246 MVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRR 305
Query: 596 HYEAKDL 602
EA DL
Sbjct: 306 LTEACDL 312
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 127/289 (43%), Gaps = 4/289 (1%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ G+ + +TYN +L + + + EM + G + TY + K R +
Sbjct: 108 YKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLN 167
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A++ F+ M +P+ + + L+ S L +R+ N+ G S S Y+
Sbjct: 168 RAMEFFDQMRIRGLRPNERTYTTLIDGFS--RQGLLNEAYRILNEMTESGFSPSVVTYNA 225
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L R +EA +++ M G PD ++YS +I G C+ G + A + EM E G
Sbjct: 226 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 285
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD T++ LIQG C + A +M++ D LIN + + +N A
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYP 546
L EMI K L P T+ LI L R EA LL +L+ +++ P
Sbjct: 346 HLHDEMIHKGFL-PDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVP 393
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 5/202 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ TY+ +I G C G + EME NGC+P++ T+ LI +C +D A
Sbjct: 8 PNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGL 67
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
M K + +V+ING + + A+++L EM K P + T+ TL+
Sbjct: 68 LKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNGYC 126
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSA 581
+A+ + M + P + I+ K + A EF + ++ P+
Sbjct: 127 KEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNER 186
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + + F +G EA +L
Sbjct: 187 TYTTLIDGFSRQGLLNEAYRIL 208
>gi|302761606|ref|XP_002964225.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
gi|300167954|gb|EFJ34558.1| hypothetical protein SELMODRAFT_81759 [Selaginella moellendorffii]
Length = 580
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 210/501 (41%), Gaps = 59/501 (11%)
Query: 101 VLRKLDNDPEKASAFFNWVC--DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKED 158
+++ L NDP A F+ W ++ ++ S +Y+ ++RNL L L M +
Sbjct: 1 MVKGLRNDPGTALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQ 60
Query: 159 HCYIEEETYLSILGVLKKAKKASDLAAL-NQF-HDGMVKEIAMDNVAKTLVDVVLGS--- 213
C +E E L ++ A+ N+ H G + +V+ G+
Sbjct: 61 GCSLEPEAALDLVVCYANGAMVDRAQAIFNELRHQG-------QEFPAHIYNVIFGALAK 113
Query: 214 --DWDDKIGKKLEDMKIELSDNFVL---TVLKELRIYPV-----KALGFFRWVGEHS-GY 262
+ D + + +ED+ ++ NF T +RI+ KA+ F +W+
Sbjct: 114 LQRFQD-VFRMVEDL---MAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQV 169
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+T YN ++ L + + + + + E M+ DI TY + K M+E A K
Sbjct: 170 AMSTFEYNCLIEGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEK 229
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ + M + KP + ++ + N +V + + + G + V+D I
Sbjct: 230 VLKTMEESDCKPDKFIYTRVINGFCKLGNFKNAVV--LLGRMKEAGYAPDAVVFDCIIGG 287
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITY----------------SQVIFGLCKAGRFED 426
L K +FDEA ++K AG EPD +TY S+++ LCK G+ E
Sbjct: 288 LCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATNLLYSRLMKCLCKTGKVEA 347
Query: 427 ACNVLDEMEE-----------NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
AC +L+++ +GC PD+ ++I+I CA D + M E+
Sbjct: 348 ACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMGMTDEGFVVVKAMEERGVK 407
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
DA + + + F R++ A +LL EM+ + P ++ TL+ L A + EEA
Sbjct: 408 PDAVVYTIFLYAFCRSARLDDACRLL-EMMVEAGCYPDVISYNTLLFALCSAGQEEEACR 466
Query: 536 LLRLMKKQNYPPFPEPFVQYI 556
L ++M + P + Q I
Sbjct: 467 LFQVMVETGIEPNVFTYTQLI 487
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 151/375 (40%), Gaps = 58/375 (15%)
Query: 238 VLKELRIYPVKALGFFRWVGEH--SGYKHNTITYNGILRVLARHESVRDFWNVVEEM--- 292
++K LR P AL F+RW G+ S YKH++ YN ++R LA + + D +V+ EM
Sbjct: 1 MVKGLRNDPGTALFFYRWAGKQNRSSYKHDSRIYNQVVRNLAAAKRLSDIDSVLGEMMDQ 60
Query: 293 --------------------------------KKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+ +G E Y I K + +D
Sbjct: 61 GCSLEPEAALDLVVCYANGAMVDRAQAIFNELRHQGQEFPAHIYNVIFGALAKLQRFQDV 120
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ E +M + S L+R D + F + L ++S Y+ +
Sbjct: 121 FRMVEDLMAKNFTFSDSTADALVRIFCKALAVDKAVRFLKWMSSKGLQVAMSTFEYNCLI 180
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R DEA ++ + M+ D TY+ +I + K G E A VL MEE+ C
Sbjct: 181 EGLCKGDRIDEALRLYELMRGNNVPADIFTYNNMIECISKLGMVEQAEKVLKTMEESDCK 240
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD +T +I G C A++ +M E Y DA + D +I G + + A +
Sbjct: 241 PDKFIYTRVINGFCKLGNFKNAVVLLGRMKEAGYAPDAVVFDCIIGGLCKTSKFDEALVV 300
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL--RLMKKQNYPPFPEPFVQYISK 558
L IE P + T+ L ++ R A NLL RLMK + K
Sbjct: 301 LKVSIE-AGCEPDEVTYFKLAQE-----RKCPATNLLYSRLMK-------------CLCK 341
Query: 559 FGTVEDASEFLKALS 573
G VE A + L+ L+
Sbjct: 342 TGKVEAACQLLEDLT 356
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ------- 310
+ +GY + + ++ I+ L + + V++ + G E D TY K++++
Sbjct: 270 KEAGYAPDAVVFDCIIGGLCKTSKFDEALVVLKVSIEAGCEPDEVTYFKLAQERKCPATN 329
Query: 311 ---------FQKFRMMEDAVKLFEFMMDGP-----------YKPSVQDCSLLLRSISSIN 350
K +E A +L E + +G KP V S+++ ++ ++
Sbjct: 330 LLYSRLMKCLCKTGKVEAACQLLEDLTNGSRESEQLLGGDGCKPDVVMYSIVIDALCAMG 389
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D G V V E G VY A + R D+A ++++ M AG PD I+
Sbjct: 390 MTDEGFV--VVKAMEERGVKPDAVVYTIFLYAFCRSARLDDACRLLEMMVEAGCYPDVIS 447
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++F LC AG+ E+AC + M E G P++ T+T LI+ C+ +++ A F M
Sbjct: 448 YNTLLFALCSAGQEEEACRLFQVMVETGIEPNVFTYTQLIRALCSTKKLEGARHLFNFMK 507
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D + LI G + V A +LL
Sbjct: 508 LSKCVPDMETYKALILGHYQNEGVREARQLL 538
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 186/437 (42%), Gaps = 76/437 (17%)
Query: 201 NVAKTLVDVVL-GSDWD-DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++ +T+ DV L GS W I L + ++ + V VL+ L++ A+ FFRW GE
Sbjct: 53 SIVETIKDVRLDGSSWSVHNIRNVLGPVHGQVLGSHVAAVLRSLKVTGT-AISFFRWAGE 111
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG---------------------- 296
+G++H+ TYN ++ +L ++ + + EEM K G
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171
Query: 297 -----YEM--------DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS-------- 335
+E+ D+ T++ + K M E A ++F MM + P
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231
Query: 336 ---------VQDCSLLLRSISSINNPDLGLVF--------RVANKYESL---GNSLSKSV 375
V++ + + P + + + + E+L N L+K+
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291
Query: 376 ------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
Y + +L K G + AE++ + M +GF P+++ Y+ +I G K+GR ++AC+
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ DEM E G PD+ T T++I G C + ++A F +MM + +I G
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP-- 547
RV A++++ MI P T+ L++ RL+EA LL + K + P
Sbjct: 412 KIGRVANAFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Query: 548 -FPEPFVQYISKFGTVE 563
V + G+VE
Sbjct: 471 QLYSSLVNGLCDGGSVE 487
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 130/574 (22%), Positives = 218/574 (37%), Gaps = 89/574 (15%)
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRR 154
H ++V L K E F +K F P + Y+ M+ L ++ L
Sbjct: 228 HTAMVRTLLKAKRVKEAREVFGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDN 285
Query: 155 MKEDHCYIEEETY------LSILGVLKKAKKASDLAALNQFH----------DGMVKEIA 198
M C E TY L G L++A++ + A + F G K
Sbjct: 286 MLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGR 345
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
M ++V D I + + S NF A F +
Sbjct: 346 MKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNF-----------EQAAKSFEEMM-- 392
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G K N +TY I++ L++ V + + +++ M G D TYI + F K ++
Sbjct: 393 RGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLD 452
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSV 375
+A +L + + P++Q S L+ + S+ L + E+L L S+
Sbjct: 453 EAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSI 512
Query: 376 YDGIHRALTKLGRFDEAEKMMKAM------------------------------------ 399
G L K GR DEA ++ + M
Sbjct: 513 IVG----LCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHD 568
Query: 400 -KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
+ G+ PD +TY+ + GLCK G + A +L+E G D+ +T L G C +
Sbjct: 569 LEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
VDRA+ F +M+ + DA +ING + K++ A K EMI K + +P AT+
Sbjct: 629 VDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQ-KPTVATYT 687
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQN--------YPPFPEPFVQYISKFGTVEDASE-FL 569
L++ L A ++EA + M + Y F + + V+ A + F
Sbjct: 688 ALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALK----VDAALKLFE 743
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+S P++ +F+ G+ +A++LL
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELL 777
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/515 (20%), Positives = 194/515 (37%), Gaps = 72/515 (13%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+ + S+++ K E S F V + +RP +++M+ L + +Q +
Sbjct: 331 VIYTSLIHGFAKSGRMKEACSLFDEMV--EAGYRPDVITHTVMIDGLCKSGNFEQAAKSF 388
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M C TY +I+ L K + + N F ++K + V +
Sbjct: 389 EEMMRGGCKPNVVTYTTIIQGLSKIGRVA-----NAFR--IMKGMIAHGCFPDSVTYICL 441
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
D K+G+ E ++ L EL + N Y+ +
Sbjct: 442 LDGFCKLGRLDEAAQL----------LDEL---------------DKCSSSPNLQLYSSL 476
Query: 273 LRVLARHESV-RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+ L SV + ++ E+ K +D I K +++A ++F+ M+
Sbjct: 477 VNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG 536
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
KP ++L+ + + F + + E +G Y + L K+G D
Sbjct: 537 CKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDR 596
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAG----------------------------- 422
A KM++ + G+ D + Y+ + GLC G
Sbjct: 597 AVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIIN 656
Query: 423 ------RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
+ EDAC DEM G P + T+T L+Q C A VD A F M+ +
Sbjct: 657 GLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELV 716
Query: 477 DADLL-DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ ++ D LI+GF +V+ A KL +MI + + P T +L + L+ + + E+A
Sbjct: 717 GSVMIYDALIHGFCKALKVDAALKLFEDMISRGNV-PTAVTSASLFDGLVRSGKTEKAQE 775
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
LL+ M PP F + +++ + LK
Sbjct: 776 LLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLK 810
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 131/588 (22%), Positives = 228/588 (38%), Gaps = 97/588 (16%)
Query: 78 WS-DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
WS + N L + ++ V VLR L A +FF W ++ F+ Y+ ++
Sbjct: 68 WSVHNIRNVLGPVHGQVLGSHVAAVLRSL-KVTGTAISFFRWAGEQAGFQHDVFTYNCLM 126
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
LV + + Q + M + ++ ++ + ++A D A+ F K
Sbjct: 127 NLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADD--AVTCFEIMKRKR 184
Query: 197 IAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKI--------ELSDNFVLTVLKELRIYPV 247
D + LVD + + D+K + +M L V T+LK R+
Sbjct: 185 CKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEA 244
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ + F + E G+ + I YN ++ LA+ ++ V++ M + TY +
Sbjct: 245 REV-FGQM--EKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSIN 350
K +E A +LF M ++P+ + CSL + +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
PD+ ++ +V DG L K G F++A K + M G +P+ +
Sbjct: 362 RPDV----------------ITHTVMIDG----LCKSGNFEQAAKSFEEMMRGGCKPNVV 401
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL------ 463
TY+ +I GL K GR +A ++ M +GC PD T+ L+ G C +D A
Sbjct: 402 TYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDEL 461
Query: 464 ------------------LCFAKMMEKNYD-------ADADLLD-----VLINGFLSQKR 493
LC +EK D A A+ LD +I G R
Sbjct: 462 DKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGR 521
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR--RLEEAMNLLRLMKKQNYPPFP-- 549
++ A ++ M+ + +P T+ LI L +R R+E A LL ++K Y P
Sbjct: 522 LDEACRIFQRMVSE-GCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVT 580
Query: 550 -EPFVQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGR 595
P + K G V+ A + L+ S + + + AY + +G+
Sbjct: 581 YTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQ 628
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/286 (22%), Positives = 112/286 (39%), Gaps = 42/286 (14%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E GY + +TY + L + V ++EE G+ D+ Y + +
Sbjct: 570 EKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ AV LF+ M+ G + + Y
Sbjct: 630 DRAVSLFQEMV-------------------------------------RQGGAPDAAAYC 652
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L K+ + ++A K M G +P TY+ ++ LC AG ++A + + M
Sbjct: 653 CIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLAR 712
Query: 438 G-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + + LI G C A +VD AL F M+ + A L +G + +
Sbjct: 713 GELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK 772
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
A +LL EM P ATF +++ G R+ +E+ LL+L+++
Sbjct: 773 AQELLQEMAAGGS-PPHAATFTAILD---GLRKSDESGKLLKLVQE 814
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 15/318 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN I+ + R V D ++ + G++ D +Y + + + +D
Sbjct: 208 GCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDV 267
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
+LF MM+ P+ +L+R G+V R E + G + + ++ +
Sbjct: 268 EELFAEMMEKNCMPNEVTFDMLIRFFCRG-----GMVERAIQVLEQMTEHGCATNTTLCN 322
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ ++ K GR D+A K++ M + G PD I+Y+ V+ GLC+A R++DA +L+EM N
Sbjct: 323 IVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRN 382
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C P+ T+ I C +++A++ +M E + L+NGF Q ++ A
Sbjct: 383 NCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSA 442
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+E+ + +P T+ TL+ L A RL+ A L+ M + + PP F V
Sbjct: 443 ----LELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498
Query: 555 YISKFGTVEDASEFLKAL 572
+ + G +E+A E ++ +
Sbjct: 499 FFCQKGFLEEAIELVEQM 516
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 171/378 (45%), Gaps = 14/378 (3%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY + R
Sbjct: 102 AEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGR 158
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ L + M+ +P+V ++LL ++ N V ++ + G + + Y
Sbjct: 159 VADALSLLDDMLRRGCQPNVVTYTVLLEAMC--RNSGFEQAMAVLDEMRAKGCTPNIVTY 216
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D+A +++ + + GF+PD ++Y+ ++ GLC + R++D + EM E
Sbjct: 217 NVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME 276
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C+P+ T+ +LI+ C V+RA+ +M E + L +++IN Q RV+
Sbjct: 277 KNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDD 336
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A+KLL +M P ++ T+++ L A R ++A LL M + N PP F +I
Sbjct: 337 AFKLLNDM-GSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFI 395
Query: 557 SKF---GTVEDASEFLKALSVKEYPSSAA---YLQVFESFFNEGRHYEAKDLLYKCPHHI 610
G +E A ++ +S E+ + Y + F +G A +L P
Sbjct: 396 CILCQKGLIEQAIMLIEQMS--EHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKP 453
Query: 611 RQDSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 454 NTITYTTLLTGLCNAERL 471
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 105/497 (21%), Positives = 206/497 (41%), Gaps = 29/497 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
++ +P+ Y+++L + +Q L M+ C TY I+ G+ ++ +
Sbjct: 171 RRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 230
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKT--LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
LN+ + D V+ T L + WDD E M+ N V T
Sbjct: 231 DARELLNRLPSYGFQP---DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV-TF 286
Query: 239 LKELRIYPV-----KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+R + +A+ + EH G NT N ++ + + V D + ++ +M
Sbjct: 287 DMLIRFFCRGGMVERAIQVLEQMTEH-GCATNTTLCNIVINSICKQGRVDDAFKLLNDMG 345
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
G D +Y + + + +DA +L M+ P+ + + +
Sbjct: 346 SYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQ----- 400
Query: 354 LGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
GL+ + E + G ++ Y+ + G D A ++ ++M +P+ IT
Sbjct: 401 KGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTIT 457
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++ GLC A R + A ++ EM C P++ T+ +L+ C ++ A+ +MM
Sbjct: 458 YTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMM 517
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
E + + L++G A +LL ++ K + P TF ++I L R+
Sbjct: 518 EHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGILSKEDRI 576
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQY---ISKFGTVEDASEFLK-ALSVKEYPSSAAYLQV 586
EEA+ L +++ P + + + K +++A +F +S P+ + Y+ +
Sbjct: 577 EEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIIL 636
Query: 587 FESFFNEGRHYEAKDLL 603
E +EG EA+DLL
Sbjct: 637 IEGLAHEGLLKEAQDLL 653
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 8/204 (3%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD +++I LC+ GR DA VL E +G D+ + L+ G+C +D A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
M DA LI + RV A LL +M+ + +P T+ L+E
Sbjct: 131 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVVTYTVLLE 186
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-P 578
+ E+AM +L M+ + P + + + + G V+DA E L L + P
Sbjct: 187 AMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQP 246
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+ +Y + + R + ++L
Sbjct: 247 DTVSYTTLLKGLCASKRWDDVEEL 270
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 173/378 (45%), Gaps = 16/378 (4%)
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
+ F DG + + AK + +V + + +I L+ + + +S V VLK L
Sbjct: 89 DAFGDG--PPVGISEAAKMVCRIV-STQPEPRIASTLDALGVAMSPELVAEVLKNLSNAG 145
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ AL FFRW G+ + ++ ++ L + + + W++VE M+ G + DT+
Sbjct: 146 MLALAFFRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGL-LSKDTFKL 204
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
I R++ + R +++AV+ FE M K + D + L+ ++S V + Y+
Sbjct: 205 IVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQ-----VKKAQAIYKE 259
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMM-----KAMKNAGFEPDNITYSQVIFGLCKA 421
+ K V D + G E + +M + M +AG PD + Y +I CK+
Sbjct: 260 MKRK-GKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKS 318
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G+ ++A V EME +GC+P + +LI G + +D AL F + + + +
Sbjct: 319 GKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTC 378
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ ++ + + A+K++ EM E ++ P T+ ++ L+ +++ EEA N+ + M
Sbjct: 379 NAVVGAYCRASKFEHAFKMVDEMRE-CKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMG 437
Query: 542 KQNYPPFPEPFVQYISKF 559
P + + F
Sbjct: 438 MDGCEPQLNTYTMMVGMF 455
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 197/477 (41%), Gaps = 37/477 (7%)
Query: 73 ILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVY 132
I++ + + L+ L ++ E V VL+ L N A AFF W ++ F ++ +
Sbjct: 109 IVSTQPEPRIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSYTAEGF 168
Query: 133 SLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDG 192
++ L K W + M+ + ++T+ I+ +A+K
Sbjct: 169 HNLIEALGKIKQFKLVWSLVETMR-CRGLLSKDTFKLIVRRYARARK------------- 214
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALG 251
VKE A++ K + +K ELSD N+++ L + + KA
Sbjct: 215 -VKE-AVETFEKM----------------SIFGLKTELSDYNWLIDTLSKSKQVK-KAQA 255
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
++ + + + TY ++ + + + +EM G D+ Y + F
Sbjct: 256 IYKEMKRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAF 315
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ++A+K+F M PS +L+ + S D L + +Y+ G +
Sbjct: 316 CKSGKCDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEAL--KYFEQYKKSGFPM 373
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + A + +F+ A KM+ M+ P++ TY ++ L K+ +FE+A NV
Sbjct: 374 EVPTCNAVVGAYCRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVF 433
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M +GC P + T+T+++ C+ VD AL + +M E+ + LING +
Sbjct: 434 QRMGMDGCEPQLNTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFE 493
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
R+ A EM++K +RP F L E L+ R+ A + + PF
Sbjct: 494 NRLEEACVYFQEMLDK-GIRPPGQLFSNLKEALVEGGRISLAQEMASKLDAIRKTPF 549
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 46/214 (21%), Positives = 92/214 (42%), Gaps = 5/214 (2%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
FR A + E G S + + + AL K+ +F +++ M+ G + T+ ++
Sbjct: 152 FRWAERQE--GFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCRGLLSKD-TFKLIVRR 208
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDA 476
+A + ++A ++M G ++ + LI + +V +A + +M K +
Sbjct: 209 YARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVP 268
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D VL+ G+ +K + + EMI+ +RP + LI + + +EA+ +
Sbjct: 269 DLKTYTVLMEGWGHEKDLLMVKTMYQEMID-AGIRPDVVAYGMLISAFCKSGKCDEAIKV 327
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
M+ P P + I+ G+ E E LK
Sbjct: 328 FYEMEASGCMPSPHVYCMLINGLGSEERLDEALK 361
>gi|255660930|gb|ACU25634.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 484
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 164/354 (46%), Gaps = 42/354 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + +HN + I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLLEHNREIHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + +++ GR+ +++ M N G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVISRRGRYMMSKRYFNKMVNEGIEPTRHTFNVLIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M E+ D LI G+
Sbjct: 171 RFFEDMKSREITPDVITYNTMINGYNRVKKMEEAEKYFLEMKERKIDPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
S RV+ A +L+ EM + + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 ASVDRVDDALRLVEEM-KGLGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYVAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
F++ IS K G ++ A++ LKA+ P+ A + V ++ + Y+
Sbjct: 290 DNSIFMRLISSQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIEYYCKAGQYD 343
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 101/383 (26%), Positives = 184/383 (48%), Gaps = 13/383 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ I LS + V+ VL+ A FF W GE G++H++ TYN ++ +LA+
Sbjct: 86 LDECGINLSHDLVIDVLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQF 145
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+++EEM +G + +DT+ R F + + AV +FE M YK V+ + L
Sbjct: 146 ETVVSMLEEMGGKGV-LTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHL 204
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG + +E+L + ++ Y + K+ EA + M
Sbjct: 205 L---DSLGRAKLGKEAQAL--FENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMI 259
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF+PD + ++ ++ GL ++ + DA + M+ G PD++++TILI+ C ++++
Sbjct: 260 DKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKME 319
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M++ DA + LI GF ++KR++ Y LL EM E+ P T+ L
Sbjct: 320 EAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEE-GCPPDGLTYNAL 378
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI-SKFGT--VEDASEFLKALSVKEY 577
I+ + + ++A + + M + P + + S F T E +S K +
Sbjct: 379 IKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGF 438
Query: 578 -PSSAAYLQVFESFFNEGRHYEA 599
P +Y + ++GR EA
Sbjct: 439 CPDDNSYTVLIGGLISQGRSGEA 461
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 189/452 (41%), Gaps = 37/452 (8%)
Query: 45 NQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDEL-------ENKLEELSPKLTHES 97
N+ + + N +KI S P +E+ C DEL E L+E L+H+
Sbjct: 41 NEDNKCESGNNDGEKINSSADP---VEVDRVCKVIDELFALDRNMEAVLDECGINLSHDL 97
Query: 98 VVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
V+ VL + + + A FF W +K+ F S Y+ M+ L +QF + ++E
Sbjct: 98 VIDVLERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKT---RQFETVVSMLEE 154
Query: 158 --DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDW 215
+ +T+ + AK+ A+ + ++ ++ + + +L S
Sbjct: 155 MGGKGVLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETI-----NHLLDSLG 209
Query: 216 DDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW-----VGE------HSGYKH 264
K+GK+ + + L F LR Y V G+ + G G+K
Sbjct: 210 RAKLGKEAQALFENLKGRFT----PNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKP 265
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ + +N +L L R + D + MK +G D+ +Y + R + ME+AV+ F
Sbjct: 266 DIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYF 325
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+D KP + L+ N + +V+ + + + G Y+ + + +T
Sbjct: 326 QEMIDSGCKPDAAVYTCLITGFG--NRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMT 383
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+L D+A ++ K M +G EP TY+ ++ + +E V DEM G PD
Sbjct: 384 RLKMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDN 443
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
++T+LI G + A +M+EK A
Sbjct: 444 SYTVLIGGLISQGRSGEACKYLEEMLEKGMKA 475
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 170/378 (44%), Gaps = 14/378 (3%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + YN ++ R+ + ++ M D TY I R
Sbjct: 100 AEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGR 156
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ L + M+ +PSV ++LL ++ + G V ++ + G + + Y
Sbjct: 157 VGDALALLDDMLQRGCQPSVVTYTVLLEAVC--KSSGFGEAMNVLDEMRAKGCTPNIVTY 214
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D+A++++ + + GF+PD ++Y+ V+ GLC A R++D + EM +
Sbjct: 215 NVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVD 274
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C+P+ T+ +L++ C V+RA+ +M + + L +++IN Q RV+
Sbjct: 275 KKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDD 334
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
AY L M P ++ T++ L A R E A LL M ++N PP F +I
Sbjct: 335 AYDFLNNM-GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFI 393
Query: 557 SKF---GTVEDASEFLKALSVKEYPSSAA---YLQVFESFFNEGRHYEAKDLLYKCPHHI 610
G +E A + ++ + EY S Y + F +GR A +L P
Sbjct: 394 CILCQKGLIEQAIKLIELM--PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEP 451
Query: 611 RQDSKISLLFGSAKSNKV 628
+ +LL G + ++
Sbjct: 452 NTITYTTLLTGLCHAERL 469
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 129/337 (38%), Gaps = 75/337 (22%)
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
I DL R+ S G + + + R L + GR +A ++++ + +G D
Sbjct: 50 IARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDV 109
Query: 409 ITYSQVIFGLCKAGRFE--------------------------------DACNVLDEMEE 436
Y+ ++ G C+ GR + DA +LD+M +
Sbjct: 110 FAYNTLVAGYCRYGRLDAARRLIASMPVPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQ 169
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC P + T+T+L++ C ++ A+ +M K + +V+ING + RV+
Sbjct: 170 RGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 229
Query: 497 AYKLL-----------------------------------VEMIEKVRLRPWQATFKTLI 521
A ++L EM++K + P + TF L+
Sbjct: 230 AKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDK-KCVPNEVTFDMLV 288
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY- 577
+E A+ +L+ M + P + I K G V+DA +FL + +
Sbjct: 289 RFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCN 348
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDS 614
P + +Y V GR AK+LL P +R++
Sbjct: 349 PDTISYTTVLRGLCRAGRWEHAKELL---PEMVRKNC 382
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 103/496 (20%), Positives = 198/496 (39%), Gaps = 27/496 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
++ +PS Y+++L + + L M+ C TY I+ G+ ++ +
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 228
Query: 181 SDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDK--IGKKLEDMKIELSD-NFVL 236
LN+ G +I + L + WDD + ++ D K ++ F +
Sbjct: 229 DAKEILNRLSSYGFQPDIV--SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 237 TVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
V R V +A+ + + +H G NT N ++ + + V D ++ + M
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQH-GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G D +Y + R + E A +L M+ P+ + + + G
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQ-----KG 400
Query: 356 LVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
L+ + E + G S+ Y+ + GR D A ++ N EP+ ITY+
Sbjct: 401 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYT 457
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ GLC A R + A +L M + C + T+ +L+ C V+ A+ +MME
Sbjct: 458 TLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 517
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLE 531
+ + L++G A +LL ++ K V L T+ ++++ L R E
Sbjct: 518 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD--TITYSSVVDVLSREDRTE 575
Query: 532 EAMNLLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVF 587
EA+ +L ++ P + + + T + F +S P+ + Y+ +
Sbjct: 576 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 635
Query: 588 ESFFNEGRHYEAKDLL 603
E +EG EA+ +L
Sbjct: 636 EGLAHEGLLKEARYVL 651
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 54/276 (19%), Positives = 110/276 (39%), Gaps = 36/276 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N + +L + + ++E M + G + I TY + F ++ A++LF
Sbjct: 385 NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELF 444
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDL------GLV--------------------- 357
+ P +P+ + LL + D G++
Sbjct: 445 NNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQK 501
Query: 358 ------FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+ N+ G + + ++ + +TK +EA +++ + + G D ITY
Sbjct: 502 GFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITY 561
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
S V+ L + R E+A +L +++ G P + + ++ C E D+A+ FA M+
Sbjct: 562 SSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVS 621
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +LI G + + A +L E+ K
Sbjct: 622 NGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAK 657
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 161/327 (49%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ + LS + V+ VL+ + A FF W G+ G+ H++ TYN ++ VL R
Sbjct: 195 LDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKRPGFAHDSRTYNFMMCVLGRTRQF 254
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
++EEM ++G + ++T+ + F + + + AV +F+ M +K V + L
Sbjct: 255 ETMVAMLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKAVGIFDLMKKYGFKVGVDVINFL 313
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+S+ LG + +E L + + S+ Y + +L EA ++ M
Sbjct: 314 LDSLSTAK---LGKEAQAV--FEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMI 368
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF PD + ++ ++ GL K + DA + + M+ G P+++++TI+IQ C +
Sbjct: 369 DRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMG 428
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M+++ DA L LI GF QK+++ Y LL EM E+ P T+ L
Sbjct: 429 EAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRER-GCPPDGRTYNAL 487
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + ++A+ + + M + P
Sbjct: 488 IKLMTSQHMPDDAVRIYKKMIQSGIKP 514
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 187/457 (40%), Gaps = 34/457 (7%)
Query: 70 LELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK 122
+E+ C DEL E L+E +L+H+ VV VL++ + + A FF W +
Sbjct: 172 VEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKR 231
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
F S Y+ M+ L + L M E + ET+ + +AK+
Sbjct: 232 PGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEKG-LLTMETFSIAIKAFAEAKQRKK 290
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+ ++ +D +++ +L S K+GK+ + + +L D F L
Sbjct: 291 AVGIFDLMKKYGFKVGVD-----VINFLLDSLSTAKLGKEAQAVFEKLKDRFT----PSL 341
Query: 243 RIYPVKALGFFRW-----VGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ Y + G+ R G G+ + + +N +L L + + D + E
Sbjct: 342 QTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEI 401
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
MK +G ++ +Y + + F K ++M +A++ F+ M+D +P + L+
Sbjct: 402 MKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKK 461
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
D+ V+ + + G Y+ + + +T D+A ++ K M +G +P TY
Sbjct: 462 MDM--VYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTY 519
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ +E + DEM + GC PD ++ + I G + A +M+E
Sbjct: 520 NMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLE 579
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
K A LD N F S G +L E+ K+
Sbjct: 580 KGMKAPK--LDY--NKFASDISKTGNAVILEELARKM 612
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 122 bits (305), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 159/349 (45%), Gaps = 37/349 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G K N TY ++ L ++ +M ++G ++ TY + + K M+
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-NPDLGLVFRVANKYESLGNSLSKSVY 376
EDAV + E M P+ + + L++ N + +G++ ++ + S+
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
DG R+ G FD A +++ M + G PD TY+ +I LCK+ R E+AC++ D +E+
Sbjct: 470 DGQCRS----GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ +T LI G+C A +VD A L KM+ KN ++ + LI+G + ++
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL E + K+ L+P +T LI +LL + A
Sbjct: 586 A-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY---------------------- 622
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
S F + LS P + Y +++ EGR +A+D++ K
Sbjct: 623 ---------SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 161/363 (44%), Gaps = 25/363 (6%)
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
L + P AL F W+ ++ YKH+ +Y +L +L + V + + M K +
Sbjct: 99 LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGD 158
Query: 302 DTYI-KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
Y+ + R+ K E KL + G Y + LL S++ GLV +
Sbjct: 159 ALYVLDLCRKMNKDERFELKYKL----IIGCY-------NTLLNSLAR-----FGLVDEM 202
Query: 361 ANKY-ESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
Y E L + + ++Y + + KLG +EA + + + AG +PD TY+ +I G
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
C+ + A V +EM GC + +T LI G C A +D A+ F KM +
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPT 322
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
VLI +R + A L+ EM E+ ++P T+ LI+ L + E+A LL
Sbjct: 323 VRTYTVLIKSLCGSERKSEALNLVKEM-EETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 538 RLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNE 593
M ++ P + I+ + G +EDA + ++ + S K P++ Y ++ + +
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 594 GRH 596
H
Sbjct: 442 NVH 444
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ R + + ++ M G D TY + K + +E+A LF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ + P+V + L+ D L+ L NSL+ ++ + L
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT---FNALIHGL 577
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G+ EA + + M G +P T + +I L K G F+ A + +M +G PD
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T IQ +C + A AKM E D LI G+ + N A+ +L
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M P Q TF +LI+ LL
Sbjct: 698 M-RDTGCEPSQHTFLSLIKHLL 718
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 123/281 (43%), Gaps = 20/281 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + TY ++ R + D +++ +M++ G D+ TY + + +
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSI-------NNPDLGLVFRVANKYESLGNSLS 372
A + + M D +PS L++ + + + P+L + + +++++ L
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM-EFDTVVELLE 749
Query: 373 KSV----------YDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKA 421
K V Y+ + + ++G AEK+ M +N G P + ++ ++ CK
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ +A V+D+M G +P +++ +LI G E +R F +++ Y D
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++I+G Q V Y+L ++EK + T+ LIE
Sbjct: 870 KIIIDGVGKQGLVEAFYELF-NVMEKNGCKFSSQTYSLLIE 909
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L + + V + ++ + ++++G ++ Y + + K +++A + E M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ P+ + L+ + + + L + K +G + S + L K G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCA--DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
FD A + M ++G +PD TY+ I C+ GR DA +++ +M ENG PD+ T++
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
LI+G+ + + A +M + + LI L K
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 170/363 (46%), Gaps = 43/363 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKAGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +++G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ +PD+ T+ ++ G+C +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREIMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ A + + EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDRVDDALRFVEEM-KGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A+ LKA+ P+ A + V E++ G + +A LL
Sbjct: 290 DNSIFMRLISGQCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLL 349
Query: 604 YKC 606
K
Sbjct: 350 DKV 352
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 113/484 (23%), Positives = 196/484 (40%), Gaps = 51/484 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ S+ +S+++ LV + Q + + C I+ TY +I+ L K KK
Sbjct: 217 RRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQ 276
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE--DMKIELSDNFVLTVL 239
+ AL +++I + T+ + K+G+ E D+ ++ DN
Sbjct: 277 EAVAL-------MEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDN------ 323
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
G + +TY ++ L + + + + + +EM G +
Sbjct: 324 ---------------------GCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLAL 362
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D Y + R + + A +++ M P V S ++ +S +G R
Sbjct: 363 DTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR--IGAAVR 420
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ E+ G + ++ VY + L K + D A +M+ MK A PD ITY+ +I GLC
Sbjct: 421 IFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 480
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K+G E A DEM E GC PD+ T+ ILI G C A D A M +
Sbjct: 481 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF----- 535
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ L++G ++ G L EM E+ + Q T LI L A R++EA++L
Sbjct: 536 VYSSLVDGLCKSGKLEGGCMLFHEM-ERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNA 593
Query: 540 MKKQNYP-PFP-EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGR-- 595
++K+ P P+ + + K G V + + ++ P Y + R
Sbjct: 594 IRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMD 653
Query: 596 --HY 597
HY
Sbjct: 654 RAHY 657
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 158/363 (43%), Gaps = 12/363 (3%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I L+ ++ E+S + V+ + + L+ + F G++H+ T N +L V AR
Sbjct: 72 IEAALDRLRREISTDAVVKIFQCLKDADLAWELFQCLSSPRFGFQHSVHTGNALLDVFAR 131
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQ 337
+ R+ N+++ + D++T+ + + R E+A + E D PS++
Sbjct: 132 TKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLK 191
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKM 395
+L+L + G V + +E++ S+ S + + + L K G +A +
Sbjct: 192 THNLVLHGLCKS-----GKVLAAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSL 246
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ G D TY+ ++ L K + ++A +++++ NGC P I T+ L+ G C
Sbjct: 247 AQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCK 306
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++ A+ K+++ D LI+G +KR AYKL EM + L
Sbjct: 307 MGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR-GLALDTV 365
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL 572
+ LI LL ++ +A ++ + M P + +SK G + A K++
Sbjct: 366 CYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM 425
Query: 573 SVK 575
+
Sbjct: 426 EAR 428
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/460 (22%), Positives = 179/460 (38%), Gaps = 78/460 (16%)
Query: 113 SAFFNWVCDKKQFR---------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
+A NW+ K+ + P+ Y+ +L L L++ LR++ +
Sbjct: 263 TAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 322
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD 217
+ C + TY S++ L K K++ A F + + +A+D V T + + G
Sbjct: 323 NGCTPDVVTYTSLIDGLGKEKRS--FEAYKLFKEMASRGLALDTVCYTAL--IRGLLQTG 378
Query: 218 KIGKKLEDMKIELSDNFVLTVL----------KELRIYPVKALGFFRWVGEHSGYKHNTI 267
KI + K S V V+ K RI A+ F+ + E G N +
Sbjct: 379 KIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG--AAVRIFKSM-EARGLAPNEV 435
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y+ ++ L + + ++ +MKK D TY + K +E A F+ M
Sbjct: 436 VYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEM 495
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ KP V ++L+ L K G
Sbjct: 496 LEAGCKPDVYTYNILI-------------------------------------SGLCKAG 518
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
D A ++ M ++ F YS ++ GLCK+G+ E C + EME +G + + +T T
Sbjct: 519 NTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEMERSG-VANSQTRT 572
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI C AN VD A+ F + K + +I+ + +VN + EM
Sbjct: 573 RLIFHLCKANRVDEAVSLF-NAIRKEGMPHPYAYNSIISALIKSGKVNEGQAVYQEMTR- 630
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+P + T+ L+ ++GA R++ A M + Y P
Sbjct: 631 -WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 171/363 (47%), Gaps = 43/363 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ M E LG
Sbjct: 88 DSYGKQGIVQESVKLFDRM-------------------------------------EELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ ++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMXEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ I+ K G ++ AS+ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLITSQCKSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLL 349
Query: 604 YKC 606
K
Sbjct: 350 DKV 352
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 166/364 (45%), Gaps = 11/364 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A R + G + +TY ++ L R + +V EMK +G E D T+ +
Sbjct: 63 RACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 122
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ R +++A+KL++ ++ + S L+ + +G + + + E
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLC--RERRIGEAYELFQEMEMR 180
Query: 368 GNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ K Y + K G ++A KM+ M+ P+ +TYS ++ GLCKAG
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ A ++ M GC+P++ T+T LI G CAA++VD A L +M AD + L
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK-KQ 543
++G+ R+ A +L EM K L P + T+ L+ A RLEEA LL MK
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMKTAA 359
Query: 544 NYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + ++ + + +A+EF++ + + P++ Y + + GR A
Sbjct: 360 GIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHA 419
Query: 600 KDLL 603
++L
Sbjct: 420 MEVL 423
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 138/326 (42%), Gaps = 30/326 (9%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T++YN +L R + + + +EM + D TY + R F +E+A L
Sbjct: 293 DTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLL 352
Query: 325 EFMMDGP-YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YD 377
E M P V S+++ S R E + ++++V Y
Sbjct: 353 ENMKTAAGIDPDVVTYSIVVAGYSRAK--------RFVEAAEFIQEMIARNVAPNAVTYS 404
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K GR + A M+ +KN +PD +TY+ VI GLC R E+A +L+EM
Sbjct: 405 SLIDGLCKAGRVNHA---MEVLKNVD-KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNK 460
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P + T+ +I C ++D A M + L+ GF R+ A
Sbjct: 461 RVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIA 520
Query: 498 YKLLVEMIEKVR-------LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
Y+L M K + L P QA F LI L AR +++AM ++ ++ + P E
Sbjct: 521 YELFEVMRRKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579
Query: 551 ---PFVQYISKFGTVEDASEFLKALS 573
V + + G E+A + + ++S
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLINSIS 605
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 5/181 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + +TY ++ L + + ++EEM + E + T+ + + M++A K
Sbjct: 428 KPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 487
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-----LVFRVANKYESLGNSLSKSVYD 377
L M +P + + LL S ++ ++ R A K S N + + +
Sbjct: 488 LLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFS 547
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ R L K D+A +++ +++ EP ++ GL +AGR E+A +++ + +
Sbjct: 548 ALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKV 607
Query: 438 G 438
G
Sbjct: 608 G 608
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 9/299 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE-MDIDTYIKISRQ 310
FF W + GY+H+ Y ++++L + W ++EEM++E + + ++ + R+
Sbjct: 141 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 200
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F RM++ A+++ + M +P LL ++ G V A+ +E +
Sbjct: 201 FASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKN-----GSVKEAASLFEDMRIR 255
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ ++ + + + G+ EA+ ++ ++ AGFEPD + Y+ ++ G AG+ DA
Sbjct: 256 FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAY 315
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L EM C P++ ++T LIQ CA +++ A+ F +M ADA LI+GF
Sbjct: 316 DLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGF 375
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++ Y+LL MI++ + P T+ ++ LEE + L+ M+K P
Sbjct: 376 CKWGKISKGYELLDNMIQQGHI-PNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 433
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 170/434 (39%), Gaps = 39/434 (8%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
VL + + FF W + +R S VY M++ L W + M+ ++
Sbjct: 127 VLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENP 186
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM--DNVAKTLVDVVLGSDWDDK 218
+L +++ A + + D M K ++V L+D + + +
Sbjct: 187 QFVSPYVFVVL--MRRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKE 244
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
EDM+I + KH + +L R
Sbjct: 245 AASLFEDMRIRFTPTL----------------------------KH----FTSLLYGWCR 272
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + V+ ++++ G+E DI Y + + M DA L + M +P+V
Sbjct: 273 EGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMS 332
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ L++++ + + + RV + +S G Y + K G+ + +++
Sbjct: 333 FTTLIQALCAKKKMEEAM--RVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDN 390
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P+ +TY ++ K E+ +++EM + GC PD+ + I+I+ C E
Sbjct: 391 MIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGE 450
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR-PWQATF 517
+ + + +M D ++I+GFLSQ+ + A + EM+ + L P T
Sbjct: 451 IKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTL 510
Query: 518 KTLIEKLLGARRLE 531
K L+ LL A +LE
Sbjct: 511 KELLNSLLRAEKLE 524
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 388 RFDEAEKMMKA------MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
RF A + KA M G EPD + ++ LCK G ++A ++ ++M P
Sbjct: 200 RFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTP 258
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+K +T L+ G C ++ A ++ E ++ D + + L+ G+ + ++ AY LL
Sbjct: 259 TLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLL 318
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---K 558
EM K P +F TLI+ L +++EEAM + M+ P + IS K
Sbjct: 319 KEMRRK-ECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 377
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
+G + E L + + + P+ YL + + +E K+ L +C + + KI
Sbjct: 378 WGKISKGYELLDNMIQQGHIPNPMTYLHIMAA-------HEKKEELEECIELMEEMRKIG 430
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 8/277 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + +TY ++ + + + +++ M ++G+ + TY+ I +K +
Sbjct: 357 QSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEEL 416
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+ ++L E M P + ++++R + G+ RV N+ E+ G S +
Sbjct: 417 EECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGV--RVWNEMEATGLSPGLDTFV 474
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ EA + K M G P T +++ L +A + E + +V +
Sbjct: 475 IMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIM 534
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC ++ WTI I + V A MM+ D L+ G +K N
Sbjct: 535 TKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGL--RKLYN 592
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
++ E+ EKVR + + K G R L+E
Sbjct: 593 --RQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKE 627
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 88/217 (40%), Gaps = 19/217 (8%)
Query: 251 GFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
GF +W GY+ N +TY I+ + E + + ++EEM+K G
Sbjct: 374 GFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 433
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D++ Y + R K +++ V+++ M P + +++ S LV
Sbjct: 434 DLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLS----QRCLVEA 489
Query: 360 VANKYESLGNS-LSKSVYDGIHRALTKLGRFDEAE---KMMKAMKNAGFEPDNITYSQVI 415
E +G LS Y + L L R ++ E + + G + + ++ I
Sbjct: 490 CEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWI 549
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
L G ++AC+ +M + G +P T+ L++G
Sbjct: 550 HALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRG 586
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 163/356 (45%), Gaps = 21/356 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + IT+N ++ L +++ + EM G+E ++ +Y + K A
Sbjct: 161 GIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMA 220
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK-YESLGNSLSKSV---- 375
V++F M KP+V + ++ S+ R+ N+ E L + + +
Sbjct: 221 VRVFRKMEQNRGKPNVVTYNTIIDSLCKD---------RLVNEAVEFLSEMVDRGIPPDV 271
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ I LG+ +EA ++ K M PD +T++ ++ GLCK G +A V +
Sbjct: 272 VTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSET 331
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M E G P+ T+ L+ G+C N++D A+ M+ K + ++LING+ KR
Sbjct: 332 MTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKR 391
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
+N A +LL EM EK L P T+ TL++ L R EA+NL + M P +
Sbjct: 392 MNEAKRLLSEMSEK-NLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYS 450
Query: 554 QYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ F G +++A + LK + + P+ Y + F G+ AK+L K
Sbjct: 451 ILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSK 506
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 162/380 (42%), Gaps = 44/380 (11%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ A+ FR + ++ G K N +TYN I+ L + V + + EM G D+ TY
Sbjct: 218 IMAVRVFRKMEQNRG-KPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNT 276
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL------------RSISSI----- 349
I F + +A +LF+ M+ P ++L+ R +S
Sbjct: 277 ILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKG 336
Query: 350 NNPDLGLVFRVANKY----------ESLGNSLSK------SVYDGIHRALTKLGRFDEAE 393
P+ + + Y + LG + K S Y+ + K R +EA+
Sbjct: 337 AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAK 396
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+++ M PD +TYS ++ GLC+ GR +A N+ EM +G +PD+ ++IL+ G
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR---L 510
C +D AL +M E+ + L +LI G + G ++ E+ K+ +
Sbjct: 457 CKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMF----IAGKLEVAKELFSKLSADGI 512
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS---E 567
RP T+ +I+ LL +EA R M+ + P + I F +D+S +
Sbjct: 513 RPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQ 572
Query: 568 FLKALSVKEYPSSAAYLQVF 587
+ + K + + ++ Q+
Sbjct: 573 LIDEMVGKRFSADSSTFQML 592
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 125/264 (47%), Gaps = 7/264 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ H + + V+ M +G ++ +Y + + K + M +A
Sbjct: 336 GAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEA 395
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVY-DG 378
+L M + P S L++ + + P L +F+ L + ++ S+ DG
Sbjct: 396 KRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDG 455
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
K G DEA K++K M +P+ I Y+ +I G+ AG+ E A + ++ +G
Sbjct: 456 ----FCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADG 511
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PDI T+ ++I+G D A F KM + + D+ +V+I GFL + + A
Sbjct: 512 IRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAI 571
Query: 499 KLLVEMIEKVRLRPWQATFKTLIE 522
+L+ EM+ K R +TF+ L++
Sbjct: 572 QLIDEMVGK-RFSADSSTFQMLLD 594
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 122/273 (44%), Gaps = 7/273 (2%)
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+V ++L+ + +++ D + V K LG ++ + L G+ EA
Sbjct: 130 NVYSLNVLINCLCRLSHVDFAV--SVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVG 187
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ M +G EP+ I+Y+ VI GLCK G A V +ME+N P++ T+ +I C
Sbjct: 188 LFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLC 247
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
V+ A+ ++M+++ D + +++GF S ++N A +L EM+ + + P
Sbjct: 248 KDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGR-NVMPDT 306
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSV 574
TF L++ L + EA + M ++ P + + + E +K L +
Sbjct: 307 VTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGI 366
Query: 575 ----KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
P+ ++Y + + R EAK LL
Sbjct: 367 MIGKGCAPNLSSYNILINGYCKSKRMNEAKRLL 399
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 98/223 (43%), Gaps = 5/223 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
++ K ++ A + M G + + + +I LC+ + A +V+ +M + G P
Sbjct: 105 SIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQP 164
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+ LI G C ++ A+ F +M+ ++ + + +ING A ++
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF 224
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
+M E+ R +P T+ T+I+ L R + EA+ L M + PP + + F
Sbjct: 225 RKM-EQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCS 283
Query: 560 -GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
G + +A+ K + + P + + + + EG EA+
Sbjct: 284 LGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEAR 326
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%), Gaps = 6/319 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ +G K + +TY+ ++ L + + + V+++M+KEG D TY + K ++
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA +LF+ M P V S L+ ++ + V + + ES+G Y
Sbjct: 341 NDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV--LFEEMESVGIQPDLFTYC 398
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L K G+ D+A+++ M+ G PD ITY+ + L + GRF++A + ++M+E+
Sbjct: 399 SIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKES 458
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD+ T+ L+ G EVD A +++E+ D+ D + S V+ A
Sbjct: 459 GLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEA 518
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++LL + L P +++ LI+ L A R+ EA N L +K+Q P + IS
Sbjct: 519 HELL-QFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLIS 577
Query: 558 KF---GTVEDASEFLKALS 573
G ++ A E L+ +S
Sbjct: 578 ALGQTGQIDTAFELLEEMS 596
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 149/339 (43%), Gaps = 7/339 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++ L + + + + + EM++ G D TY + K + A++L E M
Sbjct: 116 TYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM 175
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
P V S L+ + + + F++ + + G + + AL K G
Sbjct: 176 ERHGCPPDVMTYSSLITGLG--KDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAG 233
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R D+A +++ MK G +P +TY+ +I G K G +A N+LDEM+ NGC PD+ T++
Sbjct: 234 RVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYS 293
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G A+++D A KM ++ D + LING +N A +L M K
Sbjct: 294 CLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSK 353
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVED 564
P T+ TLI L A R+E A L M+ P + I+ K G V+D
Sbjct: 354 -GCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDD 412
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
A + K P Y S GR EA+ +
Sbjct: 413 ADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKI 451
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 143/317 (45%), Gaps = 6/317 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN +L LA+ + + EE+K + D+ +Y + + E A+++
Sbjct: 8 NVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVV 67
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M KP++ + L+ + D L R+ + G Y+ + L
Sbjct: 68 AEMQAKGCKPNLWTYNTLVDCLGKAGQFDEAL--RLLAEMRDNGCVPDVRTYNCLISTLG 125
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR EA + M+ G PD TY+ +I+GL K GR + A +L+EME +GC PD+
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ LI G E +A F +M + D+ L++ RV+ A +LL EM
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGT 561
E+ ++P T+ LI L EA NLL MK+ P + I+ K
Sbjct: 246 KER-GVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQ 304
Query: 562 VEDASEFLKALSVKEYP 578
+++A + LK + + P
Sbjct: 305 LDEACQVLKKMEKEGCP 321
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 5/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + AL K G+ +EA+ + + +K A + PD ++YS +I L +AG++E A V+ EM
Sbjct: 11 TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ GC P++ T+ L+ A + D AL A+M + D + LI+ R+
Sbjct: 71 QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A+ L EM E+ + P T+ +LI L R ++AM LL M++ PP +
Sbjct: 131 SEAFTLFAEMRERGCV-PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSS 189
Query: 555 YISKFG----TVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
I+ G TV+ F + P S + + ++ GR +A +LL
Sbjct: 190 LITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELL 242
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 112/232 (48%), Gaps = 5/232 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + +L + G+++ A +++ M+ G +P+ TY+ ++ L KAG+F++A +L EM
Sbjct: 47 YSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMR 106
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+NGC+PD++T+ LI A + A FA+M E+ D + LI G R
Sbjct: 107 DNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQ 166
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A +LL EM E+ P T+ +LI L +A L + MK++ P F
Sbjct: 167 KAMELLEEM-ERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTAL 225
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G V+DA E L + + P Y + F G EA +LL
Sbjct: 226 MDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 128/312 (41%), Gaps = 48/312 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G +TITYN ++ L + + D + + MK +G D+ TY + K +
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARV 375
Query: 318 EDAVKLFEFMMDGPYKPSV-QDCSLL--LRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
E A LFE M +P + CS++ L +++ D R+ ++ G S
Sbjct: 376 ESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD-----RLFSEMRGKGLSPDVI 430
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ +L + GRF EA K+ + MK +G PD TY ++ GL K +DAC +L E+
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKEL 490
Query: 435 EENGCI-----------------------------------PDIKTWTILIQGHCAANEV 459
E GC P ++ LI A V
Sbjct: 491 IEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRV 550
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFK 518
A + E+ D LI+ +++ A++LL EM ++ ++L P ++
Sbjct: 551 SEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSP--RSYS 608
Query: 519 TLIEKL--LGAR 528
L+ KL GAR
Sbjct: 609 NLVRKLQDWGAR 620
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 142/350 (40%), Gaps = 38/350 (10%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P YS ++ L+ L + L++M+++ C + TY +++ L KA +D
Sbjct: 286 KPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGR 345
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
L F K D V + + LG K R+
Sbjct: 346 L--FDRMKSKGCNPDVVTYSTLITALG---------------------------KAARVE 376
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
L F + E G + + TY I+ VL + V D + EM+ +G D+ TY
Sbjct: 377 SACVL--FEEM-ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYN 433
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK 363
+ ++A K+FE M + P V LL +S D GL+ + +
Sbjct: 434 AFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQ 493
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G + +D LT G DEA ++++ + G P +Y+ +I L KAGR
Sbjct: 494 ----GCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGR 549
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+A N L++++E G PDI +++ LI ++D A +M ++
Sbjct: 550 VSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRG 599
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 223/508 (43%), Gaps = 39/508 (7%)
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
+W+ D +P + Y+ ML LV+ ++LK + +M + T+ ++ L +
Sbjct: 142 HWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCR 201
Query: 177 AKK----------------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDWDDKI 219
A + D G ++E +D + +V G W +
Sbjct: 202 AHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSN-- 259
Query: 220 GKKLEDMKIELSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
+S N ++ KE R+ AL F + + G+ + T+N ++ L +
Sbjct: 260 ----------VSVNVIVHGFCKEGRVE--DALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
V+ +++ M +EGY+ D+ TY + K +++AV+ + M+ P+
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVT 367
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ L+ ++ N + +A S G ++ + + L A ++ +
Sbjct: 368 YNTLISTLCKENQVEEAT--ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEE 425
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M++ G EPD TY+ +I LC G+ ++A N+L +ME +GC + T+ LI G C AN+
Sbjct: 426 MRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANK 485
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ A F +M ++ + LI+G +RV A +L+ +MI + + +P + T+
Sbjct: 486 IREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQ-KPDKFTYN 544
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVK 575
+L+ +++A ++++ M P + IS K G VE AS+ L+++ +K
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604
Query: 576 EYP-SSAAYLQVFESFFNEGRHYEAKDL 602
+ AY V + F + + EA +L
Sbjct: 605 GIALTPHAYNPVIQGLFRKRKTTEAINL 632
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 157/358 (43%), Gaps = 40/358 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F + + Y IL L R S D ++E+MK G EM ++ +
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILI 125
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ +F + ++ + + +M+D D L PD R+ N
Sbjct: 126 ESYAQFELQDEILGVVHWMID--------DFGL---------KPDTHFYNRMLNL----- 163
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ DG + L ++ M G +PD T++ +I LC+A + A
Sbjct: 164 ------LVDGNNLKLVEIAH--------AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAI 209
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L++M G +PD KT+T ++QG+ ++D AL +M+E ++V+++GF
Sbjct: 210 LMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGF 269
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ RV A + EM + P Q TF TL+ L A ++ A+ ++ +M ++ Y P
Sbjct: 270 CKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPD 329
Query: 549 PEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ IS K G V++A EFL + ++ P++ Y + + E + EA +L
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 35/319 (10%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L + V + + + +G D+ T+ + + R A++LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-----------------------VFRVA 361
E M +P ++L+ S+ S D L F A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 362 NK----------YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
NK E G S + Y+ + L K R ++A ++M M G +PD TY
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ C+ G + A +++ M NGC PDI T+ LI G C A V+ A +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL-GARRL 530
K + +I G +++ A L EM+E+ P +++ + L G +
Sbjct: 604 KGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPI 663
Query: 531 EEAMN-LLRLMKKQNYPPF 548
EA++ L+ L++K P F
Sbjct: 664 REAVDFLVELLEKGFVPEF 682
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A K F P+ Y +++ L ++G F+D +L++M+ +GC + ILI+ + A
Sbjct: 73 ASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESY-AQF 131
Query: 458 EVDRALLCFAKMMEKNYDADAD------LLDVLINGFLSQKRVNGAY-KLLVEMIEKVRL 510
E+ +L M ++ D +L++L++G + K V A+ K+ V I
Sbjct: 132 ELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGN-NLKLVEIAHAKMSVWGI----- 185
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
+P +TF LI+ L A +L A+ +L M P + F + G +E+ +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQ--GYIEEG-DLDG 242
Query: 571 ALSVKEYP-------SSAAYLQVFESFFNEGRHYEAKDLL 603
AL ++E S+ + + F EGR +A + +
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
>gi|255660914|gb|ACU25626.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 481
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++H+ T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP T++ +I+G +G+ + A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKMDTAM 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G ++D A F +M KN + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGKNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ ++ K P
Sbjct: 231 VSVDQVHDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAGKMSEAQSILKEMVDKYIAPK 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS + G ++ A++ LKA+ P+ A + V E+F G+H A LL
Sbjct: 290 DNSIFMRLISSQCEAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDRAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKEGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M KN + LI G+
Sbjct: 171 RFFEDMKSREISPDVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LK++ P+ A + V E++ G++ +A LL
Sbjct: 290 DNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660910|gb|ACU25624.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 484
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKQGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T+ +I+G +G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXTFXVLIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ + + A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKXEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P + TL+ L A ++ EA ++L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAIXYSTLLPGLCNAEKMSEARSILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ I+ K G ++ AS+ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLITSQCKSGNLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|357140802|ref|XP_003571952.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g55630-like [Brachypodium distachyon]
Length = 501
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 179/384 (46%), Gaps = 24/384 (6%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRI---------YPVKALGFFRWVGEHSGYKHNTITYNG 271
+ L++M + +S+ V VL + + +P A FF W G+ GY H+T YN
Sbjct: 122 QALDEMNLRVSNELVREVLSRIVVSVDSVNRERFPRLAYKFFLWAGQQEGYHHSTGMYNL 181
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY----IKISRQFQKFRMMEDAVKLFEFM 327
+++V A+ V+ W ++EEM + G + T+ + + R++E +K F
Sbjct: 182 VMKVFAQCGEVKAMWRLLEEMTENGLSISARTFHLLICTCGQAGLRRRLVERFIKSSSF- 240
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
Y+P + +L ++ +I L+ V K G+S Y+ + RA LG
Sbjct: 241 ---NYRPFRNSFNAILHTLLTIE--QYSLIEWVHQKMLMEGHSPDVLTYNIVMRAKYMLG 295
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ D+ +++ M G PD TY+ ++ L K + A N+L+ M + GC+P + +T
Sbjct: 296 KLDQFHRLLDEMGKNGLTPDLHTYNILLHVLGKGDKPLAALNLLNYMSDVGCVPSVLHFT 355
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G A ++ F +MM+K + D V+I G+++ + A KL +M+ +
Sbjct: 356 NLIDGLSRAGNLEACKYFFDEMMKKGCEPDVVCYTVMITGYVAAAELEEAQKLFDDMLVR 415
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
+L P T+ T+I L ++A ++L+ M + P F Y + + +A +
Sbjct: 416 GKL-PNVYTYNTMIRGLCIVGEFDKACSMLKDMDLRGCTP---NFSVYSTLVCRLRNAGK 471
Query: 568 FLKALSVKEY-PSSAAYLQVFESF 590
+A +V +Y + YL + F
Sbjct: 472 DAEANNVIKYMANKGQYLHLLSRF 495
>gi|218200292|gb|EEC82719.1| hypothetical protein OsI_27404 [Oryza sativa Indica Group]
Length = 665
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 142/627 (22%), Positives = 251/627 (40%), Gaps = 65/627 (10%)
Query: 17 LLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINT------CQ--KIFFSTSPNS 68
L+ R S + L TR+ +S +S Q ++ C+ ++F +
Sbjct: 2 FLATRPSGSSSLITRLCVLHTVSWIVSSRQVARFSTGVDNANPGAHCRLSELFRPVRTET 61
Query: 69 SLELI---LACD-WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ 124
S +I L C WS+ +E +LE L +L V VLR L +D A F+ W +
Sbjct: 62 SCVIIGRALECGRWSESVELELEGLHVELDPFVVNKVLRGL-SDSGMAVRFYWWAESRPG 120
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F ++ + ++ L D+ L R++ Y +L +A K
Sbjct: 121 FYHNNFAIAYIISLLFVDDNFALLLEFLGRVRSQGVAFHRSLYRVLLAGYARAGK----- 175
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVV------LGSDWDDKIGKKLEDMKIELSDNFVLTV 238
D+V +T ++V G D++ IG +++ +L + +
Sbjct: 176 --------------FDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMA 221
Query: 239 LKELRIYPVKALGFFRWVG------------------EHSGYKHNTITYNGILRVLARHE 280
L + + + + RW+ + G + N + L H
Sbjct: 222 LA--KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHN 279
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
+ D +VE+M +G D+ TY + R +AV L+E M+ KP V C
Sbjct: 280 RLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACG 339
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L+ + N + F +A++ +L L+ S+Y+ + + G ++A K + M+
Sbjct: 340 ALIFGLCK--NQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQ 397
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G EPD +TY+ ++ C G + A N++ +ME +G PD ++ IL++G C A+++D
Sbjct: 398 RNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLD 457
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+A + ME D ++LI+ F K+VN A L EM K ++ T+ L
Sbjct: 458 KAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYK-GIQADAVTYGIL 516
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY 577
I L G A L M P + + + K G + A + ++ KE
Sbjct: 517 INGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576
Query: 578 -PSSAAYLQVFESFFNEGRHYEAKDLL 603
P + + + R EA DL
Sbjct: 577 SPDTVTFNTLIYWLGKSSRAVEALDLF 603
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 42/339 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + + ++ L +++ V + + + M ++++ Y + F + +E A
Sbjct: 330 GLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K FM +P V ++LL N Y S+G +
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILL------------------NHYCSIGMT---------- 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
D+AE +++ M+ +G PD +Y+ ++ GLCKA + + A + + E G
Sbjct: 422 ---------DKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF 472
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
DI + ILI C A +V+ AL F +M K ADA +LING N A +L
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+M+ ++ P + ++ L + A + M ++ P F + ++
Sbjct: 533 FDQML-NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLG 591
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
K +A + K + K P + + + +EG+
Sbjct: 592 KSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGK 630
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 258 EHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + +YN +L+ L + H+ + F V + M+ G+ DI + + F + +
Sbjct: 432 EMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF-CDIVSCNILIDAFCRAKK 490
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSK 373
+ A+ LF+ M + +L+ + I +L ++ + N+ +
Sbjct: 491 VNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLA-----EELFDQMLNTKIVPNV 545
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+VY+ + L K+G F A+K+ M PD +T++ +I+ L K+ R +A ++ E
Sbjct: 546 NVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKE 605
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
M G PD T+ +I G + A + MME D D+ + LI+
Sbjct: 606 MRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLIS 658
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 123/537 (22%), Positives = 234/537 (43%), Gaps = 42/537 (7%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L+N + ++P +H S ++ L + DP+ A AFFNW+ K F+ + + ML LV
Sbjct: 68 LKNLIPSIAP--SHISALFAL---NLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVP 122
Query: 142 KDSLK---QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-------LAALNQFHD 191
L+ + + + + E L +L +L+ + D L N
Sbjct: 123 NGYLRIAENMRILMIKSTD-----SSENALFVLEMLRSMNRRVDAFKFKLTLRCYNMLLM 177
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG 251
+ + + +D + ++++ DD + + + ++ L + E +Y K +
Sbjct: 178 LLSRFLMIDEMKSVYLEML-----DDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIV- 231
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+G +T TY ++ R+++V + M +G + +Y + F
Sbjct: 232 -------QAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGF 284
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNS 370
+ R +++A+KLF M + P+V+ ++++ ++ + L +F+ + N
Sbjct: 285 CEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNV 344
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ +V + +L + FD+A+K++ M G P +TY+ +I G CK G A +
Sbjct: 345 HTYTV---LICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEI 401
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L ME N C P+ +T+ LI G C + +A+ KM+E+ + ++LI+G
Sbjct: 402 LSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
+ + AYKLL M E L P + T+ I+ L +EEA +L +K++
Sbjct: 462 EGDLGSAYKLLSLMNES-GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEV 520
Query: 548 FPEPFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G V D L K LS P+S Y + + + E EA+ L+
Sbjct: 521 IYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLV 577
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/483 (21%), Positives = 190/483 (39%), Gaps = 54/483 (11%)
Query: 120 CDKKQFRPSSTVYSLM-----LRNLVNKDSLKQFWVTLRR----------MKEDHCYIEE 164
C K ++ ++ M LRN V+ +L + RR M ED+C+
Sbjct: 250 CRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTV 309
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE 224
TY I+ L + + ++ ALN F + K + T++ L D + KK+
Sbjct: 310 RTYTVIIFALCQLGRKTE--ALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKIL 367
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ +E G + +TYN ++ +
Sbjct: 368 NGMLE------------------------------KGLIPSVVTYNALIDGYCKKGLSAS 397
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
++ M+ + TY ++ F + + + A+ L M++ +P+V ++L+
Sbjct: 398 ALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIH 457
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
DLG +++ + G + Y L K G +EA + +++K G
Sbjct: 458 G--QCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGI 515
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ + + YS +I G CK G+ D +LD+M GC+P+ T+ LI G+C A L
Sbjct: 516 KANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARL 575
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M++++ + AD +LI+ L + A+ + +M+ P + I
Sbjct: 576 LVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS-HPDVFIYTAFIHAY 634
Query: 525 LGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL-SVKEYPSS 580
RL++A L+ M + P F+ +FG+++ A LK + V PS
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694
Query: 581 AAY 583
Y
Sbjct: 695 YTY 697
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/305 (18%), Positives = 118/305 (38%), Gaps = 9/305 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + Y + H ++D ++ +M +G D Y + +F ++
Sbjct: 618 TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + + M + +PS S L++ +S+ ++ +++ + ++ + + +
Sbjct: 678 AFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRV 737
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
T + M G P+ TY + I GLCK G E A + D M+E G
Sbjct: 738 DYEFTL--------DLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQ 789
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ + L+ C A+ M+E + D +L+ G + A +
Sbjct: 790 SPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKR 849
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+ ++ + +K LI+ LL ++ +L +M+ Q P+ + I F
Sbjct: 850 VFCSFLQ-CEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGF 908
Query: 560 GTVED 564
+++
Sbjct: 909 DGIQE 913
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 81/212 (38%), Gaps = 38/212 (17%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
L F + EH G N TY + L + + + + MK++G + D Y +
Sbjct: 742 TLDLFGKMAEH-GCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ + +A++ + M++ + P + C LLL +
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGL---------------------- 838
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
YD G ++A+++ + + D + + +I GL K G +
Sbjct: 839 -------YDE--------GNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCS 883
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
++ ME GC KT+++LI+G E+D
Sbjct: 884 DLFGIMETQGCQIHPKTYSMLIEGFDGIQEID 915
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 142/578 (24%), Positives = 245/578 (42%), Gaps = 47/578 (8%)
Query: 62 FSTSPNSSLELILAC---------DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKA 112
F SP+S +AC W L N +S L V VL + +D A
Sbjct: 22 FCASPDSQF---VACLTDIVRGNQSWRVALNNSF--ISQTLKPHHVEKVLIQTLDDSRLA 76
Query: 113 SAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW--VTLRRMKEDHCYIEEETYLSI 170
FFN++ K F S+T + +++ LV + +W +L + E + S
Sbjct: 77 LRFFNFLGLHKNFDHSTTSFCILIHALVQSN---LYWPASSLLQTLLLRGLNPEGLFESF 133
Query: 171 LGVLKKAKKASDLA--ALNQFHDGMVKEIAMDNVAKTLVDV-------VLGSDWDDKIGK 221
L +K ++ L L Q + +E+ V + ++D L + I
Sbjct: 134 LDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRI 193
Query: 222 KLEDMKIELSDNFVLTVLK-ELRIYP--VKALG----FFRW---VG--EHSGYKHNTITY 269
+ M + L D V + L+ ++ +Y V++L F R +G E SG + TY
Sbjct: 194 RQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATY 253
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +R L +++ V + + + +G D+ TY + K E ++ M++
Sbjct: 254 NVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIE 313
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
+ PS S L+ + N +G F + NK + G + S VY+ + ++ K G+
Sbjct: 314 FGFVPSEAAVSNLVDGLRKKGN--IGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
DEAE + M + G P+++TYS +I CK G+ + A + L +M E G + ++ L
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I GHC ++ A F +M+ + + LI+G+ + ++ A++L EM K
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGK-G 490
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDAS 566
+ P TF LI L A R+ EA L M + N P + ++ K G A
Sbjct: 491 ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAF 550
Query: 567 EFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
E L + K P + Y + + GR EA++ +
Sbjct: 551 ELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 144/357 (40%), Gaps = 20/357 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + YN ++ + + + + ++ M +G + TY + F K ++ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKSV--Y 376
+ M + K +V S L+ + R A E + N L +V Y
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGK------LRAAKSLFDEMIANGLKPNVVIY 463
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K G A ++ M G P+ T++ +I GLC A R +A + EM E
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
IP+ T+ +LI+GHC RA +M+EK D LI+G S RV+
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 497 AYKLLVEMI-EKVRLR------PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
A + + ++ E+ +L P T+ LI L +++A L R M N P
Sbjct: 584 AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQ 643
Query: 550 EP---FVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F+ Y++ G +E A + L ++ Y + F GR EA ++L
Sbjct: 644 NTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVL 700
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 104/235 (44%), Gaps = 11/235 (4%)
Query: 261 GYKHNTITYNGILRVL---ARHESVRDFWNVVE-EMKK----EGYEMDIDTYIKISRQFQ 312
G +T TY ++ L R R+F N ++ E +K EG ++ TY +
Sbjct: 560 GLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLC 619
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K +M+ A L M+ P+ + L ++S N + + L N+++
Sbjct: 620 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT 679
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ + R KLGR EA +++ M ++G PD I+YS +I+ C+ G ++A + +
Sbjct: 680 ---YNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
M G PD + LI G C E+ +A MM + + + LI+G
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ + + + +++EM ++G D TY + + +A
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR--- 585
Query: 325 EFMMD--GPYK---------PSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLS 372
EFM D G + P+V + L+ + I D L+ R SL N
Sbjct: 586 EFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN--- 642
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
++ Y LT G ++A ++ + GF + +TY+ +I G CK GR ++A VL
Sbjct: 643 QNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLV 701
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M ++G PD +++ +I +C ++ A+ + M+ + + D + LI G
Sbjct: 702 NMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTG 761
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
+ A++L +M+ + ++P +AT+ +LI
Sbjct: 762 ELTKAFELRDDMMRR-GVKPNRATYNSLI 789
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TY ++ L + + + EM + +TY +
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 659
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
E A++L + +++G +V ++L+R + R+ E L N + +
Sbjct: 660 EKAIQLHDVLLEGFLANTVTY-NILIRGFCKLG--------RIQEAAEVLVNMIDSGISP 710
Query: 376 ----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y I + G EA K+ ++M N G PD + Y+ +I+G C G A +
Sbjct: 711 DCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELR 770
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEV 459
D+M G P+ T+ LI G C + V
Sbjct: 771 DDMMRRGVKPNRATYNSLIHGTCLMSSV 798
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 196/470 (41%), Gaps = 62/470 (13%)
Query: 124 QFRPSSTVYSLMLR----NLVNKDSLKQFWVTLRRMKED----HCYIEEETYLSILGVLK 175
+ P+ ++L+L+ +LV +D + V LR + E ++ TY +++ L
Sbjct: 161 RLAPTLLSFNLLLKCVCSSLVPRDPGRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALA 220
Query: 176 KAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
A + D AL DG+V A + V + ++ D K KL ++L
Sbjct: 221 DAGRVDDAVALVHEMVADGVVAAEAFNPVLRAMLRA-----GDVKGAAKLFGF-MQLKGC 274
Query: 234 FVLTVLKELRIYPV-------KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
T + ++ + A+G R + E G +TY ++ L R V+D W
Sbjct: 275 VPTTATYNVLVHGLLVCGRAGAAMGVMRRM-EREGVVPGVMTYGAVVDGLVRCGRVKDAW 333
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V EEM++ G + Y + F K ++ A+K++E M+ P +P+V
Sbjct: 334 KVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNVV--------- 384
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+Y + L G+ EAE + + M ++ P
Sbjct: 385 ----------------------------LYSAMIGGLANFGKMTEAELLFREMIHSKCAP 416
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ ITY +I G K G A +V +EM GC+P+ +++ILI G C + A++ +
Sbjct: 417 NIITYGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVW 476
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M+++ D +I G V+G +L +M+ P ++ L++ LL
Sbjct: 477 KHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLL 536
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE-DASEFLKALSVK 575
A+ L AM+LL M Q P ++ +FG E EFL+ L V+
Sbjct: 537 AKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGERKGREFLEGLVVR 586
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 91/206 (44%), Gaps = 7/206 (3%)
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TYS V+ L AGR +DA ++ EM +G + + + +++ A +V A
Sbjct: 205 LAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVV-AAEAFNPVLRAMLRAGDVKGAA 263
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F M K +VL++G L R A ++ M E+ + P T+ +++
Sbjct: 264 KLFGFMQLKGCVPTTATYNVLVHGLLVCGRAGAAMGVMRRM-EREGVVPGVMTYGAVVDG 322
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PS 579
L+ R+++A + M++ + I+ F G ++ A + +A+ P+
Sbjct: 323 LVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPN 382
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y + N G+ EA +LL++
Sbjct: 383 VVLYSAMIGGLANFGKMTEA-ELLFR 407
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 148/299 (49%), Gaps = 9/299 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE-MDIDTYIKISRQ 310
FF W + GY+H+ Y ++++L + W ++EEM++E + + ++ + R+
Sbjct: 108 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 167
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F RM++ A+++ + M +P LL ++ G V A+ +E +
Sbjct: 168 FASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKN-----GSVKEAASLFEDMRIR 222
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ ++ + + + G+ EA+ ++ ++ AGFEPD + Y+ ++ G AG+ DA
Sbjct: 223 FTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAY 282
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L EM C P++ ++T LIQ CA +++ A+ F +M ADA LI+GF
Sbjct: 283 DLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGF 342
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++ Y+LL MI++ + P T+ ++ LEE + L+ M+K P
Sbjct: 343 CKWGKISKGYELLDNMIQQGHI-PNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTP 400
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/454 (20%), Positives = 177/454 (38%), Gaps = 39/454 (8%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
+LE L+E + VL + + FF W + +R S VY M++ L
Sbjct: 74 KLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYEVYKAMIKILG 133
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM- 199
W + M+ ++ +L +++ A + + D M K
Sbjct: 134 KMRQFGAVWALIEEMRRENPQFVSPYVFVVL--MRRFASARMVKKAIEVLDEMPKYGCEP 191
Query: 200 -DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++V L+D + + + EDM+I +
Sbjct: 192 DEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTL------------------------ 227
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
KH + +L R + + V+ ++++ G+E DI Y + + M
Sbjct: 228 ----KH----FTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 279
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA L + M +P+V + L++++ + + + RV + +S G Y
Sbjct: 280 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAM--RVFFEMQSCGCPADAVTYTT 337
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G+ + +++ M G P+ +TY ++ K E+ +++EM + G
Sbjct: 338 LISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 397
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C PD+ + I+I+ C E+ + + +M D ++I+GFLSQ+ + A
Sbjct: 398 CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEAC 457
Query: 499 KLLVEMIEKVRLR-PWQATFKTLIEKLLGARRLE 531
+ EM+ + L P T K L+ LL A +LE
Sbjct: 458 EFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLE 491
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 108/240 (45%), Gaps = 19/240 (7%)
Query: 388 RFDEAEKMMKA------MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
RF A + KA M G EPD + ++ LCK G ++A ++ ++M P
Sbjct: 167 RFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIR-FTP 225
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+K +T L+ G C ++ A ++ E ++ D + + L+ G+ + ++ AY LL
Sbjct: 226 TLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLL 285
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---K 558
EM K P +F TLI+ L +++EEAM + M+ P + IS K
Sbjct: 286 KEMRRK-ECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCK 344
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
+G + E L + + + P+ YL + + +E K+ L +C + + KI
Sbjct: 345 WGKISKGYELLDNMIQQGHIPNPMTYLHIMAA-------HEKKEELEECIELMEEMRKIG 397
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 111/277 (40%), Gaps = 8/277 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + +TY ++ + + + +++ M ++G+ + TY+ I +K +
Sbjct: 324 QSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEEL 383
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+ ++L E M P + ++++R + G+ RV N+ E+ G S +
Sbjct: 384 EECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGV--RVWNEMEATGLSPGLDTFV 441
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ EA + K M G P T +++ L +A + E + +V +
Sbjct: 442 IMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIM 501
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC ++ WTI I + V A MM+ D L+ G +K N
Sbjct: 502 TKGCDLNVYAWTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGL--RKLYN 559
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
++ E+ EKVR + + K G R L+E
Sbjct: 560 --RQIAAEITEKVRKMAAEREMTFKMYKRRGERNLKE 594
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 15/399 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLK-ELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
W K LE +K+++ V VLK ++ I+ VK + FF+W G+ ++H++ TY ++
Sbjct: 74 WGPDAEKALEVLKLKVDHRLVREVLKIDVEIH-VK-IQFFKWAGKRRNFEHDSTTYMALI 131
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L + + W ++EM + + +I + K +M+ A+ +F + K
Sbjct: 132 HCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCK 191
Query: 334 PSVQDC-SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDE 391
P+ S++L + ++ V + N+ + G+ L +V Y + A KLGR D
Sbjct: 192 PTSNTYNSMILMLMQEGHHEK---VHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDS 248
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + MK G P Y+ ++ K GR E A ++ EM+E GC + T+T LI+
Sbjct: 249 AISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G A +V+ A F M+++ D L++ LIN R+ A KL EM E ++
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM-ESLQCT 367
Query: 512 PWQATFKTLIEKLLGAR-RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P T+ T+I+ L ++ R EA MK+ P + I F VE A
Sbjct: 368 PNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
L+ + K + P AAY + + + + YEA + L++
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINA-LGKAKRYEAANELFQ 465
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 222/539 (41%), Gaps = 21/539 (3%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V VL K+D + FF W ++ F ST Y ++
Sbjct: 74 WGPDAEKALEVLKLKVDHRLVREVL-KIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIH 132
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L + W T++ M C I I+ VL KAK + AL+ F+ ++
Sbjct: 133 CLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK--ALSIFYQIKGRKC 190
Query: 198 -AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG----- 251
N +++ +++ +K+ + +M E D TV I LG
Sbjct: 191 KPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE-GDCLPDTVTYSALIAAFGKLGRDDSA 249
Query: 252 --FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
F + E+ G Y IL + + V +V+EMK++G + + TY ++ +
Sbjct: 250 ISLFDEMKEN-GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K +E+A +F M+ KP V + L+ + L ++ + ESL
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR--LADAIKLFEEMESLQC 366
Query: 370 SLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ + Y+ + +AL R EA + MK G P + TYS +I G CK R E A
Sbjct: 367 TPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKAL 426
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L+EM+E G P + LI A + A F ++ E + A + V+I
Sbjct: 427 LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHL 486
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP- 547
R++ A L EM +K+ P + L+ ++ +EA +LLR M++ P
Sbjct: 487 GKCGRLSEAVDLFNEM-KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Query: 548 --FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++ G + A E F + + K P +Y V G EA L+
Sbjct: 546 LNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 184/436 (42%), Gaps = 57/436 (13%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
+E+ N+ + L +T+ +++ KL D S F + P++ +Y+ +L
Sbjct: 218 NEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEM--KENGLHPTAKIYTTILGIY 275
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+++ ++ MKE C + TY ++ + KA K + A + F + M+KE
Sbjct: 276 FKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEE--AYSIFMN-MLKEGCK 332
Query: 200 DNVAKTLVDVVLGSDWDDKIGK--KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
DVVL ++ + +GK +L D I+L + ++ L+ P
Sbjct: 333 P-------DVVLINNLINLLGKAGRLAD-AIKLFEE-----MESLQCTP----------- 368
Query: 258 EHSGYKHNTITYNGILRVL--ARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
N +TYN +++ L ++ + F W E+MK+ G TY + F K
Sbjct: 369 -------NVVTYNTVIKALFESKARASEAFLW--YEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 315 RMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY-----ESLG 368
+E A+ L E M + + P CSL IN + AN+ E+ G
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSL-------INALGKAKRYEAANELFQELRENCG 472
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S S VY + + L K GR EA + MK G PD Y+ ++ G+ + G ++A
Sbjct: 473 YS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAH 531
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L MEENGC PD+ + I++ G A+ F +M D + ++
Sbjct: 532 SLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCL 591
Query: 489 LSQKRVNGAYKLLVEM 504
A KL+ EM
Sbjct: 592 SRAGMFEEAAKLMKEM 607
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 160/349 (45%), Gaps = 8/349 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A GF R +G G + N IT+N I+ L R +++ V+ EM ++GY D TY +
Sbjct: 36 EAFGFLRSMG-LKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTL 94
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K A+ L M+ P+V + L+ S+ N + + F ++
Sbjct: 95 VNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEF--FDQMHVR 152
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G ++ Y I + G DEA +++ M +GF P +TY+ +I G C GR E+A
Sbjct: 153 GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEA 212
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L +M G +PD+ +++ +I G E+DRA +M+ K+ DA LI G
Sbjct: 213 IGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQG 272
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q+R+ A + EM+ ++L P + T+ TLI L +A++L M ++ + P
Sbjct: 273 LCEQRRLTEACDMFQEML-TIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLP 331
Query: 548 FPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFN 592
+ I+ + E LK PS+ Y + E+ N
Sbjct: 332 DAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN 380
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 5/231 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ I L + GR E +++ M G+ PD +TY+ ++ G CK G F A + EM
Sbjct: 56 FNMIINGLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMV 115
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
NG P++ T+T LI C A ++RA+ F +M + + +INGF Q ++
Sbjct: 116 RNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLD 175
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
AY++L EM + P T+ LI R+EEA+ LL+ M + P +
Sbjct: 176 EAYRVLNEMT-RSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTI 234
Query: 556 ISKFGTVEDASEF----LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
IS F ++ ++ + P + Y + + + R EA D+
Sbjct: 235 ISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDM 285
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + KL R DEA +++M G EP+ IT++ +I GLC+ GR ++ VL EM
Sbjct: 21 YNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEVLVEMS 80
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G +PD T+ L+ G+C +AL+ A+M+ + LIN +N
Sbjct: 81 RKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLN 140
Query: 496 GAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A + +M VR L P + T+ T+I L+EA +L M + + P +
Sbjct: 141 RAMEFFDQM--HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNA 198
Query: 555 YISK---FGTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
I+ G +E+A L+ + K P +Y + F
Sbjct: 199 LINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGF 238
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 127/329 (38%), Gaps = 58/329 (17%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FF + G N TY I+ A+ + + + V+ EM + G+ I TY +
Sbjct: 141 RAMEFFDQM-HVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
ME+A+ L + M+ P V S ++ + N +L F++ K E +
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFAR--NQELDRAFQM--KVEMI 255
Query: 368 GNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G S+ Y + + L + R EA M + M PD TY+ +I CK G
Sbjct: 256 GKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLN 315
Query: 426 DACNVLDEMEENGCIPDIKTWTILI----------------------------------- 450
A ++ DEM + G +PD T+ +LI
Sbjct: 316 KALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLI 375
Query: 451 ---------------QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+G C +D A F M+ KN+ + + +V+I+G V
Sbjct: 376 ENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVL 435
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
AYKL EM+ V P T L++ L
Sbjct: 436 KAYKLYKEMVH-VDFVPHTVTVLALVKAL 463
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 90/214 (42%), Gaps = 5/214 (2%)
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ K M+ G P+ +TY+ +I G CK R ++A L M G P++ T+ ++I G
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C + +M K Y D + L+NG+ + + A L EM+ L P
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRN-GLSPN 122
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK 570
T+ +LI + A L AM M + P + I+ F G +++A L
Sbjct: 123 VVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLN 182
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
++ + PS Y + GR EA LL
Sbjct: 183 EMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLL 216
>gi|255660934|gb|ACU25636.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 484
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 168/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G G+ E A
Sbjct: 111 VERTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLCGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKXREISPDVITYNTMINGYYRVKKIEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S RV+ A LL EM + ++P T+ TL+ L A ++ EA +L+ ++ K P
Sbjct: 231 VSVDRVDDALTLLEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEASGILKEMVDKYIAPK 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E++ G + +A LL
Sbjct: 290 DNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGDYEKAIKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 186/399 (46%), Gaps = 15/399 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLK-ELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
W K LE +K+++ V VLK ++ I+ VK + FF+W G+ ++H++ TY ++
Sbjct: 74 WGPDAEKALEVLKLKVDHRLVREVLKIDVEIH-VK-IQFFKWAGKRRNFEHDSTTYMALI 131
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L + + W ++EM + + +I + K +M+ A+ +F + K
Sbjct: 132 HCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNKALSIFYQIKGRKCK 191
Query: 334 PSVQDC-SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDE 391
P+ S++L + ++ V + N+ + G+ L +V Y + A KLGR D
Sbjct: 192 PTSNTYNSMILMLMQEGHHEK---VHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDS 248
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + MK G P Y+ ++ K GR E A ++ EM+E GC + T+T LI+
Sbjct: 249 AISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G A +V+ A F M+++ D L++ LIN R+ A KL EM E ++
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEM-ESLQCT 367
Query: 512 PWQATFKTLIEKLLGAR-RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P T+ T+I+ L ++ R EA MK+ P + I F VE A
Sbjct: 368 PNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALL 427
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
L+ + K + P AAY + + + + YEA + L++
Sbjct: 428 LLEEMDEKGFAPCPAAYCSLINA-LGKAKRYEAANELFQ 465
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 134/539 (24%), Positives = 222/539 (41%), Gaps = 21/539 (3%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V VL K+D + FF W ++ F ST Y ++
Sbjct: 74 WGPDAEKALEVLKLKVDHRLVREVL-KIDVEIHVKIQFFKWAGKRRNFEHDSTTYMALIH 132
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L + W T++ M C I I+ VL KAK + AL+ F+ ++
Sbjct: 133 CLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVNK--ALSIFYQIKGRKC 190
Query: 198 -AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG----- 251
N +++ +++ +K+ + +M E D TV I LG
Sbjct: 191 KPTSNTYNSMILMLMQEGHHEKVHELYNEMCNE-GDCLPDTVTYSALIAAFGKLGRDDSA 249
Query: 252 --FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
F + E+ G Y IL + + V +V+EMK++G + + TY ++ +
Sbjct: 250 ISLFDEMKEN-GLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIK 308
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K +E+A +F M+ KP V + L+ + L ++ + ESL
Sbjct: 309 GVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGR--LADAIKLFEEMESLQC 366
Query: 370 SLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ + Y+ + +AL R EA + MK G P + TYS +I G CK R E A
Sbjct: 367 TPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKAL 426
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L+EM+E G P + LI A + A F ++ E + A + V+I
Sbjct: 427 LLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHL 486
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP- 547
R++ A L EM +K+ P + L+ ++ +EA +LLR M++ P
Sbjct: 487 GKCGRLSEAVDLFNEM-KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPD 545
Query: 548 --FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++ G + A E F + + K P +Y V G EA L+
Sbjct: 546 LNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLM 604
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 100/439 (22%), Positives = 181/439 (41%), Gaps = 57/439 (12%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
+E+ N+ + L +T+ +++ KL D S F + P++ +Y+ +L
Sbjct: 218 NEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEM--KENGLHPTAKIYTTILGIY 275
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA--LNQFHDGMVKEI 197
+++ ++ MKE C + TY ++ + KA K + + +N +G ++
Sbjct: 276 FKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDV 335
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
+ N L++++ K G+ + +K+ ++ L+ P
Sbjct: 336 VLIN---NLINLL------GKAGRLADAIKL-------FEEMESLQCTP----------- 368
Query: 258 EHSGYKHNTITYNGILRVL--ARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
N +TYN +++ L ++ + F W E+MK+ G TY + F K
Sbjct: 369 -------NVVTYNTVIKALFESKARASEAFLW--YEKMKENGVVPSSFTYSILIDGFCKT 419
Query: 315 RMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY-----ESLG 368
+E A+ L E M + + P CSL IN + AN+ E+ G
Sbjct: 420 NRVEKALLLLEEMDEKGFAPCPAAYCSL-------INALGKAKRYEAANELFQELRENCG 472
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S S VY + + L K GR EA + MK G PD Y+ ++ G+ + G ++A
Sbjct: 473 YS-SARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAH 531
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L MEENGC PD+ + I++ G A+ F +M D + ++
Sbjct: 532 SLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCL 591
Query: 489 LSQKRVNGAYKLLVEMIEK 507
A KL+ EM K
Sbjct: 592 SRAGMFEEAAKLMKEMNSK 610
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 162/332 (48%), Gaps = 13/332 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ +ELS ++ VLK+L AL FFRW + G+KH T +YN ++ L + +
Sbjct: 113 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 172
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
WN+V +MK++G + +T+ I+R++ + R +++AV+ FE M ++ V D + L
Sbjct: 173 NVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRL 231
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM---MKAM 399
L ++ N V + ++ + + K L G+ K+ + M
Sbjct: 232 LDTLCKSRN-----VKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREM 286
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ GFEPD +T+ +I CKA ++++A + EME P + LI G + +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
AL F ++ + +A + ++ + ++ AY+++ EM K + P T+
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEM-RKSGVGPNSRTYDI 405
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
++ L+ R+ +EA ++ + M ++ P EP
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSRE---PGCEP 434
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 186/486 (38%), Gaps = 80/486 (16%)
Query: 61 FFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVC 120
S +PNS +E +L + ELSP L +V VL+KL N A +FF W
Sbjct: 100 LISKNPNSCIESLL--------DGAPMELSPAL----IVEVLKKLSNAGFLALSFFRWAE 147
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+K F+ ++ Y+L++ L W + MK + ET+ I +A+K
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG-ILSRETFALITRRYARARKV 206
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+ + + ++ + + + L+D + S K + + MK
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNR-LLDTLCKSRNVKKAQEVFDKMK------------- 252
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
H +K + +Y +L + +++ V EM+ EG+E D
Sbjct: 253 ------------------HGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPD 294
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--------- 351
+ T+ + K R ++A++LF M KPS L+ + S
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFE 354
Query: 352 --------PD----------------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
P+ + +R+ ++ G + YD I L K
Sbjct: 355 QLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGR 414
Query: 388 RFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
+ EA + + M + G EP TY +I C R + A + DEM+ G +P + +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLF 474
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ LI C ++++ A F +M++ A + L L R + A L+ E I+
Sbjct: 475 STLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL-LMAEKIK 533
Query: 507 KVRLRP 512
K+R P
Sbjct: 534 KLRKAP 539
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 162/332 (48%), Gaps = 13/332 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ +ELS ++ VLK+L AL FFRW + G+KH T +YN ++ L + +
Sbjct: 113 LDGAPMELSPALIVEVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQF 172
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
WN+V +MK++G + +T+ I+R++ + R +++AV+ FE M ++ V D + L
Sbjct: 173 NVIWNLVSDMKRKGI-LSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRL 231
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM---MKAM 399
L ++ N V + ++ + + K L G+ K+ + M
Sbjct: 232 LDTLCKSRN-----VKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREM 286
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ GFEPD +T+ +I CKA ++++A + EME P + LI G + +
Sbjct: 287 RDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRL 346
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
AL F ++ + +A + ++ + ++ AY+++ EM K + P T+
Sbjct: 347 KEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEM-RKSGVGPNSRTYDI 405
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
++ L+ R+ +EA ++ + M ++ P EP
Sbjct: 406 ILHHLIKGRKSKEAYSVFQRMSRE---PGCEP 434
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 105/486 (21%), Positives = 185/486 (38%), Gaps = 80/486 (16%)
Query: 61 FFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVC 120
S +PNS +E +L + ELSP L +V VL+KL N A +FF W
Sbjct: 100 LISKNPNSCIESLL--------DGAPMELSPAL----IVEVLKKLSNAGFLALSFFRWAE 147
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+K F+ ++ Y+L++ L W + MK + ET+ I +A+K
Sbjct: 148 KQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRKG-ILSRETFALITRRYARARKV 206
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+ + + ++ + + + L+D + S K + + MK
Sbjct: 207 KEAVESFEKMEKFGFQMGVSDFNR-LLDTLCKSRNVKKAQEVFDKMK------------- 252
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
H +K + +Y +L + +++ V EM+ EG+E D
Sbjct: 253 ------------------HGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPD 294
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--------- 351
+ T+ + K R ++A++LF M KPS L+ + S
Sbjct: 295 VVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFE 354
Query: 352 --------PD----------------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
P+ + +R+ ++ G + YD I L K
Sbjct: 355 QLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGR 414
Query: 388 RFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
+ EA + + M + G EP TY +I C R + A + DEM+ G +P + +
Sbjct: 415 KSKEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLF 474
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ LI C ++++ A F +M++ A + L L R + A L+ E I
Sbjct: 475 STLINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTAL-LMAEKIX 533
Query: 507 KVRLRP 512
K+R P
Sbjct: 534 KLRKAP 539
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 169/383 (44%), Gaps = 16/383 (4%)
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
+LSIL + + +S+ A +G+ D V + DVV S D + L +
Sbjct: 136 FLSILAASDEDQGSSEQEAAASNPEGV------DRVCAAIADVV-ASGADANLEAALSAL 188
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
L + VL VL + + FFRW G+ H TITY +L +L +
Sbjct: 189 SPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMV 248
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+++EM K G + +D + + F +++AV +FE M + V+ + LL ++
Sbjct: 249 AMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVAL 307
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ GL ++ + S + Y + A EA ++ M G
Sbjct: 308 AK-----EGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGM 362
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+PD + ++ +I GL + R +A + + M+ G P++ T+T+LI+ HC ++D A+
Sbjct: 363 DPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAME 422
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
CF +M E D L+ G+ + K+++ +L EM +K P T+ LI+ L
Sbjct: 423 CFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQK-GCPPDARTYNALIKLL 481
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
++A + + M K+ P
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEP 504
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 158/350 (45%), Gaps = 7/350 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SG + TYN +R L +++ V + + + +G D+ TY + K
Sbjct: 242 ESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEF 301
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E ++ M++ + PS S L+ + N +G F + NK + G + S VY+
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN--IGSAFDLVNKVKKFGVAPSLFVYN 359
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ ++ K G+ DEAE + M + G P+++TYS +I CK G+ + A + L +M E
Sbjct: 360 ALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEV 419
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + ++ LI GHC ++ A F +M+ + + LI+G+ + ++ A
Sbjct: 420 GIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNA 479
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
++L EM K + P TF LI L A R+ EA L M + N P + ++
Sbjct: 480 FRLYHEMTGK-GISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIE 538
Query: 555 YISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G A E L + K P + Y + + GR EA++ +
Sbjct: 539 GHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 156/383 (40%), Gaps = 46/383 (12%)
Query: 227 KIELSDNFVLTVLKELRIYPVK---------ALGFFRWVGEHSGYKHNTITYNGILRVLA 277
++ L+++F+ LK + V AL FF ++G H + H+T ++ ++ L
Sbjct: 45 RVALNNSFISQTLKPHHVEKVLIQTLDDSRLALRFFNFLGLHKNFDHSTTSFCILIHALV 104
Query: 278 RH------------------------ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+ ES D + G+++ I TY++ R+
Sbjct: 105 QSNLYWPASSLLQTLLLRGLNPEGLFESFLDSYRKCNFSTTLGFDLLIQTYVQNRREL-- 162
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
D + + MMD P ++ S +L + I + L + ++ S G
Sbjct: 163 -----DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMAL--HLFDEIVSSGLRPDV 215
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
VY + R+L +L F A +++ M+++G + TY+ I GLCK R +A + +
Sbjct: 216 YVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNL 275
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G D+ T+ L+ G C E + +M+E + + L++G +
Sbjct: 276 LSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGN 335
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
+ A+ LV ++K + P + LI + +L+EA +L M + P +
Sbjct: 336 IGSAFD-LVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYS 394
Query: 554 QYISKF---GTVEDASEFLKALS 573
I F G ++ A FL ++
Sbjct: 395 ILIDSFCKRGKLDVALHFLGKMT 417
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + + Y ++ A+ +++ + + + M EG ++ TY + K +M+ A
Sbjct: 665 GLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKA 724
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L M+ P+ + L ++S N + + L N+++ Y+ +
Sbjct: 725 ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT---YNILI 781
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R KLGR EA +++ M ++G PD I+YS +I+ C+ G ++A + + M G
Sbjct: 782 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 841
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PD + LI G C E+ +A MM + + + LI+G
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 119/285 (41%), Gaps = 13/285 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + YN ++ + + + + ++ M +G + TY + F K ++ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKSV--Y 376
+ M + K +V S L+ + R A E + N L +V Y
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGK------LRAAKSLFDEMIANGLKPNVVIY 463
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K G A ++ M G P+ T++ +I GLC A R +A + EM E
Sbjct: 464 TSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVE 523
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
IP+ T+ +LI+GHC RA +M+EK D LI+G S RV+
Sbjct: 524 WNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE 583
Query: 497 AYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
A + + ++ E+ +L + F L+ RL++A++ R M
Sbjct: 584 AREFMNDLQGEQQKLN--EMCFSALLHGYCKEGRLDDALDACREM 626
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/262 (22%), Positives = 123/262 (46%), Gaps = 6/262 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + Y+ ++ + R + R +++++M +G D Y + K ++ A
Sbjct: 630 GVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMA 689
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGI 379
L++ M+ P+V + L+ + I D L+ R SL N ++ Y
Sbjct: 690 FGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPN---QNTYACF 746
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
LT G ++A ++ + GF + +TY+ +I G CK GR ++A VL M ++G
Sbjct: 747 LDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 805
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD +++ +I +C ++ A+ + M+ + + D + LI G + A++
Sbjct: 806 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 865
Query: 500 LLVEMIEKVRLRPWQATFKTLI 521
L +M+ + ++P +AT+ +LI
Sbjct: 866 LRDDMMRR-GVKPNRATYNSLI 886
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 35/187 (18%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++K M + G PDN+ Y+ +I KAG + A + D M GC+P++ T+T LI G C
Sbjct: 657 LLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLC 716
Query: 455 AANEVDRALL------------------CFAKMM--EKNYDADADLLDVLINGFLSQK-- 492
+D+A L CF + E N + L DVL+ GFL+
Sbjct: 717 KIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVT 776
Query: 493 ------------RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
R+ A ++LV MI+ + P ++ T+I + L+EA+ L M
Sbjct: 777 YNILIRGFCKLGRIQEAAEVLVNMIDS-GISPDCISYSTIIYEYCRRGDLKEAIKLWESM 835
Query: 541 KKQNYPP 547
+ P
Sbjct: 836 LNRGVNP 842
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/350 (19%), Positives = 140/350 (40%), Gaps = 24/350 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P + Y ++ L + + + + ++ + + E + ++L K +
Sbjct: 558 EKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLD 617
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK----IGKKLEDMKIELSDNFVLT 237
D AL+ + + + +AMD V +++ + D + + K++ D + DN + T
Sbjct: 618 D--ALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR-PDNVLYT 674
Query: 238 VLKELRIYPVK-ALGFFRW-VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+ + + F W + G N +TY ++ L + + + EM
Sbjct: 675 TMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 734
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
+ +TY +E A++L + +++G +V ++L+R +
Sbjct: 735 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTY-NILIRGFCKLG----- 788
Query: 356 LVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
R+ E L N + + Y I + G EA K+ ++M N G PD +
Sbjct: 789 ---RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 845
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
Y+ +I+G C G A + D+M G P+ T+ LI G C + V
Sbjct: 846 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSV 895
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/355 (28%), Positives = 158/355 (44%), Gaps = 24/355 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + NT+TY+ ++ L + + D V+ +M+ G D TY + F K + + +A
Sbjct: 573 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 632
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L M++ + PSV + L + D + + + + G + + Y I
Sbjct: 633 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV--EILDYMAARGCAPNAITYSSIV 690
Query: 381 RALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K GR EA + M ++ P I YS +I GLCKAGR ++A L+ M G
Sbjct: 691 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IPD+ T++ILI G C A +D L F M E+ AD + +IN + + + AY
Sbjct: 751 IPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYA 810
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LL EM + + T +I+ L G R++EA++ + PE IS +
Sbjct: 811 LLEEM-KTHGIAKNTVTHGIVIKALCGNDRIDEAVSY--------FHSIPEDCRDEIS-Y 860
Query: 560 GTV----------EDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
T+ E A E L+A+ P + Y+ V + F G A LL
Sbjct: 861 NTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLL 915
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 142/314 (45%), Gaps = 39/314 (12%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+TYN ++ L++ VRD ++E M + G D+ T+ + K + + DA +F+
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++ +P+V S L+ +S + D L ++ K LG + Y + L K+
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEAL--QLLAKMVELGCRANTVTYSTVVDGLLKV 591
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVI------------------------------- 415
GR ++A +++ M++AG PD +TY+ +I
Sbjct: 592 GRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTY 651
Query: 416 ----FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
GLC++GRF++A +LD M GC P+ T++ ++ G C A V AL F KM
Sbjct: 652 TTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMAR 711
Query: 472 KNYDADADLL-DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
A + LI+G R++ AY+ L MI R+ P TF LI L A R+
Sbjct: 712 DEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI-PDVVTFSILINGLCDAGRI 770
Query: 531 EEAMNLLRLMKKQN 544
+ + L M ++
Sbjct: 771 DTGLELFCGMAERG 784
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 126/283 (44%), Gaps = 12/283 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +TY+ ++ L R V ++EEM G + TY + ++A
Sbjct: 31 GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEA 90
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L E M P + L+++ + ++ FRV ++ G ++ +
Sbjct: 91 FSLLERMAANGCPPELITFGLIIKGLC--KEGEIEAAFRVVDEMVDRGFVPDVEIHTVLL 148
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL +LGR DEA + + GF PD +TY+ ++ GL KAGR E A VL + E+
Sbjct: 149 HALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSS 208
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+TI + G A + A F M + + D LI+G +++ A L
Sbjct: 209 PTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGL 268
Query: 501 LVEMIEKVRLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLM 540
L R + QA F +L+ L A RLEEA+ LL+ M
Sbjct: 269 L-------RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAM 304
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 196/466 (42%), Gaps = 57/466 (12%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
R ++ YS ++ L+ ++ V LR+M++ C + TY +++ G K+ + +
Sbjct: 575 RANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVG 634
Query: 185 ALNQ-----FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT-- 237
L + FH +V TL + S D+ + L+ M +T
Sbjct: 635 LLREMLEAGFHPSVV-------TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYS 687
Query: 238 -----VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ K R+ +ALG+F + + I Y+ ++ L + + + + +E M
Sbjct: 688 SIVDGLCKAGRV--TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERM 745
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS----- 347
+ G D+ T+ + ++ ++LF M + K + + ++ +
Sbjct: 746 IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEF 805
Query: 348 ---------------SINNPDLGLVFRVANKYESLGNSLS-----------KSVYDGIHR 381
+ N G+V + + + ++S + Y+ +
Sbjct: 806 SAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLIT 865
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+L R ++A ++++AM G PD Y V+ GL KAG E A +L EM G P
Sbjct: 866 SLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D++T+TI+I G A ++ A F +M+ KN DA + LI+ F +V+ A+KLL
Sbjct: 926 DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLL 985
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ P + T+++ L R ++A+ ++R MK +N P
Sbjct: 986 ----RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEP 1027
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 159/393 (40%), Gaps = 74/393 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN ++ L ++ ++++E M G ++ T+ I + K +E A
Sbjct: 66 GCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAA 125
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---------------------- 358
++ + M+D + P V+ ++LL ++ + D F
Sbjct: 126 FRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185
Query: 359 -RVANKYESLGNSL--------SKSVY------DGIHRALTKLGRFDEAEKMMKAMKNAG 403
A + E+ G L S +V+ DG L+K G A + +M G
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDG----LSKAGNLTGAYEFFDSMPQTG 241
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVL-DEMEENG------------------------ 438
P+ +TY +I GLCKAG+ + A +L D+ + G
Sbjct: 242 VSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLL 301
Query: 439 ----CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C+P++ + L+ G C A VD A F M E AD ++L+ G +R+
Sbjct: 302 KAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRI 361
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYPP--FPEP 551
AY+ + M P TF TLI+ L A R+ +A + R++ + P F
Sbjct: 362 PEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYA 421
Query: 552 F-VQYISKFGTVEDASEFLKALSVKEYPSSAAY 583
F ++ + K G + + + +E+ SS+++
Sbjct: 422 FLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSW 454
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 170/402 (42%), Gaps = 47/402 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + +N ++ L + V + + + + MK+ G D+ TY + + K R + +A +
Sbjct: 309 NVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHV 368
Query: 325 EFM--MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL----GNSLSKSVYDG 378
E M +G P+V S L++ + + G V + YE + G S ++ Y
Sbjct: 369 ELMRRTEG-CSPNVVTFSTLIQGLC-----NAGRVNQAWEVYERMVAVEGISPNRFTYAF 422
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFE---------------------PDNITYSQVIFG 417
+ L K G E+ + M + P +TY+ ++ G
Sbjct: 423 LLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTG 482
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L K+G DA +L+ M E+G PD+ T+ ++ G C + A F + +E+ +
Sbjct: 483 LSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPN 542
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
LI+G +++ A +LL +M+E + R T+ T+++ LL R+E+A+ +L
Sbjct: 543 VVTYSTLIDGLSKMAKMDEALQLLAKMVE-LGCRANTVTYSTVVDGLLKVGRMEDAVVVL 601
Query: 538 RLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNE 593
R M+ P + I F + +A L+ L +PS Y +
Sbjct: 602 RQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRS 661
Query: 594 GRHYEAKDLL-----YKC-PHHIRQDSKISLLFGSAKSNKVT 629
GR EA ++L C P+ I S + G K+ +VT
Sbjct: 662 GRFDEAVEILDYMAARGCAPNAITYSSIVD---GLCKAGRVT 700
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 10/251 (3%)
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
Y + I+ K R F A++ ++P+V S ++ + N D G
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQF-------GFRPTVVTYSTVIDGLCRDNEVDKGC 56
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ + G + + Y+ + AL GR EA +++ M G P+ IT+ +I
Sbjct: 57 --KLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIK 114
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLCK G E A V+DEM + G +PD++ T+L+ C VD A F +++ +
Sbjct: 115 GLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTP 174
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
DA + +++G R+ A ++++++ + P TF ++ L A L A
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAA-GMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEF 233
Query: 537 LRLMKKQNYPP 547
M + P
Sbjct: 234 FDSMPQTGVSP 244
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 115/267 (43%), Gaps = 40/267 (14%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK--------------- 420
Y+ + L K GR +A + GF P +TYS VI GLC+
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 421 --------------------AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
GR ++A ++L+ M NGC P++ T+ ++I+G C E++
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A +M+++ + D ++ VL++ RV+ A+ + + + P T+ T+
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAW-FFFQQVLLIGFTPDAVTYNTM 182
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKE 576
++ L A RLE A +L+L+ + P F V +SK G + A EF ++
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 577 YPSSAAYLQVFESFFNEGRHYEAKDLL 603
P++ Y + + G+ A LL
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLL 269
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 86/191 (45%), Gaps = 5/191 (2%)
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ +I GLCKAGR DA + + G P + T++ +I G C NEVD+ +
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M + +A + L+N L Q R A+ LL M P TF +I+ L
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAAN-GCPPELITFGLIIKGLCKEG 120
Query: 529 RLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYL 584
+E A ++ M + + P E + + + G V++A F + L + P + Y
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 585 QVFESFFNEGR 595
+ + + GR
Sbjct: 181 TMVDGLYKAGR 191
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 168/428 (39%), Gaps = 34/428 (7%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F PS Y+ + L + L M C TY SI+ L KA + ++
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTE-- 701
Query: 185 ALNQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTVL- 239
AL F E+ +V L+D + + D+ + LE M + D ++L
Sbjct: 702 ALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILI 761
Query: 240 ----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
RI L F + E G K + YN ++ + ++EEMK
Sbjct: 762 NGLCDAGRID--TGLELFCGMAER-GCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTH 818
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC------SLLLRSISSI 349
G + T+ + + +++AV F + +DC + L+ S+ +
Sbjct: 819 GIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI--------PEDCRDEISYNTLITSLVAS 870
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+ L A + G S Y + L K G + A K+++ M++ G PD
Sbjct: 871 RRSEQALELLRAMVAD--GGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLR 928
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I GL KA + AC+ +EM PD ++ LI C A++VD A + +
Sbjct: 929 TYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDA---WKLL 985
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + +++ + + A +++ EM K P + +L + R
Sbjct: 986 RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK-NCEPGIHIWTSLATAYVAEGR 1044
Query: 530 LEEAMNLL 537
++EA+ L+
Sbjct: 1045 VDEAVKLV 1052
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 144/307 (46%), Gaps = 9/307 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TYN ++ L R V + + +M G+E + TY I + K M+ DA
Sbjct: 360 GLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDA 419
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKS--VYD 377
++ + + +KP L+ +PD + VF+ + LG L S VY+
Sbjct: 420 NRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFK-----DGLGKGLRPSIIVYN 474
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + L + G A ++M M G +PD TY+ +I GLCK G DA +++ +
Sbjct: 475 TLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK 534
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GCIPDI T+ L+ G+C ++D A+ +M + D + L+NG +
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++ M EK P T+ T+IE L ++++ EA++LL MK + P F I+
Sbjct: 595 MEIFKAMTEK-GCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLIT 653
Query: 558 KFGTVED 564
F V D
Sbjct: 654 GFCKVGD 660
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 42/363 (11%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P +A+ F+ G G + + I YN +++ L + + ++ EM ++G + DI TY
Sbjct: 451 PDQAMAVFK-DGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYN 509
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
I K + DA L + D K + D I + N
Sbjct: 510 LIINGLCKMGCLSDANHL---IGDAITKGCIPD-------IFTYN--------------- 544
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
++ DG R L + D A +++ M + G PD ITY+ ++ GLCK + E
Sbjct: 545 --------TLVDGYCRQL----KLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+ + M E GC P+I T+ +I+ C + +V+ A+ +M K D LI
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
GF ++GAY L M ++ + AT+ +I ++ A+ L MKK
Sbjct: 653 TGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712
Query: 546 PPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I F G V +FL K + PS + +V E + EA
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVG 772
Query: 602 LLY 604
+++
Sbjct: 773 IIH 775
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 141/348 (40%), Gaps = 52/348 (14%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----L 354
D+ T+ K+ K + ++ +LF+ ++ P++ ++ ++ + + D L
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLL 353
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
G V R + + + Y+ + L + R EAE+ + M N GFEP++ TY+ +
Sbjct: 354 GCVSREGLRPDVV-------TYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I G CK G DA +L + G PD T+ L+ G C + D+A+ F + K
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP--WQA----------------- 515
+ + LI G Q + A +L+ EM EK +P W
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEK-GCKPDIWTYNLIINGLCKMGCLSDAN 525
Query: 516 ----------------TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
T+ TL++ +L+ A+ L+ M Q P + +
Sbjct: 526 HLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGL 585
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
K E+ E KA++ K P+ Y + ES N + EA DLL
Sbjct: 586 CKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLL 633
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 142/343 (41%), Gaps = 16/343 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID-TYIKISRQFQKFRMMED 319
G+KH TY +L+ L H + N++ EM+ ++ Y++ R + + +++
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLLEGVYVEAMRFYGRKGKIQE 173
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVYD 377
AV FE M PSV + ++ + N + R+ +K + VY
Sbjct: 174 AVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDK------KVESDVYT 227
Query: 378 GIHR--ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
R + + GR A ++++ M G + + Y V+ G + G + A + DEM
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E PD+ T+ L+ C V + F K++++ + ++ I G + ++
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +LL + + LRP T+ T+I L R+ EA L M + P +
Sbjct: 348 RAVRLL-GCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
I + G V DA+ LK K + P Y + F +G
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDG 449
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 101/244 (41%), Gaps = 5/244 (2%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+L N+L + VY R + G+ EA + M +P +Y+ ++ L + G F
Sbjct: 148 NLDNTLLEGVYVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFN 207
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A V M++ D+ T+TI I+ C AL M ++A ++
Sbjct: 208 QAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVV 267
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
GF + A +L EM+E L P TF L+ L + E+ L + K+
Sbjct: 268 TGFYEFGDNDRARELFDEMLECC-LCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGV 326
Query: 546 PP--FP-EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P F F+Q + K G+++ A L +S + P Y V + R EA++
Sbjct: 327 CPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEE 386
Query: 602 LLYK 605
L+K
Sbjct: 387 CLHK 390
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 160/364 (43%), Gaps = 14/364 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FR + E+ G N +TYN +L L R+ + + + +++EM++ G + D +Y +
Sbjct: 96 AYKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 154
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
K ++ A+K+FE +G P V S L+ + D +E +
Sbjct: 155 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLD-----EACKLFEKMR 209
Query: 368 GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
NS V + + L K R EA+++++ M++ P+ ITYS +I GLCK G+
Sbjct: 210 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 269
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA V M G P++ T+ LI G C N VD ALL +M D + LI
Sbjct: 270 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 329
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G R A +L +M K P T+ LI R++ A L M KQ
Sbjct: 330 DGLCKTGRAPEANRLFGDMKAKF-CNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAV 388
Query: 546 PPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P F + + G V+DA L+ + + P Y + + F GR EA+
Sbjct: 389 LPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 448
Query: 602 LLYK 605
+L +
Sbjct: 449 VLKR 452
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 131/287 (45%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TYN ++ + V + +++EMK+ G ++ TY + F + ++ A
Sbjct: 37 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 96
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M++ P++ + LL + N + + + ++ G K YD +
Sbjct: 97 YKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEAYELLDEMRERGLQPDKFSYDTLM 154
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G+ D A K+ + N PD + YS +I GLCK GR ++AC + ++M EN C
Sbjct: 155 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCE 214
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ G C + + A M ++N + LI+G +V A ++
Sbjct: 215 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 274
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
MI + + P T+ +LI ++ A+ L+ M P
Sbjct: 275 FKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 320
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 150/349 (42%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN ++ V ++EEM G DI TY + K +A
Sbjct: 282 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 341
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLS-KSVYDG 378
+LF M P V S L+ + D+ +F K L + ++ ++ +G
Sbjct: 342 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEG 401
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
A G D+AE++++ M + PD TY+ ++ G CK GR +A VL M + G
Sbjct: 402 YCNA----GLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRG 457
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P++ T+T LI C A + A +M+ + LI GF + A
Sbjct: 458 CQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEAR 517
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
K+L + + ++ +++ L R+ A+ LL +K+ PP + +V I
Sbjct: 518 KMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRG 577
Query: 559 FGTVED---ASEFLK--ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
++ A E L+ LS K P++ AY V + EGRH EA L
Sbjct: 578 LCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 626
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 206/490 (42%), Gaps = 21/490 (4%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P+ YS ++ + + + R+M E+ C TY ++L G+ +
Sbjct: 75 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 134
Query: 186 LNQFH------DGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
L++ D + M + KT +D+ L D+ G D + + +
Sbjct: 135 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD--VVAYSTLIAGL 192
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
K R+ +A F + E+S + + +T+ ++ L + + +++ V+E M+
Sbjct: 193 CKTGRLD--EACKLFEKMRENS-CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 249
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ TY + K + DA ++F+ M+ +P+V + L+ N D L+
Sbjct: 250 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 309
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ + G Y+ + L K GR EA ++ MK PD ITYS +I G
Sbjct: 310 --MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK R + A + D+M + +PD+ T++ L++G+C A VD A +M+ + D
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
L++GF R+ A ++L M ++ +P T+ LI+ A + A LL
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKR-GCQPNVVTYTALIDAFCRAGKPTVAYKLLE 486
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA--AYLQVFESFFNE 593
M P + I F G +E+A + L+ L E + AY + +
Sbjct: 487 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRT 546
Query: 594 GRHYEAKDLL 603
GR A +LL
Sbjct: 547 GRMSAALELL 556
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 146/345 (42%), Gaps = 9/345 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ N IT+ ++ L + + + +MKK+G + TY + F K + A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHR 381
L + M + P+V S ++ D +FR + + N ++ Y+ +
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVT---YNTLLS 120
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + G DEA +++ M+ G +PD +Y ++ GLCK G+ + A V ++ C P
Sbjct: 121 GLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ ++ LI G C +D A F KM E + + D L++G R+ A ++L
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
E +E P T+ +LI+ L ++ +A + + M + P + I F
Sbjct: 241 -ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCM 299
Query: 560 -GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
V+ A ++ ++ P Y + + GR EA L
Sbjct: 300 TNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRL 344
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
E + IT++ +I GLCKA R +A +M++ G +P+ T+ +LI G C ++V RA L
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYL 63
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M E + +I+GF Q +V+ AYKL +M+E + P T+ TL+ L
Sbjct: 64 LLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCM-PNLVTYNTLLSGL 122
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVKEYPSS- 580
++EA LL M+++ P + + + K G ++ A + + S + P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYK 605
AY + GR EA L K
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEK 207
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 105/226 (46%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K R EA MK G P+ TY+ +I G CK + A +L EM+E+G P
Sbjct: 16 GLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAP 75
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ T++ +I G C +VD A F +M+E + + L++G ++ AY+LL
Sbjct: 76 NVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELL 135
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---K 558
EM E+ L+P + ++ TL+ L +++ A+ + + PP + I+ K
Sbjct: 136 DEMRER-GLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCK 194
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G +++A + + + P + + + R EA+ +L
Sbjct: 195 TGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 65/134 (48%), Gaps = 4/134 (2%)
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C ++ TWTI+I G C AN + A FAKM +K + +VLINGF +V+ AY
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
LL EM E L P T+ T+I +++ A L R M + P + +S
Sbjct: 63 LLLKEMKES-GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 559 F---GTVEDASEFL 569
G +++A E L
Sbjct: 122 LCRNGLMDEAYELL 135
>gi|449464322|ref|XP_004149878.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Cucumis sativus]
Length = 760
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 179/409 (43%), Gaps = 44/409 (10%)
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ + K + ++ +W ++ + + + N V VL + AL FFRWV
Sbjct: 89 EKLEKIICKMMANREWTTRLQNSIRSLVPQFDHNLVYNVLHAAK-KSEHALNFFRWVERA 147
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
++H+ T+ I+ +L R + ++ +M +G + D D ++ + + K ++++
Sbjct: 148 GLFQHDRETHFKIIEILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQE 207
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AVK+F+ K + LG S YD +
Sbjct: 208 AVKIFQ-------------------------------------KMKELGVERSVKSYDAL 230
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + + GR+ A++ AM N G EP TY+ +++G + R E A ++M+ G
Sbjct: 231 FKEIMRRGRYMMAKRYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGI 290
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ +I G+C ++ A F +M KN +I G++S R + A +
Sbjct: 291 SPDVVTYNTMINGYCRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALR 350
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYIS- 557
L EM + +P T+ TL+ L A +L EA +L M +++ P F++ +S
Sbjct: 351 LFEEM-KAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSC 409
Query: 558 --KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
K G ++ A LKA+ P+ A + + E+ G + +A LL
Sbjct: 410 QCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLL 458
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 118/568 (20%), Positives = 215/568 (37%), Gaps = 122/568 (21%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
+W+ L+N + L P+ H ++VY + E A FF WV F+ + ++
Sbjct: 103 EWTTRLQNSIRSLVPQFDH-NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKII 161
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
L L L M +E+ ++ ++ KA + + Q +KE
Sbjct: 162 EILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQ----KMKE 217
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ ++ K+ +D + + + ++ + +L E I P++
Sbjct: 218 LGVERSVKS---------YDALFKEIMRRGRYMMAKRYFNAMLNE-GIEPIR-------- 259
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
+ +N + + L + R E+ + F+ E+MK G D+ TY + + +F+M
Sbjct: 260 -----HTYNVMLWGFFLSL--RLETAKRFY---EDMKSRGISPDVVTYNTMINGYCRFKM 309
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
ME+A + F M P+V + +++ S++
Sbjct: 310 MEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVS-------------------------- 343
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
R D+A ++ + MK AG +P++ITYS ++ GLC A + +A +L EM
Sbjct: 344 -----------RADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVT 392
Query: 437 NGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
P D + L+ C ++D A+ M+ + +A +LI +
Sbjct: 393 RHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYD 452
Query: 496 GAYKLLVEMIEK-VRLRPWQATFK-----------------------TLIEKLLGARRLE 531
A KLL ++EK + LRP Q+T + T +LL +
Sbjct: 453 QAVKLLENLVEKEIILRP-QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQD 511
Query: 532 EAM--NLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY------------ 577
E NL+R K+ P ++ + + G DA + L +K Y
Sbjct: 512 EVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESY--KLLIKSYLSKGEPADAKTA 569
Query: 578 ----------PSSAAYLQVFESFFNEGR 595
P SA + V ES F +GR
Sbjct: 570 LDSMIENGHSPDSALFRSVMESLFADGR 597
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + R K G D A +M+K M G D +Y +I G DA LD M
Sbjct: 514 AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM 573
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
ENG PD + +++ A V A M++K + DL+
Sbjct: 574 IENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLV 620
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 169/383 (44%), Gaps = 16/383 (4%)
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
+LSIL + + +S+ A +G+ D V + DVV S D + L +
Sbjct: 136 FLSILAASDEDQGSSEQEAAASNPEGV------DRVCAAIADVV-ASGADANLEAALSAL 188
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
L + VL VL + + FFRW G+ H TITY +L +L +
Sbjct: 189 SPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQFESMV 248
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+++EM K G + +D + + F +++AV +FE M + V+ + LL ++
Sbjct: 249 AMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVAL 307
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ GL ++ + S + Y + A EA ++ M G
Sbjct: 308 AK-----EGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGM 362
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+PD + ++ +I GL + R +A + + M+ G P++ T+T+LI+ HC ++D A+
Sbjct: 363 DPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAME 422
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
CF +M E D L+ G+ + K+++ +L EM +K P T+ LI+ L
Sbjct: 423 CFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQK-GCPPDARTYNALIKLL 481
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
++A + + M K+ P
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEP 504
>gi|255660898|gb|ACU25618.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 484
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKZGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 117/460 (25%), Positives = 200/460 (43%), Gaps = 49/460 (10%)
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK----DSLKQFWV 150
E ++ LR+ DP+ A N ++ F P VY ++R L D +K
Sbjct: 44 QEELLTALRE-QPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVT 102
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
+RR E + +GV+ ++ A F D A+D V L D +
Sbjct: 103 EMRR----------EGHQVRVGVVHSFLES--YARQQLFVD------AVDLVLNQL-DPL 143
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
G D + L ++ +E S +L TV E+ GE G K + +T+
Sbjct: 144 FGIQADTVVYNHLLNVLVEGSKMKLLETVYSEM--------------GER-GIKPDVVTF 188
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +++ L R VR ++EEM G D T+ + + F + ++ A+++ M++
Sbjct: 189 NTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLE 248
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLSKSVYDGIHRALTKL 386
P+ ++L+ + + L + +AN +E + Y+ L +
Sbjct: 249 MGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEP-----DQITYNTFVNGLCQN 303
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G A K+M M G +PD TY+ V+ LCK G+ E+A +L++M E GC+PDI T+
Sbjct: 304 GHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI C+ N ++ AL ++ K D ++LIN A +L EM +
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEM-K 422
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
P + T+ TLI+ L +L +A++LL+ M+ P
Sbjct: 423 SSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 166/350 (47%), Gaps = 13/350 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++ + ITYN + L ++ V V++ M +EG++ D+ TY + K +E+
Sbjct: 284 NGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + M++ P + + L+ ++ S N + L +A + G S ++ +
Sbjct: 344 AKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEAL--DLARQVTLKGLSPDVYTFNIL 401
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K+G A ++ + MK++G PD +TY+ +I LC G+ A ++L EME GC
Sbjct: 402 INALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGC 461
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
T+ +I G C ++ A F +M + +A + LI+G KR++ A +
Sbjct: 462 PRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQ 521
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY---- 555
L+ +MI + L+P T+ +++ +++A ++L+ M F V Y
Sbjct: 522 LISQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILQTMTANG---FEVDVVTYGTLI 577
Query: 556 --ISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
+ K G + A + L+ + +K ++ AY V +S F +A +L
Sbjct: 578 NGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNL 627
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 163/421 (38%), Gaps = 51/421 (12%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV-VEEMK 293
+LT L+E + P AL + Y I+R L D V V EM+
Sbjct: 47 LLTALRE-QPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMR 105
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKL------------------------------ 323
+EG+++ + + + ++ DAV L
Sbjct: 106 REGHQVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSK 165
Query: 324 -------FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ M + KP V + L++++ + ++ + + S G + ++ +
Sbjct: 166 MKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVL--MLEEMSSSGVAPDETTF 223
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + G A ++ M G P +T + +I G CK GR EDA + +
Sbjct: 224 TTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIA 283
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NG PD T+ + G C V AL M+++ +D D ++++N ++
Sbjct: 284 NGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEE 343
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L +M+E+ L P TF TLI L RLEEA++L R + + P F I
Sbjct: 344 AKGILNQMVERGCL-PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILI 402
Query: 557 SKFGTVEDASEFLKAL----SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-----CP 607
+ V D L+ S P Y + ++ + G+ +A DLL + CP
Sbjct: 403 NALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCP 462
Query: 608 H 608
Sbjct: 463 R 463
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 175/467 (37%), Gaps = 56/467 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P T ++ +++ V + S+K RM E C + T ++ K + D AL
Sbjct: 218 PDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVED--AL 275
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---------NFVLT 237
+ D + T V G + +G L+ M + + + N V+
Sbjct: 276 GYIQQEIANGFEPDQI--TYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVN 333
Query: 238 VL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L K ++ K G + E G + T+N ++ L + + ++ ++ +G
Sbjct: 334 CLCKNGQLEEAK--GILNQMVER-GCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKG 390
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D+ T+ + K + A++LFE M P + L+ ++ S+ LG
Sbjct: 391 LSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGK--LGK 448
Query: 357 VFRVANKYESLGNSLSKSVYD-------------------------GIHR---------- 381
+ + ES G S Y+ GI R
Sbjct: 449 ALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 508
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K R D+A +++ M + G +P+NITY+ ++ CK G + A ++L M NG
Sbjct: 509 GLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEV 568
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI G C A AL M K A + +I + A L
Sbjct: 569 DVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLF 628
Query: 502 VEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM E V P T+K + L G + EA + L M + + P
Sbjct: 629 REMTE-VGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIP 674
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 168/407 (41%), Gaps = 50/407 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ L L++ L +M E C + T+ +++ L + + AL
Sbjct: 323 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE--AL 380
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL-EDMKI------ELSDNFVLTVL 239
+ +K ++ D ++ L D ++ +L E+MK E++ N ++ L
Sbjct: 381 DLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNL 440
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
L KAL + + E +G +T+TYN I+ L + + + V ++M +G
Sbjct: 441 CSLGKLG-KALDLLKEM-ESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 498
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
+ T+ + K + ++DA +L M+ +P
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMISEGLQP------------------------- 533
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
N+++ Y+ I K G +A +++ M GFE D +TY +I GLC
Sbjct: 534 ---------NNIT---YNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLC 581
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KAGR + A +L M G K + +IQ N A+ F +M E DA
Sbjct: 582 KAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAF 641
Query: 480 LLDVLINGFL-SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ G + A+ L+EM++K + P ++F+ L E LL
Sbjct: 642 TYKIVFRGLCRGGGSIREAFDFLLEMVDKGFI-PEFSSFRMLAEGLL 687
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 131/580 (22%), Positives = 233/580 (40%), Gaps = 88/580 (15%)
Query: 87 EELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLK 146
+E+ + VV LR + D AS +F + + K F+ + Y +M+ L + +
Sbjct: 38 QEIKTPIKESDVVMRLRT-ETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVD 96
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT- 205
L++MK + E+ +++++ ++ A AL F+ ++E K
Sbjct: 97 GVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQ--ALKMFYR--IREFGCQPTVKIY 152
Query: 206 --LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
L+D +L + I +MK G +
Sbjct: 153 NHLLDAMLSENRFQMIEPIYSNMK-------------------------------RDGKE 181
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA--- 320
N TYN +L+ L ++ V ++ EM +G E D+ +Y + K +E+A
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL 241
Query: 321 -------VKLFEFMMDG---PYK-----------------PSVQDCSLLLRSISSINNPD 353
V ++ +++G YK P+V S ++ S+S I N +
Sbjct: 242 SIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVE 301
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L V K G S + + + + GR EA + M GFEP+ + Y+
Sbjct: 302 LALA--VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNT 359
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GLC G+ +A +V +ME NGC P++ T+ LI G A ++ A + KMM
Sbjct: 360 LIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNG 419
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + ++N + A+ L +E + P TF T I+ L + R+E A
Sbjct: 420 CIPNVVVYTSMVNVLCRSSMFSQAWSL-IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECA 478
Query: 534 MNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYP-SSAAYLQVFES 589
+NL M++ P + + + + K +++A E + + K + Y +F
Sbjct: 479 INLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGG 538
Query: 590 FFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
F N G+ EA LL K +L G K + +T
Sbjct: 539 FCNVGKFEEALKLLGK------------MLVGGVKPDAIT 566
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 122/277 (44%), Gaps = 3/277 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N T+ +++ V + N+ M +EG+E ++ Y + M +A
Sbjct: 314 GCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEA 373
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + M P+V L+ + DL + NK + G + VY +
Sbjct: 374 VSVSSKMERNGCSPNVSTYGALIDGFAKAG--DLVGASEIWNKMMTNGCIPNVVVYTSMV 431
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + F +A +++ M P+ +T++ I GLC +GR E A N+ +ME+ GC
Sbjct: 432 NVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCS 491
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+IKT+ ++ G N + AL +M EK + + + + GF + + A KL
Sbjct: 492 PNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKL 551
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
L +M+ ++P T+ TL +++ A+ LL
Sbjct: 552 LGKMLVG-GVKPDAITYNTLTYAYCMQGKVKTAIQLL 587
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 106/232 (45%), Gaps = 3/232 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N + Y ++ VL R W+++E+M + + T+ + +E
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVEC 477
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ LF M P+++ + +L + N L + + E G L+ Y+ I
Sbjct: 478 AINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEAL--ELVTEMEEKGMELNLVTYNTI 535
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG- 438
+G+F+EA K++ M G +PD ITY+ + + C G+ + A +LD++ G
Sbjct: 536 FGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGK 595
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+P++ +T L+ G C V+ A+L KM+ + +A + L+ G +
Sbjct: 596 WVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNALVRGLFN 647
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 137/296 (46%), Gaps = 9/296 (3%)
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+R ++AL + + E G++ N + YN ++ L H + + +V +M++ G ++
Sbjct: 331 MRGRVLEALNIWNRMAEE-GFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNV 389
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFR 359
TY + F K + A +++ MM P+V + ++ + SS+ + L+ +
Sbjct: 390 STYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEK 449
Query: 360 VANKYESLGNSLSKSV-YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ S N +V ++ + L GR + A + M+ G P+ TY++V+ GL
Sbjct: 450 M-----STDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGL 504
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
K R ++A ++ EMEE G ++ T+ + G C + + AL KM+ DA
Sbjct: 505 LKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDA 564
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ L + Q +V A +LL ++ + P A + +L+ + +EEA+
Sbjct: 565 ITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV 620
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + I+YN ++ +H + + + +M G E + TY I F K MM++A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDG 378
K+ M + P S L+ + N+ D+ V YE++ S+ Y+
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLC--NDGDMNRAMAVF--YEAMEKGFKHSIILYNT 396
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + L+K G +A ++MK M G PD TY+ V+ GLCK G DA +L++ G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIPDI T+ LI G+C +D+A+ M+ D + L+NG ++++
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M+EK P T+ LIE R++ EAM L + MK + P
Sbjct: 517 DTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 203/459 (44%), Gaps = 24/459 (5%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
L PK V V+R NDP A FN V + F+ + Y M+ L +
Sbjct: 5 LQPK----HVAAVIR-YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAM 59
Query: 149 WVTLRRMKED-HCYIEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
L M+++ + E Y+ I+ G K ++A ++ F+D + + +
Sbjct: 60 EDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMN 119
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV-LKELRIY--PVKALGFFRWVGEHSG 261
LV+ S K+ +++D+ I D + T+ +K I P AL + G
Sbjct: 120 ILVEYGYFSQA-HKVYMRMKDIGI-YPDVYTHTIRMKSFCITGRPTAALRLLNNM-PGQG 176
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N ++Y ++ + + +++ +EM K+G DI T+ K+ K ++++
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSV--YDG 378
KLF +M P++ ++ ++ + G + A ES+ L+ V Y+
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCR-----KGAIDEAARLLESIVSEGLTPDVISYNT 291
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K + EAE + M N+G EP+ TY+ +I G CKAG ++A +L + G
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IPD T++ LI G C +++RA+ F + MEK + L + L+ G Q V A
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+L+ +M+E P T+ ++ L L +A +L
Sbjct: 412 QLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 12/367 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE-GYEMDIDTY 304
P+ AL F V G+KH TY ++ L H +V+ EM+K +M Y
Sbjct: 20 PLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVY 79
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
I I R + + +++AV +FE M +PSVQ + ++ + + +V +
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL--VEYGYFSQAHKVYMRM 137
Query: 365 ESLGNSLSKSVYDGIHR--ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ +G + VY R + GR A +++ M G E + ++Y VI G K
Sbjct: 138 KDIG--IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A ++ DEM + G PDI T+ LI C V + F+K+M++ + +
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ I G + ++ A +LL E I L P ++ TLI +L EA L M
Sbjct: 256 IFIQGLCRKGAIDEAARLL-ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 543 QNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
P + I+ F G +++A + L+ K + P Y + N+G
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 599 AKDLLYK 605
A + Y+
Sbjct: 375 AMAVFYE 381
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 41/325 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ F + G+KH+ I YN +++ L++ V ++++M + G DI TY +
Sbjct: 374 RAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + DA + D K + D I + N
Sbjct: 433 VNGLCKMGCLSDANGILN---DAIAKGCIPD-------IFTFN----------------- 465
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
++ DG K D+A +++ M + G PD ITY+ ++ GLCKA + ++
Sbjct: 466 ------TLIDG----YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ M E GC P+I T+ ILI+ C +V A+ F +M + D L LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
S ++ AY+L V + ++ + A F +I + A L M + P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 548 FPEPF---VQYISKFGTVEDASEFL 569
+ + K G ++ A FL
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFL 660
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 145/369 (39%), Gaps = 40/369 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D D +A A F + +K F+ S +Y+ +++ L + + Q ++ M E C +
Sbjct: 369 DGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIW 427
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLE 224
TY ++ L K SD + +D + K D TL+D G + K +E
Sbjct: 428 TYNLVVNGLCKMGCLSDANGI--LNDAIAKGCIPDIFTFNTLID---GYCKQRNMDKAIE 482
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ LS G + ITYN +L L + + +
Sbjct: 483 ILDTMLS----------------------------HGITPDVITYNTLLNGLCKARKLDN 514
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ + M ++G +I TY + F K R + +A++LF+ M P + L+
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574
Query: 345 SISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ S D L + +Y+ S S ++++ + A + AEK+ M +
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKF---SYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
PDN TY +I CK G + A L E G +P T ++ C + + A
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 463 LLCFAKMME 471
++ M++
Sbjct: 692 VVIINLMVQ 700
>gi|255660890|gb|ACU25614.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 484
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKQGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMVRLSVPTEAGHYGVLIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +TYN +L+ L R W V +EM G D+ ++ + F + +E+A
Sbjct: 160 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 219
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+++ M KP + S L+ + D + + + G +Y +
Sbjct: 220 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY--LREMRCFGLVPDGVIYTMVI 277
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G +A ++ M G PD +TY+ ++ GLCK R DA +L+EM E G
Sbjct: 278 GGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVP 337
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI G+C ++D+AL F M+ + D + LI+G Q ++ A L
Sbjct: 338 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 397
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M + + P T+ LI+ ++E+A L M + P + I +
Sbjct: 398 WDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 456
Query: 560 --GTVEDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G V +FL+ + V K P Y + + E + ++A LL
Sbjct: 457 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 503
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 160/381 (41%), Gaps = 20/381 (5%)
Query: 238 VLKELRIYPVKALGFFRWVGE------------HSGYKHNTITYNGILRVLARHESVRDF 285
V ++R + + GF R VGE H G K + ++++ ++ + AR +
Sbjct: 196 VAPDVRSFTILIGGFCR-VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 254
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ EM+ G D Y + F + +M DA+++ + M+ P V + LL
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ L + N+ G + + G+ D+A ++ M N
Sbjct: 315 LCKERR--LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 372
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G+C+ G + A ++ D+M P+ T++ILI HC +V+ A
Sbjct: 373 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 432
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M+ K + + +I G+ V+ K L +M+ ++ P T+ TLI +
Sbjct: 433 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN-KVSPDLITYNTLIHGYI 491
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSA 581
++ +A LL +M+K+ P + I+ F G V++A + + K P
Sbjct: 492 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 551
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y+ + G EA L
Sbjct: 552 TYMSMINGHVTAGNSKEAFQL 572
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 38/256 (14%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G + A ++ +M + G +P +TY+ V+ GLC++G ++ A V EM++ G PD++
Sbjct: 142 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 201
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE- 503
++TILI G C E++ AL + +M + D LI F + +++ A L E
Sbjct: 202 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 261
Query: 504 ------------------------MIEKVRLR---------PWQATFKTLIEKLLGARRL 530
M + +R+R P T+ TL+ L RRL
Sbjct: 262 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 321
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYLQV 586
+A LL M+++ PP F I + G ++ A + F L+ + P Y +
Sbjct: 322 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 381
Query: 587 FESFFNEGRHYEAKDL 602
+ +G +A DL
Sbjct: 382 IDGMCRQGDLDKANDL 397
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 182/464 (39%), Gaps = 59/464 (12%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
P + +V+ R D E A A + + K +P Y+ +L+ L + W
Sbjct: 128 PDVVTHNVMVDARFRAGDAEAAMALVDSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWE 186
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDV 209
+ M + + ++ ++G + + + AL + + + I D V+ L+ +
Sbjct: 187 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE--ALKIYKEMRHRGIKPDLVSFSCLIGL 244
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR-------------WV 256
D L +M+ ++ + IY + GF R V
Sbjct: 245 FARRGKMDHAMAYLREMR-------CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 297
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G G + +TYN +L L + + D ++ EM++ G D+ T+ + +
Sbjct: 298 G--CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 355
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG----------LVF-------- 358
++ A++LF+ M++ +P + + L+ + + D +F
Sbjct: 356 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 415
Query: 359 ---------RVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+V + + L ++K + Y+ I + + G + +K ++ M
Sbjct: 416 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 475
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD ITY+ +I G K + DA +L+ ME+ PD+ T+ +LI G V A
Sbjct: 476 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 535
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
F KM K + D +ING ++ A++L EM+++
Sbjct: 536 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 579
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 2/174 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ ++ V D + ++EM +G +I TY I + + + + K
Sbjct: 409 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 468
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ MM P + + L+ I + F++ N E Y+ + +
Sbjct: 469 QKMMVNKVSPDLITYNTLIHGY--IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 526
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
G EA + + M G EPD TY +I G AG ++A + DEM + G
Sbjct: 527 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRG 580
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +TYN +L+ L R W V +EM G D+ ++ + F + +E+A
Sbjct: 221 GLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEA 280
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+++ M KP + S L+ + D + + + G +Y +
Sbjct: 281 LKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAY--LREMRCFGLVPDGVIYTMVI 338
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G +A ++ M G PD +TY+ ++ GLCK R DA +L+EM E G
Sbjct: 339 GGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVP 398
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI G+C ++D+AL F M+ + D + LI+G Q ++ A L
Sbjct: 399 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 458
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M + + P T+ LI+ ++E+A L M + P + I +
Sbjct: 459 WDDMHSR-EIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYC 517
Query: 560 --GTVEDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G V +FL+ + V K P Y + + E + ++A LL
Sbjct: 518 RSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLL 564
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 159/378 (42%), Gaps = 20/378 (5%)
Query: 238 VLKELRIYPVKALGFFRWVGE------------HSGYKHNTITYNGILRVLARHESVRDF 285
V ++R + + GF R VGE H G K + ++++ ++ + AR +
Sbjct: 257 VAPDVRSFTILIGGFCR-VGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHA 315
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ EM+ G D Y + F + +M DA+++ + M+ P V + LL
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ L + N+ G + + G+ D+A ++ M N
Sbjct: 376 LCKERR--LLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLR 433
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G+C+ G + A ++ D+M P+ T++ILI HC +V+ A
Sbjct: 434 PDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGF 493
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M+ K + + +I G+ V+ K L +M+ ++ P T+ TLI +
Sbjct: 494 LDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVN-KVSPDLITYNTLIHGYI 552
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSA 581
++ +A LL +M+K+ P + I+ F G V++A + + K P
Sbjct: 553 KEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRY 612
Query: 582 AYLQVFESFFNEGRHYEA 599
Y+ + G EA
Sbjct: 613 TYMSMINGHVTAGNSKEA 630
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 113/256 (44%), Gaps = 38/256 (14%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G + A ++ +M + G +P +TY+ V+ GLC++G ++ A V EM++ G PD++
Sbjct: 203 RAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVR 262
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE- 503
++TILI G C E++ AL + +M + D LI F + +++ A L E
Sbjct: 263 SFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREM 322
Query: 504 ------------------------MIEKVRLR---------PWQATFKTLIEKLLGARRL 530
M + +R+R P T+ TL+ L RRL
Sbjct: 323 RCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRL 382
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYLQV 586
+A LL M+++ PP F I + G ++ A + F L+ + P Y +
Sbjct: 383 LDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTL 442
Query: 587 FESFFNEGRHYEAKDL 602
+ +G +A DL
Sbjct: 443 IDGMCRQGDLDKANDL 458
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/464 (19%), Positives = 182/464 (39%), Gaps = 59/464 (12%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
P + +V+ R D E A A + + K +P Y+ +L+ L + W
Sbjct: 189 PDVVTHNVMVDARFRAGDAEAAMALVDSMV-SKGLKPGIVTYNSVLKGLCRSGMWDKAWE 247
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDV 209
+ M + + ++ ++G + + + AL + + + I D V+ L+ +
Sbjct: 248 VFKEMDDFGVAPDVRSFTILIGGFCRVGEIEE--ALKIYKEMRHRGIKPDLVSFSCLIGL 305
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR-------------WV 256
D L +M+ ++ + IY + GF R V
Sbjct: 306 FARRGKMDHAMAYLREMR-------CFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMV 358
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G G + +TYN +L L + + D ++ EM++ G D+ T+ + +
Sbjct: 359 G--CGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGK 416
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG----------LVF-------- 358
++ A++LF+ M++ +P + + L+ + + D +F
Sbjct: 417 LDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSI 476
Query: 359 ---------RVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+V + + L ++K + Y+ I + + G + +K ++ M
Sbjct: 477 LIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNK 536
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD ITY+ +I G K + DA +L+ ME+ PD+ T+ +LI G V A
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
F KM K + D +ING ++ A++L EM+++
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 96/220 (43%), Gaps = 12/220 (5%)
Query: 263 KHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+ + +TYN ++ + R + D W+ + +E + + I I +K ++ ED
Sbjct: 433 RPDIVTYNTLIDGMCRQGDLDKANDLWD--DMHSREIFPNHVTYSILIDSHCEKGQV-ED 489
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YD 377
A + M++ P++ + +++ N G F + + N +S + Y+
Sbjct: 490 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL----QKMMVNKVSPDLITYN 545
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K + +A K++ M+ +PD +TY+ +I G G ++A + ++M
Sbjct: 546 TLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAK 605
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
G PD T+ +I GH A A +M+++ + D
Sbjct: 606 GIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 2/180 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ ++ V D + ++EM +G +I TY I + + + + K
Sbjct: 470 NHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFL 529
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ MM P + + L+ I + F++ N E Y+ + +
Sbjct: 530 QKMMVNKVSPDLITYNTLIHGY--IKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 587
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G EA + + M G EPD TY +I G AG ++A + DEM + G PD K
Sbjct: 588 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSRXITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ A +L EM + ++P T+ TL+ L A ++ EA + L+ M + P
Sbjct: 231 VSVDRVDDALRLXEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ L+A+ P+ A + V E++ G++ +A +LL
Sbjct: 290 DNSIFLRLISGQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 163/347 (46%), Gaps = 10/347 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N TY ++ L + ++ +M ++G ++ TY + + K M+
Sbjct: 350 EEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-NPDLGLVFRVANKYESLGNSLSKSVY 376
EDA+ + E M +P+ + + L++ N + +G++ ++ + S+
Sbjct: 410 EDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
DG R+ G FD A +++ M + G PD TY+ +I LCK+ R E+AC++ D +E+
Sbjct: 470 DGQCRS----GNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
IP++ +T LI G+C A +V+ A L KM+ KN ++ + LI+G + ++
Sbjct: 526 KDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKE 585
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL E + K+ L+P +T LI +LL + A + M P + +I
Sbjct: 586 A-TLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+ G ++DA + + + P Y + + + + GR A
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSA 691
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/394 (23%), Positives = 168/394 (42%), Gaps = 39/394 (9%)
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH-----------------ESVRD 284
L + P AL F W+ ++ YKH+ +Y +L +L + +SV D
Sbjct: 99 LDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVAD 158
Query: 285 FWNVVEEMKKEG--------YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
V++ +K Y++ I Y + +F ++++ +++ M++ P++
Sbjct: 159 TLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNI 218
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESL----GNSLSKSVYDGIHRALTKLGRFDEA 392
+ ++ + N AN+Y S+ G Y + + D A
Sbjct: 219 YTYNKMVNGYCKVGN------VEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSA 272
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
K+ K M G + + Y+ +I GLC R ++A ++ +M+++ C P ++T+T+LI+
Sbjct: 273 FKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKA 332
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + AL +M EK + VLI+ SQ ++ A +LL +M+EK L P
Sbjct: 333 LCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEK-GLMP 391
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG--TVEDASEFL- 569
T+ LI +E+A++++ LM+ +N P + + I + V A L
Sbjct: 392 NVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVLN 451
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K L K P Y + + G A LL
Sbjct: 452 KMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 104/474 (21%), Positives = 176/474 (37%), Gaps = 108/474 (22%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K R + Y+ ++ L + + + +MK+D CY TY ++ L +++ S+
Sbjct: 282 KGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSE 341
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
ALN +VKE+ + + + I K+E + + +L++
Sbjct: 342 --ALN-----LVKEMEEKGIKPNI------HTYTVLIDSLCSQCKLEKARELLGQMLEK- 387
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
G N ITYN ++ + + D +VVE M+ +
Sbjct: 388 ------------------GLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTR 429
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL-------------RSISSI 349
TY ++ + + K R + A+ + M++ P V + L+ R +S +
Sbjct: 430 TYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLM 488
Query: 350 NNPDLGLVFRVANKYESLGNSLSKS-----------------------VYDGIHRALTKL 386
N D GLV Y S+ +SL KS +Y + K
Sbjct: 489 N--DRGLVPDPWT-YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKA 545
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC--------------------------- 419
G+ +EA M++ M + P+++T++ +I GLC
Sbjct: 546 GKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTD 605
Query: 420 --------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
K G F+ A +M +G PD T+T IQ +C + A AKM E
Sbjct: 606 TILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKE 665
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
D LI G+ R N A+ +L M P Q TF +LI+ LL
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM-HDTGCEPSQHTFLSLIKHLL 718
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 15/144 (10%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
IHR L K G FD A + + M ++G +PD TY+ I C+ GR +DA +++ +M+ENG
Sbjct: 609 IHR-LLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK--RVNG 496
PD+ T++ LI+G+ + A + +M + + LI L K +V G
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727
Query: 497 A------------YKLLVEMIEKV 508
+ ++VE++EK+
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKM 751
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/280 (21%), Positives = 116/280 (41%), Gaps = 18/280 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + TY ++ R ++D ++V +MK+ G D+ TY + + +
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNS 690
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSI----------------NNPDLGLVFRVANK 363
A + + M D +PS L++ + + N + +V + K
Sbjct: 691 AFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEK 750
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFEPDNITYSQVIFGLCKAG 422
G + + Y+ + + ++G AEK+ M+ G P + ++ ++ CK
Sbjct: 751 MVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLE 810
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ +A V+D+M G +P +++ ILI E +R F +++ Y D
Sbjct: 811 KHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWK 870
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++I+G Q V Y+L ++EK T+ LIE
Sbjct: 871 IIIDGVGKQGLVEAFYELF-NVMEKNGCTFSSQTYSLLIE 909
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 203/487 (41%), Gaps = 77/487 (15%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL 183
+ +P+ +++++ + LKQ +M+E E TY ++ L KA+ S
Sbjct: 2 ECQPTVVTWTIIIDGFCKANQLKQALACFEKMRE-FVAPNERTYNVVVNGLCKARLTSKA 60
Query: 184 -AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
L + DG K +A D V T V+ G ++ + E +L+E+
Sbjct: 61 YEVLKEMRDG--KSVAPDLV--TYSTVINGFCKQGEMDRACE-------------ILREM 103
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
G + +TY ++ L R + +V EMK +G E D
Sbjct: 104 VT--------------RDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKF 149
Query: 303 TYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
T+ + + R +++A+KL+ E + +KP V
Sbjct: 150 TFSALITGWCNARKVDEALKLYKEILTSSSWKPDVV------------------------ 185
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
Y +L + KS G ++A KM+ M+ P+ +TYS ++ GLCKA
Sbjct: 186 -TYTALIDGFCKS------------GNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 232
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G + A ++ M GC+P++ T+T LI G CAA++VD A L +M D
Sbjct: 233 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY 292
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ L++G+ R+ A +L EM K L P + T+ L+ A RLEEA LL MK
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMK 351
Query: 542 -KQNYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
P + ++ + + +A+EF++ + + P++ Y + + GR
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411
Query: 597 YEAKDLL 603
A ++L
Sbjct: 412 DHAMEVL 418
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 73/373 (19%), Positives = 140/373 (37%), Gaps = 45/373 (12%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA V + ++ P+ YS +L L L Q RRM C TY +
Sbjct: 201 EKAMKMLG-VMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTT 259
Query: 170 ILGVLKKAKKAS----------------DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
++ L A K D + N DG + ++ + ++ S
Sbjct: 260 LIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKS 319
Query: 214 DWDDKI-----------GKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFR------- 254
D+I +LE+ + L + + ++ Y + G+ R
Sbjct: 320 CLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 379
Query: 255 --WVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
++ E N +TY+ ++ L + V V++ M + E + T+ +
Sbjct: 380 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGA 439
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRV----ANKYE 365
+ M++A KL M +P + + LL S ++ +F V A K
Sbjct: 440 LCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSS 499
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S N + + + + R L K D+A +++ +++ EP ++ GL +AGR E
Sbjct: 500 SAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTE 559
Query: 426 DACNVLDEMEENG 438
+A +++ + + G
Sbjct: 560 EAGKLINSISKVG 572
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L + S+ + +N+ EM+ +G++ DI TY + F
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D KL M+ P+V S+L+ S
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDS-------------------------------- 342
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
K G+ EA++++K M G P+ ITY+ +I G CK R E+A ++D M
Sbjct: 343 -----FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PDI T+ ILI G+C AN +D L F +M + A+ + L+ GF ++ A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
KL EM+ + R+RP ++K L++ L LE+A+ + ++K
Sbjct: 458 KKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
I +N + +A+ + + ++M+ +G I T + F + R + A
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE------SLGNSLSKSVYDGI 379
+M Y+P + LL L L RV+ E +G+ + + +
Sbjct: 148 KIMKLGYEPDTVIFNTLLNG--------LCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L G+ +A ++ M GF+P+ +TY V+ +CK+G+ A +L +MEE
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D ++I+I G C +D A F +M K + AD + LI GF + R + K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LL +MI++ ++ P TF LI+ + +L EA LL+ M ++ P + I F
Sbjct: 320 LLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL--------------------- 356
+DAV LF M+ P+V D + L +I+ +L L
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 357 ------------VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
F K LG +++ + L R EA +++ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+P IT + ++ GLC G+ DA ++D M E G P+ T+ ++ C + + A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA---TFKTLI 521
KM E+N DA ++I+G ++ A+ L EM ++ ++A T+ TLI
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM----EIKGFKADIITYNTLI 305
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY- 577
A R ++ LLR M K+ P F I F G + +A + LK + +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 578 PSSAAYLQVFESFFNEGRHYEA 599
P++ Y + + F E R EA
Sbjct: 366 PNTITYNSLIDGFCKENRLEEA 387
>gi|255660886|gb|ACU25612.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 484
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNXIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 167/382 (43%), Gaps = 38/382 (9%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + +TY+ +L + R +++EM+ +G E DI TY + ++
Sbjct: 279 HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 338
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSIS---------------SINN--PD-------- 353
+A+ + + KP + +L+S+ + NN PD
Sbjct: 339 EALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIV 398
Query: 354 -----LGLVFR---VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
GLV R V + G Y I L +GR D+A +++ +K+ G +
Sbjct: 399 TSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 458
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD I Y+ V+ GLC ++E A ++ EM + C PD T+ ++ C VDRA+
Sbjct: 459 PDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M E D + +I+G ++ ++ A +LL ++ + +P TF TL++ L
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL-QSCGCKPDIVTFNTLLKGLC 577
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSA 581
G R E+A L+ M + N PP F I+ G + A E LK ++ P+S+
Sbjct: 578 GVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSS 637
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y V ++ G+ A +LL
Sbjct: 638 TYSIVVDALLKAGKAQAALELL 659
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/359 (23%), Positives = 157/359 (43%), Gaps = 8/359 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL + H G K + +TY +L+ L E ++ ++ EM D T+ I
Sbjct: 339 EALNILSNLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ +++ A+++ + M + + S +L + + D + + ++ +S
Sbjct: 398 VTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV--ELLSRLKSY 455
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G Y + + L +++ AE++M M + PD +T++ V+ LC+ G + A
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRA 515
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V+++M ENGC PDI T+ +I G C + +D A+ + + D + L+ G
Sbjct: 516 IRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
R A +L+ M+ + P + TF T+I L L +A+ L++M + P
Sbjct: 576 LCGVDRWEDAEQLMANMM-RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVP 634
Query: 548 FPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ V + K G + A E L ++ P Y V + G+ EA DLL
Sbjct: 635 NSSTYSIVVDALLKAGKAQAALELLSGMT-NGTPDLITYNTVISNLTKAGKMEEALDLL 692
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 140/305 (45%), Gaps = 19/305 (6%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYK--PSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
R + +++A+ LF+ M G + P V C++L++ + S G V + +
Sbjct: 158 RSLVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSD-----GRVSDAERVFAA 212
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S + Y+ + + GR ++A +++ M F PD T++ +I LC GR D
Sbjct: 213 LGPSATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPD 269
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V D+M GC P + T++IL+ C + +A+ +M K + D +VLIN
Sbjct: 270 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLIN 329
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
++ V+ A +L + +P T+ +++ L G+ R +E LL M N
Sbjct: 330 AMCNEGDVDEALNILSNLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCA 388
Query: 547 PFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSA---AYLQVFESFFNEGRHYEAK 600
P F V + + G V+ A E + +S E+ A Y + + + GR +A
Sbjct: 389 PDEVTFNTIVTSLCQQGLVDRAIEVVDHMS--EHGCVADIVTYSSILDGLCDVGRVDDAV 446
Query: 601 DLLYK 605
+LL +
Sbjct: 447 ELLSR 451
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/435 (22%), Positives = 180/435 (41%), Gaps = 22/435 (5%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ PS YS++L + +Q L M+ C + TY ++ + +
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLV-DVVLGSDWDDKIGKKLEDMKI------ELSDNFV 235
ALN + D V T V + GS+ ++ + L +M E++ N +
Sbjct: 340 --ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTI 397
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+T L + + +A+ + EH G + +TY+ IL L V D ++ +K
Sbjct: 398 VTSLCQQGLVD-RAIEVVDHMSEH-GCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSY 455
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + D Y + + E A +L M+ P + ++ S+ G
Sbjct: 456 GCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ-----KG 510
Query: 356 LV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
LV RV + G S Y+ I L D+A +++ +++ G +PD +T++
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ GLC R+EDA ++ M + C PD T+ +I C + +A+ M E
Sbjct: 571 TLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
++ ++++ L + A +LL M P T+ T+I L A ++EE
Sbjct: 631 GCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGT---PDLITYNTVISNLTKAGKMEE 687
Query: 533 AMNLLRLMKKQNYPP 547
A++LLR+M P
Sbjct: 688 ALDLLRVMVSNGLCP 702
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 148/346 (42%), Gaps = 7/346 (2%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ +T T+N ++R L + D V ++M G + TY + K A+
Sbjct: 247 FPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAM 306
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L + M +P + ++L+ ++ N D+ + + S G Y + +
Sbjct: 307 ALLDEMRAKGCEPDIVTYNVLINAM--CNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+L R+ E E+++ M + PD +T++ ++ LC+ G + A V+D M E+GC+
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DI T++ ++ G C VD A+ +++ D ++ G S ++ A +L+
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
EM+ P + TF T++ L ++ A+ ++ M + P + + +
Sbjct: 485 AEMLCS-DCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543
Query: 559 FGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
++DA E L L S P + + + R +A+ L+
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLM 589
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 187/462 (40%), Gaps = 67/462 (14%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKAKK 179
+P + Y+ +L++L + K+ L M ++C +E T+ +I+ G++ +A +
Sbjct: 353 KPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIE 412
Query: 180 ASDLAALNQFHDGMVKEIAM-DNVAKTLVDVVLGSDWDDKIG--KKLEDMKIELSDNFVL 236
D + G V +I ++ L DV DD + +L+ +
Sbjct: 413 VVD----HMSEHGCVADIVTYSSILDGLCDV---GRVDDAVELLSRLKSYGCKPDTIAYT 465
Query: 237 TVLKELRIYPVKALGFFRW------VGEH--SGYKHNTITYNGILRVLARHESVRDFWNV 288
TVLK L +W + E S + +T+N ++ L + V V
Sbjct: 466 TVLKGL-------CSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
VE+M + G DI TY I ++DA++L + KP + + LL+ +
Sbjct: 519 VEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCG 578
Query: 349 I----------------NNPDLGLVFR-----------VANKYESL------GNSLSKSV 375
+ N P L F + E+L G + S
Sbjct: 579 VDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSST 638
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + AL K G+ A +++ M N PD ITY+ VI L KAG+ E+A ++L M
Sbjct: 639 YSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRVMV 696
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
NG PD T+ L G C + DRA+ ++ + D + ++ GF +R +
Sbjct: 697 SNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTD 756
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A M+ + P ++T+ L+E L L+EA LL
Sbjct: 757 LAIDCFAHMVSSGCM-PDESTYVILLEALAYGGLLDEAKRLL 797
>gi|115474201|ref|NP_001060699.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|33146488|dbj|BAC79597.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|50509161|dbj|BAD30301.1| membrane-associated salt-inducible protein-like [Oryza sativa
Japonica Group]
gi|113612235|dbj|BAF22613.1| Os07g0688100 [Oryza sativa Japonica Group]
gi|215678726|dbj|BAG95163.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222637719|gb|EEE67851.1| hypothetical protein OsJ_25651 [Oryza sativa Japonica Group]
Length = 665
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 142/627 (22%), Positives = 250/627 (39%), Gaps = 65/627 (10%)
Query: 17 LLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINT------CQ--KIFFSTSPNS 68
L+ R S + L TR+ +S +S Q ++ C+ ++F +
Sbjct: 2 FLATRPSGSSSLITRLCVLHTVSWIVSSRQVARFSTGVDNANPGAHCRLSELFRPVRTET 61
Query: 69 SLELI---LACD-WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ 124
S +I L C WS+ +E +LE L +L V VLR L D A F+ W +
Sbjct: 62 SCVIIGRALECGRWSESVELELEGLHVELDPFVVNKVLRGLL-DSGMAVRFYWWAESRPG 120
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F ++ + ++ L D+ L R++ Y +L +A K
Sbjct: 121 FYHNNFAIAYIISLLFVDDNFALLSEFLGRVRSQGVAFHRSLYRVLLAGYARAGK----- 175
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVV------LGSDWDDKIGKKLEDMKIELSDNFVLTV 238
D+V +T ++V G D++ IG +++ +L + +
Sbjct: 176 --------------FDSVIETFDEMVTSGCREFGVDYNRFIGVMIKNCCFDLVEKYYNMA 221
Query: 239 LKELRIYPVKALGFFRWVG------------------EHSGYKHNTITYNGILRVLARHE 280
L + + + + RW+ + G + N + L H
Sbjct: 222 LA--KGFCLTPFTYSRWITALCQSNRIELVEELLTDMDKFGCFPDFWACNIYVHYLCGHN 279
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
+ D +VE+M +G D+ TY + R +AV L+E M+ KP V C
Sbjct: 280 RLYDALQMVEKMTMKGTGPDVVTYTTVVSCLCDHRRFSEAVGLWEEMVRRGLKPDVVACG 339
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L+ + N + F +A++ +L L+ S+Y+ + + G ++A K + M+
Sbjct: 340 ALIFGLCK--NQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKAYKTVSFMQ 397
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G EPD +TY+ ++ C G + A N++ +ME +G PD ++ IL++G C A+++D
Sbjct: 398 RNGCEPDVVTYNILLNHYCSIGMTDKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLD 457
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+A + ME D ++LI+ F K+VN A L EM K ++ T+ L
Sbjct: 458 KAFAFVSDHMEVGGFCDIVSCNILIDAFCRAKKVNSALNLFKEMGYK-GIQADAVTYGIL 516
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY 577
I L G A L M P + + + K G + A + ++ KE
Sbjct: 517 INGLFGIGYSNLAEELFDQMLNTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEV 576
Query: 578 -PSSAAYLQVFESFFNEGRHYEAKDLL 603
P + + + R EA DL
Sbjct: 577 SPDTVTFNTLIYWLGKSSRAVEALDLF 603
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 73/339 (21%), Positives = 137/339 (40%), Gaps = 42/339 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + + ++ L +++ V + + + M ++++ Y + F + +E A
Sbjct: 330 GLKPDVVACGALIFGLCKNQKVDEAFELASRMLTLDIQLNVSIYNALISGFWRAGSIEKA 389
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K FM +P V ++LL N Y S+G +
Sbjct: 390 YKTVSFMQRNGCEPDVVTYNILL------------------NHYCSIGMT---------- 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
D+AE +++ M+ +G PD +Y+ ++ GLCKA + + A + + E G
Sbjct: 422 ---------DKAENLIRKMEMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF 472
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
DI + ILI C A +V+ AL F +M K ADA +LING N A +L
Sbjct: 473 CDIVSCNILIDAFCRAKKVNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLAEEL 532
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+M+ ++ P + ++ L + A + M ++ P F + ++
Sbjct: 533 FDQML-NTKIVPNVNVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLG 591
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
K +A + K + K P + + + +EG+
Sbjct: 592 KSSRAVEALDLFKEMRTKGVEPDNLTFRYIISGLLDEGK 630
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 258 EHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + +YN +L+ L + H+ + F V + M+ G+ DI + + F + +
Sbjct: 432 EMSGVNPDRYSYNILLKGLCKAHQLDKAFAFVSDHMEVGGF-CDIVSCNILIDAFCRAKK 490
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSK 373
+ A+ LF+ M + +L+ + I +L ++ + N+ +
Sbjct: 491 VNSALNLFKEMGYKGIQADAVTYGILINGLFGIGYSNLA-----EELFDQMLNTKIVPNV 545
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+VY+ + L K+G F A+K+ M PD +T++ +I+ L K+ R +A ++ E
Sbjct: 546 NVYNIMLHNLCKVGHFKHAQKIFWQMTQKEVSPDTVTFNTLIYWLGKSSRAVEALDLFKE 605
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
M G PD T+ +I G + A + MME D D+ + LI+
Sbjct: 606 MRTKGVEPDNLTFRYIISGLLDEGKATLAYEIWEYMMENGIILDRDVSERLIS 658
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 134/289 (46%), Gaps = 7/289 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + I+YN ++ +H + + + +M G E + TY I F K MM++A
Sbjct: 281 GLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNA 340
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDG 378
K+ M + P S L+ + N+ D+ V YE++ S+ Y+
Sbjct: 341 DKILRDAMFKGFIPDEFTYSSLINGLC--NDGDMNRAMAVF--YEAMEKGFKHSIILYNT 396
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + L+K G +A ++MK M G PD TY+ V+ GLCK G DA +L++ G
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIPDI T+ LI G+C +D+A+ M+ D + L+NG ++++
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M+EK P T+ LIE R++ EAM L + MK + P
Sbjct: 517 DTFKAMLEK-GCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTP 564
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 113/459 (24%), Positives = 203/459 (44%), Gaps = 24/459 (5%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
L PK V V+R NDP A FN V + F+ + Y M+ L +
Sbjct: 5 LQPK----HVAAVIR-YQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAM 59
Query: 149 WVTLRRMKED-HCYIEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
L M+++ + E Y+ I+ G K ++A ++ F+D + + +
Sbjct: 60 EDVLAEMRKNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMN 119
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV-LKELRIY--PVKALGFFRWVGEHSG 261
LV+ S K+ +++D+ I D + T+ +K I P AL + G
Sbjct: 120 ILVEYGYFSQA-HKVYMRMKDIGI-YPDVYTHTIRMKSFCITGRPTAALRLLNNM-PGQG 176
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N ++Y ++ + + +++ +EM K+G DI T+ K+ K ++++
Sbjct: 177 CEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESE 236
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSV--YDG 378
KLF +M P++ ++ ++ + G + A ES+ L+ V Y+
Sbjct: 237 KLFSKVMKRGVCPNLFTFNIFIQGLCR-----KGAIDEAARLLESIVSEGLTPDVISYNT 291
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K + EAE + M N+G EP+ TY+ +I G CKAG ++A +L + G
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IPD T++ LI G C +++RA+ F + MEK + L + L+ G Q V A
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+L+ +M+E P T+ ++ L L +A +L
Sbjct: 412 QLMKDMMEH-GCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 156/367 (42%), Gaps = 12/367 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE-GYEMDIDTY 304
P+ AL F V G+KH TY ++ L H +V+ EM+K +M Y
Sbjct: 20 PLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVY 79
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
I I R + + +++AV +FE M +PSVQ + ++ + + +V +
Sbjct: 80 IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNIL--VEYGYFSQAHKVYMRM 137
Query: 365 ESLGNSLSKSVYDGIHR--ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ +G + VY R + GR A +++ M G E + ++Y VI G K
Sbjct: 138 KDIG--IYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKEN 195
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A ++ DEM + G PDI T+ LI C V + F+K+M++ + +
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ I G + ++ A +LL E I L P ++ TLI +L EA L M
Sbjct: 256 IFIQGLCRKGAIDEAARLL-ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVN 314
Query: 543 QNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
P + I+ F G +++A + L+ K + P Y + N+G
Sbjct: 315 SGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNR 374
Query: 599 AKDLLYK 605
A + Y+
Sbjct: 375 AMAVFYE 381
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 133/325 (40%), Gaps = 41/325 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ F + G+KH+ I YN +++ L++ V ++++M + G DI TY +
Sbjct: 374 RAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + DA + D K + D I + N
Sbjct: 433 VNGLCKMGCLSDANGILN---DAIAKGCIPD-------IFTFN----------------- 465
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
++ DG K D+A +++ M + G PD ITY+ ++ GLCKA + ++
Sbjct: 466 ------TLIDG----YCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNV 515
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ M E GC P+I T+ ILI+ C +V A+ F +M + D L LI G
Sbjct: 516 VDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICG 575
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
S ++ AY+L V + ++ + A F +I + A L M + P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635
Query: 548 FPEPF---VQYISKFGTVEDASEFL 569
+ + K G ++ A FL
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFL 660
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 81/369 (21%), Positives = 144/369 (39%), Gaps = 40/369 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D D +A A F + +K F+ S +Y+ +++ L + + Q ++ M E C +
Sbjct: 369 DGDMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIW 427
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLE 224
TY ++ L K SD + +D + K D TL+D G + K +E
Sbjct: 428 TYNLVVNGLCKMGCLSDANGI--LNDAIAKGCIPDIFTFNTLID---GYCKQRNMDKAIE 482
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ LS G + ITYN +L L + + +
Sbjct: 483 ILDTMLS----------------------------HGITPDVITYNTLLNGLCKARKLDN 514
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ + M ++G +I TY + F K R + +A++LF+ M P + L+
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLIC 574
Query: 345 SISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ S D L + +Y+ S S ++++ + A AEK+ M +
Sbjct: 575 GLCSNGELDKAYELFVTIEKEYKF---SYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
PDN TY +I CK G + A L E G +P T ++ C + + A
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 463 LLCFAKMME 471
++ M++
Sbjct: 692 VVIINLMVQ 700
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 134/302 (44%), Gaps = 4/302 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +TY ++ L + + + + + +EM G +D Y + R+ + +
Sbjct: 50 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQ 109
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A +++ M P V S ++ +S +G R+ E+ G + ++ VY +
Sbjct: 110 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGR--IGAAVRIFKSMEARGLAPNEVVYSAL 167
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K + D A +M+ MK A PD ITY+ +I GLCK+G E A DEM E GC
Sbjct: 168 IHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC 227
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGFLSQKRVNGAY 498
PD+ T+ ILI G C A D A A+ N D +++ K++ A
Sbjct: 228 KPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAV 287
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
L+ E I P AT+ L+ L RLEEA++LLR + P + I
Sbjct: 288 ALM-EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 346
Query: 559 FG 560
G
Sbjct: 347 LG 348
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 166/394 (42%), Gaps = 40/394 (10%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV---NKDSLKQFWVTLRRMKEDHCYIE 163
D E A AFF+ + + +P Y++++ N D+ + + C I+
Sbjct: 210 GDVEAARAFFDEMLEA-GCKPDVYTYNILISGFCKAGNTDAASHSLA--QETTINGCTID 266
Query: 164 EETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL 223
TY +I+ L K KK + AL +++I + T+ + K+G+ L
Sbjct: 267 IHTYTAIVDWLAKNKKIEEAVAL-------MEKITANGCTPTIATYNALLNGLCKMGR-L 318
Query: 224 EDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
E+ A+ R + ++ G + +TY ++ L + +
Sbjct: 319 EE-----------------------AIDLLRKIVDN-GCTPDVVTYTSLIDGLGKEKRSF 354
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + + +EM G +D Y + R+ + + A +++ M P V S ++
Sbjct: 355 EAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMI 414
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+S +G R+ E+ G + ++ VY + L K + D A +M+ MK A
Sbjct: 415 DGLSKAGR--IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD ITY+ +I GLCK+G E A DEM E GC PD+ T+ ILI G C A D A
Sbjct: 473 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 532
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
F M A+ LI+G ++++ A
Sbjct: 533 GVFDDMSSSRCSANVVTYGALISGLCKRRQLTKA 566
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 158/349 (45%), Gaps = 10/349 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G TYN +L L + + + +++ ++ G D+ TY + K + +
Sbjct: 15 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE 74
Query: 320 AVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-VYD 377
A KLF E + G +V +L+ + + P V++ + + + ++ S + D
Sbjct: 75 AYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMID 134
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G L+K GR A ++ K+M+ G P+ + YS +I GLCKA + + A +L +M++
Sbjct: 135 G----LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PD T+ +LI G C + +V+ A F +M+E D ++LI+GF + A
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
L + T+ +++ L +++EEA+ L+ + P + +
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 555 YISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G +E+A + L K + P Y + + E R +EA L
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 208/518 (40%), Gaps = 60/518 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+ +L L L++ LR++ ++ C + TY S++ L K K++ + A
Sbjct: 19 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFE--AY 76
Query: 187 NQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL------ 239
F + ++ +A+D V T L+ +L + KI + K S V V+
Sbjct: 77 KLFKEMALRGLALDTVCYTALIRELLQTG---KIPQASSVYKTMTSHGCVPDVVTLSTMI 133
Query: 240 ----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
K RI A+ F+ + E G N + Y+ ++ L + + ++ +MKK
Sbjct: 134 DGLSKAGRIGA--AVRIFKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
D TY + K +E A F+ M++ KP V ++L+ N D
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+A + G ++ Y I L K + +EA +M+ + G P TY+ ++
Sbjct: 251 -SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALL 309
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH---------------------- 453
GLCK GR E+A ++L ++ +NGC PD+ T+T LI G
Sbjct: 310 NGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLA 369
Query: 454 ----C---------AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
C ++ +A + M D L +I+G R+ A ++
Sbjct: 370 LDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRI 429
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
M E L P + + LI L AR+++ A+ +L MKK P + + +
Sbjct: 430 FKSM-EARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLC 488
Query: 558 KFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
K G VE A F + L P Y + F G
Sbjct: 489 KSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 136/332 (40%), Gaps = 14/332 (4%)
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+ + ++E++ G I TY + K +E+A+ L ++D P V +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 342 LLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
L+ + F ++ + G +L Y + R L + G+ +A + K
Sbjct: 62 LIDGLGKEKRS-----FEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKT 116
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + G PD +T S +I GL KAGR A + ME G P+ ++ LI G C A +
Sbjct: 117 MTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARK 176
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D AL A+M + D +VLI+G V A EM+E +P T+
Sbjct: 177 MDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLE-AGCKPDVYTYN 235
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFP----EPFVQYISKFGTVEDASEFLKALSV 574
LI A + A + L N V +++K +E+A ++ ++
Sbjct: 236 ILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITA 295
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
P+ A Y + GR EA DLL K
Sbjct: 296 NGCTPTIATYNALLNGLCKMGRLEEAIDLLRK 327
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 106/269 (39%), Gaps = 47/269 (17%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ +EA +M+ + G P TY+ ++ GLCK GR E+A ++L ++ +NGC PD+ T+T
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 448 ILIQGH--------------------------C---------AANEVDRALLCFAKMMEK 472
LI G C ++ +A + M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D L +I+G R+ A ++ M E L P + + LI L AR+++
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCKARKMDC 179
Query: 533 AMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFE 588
A+ +L MKK P + + + K G VE A F + L P Y +
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239
Query: 589 SFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
F G A H + Q++ I+
Sbjct: 240 GFCKAGNTDAAS-------HSLAQETTIN 261
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/447 (23%), Positives = 203/447 (45%), Gaps = 36/447 (8%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY--PVKALGFFRWVGEH 259
AKT+ +++ + + + L + I +S TVL+ LR+ P KAL FF+W +
Sbjct: 51 TAKTIANLINSKPFSNGL---LSSLLITISKT---TVLRTLRLIKDPSKALRFFKWT-QQ 103
Query: 260 SGYKHNTITYNGILRVLARHESV---RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G+ H +Y +L +L R ++ R+F +E+ K +++ + + R + + +
Sbjct: 104 KGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGL 163
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL----GNSLS 372
++++KLF+ M PSV + L+ + ++ Y+ + G S
Sbjct: 164 FKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMA-----KEVYDEMLGTYGVSPD 218
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ + R K DE + + M++ + D +TY+ ++ GLC+AG+ A N+++
Sbjct: 219 TCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVN 278
Query: 433 EMEEN--GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
M + G P++ T+T LI+G+C EV+ AL+ +M + + + L+ G
Sbjct: 279 GMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCE 338
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+++ +L M P TF T+I A L+EA+ + MKK P
Sbjct: 339 AHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSA 398
Query: 551 PF---VQYISKFGTVEDASEFLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEA 599
+ ++ + + G + A + L KE P +A+Y +FES G+ +A
Sbjct: 399 SYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKA 458
Query: 600 KDLLYKCPHHIRQD--SKISLLFGSAK 624
+ ++ + QD S +++ G K
Sbjct: 459 ERVIRQLMKRGTQDPQSYTTVIMGHCK 485
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 126/580 (21%), Positives = 223/580 (38%), Gaps = 114/580 (19%)
Query: 89 LSPKLTHESVVYVLR--KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL- 145
LS L S VLR +L DP KA FF W +K F + Y +ML L + +L
Sbjct: 69 LSSLLITISKTTVLRTLRLIKDPSKALRFFKWT-QQKGFSHTPESYFIMLEILGRERNLN 127
Query: 146 --KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
+ F ++ + + +E+ + S++ A F + M M ++A
Sbjct: 128 VARNFLFSIEKHSKGTVKLEDRFFNSLI---------RSYAEAGLFKESMKLFQTMKSIA 178
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT--VLKELRIYPVKALGF--------- 252
+ V S + + +M E+ D + T V + Y V GF
Sbjct: 179 VSPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEG 238
Query: 253 FRWVGEHSGYK--HNTITYNGILRVLARHESVRDFWNVVEEMKK--EGYEMDIDTYIKIS 308
FR+ E + + +TYN ++ L R VR N+V M K EG ++ TY +
Sbjct: 239 FRFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLI 298
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R + + +E+A+ + E M KP++ + L++ + + D ++ + E +
Sbjct: 299 RGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLD-----KMKDVLERMK 353
Query: 368 ---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G S ++ I G DEA K+ ++MK D+ +YS +I LC+ G +
Sbjct: 354 SDGGFSPDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDY 413
Query: 425 EDACNVLDEMEEN-------GCIP----------------------------------DI 443
+ A + DE+ E G P D
Sbjct: 414 DMAEQLFDELFEKEILLSKFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRGTQDP 473
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+++T +I GHC + M+ +++ D ++ D LI+GFL + + A + L +
Sbjct: 474 QSYTTVIMGHCKEGAYESGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEK 533
Query: 504 MIE---KVRLRPWQATFKTLIEK-------------------------------LLGARR 529
M++ + + W + L+EK L G +
Sbjct: 534 MLKSSYQPKTSTWHSVLAKLLEKGCAHESSCVIVMMLEKNVRQNINLSTESLQLLFGREQ 593
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL 569
E A ++ L+ K Y E Q++ K G + +A + L
Sbjct: 594 HERAFEIINLLYKNGYYVKIEEVAQFLLKRGKLSEACKLL 633
>gi|255660916|gb|ACU25627.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 484
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRDTHLKIIEILGRALKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKAGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GRF A++ M + G EP T++ +I+G +G+ + A
Sbjct: 111 VERTIKSYDALFKVIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVLIWGFFLSGKVDTAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G ++D A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGCYRVKKMDEAEKYFVEMKGRNIEPTVVSYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ ++ K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGYGIKPNAITYSTLLPGLCDAGKMSEAQSILKEMVDKYIAPK 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS + G + A++ LKA+ P+ A + V E+F G+H +A LL
Sbjct: 290 DNSIFMRLISSQCEAGNLGAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQHDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|449507993|ref|XP_004163187.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g37230-like [Cucumis sativus]
Length = 760
Score = 118 bits (296), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 173/395 (43%), Gaps = 44/395 (11%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
+W ++ + + + N V VL + AL FFRWV ++H+ T+ I+
Sbjct: 103 EWTTRLQNSIRSLVPQFDHNLVYNVLHAAK-KSEHALNFFRWVERAGLFQHDRETHFKII 161
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+L R + ++ +M +G + D D ++ + + K ++++AVK+F+
Sbjct: 162 EILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQ-------- 213
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
K + LG S YD + + + + GR+ A+
Sbjct: 214 -----------------------------KMKELGVERSVKSYDALFKEIMRRGRYMMAK 244
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ AM N G EP TY+ +++G + R E A ++M+ G PD+ T+ +I G+
Sbjct: 245 RYFNAMLNEGIEPIRHTYNVMLWGFFLSLRLETAKRFYEDMKSRGISPDVVTYNTMINGY 304
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C ++ A F +M KN +I G++S R + A +L EM + +P
Sbjct: 305 CRFKMMEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVSRADDALRLFEEM-KAAGEKPN 363
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYIS---KFGTVEDASEFL 569
T+ TL+ L A +L EA +L M +++ P F++ +S K G ++ A L
Sbjct: 364 DITYSTLLPGLCDAEKLPEARKILTEMVTRHFAPKDNSIFMRLLSCQCKHGDLDAAMHVL 423
Query: 570 KALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
KA+ P+ A + + E+ G + +A LL
Sbjct: 424 KAMIRLSIPTEAGHYGILIENCCKAGMYDQAVKLL 458
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 118/568 (20%), Positives = 215/568 (37%), Gaps = 122/568 (21%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
+W+ L+N + L P+ H ++VY + E A FF WV F+ + ++
Sbjct: 103 EWTTRLQNSIRSLVPQFDH-NLVYNVLHAAKKSEHALNFFRWVERAGLFQHDRETHFKII 161
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
L L L M +E+ ++ ++ KA + + Q +KE
Sbjct: 162 EILGRASKLNHARCILLDMPNKGVQWDEDLFVVLIESYGKAGIVQEAVKIFQ----KMKE 217
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ ++ K+ +D + + + ++ + +L E I P++
Sbjct: 218 LGVERSVKS---------YDALFKEIMRRGRYMMAKRYFNAMLNE-GIEPIR-------- 259
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
+ +N + + L + R E+ + F+ E+MK G D+ TY + + +F+M
Sbjct: 260 -----HTYNVMLWGFFLSL--RLETAKRFY---EDMKSRGISPDVVTYNTMINGYCRFKM 309
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
ME+A + F M P+V + +++ S++
Sbjct: 310 MEEAEQFFTEMKGKNIAPTVISYTTMIKGYVSVS-------------------------- 343
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
R D+A ++ + MK AG +P++ITYS ++ GLC A + +A +L EM
Sbjct: 344 -----------RADDALRLFEEMKAAGEKPNDITYSTLLPGLCDAEKLPEARKILTEMVT 392
Query: 437 NGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
P D + L+ C ++D A+ M+ + +A +LI +
Sbjct: 393 RHFAPKDNSIFMRLLSCQCKHGDLDAAMHVLKAMIRLSIPTEAGHYGILIENCCKAGMYD 452
Query: 496 GAYKLLVEMIEK-VRLRPWQATFK-----------------------TLIEKLLGARRLE 531
A KLL ++EK + LRP Q+T + T +LL +
Sbjct: 453 QAVKLLENLVEKEIILRP-QSTLEMEASAYNLIIQYLCNHGQTGKADTFFRQLLKKGIQD 511
Query: 532 EAM--NLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY------------ 577
E NL+R K+ P ++ + + G DA + L +K Y
Sbjct: 512 EVAFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESY--KLLIKSYLSKGEPADAKTA 569
Query: 578 ----------PSSAAYLQVFESFFNEGR 595
P SA + V ES F +GR
Sbjct: 570 LDSMIENGHSPDSALFRSVMESLFADGR 597
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 45/107 (42%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + R K G D A +M+K M G D +Y +I G DA LD M
Sbjct: 514 AFNNLIRGHAKEGNPDLAFEMLKIMGRRGVSRDAESYKLLIKSYLSKGEPADAKTALDSM 573
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
ENG PD + +++ A V A M++K + DL+
Sbjct: 574 IENGHSPDSALFRSVMESLFADGRVQTASRVMNSMLDKGITENLDLV 620
>gi|255660874|gb|ACU25606.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + + E+F G++ +A LL
Sbjct: 290 DNSIFLRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGILIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660882|gb|ACU25610.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKVGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|449484944|ref|XP_004157025.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g16010-like [Cucumis sativus]
Length = 637
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 43/429 (10%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K +E +K+++ V VL ++ + + FF+W G+ ++H++ TY ++R
Sbjct: 74 WGSDAEKAIEVLKLKVDHRLVHQVL-DIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIR 132
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF---------- 324
L V + W +++M + + + +I + K +M+ A+ +F
Sbjct: 133 CLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNP 192
Query: 325 --------------------------EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
E +G P S L+ + + D F
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFA--F 250
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ ++ + G ++ +Y I KL + + A ++++ MK G P TY+++I GL
Sbjct: 251 RLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGL 310
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
K GR +DA ++ M ++GC PD+ LI A ++ AL F KM +
Sbjct: 311 GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNV 370
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +I K L E ++ + P T+ LI+ R+E+A+ LL
Sbjct: 371 VTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLE 430
Query: 539 LMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEYPSSA-AYLQVFESFFNEG 594
M ++ +PP P + I G E A+E + L SSA Y + + F N G
Sbjct: 431 EMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCG 490
Query: 595 RHYEAKDLL 603
R +A DL
Sbjct: 491 RLSDAVDLF 499
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 239/551 (43%), Gaps = 28/551 (5%)
Query: 15 NSLLSIRS-SSTRPLFTRV--THFFHISSFTASNQS-HTSQFHINTCQKIFFSTSPNSSL 70
SL S RS SS PL TR+ T + F S S S F N +K+ +L
Sbjct: 4 TSLASKRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFN--RKVLRRDPSVRTL 61
Query: 71 E-----LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQF 125
+ ++ W + E +E L K+ H V VL +D + FF W ++ F
Sbjct: 62 DERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVL-DIDVEIRAKIQFFKWAGKRQHF 120
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+ ST Y ++R L + + W T++ M C + + IL +L KAK + A
Sbjct: 121 QHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNK--A 178
Query: 186 LNQFHDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLT 237
L+ F+ ++ V TL+ +++ +KI + ++ E ++ + +++
Sbjct: 179 LSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALIS 238
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+L Y A F + E+ + I Y IL + + V +VEEMK +G
Sbjct: 239 AFGKLERYDF-AFRLFDEMKENGLHPTEKI-YTTILAMYFKLNKVEAALRLVEEMKGKGC 296
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ TY ++ + K ++DA LF M+ KP V + L+ + + L
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL- 355
Query: 358 FRVANKYESLGNSLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ K +SL + + Y+ + +A+ EA + MK G P + TY+ +I
Sbjct: 356 -KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILID 414
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK R E A +L+EM+E G P + LI A + A F ++ E +
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRS 474
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
A + V+I F + R++ A L E EK+ P T+ L+ ++ A ++EA +L
Sbjct: 475 SARVYAVMIKHFGNCGRLSDAVDLFCEX-EKLGCSPDVYTYNALMSGMIRAGMIDEAHSL 533
Query: 537 LRLMKKQNYPP 547
+R M++ P
Sbjct: 534 MRNMRENGCTP 544
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/466 (22%), Positives = 194/466 (41%), Gaps = 51/466 (10%)
Query: 85 KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
K + +P T + + ++ + EK +N +C + P + YS ++ +
Sbjct: 186 KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 245
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ MKE+ + E+ Y +IL + K K AAL +V+E+ A
Sbjct: 246 YDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVE--AALR-----LVEEMKGKGCAP 298
Query: 205 TLVDVVLGSDWDDKIGK----------KLEDM---KIELSDNFVLTVLKELRIYPVKALG 251
T+ K+G+ L+D + L +N + + + R+ AL
Sbjct: 299 TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE--DALK 356
Query: 252 FFRWVGEHSGYK--HNTITYNGILRVLARHE---SVRDFWNVVEEMKKEGYEMDIDTYIK 306
F G+ + N +TYN +++ + + S W E+MK G TY
Sbjct: 357 LF---GKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALW--FEKMKANGIAPSSFTYAI 411
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-- 364
+ F K +E A+ L E M + + P L+ S+ + AN+
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR------YEAANELFQ 465
Query: 365 ---ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
E+ G S S VY + + GR +A + + G PD TY+ ++ G+ +A
Sbjct: 466 ELKENCGRS-SARVYAVMIKHFGNCGRLSDAVDLFCEXEKLGCSPDVYTYNALMSGMIRA 524
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G ++A +++ M ENGC PDIK+ I++ G RA+ F KM E DA
Sbjct: 525 GMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDA--- 581
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ---ATFKTLIEKL 524
V N LS G +++ +++ +++L+ ++ T+ +++E +
Sbjct: 582 -VSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 153/327 (46%), Gaps = 7/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ + + S V VL V ALGFF+W +GY+H+ N ++ +L + +S
Sbjct: 115 LDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSF 174
Query: 283 RDFWNVVEEMKK--EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
++VEEM K +GY + ++T K+ R+ K R EDA++ F M +
Sbjct: 175 DPMSDLVEEMAKLEQGY-VTLETMAKVIRRLAKARKHEDAIEAFRRMDKFGVNKDTAALN 233
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
+L+ ++ + + +V +++ L LS ++ + + +FD A K M+ MK
Sbjct: 234 VLIDAL--VKGDSVEHAHKVVLEFKGL-IPLSSHSFNVLMHGWCRARKFDNARKAMEDMK 290
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
GFEPD +Y+ I C F VL+EM ENGC P+ T+T ++ A ++
Sbjct: 291 ELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEMRENGCPPNAVTYTTVMLHLGKAGQLS 350
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+AL + KM AD + +I R+ A + +M ++ +R T+ T+
Sbjct: 351 KALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVVRD-VVTYNTM 409
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I R E A+ LL+ M+ + P
Sbjct: 410 ISTACAHSREETALRLLKEMEDGSCKP 436
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 110/470 (23%), Positives = 183/470 (38%), Gaps = 53/470 (11%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L+ LS + + V VL + ND A FF W + +R S + +LM+ L S
Sbjct: 115 LDGLSFQPSSGLVSQVLNRFSNDWVPALGFFKWAKSQTGYRHSPELCNLMVDILGKCKSF 174
Query: 146 KQFWVTLRRM-KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMD 200
+ M K + Y+ ET ++ L KA+K D A+ F G+ K+ A
Sbjct: 175 DPMSDLVEEMAKLEQGYVTLETMAKVIRRLAKARKHED--AIEAFRRMDKFGVNKDTAAL 232
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
NV L+D ++ D +E + VL F+ + S
Sbjct: 233 NV---LIDALVKGD------------SVEHAHKVVLE---------------FKGLIPLS 262
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+ ++N ++ R + +E+MK+ G+E D+ +Y + R
Sbjct: 263 SH-----SFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKV 317
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ E M + P+ + ++ + L V K + G VY +
Sbjct: 318 DQVLEEMRENGCPPNAVTYTTVMLHLGKAGQ--LSKALEVYEKMKCDGCVADTPVYSCMI 375
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR +A + + M G D +TY+ +I C R E A +L EME+ C
Sbjct: 376 FILGKAGRLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCK 435
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L++ C + M + + D +L+N +V AY
Sbjct: 436 PNVGTYHPLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSF 495
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLG------ARRLEEAMNLLRLMKKQN 544
L EM+ K P +T K L +L R+EE M+ R +KQN
Sbjct: 496 LEEMVLK-GFTPKPSTLKGLAGELESLSMLEEKERVEEWMD--RFSQKQN 542
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 128/289 (44%), Gaps = 4/289 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T N ++ L + +SV VV E K + ++ + + + R ++A
Sbjct: 224 GVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGL-IPLSSHSFNVLMHGWCRARKFDNA 282
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K E M + ++P V + + + + D V +V + G + Y +
Sbjct: 283 RKAMEDMKELGFEPDVFSYTSFIEAY--CHERDFRKVDQVLEEMRENGCPPNAVTYTTVM 340
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G+ +A ++ + MK G D YS +IF L KAGR +DAC+V ++M + G +
Sbjct: 341 LHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRLKDACDVFEDMPKQGVV 400
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ T+ +I CA + + AL +M + + + L+ +K+ K
Sbjct: 401 RDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHPLLK-MCCKKKRMKVLKF 459
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
L++ + K + P AT+ L+ L ++ +A + L M + + P P
Sbjct: 460 LLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEMVLKGFTPKP 508
>gi|449467657|ref|XP_004151539.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Cucumis sativus]
Length = 637
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 177/429 (41%), Gaps = 43/429 (10%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K +E +K+++ V VL ++ + + FF+W G+ ++H++ TY ++R
Sbjct: 74 WGSDAEKAIEVLKLKVDHRLVHQVL-DIDVEIRAKIQFFKWAGKRQHFQHDSTTYMALIR 132
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF---------- 324
L V + W +++M + + + +I + K +M+ A+ +F
Sbjct: 133 CLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNKALSVFYQIKGRKCNP 192
Query: 325 --------------------------EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
E +G P S L+ + + D F
Sbjct: 193 TATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLERYDFA--F 250
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ ++ + G ++ +Y I KL + + A ++++ MK G P TY+++I GL
Sbjct: 251 RLFDEMKENGLHPTEKIYTTILAMYFKLNKVEAALRLVEEMKGKGCAPTVFTYTELIKGL 310
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
K GR +DA ++ M ++GC PD+ LI A ++ AL F KM +
Sbjct: 311 GKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDALKLFGKMDSLQCAPNV 370
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +I K L E ++ + P T+ LI+ R+E+A+ LL
Sbjct: 371 VTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILIDGFCKTNRVEKALLLLE 430
Query: 539 LMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEYPSSA-AYLQVFESFFNEG 594
M ++ +PP P + I G E A+E + L SSA Y + + F N G
Sbjct: 431 EMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRSSARVYAVMIKHFGNCG 490
Query: 595 RHYEAKDLL 603
R +A DL
Sbjct: 491 RLSDAVDLF 499
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 139/551 (25%), Positives = 240/551 (43%), Gaps = 28/551 (5%)
Query: 15 NSLLSIRS-SSTRPLFTRV--THFFHISSFTASNQS-HTSQFHINTCQKIFFSTSPNSSL 70
SL S RS SS PL TR+ T + F S S S F N +K+ +L
Sbjct: 4 TSLASKRSISSLHPLSTRIKQTENEIVQMFRVSTPSPEASNFSFN--RKVLRRDPSVRTL 61
Query: 71 E-----LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQF 125
+ ++ W + E +E L K+ H V VL +D + FF W ++ F
Sbjct: 62 DERFIRILKIFKWGSDAEKAIEVLKLKVDHRLVHQVL-DIDVEIRAKIQFFKWAGKRQHF 120
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+ ST Y ++R L + + W T++ M C + + IL +L KAK + A
Sbjct: 121 QHDSTTYMALIRCLEESGLVDEMWRTIQDMIRSPCSVGPAEWSEILKILGKAKMVNK--A 178
Query: 186 LNQFHDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLT 237
L+ F+ ++ V TL+ +++ +KI + ++ E ++ + +++
Sbjct: 179 LSVFYQIKGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALIS 238
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+L Y A F + E+ + I Y IL + + V +VEEMK +G
Sbjct: 239 AFGKLERYDF-AFRLFDEMKENGLHPTEKI-YTTILAMYFKLNKVEAALRLVEEMKGKGC 296
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ TY ++ + K ++DA LF M+ KP V + L+ + + L
Sbjct: 297 APTVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLEDAL- 355
Query: 358 FRVANKYESLGNSLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ K +SL + + Y+ + +A+ EA + MK G P + TY+ +I
Sbjct: 356 -KLFGKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALWFEKMKANGIAPSSFTYAILID 414
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK R E A +L+EM+E G P + LI A + A F ++ E +
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKRYEAANELFQELKENCGRS 474
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
A + V+I F + R++ A L EM +K+ P T+ L+ ++ A ++EA +L
Sbjct: 475 SARVYAVMIKHFGNCGRLSDAVDLFCEM-KKLGCSPDVYTYNALMSGMIRAGMIDEAHSL 533
Query: 537 LRLMKKQNYPP 547
+R M++ P
Sbjct: 534 MRNMRENGCTP 544
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 195/466 (41%), Gaps = 51/466 (10%)
Query: 85 KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
K + +P T + + ++ + EK +N +C + P + YS ++ +
Sbjct: 186 KGRKCNPTATVYNTLILMLMHEGHHEKIHELYNEICSEGNCSPDTITYSALISAFGKLER 245
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ MKE+ + E+ Y +IL + K K AAL +V+E+ A
Sbjct: 246 YDFAFRLFDEMKENGLHPTEKIYTTILAMYFKLNKVE--AALR-----LVEEMKGKGCAP 298
Query: 205 TLVDVVLGSDWDDKIGK----------KLEDM---KIELSDNFVLTVLKELRIYPVKALG 251
T+ K+G+ L+D + L +N + + + R+ AL
Sbjct: 299 TVFTYTELIKGLGKVGRVDDAYSLFFNMLKDGCKPDVVLINNLINILGRAGRLE--DALK 356
Query: 252 FFRWVGEHSGYK--HNTITYNGILRVLARHE---SVRDFWNVVEEMKKEGYEMDIDTYIK 306
F G+ + N +TYN +++ + + S W E+MK G TY
Sbjct: 357 LF---GKMDSLQCAPNVVTYNTVIKAIFESKAPASEAALW--FEKMKANGIAPSSFTYAI 411
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-- 364
+ F K +E A+ L E M + + P L+ S+ + AN+
Sbjct: 412 LIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLIDSLGRAKR------YEAANELFQ 465
Query: 365 ---ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
E+ G S S VY + + GR +A + MK G PD TY+ ++ G+ +A
Sbjct: 466 ELKENCGRS-SARVYAVMIKHFGNCGRLSDAVDLFCEMKKLGCSPDVYTYNALMSGMIRA 524
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G ++A +++ M ENGC PDIK+ I++ G RA+ F KM E DA
Sbjct: 525 GMIDEAHSLMRNMRENGCTPDIKSHNIILNGLAKTGGPKRAIEMFTKMKESEIMPDA--- 581
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ---ATFKTLIEKL 524
V N LS G +++ +++ +++L+ ++ T+ +++E +
Sbjct: 582 -VSYNTILSCLSRAGMFEMAAKLMREMKLKGFEYDSITYSSILEAV 626
>gi|255660884|gb|ACU25611.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEXIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A + EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEXMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 160/384 (41%), Gaps = 42/384 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ +L L + D + +E+ K G+ + TY I + K +A
Sbjct: 136 GLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNA 195
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L + M + KP V + ++ S+ + + F ++ G + Y I
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYF--FSEMVDQGIPPNVVTYSSIL 253
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
LG+ +EA + K M P+ +T++ ++ GLCK G +A V + M ENG
Sbjct: 254 HGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVE 313
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T++ L+ G+C +++D A F M+ K + + ++LING +R+N A L
Sbjct: 314 PDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTL 373
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARR------------------------------- 529
L EM ++ L P T+ TL++ A R
Sbjct: 374 LSEMYDR-DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432
Query: 530 ----LEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
L+EA LL+ M++ P +Q + FG +E A E L VK PS
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV 492
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK 605
Y + EG EA ++ K
Sbjct: 493 TYTVMISGLLKEGLSNEACEMFRK 516
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 99/428 (23%), Positives = 180/428 (42%), Gaps = 52/428 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K F PS Y+ +++ L L++M+E C + Y +++ L K ++A+
Sbjct: 169 KMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRAN 228
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+ F MV + NV T ++ G ++ + K + N
Sbjct: 229 EAM---YFFSEMVDQGIPPNVV-TYSSILHGFCNLGQLNEATSLFKQMIGRN-------- 276
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ P NT+T+ ++ L + + + V E M + G E D
Sbjct: 277 --VMP------------------NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDA 316
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + + M++A KLF+ M+ + PSV+ ++L+ R
Sbjct: 317 YTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKS---------RRL 367
Query: 362 NKYESLGNSL-------SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
N+ ++L + + Y + + + GR A+K+ K M + G PD+ITYS +
Sbjct: 368 NEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSIL 427
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLCK G ++A +L M+E+ P I + ILIQG C +++ A F+ + K
Sbjct: 428 LDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGI 487
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
V+I+G L + N A ++ +M+ L P T+ I+ L R +
Sbjct: 488 QPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCL-PNSCTYNVAIQGFL---RNGDPS 543
Query: 535 NLLRLMKK 542
N +RL+++
Sbjct: 544 NAVRLIEE 551
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 119/275 (43%), Gaps = 5/275 (1%)
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P+V ++L+ + N + F K LG + + + L + +A
Sbjct: 101 RPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDA 160
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
K+ + GF P ITY+ +I GLCK G +A +L +MEE GC PD+ + +I
Sbjct: 161 VKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDS 220
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + A+ F++M+++ + +++GF + ++N A L +MI + + P
Sbjct: 221 LCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGR-NVMP 279
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFL 569
TF L++ L + EA + +M + P + + + +++A +
Sbjct: 280 NTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLF 339
Query: 570 KALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K + PS Y + R EAK LL
Sbjct: 340 DIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLL 374
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 84/204 (41%), Gaps = 7/204 (3%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN--EVDRAL 463
P + +++++ L K + ++ +M+ + P++ T TILI C +N V A
Sbjct: 67 PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
KM + L+NG S+ ++ A KL E I K+ P T+ T+I+
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDE-IGKMGFAPSLITYTTIIKG 185
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPS 579
L A+ LL+ M+++ P + I A+E F + + P+
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245
Query: 580 SAAYLQVFESFFNEGRHYEAKDLL 603
Y + F N G+ EA L
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLF 269
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 80/413 (19%), Positives = 160/413 (38%), Gaps = 84/413 (20%)
Query: 81 ELENKLEELSPK---LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
+L K+EE K + + +V+ L K D +A FF+ + D+ P+ YS +L
Sbjct: 197 QLLKKMEEKGCKPDVVAYNTVIDSLCK-DRRANEAMYFFSEMVDQG-IPPNVVTYSSILH 254
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKAKKASDLAALN---- 187
N L + ++M + T+ ++ G++ +A++ ++ N
Sbjct: 255 GFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEP 314
Query: 188 ------QFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI------------GKKLEDMKIE 229
DG + MD A+ L D+++G + + ++L + K
Sbjct: 315 DAYTYSALMDGYCLQSQMDE-AQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTL 373
Query: 230 LSDNFVLTVLKELRIYPVKALGF------------FRWVGEHSGYKHNTITYNGILRVLA 277
LS+ + + + Y GF F+ + + G ++ITY+ +L L
Sbjct: 374 LSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSY-GLLPDSITYSILLDGLC 432
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+H + + + +++ M++ E I Y + + F +E A +LF + +PSV
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV 492
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
++++ L K G +EA +M +
Sbjct: 493 TYTVMI-------------------------------------SGLLKEGLSNEACEMFR 515
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
M G P++ TY+ I G + G +A +++EM G D T+ +L+
Sbjct: 516 KMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
>gi|255660880|gb|ACU25609.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 484
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 137/269 (50%), Gaps = 9/269 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQ 310
FF W + GY+H+ Y ++++ ++ W ++EEM+K+ + + +I + R+
Sbjct: 126 FFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRR 185
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F R++E A+++ + M +P LL ++ G V + A+ +E +
Sbjct: 186 FASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKN-----GSVKQAASLFEDMRVR 240
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S S+ + + + G+ EA+ ++ M+ AGFEPD + ++ ++ AG+ DA
Sbjct: 241 FSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMTDAF 300
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L EM GC P+ ++TI+IQ C+ ++D A+ F +M +AD LI+GF
Sbjct: 301 DLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALISGF 360
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++N Y++L M +K + P Q T+
Sbjct: 361 CKWGKINRGYQILDAMKQKGHM-PNQLTY 388
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/456 (20%), Positives = 182/456 (39%), Gaps = 39/456 (8%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
+LE L+E + VL + + FF W + +R S Y M++
Sbjct: 92 KLELALQESGVTMRAGLTERVLNRCGDAGNLGYRFFVWASKQPGYRHSYENYKAMVKIFS 151
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
W L M++D+ + +L +++ A + + D M K
Sbjct: 152 KMRQFGAVWALLEEMRKDNSVLITSELFIVL--IRRFASARLVEKAIEVLDEMPKYGCEP 209
Query: 201 N--VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ V L+D + + + EDM++ S + LR + G+ R
Sbjct: 210 DEYVFGCLLDALCKNGSVKQAASLFEDMRVRFSPS--------LRHFTSLLYGWCR---- 257
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G L + A+H V+ +M++ G+E DI + + + M
Sbjct: 258 -----------EGKL-IEAKH--------VLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA L + M+ +P+ ++++++ S D + RV + E G Y
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAM--RVFVEMERTGCEADVVTYTA 355
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G+ + +++ AMK G P+ +TY +++ K E+ +++ M G
Sbjct: 356 LISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVG 415
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C+PD+ + ++I+ C EV + + + +M ++ + D ++I+GFL Q + A
Sbjct: 416 CVPDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEAC 475
Query: 499 KLLVEMIEKVRL-RPWQATFKTLIEKLLGARRLEEA 533
+ EMI + L P K L+ LL +L A
Sbjct: 476 EYFKEMIGRGLLTTPQYGILKELLNALLRGEKLGMA 511
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 150/333 (45%), Gaps = 26/333 (7%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
L+ +V +L LR P AL FF+W G G++H T +Y I+ ++ R D + V
Sbjct: 127 LAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTV 186
Query: 290 EEMKKEGYEMDID----------------------TYIKISRQFQKFRMMEDAVKLFEFM 327
+E+ MD+ + + F + ++E+A + F M
Sbjct: 187 KEVIMNS-RMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM 245
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ P + C+ LL +S N L V + N G + S Y+ + L K G
Sbjct: 246 RNFRTLPKARSCNFLLHRLSKSGNGQL--VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 303
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ + ++ M+ G PD +TY+ +I G K G E+ ++ +EM++ GC+PDI T+
Sbjct: 304 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 363
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI +C ++ RA F++M + LI+ F + + GA KL V+M +
Sbjct: 364 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDM-RR 422
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L P + T+ +LI+ A L EA LL M
Sbjct: 423 TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 7/349 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYNG++ + E + + EMK G + ++ TY + F K MM+ A
Sbjct: 354 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 413
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KLF M P+ + L+ + N L +++ N G L+ Y +
Sbjct: 414 IKLFVDMRRTGLLPNEFTYTSLIDANCKAGN--LTEAWKLLNDMLQAGVKLNIVTYTALL 471
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR EAE++ ++M G P+ Y+ ++ G KA R EDA +L +M E
Sbjct: 472 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 531
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ + +I GHC+ +++ L +M + A+ + +I+ + + + A
Sbjct: 532 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 591
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---S 557
EM + V + T+ LI+ L A +E A++ M P + I
Sbjct: 592 FQEM-QDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K +E A + + + P A+ + + G EA L+ +
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISR 699
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 155/349 (44%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ + S+ + ++ EMK G DI TY + + KF M A
Sbjct: 319 GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRA 378
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ F M + KP+V S L+ + + +F + L N + Y +
Sbjct: 379 FEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT---YTSL 435
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K G EA K++ M AG + + +TY+ ++ GLCKAGR +A V M ++G
Sbjct: 436 IDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGI 495
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ + +T L+ G+ A ++ A+ +M E N D L +I G SQ+++
Sbjct: 496 SPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Query: 500 LLVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+L EM + + P +T T+I+ A + +A+N + M+ + +
Sbjct: 556 ILEEMKSRGISANPVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDG 613
Query: 556 ISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G VE A + F + LS+ P+ A Y + + AK L
Sbjct: 614 LCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 134/319 (42%), Gaps = 34/319 (10%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G K N +TY +L L + + + V M K+G + Y + + K ME
Sbjct: 457 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 516
Query: 319 DAVKLFEFMMDGPYKPSV----------------QDCSLLL-----RSISS---INNPDL 354
DA+K+ + M + KP + ++ L+L R IS+ I+ +
Sbjct: 517 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 576
Query: 355 GLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
F+ ++L G + Y + L K G + A M + G +
Sbjct: 577 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQ 636
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ Y+ +I GLCK E A + DEM+ G PDI +T LI G+ + AL+
Sbjct: 637 PNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 696
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++M E + D + L++GF ++ A K EMIEK L P + L+ +
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL-PEEVLCICLLREYY 755
Query: 526 GARRLEEAMNLLRLMKKQN 544
+L+EA+ L M++
Sbjct: 756 KRGQLDEAIELKNEMERMG 774
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+TYN ++ L + E + ++++EEM G DI TY + F K + +DA+++FE
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175
Query: 327 MMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++ ++P V S L+ + + L R+ + N+++ Y+ +
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT---YNSLISGFC 232
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
++G+ DEA +++ M G PD +TY+ ++ G CK R +DA ++L++M G PD+
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T L+ G C N + A+ +M K+ + +++G+ ++ A K M
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---M 349
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+E++ P +F +I L R EAM L+ +++ P
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 15/312 (4%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D TY + + K + +E A+ M+ + P V + ++ ++ N
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR------LH 63
Query: 360 VANKY-ESLGN-SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
A K+ E + N +L+ +V Y + L K GR DEA ++ M+ P +TY+ +I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKA R +A ++L+EM +GCIPDI T+T LI G C + + D AL F +++ + +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D LI+G + R+ A L MI+ P T+ +LI +++EAMN
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 536 LLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
LL M + P + ++ F ++DA + L ++ K P + + +
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 592 NEGRHYEAKDLL 603
E R +A +L
Sbjct: 303 RENRLSDAVHIL 314
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 113/473 (23%), Positives = 202/473 (42%), Gaps = 49/473 (10%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ +V++ L ++N +A F + ++ P+ Y++++ L + + L
Sbjct: 48 TYTAVIHAL-CVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVL 211
+M++ C TY S++ L KA++AS+ L + G + +I TL+
Sbjct: 106 KMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFC 161
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLT-------VLKELRIYPVKALGFFRWVGEHSGYKH 264
S D + E + V+T + KE R+ +A+ F + +
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK--EAIDLFGRMIKSGSCMP 219
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ R + + N++E M + G D+ TY + F K ++DA L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
M P V + L+ + N R+++ LG KS Y+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCREN--------RLSDAVHILGEMRRKSCSPTVYTYNT 331
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I + + +EA K M ++ P+ ++++ +I GLCK R +A +++E
Sbjct: 332 ILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-----NYDADADLLDVLIN-GFLSQK 492
C PD+ +T +I G C +VD A + KM+E+ N + L+ L N G L +
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA 449
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
R Y IEK + P T+ LI+ A R E+A LL M ++ +
Sbjct: 450 R---GY------IEKGCV-PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N C D T+T LIQG C +++AL+ KM+ K + D +I+ + R++
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A K L EM + L P T+ LI+ L R++EA+ LL M+K+ P + I
Sbjct: 65 ARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLI 122
Query: 557 SKFGTVEDASE 567
S E ASE
Sbjct: 123 SGLCKAERASE 133
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 155/346 (44%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T T+ ++R L + D ++ ++M EG++ ++ TY + K A
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 191
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + +K G S Y +
Sbjct: 192 IRLLRSMEQGNCQPDVVVYTSIIDSLCK--DRQVTEAFNLFSKMVGQGISPDIFTYTSLI 249
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L L + ++ M N+ PD + +S V+ LCK G+ +A +V+D M G
Sbjct: 250 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 309
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC +E+D A+ F M+ Y + + LING+ +R++ A L
Sbjct: 310 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 369
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM +K L P T+ TL+ L RL++A+ L M P + + Y+
Sbjct: 370 FEEMCQK-ELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 428
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K +++A LK + P Y V + G A+D+
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 107/512 (20%), Positives = 196/512 (38%), Gaps = 71/512 (13%)
Query: 103 RKLDNDPEKASAFFN----WVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKED 158
R L P ++ FN + KQ+ TV+SL N ++ + TL +
Sbjct: 57 RMLHMHPPPSTVDFNRLLTSIAKTKQY---PTVFSL--SNQMDSFGIPPDVYTLNILINS 111
Query: 159 HCYIEEETY-LSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD 217
C++ + S+L + K D A G+ E + + A L D ++G +
Sbjct: 112 FCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGD-ALHLFDKMIGEGFQP 170
Query: 218 KI---GKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
+ G + + + N + +L+ + E + + + Y I+
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSM---------------EQGNCQPDVVVYTSIID 215
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + V + +N+ +M +G DI TY + + L M++ P
Sbjct: 216 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 275
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
V ++ + AL K G+ EA
Sbjct: 276 DV-------------------------------------VIFSTVVDALCKEGKITEAHD 298
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M G EP+ +TY+ ++ G C ++A V D M NG P++ ++ LI G+C
Sbjct: 299 VVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC 358
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+D+A F +M +K + + L++G R+ A L EM+ ++ P
Sbjct: 359 KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI-PDL 417
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKA 571
AT++ L++ L L+EAM LL+ ++ N P + + + + + G +E A +
Sbjct: 418 ATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSN 477
Query: 572 LSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
LS K P+ Y + G EA L
Sbjct: 478 LSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 509
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/422 (22%), Positives = 179/422 (42%), Gaps = 25/422 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + Y SI+ L K ++ ++
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE-- 225
Query: 185 ALNQFHDGMVKEIAMDNVAKT-LVDVVLG-SDW-------DDKIGKKLEDMKIELSDNFV 235
A N F + + I+ D T L+ + +W + I K+ + + V
Sbjct: 226 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP-DVVIFSTVV 284
Query: 236 LTVLKELRI---YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ KE +I + V + R G + N +TYN ++ + + V + M
Sbjct: 285 DALCKEGKITEAHDVVDMMIIR------GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 338
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
GY ++ +Y + + K + M+ A LFE M P+ + L+ + +
Sbjct: 339 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGR- 397
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
L + ++ + G + Y + L K DEA ++K ++ + +PD Y+
Sbjct: 398 -LQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 456
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
VI G+C+AG E A ++ + G P+++T+TI+I G C +D A F +M
Sbjct: 457 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 516
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D + + G L K A +LL EM+ R + TL+ ++L +L++
Sbjct: 517 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEML--ARGFSADVSTTTLLVEMLCDDKLDQ 574
Query: 533 AM 534
++
Sbjct: 575 SV 576
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
++ K ++ + M + G PD T + +I C R A +VL ++ + G P
Sbjct: 76 SIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQP 135
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+T LI+G C ++ AL F KM+ + + + LING N A +LL
Sbjct: 136 DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL 195
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
M E+ +P + ++I+ L R++ EA NL M Q P + I
Sbjct: 196 RSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 254
Query: 562 V---EDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + L + ++ K P + V ++ EG+ EA D++
Sbjct: 255 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 300
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 1/182 (0%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
SL S ++ H D+A M + P + +++++ + K ++
Sbjct: 25 SLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYP 84
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ ++M+ G PD+ T ILI C N A AK+++ D LI
Sbjct: 85 TVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLI 144
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G + ++ A L +MI + +P T+ TLI L A+ LLR M++ N
Sbjct: 145 RGLCVEGKIGDALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC 203
Query: 546 PP 547
P
Sbjct: 204 QP 205
>gi|255660904|gb|ACU25621.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 484
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 172/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + +A+ + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKAILRRGRYMMAKRYFNKMLSEGIEPARHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAGKMIEARSILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 188/449 (41%), Gaps = 45/449 (10%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
E+S N V VLK + A FF W G++H+ +Y+ ++ +L W+
Sbjct: 75 EISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPGFEHSEESYHILVNILGTSRQFAILWDF 134
Query: 289 VEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ EM++ +E++ + + R + + + DA++ F+ M + +PSV D LL +
Sbjct: 135 LIEMRESHDFEINQEIIWLVFRSYSRANLPSDAIRAFDRMAEFGLRPSVDDLDKLLYVLC 194
Query: 348 SINNPDLGLVF--RVANKYES------------------------------LGNSLSKSV 375
+ F RV +K+E+ G +L
Sbjct: 195 KCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLA 254
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + AL K G DEA KM + + + G EPD +Y+ I C+A +VLD M+
Sbjct: 255 YNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMK 314
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+P++ T+ +I+ C +V+ A +MME+ DA + ++ VN
Sbjct: 315 RYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVN 374
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A KL+ M++ L P + ++ L++ L+ R + A + M ++ + P +
Sbjct: 375 RATKLISIMVKDNCL-PDRHSYNMLLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVM 433
Query: 556 I----SKFGTVEDASEFLKALSVKEYPSSAAYLQVFES---FFNEGRHYEAKDLLYKCPH 608
I K G +E+A + + + + P A+ +++ + F H E + C
Sbjct: 434 IHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNRLIGFGLLDHIE----ILACKM 489
Query: 609 HIRQDSKISLLFGSAKSNKVTIPSRKEST 637
I L + NK + SR E T
Sbjct: 490 ERGTSCSIQELAKEMRGNKACVRSRNEET 518
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN I+ + R +++ +M++ + D+ TY I + ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K SV + L+R + D L+ + E + N ++ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT---FN 302
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F + ++ A+A +L+ GF ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ L P T+ L++ L +LE+A+ + ++K ++
Sbjct: 423 EELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 156/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + + +
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+AV L + M++ +P V + ++ I + D L + K E Y
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGIC--RSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+P++ T+ +L+ ++ A + +M+ + + + L++G+ Q R++ A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ + P TF +LI+ +R+++ M + R + K+ + VQ
Sbjct: 353 NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G ++ A E F + +S P Y + + + G+ +A ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ PS+ D S +I+ LV + E N ++ ++Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIA--RTKQFNLVLDFCKQLEL--NGIAHNIYT 125
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GL G+ +A ++D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC PD+ T+ ++ G C + + AL KM E+N AD +I+ ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + LL+ M + P F
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +++A+E K + + P+ Y + + + + R EA ++L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 92/456 (20%), Positives = 183/456 (40%), Gaps = 61/456 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ +++ L + + + V + RM E+ C + TY SI+ G+ + +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L L + + VK T++D + D ++M+ + + V+T
Sbjct: 211 LALDLLRKMEERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT--- 265
Query: 241 ELRIYPVKALGFFRWVGEHSG-----------YKHNTITYNGILRVLARHESVRDFWNVV 289
Y G + + G N IT+N +L V + +++ +
Sbjct: 266 ----YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G +I TY + + + +A + + M+ P + + L++ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D G+ VFR +K + N+++ S+ + + + G+ AE++ + M + G PD
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSI---LVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 409 ITY-----------------------------------SQVIFGLCKAGRFEDACNVLDE 433
+TY + +I G+CK G+ EDA N+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G P++ T+T++I G C + A + KM E + + LI L
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + KL+ EM + ++ K +I+ LL A +
Sbjct: 559 LTASAKLIEEM-KSCGFSADASSIKMVIDMLLSAMK 593
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+ +++ + V D V + K G + TY + + F + ++ A +LF
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSKSVYDGIHR 381
+ M+ P V +LL + D G + + +E L S L +Y I
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++A + ++ G +P+ +TY+ +I GLCK G +A +L +MEE+G P
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 541
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS-QKRVNGAYKL 500
+ T+ LI+ H ++ + +M + ADA + ++I+ LS KR+ Y L
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 601
>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g21222-like [Cucumis sativus]
Length = 609
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 102/442 (23%), Positives = 200/442 (45%), Gaps = 41/442 (9%)
Query: 109 PEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYL 168
P++A FN + ++ RP++ Y+ ++ L + K L M EET +
Sbjct: 73 PQEAQFIFNSLVEQGH-RPTTVTYTALVAALTRQKRFKAISGLLSEM--------EETGI 123
Query: 169 SILGVLKKAKKASDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK 227
+L A +N F + G VKE AM+ I +K+E+
Sbjct: 124 KPDSILLNA-------IINAFSESGNVKE-AME------------------IFQKMEESG 157
Query: 228 IELSDNFVLTVLKELRIY--PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+ + + T++K I P +++ + + K N TYN ++ L + +S+++
Sbjct: 158 CKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEA 217
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
WNVV +M G + D+ TY ++R + + A + M++ P+ + C +++
Sbjct: 218 WNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVNPNERTCGIIVGG 277
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N L RV + LG + +++ + + +G D +K + M+ +G +
Sbjct: 278 YCEQGN--LAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKALTMMEESGVK 335
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD IT+S ++ G AGR + + D+M ++G PDI ++IL +G A E +A
Sbjct: 336 PDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVRAGEPVKAESL 395
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
M + + + +I+G+ + ++ A+K+ M + + + P TF+TLI
Sbjct: 396 LNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCD-MDVSPNLKTFETLIWGYG 454
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
A++ A +L++M++ N P
Sbjct: 455 EAKQPWRAEEILQMMEEMNVVP 476
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 378 GIHRALTKL-------GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
G R+ TKL G+ EA+ + ++ G P +TY+ ++ L + RF+ +
Sbjct: 55 GTVRSRTKLMNILVERGKPQEAQFIFNSLVEQGHRPTTVTYTALVAALTRQKRFKAISGL 114
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L EMEE G PD +I + V A+ F KM E + LI G+
Sbjct: 115 LSEMEETGIKPDSILLNAIINAFSESGNVKEAMEIFQKMEESGCKPTTSTFNTLIKGYGI 174
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ + KLL M L+P T+ L+ L + ++EA N++ M P
Sbjct: 175 IRKPEESMKLLELMTRTTNLKPNNRTYNILVGALCKKKSIKEAWNVVHQMLASGVQP 231
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 139/283 (49%), Gaps = 8/283 (2%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+TYN ++ L + E + ++++EEM G DI TY + F K + +DA+++FE
Sbjct: 116 VTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQ 175
Query: 327 MMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++ ++P V S L+ + + L R+ + N+++ Y+ +
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT---YNSLISGFC 232
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
++G+ DEA +++ M G PD +TY+ ++ G CK R +DA ++L++M G PD+
Sbjct: 233 RMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVV 292
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T L+ G C N + A+ +M K+ + +++G+ ++ A K M
Sbjct: 293 TFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKF---M 349
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+E++ P +F +I L R EAM L+ +++ P
Sbjct: 350 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 392
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 146/312 (46%), Gaps = 15/312 (4%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D TY + + K + +E A+ M+ + P V + ++ ++ N
Sbjct: 10 DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR------LH 63
Query: 360 VANKY-ESLGN-SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
A K+ E + N +L+ +V Y + L K GR DEA ++ M+ P +TY+ +I
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLI 122
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKA R +A ++L+EM +GCIPDI T+T LI G C + + D AL F +++ + +
Sbjct: 123 SGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFR 182
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D LI+G + R+ A L MI+ P T+ +LI +++EAMN
Sbjct: 183 PDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMN 242
Query: 536 LLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
LL M + P + ++ F ++DA + L ++ K P + + +
Sbjct: 243 LLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLC 302
Query: 592 NEGRHYEAKDLL 603
E R +A +L
Sbjct: 303 RENRLSDAVHIL 314
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 109/468 (23%), Positives = 200/468 (42%), Gaps = 39/468 (8%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ +V++ L ++N +A F + ++ P+ Y++++ L + + L
Sbjct: 48 TYTAVIHAL-CVENRLHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLS 105
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVL 211
+M++ C TY S++ L KA++AS+ L + G + +I TL+
Sbjct: 106 KMRK-KCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIF---TYTTLITGFC 161
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLT-------VLKELRIYPVKALGFFRWVGEHSGYKH 264
S D + E + V+T + KE R+ +A+ F + +
Sbjct: 162 KSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLK--EAIDLFGRMIKSGSCMP 219
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ R + + N++E M + G D+ TY + F K ++DA L
Sbjct: 220 NTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLL 279
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
M P V + L+ + N R+++ LG KS Y+
Sbjct: 280 NQMTRKGLTPDVVTFTSLMDGLCREN--------RLSDAVHILGEMRRKSCSPTVYTYNT 331
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I + + +EA K M ++ P+ ++++ +I GLCK R +A +++E
Sbjct: 332 ILDGYCRANQLEEARKFM--LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRR 389
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGA 497
C PD+ +T +I G C +VD A + KM+E+ ++ LI G + ++ A
Sbjct: 390 CNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA 449
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
IEK + P T+ LI+ A R E+A LL M ++ +
Sbjct: 450 RGY----IEKGCV-PNIGTYNLLIDAFRKANRDEDARELLDDMVQRGF 492
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N C D T+T LIQG C +++AL+ KM+ K + D +I+ + R++
Sbjct: 5 NSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHE 64
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A K L EM + L P T+ LI+ L R++EA+ LL M+K+ P + I
Sbjct: 65 ARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNSLI 122
Query: 557 SKFGTVEDASE 567
S E ASE
Sbjct: 123 SGLCKAERASE 133
>gi|255660888|gb|ACU25613.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 481
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNXLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 219/490 (44%), Gaps = 23/490 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P+ Y+L + L + ++ + RMK+ C +TY +++ L + K
Sbjct: 338 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 397
Query: 182 DLAALNQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDD--KIGKKLEDMKIELSDNFVL 236
A+ +H M+KE + N + ++ +G + KI +E +
Sbjct: 398 --VAIGLYHK-MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 454
Query: 237 TVLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
++K L + KA+ F + + G +TYN ++ +V + +++ MK+
Sbjct: 455 EIIKGLCLGGDIEKAMVLFEKMLK-MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 513
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G E D TY ++ F K+ +E A F+ M++ P+ + L+ S D+
Sbjct: 514 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDI 573
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L + + E +G + + Y+ + L+K RF EAEK+ M G P+ ITY+ +
Sbjct: 574 AL--SLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTL 631
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I GLC+ GR + A + +ME+ C+P++ T++ LI G C + D A + +M K
Sbjct: 632 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 691
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D LI+GF+ R++ A+ LL M++ V +P T+ L++ L L E
Sbjct: 692 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD-VGCKPNYRTYSVLLKGLQKECLLLEEK 750
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNE 593
++ ++ P E V + E S L +S + P+ Y + +
Sbjct: 751 VAVQHEAVYSFSPH-EKDVNF-------EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRK 802
Query: 594 GRHYEAKDLL 603
GR YEA+ L+
Sbjct: 803 GRFYEAEQLV 812
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 118/533 (22%), Positives = 232/533 (43%), Gaps = 34/533 (6%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
++L++LSP+L V ++ + D E FF W+ + ++ + + ML LV +D
Sbjct: 106 SELKQLSPQLKAHHVAEIV-AVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLV-RD 163
Query: 144 SLKQFWVTLRRMKEDHCYIEEET--YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ +R + C EEE L + L + N + K M
Sbjct: 164 RVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAK-FEMVE 222
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE---LRIYPVKALGFFRWVGE 258
A+ L +L S + L+ N ++ +L + +R + F++
Sbjct: 223 GARNLYKQMLNSGIQPSL----------LTFNTLINILSKKGKVREAELILSQIFQY--- 269
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ TY ++ R+ ++ + V + M KEG + + TY + ++
Sbjct: 270 --DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 327
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVY 376
+A+ + E M++ +P+V +L + ++ +I + + LV R+ + G + Y
Sbjct: 328 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR----GCRPNVQTY 383
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L++LG+ + A + M G P+ +TY+ +I LC GRF A + ME
Sbjct: 384 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 443
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+G + + +T+ +I+G C ++++A++ F KM++ + LING+L++ VN
Sbjct: 444 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 503
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +LL +++++ P + T+ L+ +LE A + M + P P + I
Sbjct: 504 AARLL-DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLI 562
Query: 557 ---SKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
SK G V+ A L+ + + P+ +Y V E R EA+ + K
Sbjct: 563 DGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 615
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 123/282 (43%), Gaps = 23/282 (8%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TY+ ++ L + + +++EM+++G D T+ + F ++ A L
Sbjct: 659 NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLL 718
Query: 325 EFMMDGPYKPSVQDCSLLLRSIS--------------------SINNPDLG--LVFRVAN 362
M+D KP+ + S+LL+ + S + D+ +V +
Sbjct: 719 RRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLA 778
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ +G + Y + L + GRF EAE+++K MK GF PD Y ++ CK
Sbjct: 779 RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNL 838
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ A + +E G + + LI C A +V+ A F M+EK ++AD +
Sbjct: 839 EVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWT 898
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
VL++G L + ++ KLL ++E P T+ L +L
Sbjct: 899 VLVDGLLKEGELDLCMKLL-HIMESKNFTPNIQTYVILGREL 939
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 186/511 (36%), Gaps = 101/511 (19%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
L D EKA F + P+ Y+ ++ + K ++ L MKE+ C +E
Sbjct: 462 LGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 520
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE 224
TY ++ K K L + + + MV E ++ + ++ G D K+
Sbjct: 521 WTYNELVSGFSKWGK---LESASFYFQEMV-ECGLNPNPVSYTTLIDGHSKDGKV----- 571
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ L++L+ + E G N +YN ++ L++ +
Sbjct: 572 --------DIALSLLERM---------------EEMGCNPNVESYNAVINGLSKENRFSE 608
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ ++M ++G ++ TY + + + A K+F M P++ S L+
Sbjct: 609 AEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 668
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ D + + + E G + + + + LGR D A +++ M + G
Sbjct: 669 GLCQEGKADEAEI--LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726
Query: 405 EPDNITYSQVIFGL---C---------------------KAGRFEDACNVLDEMEENGCI 440
+P+ TYS ++ GL C K FE N+L M E GC
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786
Query: 441 PDIKTWTILIQGHCAAN-----------------------------------EVDRALLC 465
P + T++ L+ G C EVD AL
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA---TFKTLIE 522
F + K + + LI +V A L M+EK W A + L++
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEK----EWNADEIVWTVLVD 902
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
LL L+ M LL +M+ +N+ P + +V
Sbjct: 903 GLLKEGELDLCMKLLHIMESKNFTPNIQTYV 933
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/383 (24%), Positives = 163/383 (42%), Gaps = 40/383 (10%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + + + V V+K VK + FFRW + Y+H+T TY ++R
Sbjct: 73 WGPDAEKALEVLMLRVDHWLVREVMKTDIGVNVK-MQFFRWAAKRRNYEHDTSTYMALIR 131
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYI-KISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L E + W +++EM + + T + ++ R +M+ A+ +F + +
Sbjct: 132 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQ 191
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDEA 392
P+ Q + ++ I ++ G V + N+ + G+ ++ Y + A KLGR D A
Sbjct: 192 PTAQAYNSMI--IMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSA 249
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ MK G +P Y+ +I K A ++ +EM C PD+ T+T LI+G
Sbjct: 250 TQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYTELIRG 309
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-------- 504
A +D A F +M + D +++ +IN R++ A KL EM
Sbjct: 310 LGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPS 369
Query: 505 ---------------------------IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+++ + P T+ LI+ R+E+AM LL
Sbjct: 370 VVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLL 429
Query: 538 RLMKKQNYPPFPEPFVQYISKFG 560
M ++ +PP P + I G
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDALG 452
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 169/413 (40%), Gaps = 37/413 (8%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ +++ KL + A+ N + + +P++ +Y++++ D +
Sbjct: 231 MTYSALISAFCKLGRR-DSATQLLNEM-KENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M+ +C + TY ++ L KA + + A + F++ + D V + LG
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDE--AYHFFYEMQREGCRPDTVVMNNMINFLG 346
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
K G+ + MK+ + LR P + +TYN I
Sbjct: 347 -----KAGRLDDAMKL-------FQEMGTLRCIP------------------SVVTYNTI 376
Query: 273 LRVLARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ L +S + + E MK+ G TY + F K ME A+ L E M +
Sbjct: 377 IKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKG 436
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
+ P L+ ++ DL K E+ G+S S VY + + L K GR D+
Sbjct: 437 FPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENCGSS-SARVYAVMIKHLGKAGRLDD 494
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A M M G PD Y+ ++ GL + G ++A + + M+E+GCIPDI ++ I++
Sbjct: 495 AINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILN 554
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
G RA+ + M + D + ++ A KL+ EM
Sbjct: 555 GLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEM 607
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 108/498 (21%), Positives = 201/498 (40%), Gaps = 82/498 (16%)
Query: 101 VLRKLDNDP--EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK-E 157
V+R L N KA A F + +K +P++ Y+ M+ L+++ + M E
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRK-CQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTE 223
Query: 158 DHCYIEEETYLSILGVLKK-AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD 216
HC+ + TY +++ K ++ S LN+ +KE M K ++
Sbjct: 224 GHCFPDTMTYSALISAFCKLGRRDSATQLLNE-----MKENGMQPTTKIYTMLI------ 272
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ KL+D+ + L++ +E+R H + + TY ++R L
Sbjct: 273 -TLFFKLDDV------HGALSLFEEMR---------------HQYCRPDVFTYTELIRGL 310
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ + + ++ EM++EG D + K ++DA+KLF+ M PSV
Sbjct: 311 GKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPSV 370
Query: 337 QDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+ +++++ S ++ F + + G S S Y + K R ++A
Sbjct: 371 VTYNTIIKALFESKSRASEVPSWF---ERMKESGISPSSFTYSILIDGFCKTNRMEKAMM 427
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN----------------- 437
+++ M GF P Y +I L KA R++ AC + E++EN
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 438 ------------------GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
GC PD+ + L+ G +D AL +M E D +
Sbjct: 488 KAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDIN 547
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++++NG + A ++L M ++ +RP ++ T++ L A EEA +L
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEEA---AKL 603
Query: 540 MKKQNYPPFPEPFVQYIS 557
M++ N F + Y S
Sbjct: 604 MEEMNTLGFEYDLITYSS 621
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A F+ + E+ G + Y +++ L + + D N+ +EM K G D+ Y +
Sbjct: 460 ACELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 518
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ M+++A+ M + P + +++L ++ P + E L
Sbjct: 519 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM--------EMLS 570
Query: 369 NSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
N +V Y+ + AL+ G F+EA K+M+ M GFE D ITYS ++ + K
Sbjct: 571 NMKQSTVRPDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 84/401 (20%), Positives = 164/401 (40%), Gaps = 34/401 (8%)
Query: 77 DWSDELENKLEELSPKLT---HESVVYVLRKLDNDPEKASAFFNWVCDKKQF-RPSSTVY 132
D + +L N+++E + T + ++ + KLD D A + F + + Q+ RP Y
Sbjct: 247 DSATQLLNEMKENGMQPTTKIYTMLITLFFKLD-DVHGALSLFEEM--RHQYCRPDVFTY 303
Query: 133 SLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD- 191
+ ++R L + + + M+ + C + +++ L KA + D A+ F +
Sbjct: 304 TELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDD--AMKLFQEM 361
Query: 192 GMVKEIAMDNVAKTLVDVVLGS-DWDDKIGKKLEDMKIE-----------LSDNFVLTVL 239
G ++ I T++ + S ++ E MK L D F T
Sbjct: 362 GTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNR 421
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
E KA+ + E G+ Y ++ L + + + +E+K+
Sbjct: 422 ME------KAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSS 474
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
Y + + K ++DA+ +F+ M P V + L+ ++ D L
Sbjct: 475 SARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL--S 532
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ + G + Y+ I L K G A +M+ MK + PD ++Y+ V+ L
Sbjct: 533 TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALS 592
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
AG FE+A +++EM G D+ T++ +++ A +VD
Sbjct: 593 HAGMFEEAAKLMEEMNTLGFEYDLITYSSILE---AIGKVD 630
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 161/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN I+ + R ++++ +M++ + D+ TY I + ++
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K SV + L+R + D L+ + E + N ++ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT---FN 302
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F + ++ A+A +L+ GF ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ L P T+ L++ L +LE+A+ + ++K ++
Sbjct: 423 EELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + +
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKV 174
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
AV L + M++ +P + + ++ I + D L F + K E Y
Sbjct: 175 SKAVVLVDRMVENGCQPDMVTYNSIVNGIC--RSGDTSLAFDMLRKMEERNVKADVFTYS 232
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+P++ T+ +L+ ++ A + +M+ + + + L++G+ Q R++ A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ + P TF +LI+ +R+++ M + R + K+ + VQ
Sbjct: 353 NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G ++ A E F + +S P Y + + + G+ +A ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 130/292 (44%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ P + D S +I+ LV + E N ++ ++Y
Sbjct: 70 DDAIALFQEMIRSRPLPGLVDFSRFFSAIA--RTKQFNLVLDFCKQLEL--NGIAHNIYT 125
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GLC G+ A ++D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMV 185
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC PD+ T+ ++ G C + + A KM E+N AD +I+ ++
Sbjct: 186 ENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + LL+ M + P F
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +++A+E K + + P+ Y + + + + R EA ++L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 179/454 (39%), Gaps = 61/454 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ ++ L + + + V + RM E+ C + TY SI+ G+ + +
Sbjct: 151 KLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTS 210
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L + + VK T++D + D ++M+ + + V+T
Sbjct: 211 LAFDMLRKMEERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT--- 265
Query: 241 ELRIYPVKALGFFRWVGEHSG-----------YKHNTITYNGILRVLARHESVRDFWNVV 289
Y G + + G N IT+N +L V + +++ +
Sbjct: 266 ----YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G +I TY + + + +A + + M+ P + + L++ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D G+ VFR +K + N+++ S+ + + + G+ AE++ + M + G PD
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSI---LVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 409 ITY-----------------------------------SQVIFGLCKAGRFEDACNVLDE 433
+TY + +I G+CK G+ EDA N+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G P++ T+T++I G C + A + KM E + + LI L
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+ + KL+ EM + ++ K +I+ LL
Sbjct: 559 LTASAKLIEEM-KSCGFSADASSIKMVIDMLLSG 591
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 136/276 (49%), Gaps = 9/276 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKI 307
A F+ W + SG++ + Y +++VL+R W ++EEM++E + + ++ +
Sbjct: 113 AYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVIL 172
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R+F RM+ AV++ + M + +P LL ++ G V A+ +E L
Sbjct: 173 MRRFASARMVHKAVQVLDEMPNYGCEPDEYVFGCLLDALRKN-----GSVKEAASLFEEL 227
Query: 368 GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
SV + + K G+ EA+ ++ MK+AG EPD + Y+ ++ G +A +
Sbjct: 228 RYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMG 287
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA ++L EM GC P+ ++T+LIQ C ++ A F +M AD LI
Sbjct: 288 DAYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLI 347
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
+GF ++ Y+LL EMI++ P Q ++ ++
Sbjct: 348 SGFCKWGKIKRGYELLDEMIQQGHF-PNQVIYQHIM 382
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 114/288 (39%), Gaps = 46/288 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +Y +++ L +HE + + V EM++ G + D+ TY + F K+ ++
Sbjct: 300 GCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRG 359
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L + M+ + P+ ++ ++ +L + N+ + +G + S+Y+ +
Sbjct: 360 YELLDEMIQQGHFPNQVIYQHIM--VAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVI 417
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM------ 434
R KLG E ++ M+++G P T+ +I G + G +AC EM
Sbjct: 418 RLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLF 477
Query: 435 --------------------------------EENGCIPDIKTWTILIQGHCAANEVDRA 462
GC ++ WTI I + V A
Sbjct: 478 AAPQYGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEA 537
Query: 463 L-LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
C A MM+K+ D L+ G +K N + E+ EKVR
Sbjct: 538 CSFCIA-MMDKDLMPQPDTFAKLMRGL--KKLYNREFA--AEITEKVR 580
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 191/430 (44%), Gaps = 25/430 (5%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ L ++ LS VL L+ +R P KAL FFRWV E G+ HN +Y ++
Sbjct: 78 WSHELQSSLAELAPSLSKTTVLQTLQLIRT-PAKALHFFRWV-EAKGFTHNEQSYFLMIE 135
Query: 275 VLARHE---SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+L R + R+F +E+ ++ + + R + + ++++K+F+ M +
Sbjct: 136 ILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIG 195
Query: 332 YKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
PSV + LL + + L + + Y G + ++ + R
Sbjct: 196 VSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY---GVTPDTYTFNILIRGFCMNSMV 252
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWT 447
DE K M +PD +TY+ ++ GLC+AG+ + A NV+ M + P++ T+T
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI+G+C ++ AL A+M+ + + + LI G ++++ ++L M+
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVED 564
P T TLI+ +LEEA ++ M + P + V+ + + G
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 565 ASEFLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--S 614
A EF L+ KE P AAY +FE + G+ +A+ + + QD S
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS 492
Query: 615 KISLLFGSAK 624
+L+ G +
Sbjct: 493 YKTLILGHCR 502
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/607 (23%), Positives = 255/607 (42%), Gaps = 106/607 (17%)
Query: 9 SSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNS 68
SSL+ +S LS SST PL + + H ISS ++ + N K T +
Sbjct: 11 SSLKRCSSHLSSNLSSTPPLNSLLIHTQFISSISSQQPIKITP---NEGLKAATKTKRSQ 67
Query: 69 SL-ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
++ LI WS EL++ L EL+P L+ +V+ L +L P KA FF WV + K F
Sbjct: 68 AMARLINTEPWSHELQSSLAELAPSLSKTTVLQTL-QLIRTPAKALHFFRWV-EAKGFTH 125
Query: 128 SSTVYSLMLRNLV---NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+ Y LM+ L N ++ + F ++ + + + + S++ ++ A
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLI-------RSYGWA 178
Query: 185 ALNQFHDGM-----VKEIAMDNVAKT---LVDVVLGSDWDDKIGKKLEDMKIEL----SD 232
L F + + +KEI + T L+ +VL + K+L D ++ D
Sbjct: 179 GL--FQESIKVFKTMKEIGVSPSVVTFNSLLSIVL-KRGRTSMAKQLFDEMLDTYGVTPD 235
Query: 233 NFVLTVLKELRIYPVKAL---GFFRWVGEHSGYK--HNTITYNGILRVLARHESVRDFWN 287
+ +L +R + + ++ GF+ + E S +K + +TYN ++ L R V+ N
Sbjct: 236 TYTFNIL--IRGFCMNSMVDEGFW-FFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHN 292
Query: 288 VVEEMKKEGYEM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
VV+ M K+ + ++ TY + R + + M +A+ L M+ KP+ + L++
Sbjct: 293 VVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQG 352
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDG-----------IHRALTKLGRFDEAEK 394
+ A K + + L V DG + +A +G+ +EA
Sbjct: 353 LCE------------AQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN-------GCIP------ 441
+ + M +PD+ TYS ++ LC+ G F A DE+ E GC P
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460
Query: 442 ----------------------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
D ++ LI GHC + M+ ++
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRD 520
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ DA+ ++I+G L + A+K L +M++ L P A F +++ L+ E+
Sbjct: 521 FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL-PTTAIFHSILAALVEKGCAHES 579
Query: 534 MNLLRLM 540
+L++LM
Sbjct: 580 ASLVKLM 586
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 132/302 (43%), Gaps = 26/302 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQFQKFRMMED 319
G K N ITYN +++ L + + ++E M +G + D T + + +E+
Sbjct: 338 GLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEE 397
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-----------ESLG 368
A +FE M + +P S+L+RS+ + FR A ++ +G
Sbjct: 398 AFSVFEKMSELRVQPDSATYSVLVRSLCQRGD------FRRAEEFFDELAEKEILLHDVG 451
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + L G+ +AE++ + + G + D +Y +I G C+ G E
Sbjct: 452 CKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGHCREGTPEAGF 510
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++L M +PD +T+ ++I G + A KM++ ++ + ++
Sbjct: 511 DLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAAL 570
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRP----WQATFKTLIEKLLGARRLEEA--MNLLRLMKK 542
+ + + + L+ M+E+ R+R T + L+ L +R+L EA M L L K+
Sbjct: 571 VEKGCAHESASLVKLMLER-RIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKR 629
Query: 543 QN 544
Q+
Sbjct: 630 QS 631
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN I+ + R +++ +M++ + D+ TY I + ++
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K SV + L+R + D L+ + E + N ++ ++
Sbjct: 236 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT---FN 292
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 293 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 352
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F + ++ A+A +L+ GF ++ A
Sbjct: 353 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 412
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ L P T+ L++ L +LE+A+ + ++K ++
Sbjct: 413 EELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 523
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 156/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + + +
Sbjct: 105 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 164
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+AV L + M++ +P V + ++ I + D L + K E Y
Sbjct: 165 SEAVVLVDRMVENGCQPDVVTYNSIVNGIC--RSGDTSLALDLLRKMEERNVKADVFTYS 222
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 223 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 282
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+P++ T+ +L+ ++ A + +M+ + + + L++G+ Q R++ A
Sbjct: 283 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 342
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ + P TF +LI+ +R+++ M + R + K+ + VQ
Sbjct: 343 NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 401
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G ++ A E F + +S P Y + + + G+ +A ++
Sbjct: 402 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 450
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ PS+ D S +I+ LV + E N ++ ++Y
Sbjct: 60 DDAIALFQEMIRSRPLPSLVDFSRFFSAIA--RTKQFNLVLDFCKQLEL--NGIAHNIYT 115
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GL G+ +A ++D M
Sbjct: 116 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 175
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC PD+ T+ ++ G C + + AL KM E+N AD +I+ ++
Sbjct: 176 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 235
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + LL+ M + P F
Sbjct: 236 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +++A+E K + + P+ Y + + + + R EA ++L
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 346
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/449 (20%), Positives = 186/449 (41%), Gaps = 51/449 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ +++ L + + + V + RM E+ C + TY SI+ G+ + +
Sbjct: 141 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 200
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD---KIGKKLEDMKIE---LSDNF 234
L L + + VK T++D + D + K++E I+ ++ N
Sbjct: 201 LALDLLRKMEERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 258
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
++ L + + AL V N IT+N +L V + +++ + +EM
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMIT 316
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G +I TY + + + +A + + M+ P + + L++ + D
Sbjct: 317 RGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDD 376
Query: 355 GL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY-- 411
G+ VFR +K + N+++ S+ + + + G+ AE++ + M + G PD +TY
Sbjct: 377 GMKVFRNISKRGLVANAVTYSI---LVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 433
Query: 412 ---------------------------------SQVIFGLCKAGRFEDACNVLDEMEENG 438
+ +I G+CK G+ EDA N+ + G
Sbjct: 434 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 493
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P++ T+T++I G C + A + KM E + + LI L + +
Sbjct: 494 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 553
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
KL+ EM + ++ K +I+ LL A
Sbjct: 554 KLIEEM-KSCGFSADASSIKMVIDMLLSA 581
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 112/240 (46%), Gaps = 9/240 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+ +++ + V D V + K G + TY + + F + ++ A +LF
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSKSVYDGIHR 381
+ M+ P V +LL + D G + + +E L S L +Y I
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLC-----DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 471
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++A + ++ G +P+ +TY+ +I GLCK G +A +L +MEE+G P
Sbjct: 472 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAP 531
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS-QKRVNGAYKL 500
+ T+ LI+ H ++ + +M + ADA + ++I+ LS KR+ Y L
Sbjct: 532 NDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCL 591
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%)
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
AE++ K M G P+ ITYS +I G CK R ++A +LD M G
Sbjct: 718 AEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 191/430 (44%), Gaps = 25/430 (5%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ L ++ LS VL L+ +R P KAL FFRWV E G+ HN +Y ++
Sbjct: 78 WSHELQSSLAELAPSLSKTTVLQTLQLIRT-PAKALHFFRWV-EAKGFTHNEQSYFLMIE 135
Query: 275 VLARHE---SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+L R + R+F +E+ ++ + + R + + ++++K+F+ M +
Sbjct: 136 ILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIG 195
Query: 332 YKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
PSV + LL + + L + + Y G + ++ + R
Sbjct: 196 VSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY---GVTPDTYTFNILIRGFCMNSMV 252
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWT 447
DE K M +PD +TY+ ++ GLC+AG+ + A NV+ M + P++ T+T
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI+G+C ++ AL A+M+ + + + LI G ++++ ++L M+
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVED 564
P T TLI+ +LEEA ++ M + P + V+ + + G
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 565 ASEFLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--S 614
A EF L+ KE P AAY +FE + G+ +A+ + + QD S
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPS 492
Query: 615 KISLLFGSAK 624
+L+ G +
Sbjct: 493 YKTLILGHCR 502
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 142/607 (23%), Positives = 255/607 (42%), Gaps = 106/607 (17%)
Query: 9 SSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNS 68
SSL+ +S LS SST PL + + H ISS ++ + N K T +
Sbjct: 11 SSLKRCSSHLSSNLSSTPPLNSLLIHTQFISSISSQQPIKITP---NEGLKAATKTKRSQ 67
Query: 69 SL-ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
++ LI WS EL++ L EL+P L+ +V+ L +L P KA FF WV + K F
Sbjct: 68 AMARLINTEPWSHELQSSLAELAPSLSKTTVLQTL-QLIRTPAKALHFFRWV-EAKGFTH 125
Query: 128 SSTVYSLMLRNLV---NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+ Y LM+ L N ++ + F ++ + + + + S++ ++ A
Sbjct: 126 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAVKLGDRFFNSLI-------RSYGWA 178
Query: 185 ALNQFHDGM-----VKEIAMDNVAKT---LVDVVLGSDWDDKIGKKLEDMKIEL----SD 232
L F + + +KEI + T L+ +VL + K+L D ++ D
Sbjct: 179 GL--FQESIKVFKTMKEIGVSPSVVTFNSLLSIVL-KRGRTSMAKQLFDEMLDTYGVTPD 235
Query: 233 NFVLTVLKELRIYPVKAL---GFFRWVGEHSGYK--HNTITYNGILRVLARHESVRDFWN 287
+ +L +R + + ++ GF+ + E S +K + +TYN ++ L R V+ N
Sbjct: 236 TYTFNIL--IRGFCMNSMVDEGFW-FFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHN 292
Query: 288 VVEEMKKEGYEM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
VV+ M K+ + ++ TY + R + + M +A+ L M+ KP+ + L++
Sbjct: 293 VVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQG 352
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDG-----------IHRALTKLGRFDEAEK 394
+ A K + + L V DG + +A +G+ +EA
Sbjct: 353 LCE------------AQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFS 400
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN-------GCIP------ 441
+ + M +PD+ TYS ++ LC+ G F A DE+ E GC P
Sbjct: 401 VFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYN 460
Query: 442 ----------------------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
D ++ LI GHC + M+ ++
Sbjct: 461 PMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRD 520
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ DA+ ++I+G L + A+K L +M++ L P A F +++ L+ E+
Sbjct: 521 FVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHL-PTTAIFHSILAALVEKGCAHES 579
Query: 534 MNLLRLM 540
+L++LM
Sbjct: 580 ASLVKLM 586
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN I+ + R +++ +M++ + D+ TY I + ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K SV + L+R + D L+ + E + N ++ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT---FN 302
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F + ++ A+A +L+ GF ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ L P T+ L++ L +LE+A+ + ++K ++
Sbjct: 423 EELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 156/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + + +
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+AV L + M++ +P V + ++ I + D L + K E Y
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGIC--RSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+P++ T+ +L+ ++ A + +M+ + + + L++G+ Q R++ A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ + P TF +LI+ +R+++ M + R + K+ + VQ
Sbjct: 353 NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G ++ A E F + +S P Y + + + G+ +A ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ PS+ D S +I+ LV + E N ++ ++Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIA--RTKQFNLVLDFCKQLEL--NGIAHNIYT 125
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GL G+ +A ++D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC PD+ T+ ++ G C + + AL KM E+N AD +I+ ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + LL+ M + P F
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +++A+E K + + P+ Y + + + + R EA ++L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 181/454 (39%), Gaps = 61/454 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ +++ L + + + V + RM E+ C + TY SI+ G+ + +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L L + + VK T++D + D ++M+ + + V+T
Sbjct: 211 LALDLLRKMEERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT--- 265
Query: 241 ELRIYPVKALGFFRWVGEHSG-----------YKHNTITYNGILRVLARHESVRDFWNVV 289
Y G + + G N IT+N +L V + +++ +
Sbjct: 266 ----YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G +I TY + + + +A + + M+ P + + L++ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D G+ VFR +K + N+++ S+ + + + G+ AE++ + M + G PD
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSI---LVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 409 ITY-----------------------------------SQVIFGLCKAGRFEDACNVLDE 433
+TY + +I G+CK G+ EDA N+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G P++ T+T++I G C + A + KM E + + LI L
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+ + KL+ EM + ++ K +I+ LL
Sbjct: 559 LTASAKLIEEM-KSCGFSADASSIKMVIDMLLSG 591
>gi|15221411|ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535 DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
Length = 862
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 186/421 (44%), Gaps = 15/421 (3%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
I + L+ K +LS N V KE R ++L F+++ K N Y ++ +L
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + V +EM +G + +Y + + + E +++L + M + PS+
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 337 QDCSLLLRSISSINNPDLGLVFRVAN-KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ ++ + + GL+ A ++E + + Y+ + A G DEAE +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIV--TYNTLLSACAIRGLGDEAEMV 269
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M + G PD TYS ++ K R E C++L EM G +PDI ++ +L++ +
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ + A+ F +M +A+ VL+N F R + +L +EM + P A
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAA 388
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
T+ LIE +E + L M ++N P E + I K G EDA + L+ +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 573 SVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI----SLLFGSAKSNK 627
+ + PSS AY V E+ F + YE + + H + + I SLL+ A+
Sbjct: 449 TANDIVPSSKAYTGVIEA-FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Query: 628 V 628
V
Sbjct: 508 V 508
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 124/331 (37%), Gaps = 35/331 (10%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
LG F + H G + + +TYN +L A + V M G D+ TY +
Sbjct: 232 LGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRV------- 360
F K R +E L M G P + ++LL + + + +G+ ++
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 361 -ANKYESLGNSLSKSV-YDGIHRALTKL----------------------GRFDEAEKMM 396
AN Y L N +S YD + + ++ G F E +
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M EPD TY +IF K G EDA +L M N +P K +T +I+ A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ AL+ F M E + + L+ F V + +L +++ R + T
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN-RDT 529
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F IE + EEA+ M+K P
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
>gi|255660902|gb|ACU25620.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 484
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFXVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 148/346 (42%), Gaps = 42/346 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GYK N +Y+ I++ L R + ++E MK G E D+ Y I + K R++ +A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V +F M P+V Y SL IH
Sbjct: 251 VHIFCKMKGTGILPTVV-------------------------TYTSL-----------IH 274
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L LGR+ EA ++ MK PD + +S +I +CK G +A +L M E G
Sbjct: 275 -GLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVE 333
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ L+ G+C EV A F M+ K D +L+NG+ KR++ A +L
Sbjct: 334 PDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQL 393
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM + L P ++ TLI L ARR EA L + M YPP + + +S
Sbjct: 394 FDEMTHR-GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLS 452
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K G ++ A +A+ P Y + + G+ +A++L
Sbjct: 453 KQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDAREL 498
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 118/281 (41%), Gaps = 38/281 (13%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+ ++ ++ ++ + V + +++ M + G E D+ TY + + + +A K+FE
Sbjct: 302 VAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEV 361
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M+ P V S+L+ N Y K
Sbjct: 362 MISKGRMPDVFSFSILV------------------NGY-------------------CKA 384
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R DEA+++ M + G PD ++Y+ +I GLC+A R +A + +M NG P++ T+
Sbjct: 385 KRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTY 444
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+IL+ +D+A+ F M D +++I+G + A +L E+
Sbjct: 445 SILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSV 504
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K L+P I+ + L+EA R M+K + P
Sbjct: 505 K-GLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSP 544
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TYN ++ V + V E M +G D+ ++ + + K + +++A
Sbjct: 331 GVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEA 390
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSVYDGI 379
+LF+ M P + L+ + P + +F+ S G + Y +
Sbjct: 391 KQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFK---DMHSNGYPPNLVTYSIL 447
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L+K G D+A + +AM+N+G +PD +TY+ +I G+CK G+F+DA + E+ G
Sbjct: 448 LDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGL 507
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
P+ T I G C +D A F + MEK+ D ING
Sbjct: 508 QPNNWVCTPTIDGVCKGGLLDEAHKAF-RQMEKD---DCSPAQGCING 551
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/229 (21%), Positives = 99/229 (43%), Gaps = 11/229 (4%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
AL ++ + + K M+ AG D ++ + +I C+ + +VL ++ + G P
Sbjct: 100 ALVRMKHYKTVVSLSKQMEMAGISHDVLSLTILINCFCRLCHVDYGFSVLGKIIKLGLEP 159
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ T++ LI G C ++ RA+ F M+ + Y + ++I G + KLL
Sbjct: 160 NVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLL 219
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
E ++ V P + T++++L R + EA+++ MK P V Y S
Sbjct: 220 -EHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILP---TVVTYTSLIHG 275
Query: 562 VEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + +A + P A+ + + EG EA+ +L
Sbjct: 276 LRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 85/219 (38%), Gaps = 5/219 (2%)
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
++A M N P + + ++ L + ++ ++ +ME G D+ + TI
Sbjct: 72 INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI C VD K+++ + + LINGF + ++ A +L M+ +
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVAR- 190
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA 565
+P ++ +I+ L + E + LL MK P V + K V +A
Sbjct: 191 GYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEA 250
Query: 566 SE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F K P+ Y + N GR EA LL
Sbjct: 251 VHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLL 289
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 164/365 (44%), Gaps = 15/365 (4%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR G +TYN I+ L + + + EE+ K G+ D+ TY +
Sbjct: 63 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTL 122
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANK-Y 364
K +E+A +L M P+V S+L+ + + D L+ + K
Sbjct: 123 IDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 182
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAG 422
+ L N ++ Y+ L K EA ++M+++++ PD +T+S +I GLCK G
Sbjct: 183 DVLPNIIT---YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 239
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ ++ACN D+M G +P++ T+ L+ G C A++++RA M++K D
Sbjct: 240 QTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 297
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
VL++ F RV+ A +LL M + P TF ++I+ L + R EA + +
Sbjct: 298 VLVDAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356
Query: 543 QNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ P F + K G E AS + + K P + + + G+
Sbjct: 357 RMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA 416
Query: 599 AKDLL 603
A+D+L
Sbjct: 417 ARDIL 421
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 110/503 (21%), Positives = 202/503 (40%), Gaps = 78/503 (15%)
Query: 87 EELSPKLTHESVVYVLRKLDN-----DPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
EEL + H VV +D+ D E+A + + P+ YS+++ L
Sbjct: 105 EELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGM-SSRGCVPNVVTYSVLINGLCK 163
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEE--TYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIA 198
+ + ++ M C + TY S L G+ K++ A + DG ++ ++
Sbjct: 164 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VS 222
Query: 199 MDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
D V TL+D + K G+ E +D+ +
Sbjct: 223 PDTVTFSTLIDGLC------KCGQTDE----ACNDDMI---------------------- 250
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
GY N +TYN ++ L + + + ++E M +G D+ TY + F K +
Sbjct: 251 -AGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRV 309
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKY----------- 364
++A++L M P+V + ++ + S + + +V N+
Sbjct: 310 DEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369
Query: 365 ------------------ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
E + ++ V + + L K G+ + A ++ M N G
Sbjct: 370 IAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGV 429
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P+ +TY+ ++ GLCK+GR E+ C L+EM +GC+P+ T+ L+ C A+ D AL
Sbjct: 430 PPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQ 489
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+K+ +D D ++L++G + A +L EM+ K +P TF L
Sbjct: 490 LVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGH-QPDSFTFAACFGGL 548
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
+ L M LLR++ + P
Sbjct: 549 HRSGNLAGTMELLRVVLAKGMLP 571
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 42/383 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMME 318
G N +TY+ ++ L + + + +++EM ++ ++ +I TY K M
Sbjct: 146 GCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTA 205
Query: 319 DAVKLFEFMMDGPYK--PSVQDCSLLLRSISSINNPD---------LGLVFRVANKYESL 367
+A +L + DG + P S L+ + D G V V Y +L
Sbjct: 206 EACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVT-YNAL 264
Query: 368 GNSLSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N L K+ Y + A K R DEA +++ M + G
Sbjct: 265 VNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGC 324
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P+ +T++ +I GLCK+ R +A + ++ +PD T+ ILI G C A ++A
Sbjct: 325 TPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASA 384
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M+ KN D LI+G +V A +L +++ + + P T+ L+ L
Sbjct: 385 LFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDIL-DLMGNLGVPPNVVTYNVLVHGL 443
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSS 580
+ R+EE L M P + V + + +DA + + L S P +
Sbjct: 444 CKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDT 503
Query: 581 AAYLQVFESFFNEGRHYEAKDLL 603
Y + + + G+ +A +L
Sbjct: 504 VTYNILVDGLWKSGKTEQAITVL 526
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 12/278 (4%)
Query: 335 SVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
SV D +++L+S+ L +FR + + ++ Y+ I L K
Sbjct: 44 SVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIV--TYNTIINGLCKSNELGAGM 101
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ + + G PD +TY+ +I LCKAG E+A + M GC+P++ T+++LI G
Sbjct: 102 ELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGL 161
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIE-KVRL 510
C +D A +M K+ D +++ + ++G Q A +L+ + + +R+
Sbjct: 162 CKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRV 221
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
P TF TLI+ L + +EA N M Y P + V + K +E A
Sbjct: 222 SPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHA 279
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY 604
++++ K P Y + ++F R EA +LL+
Sbjct: 280 MIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLH 317
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 63/336 (18%), Positives = 135/336 (40%), Gaps = 19/336 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+ P+ Y+ ++ L D +++ + M + + TY ++ KA + +
Sbjct: 254 YVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE-- 311
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM-----KIELSDNFVLTVL 239
AL H GM NV T ++ G D+ G+ + ++ + D +L
Sbjct: 312 ALELLH-GMASRGCTPNVV-TFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNIL 369
Query: 240 -----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
K AL F V ++ + + +T+ ++ L + V ++++ M
Sbjct: 370 IAGACKAGNFEQASAL-FEEMVAKN--MQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G ++ TY + K +E+ + E M+ P L+ ++ + D
Sbjct: 427 LGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDD 486
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L ++ +K +S G Y+ + L K G+ ++A +++ M G +PD+ T++
Sbjct: 487 AL--QLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAAC 544
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
GL ++G +L + G +PD T + ++
Sbjct: 545 FGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 200/453 (44%), Gaps = 40/453 (8%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
++FN + D F P S ++ +L +V S Q+W E+ + + Y G+
Sbjct: 115 SYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWW---SFFNENKSKVVLDVY--SFGI 168
Query: 174 LKKA-------KKASD-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
L K +K+ D L L +F G + + TL+D G +I +K +D
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEF--GFSPNVV---IYTTLID---GCCKKGEI-EKAKD 219
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH-----------NTITYNGILR 274
+ E+ L ++ R Y V G F+ + G++ N TYN ++
Sbjct: 220 LFFEMGK---LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + +D + V +EM++ G +I TY + + + +A K+ + M P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
++ + L+ + LG + +S G S S Y+ + + G A K
Sbjct: 337 NLITYNTLIDGFCGVG--KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M+K M+ G +P +TY+ +I ++ E A + MEE G +PD+ T+++LI G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+++ A F M+EKN + + + + +I G+ + A KLL EM EK L P
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK-ELAPNV 513
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A+++ +IE L R+ +EA L+ M P
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 5/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + L K GR +A ++ M+ G + +TY+ +I GLC+ + +A V+D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ +G P++ T+ LI G C ++ +AL + + ++L++GF +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+GA K++ EM E+ ++P + T+ LI+ + +E+A+ L M++ P +
Sbjct: 390 SGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
I F G + +AS K++ K P+ Y + + EG Y A LL
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G ++A+ + M G + TY+ +I GL K G + + ++M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+E+G P++ T+ ++ C A F +M E+ + + LI G + ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
N A K +V+ ++ + P T+ TLI+ G +L +A++L R +K + P +
Sbjct: 320 NEANK-VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+S F G A++ +K + + PS Y + ++F
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 142/354 (40%), Gaps = 34/354 (9%)
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
Y++++ L KQ + +M+ED + TY ++ L K + D A F
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD--AFQVFD 292
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
+ + ++ + V ++ IG +MK+ N V+ +K I P
Sbjct: 293 EMRERGVSCNIVT-----------YNTLIGGLCREMKLN-EANKVVDQMKSDGINP---- 336
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
N ITYN ++ + ++ ++K G + TY +
Sbjct: 337 --------------NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F + A K+ + M + KPS ++L+ + + +N + + R++ E LG
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS--MEELGLV 440
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y + G+ +EA ++ K+M EP+ + Y+ +I G CK G A +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
L EMEE P++ ++ +I+ C + A KM++ D +L ++
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 154/325 (47%), Gaps = 9/325 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ +FR E +++ +N ++ L + + + ++EEM + G D+ TY +
Sbjct: 158 RAMQYFR---ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSL 214
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K ME+A +L E M+ +P++ + L+ GL ++ +
Sbjct: 215 IDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCT--GLAHQLIERMIQS 272
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G ++ + + + D+A +++ MK P+ +TY+ +I GLC AGR +A
Sbjct: 273 GTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEA 332
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
C +L EM+ G +PDI T+ LI C ++++A M+E+ D L
Sbjct: 333 CELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVA 392
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +R + A+ LL M + + P TF +L+E L +RRL+EA +LL +M++ P
Sbjct: 393 LLKSERFDEAFALLDNMFDAGAI-PNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDP 451
Query: 548 FP---EPFVQYISKFGTVEDASEFL 569
E V + K G V+DA E L
Sbjct: 452 AASTYEVLVTGLCKAGRVDDAKEVL 476
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 150/319 (47%), Gaps = 18/319 (5%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGE-HSGYK-HNTITYNGILRVLA---RHESVRDFWNVV 289
VL V+K++ + +L FFRWV H G HN T N +LR L RH +
Sbjct: 40 VLQVIKDVDV----SLFFFRWVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFR-- 93
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+E+ + + + TY + F K ME A +L M + + P V S +++++ +
Sbjct: 94 DELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNT 153
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N + FR ES+ + +++ + L K + EA +M++ M G PD
Sbjct: 154 GNLSRAMQYFR-----ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDV 208
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ +I GLCK+ R E+A +L+ M + P++ T+ LI G+C A +
Sbjct: 209 VTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIER 268
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M++ D + LI+GF + +++ A ++L +++K P T+ LI L A
Sbjct: 269 MIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAG 327
Query: 529 RLEEAMNLLRLMKKQNYPP 547
R EA LL M + P
Sbjct: 328 RANEACELLSEMDGRGILP 346
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 15/268 (5%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ N +TYN ++ + ++E M + G D+ T+ + F + ++ A +
Sbjct: 240 RPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACE 299
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M G P++ ++L+ + D G R E L + + I
Sbjct: 300 VLHLMKKGLCAPNLVTYNVLISGLC-----DAG---RANEACELLSEMDGRGILPDIITY 351
Query: 383 LTKLGRF------DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ +G F ++A ++ M G PD I+Y + L K+ RF++A +LD M +
Sbjct: 352 NSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFD 411
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G IP++ T+ L++G C + +D A A M D A +VL+ G RV+
Sbjct: 412 AGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDD 471
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKL 524
A ++LV M+ + ++P ++ T++ L
Sbjct: 472 AKEVLVMMVSE-GIQPLVSSSGTIVHTL 498
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 4/200 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ L + ++ EM G DI TY + F + +E A ++
Sbjct: 312 NLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQ 371
Query: 325 EFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
M++ G + C+L +++ + + F + + G + ++ + L
Sbjct: 372 NLMVERGVIPDGISYCTL---AVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGL 428
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
R DEA ++ M+ G +P TY ++ GLCKAGR +DA VL M G P +
Sbjct: 429 CCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLV 488
Query: 444 KTWTILIQGHCAANEVDRAL 463
+ ++ + D AL
Sbjct: 489 SSSGTIVHTLAREGKQDLAL 508
>gi|255660864|gb|ACU25601.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 484
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A + LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFLRLISSHCKSGNLDAAVDVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
Length = 1115
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 180/412 (43%), Gaps = 43/412 (10%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
S + VL VL + P+ AL +F+ VGE H T T N +L +L H V D V +
Sbjct: 90 SSDEVLGVLHSIS-DPIHALFYFKSVGELPNVVHTTETCNHMLEILRVHRRVEDMAFVFD 148
Query: 291 EMKKEGYEMDIDTYIKISRQ-------------FQKFR---------------------- 315
M+++ ++DTY+ I + +K R
Sbjct: 149 LMQRQIIRRNVDTYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSG 208
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
++A++++ M+ KPS++ S L+ ++S ++ V + + ES+G +
Sbjct: 209 FCKEALEVYRRMVSEGLKPSLKTFSALM--VASGKRRNIKTVMGLLEEMESMGLRPNIYT 266
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y R L + G+ DEA ++MK M + G PD +TY+ +I LC A + +DA + +M+
Sbjct: 267 YTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMK 326
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ PD T+ L+ +D+ + +M Y D +L+N R+N
Sbjct: 327 SSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRIN 386
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A+ LL + + K + P T+ TLI LL A RL++A++L M+ P +
Sbjct: 387 EAFDLL-DTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILL 445
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ Y K G A E + + + P+ A S GR EAK +
Sbjct: 446 IDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMF 497
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 189/459 (41%), Gaps = 60/459 (13%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP+ Y++ +R L + + + ++RM +D C + TY ++ L A+K D
Sbjct: 260 LRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDD-- 317
Query: 185 ALNQFHDGMVKEIAMDNVAK-TLVDVVLGSDWDDKIGKKLEDMKIE--LSDNFVLTVLKE 241
A+ F D V TL+D DK+ K +M+ + D T+L
Sbjct: 318 AMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTIL-- 375
Query: 242 LRIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
V AL + E G N TYN ++ L R + D ++ M
Sbjct: 376 -----VNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNM 430
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+ G E TYI + K A++ FE M P++ C+ L S++ +
Sbjct: 431 ESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGR- 489
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
LG + N+ +S G + Y+ + + +K+G+ DEA K++ M EPD I +
Sbjct: 490 -LGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVIN 548
Query: 413 QVIFGLCKAGRFEDACNVLDEMEE-----------------------------------N 437
+I L KAGR E+A + MEE +
Sbjct: 549 SLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGH 608
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+ T+ L+ C +EVD AL F KM N D + +I+GF+ Q ++ A
Sbjct: 609 GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNA 668
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
L +M K LRP T TL+ ++ + ++E+A +
Sbjct: 669 IWLFHQM--KKLLRPDHVTLCTLLPGVIKSGQIEDAFRI 705
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 15/353 (4%)
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
R V E G K + T++ ++ + +++ ++EEM+ G +I TY R +
Sbjct: 219 RMVSE--GLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGR 276
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+++A ++ + M D P V ++L+ ++ + D + + K +S + K
Sbjct: 277 DGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMC--LFTKMKSSSHKPDK 334
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y + + G D+ EK+ M+ G+ PD +T++ ++ LCKAGR +A ++LD
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDT 394
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + G +P++ T+ LI G AN +D AL F+ M + A +LI+
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454
Query: 494 VNGAYKLLVEMIEKVRLR---PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
A +E EK++ R P + L RL EA + +K P
Sbjct: 455 PGKA----LETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSV 510
Query: 551 PF---VQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEA 599
+ ++ SK G V++A + L +S V+ P + ++ + GR EA
Sbjct: 511 TYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEA 563
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 124/276 (44%), Gaps = 9/276 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K YN ++ +V WN+ EEMK G D TY + K + +
Sbjct: 785 GVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINEL 844
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN---SLSKSVYD 377
L++ M+ KP+ ++++ ++ N D + + Y +L + S + +
Sbjct: 845 FDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD-----KAMDLYYNLVSGDFSPTPCTFG 899
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K GR D+A +M M + G P++ Y+ ++ G K G + AC M +
Sbjct: 900 PLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKE 959
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+K++TIL+ C A VD AL F K+ + D D +++ING +R A
Sbjct: 960 GIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEA 1019
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
L EM + + P T+ +LI L +EEA
Sbjct: 1020 LSLFHEM-QNRGIVPDLYTYNSLILNLGIVGMIEEA 1054
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 148/342 (43%), Gaps = 11/342 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ F + H G NTIT+N +L L +++ V + +M D+ T+ I
Sbjct: 597 KAVQLFESMNGH-GCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTI 655
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-ES 366
F K +++A+ LF M V C+LL I S D FR+ +
Sbjct: 656 IHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPGVIKSGQIED---AFRITEDFFYQ 712
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G+++ +S ++ + + ++A + + D+ +I LCK +
Sbjct: 713 VGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSV 772
Query: 427 ACNVLDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A NV + +E G P +K + +LI G + V+ A F +M D + LI
Sbjct: 773 ARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLI 832
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ ++N + L EM+ + +P T+ +I L+ + RL++AM+L + ++
Sbjct: 833 DAHGKSGKINELFDLYDEMLTR-GCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDF 891
Query: 546 PPFP---EPFVQYISKFGTVEDASEFLKAL-SVKEYPSSAAY 583
P P P + + K G ++DA E + P+SA Y
Sbjct: 892 SPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 144/362 (39%), Gaps = 36/362 (9%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P+ VY+L++ + +++ W MK C + TY S++ K+ K ++L
Sbjct: 787 KPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFD 846
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT-VLKELRI 244
L +D M+ N ++ N V++ ++K R+
Sbjct: 847 L---YDEMLTRGCKPNT---------------------------ITYNMVISNLVKSNRL 876
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
L + G+ S T+ ++ L + + D + + M G + Y
Sbjct: 877 DKAMDLYYNLVSGDFS---PTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIY 933
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + K ++ A + F+ M+ +P ++ ++L+ + D L + K
Sbjct: 934 NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L L Y+ + L + R +EA + M+N G PD TY+ +I L G
Sbjct: 994 AGLDPDLV--AYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E+A + +E++ G P++ T+ LI+G+ + + A + KMM D + L
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111
Query: 485 IN 486
N
Sbjct: 1112 PN 1113
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 62/470 (13%)
Query: 124 QFRPSSTVYSLMLR----NLVNKDSLKQFWVTLRRMKED----HCYIEEETYLSILGVLK 175
+ P+ ++L+L+ +LV +D + V LR + E ++ TY +++ L
Sbjct: 71 RLAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALRILHEIIPGWDLAPDKFTYSTVVSALA 130
Query: 176 KAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
A + D AL DG+V A + V + ++ D K KL + ++L
Sbjct: 131 DAGRVDDAVALVHEMVADGVVAAEAFNPVLRAMLRA-----GDVKGAAKLFEF-MQLKGC 184
Query: 234 FVLTVLKELRIYPV-------KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
+ ++ + A+G R + E G +TY ++ L R V+D W
Sbjct: 185 VPTAATYNVLVHGLLVCGRAGAAMGVMRRM-EREGVVPGVMTYGAVVDGLVRCGRVKDAW 243
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V EEM++ G + Y + F K ++ A+K++E M+ P +P+V
Sbjct: 244 KVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPNV---------- 293
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+Y + L G+ EAE + + M ++ P
Sbjct: 294 ---------------------------VLYSAMIGGLANFGKMTEAELLFREMIDSKCAP 326
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ ITY +I G K G A +V +EM GC+P+ +++ILI G C + A++ +
Sbjct: 327 NIITYGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVW 386
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M+++ D +I G V+G +L +M+ P ++ L++ LL
Sbjct: 387 KHMLDRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLL 446
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE-DASEFLKALSVK 575
A+ L AM+LL M Q P ++ +FG E EFL+ L V+
Sbjct: 447 AKDLPRAMDLLNRMLDQGCDPDTVTCNIFLREFGAGERKGREFLEGLVVR 496
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
++ ++ + RA+ + G A K+ + M+ G P TY+ ++ GL GR A V
Sbjct: 151 VAAEAFNPVLRAMLRAGDVKGAAKLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGV 210
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL-DVLINGFL 489
+ ME G +P + T+ ++ G V A A+ ME+N A + + +I GF
Sbjct: 211 MRRMEREGVVPGVMTYGAVVDGLVRCGRVKDAWK-VAEEMERNGLARNEFVYSTVITGFC 269
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
++ A K+ M+ +RP + +I L ++ EA L R M P
Sbjct: 270 KSGEIDCALKVWEAMVAS-PVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNI 328
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEA 599
+ I + + D S +ALSV E P++ +Y + N GR +A
Sbjct: 329 ITYGSMIQGYFKIGDTS---RALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDA 382
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TYS V+ L AGR +DA ++ EM +G + + + +++ A +V A
Sbjct: 115 LAPDKFTYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGAA 173
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F M K A +VL++G L R A ++ M E+ + P T+ +++
Sbjct: 174 KLFEFMQLKGCVPTAATYNVLVHGLLVCGRAGAAMGVMRRM-EREGVVPGVMTYGAVVDG 232
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PS 579
L+ R+++A + M++ + I+ F G ++ A + +A+ P+
Sbjct: 233 LVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRPN 292
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y + N G+ EA +LL++
Sbjct: 293 VVLYSAMIGGLANFGKMTEA-ELLFR 317
>gi|255660908|gb|ACU25623.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 481
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HB T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHBRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ K E LG
Sbjct: 88 DSYGKQGIVQESVKLFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP ++ +I+G +G+ E A
Sbjct: 111 VERTLKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRXXFNVLIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L EM + ++P T+ TL+ L A ++ EA ++L+ M + P
Sbjct: 231 VSVDQVDDALRLXEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYLAPT 289
Query: 549 PEP-FVQYISK---FGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ I+ G ++ AS+ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLITSQCTSGHLDAASDVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660878|gb|ACU25608.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 484
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDXLRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGXLIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660900|gb|ACU25619.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 481
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKZGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTXINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDXALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCXSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 156/351 (44%), Gaps = 10/351 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T+N ++ + + + + +++ M +G+ D+ TY + ++DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L E M+ KP+V + L+ + + V + S G S Y+ +
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR--IKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G+ + A +++ M G P+ +TY+ ++ GLCKA R +AC V +M+ +GC
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T LI G C+A +VD L F +M+ D + L R A ++
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Query: 501 LVEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE---PFVQYI 556
L E E +R W ++ ++ LL A ++E A+ +R M + P PE V +
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE--GRHYEAKDLLYK 605
K G +A L+ + Y A F E G+ YE +D + K
Sbjct: 548 CKSGQGGEARAVLEEIMDLAYGGKARGKAA--KFVEEMVGKGYEIEDGVLK 596
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 158/349 (45%), Gaps = 7/349 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
HSG +T+ Y ++ L S D + +M + G TY I K M+E
Sbjct: 38 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLE 97
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A L + M++ + P V + ++ + + L+ N+ E LG + ++ ++
Sbjct: 98 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLL--FNEMERLGCTPNRRSHNT 155
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L + + D+A ++ M+ PD+ +Y +I GL KAG+ +A + M ++G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P T+ ++I G C A +D AL F M K ++LI+ + +++ A+
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
+LL M + + P T+ TLI L R+++A +LL M K+ P +
Sbjct: 276 RLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G +++A E L A+ S + P Y + G+ A++LL
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 150/361 (41%), Gaps = 7/361 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N ++N I+ L + + V EM+ D +Y + K +
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A KLF M+D PS ++++ + D L + S G S+ ++
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL--ELFKSMRSKGCRPSRFTFN 259
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ A K G+ DEA +++K M + G PD +TYS +I GLC R +DA ++L++M +
Sbjct: 260 ILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C P + T LI G C A + A M+ D + L++G + A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL +M+ + L P T+ L+ L A RL EA + MK P + I
Sbjct: 380 RELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438
Query: 558 KF---GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
F G V+ + F + + P Y + GR A ++L + +R +
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 498
Query: 614 S 614
+
Sbjct: 499 A 499
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 155/329 (47%), Gaps = 18/329 (5%)
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGN 369
K + DA LF+ ++ PS + L+ + N+ D +F N+ G
Sbjct: 20 LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR---GC 76
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S Y+ I A K G +EA ++K M G PD +TY+ V+ GLCK+GR E+A
Sbjct: 77 PPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALL 136
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EME GC P+ ++ +I G C +++D+A F +M ++ D+ +LI+G
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLA 196
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
++N AYKL M++ + P T+ +I + A L+EA+ L + M+ + P
Sbjct: 197 KAGKLNEAYKLFRRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 550 EPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL-- 603
F + K G +++A LK ++ + P Y + + R +A+ LL
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 604 ---YKC-PHHIRQDSKISLLFGSAKSNKV 628
+C P + Q+ +L+ G K+ ++
Sbjct: 316 MVKRQCKPTVVTQN---TLIHGLCKAGRI 341
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M PD+ +Y +I GL KAG+ DA ++ ++ +G P +T LI G C AN
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
D A FA M + +V+I+ + + A L+ +MIE + P T+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVK 575
T+++ L + R+EEA+ L M++ P + + + ++ A + + +
Sbjct: 120 TVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAR 179
Query: 576 EYPSSA-AYLQVFESFFNEGRHYEAKDLLYK 605
+ P + +Y + + G+ EA L +
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210
>gi|255660906|gb|ACU25622.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 484
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 171/362 (47%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ ++ K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDIPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTIINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA ++L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMTEARSILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSQCNSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKAGQYDQAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/401 (25%), Positives = 174/401 (43%), Gaps = 32/401 (7%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
L+ +V +L LR P AL FF+W G G++H T +Y I+ ++ R D + V
Sbjct: 68 LAPIWVSKILLGLREDPKLALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTV 127
Query: 290 EEMKKEGYEMDID----------------------TYIKISRQFQKFRMMEDAVKLFEFM 327
+E+ MD+ + + F + ++E+A + F M
Sbjct: 128 KEVIMNS-RMDMGFPVCNIFDMLWSTRNICVSGSGVFDVLFSVFVELGLLEEANECFSRM 186
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ P + C+ LL +S N L V + N G + S Y+ + L K G
Sbjct: 187 RNFRTLPKARSCNFLLHRLSKSGNGQL--VRKFFNDMIGAGIAPSVFTYNVMIDYLCKEG 244
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ + ++ M+ G PD +TY+ +I G K G E+ ++ +EM++ GC+PDI T+
Sbjct: 245 DLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYN 304
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI +C ++ RA F++M + LI+ F + + GA KLL +M +
Sbjct: 305 GLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDM-RR 363
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM----KKQNYPPFPEPFVQYISKFGTVE 563
L P + T+ +LI+ A L EA LL M K N + + + K G +
Sbjct: 364 TGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT-ALLDGLCKAGRMI 422
Query: 564 DASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+A E ++ L P+ Y + + R +A +L
Sbjct: 423 EAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKIL 463
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 145/347 (41%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYNG++ + E + + EMK G + ++ TY + F K MM+ A
Sbjct: 295 GCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGA 354
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KL M P+ + L+ + N L +++ N G L+ Y +
Sbjct: 355 IKLLXDMRRTGLLPNEFTYTSLIDANCKAGN--LTEAWKLLNDMLQAGVKLNIVTYTALL 412
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR EAE++ ++M G P+ Y+ ++ G KA R EDA +L +M E
Sbjct: 413 DGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIK 472
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ + +I GHC+ +++ L +M + A+ + +I+ + + + A
Sbjct: 473 PDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNF 532
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EM + V + T+ LI+ L A +E A++ M P + I
Sbjct: 533 FQEM-QDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591
Query: 560 --GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+E A + + + P A+ + + G EA L+
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLI 638
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 149/335 (44%), Gaps = 9/335 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ + S+ + ++ EMK G DI TY + + KF M A
Sbjct: 260 GLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRA 319
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M + KP+V S L+ + + ++ G ++ Y +
Sbjct: 320 FEYFSEMKNNGLKPNVVTYSTLIDAFC--KEGMMQGAIKLLXDMRRTGLLPNEFTYTSLI 377
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A K G EA K++ M AG + + +TY+ ++ GLCKAGR +A V M ++G
Sbjct: 378 DANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGIS 437
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ + +T L+ G+ A ++ A+ +M E N D L +I G SQ+++ +
Sbjct: 438 PNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLI 497
Query: 501 LVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
L EM + + P +T T+I+ A + +A+N + M+ + I
Sbjct: 498 LEEMKSRGISANPVIST--TIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGL 555
Query: 560 ---GTVEDASE-FLKALSVKEYPSSAAYLQVFESF 590
G VE A + F + LS+ P+ A Y + +
Sbjct: 556 CEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGL 590
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 34/320 (10%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G K N +TY +L L + + + V M K+G + Y + + K ME
Sbjct: 398 QAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERME 457
Query: 319 DAVKLFEFMMDGPYKPSV----------------QDCSLLL-----RSISS---INNPDL 354
DA+K+ + M + KP + ++ L+L R IS+ I+ +
Sbjct: 458 DAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTII 517
Query: 355 GLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
F+ ++L G + Y + L + G + A M + G +
Sbjct: 518 DAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQ 577
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ Y+ +I GLC E A + DEM+ G PDI +T LI G+ + AL+
Sbjct: 578 PNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVL 637
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++M E + D + L++GF ++ A K EMIEK L P + L+ +
Sbjct: 638 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGIL-PEEVLCICLLREYY 696
Query: 526 GARRLEEAMNLLRLMKKQNY 545
+L+EA+ L M++ Y
Sbjct: 697 KRGQLDEAIELKNEMERMAY 716
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 75/380 (19%), Positives = 146/380 (38%), Gaps = 49/380 (12%)
Query: 104 KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIE 163
KL ND +A N V Y+ +L L + + R M +D
Sbjct: 391 KLLNDMLQAGVKLNIV-----------TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPN 439
Query: 164 EETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD-WDDKIGKK 222
++ Y +++ KA++ D + +K++ N+ L+ + GS W +K
Sbjct: 440 QQVYTALVHGYIKAERMEDAMKI-------LKQMTECNIKPDLI--LYGSIIWGHCSQRK 490
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
LE+ K+ +L+E++ G N + I+ +
Sbjct: 491 LEETKL---------ILEEMK---------------SRGISANPVISTTIIDAYFKAGKS 526
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
D N +EM+ G E I TY + + ++E AV F M+ +P+V + L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ + N + ++ ++ + G + + + + K G EA ++ M
Sbjct: 587 IDGLCXNNCIESAK--KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTEL 644
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
E D Y+ ++ G + G A +EM E G +P+ L++ + ++D A
Sbjct: 645 AIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEA 704
Query: 463 LLCFAKM--MEKNYDADADL 480
+ +M M +++ DA L
Sbjct: 705 IELKNEMERMAYSFEFDAQL 724
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 38/285 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
EH K + +TY I+ L + + D + EM+ +G + ++ TY + F F
Sbjct: 257 EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRW 316
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D +L M+ P+V S L+ S
Sbjct: 317 DDGAQLLRDMITRKITPNVVTFSALIDS-------------------------------- 344
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
L K G+ EA+ + M G EP+ ITY+ +I+GLC R ++A ++D M
Sbjct: 345 -----LVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK 399
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PDI T+ ILI G C A +VD + F KM + AD LI GF +++ A
Sbjct: 400 GCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVA 459
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
K+ EM+ + + P T+ L++ L LEEA+ +L M K
Sbjct: 460 KKVFQEMVSQ-GVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 150/344 (43%), Gaps = 9/344 (2%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
H T G LR A +S +F+ V+ + + +Y + R +DAV L
Sbjct: 18 HLRSTETGTLRNAAFFQSPYEFFFCVQGFSGLTSDRKMSSYKERLRSGLVDIKKDDAVAL 77
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F+ M+ P+V D + L ++ D LV + + E G + + +
Sbjct: 78 FQSMLRSRPLPTVIDFNRLFGLLARTKQYD--LVLALCKQMELKGIAYDLYTLNIMINCF 135
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ + A M + G+EP+ +T++ ++ GLC GR +A ++D M + +PD+
Sbjct: 136 CRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDL 195
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T ++ G C + V A+ A+MM + ++N A LL +
Sbjct: 196 ITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRK 255
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK----KQNYPPFPEPFVQYISKF 559
M E +++P T+ +I+ L RL++A++ M+ K N + + S F
Sbjct: 256 M-EHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCS-F 313
Query: 560 GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
G +D ++ L+ ++ K P+ + + +S EG+ EAKDL
Sbjct: 314 GRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDL 357
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 125/287 (43%), Gaps = 13/287 (4%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
I +N + +LAR + + ++M+ +G D+ T + F + R + A
Sbjct: 90 VIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMG 149
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD-----GIH 380
+ Y+P+ + LL + G VF + + LS+ V D I
Sbjct: 150 KIFKLGYEPNTVTFNTLLNGLCL-----EGRVFEAVELVDCM--VLSQHVPDLITLNTIV 202
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L R EA ++ M G +P+ TY ++ +CK+G A ++L +ME
Sbjct: 203 NGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIK 262
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+TI+I C +D AL F++M K A+ + LI F S R + +L
Sbjct: 263 PHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQL 322
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +MI + ++ P TF LI+ L+ +L EA +L M + P
Sbjct: 323 LRDMITR-KITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 125/278 (44%), Gaps = 5/278 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + NTITYN ++ L + + + +++ M +G + DI TY + F K + ++D
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++LF M + G +V +L+ S L + +V + S G Y +
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQS---RKLIVAKKVFQEMVSQGVHPGIMTYAIL 481
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L G +EA ++ M E D Y+ +I G+C A + +DA ++ + G
Sbjct: 482 LDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGV 541
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
DI+++ I++ G C + + A F KM E Y+ D + LI L + + +
Sbjct: 542 KRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQ 601
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
L+ EM ++ +T K +++ L + +N+L
Sbjct: 602 LIEEM-KRCGFSSDASTVKIVMDMLSSGELDKSFLNML 638
>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 47/431 (10%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLK-ELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
W K LE +K++L V VLK ++ ++ VK + FF+W G+ ++H++ TY ++
Sbjct: 75 WGPDAEKALEVLKLKLDIRLVREVLKIDVEVH-VK-IQFFKWAGKKRNFEHDSTTYMALI 132
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
R L + V + W +++M K + +I + + +M+ A+ +F + +
Sbjct: 133 RCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCR 192
Query: 334 PSVQDC-SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDE 391
P+ S++L + ++ V + N+ S G+ +V Y + A KL R D
Sbjct: 193 PTAGTYNSVILMLMQEGHHEK---VHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDS 249
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A ++ MK G +P Y+ ++ K G+ E+A N++ EM C+P + T+T LI+
Sbjct: 250 AVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIR 309
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM------- 504
G + V+ A + M++ D L++ LIN R+ A +L EM
Sbjct: 310 GLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTP 369
Query: 505 ----------------------------IEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
++K + P T+ LI+ R+E+A+ L
Sbjct: 370 NVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLL 429
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEYPSSA-AYLQVFESFFN 592
L M ++ +PP P + I+ G E A+E + L SS Y + + F
Sbjct: 430 LEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGK 489
Query: 593 EGRHYEAKDLL 603
GR EA L
Sbjct: 490 CGRFNEAMGLF 500
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 217/566 (38%), Gaps = 84/566 (14%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L KL V VL K+D + FF W K+ F ST Y ++R
Sbjct: 75 WGPDAEKALEVLKLKLDIRLVREVL-KIDVEVHVKIQFFKWAGKKRNFEHDSTTYMALIR 133
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYI---EEETYLSILGVLKKAKKASD------------ 182
L + + W T++ M + C I E + ILG +K KA
Sbjct: 134 CLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVKILGRVKMVNKALSIFYQVKGRKCRP 193
Query: 183 ---------LAALNQFHDGMVKEI--AMDNVAKTLVDVVLGSDWDDKIGK-KLEDMKIEL 230
L + + H V E+ M + D V S GK +D + L
Sbjct: 194 TAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSAVRL 253
Query: 231 SDNFVLTVLKEL-RIYPVKALGFFRW--VGEHSGYKH---------NTITYNGILRVLAR 278
D L+ +IY +F+ V E H TY ++R L +
Sbjct: 254 FDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRGLGK 313
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
V D + V + M K+G + D+ + + +++AV+LFE M P+V
Sbjct: 314 SGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTPNVVT 373
Query: 339 CSLLLRSISSINNPDL------------GLV------------FRVANKYESL------- 367
+ +++S+ P G+V F N+ E
Sbjct: 374 YNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLLLEEM 433
Query: 368 ---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G + Y + +L K R++ A ++ + +K Y+ +I K GRF
Sbjct: 434 DEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGKCGRF 493
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + +EM++ GCIPD+ + LI G A+ +D A F M E + D + +++
Sbjct: 494 NEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINSHNII 553
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+NG G K +EM K++ ++P ++ T++ L A EEA +LMK
Sbjct: 554 LNGLAR----TGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEAT---KLMK 606
Query: 542 KQNYPPFPEPFVQYISKFGTVEDASE 567
+ N F + Y S V E
Sbjct: 607 EMNSKGFEYDLITYSSILEAVGKVDE 632
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 13/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + T+ ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 121 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 180
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + ++ G S Y +
Sbjct: 181 IRLLRSMEQGNCQPDVVIYTSIIDSLC--KDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 238
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ PD + +S V+ LCK G+ +A ++D M + G
Sbjct: 239 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 298
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ GHC +E+D A+ F M+ K + D LING+ +++ A L
Sbjct: 299 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 358
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
EM K + P T+ TL+ L RL++A+ L M + P V Y
Sbjct: 359 FEEMCRKEWI-PDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMP---DLVTYSILLD 414
Query: 556 -ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K +E+A LKA+ P Y + + G A+DL
Sbjct: 415 SLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDL 463
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 143/349 (40%), Gaps = 42/349 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E + + + Y I+ L + V + +N+ +M +G DI TY +
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ L M++ P V ++
Sbjct: 248 KHVTTLLNQMVNSKILPDV-------------------------------------VIFS 270
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K G+ EA +++ M G EPD +TY+ ++ G C ++A V D M
Sbjct: 271 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 330
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ ++T LI G+C +++D+A+ F +M K + D + L++G R+ A
Sbjct: 331 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDA 390
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
L EM+ + ++ P T+ L++ L LEEAM LL+ ++ N P + + +
Sbjct: 391 IALFHEMVARGQM-PDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449
Query: 555 YISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + G +E A + LS K +PS Y + G EA L
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKL 498
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 179/427 (41%), Gaps = 47/427 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + Y SI+ L K ++ ++
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE-- 214
Query: 185 ALNQFHDGMVKEIAMDNVAKT-LVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + I+ D T LV + +W V T+L ++
Sbjct: 215 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW-----------------KHVTTLLNQM 257
Query: 243 ---RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+I P + + ++ ++ L + V + +V+ M + G E
Sbjct: 258 VNSKILP------------------DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VF 358
D+ TY + M++AVK+F+ M+ + P V + L+ I+ D + +F
Sbjct: 300 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 359
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ E + ++ Y+ + L +GR +A + M G PD +TYS ++ L
Sbjct: 360 EEMCRKEWIPDT---KTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK E+A +L +E + PDI+ + I+I G C A E++ A F+ + K
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+++I+G + +N A KL +EM + P T+ T+ L A+ LL
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEM-DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLE 535
Query: 539 LMKKQNY 545
M + +
Sbjct: 536 EMLARGF 542
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+V ++L+ S +N +G F V K LG+ + + + R L G+ EA
Sbjct: 89 PNVYTLNILINSFCHLNR--VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 146
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M + GF+P+ +TY +I GLCK G A +L ME+ C PD+ +T +I
Sbjct: 147 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 206
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F++M+ + D L++ + LL +M+ ++ P
Sbjct: 207 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPD 265
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L ++ EA ++ +M ++ P
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 299
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K + ++ +M+ G P++ T ILI C N V A
Sbjct: 54 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
AK+++ + D LI G + ++ A L +MI++ +P T+ TLI L
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE-GFQPNVVTYGTLINGLC 172
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
A+ LLR M++ N P
Sbjct: 173 KVGNTSAAIRLLRSMEQGNCQP 194
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 170/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKQGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETXN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKVGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660892|gb|ACU25615.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 481
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FF WV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFXWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKQGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA-MNLLRLMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA + L +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVXLKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A + V E+F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNLDAAADVLKAMXRLSVPTEAGHYGVLIENFCKXGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 160/363 (44%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ AD + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSADLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 111/426 (26%), Positives = 195/426 (45%), Gaps = 33/426 (7%)
Query: 126 RPSSTVYSLMLRNLVN---KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL---KKAKK 179
+PS + + N++ K+ L + + +MK+ C+ + +Y +IL VL + K
Sbjct: 186 KPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKT 245
Query: 180 ASDLAALNQF-HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE--DMKIELS---DN 233
+ LN+ G+V N ++ G + ++ K + + +E S D
Sbjct: 246 DQSIDKLNELLESGLVPHQITYNT------IIHGYCREGQVEKAFQFRNKMVEKSFKPDL 299
Query: 234 FVLTVLKELRIYPVK-----ALGFFR-WVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
F +L LR + AL F W+ + G + +TYN I+ L + + ++
Sbjct: 300 FTCNIL--LRGLCTEGMLDNALKLFNTWISK--GKAIDAVTYNTIISGLCKEGRFEEAFD 355
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFR-MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
++ EM+++ D TY I +E A + M++ +KP + C++LLR +
Sbjct: 356 LLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFE 405
+ D L ++ N + S G ++ Y+ I L K GRF+EA ++ M+ G
Sbjct: 416 CTEGMLDNAL--KLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLV 473
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I G C+ G+ E A ++M E PD+ T IL++G C + +AL
Sbjct: 474 PDQTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKL 533
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F + K DA + +I+G + R A+ LL EM EK +L P T+ ++ L
Sbjct: 534 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEK-KLGPDCYTYNAILCALA 592
Query: 526 GARRLE 531
A R+E
Sbjct: 593 DAGRME 598
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 164/363 (45%), Gaps = 10/363 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVL--ARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
+A+G + + S + N +YN IL VL R + + E+ + G TY
Sbjct: 210 EAIGLIGKMKDFSCFPDNA-SYNTILDVLWLCRSGKTDQSIDKLNELLESGLVPHQITYN 268
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
I + + +E A + M++ +KP + C++LLR + + D L ++ N +
Sbjct: 269 TIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNAL--KLFNTWI 326
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-GRF 424
S G ++ Y+ I L K GRF+EA ++ M+ PD TY+ ++ L A G+
Sbjct: 327 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQV 386
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E A ++M E PD+ T IL++G C +D AL F + K DA + +
Sbjct: 387 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTI 446
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+G + R A+ LL EM EK L P Q T+ T+I ++E+A M +++
Sbjct: 447 ISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKS 506
Query: 545 YPP---FPEPFVQYISKFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ P ++ + + G + A + +S + + Y + EGR EA
Sbjct: 507 FKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAF 566
Query: 601 DLL 603
DLL
Sbjct: 567 DLL 569
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 96/179 (53%), Gaps = 4/179 (2%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV--IFGLCKAGRFEDAC 428
LSK+++ + + K + EA ++ MK+ PDN +Y+ + + LC++G+ + +
Sbjct: 191 LSKAIFTNVIKFGVK-NKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSI 249
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ L+E+ E+G +P T+ +I G+C +V++A KM+EK++ D ++L+ G
Sbjct: 250 DKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 309
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ ++ A KL I K + T+ T+I L R EEA +LL M+++ P
Sbjct: 310 CTEGMLDNALKLFNTWISKGKAID-AVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGP 367
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 158/359 (44%), Gaps = 8/359 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL + H G K + +TY +L+ L E ++ + EM D T+ I
Sbjct: 250 EALNILSDLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTI 308
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ +++ A+K+ + M + P + S +L + + D + + ++ +S
Sbjct: 309 VTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV--ELLSRLKSY 366
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G Y + + L + +++ AE++M M + PD +T++ VI LC+ G + A
Sbjct: 367 GCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRA 426
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V+++M ENGC PDI T+ +I G C +D A+ + + D + L+ G
Sbjct: 427 IKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
S R A +L+V M+ P TF T+I L L +A+ L++M + P
Sbjct: 487 LCSVDRWEDAEQLMVNMMHS-DCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIP 545
Query: 548 FPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ V + K G ++A + L ++ P Y V + G+ EA DLL
Sbjct: 546 NQSTYNIVVDALLKAGKTQEALKLLSGMT-NGTPDLITYNTVISNITKAGKMEEALDLL 603
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 164/382 (42%), Gaps = 38/382 (9%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + +TY+ +L + R +++EM+ +G E DI TY + ++
Sbjct: 190 HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVD 249
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSI-----------------SSINNPD-------- 353
+A+ + + KP + +L+S+ S+ PD
Sbjct: 250 EALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIV 309
Query: 354 -----LGLVFR---VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
GLV R V + G Y I L +GR D+A +++ +K+ G +
Sbjct: 310 TSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCK 369
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD I Y+ V+ GLC ++E A ++ EM + C PD T+ +I C VDRA+
Sbjct: 370 PDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKV 429
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M E + D + +I+G +++ ++ A +LL + + +P TF TL++ L
Sbjct: 430 VEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL-QSYGCKPDIVTFNTLLKGLC 488
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSA 581
R E+A L+ M + PP F I+ G + A E LK ++ P+ +
Sbjct: 489 SVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQS 548
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y V ++ G+ EA LL
Sbjct: 549 TYNIVVDALLKAGKTQEALKLL 570
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 191/464 (41%), Gaps = 71/464 (15%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKAKK 179
+P + Y+ +L++L + K+ M + C +E T+ +I+ G++ +A K
Sbjct: 264 KPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIK 323
Query: 180 ASDLAALNQFHDGMVKEIAM-DNVAKTLVDVVLGSDWDDKIG--KKLEDMKIELSDNFVL 236
D + G + +I ++ L DV DD + +L+ +
Sbjct: 324 VVD----HMSEHGCIPDIVTYSSILDGLCDV---GRVDDAVELLSRLKSYGCKPDTIAYT 376
Query: 237 TVLKELRIYPVKALGFFRWVGEH----------SGYKHNTITYNGILRVLARHESVRDFW 286
TVLK L +W EH S + +T+N ++ L + V
Sbjct: 377 TVLKGL-------CSIEQW--EHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
VVE+M + G DI TY I R ++DA++L + KP + + LL+ +
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487
Query: 347 SSINN-----------------PDL-------------GLVFRVANKYESL---GNSLSK 373
S++ PD GL+ + + + G ++
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S Y+ + AL K G+ EA K++ M N PD ITY+ VI + KAG+ E+A ++L
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRV 605
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M NG PD T+ L G C + DRA+ ++ + DA + ++ GF R
Sbjct: 606 MVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWR 665
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ A M+ + P ++T+ L+E L L+EA LL
Sbjct: 666 TDIAIDCFAHMVSSGCM-PDESTYIILLEALAYECLLDEAKQLL 708
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/351 (22%), Positives = 149/351 (42%), Gaps = 7/351 (1%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ +T T+N ++R L V D V ++M G + TY + K A+
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L + M +P + ++L+ ++ N D+ + + S G Y + +
Sbjct: 218 VLLDEMRAKGCEPDIVTYNVLINAMC--NEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+L R+ E E++ M + PD +T++ ++ LC+ G + A V+D M E+GCIP
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DI T++ ++ G C VD A+ +++ D ++ G S ++ A +L+
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG- 560
EM+ P + TF T+I L ++ A+ ++ M + P + I
Sbjct: 396 AEMVCS-DCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454
Query: 561 --TVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
++DA E L L S P + + + + R +A+ L+ H
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH 505
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 137/310 (44%), Gaps = 26/310 (8%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDG---------PYKPSVQDCSLLLRSISSINNPDLGLVFR 359
R + ++DA+ L + + G P P C++L++ + S G V
Sbjct: 66 RSLIQREEIDDALALVDSIASGGGSGKCLPLPVVP----CNILIKRLCS-----GGRVAD 116
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ +LG S + Y+ + + GR ++A +++ M F PD T++ +I LC
Sbjct: 117 AERVFATLGASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALC 173
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
GR DA V D+M GC P + T++IL+ C A+ +A++ +M K + D
Sbjct: 174 VRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIV 233
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+VLIN ++ V+ A +L ++ +P T+ +++ L G+ R +E L
Sbjct: 234 TYNVLINAMCNEGDVDEALNILSDLPSH-GCKPDAVTYTPVLKSLCGSERWKEVEELFAE 292
Query: 540 MKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGR 595
M P F V + + G V+ A + + +S P Y + + + GR
Sbjct: 293 MASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGR 352
Query: 596 HYEAKDLLYK 605
+A +LL +
Sbjct: 353 VDDAVELLSR 362
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 102/454 (22%), Positives = 188/454 (41%), Gaps = 34/454 (7%)
Query: 109 PEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYL 168
P+ + F + + + PS YS++L +Q V L M+ C + TY
Sbjct: 179 PDALAVFDDML--HRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYN 236
Query: 169 SILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSD-WDDKIGKKLEDM 226
++ + + ALN D D V T ++ + GS+ W K++E++
Sbjct: 237 VLINAMCNEGDVDE--ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERW-----KEVEEL 289
Query: 227 KIELSDN----------FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
E++ N ++T L + + +A+ + EH G + +TY+ IL L
Sbjct: 290 FAEMASNKCAPDEVTFNTIVTSLCQQGLVD-RAIKVVDHMSEH-GCIPDIVTYSSILDGL 347
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
V D ++ +K G + D Y + + E A +L M+ P
Sbjct: 348 CDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDE 407
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAE 393
+ ++ S+ GLV R E + G + Y+ I L D+A
Sbjct: 408 VTFNTVIASLCQ-----KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAM 462
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+++ +++ G +PD +T++ ++ GLC R+EDA ++ M + C PD T+ +I
Sbjct: 463 ELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSL 522
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C + +A+ M E + +++++ L + A KLL M P
Sbjct: 523 CQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGT---PD 579
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ T+I + A ++EEA++LLR+M P
Sbjct: 580 LITYNTVISNITKAGKMEEALDLLRVMVSNGLSP 613
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 114/277 (41%), Gaps = 31/277 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + +TYN I+ L + D ++ ++ G + DI T+ + + E
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494
Query: 319 DAVKLFEFMMDGPYKP----------SVQDCSLLLRSISSIN--------------NPDL 354
DA +L MM P S+ LLL++I ++ N +
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Query: 355 GLVFRVANKYESL-------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ + E+L + Y+ + +TK G+ +EA +++ M + G PD
Sbjct: 555 DALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPD 614
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
ITY + +G+C+ + A +L +++ G PD + ++ G C D A+ CFA
Sbjct: 615 TITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFA 674
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
M+ D +L+ + ++ A +LLV +
Sbjct: 675 HMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711
>gi|255660862|gb|ACU25600.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 484
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 167/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ M + P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 549 PEPFVQYI----SKFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
+ + K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 290 DNSIIMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 148/321 (46%), Gaps = 17/321 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TY ++ AR + + + ++EEM++ G ++ TY + K M+ A
Sbjct: 174 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 233
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ + M++G + P+V + L+ N D + + LG ++K +
Sbjct: 234 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD--------DARKLLGIMVAKGMRPNVV 285
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K +F EA+++++ MK G PD TYS +I GLCKA + E+A +L M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+GC PD+ ++ +I C + ++ A +M ++ D + +I+G ++
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A +L +M E + P T+ T+I L + L EA LL M K P +
Sbjct: 406 AEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465
Query: 555 YI---SKFGTVEDASEFLKAL 572
I K G +E+A L+ +
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGM 486
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 182/442 (41%), Gaps = 51/442 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY---------LSILGVLKKA 177
P+ Y+ ++ L++ L M+E C TY LS++G +
Sbjct: 177 PNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDV 236
Query: 178 KK-------ASDLAALNQFHDGMVKEIAMDNVAKTL---------VDVVLGSDWDDKIGK 221
K A ++ N DG K +D+ K L +VV S D + K
Sbjct: 237 VKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCK 296
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHES 281
+ ++ + VL+E++ G + TY+ ++ L + +
Sbjct: 297 SQKFLEAK-------EVLEEMKT---------------RGVTPDAFTYSALIHGLCKADK 334
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+ + ++ M G D+ Y I F K + +A K + M P V +
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDEAEKMMKAMK 400
++ + + V + + + G+ L V Y + L K EA+K++ M
Sbjct: 395 VIDGLCKLGKIAEAQV--ILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMC 452
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
AG PD +TY+ +I GLCK GR E+A +L M+ GC P++ T+T LI G C A +VD
Sbjct: 453 KAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVD 512
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE-KVRLRPWQATFKT 519
A +M + + ++NG R+ A +L+ M + + P AT++T
Sbjct: 513 EAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRT 572
Query: 520 LIEKLLGARRLEEAMNLLRLMK 541
++ L+ + ++EA LL MK
Sbjct: 573 IVNALMSSDLVQEAEQLLEQMK 594
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 151/360 (41%), Gaps = 46/360 (12%)
Query: 249 ALGFFRWV-GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
AL FFRW G+ H ++N +L+VL R + R+ ++ E D+ +Y +
Sbjct: 59 ALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIV 118
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F + A++L E M + P
Sbjct: 119 ISGFCNAGDLHAALELLEEMKSAGFAPDA------------------------------- 147
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ I A+ G D A M +++ G +P+ +TY+ +I +A + E+A
Sbjct: 148 ------FTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEA 198
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L+EM E GC P++ T+ +L+ C + V A KM+E + + + L++G
Sbjct: 199 MKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDG 258
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F + V+ A KLL M+ K +RP T+ LI+ L +++ EA +L MK + P
Sbjct: 259 FCKRGNVDDARKLLGIMVAK-GMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTP 317
Query: 548 FP---EPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K +E+A + L+ ++ P Y + +F G+ EA+ L
Sbjct: 318 DAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTL 377
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 162/350 (46%), Gaps = 13/350 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + T+ I+ +A + D ++ ++ G + ++ TY + F + + +E+
Sbjct: 141 AGFAPDAFTHTPIITAMA---NAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEE 197
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KL E M + P++ ++L+ ++ ++ +G V K G + + ++ +
Sbjct: 198 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSM--VGAAQDVVKKMIEGGFAPNVMTFNSL 255
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D+A K++ M G P+ +TYS +I GLCK+ +F +A VL+EM+ G
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T++ LI G C A++++ A +M D + +I+ F ++ A K
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQ 554
L EM K R P T+ T+I+ L ++ EA +L M++ P+ +
Sbjct: 376 TLQEM-RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESG-DVLPDVVTYSTVIN 433
Query: 555 YISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K + +A + L + P Y + + GR EA+ LL
Sbjct: 434 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLL 483
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 120/277 (43%), Gaps = 8/277 (2%)
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P+ + ++ R ++S+ + L L F G S + ++ + + L + +
Sbjct: 35 PFSGASTTPRIVGRVVNSLKDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHR 94
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA + ++ A EPD +Y+ VI G C AG A +L+EM+ G PD T T +I
Sbjct: 95 EAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPII 154
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
A ++D A+ M D + LI F K++ A KLL EM E+
Sbjct: 155 TAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRER-GC 210
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P T+ L++ L + A ++++ M + + P F + F G V+DA +
Sbjct: 211 PPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARK 270
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
L + K P+ Y + + + EAK++L
Sbjct: 271 LLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 10/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G++ N +TY +L+V+ + ++ +M++ ++D Y I K ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYD 377
+A LF M +K + + L+R D G + R K + + ++ +
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA---FS 321
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EAE++ K M G PD +TY+ +I G CK + + A ++LD M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++ A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + R+RP ++K L++ L E+A+ + ++K +
Sbjct: 442 KELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA DLL++
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFR 551
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 163/349 (46%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G HN T + ++ R + ++ + ++ K GYE D T+ + +
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A++L + M++ +KP++ + L+ + +N V + E+ G ++ Y
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVET-GFQPNEVTYG 216
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + K G+ A ++++ M+ + D + YS +I GLCK G ++A N+ +EME
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G DI +T LI+G C A D M+++ D LI+ F+ + ++ A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L EMI++ + P T+ +LI+ +L++A ++L LM + P F +
Sbjct: 337 EELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 555 YISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDL 602
K ++D E + +S++ + + Y + + F G+ AK+L
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 34/323 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L + S+ + +N+ EM+ +G++ DI Y + R F
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 318 EDAVKLFEFMMDGPYKPSVQ------DC---------------SLLLRSIS--SINNPDL 354
+D KL M+ P V DC ++ R IS ++ L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 355 GLVFRVANKYESLGNSLSKSVYDG----------IHRALTKLGRFDEAEKMMKAMKNAGF 404
F N+ + + L V G + K D+ ++ + M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D +TY+ +I G C+ G+ E A + EM PDI ++ IL+ G C E ++AL
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F K+ + + D + +++I+G + +V+ A+ L + K ++P T+ +I L
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGL 537
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
L EA L R M++ + P
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSP 560
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 127/289 (43%), Gaps = 7/289 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DAV LF+ M +P + D S L ++ D LV + + E G + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + A M + G+EPD +T+S +I GLC GR +A ++D M E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T L+ G C +V A+L +M+E + + ++ + A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL +M E+ +++ + +I+ L L+ A NL M+ + + + I
Sbjct: 232 MELLRKMEER-KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 558 KF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
F G +D ++ L+ + K P A+ + + F EG+ EA++L
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 106/514 (20%), Positives = 194/514 (37%), Gaps = 99/514 (19%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y +L+ + LR+M+E ++ Y I+ L K S
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL--CKDGSLDN 265
Query: 185 ALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F++ +K D + T + WDD K L DM +
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG-AKLLRDMI-------------KR 311
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+I P + + ++ ++ + +R+ + +EM + G D
Sbjct: 312 KITP------------------DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVA 361
TY + F K ++ A + + M+ P+++ ++L+ N D GL +FR
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR-- 411
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K G Y+ + + +LG+ + A+++ + M + PD ++Y ++ GLC
Sbjct: 412 -KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 422 GRFEDACNVLDEMEEN-----------------------------------GCIPDIKTW 446
G E A + +++E++ G PD+KT+
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
I+I G C + A L F KM E + + ++LI L + + KL IE
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKL----IE 586
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+++ + F + A L A++ L M K + P F + F E+AS
Sbjct: 587 EIK----RCGFS------VDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENAS 636
Query: 567 EF--------LKALSVKEYPSSAAYLQVFESFFN 592
+ +KA+ K P+ Y V + N
Sbjct: 637 VYDAPTLFKNMKAMGYK--PNVVTYNTVIKGLLN 668
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 104/258 (40%), Gaps = 33/258 (12%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P KAL F + E S + + YN I+ + V D W++ + +G + D+ TY
Sbjct: 473 PEKALEIFEKI-EKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K + +A LF M + + P+ ++L+R+ + D ++ + +
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRA--HLGEGDATKSAKLIEEIK 589
Query: 366 SLGNSLSKSVYDGIHRALTKLGRF---------------------------DEAEKMMKA 398
G S+ S + AL+ L R +A + K
Sbjct: 590 RCGFSVDAST---LRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKN 646
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
MK G++P+ +TY+ VI GL VLD+M E GC P+ T + I G C +
Sbjct: 647 MKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDL 706
Query: 459 VDRALLCFAKMMEKNYDA 476
A+L KM N D
Sbjct: 707 HGSAILLLRKMENDNEDV 724
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/350 (27%), Positives = 161/350 (46%), Gaps = 15/350 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +T++ +L L+ + D + +EM K GYE D+ TY I K A
Sbjct: 42 GLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMA 101
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
++L + M + KP+V S ++ S+ + + + + N+ G S + Y
Sbjct: 102 IQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNR----GISPNVVTYSS 157
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I LGR +EA + K M PD +T++ ++ GL K G +A V + M E G
Sbjct: 158 ILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKG 217
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P++ T+ L+ G+C+ +++D A F M+ K ++LI G R++ A
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI-- 556
LL EM K L P T+ TL++ R ++A LL M+ +Y P+ I
Sbjct: 278 GLLAEMSHKA-LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR--SYGLLPDLMTYSIVL 334
Query: 557 ---SKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G +++A E LKA+ K P+ Y + + N G+ A++L
Sbjct: 335 DGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAAREL 384
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 156/344 (45%), Gaps = 12/344 (3%)
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ H+ ++V+ M K G + + T+ + + DAVKLF+ M+ Y+P V
Sbjct: 23 SNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDV 82
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
S ++ + + + + + ++ K E G + VY I +L K EA + +
Sbjct: 83 ITYSTIINGLCKMGSTTMAI--QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFL 140
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M N G P+ +TYS ++ G C GR +A ++ +M E +PD T+ IL+ G
Sbjct: 141 SEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKE 200
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ A F M+EK + + + + L++G+ SQ +++ A KL M+ K P +
Sbjct: 201 GMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK-GCAPSVRS 259
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL- 572
+ LI+ + R++EA LL M + P + + F G +DA + L+ +
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Query: 573 SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
S P Y V + +G EA +LL Q+SKI
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELL-----KAMQESKI 358
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 141/326 (43%), Gaps = 41/326 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T+T+N ++ L++ + + V E M ++G E +++TY + + M++A KLF
Sbjct: 186 DTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ PSV+ ++L++
Sbjct: 246 NIMVRKGCAPSVRSYNILIK-------------------------------------GHC 268
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR DEA+ ++ M + PD +TYS ++ G C+ GR +DA +L+EM G +PD+
Sbjct: 269 KSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLM 328
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++I++ G C +D A M E + + + +LI G + ++ A +L +
Sbjct: 329 TYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNL 388
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
K ++P T+ +I LL EA L R M P + I F G
Sbjct: 389 FVK-GIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGD 447
Query: 562 VEDASEFLKALSVKEYPSSAAYLQVF 587
+A ++ + + + + ++ Q+
Sbjct: 448 TSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 40/310 (12%)
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P V ++L+ N+ F V LG + + + L+ + +A
Sbjct: 7 RPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDA 66
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC------------- 439
K+ M G+EPD ITYS +I GLCK G A +L +MEE GC
Sbjct: 67 VKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDS 126
Query: 440 ----------------------IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
P++ T++ ++ G C + A F +M+E+N D
Sbjct: 127 LCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPD 186
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
++L++G + + A + MIEK + P T+ L++ +++EA L
Sbjct: 187 TVTFNILVDGLSKEGMILEAQCVFETMIEK-GVEPNVNTYNALMDGYCSQSQMDEAQKLF 245
Query: 538 RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNE 593
+M ++ P + ++ K G +++A L +S K P + Y + + F +
Sbjct: 246 NIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQD 305
Query: 594 GRHYEAKDLL 603
GR +A+ LL
Sbjct: 306 GRPQDAQKLL 315
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 168/377 (44%), Gaps = 8/377 (2%)
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
+I +S++ VL VLK + P++AL +F + E H T T N +L L H+ V D
Sbjct: 84 EIRVSEDEVLGVLKSM-TDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMA 142
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V E M+K+ D+DTY+ I + + + M + + + L+ +
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
I + G V + S G S Y + AL K + ++K M++ G P
Sbjct: 203 --IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ T++ I L +AG+ ++A + M++ GC PD+ T+T+LI C A +++ A F
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
KM + D + L++ F ++ +K +E P TF L++ L
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLD-TFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL-SVKEYPSSAA 582
AR +EA +M+KQ P + I + G +EDA + L + SV P++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYT 439
Query: 583 YLQVFESFFNEGRHYEA 599
Y+ + F G +A
Sbjct: 440 YITFIDYFGKSGETGKA 456
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 100/465 (21%), Positives = 178/465 (38%), Gaps = 44/465 (9%)
Query: 87 EELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLK 146
E L P L S + V D E + D RP+ +++ +R L +
Sbjct: 221 EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKID 279
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTL 206
+ + RRM ++ C DL D + ++N +
Sbjct: 280 EAYEIFRRMDDEGC-------------------GPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 207 VDVVLGSDWDDKIGKKLEDMKIELSDNFV----LTVLKELRIYPVKALGFFRWVGEHSGY 262
V + D++ + I L D F L KE F E GY
Sbjct: 321 VKMKANGHKPDQV------IYITLLDKFNDFGDLDTFKE-----------FWSQMEADGY 363
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ +T+ ++ VL + + + + M+K+G ++ TY + + +EDA+K
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L + M +P+ + + + G K ++ G + + +
Sbjct: 424 LLDTMESVGVQPTAYTYITFIDYFGK--SGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L ++GR EA+ M ++ G PD++TY+ ++ K G+ ++A N+L EM NGC PD
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI A VD A F +M + + L++G + RV A +L
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
MI K + P +F TL++ +E A+ + M + P
Sbjct: 602 SMIXK-KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +YN ++ L W++ ++MK G D T+ + K + +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--VYDG 378
+L++ M+ KP ++++ S++ NN D L F Y+ + + + Y
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF----YDLVSSDFRPTPRTYGP 898
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K+GR +EA ++ + M + G +P+ ++ +I G K G E AC + M G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+K++TIL+ C A VD AL F ++ D D + +ING +R+ A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
L EM + + P T+ +L+ L A +E+A
Sbjct: 1019 ALYNEMRNR-GIVPDLYTYNSLMLNLGLAGMVEQA 1052
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + ITYN ++ LA+ ++ + ++ + TY + K +E+A++
Sbjct: 855 KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIH 380
LFE M D KP+ ++L+ I + + L R+ N+ G Y +
Sbjct: 915 LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE----GIRPDLKSYTILV 970
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L GR DEA +K+ G +PD I Y+++I GL K+ R E+A + +EM G +
Sbjct: 971 DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1030
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ L+ A V++A + ++ + D + LI G+ + AY +
Sbjct: 1031 PDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTV 1090
Query: 501 LVEMI 505
M+
Sbjct: 1091 YKNMM 1095
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
K K G P +Y+ +I L + E A ++ +M+ GC PD T+ +L+ H +
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
++ + +M+ + DA +++I+ ++ A +++ RP T
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRT 895
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE 576
+ LI+ L RLEEAM L M P F I+ +G + D
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD------------ 943
Query: 577 YPSSAAYLQVFESFFNEG 594
+ Q+F+ NEG
Sbjct: 944 ---TETACQLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G+ E ++ K M + +PD ITY+ VI L K+ + A + ++ + P +
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI G ++ A+ F +M + + + ++LING+ A +L M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
+ + +RP ++ L++ L A R++EA+ +K P + + I+ G +
Sbjct: 955 VNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 565 ASEFL 569
E L
Sbjct: 1014 MEEAL 1018
Score = 52.4 bits (124), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL FF + S ++ TY ++ LA+ + + + EEM G + + + +
Sbjct: 876 KALDFF-YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K E A +LF+ M++ +P ++ ++L+ + D L + N+ +S
Sbjct: 935 INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY--FNELKST 992
Query: 368 G------------NSLSKS-----------------------VYDGIHRALTKLGRFDEA 392
G N L KS Y+ + L G ++A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
++M + ++ AG EPD TY+ +I G + E A V M +GC P+I T+ L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 148/320 (46%), Gaps = 4/320 (1%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L ++ I+L+ + V V + + FF W + + TYN I++ L R + +
Sbjct: 123 LTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFI 182
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+++M +G + +T + F K R + A+++F + + K + ++L
Sbjct: 183 EFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVL 242
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
L+ + ++ +F A K G + Y+ I +K G+ E E+ +KAM
Sbjct: 243 LQCLCQRSHVGAANLFFNAMKG---GIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVAD 299
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF P+ +T+S +I GL +AGR +DA V MEE GC+P+ + LI + + D
Sbjct: 300 GFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDEC 359
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L + M+ N D + D LI FL ++V A ++L EM+ + + P + IE
Sbjct: 360 LKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMI-PTTGAITSFIE 418
Query: 523 KLLGARRLEEAMNLLRLMKK 542
L AM + + +K
Sbjct: 419 PLCQYGPPHAAMMIYKKARK 438
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 147/364 (40%), Gaps = 47/364 (12%)
Query: 223 LEDMKIE-LSDNF-VLTVLKELRIYP---VKALGFFRWVGEHSGYKHNTITYNGILRVLA 277
L+DM I+ +S N+ L+++ + I KA+ FR + E G K +T + N +L+ L
Sbjct: 189 LKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGG-KCDTESLNVLLQCLC 247
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+ V N+ K G + TY I + K+ + + + + M+ + P+
Sbjct: 248 QRSHV-GAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCL 306
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
S L+ + D + V + E G + VY+ + FDE K
Sbjct: 307 TFSHLIEGLGRAGRIDDAV--EVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYN 364
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M ++ +P+ TY+++I KA + DA +LDEM G IP T I+ C
Sbjct: 365 FMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQYG 424
Query: 458 EVDRALLCFAK-----------------------------------MMEKNYDADADLLD 482
A++ + K M E Y +D ++ +
Sbjct: 425 PPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEVYE 484
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK- 541
+ING + +++ A ++ E + K P + L KLL + ++E A L +K
Sbjct: 485 YVINGLCNIGQLDTAVLVMEESLXK-GFCPSRLIRSKLNNKLLASNKVEMAYKLFLKIKX 543
Query: 542 -KQN 544
+QN
Sbjct: 544 ARQN 547
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ I +AL + + ++K M G P+ T S V+ KA + A + +
Sbjct: 168 TYNVIIKALGRRKFIEFXVXVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNL 227
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
EE G D ++ +L+Q C + V A L F M+ + +++I G+ ++
Sbjct: 228 EEFGGKCDTESLNVLLQCLCQRSHVGAANL-FFNAMKGGIPFNCMTYNIIIGGWSKYGKI 286
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ L M+ P TF LIE L A R+++A+ + M++ P +
Sbjct: 287 GEMERCLKAMVAD-GFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNA 345
Query: 555 YISKFGTVEDASEFLK----ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
IS F + D E LK +S P+ Y ++ +F + +A ++L
Sbjct: 346 LISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEML 398
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 156/352 (44%), Gaps = 48/352 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N I+YN I+ L + + +V ++M++ G + D+ TY I K R++ DA
Sbjct: 188 GHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDA 247
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ M+D P+V Y+ +
Sbjct: 248 MEFLSEMLDRGIPPNV-------------------------------------FTYNCMV 270
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
LG+ +EA ++ K M PD +T + ++ GLCK G +A V + M E G
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ L+ G+C ++ A F M+ + ++LINGF +R++ A L
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
L EM K L P T+ TL++ L R +EA+N+ + M +Y P V Y
Sbjct: 391 LAEMYHKA-LNPDTVTYSTLMQGLCQFGRPKEALNIFKEM--CSYGLLPN-LVTYSILLD 446
Query: 556 -ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G +++A + LK++ K+ P+ + + E F G+ AK+L K
Sbjct: 447 GFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSK 498
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 157/364 (43%), Gaps = 34/364 (9%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G K + +TYN I+ L + V D + EM G ++ TY + F +
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANK---------YESL 367
+A +LF+ M+ P ++L+ + + LVF + Y +L
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339
Query: 368 --GNSL------SKSVYD---------GIH------RALTKLGRFDEAEKMMKAMKNAGF 404
G L +K V++ G+H K R DEA+ ++ M +
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD +TYS ++ GLC+ GR ++A N+ EM G +P++ T++IL+ G C +D AL
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M EK + + +LI G ++ A +L ++ +RP T+ +I+ L
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFAD-GIRPTIRTYTVMIKGL 518
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYL 584
L +EA +L R M+ + P + I F +D+S ++ + +A L
Sbjct: 519 LKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANL 578
Query: 585 QVFE 588
F+
Sbjct: 579 STFQ 582
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 124/278 (44%), Gaps = 7/278 (2%)
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+V ++L+ + +N+ D + + K LG + S ++ + L G+ EA +
Sbjct: 122 NVYSLNVLINCLCRLNHVDFAV--SILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVE 179
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ M G EP+ I+Y+ +I GLCK G A +V +ME+NGC PD+ T+ +I C
Sbjct: 180 LFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLC 239
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
V+ A+ ++M+++ + + +++GF ++N A +L EM+ + + P
Sbjct: 240 KDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGR-DVMPDT 298
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSV 574
T L++ L + EA + M ++ P + + + +E K +
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358
Query: 575 ----KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
P +Y + F R EAK LL + H
Sbjct: 359 MIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 123/288 (42%), Gaps = 7/288 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ F M+ +PSV + L S + V + N+ + G + +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAK--KKQYSTVVSLCNQMDLFGVTHNVYSL 126
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L +L D A ++ M G P T++ +I GLC G+ ++A + +EM
Sbjct: 127 NVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVR 186
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ ++ +I G C A+ F KM + D + +I+ + VN
Sbjct: 187 RGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVND 246
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP---FV 553
A + L EM+++ + P T+ ++ +L EA L + M ++ P V
Sbjct: 247 AMEFLSEMLDR-GIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
+ K G V +A + ++ K P+ + Y + + + + EAK
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAK 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 105/516 (20%), Positives = 212/516 (41%), Gaps = 69/516 (13%)
Query: 26 RPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI-FFSTSPNS-SLELILAC------- 76
RP F + SF Q T ++ C ++ F + N SL +++ C
Sbjct: 85 RPSVAEFGKF--LGSFAKKKQYSTV---VSLCNQMDLFGVTHNVYSLNVLINCLCRLNHV 139
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPE--KASAFFNWVCDKKQFRPSSTVYSL 134
D++ + K+ +L T + ++ L N+ + +A FN + ++ P+ Y+
Sbjct: 140 DFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV-RRGHEPNVISYNT 198
Query: 135 MLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFHD-G 192
++ L + ++M+++ C + TY +I+ L K + +D + L++ D G
Sbjct: 199 IINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRG 258
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-----KELRIYPV 247
+ + N ++ + ++ K++ + + D LT+L KE +
Sbjct: 259 IPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDV-MPDTVTLTILVDGLCKEGMVSEA 317
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ + F + E G + N TYN ++ + + V E M ++G + +Y +
Sbjct: 318 RLV--FETMTE-KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNIL 374
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
F K R M++A L M P S L++ + P L +F+ Y
Sbjct: 375 INGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGL 434
Query: 367 LGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI---------------- 409
L N ++ S+ DG K G DEA K++K+M+ EP+ +
Sbjct: 435 LPNLVTYSILLDG----FCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLE 490
Query: 410 -------------------TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
TY+ +I GL K G ++A ++ +ME++G +P+ ++ ++I
Sbjct: 491 VAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMI 550
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
QG + A+ +M+ K + A+ +L++
Sbjct: 551 QGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLLD 586
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L +H S+ + +N+ EM+ +G +I TY + F
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D KL M+ P+V S+L+ S
Sbjct: 413 DDGAKLLRDMIKRKINPNVVTFSVLIDS-------------------------------- 440
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
K G+ EAE++ K M + G PD ITY+ +I G CK + A ++D M
Sbjct: 441 -----FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 495
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++N A
Sbjct: 496 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 555
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + ++ P T+K L++ L E+A+ + ++K +
Sbjct: 556 KELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 614
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA+ L K
Sbjct: 615 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L F K LG + + + L GR EA +++ M G +PD IT +
Sbjct: 237 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 296
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ GLC +G+ +A ++D+M E GC P+ T+ ++ C + + A+ KM E+N
Sbjct: 297 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 356
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
DA ++I+G ++ A+ L EM E + T+ LI A R ++
Sbjct: 357 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDG 415
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
LLR M K+ P F I F G + +A E K + + P + Y + +
Sbjct: 416 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 475
Query: 590 FFNEGRHYEAK---DLLYK--CPHHIRQDSKISLLFGSAKSNKV 628
F E +A DL+ C +IR + L+ G K+N++
Sbjct: 476 FCKENHLDKANQMVDLMVSKGCDPNIRTFN--ILINGYCKANRI 517
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 122/296 (41%), Gaps = 40/296 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + +R+ + +EM G D TY + F K ++ A ++
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ P+++ ++L+ N D GL +FR K G Y+ + +
Sbjct: 490 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVTYNTLIQGF 546
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITY-------------------------------- 411
+LG+ + A+++ + M + P+ +TY
Sbjct: 547 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 606
Query: 412 ---SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ +I G+C A + +DA ++ + G P +KT+ I+I G C + A L F K
Sbjct: 607 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 666
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M E + D ++LI L + K L+E +++ +T K +I+ L
Sbjct: 667 MEEDGHAPDGWTYNILIRAHLGDGDATKSVK-LIEELKRCGFSVDASTIKMVIDML 721
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ D+A + + M ++ P I +S++ + K +++ + +ME G ++ T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I+I C ++ A K+++ Y+ + LING + RV+ A +L+ M+E
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE- 284
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVED 564
+ +P T TL+ L + + EAM L+ M + P P + + K G
Sbjct: 285 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 344
Query: 565 ASEFLKAL 572
A E L+ +
Sbjct: 345 AMELLRKM 352
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 118/528 (22%), Positives = 210/528 (39%), Gaps = 97/528 (18%)
Query: 103 RKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
RK+D KA F + DK + P Y ++ L + +K+ + + C+
Sbjct: 9 RKVD----KAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP 63
Query: 163 EEETYLSILGVLKKAKKASDLAAL-----------------NQFHDGMVKEIAMDNVAK- 204
TY +++ L K + + L + DG+ ++ +D K
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 205 -----------------TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT-------VLK 240
TLV+ +LG + LE M ++T + K
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 241 ELRIYPVKALGFFRWVGE----HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
E I FR V E SG + IT+N +L L + + + D NV + + G
Sbjct: 184 EGEIEAA-----FRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERG 238
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLG 355
++ TY + K M++A++L M++ + + S ++ + + D
Sbjct: 239 CRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAV 298
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+V R L ++++ Y+ + K R EA +++ M AGF P +TY+ +
Sbjct: 299 VVLRQMRDAGCLPDAVT---YNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL------------ 463
GLC++GRF++A +LD M GC P+ T++ ++ G C A V AL
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVV 415
Query: 464 -------------LCFAKMMEKNYD-----------ADADLLDVLINGFLSQKRVNGAYK 499
LC A +++ Y+ D +LING R++ +
Sbjct: 416 APHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLE 475
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L M E+ + P T+ TL+++L A R++EA +L + M+ P
Sbjct: 476 LFRGMAERGCV-PDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 129/274 (47%), Gaps = 4/274 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + NT+TY+ ++ L + + D V+ +M+ G D TY + F K + + +A
Sbjct: 273 GCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L M++ + PSV + L + D + + + + G + + Y I
Sbjct: 333 VGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAV--EILDYMAARGCAPNAITYSSIV 390
Query: 381 RALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K GR EA + M ++ P I YS +I GLCKAG+ ++A L+ M G
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IPD+ T++ILI G C A +D L F M E+ D L++ RV+ A+
Sbjct: 451 IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
L +M L P ++T +T+I LL R E+A
Sbjct: 511 LFQQM-RSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 160/364 (43%), Gaps = 10/364 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL + + H G++ +TY+ ++ L R V ++EEM G + TY +
Sbjct: 84 ALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLV 143
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
++A L E M P + L+++ + ++ FRV ++ +
Sbjct: 144 NALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLC--KEGEIEAAFRVVDEMFMIE 201
Query: 369 NSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ LS V ++ + L K R +A + K G P+ +TYS +I GL K + ++
Sbjct: 202 SGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDE 261
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L +M E GC + T++ ++ G ++ A++ +M + DA + LI+
Sbjct: 262 ALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLID 321
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF ++R+ A LL EM+E P T+ TL L + R +EA+ +L M +
Sbjct: 322 GFFKRQRLREAVGLLREMLE-AGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCA 380
Query: 547 PFP---EPFVQYISKFGTVEDASEFLKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKD 601
P V + K G V +A + + ++ E P AY + + G+ EA +
Sbjct: 381 PNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYE 440
Query: 602 LLYK 605
L +
Sbjct: 441 FLER 444
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 165/364 (45%), Gaps = 48/364 (13%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ F+ + + + Y + +TY ++ L + V++ +++ EE + +G + TY +
Sbjct: 13 KAITLFKQMVDKAIYP-DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71
Query: 308 SRQFQKFRMMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
K +E+A+ L++ M + ++P+V S L+
Sbjct: 72 IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLI----------------------- 108
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
DG+ R D+ K+++ M G P+ +TY+ ++ L GR ++
Sbjct: 109 ----------DGLCRD----HEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKE 154
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK--MMEKNYDADADLLDVL 484
A ++L++M NGC P++ T+ ++I+G C E++ A + M+E D + +
Sbjct: 155 AFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSV 214
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL----RLM 540
++G ++R+ A+ + +E+ RP T+ TLI+ L +++EA+ LL L
Sbjct: 215 LDGLCKEQRILDAHNVFKRALER-GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELG 273
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ N + V + K G +EDA L+ + P + Y + + FF R EA
Sbjct: 274 CRANTVTY-STVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREA 332
Query: 600 KDLL 603
LL
Sbjct: 333 VGLL 336
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 133/323 (41%), Gaps = 20/323 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
++ RP+ YS ++ L + + L +M E C TY +++ G+LK +
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295
Query: 181 SDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
+ L Q D G + + N TL+D G ++ + + ++ L F +V+
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYN---TLID---GFFKRQRLREAVGLLREMLEAGFHPSVV 349
Query: 240 KELRI-YPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ + + G F E G N ITY+ I+ L + V + E+M
Sbjct: 350 TYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM 409
Query: 293 KK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+ E + Y + K +++A + E M+ P V S+L+ +
Sbjct: 410 ARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGR 469
Query: 352 PDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D GL +FR + + + ++ Y + L + R DEA + + M++ G PD T
Sbjct: 470 IDTGLELFRGMAERGCVPDMVT---YATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRST 526
Query: 411 YSQVIFGLCKAGRFEDACNVLDE 433
+I GL + R EDA + DE
Sbjct: 527 RRTMIHGLLEVNRDEDAKRIQDE 549
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 88/234 (37%), Gaps = 43/234 (18%)
Query: 414 VIFGLCKAG-----------------------------------RFEDACNVLDEMEENG 438
+I GLCK+ R ++A ++ +E G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKM-MEKNYDADADLLDVLINGFLSQKRVNGA 497
C P + T+ +I G C ++ AL + M + + LI+G V+
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
KLL EM + P T+ TL+ LLG R +EA +LL M PP F ++
Sbjct: 121 CKLLEEMAGR-GCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179
Query: 555 YISKFGTVEDASEFLKALSVKE---YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G +E A + + + E P + V + E R +A ++ +
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 233
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 105/471 (22%), Positives = 192/471 (40%), Gaps = 37/471 (7%)
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD 191
+S+++ LV L Q + + C I+ TY +I+ L K KK + AL
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVAL----- 56
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG 251
+++I + T+ + K+G+ LE+ A+
Sbjct: 57 --MEKITANGCTPTIATYNALLNGLCKMGR-LEE-----------------------AID 90
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
R + ++ G + +TY ++ L + + + + + +EM G +D Y + R
Sbjct: 91 LLRKIVDN-GCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGL 149
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ + A +++ M P V S ++ + +G R+ E+ G +
Sbjct: 150 LQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR--IGAAVRIFKSMEARGLAP 207
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ VY + L K + D A +M+ MK A PD ITY+ +I GLCK+G A
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
DEM E GC PD+ T+ ILI G C A D A F M + LI+G +
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP--PFP 549
+++ A L + +++ P + +L++ L + +LE L M++
Sbjct: 328 RQLTKA-SLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTR 386
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ ++ K V++A A+ + P AY + + G+ E +
Sbjct: 387 TRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYAYNSIISALIKSGKVNEGQ 437
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 161/436 (36%), Gaps = 77/436 (17%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T++ ++ L + + ++ +E G +DI TY I K + +++AV L E +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 328 MDGPYKPSVQDCSLLLRSISSIN-----------------NPDL--------GL------ 356
P++ + LL + + PD+ GL
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 357 --VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+++ + S G +L Y + R L + G+ +A + K M + G PD +T S +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 415 IFGLCKAGRFEDACNVLDEMEENG-----------------------------------C 439
I GLCKAGR A + ME G C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ ILI G C + +V A F +M+E D ++LI+GF + A
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
+ +M R P T+ TLI L R+L +A + MK++ PP V +
Sbjct: 301 VFDDM-SSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC-----PHHIR 611
K G +E + +S ++ R EA L PH
Sbjct: 360 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA 419
Query: 612 QDSKISLLFGSAKSNK 627
+S IS L S K N+
Sbjct: 420 YNSIISALIKSGKVNE 435
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 143/302 (47%), Gaps = 4/302 (1%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L ++ I+L+ + V V+ + + FF W + + TYN I++ L R + +
Sbjct: 82 LTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFI 141
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+++M +G + +T + F K R + A+++F + + K + ++L
Sbjct: 142 EFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGGKCDTESLNVL 201
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
L+ + ++ +F A K G + Y+ I +K G+ E E+ +KAM
Sbjct: 202 LQCLCQRSHVGAANLFFNAMKG---GIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVAD 258
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF P+ +T+S +I GL +AGR +DA V MEE GC+P+ + LI + + D
Sbjct: 259 GFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDEC 318
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L + M+ N D + D LI FL ++V A ++L EM+ + + P + IE
Sbjct: 319 LKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMI-PTTGAITSFIE 377
Query: 523 KL 524
L
Sbjct: 378 PL 379
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 148/366 (40%), Gaps = 47/366 (12%)
Query: 221 KKLEDMKIE-LSDNF-VLTVLKELRIYP---VKALGFFRWVGEHSGYKHNTITYNGILRV 275
K L+DM I+ +S N+ L+++ + I KA+ FR + E G K +T + N +L+
Sbjct: 146 KVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLEEFGG-KCDTESLNVLLQC 204
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + V N+ K G + TY I + K+ + + + + M+ + P+
Sbjct: 205 LCQRSHV-GAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPN 263
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
S L+ + D + V + E G + VY+ + FDE K
Sbjct: 264 CLTFSHLIEGLGRAGRIDDAV--EVFHHMEETGCVPNACVYNALISNFISTRDFDECLKY 321
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M ++ +P+ TY+++I KA + DA +LDEM G IP T I+ C
Sbjct: 322 YNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEMVGRGMIPTTGAITSFIEPLCQ 381
Query: 456 ANEVDRALLCFAK-----------------------------------MMEKNYDADADL 480
A++ + K M E Y +D ++
Sbjct: 382 YGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKCGMLLNLWDEMQESGYSSDTEV 441
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ +ING + +++ A ++ E + K P + L KLL + ++E A L +
Sbjct: 442 YEYVINGLCNIGQLDTAVLVMEESLHK-GFCPSRLIRSKLNNKLLASNKVEMAYKLFLKI 500
Query: 541 K--KQN 544
K +QN
Sbjct: 501 KIARQN 506
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 6/232 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ I +AL + + K++K M G P+ T S V+ KA + A + +E
Sbjct: 128 YNVIIKALGRRKFIEFVVKVLKDMHIQGISPNYETLSIVMDSFIKARQVSKAIEMFRNLE 187
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E G D ++ +L+Q C + V A L F M+ + +++I G+ ++
Sbjct: 188 EFGGKCDTESLNVLLQCLCQRSHVGAANL-FFNAMKGGIPFNCMTYNIIIGGWSKYGKIG 246
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
+ L M+ P TF LIE L A R+++A+ + M++ P +
Sbjct: 247 EMERCLKAMVAD-GFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNAL 305
Query: 556 ISKFGTVEDASEFLK----ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
IS F + D E LK +S P+ Y ++ +F + +A ++L
Sbjct: 306 ISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEML 357
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 10/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T+N ++ + + + + +++ M +G+ D+ TY + ++DA
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDA 309
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L E M+ KP+V + L+ + + V + S G S Y+ +
Sbjct: 310 RHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR--IKEAREVLDAMVSSGQSPDVVTYNTLV 367
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G+ + A +++ M G P+ +TY+ ++ GLCKA R +AC V +M+ +GC
Sbjct: 368 HGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCA 427
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T LI G C+A +VD L F +M+ D + L R A ++
Sbjct: 428 PNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEI 487
Query: 501 LVEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE---PFVQYI 556
L E E +R W ++ ++ LL A ++E A+ +R M + P PE V +
Sbjct: 488 LREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGL 547
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE--GRHYEAKD 601
K G +A L+ + Y A F E G+ YE +D
Sbjct: 548 CKSGQGGEARAVLEEIMDLAYGGKARGKAA--KFVEEMVGKGYEIED 592
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 159/349 (45%), Gaps = 7/349 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
HSG +T+ Y ++ L S D + +M + G TY + K M+E
Sbjct: 38 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 97
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A L + M++ + P V + ++ + + + L+ N+ E LG + ++ ++
Sbjct: 98 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLL--FNEMERLGCTPNRRSHNT 155
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L + + D+A ++ M+ PD+ +Y +I GL KAG+ +A + M ++G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P T+ ++I G C A +D AL F M K ++LI+ + +++ A+
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
+LL M + + P T+ TLI L R+++A +LL M K+ P +
Sbjct: 276 RLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHG 334
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G +++A E L A+ S + P Y + G+ A++LL
Sbjct: 335 LCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELL 383
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 152/361 (42%), Gaps = 7/361 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N ++N I+ L + + V EM+ + D +Y + K +
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A KLF+ M+D PS ++++ + D L + S G S+ ++
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL--ELFKSMRSKGCRPSRFTFN 259
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ A K G+ DEA +++K M + G PD +TYS +I GLC R +DA ++L++M +
Sbjct: 260 ILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKR 319
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C P + T LI G C A + A M+ D + L++G + A
Sbjct: 320 QCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERA 379
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL +M+ + L P T+ L+ L A RL EA + MK P + I
Sbjct: 380 RELLSDMVAR-GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALIL 438
Query: 558 KF---GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
F G V+ + F + + P Y + GR A ++L + +R +
Sbjct: 439 GFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSE 498
Query: 614 S 614
+
Sbjct: 499 A 499
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 18/323 (5%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSV 375
+ DA LF+ ++ PS + L+ + N+ D +F N+ G S
Sbjct: 26 LNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRR---GCPPSPVT 82
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + A K G +EA ++K M G PD +TY+ V+ GLCK+ R E+A + +EME
Sbjct: 83 YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME 142
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC P+ ++ +I G C +++D+A F +M K+ D+ +LI+G ++N
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLN 202
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
AYKL M++ + P T+ +I + A L+EA+ L + M+ + P F
Sbjct: 203 EAYKLFQRMLDS-GITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL-----YKC 606
+ K G +++A LK ++ + P Y + + R +A+ LL +C
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321
Query: 607 -PHHIRQDSKISLLFGSAKSNKV 628
P + Q+ +L+ G K+ ++
Sbjct: 322 KPTVVTQN---TLIHGLCKAGRI 341
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K G+ ++A + + + ++G P + Y+ +I GLC A F+DA + +M GC P
Sbjct: 19 GLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP 78
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
T+ ++I C ++ A KM+E + D + +++G RV A L
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 138
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
EM E++ P + + T+I L ++++A + M+ ++ PP + + ++K
Sbjct: 139 NEM-ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAK 197
Query: 559 FGTVEDASE-FLKALSVKEYPSSAAY 583
G + +A + F + L PS+ Y
Sbjct: 198 AGKLNEAYKLFQRMLDSGITPSAVTY 223
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M PD+ +Y +I GL KAG+ DA N+ ++ +G P +T LI G C AN
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
D A FA M + +V+I+ + + A L+ +MIE + P T+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVK 575
T+++ L + R+EEA+ L M++ P + + + ++ A + + K
Sbjct: 120 TVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAK 179
Query: 576 EY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ P S +Y + + G+ EA L +
Sbjct: 180 DIPPDSWSYGILIDGLAKAGKLNEAYKLFQR 210
>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
Length = 385
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 139/285 (48%), Gaps = 8/285 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TYN ++ L + E + ++++EEM G DI TY + F K + +DA+++F
Sbjct: 53 TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVF 112
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
E ++ ++P V S L+ + + L R+ + N+++ Y+ +
Sbjct: 113 EQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT---YNSLISG 169
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
++G+ DEA +++ M G PD +TY+ ++ G CK R +DA ++L++M G P+
Sbjct: 170 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPN 229
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+T L+ G C N + A+ +M K+ + +++G+ ++ A K
Sbjct: 230 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF-- 287
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M+E++ P +F +I L R EAM L+ +++ P
Sbjct: 288 -MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNP 331
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 112/230 (48%), Gaps = 6/230 (2%)
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G HR L R+ A+++A P +TY+ +I GLCKA R +A ++L+EM +
Sbjct: 26 GSHR--RALQRWPGRRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVYS 83
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GCIPDI T+T LI G C + + D AL F +++ + + D LI+G + R+ A
Sbjct: 84 GCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEA 143
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
L MI+ P T+ +LI +++EAMNLL M + P + ++
Sbjct: 144 IDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMN 203
Query: 558 KF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
F ++DA + L ++ K P+ + + + E R +A +L
Sbjct: 204 GFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 145/353 (41%), Gaps = 49/353 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P++ Y+ ++ L + + + L M C + TY +++ K+KK+ D AL
Sbjct: 52 PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDD--AL 109
Query: 187 NQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
F + + D V L+D + KE R+
Sbjct: 110 RVFEQLVARGFRPDVVTYSCLID----------------------------GLCKEGRLK 141
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
+A+ F + + NT+TYN ++ R + + N++E M + G D+ TY
Sbjct: 142 --EAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYT 199
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ F K ++DA L M P+V + L+ + N R+++
Sbjct: 200 TLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCREN--------RLSDAVH 251
Query: 366 SLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
LG KS Y+ I ++ + +EA K M ++ P+ ++++ +I GLC
Sbjct: 252 ILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPPNVVSFNIMIRGLC 309
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
K R +A +++E C PD+ +T +I C +VD A + KM+E+
Sbjct: 310 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEE 362
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 10/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G++ N +TY +L+V+ + ++ +M++ ++D Y I K ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYD 377
+A LF M +K + + L+R D G + R K + + ++ +
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA---FS 321
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EAE++ K M G PD +TY+ +I G CK + + A ++LD M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++ A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + R+RP ++K L++ L E+A+ + ++K +
Sbjct: 442 KELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA DLL++
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFR 551
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 163/349 (46%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G HN T + ++ R + ++ + ++ K GYE D T+ + +
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A++L + M++ +KP++ + L+ + +N V + E+ G ++ Y
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVET-GFQPNEVTYG 216
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + K G+ A ++++ M+ + D + YS +I GLCK G ++A N+ +EME
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G DI +T LI+G C A D M+++ D LI+ F+ + ++ A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L EMI++ + P T+ +LI+ +L++A ++L LM + P F +
Sbjct: 337 EELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 555 YISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDL 602
K ++D E + +S++ + + Y + + F G+ AK+L
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 34/323 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L + S+ + +N+ EM+ +G++ DI Y + R F
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 318 EDAVKLFEFMMDGPYKPSVQ------DC---------------SLLLRSIS--SINNPDL 354
+D KL M+ P V DC ++ R IS ++ L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 355 GLVFRVANKYESLGNSLSKSVYDG----------IHRALTKLGRFDEAEKMMKAMKNAGF 404
F N+ + + L V G + K D+ ++ + M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D +TY+ +I G C+ G+ E A + EM PDI ++ IL+ G C E ++AL
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F K+ + + D + +++I+G + +V+ A+ L + K ++P T+ +I L
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGL 537
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
L EA L R M++ + P
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSP 560
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DAV LF+ M +P + D S L ++ D LV + + E G + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + A M + G+EPD +T+S +I GLC GR +A ++D M E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T L+ G C +V A+L +M+E + + +V L +G
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN----EVTYGPVLKVMCKSGQ 227
Query: 498 YKLLVEMIEKVRLRPWQ---ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
L +E++ K+ R + + +I+ L L+ A NL M+ + + +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 555 YISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
I F G +D ++ L+ + K P A+ + + F EG+ EA++L
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 175/451 (38%), Gaps = 76/451 (16%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y +L+ + LR+M+E ++ Y I+ L K S
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL--CKDGSLDN 265
Query: 185 ALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F++ +K D + T + WDD K L DM +
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG-AKLLRDMI-------------KR 311
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+I P + + ++ ++ + +R+ + +EM + G D
Sbjct: 312 KITP------------------DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVA 361
TY + F K ++ A + + M+ P+++ ++L+ N D GL +FR
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR-- 411
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K G Y+ + + +LG+ + A+++ + M + PD ++Y ++ GLC
Sbjct: 412 -KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 422 GRFEDACNVLDEMEEN-----------------------------------GCIPDIKTW 446
G E A + +++E++ G PD+KT+
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
I+I G C + A L F KM E + + ++LI L + + K L+E I+
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIK 589
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ +T K +++ L R + +++L
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 158/346 (45%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T ++ +++ L + + ++ ++M EG++ D+ Y + K A
Sbjct: 139 GCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAA 198
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V L+ S+ + F + ++ + G S + + +
Sbjct: 199 IRLLRSMEKGNCQPDVVVYGTLIHSLCK--DRQQTQAFNLFSEMITKGISPNIVTCNSLV 256
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL LG + ++ M ++ P+ I+ + V+ LCK G A +V+D M ++G
Sbjct: 257 YALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVE 316
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI GHC +E+D A+ F M+ K + + LING+ +R++ A L
Sbjct: 317 PDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYL 376
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM + +L P T+ TLI L RL++A+ L R M P + + Y+
Sbjct: 377 FEEMCRQ-KLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLC 435
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K ++ A LKA+ P Y V + G +A+DL
Sbjct: 436 KNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDL 481
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/395 (22%), Positives = 171/395 (43%), Gaps = 23/395 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P +Y+ ++ L LR M++ +C + Y +++ L K ++ +
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQ-- 232
Query: 185 ALNQFHDGMVKEIAMDNV-AKTLVDVVLG-SDWD--DKIGKKLEDMKIELSDNFVLTVLK 240
A N F + + K I+ + V +LV + +W + + ++ D KI + + TV+
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292
Query: 241 EL-------RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
L + + V + F SG + + +TY ++ + + V + M
Sbjct: 293 ALCKEGMVAQAHDVVDMMF------QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMV 346
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-P 352
+G ++ +Y + + K M+ A+ LFE M P+ + L+ + +
Sbjct: 347 HKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQ 406
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D +FR + + G Y + L K D+A ++KA++ + +PD Y+
Sbjct: 407 DAIALFR---EMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYT 463
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
VI G+C+AG EDA ++ + G P++ T+ I+ G C +D A F +M E
Sbjct: 464 IVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDEN 523
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
AD + + GFL + A +LL EM+ +
Sbjct: 524 ACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR 558
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
++ F ++DA+ F M+ PS+ D + +L SI+ + V ++ K +S G
Sbjct: 48 KYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKR--YSTVLSLSRKMDSFGI 105
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ + + + L R + A ++ + G +PD +++ +I GLC G+ +A +
Sbjct: 106 PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALH 165
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ D+M G PD+ + LI G C A+ M + N D + LI+
Sbjct: 166 LFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLC 225
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ A+ L EMI K + P T +L+ L + LL M P
Sbjct: 226 KDRQQTQAFNLFSEMITK-GISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMP 282
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 129/322 (40%), Gaps = 26/322 (8%)
Query: 274 RVLARHE--SVRDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
R+L H S+ DF ++ + K + Y T + +SR+ F + + L
Sbjct: 64 RMLHMHPPPSIVDFAKILTSITKVKRYS----TVLSLSRKMDSFGIPHNVYTL------- 112
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
++L+ S +N + F V K LG + + + + L G+
Sbjct: 113 ---------NVLINSFCHLNR--VNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIG 161
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA + M GF+PD + Y+ +I GLCK G A +L ME+ C PD+ + LI
Sbjct: 162 EALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLI 221
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
C + +A F++M+ K + + L+ + LL EM++ ++
Sbjct: 222 HSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDS-KI 280
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
P + T+++ L + +A +++ +M + P + I + E +K
Sbjct: 281 MPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVK 340
Query: 571 ALSVKEYPSSAAYLQVFESFFN 592
+ + A + + + N
Sbjct: 341 VFDMMVHKGCAPNVFSYNTLIN 362
>gi|255660944|gb|ACU25641.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 481
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 165/363 (45%), Gaps = 43/363 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + + HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFXHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKAGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E +
Sbjct: 111 VXRTIKSYDALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETSN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+M PD+ T+ +I G+ B+++ F +M +N + LI G+
Sbjct: 171 RFFXDMXSREITPDVVTYNTMINGYYRVBKMEEXEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
S RV+ A L EM + ++P T+ TL+ L A ++ EA ++L+ ++ K P
Sbjct: 231 XSVDRVDBALXLXEEM-KXFGIKPNAITYSTLLPGLCDAEKMSEARSILKEMVXKYXAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ JKA+ P+ A + V E + G++ +A LL
Sbjct: 290 DNSIFMRLISGQCKVGDLDAAADVJKAMIRLSIPTEAGHYGVLIEXYCKAGQYDKAVKLL 349
Query: 604 YKC 606
K
Sbjct: 350 DKV 352
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 158/365 (43%), Gaps = 39/365 (10%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR G +TYN I+ L + + + EE+ + G+ D+ TY +
Sbjct: 198 RALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTL 257
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANK-Y 364
K +E+A +L M P+V S+L+ + + D L+ + K
Sbjct: 258 IDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSC 317
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAG 422
+ L N ++ Y+ L K EA ++M+++++ PD +T+S +I GLCK G
Sbjct: 318 DVLPNIIT---YNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 374
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ ++AC+V D+M G +P++ T+ L+ G C A++++RA M++K D
Sbjct: 375 QIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYS 434
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
VL++ F RV+ A +LL M + P TF ++I+ L + R EA +
Sbjct: 435 VLVDAFCKASRVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDRSGEAFQM------ 487
Query: 543 QNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
F K G V P Y + + F GR +A+ L
Sbjct: 488 ---------FDDMALKHGLV---------------PDKITYCTLIDGLFRTGRAGQAEAL 523
Query: 603 LYKCP 607
L P
Sbjct: 524 LDAMP 528
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 123/546 (22%), Positives = 225/546 (41%), Gaps = 64/546 (11%)
Query: 75 ACDWSDELENKLEELSP-KLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYS 133
AC+ L + +SP +T +++ L K E S F + + + P+ Y+
Sbjct: 342 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI--AGGYVPNVITYN 399
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM 193
++ L D +++ + M + + TY ++ KA + + AL H GM
Sbjct: 400 ALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDE--ALELLH-GM 456
Query: 194 VKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMKIE---LSDNFVLTVLKELRIYPVK 248
NV +++D + SD + + +DM ++ + D L +
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLID------- 509
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
G FR +G +L + ++ F + + K G D+ +++
Sbjct: 510 --GLFR-----TGRAGQA---EALLDAMPDPDTYA-FNCCINGLSKLG---DVSRALQVY 555
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSIN-NPDLGLVFRVANKYES 366
+ + ++ D V F ++ G K + S L + + N PD+ + F
Sbjct: 556 NRMLELELVPDKVT-FNILIAGACKAGNFEQASALFEEMVAKNLQPDV-MTF-------- 605
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
++ DG L K G+ + A ++ M N G P+ +TY+ ++ GLCK+GR E+
Sbjct: 606 ------GALIDG----LCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
AC L+EM +GC+PD T+ L+ C A+ D AL +++ +D D ++L++
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + A +L EM+ K P T+ TLI+ L A LEEA L M +
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSR 774
Query: 547 PFPEPFVQY------ISKFGTVEDASEFLKAL---SVKEYPSSAAYLQVFESFFNEGRHY 597
V Y + K G +++A E ++ + S P+ Y + +
Sbjct: 775 CCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMA 834
Query: 598 EAKDLL 603
EA +L+
Sbjct: 835 EACELM 840
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 133/286 (46%), Gaps = 16/286 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T+TYN ++ L + V+EEM +G+ D+ TY + K +E+A
Sbjct: 702 GWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEA 761
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+L G V C + S+ L V R+ E + + KS
Sbjct: 762 RRLH-----GDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPN 816
Query: 376 ---YDGIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAGRFEDACNV 430
Y+ L K EA ++M+++++ PD +T+S +I GLCK G+ ++ACNV
Sbjct: 817 IITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
D+M G +P++ T+ +L+ G C ++++RA M++K D VL++ F
Sbjct: 877 FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 936
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
V+ A +LL M + P TF ++I+ L + + EA +
Sbjct: 937 ASHVDEALELLHGMASR-GCTPNVVTFNSIIDGLCKSDQSGEAFQM 981
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 153/362 (42%), Gaps = 13/362 (3%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ W G+KH ++N L +L + S ++ + TY + R
Sbjct: 97 FYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRA- 155
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGL-VFRVANKYESLGN 369
++ D + F V D +++L+S+ L +FR + +
Sbjct: 156 -TYKAGGDVERTLGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAP 214
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
++ Y+ I L K ++ + + G PD +TY+ +I LCKAG E+A
Sbjct: 215 TIV--TYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARR 272
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLING 487
+ +M C+P++ T+++LI G C +D A +M K+ D +++ + ++G
Sbjct: 273 LHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDG 332
Query: 488 FLSQKRVNGAYKLLVEMIE-KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
Q A +L+ + + +R+ P TF TLI+ L +++EA ++ M Y
Sbjct: 333 LCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYV 392
Query: 547 P---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P V + K +E A ++++ K P Y + ++F R EA +L
Sbjct: 393 PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALEL 452
Query: 603 LY 604
L+
Sbjct: 453 LH 454
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 140/338 (41%), Gaps = 45/338 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMMEDAVK 322
N +TY+ ++ L + + + +++EM ++ ++ +I TY K MM +A +
Sbjct: 779 NVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACE 838
Query: 323 LFEFMMDGPYK--PSVQDCSLLLRSISSINNPDLGLVFRVANKYESL--GNSLSKSV-YD 377
L + DG + P S L+ + D N ++ + G + V Y+
Sbjct: 839 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTD-----EACNVFDDMIAGGYVPNVVTYN 893
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K + + A M+++M + G PD ITYS ++ CKA ++A +L M
Sbjct: 894 VLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASR 953
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD-----ADLLDVLI-NGFLSQ 491
GC P++ T+ +I G C +++ A F M K+ A L+D L G+ Q
Sbjct: 954 GCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQ 1013
Query: 492 KRV-----------------NGAYKL------LVEMIEKVRLRPWQATFKTLIEKLLGAR 528
V NG KL L M+E + L P + TF LI A
Sbjct: 1014 AEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLE-LELVPDKVTFNILIAGACKAG 1072
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVE 563
E+A L M +N P F + + K G VE
Sbjct: 1073 NFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 153/381 (40%), Gaps = 48/381 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE--TYLSIL-GVLKKAKKASDL 183
P+ YS+++ L + + ++ M C + TY S L G+ K++ A
Sbjct: 778 PNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEAC 837
Query: 184 AALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+ DG ++ ++ D V TL+D + D+ +DM
Sbjct: 838 ELMRSLRDGSLR-VSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI--------------- 881
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
GY N +TYN ++ L + + + ++E M +G D+
Sbjct: 882 ----------------AGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY + F K +++A++L M P+V + ++ + + G F++ +
Sbjct: 926 TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQS--GEAFQMFD 983
Query: 363 KYESLGNSLS--KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+L + L+ K Y + L + G +AE ++ AM +PD ++ I GL K
Sbjct: 984 DM-TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMP----DPDTYAFNCCINGLSK 1038
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G D L M E +PD T+ ILI G C A ++A F +M+ KN D
Sbjct: 1039 LG---DVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMT 1095
Query: 481 LDVLINGFLSQKRVNGAYKLL 501
LI+G +V + ++
Sbjct: 1096 FGALIDGLCKAGQVEATWDIM 1116
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 178/398 (44%), Gaps = 15/398 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + +++ V V+K VK + FFRW Y+H+T TY ++R
Sbjct: 69 WGPDAEKALEVLMMKVDHWLVREVMKTDVGVSVK-MQFFRWAARKRNYEHDTSTYMALIR 127
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS---RQFQKFRMMEDAVKLFEFMMDGP 331
L E + W +++EM + + + T +++S R +M+ AV +F +
Sbjct: 128 CLEVVEQYGEMWKMIQEMVRN--PVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARK 185
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD 390
+P+ + ++ I ++ + V + N+ + G +V Y + A KLGR D
Sbjct: 186 CQPTAHAYNSMI--IMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQD 243
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A ++ MK+ G +P Y+ ++ L K A + +EM C PD+ T+T LI
Sbjct: 244 SAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTYTELI 303
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
+G A +D A F +M + D L++ +IN R++ A KL EM E +R
Sbjct: 304 RGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEM-ETLRC 362
Query: 511 RPWQATFKTLIEKLLGAR-RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDAS 566
P T+ T+I+ L ++ R+ E + MK P P + I F E A
Sbjct: 363 IPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAM 422
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
L+ + K + P AAY + ++ R+ A +L
Sbjct: 423 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELF 460
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 125/564 (22%), Positives = 218/564 (38%), Gaps = 99/564 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V V+ K D FF W K+ + ++ Y ++R
Sbjct: 69 WGPDAEKALEVLMMKVDHWLVREVM-KTDVGVSVKMQFFRWAARKRNYEHDTSTYMALIR 127
Query: 138 NLVNKDSLKQFWVTLRRM-KEDHCYIEEETYLSILGVLKKAKKASDLAA----------- 185
L + + W ++ M + C + I+ +L AK S A
Sbjct: 128 CLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKARKCQ 187
Query: 186 ----------LNQFHDGMVKEI-----AMDNVAKTLVDVVLGSDWDD---KIGKKLEDMK 227
+ H+G +++ M N + D V S K+G+ +D
Sbjct: 188 PTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGR--QDSA 245
Query: 228 I----ELSDNFVLTVLKELRIYPV------------KALGFFRWVGEHSGYKHNTITYNG 271
I E+ DN + K IY + ALG F + H + + TY
Sbjct: 246 IWLLNEMKDNGMQPTAK---IYTMLMALLFKLDNVHGALGLFEEM-RHQYCRPDVFTYTE 301
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++R L + + + +N EM++EG D + K ++DA+KLFE M
Sbjct: 302 LIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMETLR 361
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKS--VYDGIHRALTKLGR 388
PSV + +++++ + V +++ +E + G+ +S S Y + K R
Sbjct: 362 CIPSVVTYNTIIKALFESKSR----VSEISSWFERMKGSGISPSPFTYSILIDGFCKTNR 417
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGL-------------------C---------- 419
++A +++ M GF P Y +I L C
Sbjct: 418 TEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAV 477
Query: 420 ------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
KAGR +DA ++ DEM GC P++ + L+ G A +D AL +M +
Sbjct: 478 MIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHG 537
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D + ++++N + A +L M ++ ++P ++ T++ L A EEA
Sbjct: 538 CIPDINSYNIILNALAKTGGPDRAMGMLCNM-KQSAIKPDAVSYNTVLGALSHAGMFEEA 596
Query: 534 MNLLRLMKKQNYPPFPEPFVQYIS 557
+LMK+ N F + Y S
Sbjct: 597 ---AKLMKEMNAIGFDYDLITYSS 617
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 152/342 (44%), Gaps = 13/342 (3%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ VRD KK + DT K+ K R ++ ++
Sbjct: 69 FSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYKEIL 128
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSV--YDGIHRALTK 385
+ Y PS+ ++L+ L +VF K+ SL SV ++ + +
Sbjct: 129 ECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKW-----SLRPSVVSFNTLMNGYIR 183
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
LG DE ++ AM G +PD TYS +I GLCK + ++A +L+EM +NG +P+ T
Sbjct: 184 LGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVT 243
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T LI GHC +VD A+ + +M+ + + D + LI G + + A L+ EMI
Sbjct: 244 FTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMI 303
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTV 562
K L+P + T+ TLI+ LE L + M ++N + IS G
Sbjct: 304 MK-GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRA 362
Query: 563 EDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
DA + L+ L+V P + Y + F G A LL
Sbjct: 363 GDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLL 404
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++ V + ++M +G+ D+ TY + + +
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L E M+ KP + L+ S DL + F + + L + Y +
Sbjct: 295 ARDLVEEMIMKGLKPDKITYTTLIDG--SCKEGDLEITFELRKRMIRENIRLDEVTYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M G +PDN TY+ ++ CK G + A +L EM+ NG
Sbjct: 353 ISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQRNGP 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPGVVT 418
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 97/242 (40%), Gaps = 2/242 (0%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ R + + + + M G + D+ TY + K M++A +
Sbjct: 168 RPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M+D P+ + L+ N + L + + S G Y+ +
Sbjct: 228 MLNEMLDNGLVPNGVTFTTLIDG--HCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYG 285
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + G +A +++ M G +PD ITY+ +I G CK G E + M D
Sbjct: 286 LCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLD 345
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LI G C A +M+ D +++N F V A KLL
Sbjct: 346 EVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLR 405
Query: 503 EM 504
EM
Sbjct: 406 EM 407
>gi|115453133|ref|NP_001050167.1| Os03g0363700 [Oryza sativa Japonica Group]
gi|108708311|gb|ABF96106.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113548638|dbj|BAF12081.1| Os03g0363700 [Oryza sativa Japonica Group]
Length = 564
Score = 115 bits (288), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 139/291 (47%), Gaps = 13/291 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G +T+ Y I+ L H+ + V E+K GY +D TY K +++
Sbjct: 249 AGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDE 308
Query: 320 AVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKSVY 376
A +++ M+D +P+ CSL+ + + F +A K E LG L +S
Sbjct: 309 ARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGD-------FEMARKVYDEMLGKGLKESTV 361
Query: 377 DG--IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ GR DEA M + M G E D ITY+ +I GLCKAGR +A V +++
Sbjct: 362 SCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQL 421
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+G P + T+T LI C +VD A+ M K + A + D +INGF +R
Sbjct: 422 LSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRP 481
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
L M++K L+P + TF +L+E L + R+++A+ +L M K +
Sbjct: 482 EDGMAWLAGMLKK-NLKPREHTFNSLVELLSSSGRVDDALLVLNTMFKIGH 531
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 2/215 (0%)
Query: 335 SVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
SV D + R I + +G RV N+ + G ++ Y L K+G DEA
Sbjct: 251 SVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEAR 310
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M + G EP+ Y ++ CKAG FE A V DEM G + IL+ G
Sbjct: 311 QIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKVYDEMLGKGLKESTVSCNILVTGF 370
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C VD AL F +M++K + D ++LI G R++ A ++ +++ L P
Sbjct: 371 CTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEAIQVYEQLLSS-GLEPS 429
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+TF LI+ + +++ A+ LL++M + P
Sbjct: 430 VSTFTPLIDTMCEEGQVDAAVELLKVMHAKGLEPL 464
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/293 (21%), Positives = 111/293 (37%), Gaps = 42/293 (14%)
Query: 322 KLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF P P + L+R+ S+ P GL R+ G +
Sbjct: 170 RLFSAFSSSPDFPGDAATVAFLVRACSAEGRPLDGL--RLLRDGARRGVPPQLDAVADLV 227
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF------------------------ 416
A + F + + + M AG PD + Y ++I
Sbjct: 228 AAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRIIHGLFAHKMGSEALRVFNEIKLRGYN 287
Query: 417 -----------GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
GLCK G ++A + +EM + G P+ + L+ +C A + + A
Sbjct: 288 VDAVTYTTAIDGLCKMGCIDEARQIWNEMVDKGMEPNEYAYCSLVAYYCKAGDFEMARKV 347
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ +M+ K ++L+ GF + RV+ A + EM++K + T+ LI+ L
Sbjct: 348 YDEMLGKGLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKK-GIEHDVITYNILIQGLC 406
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVK 575
A RL EA+ + + P P + + + G V+ A E LK + K
Sbjct: 407 KAGRLSEAIQVYEQLLSSGLEPSVSTFTPLIDTMCEEGQVDAAVELLKVMHAK 459
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 93/232 (40%), Gaps = 37/232 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +T++ N ++ H V + + EEM K+G E D+ TY + + K + +A
Sbjct: 355 GLKESTVSCNILVTGFCTHGRVDEALGMFEEMVKKGIEHDVITYNILIQGLCKAGRLSEA 414
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++++E ++ +PSV S + +
Sbjct: 415 IQVYEQLLSSGLEPSV-------------------------------------STFTPLI 437
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + G+ D A +++K M G EP +I G CKA R ED L M +
Sbjct: 438 DTMCEEGQVDAAVELLKVMHAKGLEPLARINDSIINGFCKARRPEDGMAWLAGMLKKNLK 497
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
P T+ L++ ++ VD ALL M + ++ + +L+ + K
Sbjct: 498 PREHTFNSLVELLSSSGRVDDALLVLNTMFKIGHELGSLACTMLVEQLCTGK 549
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 10/192 (5%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYES----LGNSLSKSVYDGIHRALTKLGRF 389
PS++ + +RS PDL VFR+ + + S G++ + + + RA + GR
Sbjct: 147 PSLRALNFAMRSALRAARPDL--VFRLFSAFSSSPDFPGDAATVAF---LVRACSAEGRP 201
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+ ++++ G P + ++ A F L M G +PD + +
Sbjct: 202 LDGLRLLRDGARRGVPPQLDAVADLVAAFSAAANFGKVSETLHLMIAAGSVPDTVIYQRI 261
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I G A AL F ++ + Y+ DA I+G ++ A ++ EM++K
Sbjct: 262 IHGLFAHKMGSEALRVFNEIKLRGYNVDAVTYTTAIDGLCKMGCIDEARQIWNEMVDK-G 320
Query: 510 LRPWQATFKTLI 521
+ P + + +L+
Sbjct: 321 MEPNEYAYCSLV 332
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 170/405 (41%), Gaps = 62/405 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTY 304
+AL FF W G+ H+ YN ++ + + VR+F W V++ MK E+ I+T+
Sbjct: 124 QALSFFNWATSRPGFTHHPEPYNEMIDLAGK---VRNFDLGWQVIDLMKARNVEISIETF 180
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ R++ + + +AV F M D KP S+L+ + R A +
Sbjct: 181 SILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRK---------RRATEA 231
Query: 365 ESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+S +SL VY + R + G EAE++ MK AG P+ TY+ VI L
Sbjct: 232 QSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDAL 291
Query: 419 C-----------------------------------KAGRFEDACNVLDEMEENGCIPDI 443
C KAGR E V ++M+ GC PD
Sbjct: 292 CRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDT 351
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ LI+ HC +D AL M++K +A + L + VNGA++L +
Sbjct: 352 VTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAK 411
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
M E ++ + T+ L+ + + + + L + M + + P + I+ + G
Sbjct: 412 MKE-LKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMG 470
Query: 561 TVEDASEFLKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKDLL 603
+A +F + + ++ PS Y +V + G+ + ++L+
Sbjct: 471 HWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELV 515
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/365 (25%), Positives = 162/365 (44%), Gaps = 11/365 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T ++ R V D ++V++M + GY DI Y I K R + DA
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ F+ + +P+V + L+ + + D + R K + N ++ Y +
Sbjct: 210 LDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVIT---YSAL 266
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K G+ EA+++ + M +PD +TYS +I GLC R ++A + D M GC
Sbjct: 267 LDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ ++ LI G C A V+ + F KM ++ + + LI GF V+ A +
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
+M + + P T+ L+ L LE+A+ + M+K + +Q +
Sbjct: 387 FFSQM-DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH--IRQD 613
K G VEDA +LS+K P Y + +G +E + L K ++ D
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505
Query: 614 SKISL 618
S + L
Sbjct: 506 SMLCL 510
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/293 (23%), Positives = 128/293 (43%), Gaps = 7/293 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ LF M+ PS+ D + LL +I + D+ V + K E LG +
Sbjct: 66 LHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDV--VISLGKKMEVLGIRNDLYTF 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + A ++ M G+EPD +T ++ G C+ R DA +++D+M E
Sbjct: 124 NIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PDI + +I C V+ AL F ++ K + L+NG + R N
Sbjct: 184 IGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +LL +MI++ ++ P T+ L++ + ++ EA + M + + P + I
Sbjct: 244 AARLLRDMIKR-KITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLI 302
Query: 557 SKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ +++A++ + K +P +Y + F R + L K
Sbjct: 303 NGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 169/364 (46%), Gaps = 9/364 (2%)
Query: 191 DGMVKEIAMDN--VAKTLVDVVL---GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
DG+ K+I +N + K + DV W + L + + V+ VLK L+
Sbjct: 46 DGVDKKIPRNNEGIRKGVDDVCCILESGPWGPTLENSLSALGEKPLPELVIGVLKRLKDA 105
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
A+ +F+W + + H YN +L V+AR+ ++EEM G+ + I
Sbjct: 106 NT-AVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISI 164
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
++ K R + +A + + M ++P+ ++L+ ++S + PD L+ + ++ +
Sbjct: 165 ELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLI--LFHQMQ 222
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
LG ++ ++ + R + GR D A ++ MK+ + D + Y+ I KAG+ +
Sbjct: 223 ELGYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVD 282
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+ EM+ +G +PD T+T +I C AN +D A+ F ++ + A + +I
Sbjct: 283 MSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMI 342
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G+ S + + AY LL K + P + ++ L RR+EEA+ + MK+
Sbjct: 343 MGYGSAGKFDEAYGLLERQKAKGSI-PSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV 401
Query: 546 PPFP 549
P P
Sbjct: 402 PNVP 405
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 108/424 (25%), Positives = 179/424 (42%), Gaps = 21/424 (4%)
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
W MK ++ TY S++GVL KA + + L + + K ++
Sbjct: 285 WKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMG 344
Query: 209 VVLGSDWDDKIGKKLEDMKIE------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+D+ G LE K + ++ N +LT L + R +AL F + +
Sbjct: 345 YGSAGKFDEAYGL-LERQKAKGSIPSVIAYNCILTCLGKKRRVE-EALRIFEEMKRDA-- 400
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
N TYN ++ +L R + + ++M++ G ++ T + + K + +E+A
Sbjct: 401 VPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACS 460
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+FE M D P+ S L+ + D + + K G+ VY + R+
Sbjct: 461 IFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA--YSLYEKMLDCGHVPGAIVYTSLIRS 518
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNI---TYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR ++ K+ K M + G PD TY +F KAG E + E+ +G
Sbjct: 519 FFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVF---KAGETEKGRALFREINAHGF 575
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IPD ++++ILI G A + F M E+ D + +I+GF +VN AY+
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635
Query: 500 LLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
LL EM KV+ P T+ ++I+ L RL+EA L K + I
Sbjct: 636 LLEEM--KVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693
Query: 559 FGTV 562
FG V
Sbjct: 694 FGKV 697
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 134/284 (47%), Gaps = 5/284 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ L + V D +++ E+M G+ Y + R F K ED K++
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ P + + + + + G +FR N + + ++ S S+ IH L
Sbjct: 533 KEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSIL--IH-GL 589
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K G +E ++ AMK G D Y+ VI G CK+G+ A +L+EM+ G P +
Sbjct: 590 VKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTV 649
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ +I G + +D A + F + + + LI+GF R++ AY ++ E
Sbjct: 650 VTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEE 709
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++K L P T+ L++ L+ A + EA+ + MK PP
Sbjct: 710 LMQK-GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP 752
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/468 (21%), Positives = 183/468 (39%), Gaps = 72/468 (15%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
L E + ++ +D E+A F P+ ++M+ L L++
Sbjct: 414 LCREGKLNAALEIRDDMERAGLF-----------PNVLTVNIMIDRLCKAQKLEEACSIF 462
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M + C T+ S++ L K + D +L + K + +V +V L
Sbjct: 463 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYE------KMLDCGHVPGAIVYTSLI 516
Query: 213 SDWDDKIGKKLEDMKI-------------ELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ K G+K + KI L + ++ V K +AL FR + H
Sbjct: 517 RSFF-KCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRAL--FREINAH 573
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G+ + +Y+ ++ L + + + + MK++G +D Y + F K +
Sbjct: 574 -GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNK 632
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A +L E M + P+V Y +
Sbjct: 633 AYQLLEEMKVKGHPPTV-------------------------------------VTYGSV 655
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K+ R DEA + + K+ G + + + YS +I G K GR ++A +++E+ + G
Sbjct: 656 IDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGL 715
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ TW L+ A E++ AL+CF M + + +LING ++ N A+
Sbjct: 716 TPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFV 775
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM +K+ L+P T+ T+I L A + EA L K P
Sbjct: 776 FWQEM-QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIP 822
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 190/464 (40%), Gaps = 72/464 (15%)
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++GVLK+ K A+ Q+ + +++ +L+ V+ + D + + LE+M +
Sbjct: 95 VIGVLKRLKDANTAVNYFQWAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSL- 153
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
SG+ ++ ++ + +R+ ++++
Sbjct: 154 ------------------------------SGFGPSSNISIELVANCVKSRKLREAFDII 183
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+ M+K + Y + + R + + LF M + Y+ +V + L+R +
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
D L K SL + +Y+ K G+ D + K MK+ G PD++
Sbjct: 244 GRVDAALSLLDEMKSNSLDADI--VLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDV 301
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA------- 462
TY+ +I LCKA R ++A + +++E+N +P + +I G+ +A + D A
Sbjct: 302 TYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQ 361
Query: 463 ---------------LLCFAKM------------MEKNYDADADLLDVLINGFLSQKRVN 495
L C K M+++ + ++LI+ + ++N
Sbjct: 362 KAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLN 421
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A ++ +M E+ L P T +I++L A++LEEA ++ M + P F
Sbjct: 422 AALEIRDDM-ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSL 480
Query: 553 VQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
+ + K G V+DA S + K L P + Y + SFF GR
Sbjct: 481 IDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGR 524
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 127/287 (44%), Gaps = 21/287 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T YN ++ + V + ++EEMK +G+ + TY + K +++A LF
Sbjct: 613 DTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLF 672
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKSVY--DG 378
E K +V S L+ G V R+ Y E + L+ +VY +
Sbjct: 673 EEAKSNGIKLNVVVYSSLIDG--------FGKVGRIDEAYLIMEELMQKGLTPNVYTWNC 724
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ AL K +EA ++MK+ P+ ITYS +I GLC+ +F A EM++ G
Sbjct: 725 LLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLG 784
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+ T+T +I G A + A F++ D+ + +I G S + AY
Sbjct: 785 LKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAY 844
Query: 499 KLLVEMIEKVRLRPWQATFKT---LIEKLLGARRLEEAMNLLRLMKK 542
L E+ RL+ KT L++ L A LE+A + ++K+
Sbjct: 845 ALF----EETRLKGCNIHTKTCVVLLDALHKAECLEQAAIVGAVLKE 887
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 162/349 (46%), Gaps = 12/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN I+ + R V D +++ + G + D +Y + + + +D
Sbjct: 207 GCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDV 266
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+LF MM+ P+ +L+R + + V + ++E N+ ++ + +
Sbjct: 267 EELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT---TLCNIV 323
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++ K GR D+A K + M + G PD I+Y+ V+ GLC+A R+ DA +L EM N C
Sbjct: 324 INSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNC 383
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ T+ I C +++A++ +M E + L+NGF Q ++ A
Sbjct: 384 PPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSA-- 441
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
+E+ + +P T+ TL+ L A RL+ A L+ M ++ PP F V +
Sbjct: 442 --LELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFF 499
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY 604
+ G +++A E ++ + P+ Y +F+ + +A +LL+
Sbjct: 500 CQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 163/404 (40%), Gaps = 61/404 (15%)
Query: 246 PVKALGFFRWVGEHSGYKH---------------NTITYNGILRVLARHESVRDFWNVVE 290
PV + V + Y H + TY ++RVL V D ++++
Sbjct: 107 PVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVAPDAYTYTPLIRVLCDRGRVADALSLLD 166
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + G + ++ TY + K E A+ + + M P++
Sbjct: 167 DMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNI-------------- 212
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
Y+ I + + GR D+A ++ + + G +PD ++
Sbjct: 213 -----------------------VTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVS 249
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++ GLC + R++D + EM E C+P+ T+ +LI+ C V+RA+ +M
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMT 309
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
E + L +++IN Q RV+ A+K L M P ++ T+++ L A R
Sbjct: 310 EHECATNTTLCNIVINSICKQGRVDDAFKFLNNM-GSYGCNPDTISYTTVLKGLCRAERW 368
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAA---YL 584
+A LL+ M + N PP F +I G +E A ++ + +E+ + Y
Sbjct: 369 NDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM--QEHGCTVGVVTYN 426
Query: 585 QVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKV 628
+ F +G A +L P + +LL G + ++
Sbjct: 427 ALVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERL 470
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 108/501 (21%), Positives = 203/501 (40%), Gaps = 37/501 (7%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAK-- 178
++ +P+ Y+++L + +Q L M+ C TY I+ G+ ++ +
Sbjct: 170 RRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 229
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAKT--LVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
A DL LN+ + D V+ T L + WDD E M+ N V
Sbjct: 230 DARDL--LNRLFSYGCQP---DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEV- 283
Query: 237 TVLKELRIYPV-----KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
T +R + +A+ + + EH NT N ++ + + V D + +
Sbjct: 284 TFDMLIRFFCRGGMVERAIQVLQQMTEHE-CATNTTLCNIVINSICKQGRVDDAFKFLNN 342
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD-----CSLLLRSI 346
M G D +Y + + + DA +L + M+ P+ C L + +
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ + + + G ++ Y+ + G D A ++ ++M +P
Sbjct: 403 -------IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKP 452
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ ITY+ ++ GLC A R + A ++ EM C P++ T+ +L+ C +D A+
Sbjct: 453 NTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELV 512
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+MME + + L +G A +LL ++ K + P TF ++I L
Sbjct: 513 EQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSK-GVSPDVITFSSIIGILSK 571
Query: 527 ARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAA 582
R+EEA+ + L + P + + K +++A +FL +S P+ +
Sbjct: 572 EDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNEST 631
Query: 583 YLQVFESFFNEGRHYEAKDLL 603
Y+ + E EG EA+DLL
Sbjct: 632 YIILIEGLAREGLLKEAQDLL 652
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 8/204 (3%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD +++I LC+ GR DA VL E +G D+ + L+ G+C +D A
Sbjct: 70 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 129
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
M DA LI + RV A LL +M+ + +P T+ L+E
Sbjct: 130 RRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRR-GCQPNVVTYTVLLE 185
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYP 578
+ E+AM +L M+ + P + + + + G V+DA + L L S P
Sbjct: 186 AMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQP 245
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+ +Y + + R + ++L
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEEL 269
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 173/410 (42%), Gaps = 61/410 (14%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY- 304
P A+ FF W GE GYKH+ +YN +L +L + V +++ G ++ T+
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFK 66
Query: 305 ---------------IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL--RSIS 347
++ R +F + D V +F F++ G +K D ++ L S
Sbjct: 67 ILIRGNCKAGQATRALEFLRALDEFSVAPD-VYIFNFLIHGLFKDGNPDQAVKLFENMES 125
Query: 348 SINNPDLGLVFRVANKYESLGN------SLSKSVYDG-------------IHRALTKLGR 388
S NPD+ V + GN L + + G I+ + K G
Sbjct: 126 SRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGD 185
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+EA +++ MK AG PD ITY+ +I LC AGR +A +L M C PD+ T+
Sbjct: 186 VEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNT 242
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L+ G C A + RAL +M +N D +L+NG +V A+ LL E++ +
Sbjct: 243 LLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQG 302
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ---------NYPPFPEPFVQY---- 555
+ P + +L++ L + +EEA L++ M + N P P Y
Sbjct: 303 YI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVP---PLFTYNIVL 358
Query: 556 --ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G++ A + L + Y P Y + + R EA DL
Sbjct: 359 GGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDL 408
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 33/285 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITY ++ L R V+ + ++EE+ ++GY D+ Y + K +E+A KL
Sbjct: 271 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 330
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M S ++ +L + SIN P L Y+ + L
Sbjct: 331 KEM-------SARE---ILAEMVSINMVPPL-------------------FTYNIVLGGL 361
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K G +A ++ + G+ PD +TY+ +I GLCKA R +AC++ DEM GC P+
Sbjct: 362 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPND 421
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T ++ G C VD A +M K + + + LI+G R++ A +L
Sbjct: 422 VTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDA 481
Query: 504 M-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M + V L + ++ LI ++ R+ EAM + M + + P
Sbjct: 482 MRGQGVALDDF--AYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 100/214 (46%), Gaps = 10/214 (4%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A + G++ D +Y+ ++ L K+G V ++ +GC P++ T+ ILI+G+C A
Sbjct: 17 AGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAG 76
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+ RAL + E + D + + LI+G + A KL E +E R+ P T+
Sbjct: 77 QATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF-ENMESSRVNPDIFTY 135
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY-------ISKFGTVEDASEFLK 570
T+I L + LE+A LL M ++ P+ V Y I K G VE+A E L
Sbjct: 136 NTVISGLCKSGNLEKARELLEEMIRRGGKSAPD-IVTYNTLINAGICKDGDVEEALEILD 194
Query: 571 ALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + P Y + + GR EA ++L
Sbjct: 195 GMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 12/246 (4%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L K G K+ K + ++G P+ +T+ +I G CKAG+ A L ++
Sbjct: 30 YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E PD+ + LI G D+A+ F M + D + +I+G +
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 496 GAYKLLVEMIEK-VRLRPWQATFKTLIEK-LLGARRLEEAMNLLRLMKKQNYPPFPE--- 550
A +LL EMI + + P T+ TLI + +EEA+ +L MK P P+
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG--PAPDVIT 207
Query: 551 --PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-CP 607
+ + G V +A+E LK +S P + + + F G A ++L + C
Sbjct: 208 YNSIIHALCVAGRVVEAAEILKTMSCS--PDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 265
Query: 608 HHIRQD 613
+I D
Sbjct: 266 ENILPD 271
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 94/227 (41%), Gaps = 11/227 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY--EM-------DIDTYIKISRQF 311
GY + I Y ++ L + + + +V+EM EM + TY +
Sbjct: 302 GYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGL 361
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + AV L ++ Y P V + L+ + N + +A++ SLG
Sbjct: 362 IKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR--VREACDLADEMASLGCFP 419
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + L ++GR D+A ++ M P+ + Y+ +I GLCK+ R +DAC VL
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
D M G D + LI V A+ + +M+ + + D
Sbjct: 480 DAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDG 526
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 52/389 (13%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + + + V V+K VK + FFRW + Y+H+T TY ++
Sbjct: 40 WGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVK-MQFFRWAAKRRNYEHDTSTYMALIH 98
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIK-ISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L E + W +++EM + + T + + R +M+ A+ +F Y+
Sbjct: 99 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIF-------YQ 151
Query: 334 PSVQDCSLLLRSISSI-----NNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLG 387
+ C + ++ +S+ + V ++ N+ + G+ +V Y + A KLG
Sbjct: 152 IKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLG 211
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R D A +++ MK G +P Y+ +I K A ++ +EM C PD+ T+T
Sbjct: 212 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 271
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI+G A +D A F +M + D ++ +IN R++ A KL EM E
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM-ET 330
Query: 508 VRLRPWQATFKTLIEKLLGAR------------------------------------RLE 531
+R P T+ T+I+ L ++ R+E
Sbjct: 331 LRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 390
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+AM LL M ++ +PP P + I G
Sbjct: 391 KAMMLLEEMDEKGFPPCPAAYCSLIDALG 419
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 122/565 (21%), Positives = 217/565 (38%), Gaps = 101/565 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L ++ H V V+ K D FF W ++ + ++ Y ++
Sbjct: 40 WGPDAEKALEVLMLRVDHWLVREVM-KTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIH 98
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS----ILGVLK------------KAKKAS 181
L + + W ++ M + + T LS +LG K K +K
Sbjct: 99 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQ 158
Query: 182 DLA-ALNQF-----HDGMVKEI-----AMDNVAKTLVDVVLGSDWDD---KIGKKLEDMK 227
+A A N H+G +++ M D V S K+G++ D
Sbjct: 159 PIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRR--DSA 216
Query: 228 IELSDNFVLTVLKEL------RIYPVKALGFFRWVGEHSGY-----------KHNTITYN 270
I+L L +KE+ +IY + FF++ H + + TY
Sbjct: 217 IQL-----LNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 271
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++R L + + + ++ EM++EG D + K ++DA+KLF+ M
Sbjct: 272 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 331
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLG 387
PSV + +++++ + V + +E + G S S Y + K
Sbjct: 332 RCIPSVVTYNTIIKALFESKSR----ASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 387
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN---------- 437
R ++A +++ M GF P Y +I L KA R++ AC + E++EN
Sbjct: 388 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 447
Query: 438 -------------------------GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
GC PD+ + L+ G +D AL +M E
Sbjct: 448 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 507
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D + ++++NG + A ++L M ++ +RP ++ T++ L A EE
Sbjct: 508 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNM-KQSTVRPDVVSYNTVLGALSHAGMFEE 566
Query: 533 AMNLLRLMKKQNYPPFPEPFVQYIS 557
A +LMK+ N F + Y S
Sbjct: 567 AS---KLMKEMNTLGFEYDLITYSS 588
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A F+ + E+ G + Y +++ L + + D N+ +EM K G D+ Y +
Sbjct: 427 ACELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 485
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ M+++A+ M + P + +++L ++ P + E L
Sbjct: 486 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM--------EMLS 537
Query: 369 NSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
N +V Y+ + AL+ G F+EA K+MK M GFE D ITYS ++ + K
Sbjct: 538 NMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 82/195 (42%), Gaps = 2/195 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G+ Y ++ L + + + +E+K+ Y + + K +
Sbjct: 400 DEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRL 459
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DA+ +F+ M P V + L+ ++ D L + + G + Y+
Sbjct: 460 DDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEAL--STMRRMQEHGCIPDINSYN 517
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L K G A +M+ MK + PD ++Y+ V+ L AG FE+A ++ EM
Sbjct: 518 IILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTL 577
Query: 438 GCIPDIKTWTILIQG 452
G D+ T++ +++
Sbjct: 578 GFEYDLITYSSILEA 592
>gi|255660866|gb|ACU25602.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 484
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 231 VSVDQVDDALRLVEEM-KGFGIKPNTITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G + A++ LKA+ P+ A Y + +F G++ +A LL
Sbjct: 290 DNSIFMRLISSHCKSGNPDAAADVLKAMIRLSVPTEAGHYGXLIXNFCKVGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L +H S+ + +N+ EM+ +G +I TY + F
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D KL M+ P+V S+L+ S
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDS-------------------------------- 342
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
K G+ EAE++ K M + G PD ITY+ +I G CK + A ++D M
Sbjct: 343 -----FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++N A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + ++ P T+K L++ L E+A+ + ++K +
Sbjct: 458 KELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA+ L K
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L F K LG + + + L GR EA +++ M G +PD IT +
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ GLC +G+ +A ++D+M E GC P+ T+ ++ C + + A+ KM E+N
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
DA ++I+G ++ A+ L EM E + T+ LI A R ++
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
LLR M K+ P F I F G + +A E K + + P + Y + +
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 590 FFNEGRHYEAK---DLLYK--CPHHIRQDSKISLLFGSAKSNKV 628
F E +A DL+ C +IR + L+ G K+N++
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFN--ILINGYCKANRI 419
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 128/309 (41%), Gaps = 40/309 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + +R+ + +EM G D TY + F K ++ A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ P+++ ++L+ N D GL +FR K G Y+ + +
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVTYNTLIQGF 448
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITY-------------------------------- 411
+LG+ + A+++ + M + P+ +TY
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 412 ---SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ +I G+C A + +DA ++ + G P +KT+ I+I G C + A L F K
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M E + D ++LI L + K L+E +++ +T K +I+ L R
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVK-LIEELKRCGFSVDASTIKMVIDMLSDGR 627
Query: 529 RLEEAMNLL 537
+ +++L
Sbjct: 628 LKKSFLDML 636
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ K ++D + K M+ G + T S +I C+ + A + + ++ + G P
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T++ LI G C V AL +M+E + D ++ L+NG + A L+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
+M+E +P T+ ++ + + + AM LLR M+++N + + + K
Sbjct: 217 DKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 559 FGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
G++++A + +K ++ Y + F N GR + LL
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D+A + + M ++ P I +S++ + K +++ + +ME G ++ T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C ++ A K+++ Y+ + LING + RV+ A +L+ M+E +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE-MG 188
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDAS 566
+P T TL+ L + + EAM L+ M + P P + + K G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 567 EFLKAL 572
E L+ +
Sbjct: 249 ELLRKM 254
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 162/347 (46%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +TYN ++ + + MK + + D TY + K R +E+A
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ +++ P+ + L+ N DL F ++ + G S Y+ +
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCC--NKGDLDKAFAYRDEMMNRGIVASVFTYNLLI 364
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL R +EAE M+K M+ G EPD +TY+ I G C+ G + A ++ DEM E
Sbjct: 365 HALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIR 424
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P ++T+T LI N + A F K +++ D + + LI+G ++ A++L
Sbjct: 425 PTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQL 484
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
L EM + ++ P + TF TL++ R++EEA LL MK++ P + IS +
Sbjct: 485 LKEM-DNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYS 543
Query: 560 --GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G ++DA E F + LS+ P+ Y + + + G A++LL
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 129/274 (47%), Gaps = 23/274 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ L + + + ++++EM+++G E D+ TY + + + A
Sbjct: 352 GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKA 411
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M++ +P+V+ + L+ VF N+ KS+ +G+
Sbjct: 412 LSLFDEMVEKNIRPTVETYTSLID------------VFGKRNRMSEAEEKFKKSIKEGML 459
Query: 381 RALTKL----------GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ G D A +++K M NA PD +T++ ++ G C+ + E+A +
Sbjct: 460 PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKL 519
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
LDEM+E G PD ++ LI G+ ++ AL F +M+ +D + LI G+
Sbjct: 520 LDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSK 579
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ A +LL EM K + P +T+ +IE +
Sbjct: 580 IGEADHAEELLREMQSK-GITPDDSTYLYVIEAM 612
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 136/298 (45%), Gaps = 13/298 (4%)
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
+ +FR ++A++ M + P + C+ LL + +N + + + V + +
Sbjct: 157 YCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNK--IKMAWFVYEEMVKMNIK 214
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
S ++ + L + G++ +A+ + M+ G +P+ +TY+ VI G C G+FE A +
Sbjct: 215 SSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKI 274
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
M++ PD T+ I C ++ A K++E +A + LI+G +
Sbjct: 275 FKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCN 334
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ ++ A+ EM+ + + T+ LI L +R+EEA ++++ M+++ P
Sbjct: 335 KGDLDKAFAYRDEMMNR-GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVV 393
Query: 551 PFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKD 601
+ I+ + +A KALS+ + P+ Y + + F R EA++
Sbjct: 394 TYNIQINGYCRCGNAK---KALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEE 448
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 77/194 (39%), Gaps = 36/194 (18%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD--------------------------- 407
V+D + A + + DEA + + MK P
Sbjct: 149 VFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEM 208
Query: 408 ---NITYSQVIFG-----LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
NI S V F LC+ G+++ A + + ME G P++ T+ +I G+C +
Sbjct: 209 VKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKF 268
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+ A F M +KN D + I+ ++R+ A +L +++E L P T+
Sbjct: 269 EAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLES-GLVPNAVTYNA 327
Query: 520 LIEKLLGARRLEEA 533
LI+ L++A
Sbjct: 328 LIDGCCNKGDLDKA 341
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 154/382 (40%), Gaps = 20/382 (5%)
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR-----HESVRDFWN 287
+ V+ L L P KAL H G+ ++YN +L L R H D
Sbjct: 136 DLVVKSLSRLGFVP-KALTLLHLANRH-GFAPTVLSYNAVLDALLRRSSSNHRDYDDAER 193
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
V +M + G ++ TY I R +E + M P+V + L+ +
Sbjct: 194 VFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASC 253
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ A + +L Y+ + L GR E ++++ M+ G PD
Sbjct: 254 KKKKVKEAMALLRAMAVGGVAANLIS--YNSVINGLCGKGRMSEVGELVEEMRGKGLVPD 311
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY+ ++ G CK G +L EM G P++ T+T LI C A + RA+ F
Sbjct: 312 EVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFD 371
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M + + LI+GF + +N AYK+L EMI P T+ L+
Sbjct: 372 QMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVS-GFSPSVVTYNALVHGYCFL 430
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSS 580
R++EA+ +LR M ++ PP V Y + E KA +KE P +
Sbjct: 431 GRVQEAVGILRGMVERGLPP---DVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487
Query: 581 AAYLQVFESFFNEGRHYEAKDL 602
Y + + + + EA DL
Sbjct: 488 VTYSSLIQGLCLQQKLVEAFDL 509
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/434 (22%), Positives = 184/434 (42%), Gaps = 62/434 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y++++R +V++ L++ +R+M+++ TY +++ K KK + AL
Sbjct: 205 PNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMAL 264
Query: 187 NQFHDGMVKEIAMDNVAKTLV------DVVLGSDWDDKIGKKLEDMKIE--LSDNFVLTV 238
++ +A+ VA L+ + + G ++G+ +E+M+ + + D
Sbjct: 265 -------LRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNT 317
Query: 239 L-----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
L KE ++ L VG+ G N +TY ++ + + ++ + ++M+
Sbjct: 318 LVNGFCKEGNLHQGLVL-LSEMVGK--GLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
G + TY + F + +M +A K+ M+ + PSV
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSV----------------- 417
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
Y+ + LGR EA +++ M G PD ++YS
Sbjct: 418 --------------------VTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
VI G C+ A + +EM E G +PD T++ LIQG C ++ A F +MM +
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D LIN + ++ A +L EM+++ L P T+ LI L R + A
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL-PDNVTYSVLINGLNKKARTKVA 576
Query: 534 MN-LLRLMKKQNYP 546
LL+L +++ P
Sbjct: 577 KRLLLKLFYEESVP 590
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 115/275 (41%), Gaps = 43/275 (15%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-----FED 426
S +V+D + ++L++LG +A ++ GF P ++Y+ V+ L + ++D
Sbjct: 131 SSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDD 190
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V +M NG P++ T+ ++I+G + ++++ L KM ++ + + LI+
Sbjct: 191 AERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250
Query: 487 GFLSQKRVNGAYKLL-------------------------------VEMIEKVR---LRP 512
+K+V A LL E++E++R L P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL 569
+ T+ TL+ L + + LL M + P + I+ K G + A E
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370
Query: 570 KALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ V+ P+ Y + + F +G EA +L
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVL 405
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 84/446 (18%), Positives = 166/446 (37%), Gaps = 27/446 (6%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K P Y+ ++ + +L Q V L M TY +++ + KA S
Sbjct: 306 KGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSR 365
Query: 183 LAALNQFHDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
A+ F V+ + + TL+D ++ K L +M + V+T
Sbjct: 366 --AVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNAL 423
Query: 242 LRIYPV-----KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
+ Y +A+G R + E G + ++Y+ ++ R + + + EEM ++G
Sbjct: 424 VHGYCFLGRVQEAVGILRGMVER-GLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D TY + + + + +A LF MM P + L+ + + +L
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCV--DGELSK 540
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI- 415
R+ ++ G Y + L K R A++++ + PD++TY+ +I
Sbjct: 541 ALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIE 600
Query: 416 --------------FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G C G +A V M + P+ + ++I GH V +
Sbjct: 601 NCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHK 660
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
A + ++ ++ + L+ + + +LL ++ RL + K L+
Sbjct: 661 AYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVA-KVLV 719
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPP 547
E ++ +N+L M K P
Sbjct: 720 EVNFKEGNMDAVLNVLTEMAKDGLLP 745
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 121/516 (23%), Positives = 214/516 (41%), Gaps = 48/516 (9%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE-ETYLSILGVLKKAKKASDL 183
F P +++++ ++ + +R M+ED+ +T+ +L L K+ K L
Sbjct: 90 FLPDVETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKV--L 147
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
AA++ F +D T +V DW K KK++D + +++++
Sbjct: 148 AAMDHFETTTTNGCTID--IHTYTAIV---DWLAK-NKKIQD---------AVALMEKI- 191
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+G TYN +L L + + + +++ ++ G D+ T
Sbjct: 192 --------------TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVT 237
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y + K + +A KLF E + G +V +L+ + + P V++
Sbjct: 238 YTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMT 297
Query: 363 KYESLGNSLSKS-VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ + ++ S + DG L K GR A ++ K+M+ G P+ + YS +I GLCKA
Sbjct: 298 SQGCVPDVVTLSTMIDG----LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ + A +L +M++ C PD T+ ILI G C + +V+ A F +M+E D
Sbjct: 354 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 413
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++L++GF + A + +M P T+ TLI L R+L +A + MK
Sbjct: 414 NILVSGFCKAGNTDAACGVFDDM-SSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMK 472
Query: 542 KQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
++ PP V + K G +E + +S ++ R E
Sbjct: 473 ERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANRVDE 532
Query: 599 AKDLLYKC-----PHHIRQDSKISLLFGSAKSNKVT 629
A L PH +S IS L SAK N T
Sbjct: 533 AVSLFNAIRKEGMPHPYAYNSIISTLIKSAKVNPCT 568
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 155/377 (41%), Gaps = 49/377 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++H+ T N +L V AR + R+ N+++ + D++T+ + + R E+A
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 321 VKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
+ E D PS++ +L+L + G V + +E+ G ++ Y
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKS-----GKVLAAMDHFETTTTNGCTIDIHTY 168
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K + +A +M+ + G P TY+ ++ GLCK GR E+A ++L ++ +
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 228
Query: 437 NGCIPDIKT-----------------------------------WTILIQGHCAANEVDR 461
NGC PD+ T +T LI+G A ++ +
Sbjct: 229 NGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQ 288
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
A + M + D L +I+G R+ A ++ M E L P + + LI
Sbjct: 289 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM-EARGLAPNEVVYSALI 347
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFL-KALSVKEY 577
L AR+++ A+ +L MKK P + + + K G VE A F + L
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407
Query: 578 PSSAAYLQVFESFFNEG 594
P Y + F G
Sbjct: 408 PDVYTYNILVSGFCKAG 424
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 151/328 (46%), Gaps = 22/328 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N TY ++R L + + +V+EM + G ++ + + + K M+ +
Sbjct: 214 NGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVE 273
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN-SLSKSV--Y 376
A ++F+ M++ Y+P++ C+ L+ N D+ ++++G + V Y
Sbjct: 274 AREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMA-----RELFDAIGEWGFKRDVWTY 328
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K+GR +A ++ M G P+ +TY+ +I LCKAG A ++ M
Sbjct: 329 NVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR 388
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+G PDI T IL+ G C + +D+A+L F +++E D +LI+G + +R+
Sbjct: 389 SGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGE 448
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M K L P T+ LI+ L + R+ A LL M + P P+ I
Sbjct: 449 AMNLLRDMHLK-NLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKG--PLPDTITYSI 505
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYL 584
L AL K++ A +L
Sbjct: 506 -----------LLDALWKKQHLDEAVFL 522
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 147/336 (43%), Gaps = 14/336 (4%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F +GE G+K + TYN + + VRD V +EM +EG +I TY +
Sbjct: 312 LFDAIGEW-GFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCL 370
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + A ++ + M P + C +LL + D ++ + N+ G +
Sbjct: 371 CKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAIL--LFNQLVESGLTP 428
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + R EA +++ M P +TYS +I GLC++GR +A +L
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+EM G +PD T++IL+ +D A+ F +M+++ + D ++I+G+
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKS 548
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+R++ A L EM K L P T+ L + + + +++ N PP
Sbjct: 549 ERIDEAINLFREMHMK-NLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLK 607
Query: 552 FVQYISKFGTVEDASEFL--KALSVKEYPSSAAYLQ 585
++ + K SE L K L+ E+ S A LQ
Sbjct: 608 YLAALCK-------SEHLDYKCLA-SEFASYAGSLQ 635
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 163/396 (41%), Gaps = 53/396 (13%)
Query: 237 TVLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM-- 292
TVLK L + +KAL F + ++G+ N ++Y ++ L + V + N++ +
Sbjct: 112 TVLKGLCVNGGVLKALEFHDEI-VNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEK 170
Query: 293 ----KKEGY--EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+K+G+ + ++ Y + + +++ + + MM P+ L+R +
Sbjct: 171 EKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGL 230
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ G F + ++ G +S V+ + L K G EA +M M N G+EP
Sbjct: 231 CGVGKFLEG--FGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEP 288
Query: 407 DNI-----------------------------------TYSQVIFGLCKAGRFEDACNVL 431
+ + TY+ I G CK GR DA V
Sbjct: 289 NIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVF 348
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
DEM G +P+I T+ LI C A EV A M D +L++G
Sbjct: 349 DEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKS 408
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
KR++ A L +++E L P ++ LI +RR+ EAMNLLR M +N P
Sbjct: 409 KRLDQAILLFNQLVES-GLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVT 467
Query: 552 F---VQYISKFGTVEDASEFLKALSVK-EYPSSAAY 583
+ + + + G + +A L + VK P + Y
Sbjct: 468 YSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITY 503
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 129/297 (43%), Gaps = 15/297 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY +T+ N +L+ L + V +E+ G+ ++ +Y + + + +A
Sbjct: 102 GYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEA 161
Query: 321 VKLFEFMM-------DGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V L + DG + K +V S+++ + D G F E +GN +
Sbjct: 162 VNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFY----NEMMGNGVC 217
Query: 373 KS--VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ Y + R L +G+F E ++ M G + ++ +I GLCK G +A +
Sbjct: 218 PNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREM 277
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
DEM G P+I T T L+ G+C VD A F + E + D +V I+G+
Sbjct: 278 FDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCK 337
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
RV A ++ EM + + P T+ +LI+ L A + A +++ M + P
Sbjct: 338 VGRVRDAVRVFDEMCRE-GVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTP 393
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 85/230 (36%), Gaps = 18/230 (7%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
F + K G L + + + L G +A + + N GF + ++Y +I G
Sbjct: 92 FSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILING 151
Query: 418 LCKAGRFEDACNVL-----------DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
LC+ GR +A N+L D G ++ ++I+I C VD +
Sbjct: 152 LCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNGFVDEGFEFY 208
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+MM + LI G + + L+ EMI + L F LI+ L
Sbjct: 209 NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRR-GLDVSVYVFTVLIDGLCK 267
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALS 573
L EA + M + Y P + + G V+ A E A+
Sbjct: 268 NGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIG 317
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 9/331 (2%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ + K+L + ++++ VL VL+ +A GFF W +GY H+ TYN ++ VL
Sbjct: 117 EDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVL 176
Query: 277 ARHESVRDFWNVVEEMKK--EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+ + W +V EM K E + +DT K+ R+ K AV F M+ Y
Sbjct: 177 GKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF-LEMEKSY-- 233
Query: 335 SVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V+ ++ + S+ + + + V K +++ IH K +FD+A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIH-GFCKARKFDDA 292
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
MM MK F PD +TY+ + CK G F +L+EM ENGC P++ T+TI++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+ +V AL + KM E DA LI+ R A ++ +M + +R
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ-GVRR 411
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ T+I L R E A+ LL+ M+ +
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 168/426 (39%), Gaps = 52/426 (12%)
Query: 75 ACDWSDELENKLEELSPKL-------THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
CD+ ++ + E++ +L T V+ VLR+ N +A FF W + +
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 128 SSTVYSLMLRNLVNKDSLKQFWVTLRRMK--EDHCYIEEETYLSILGVLKKAKK------ 179
S Y+ M+ L + W + M E+ + +T ++ L K+ K
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 180 -----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI--------- 219
+D A+N D +VKE ++++ + + + D +
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFC 284
Query: 220 -GKKLEDMKIELSDNFVLTVLKELRIYP--VKAL---GFFRWVGE------HSGYKHNTI 267
+K +D + + V ++ Y V+A G FR V E +G N +
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L + + V + V E+MK++G D Y + K +DA ++FE M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSV--YDGIHRALT 384
+ + V + ++ + + ++ L R+ + E G S S +V Y + +
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMAL--RLLKRMEDEEGESCSPNVETYAPLLKMCC 462
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ ++ M D TY +I GLC +G+ E+AC +E G +P
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 445 TWTILI 450
T +L+
Sbjct: 523 TCKMLV 528
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN--GCIPDIKTWTILIQGHCA 455
A G+ TY+ ++ L K F+ +++EM +N + + T + +++
Sbjct: 156 ANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAK 215
Query: 456 ANEVDRALLCFAKMMEKNYDADADL--LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
+ + ++A+ F +M EK+Y D ++ L++ + + + A+++ +++ + ++ P
Sbjct: 216 SGKYNKAVDAFLEM-EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK--PD 272
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
TF LI AR+ ++A ++ LMK + P FV+ K G +E L+
Sbjct: 273 ARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLE 332
Query: 571 AL 572
+
Sbjct: 333 EM 334
>gi|255566203|ref|XP_002524089.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536657|gb|EEF38299.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1072
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 172/385 (44%), Gaps = 6/385 (1%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
LE ++ + VL +L ++ AL FF W+G +GY H TYN +++ R +
Sbjct: 676 LEKCTLQFTPGLVLEILHNCSMHGNAALKFFSWLGVQTGYCHTKETYNMAMKISGREKDF 735
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ ++ EM+++G + DT+ + Q+ + + E ++K F M D Y P+ L
Sbjct: 736 KHMRSLFYEMRRKGCLITPDTWAIMIMQYGRTGLTEISLKTFTEMKDNGYIPNDSTYKYL 795
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
L S+ + ++ ++ + V L + GR EA K ++
Sbjct: 796 LISLCGKKGRKVDEAIKIFHEMIRTRYIPDREVVGTYLSCLCEAGRLSEARKSTDSLCRI 855
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G+ ++YS I LC++GR E+A ++LDE+ D T+ L+ G + A
Sbjct: 856 GYTIP-LSYSLYIRALCRSGRLEEALSLLDEVGTERSTLDQYTYGTLVHGLLRKGRQEEA 914
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L M E + + LI F +K++ A ++ E +++ P T+ LI
Sbjct: 915 LAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIF-EKMQQDGCEPTVVTYSALIR 973
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYP 578
+ R ++A ++L +K + P + + +IS K G E+A + L + L P
Sbjct: 974 GYMNMERADDAWSVLNHLKLKGPKPDFKTYSMFISCLCKAGKSEEALQLLSRMLEDGIVP 1033
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLL 603
S+ + VF EG++ A+ ++
Sbjct: 1034 STINFRTVFFGLNCEGKNDLARTVM 1058
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 95/432 (21%), Positives = 173/432 (40%), Gaps = 39/432 (9%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
+ EI + V + + +V + + ++LE++ V VLK P A FF
Sbjct: 138 LNEIDVSPVVREITGIVRAENDLVAMEERLENLGFYFEPEIVEKVLKRCFKVPHLAFRFF 197
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
WV G+ H T TY +L + + + ++VEEM+K E DI T+ + QF K
Sbjct: 198 SWVKMRDGFCHTTKTYYTMLYIAGEAKEFKVVDDLVEEMEKNSCEKDIKTWSILISQFGK 257
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS---------------------------- 345
+++ A+ FE M +P + +++ S
Sbjct: 258 AKLIGKALLFFEKMKTSGCEPDEKIYKMMVHSLCNAGKGEVALAFYKEMVQKDMRLDLSL 317
Query: 346 -----ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
IS + D+G V VAN L V I ++ G+ EA ++++ +K
Sbjct: 318 YKILLISMAKSGDVGAVHLVANDMSRLSQIPEHDVNVCILKSFCVAGKIREALELIRDLK 377
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
N D ++ GLC+ R DA +++ M++ I D K + I+I G+ ++
Sbjct: 378 NKDILIDYEYLGTLVKGLCRGDRITDAVEIVEIMKKRNLI-DAKIYGIIINGYLRKKDLS 436
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+A+ F +M E L+ + + + ++L EM+E+ +R +
Sbjct: 437 KAIELFQRMKESGIQPITSTYTELMQCLFNLNQYDKGFELFNEMLER-GIRVDSVATMAI 495
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSS 580
+ + + EA + MK + P + + +I + V E LK L Y
Sbjct: 496 VAAHVRQNHISEAWEVFNTMKDKGANPTWKSYSIFIKELCRVSRTDEILKVL----YKMQ 551
Query: 581 AAYLQVFESFFN 592
A+ + + FN
Sbjct: 552 ASKIFINNDIFN 563
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L R + +E MK+ G + Y + F K + +E A+++FE M
Sbjct: 897 TYGTLVHGLLRKGRQEEALAKIESMKEAGINPTVHVYTSLIVHFFKEKQIEKAMQIFEKM 956
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+P+V S L+R ++ D + V N + G Y L K G
Sbjct: 957 QQDGCEPTVVTYSALIRGYMNMERADDA--WSVLNHLKLKGPKPDFKTYSMFISCLCKAG 1014
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ +EA +++ M G P I + V FGL G+ + A V+ +
Sbjct: 1015 KSEEALQLLSRMLEDGIVPSTINFRTVFFGLNCEGKNDLARTVMQQ 1060
>gi|357529169|sp|Q9LMY5.3|PPR41_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g13630
Length = 826
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 53/488 (10%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 189 LKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 248
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 249 VLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVP--------- 297
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY +++ F
Sbjct: 298 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLS 372
M+ A ++ M+D P V ++LL + N D+GLV ++ +E L + +
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-LNSIIP 407
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV + L K GR DEA + MK G PD + YS VI GLCK G+F+ A + D
Sbjct: 408 CSV---MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + +P+ +T L+ G C + A ++ D L +++I+G+
Sbjct: 465 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 524
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +IE + P ATF +LI + + EA +L ++K P +
Sbjct: 525 CIEEALELFKVVIE-TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 583
Query: 553 VQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY---- 604
+ + G + E + + + P++ Y +F+ +H +L
Sbjct: 584 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 643
Query: 605 -KCPHHIR 611
KC +R
Sbjct: 644 EKCKQGLR 651
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 123/331 (37%), Gaps = 52/331 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ T+ +L L + + + ++++ + G +DI Y + + K +E+A++LF
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESL 367
+ +++ PSV + L+ N P + + + Y +
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593
Query: 368 GNSLS----------------KSVYDGIHRALTKLGR------------FDEAEKMMKAM 399
GN+ S Y I + L + + F++ ++ ++ M
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ G PD ITY+ +I LC+ A L+ M+ T+ ILI C +
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 713
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQAT 516
+A + E+N LI + A KL +++ + V +R + A
Sbjct: 714 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 773
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L + L + E+ LM Q P
Sbjct: 774 INRLCRRHL----VNESKFFFCLMLSQGISP 800
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 165/357 (46%), Gaps = 20/357 (5%)
Query: 196 EIAMDNVAKTLVDV--VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
EI D + + ++ +L + + I K L ++S VL VLK L AL FF
Sbjct: 75 EIFTDKIIEDTRNICRLLSKNPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFF 134
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+W + G+ +NT +YN ++ L + + WN+V +MK++G + +T+ ISR++ +
Sbjct: 135 KWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRKGV-LTKETFALISRRYAR 193
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI-------SSINNPDLGLVFRVANKYES 366
+++A+ FE M K D + LL ++ S+ N D + R +S
Sbjct: 194 SGKVKEAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKS 253
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
L G + L KL +++ + MK+ GFEPD +TY +I CK +++D
Sbjct: 254 YTILLEGW---GQEKNLLKL------DEVYREMKDEGFEPDVVTYGILINAYCKVRKYDD 304
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + EME C P + LI G + + AL F + + + + ++
Sbjct: 305 AIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVG 364
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ R++ AY+++ EM K + P T+ ++ L+ A + EA ++ M +
Sbjct: 365 AYCWSMRIDDAYRMVDEM-RKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSE 420
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/500 (24%), Positives = 218/500 (43%), Gaps = 61/500 (12%)
Query: 55 NTCQKIFFSTSPNSSLE-LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKAS 113
N C+ S +PNSS+E L+L + ++SP L V+ VL++L N A
Sbjct: 87 NICR--LLSKNPNSSIEKLLLGASF---------KVSPAL----VLEVLKRLSNAGALAL 131
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
+FF W +K F ++ Y+ ++ +L W + MK GV
Sbjct: 132 SFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKRK-------------GV 178
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
L K A L + G VKE AM+ K +K G K+E +
Sbjct: 179 LTKETFA--LISRRYARSGKVKE-AMNTFEKM-----------EKFGLKIESTDF---NR 221
Query: 234 FVLTVLKELRIYPVK----ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ T++K ++ + + R+V + Y TI G + +++ V
Sbjct: 222 LLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSY---TILLEG----WGQEKNLLKLDEVY 274
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
EMK EG+E D+ TY + + K R +DA++LF M +PS L+ + S+
Sbjct: 275 REMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSV 334
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
L F + ++ G + Y+ + A R D+A +M+ M+ +G P++
Sbjct: 335 RRLSEALEF--FRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSR 392
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TY ++ L KA + +A +V ++M E C P + T+ I+++ C ++V+ A+ + +
Sbjct: 393 TYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDR 452
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M K + +LIN + +++ A K EM++ V +RP A F L + L+
Sbjct: 453 MKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLD-VGIRPPAALFSHLKQALIEDG 511
Query: 529 RLEEAMNLLRLMKKQNYPPF 548
R + + L + + K P+
Sbjct: 512 RKDTVVLLAQKIDKLRKTPY 531
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 109/421 (25%), Positives = 183/421 (43%), Gaps = 54/421 (12%)
Query: 188 QFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV 247
FH + A+ N T++D V + I LE LS + V ++K P
Sbjct: 21 HFHTYSAVDFAISNEVLTIIDSV------NPIEPALESKVPFLSPSIVTYIIKN---PPN 71
Query: 248 KALGF--FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
LGF F W + + + +++N I+ +L + +W V++E+K+ G+ + D +
Sbjct: 72 SLLGFRFFIWASKFRRLR-SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFT 130
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ + + K M+E AV+ FE M D KP V + +L + L L
Sbjct: 131 VLIQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLAL--------- 181
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
GI+ + KL P+ T+S +I G+CK+G+ +
Sbjct: 182 ------------GIYNRMLKLNCL----------------PNIATFSILIDGMCKSGKTQ 213
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A + DEM + +P+ T+TI+I G C A + D A F M + D+ + L+
Sbjct: 214 NALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCIPDSVTYNALL 273
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+GF RV+ A LL + EK R + + LI+ L ARR E+A R M + N
Sbjct: 274 HGFCKLGRVDEALGLL-KYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTEHNI 332
Query: 546 PP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKD 601
P ++ +SK G +DA L ++ + P + Y + + + + G EAK
Sbjct: 333 KPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKS 392
Query: 602 L 602
L
Sbjct: 393 L 393
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 124/578 (21%), Positives = 235/578 (40%), Gaps = 43/578 (7%)
Query: 53 HINTCQKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKA 112
H +T + F+ S N L +I D + +E LE P L+ V Y+++ N P
Sbjct: 21 HFHTYSAVDFAIS-NEVLTII---DSVNPIEPALESKVPFLSPSIVTYIIK---NPPNSL 73
Query: 113 SAF--FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI 170
F F W ++ R S +++++ L+ + + +W L+ +K I + + +
Sbjct: 74 LGFRFFIWASKFRRLR-SWVSHNMIIDMLIKDNGFELYWQVLKEIKRCGFSISADAFTVL 132
Query: 171 LGVLKKA---KKASDLAALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLED 225
+ K +KA + + + D + V +V +VVL + +G
Sbjct: 133 IQAYAKMDMIEKAVESFEMMKDFDCKPDVFTYNTVLHVMVRKEVVLLA-----LGIYNRM 187
Query: 226 MKIELSDNF-VLTVLKELRIYPVKALGFFRWVGEHSGYK--HNTITYNGILRVLARHESV 282
+K+ N ++L + K + E + + N ITY I+ L + +
Sbjct: 188 LKLNCLPNIATFSILIDGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKA 247
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ + MK G D TY + F K +++A+ L ++ Y Q S L
Sbjct: 248 DVAYRLFIAMKDHGCIPDSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCL 307
Query: 343 LRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
+ + D + +R ++ + + +Y + + L+K G+F +A +++ M
Sbjct: 308 IDGLFRARRFEDAQVWYRKMTEHNIKPDVI---LYTIMMKGLSKAGKFKDALRLLNEMTE 364
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G PD Y+ +I G C G ++A ++ E+ +N C T+TILI G C + V
Sbjct: 365 RGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGD 424
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA----YKLLVEMIEKVRLRPWQ--- 514
A F +M + + LI+GF + A YK+ + + LR Q
Sbjct: 425 AQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGAN 484
Query: 515 -----ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDAS 566
A+ +T++E+L + + +A N+L + + P + + K G + A
Sbjct: 485 RVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAF 544
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K L +K P S Y + + R +A +L
Sbjct: 545 KLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVL 582
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 139/321 (43%), Gaps = 30/321 (9%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ + R V D + EM+K G + T+ + F K +E A LF M
Sbjct: 408 TYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKM 467
Query: 328 MDGPYKPSVQDCSLLLRSISSINNP--------------DLGLVFRVANKYESL---GNS 370
G ++ SL LR N D GL+ + N L G +
Sbjct: 468 EIG------RNPSLFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFA 521
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ Y+ + K G + A K+ K ++ G PD++TY +I GL A R EDA V
Sbjct: 522 PNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTV 581
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
LD++ +NGC P + + + C N++ A + K + D+++L + F
Sbjct: 582 LDQILKNGCTPITEVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENF-E 640
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---P 546
+ V A + L+EM +L +Q A + + L A RLEEA+ + +++ N P
Sbjct: 641 KGEVEEAVRGLLEM--DFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTP 698
Query: 547 PFPEPFVQYISKFGTVEDASE 567
P + + K G ++ A+E
Sbjct: 699 PSCVKLIYRLLKVGNLDLAAE 719
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 101/251 (40%), Gaps = 14/251 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG+ N ITYN ++ + ++ + + +E++ +G D TY + ED
Sbjct: 518 SGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREED 577
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A + + ++ P + + +S S + L F + KY V
Sbjct: 578 AFTVLDQILKNGCTPITE----VYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLK 633
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT---YSQVIFGLCKAGRFEDACNVLDEM 434
+ K E E+ ++ + F+ ++ Y+ + GLC+AGR E+A + +
Sbjct: 634 SVEENFEK----GEVEEAVRGLLEMDFKLNDFQLAPYTIWLIGLCQAGRLEEALKIFFTL 689
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL-SQKR 493
EE+ + + LI +D A F ++K Y + + L+ L S+ +
Sbjct: 690 EEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFLYTIDKGYMLMPRICNRLLKSLLRSEDK 749
Query: 494 VNGAYKLLVEM 504
N A+ LL M
Sbjct: 750 RNRAFDLLSRM 760
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 164/365 (44%), Gaps = 23/365 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TY ++ AR + + + ++EEM++ G ++ TY + K M+ A
Sbjct: 52 GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAA 111
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ + M++G + P+V + L+ N D + + LG ++K +
Sbjct: 112 QDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVD--------DARKLLGIMVAKGMRPNVV 163
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K +F EA+++++ MK +G PD TYS +I GLCKA + E+A +L M
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+GC PD+ ++ +I C + ++ A +M ++ D + +I+G ++
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A +L +M E + P T+ T+I L + L EA LL M K P +
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343
Query: 555 YI---SKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK----- 605
I K G +E+A L+ + P+ Y + + EA+ ++ +
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403
Query: 606 CPHHI 610
CP ++
Sbjct: 404 CPPNL 408
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 131/283 (46%), Gaps = 4/283 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + TY+ ++ L + + + + ++ M G D+ Y I F K + +
Sbjct: 191 SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLE 250
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDG 378
A K + M P V + ++ + + V + ++ + G+ L V Y
Sbjct: 251 AQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQV--ILDQMQESGDVLPDVVTYST 308
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K EA+K++ M AG PD +TY+ +I GLCK GR E+A +L M+ G
Sbjct: 309 VINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAG 368
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P++ T+T LI G C A +VD A +M + + ++NG R+ A
Sbjct: 369 CAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQ 428
Query: 499 KLLVEMIE-KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+L+ M + + P AT++T++ L+ + ++EA LL M
Sbjct: 429 QLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 163/350 (46%), Gaps = 13/350 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + T+ I+ +A + D ++ ++ G + ++ TY + F + + +E+
Sbjct: 19 AGFAPDAFTHTPIITAMA---NAGDLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEE 75
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KL E M + P++ ++L+ ++ ++ +G V K G + + ++ +
Sbjct: 76 AMKLLEEMRERGCPPNLVTYNVLVDALCKLSM--VGAAQDVVKKMIEGGFAPNVMTFNSL 133
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D+A K++ M G P+ +TYS +I GLCK+ +F +A VL+EM+ +G
Sbjct: 134 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGV 193
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T++ LI G C A++++ A +M D + +I+ F ++ A K
Sbjct: 194 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 253
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQ 554
L EM K R P T+ T+I+ L ++ EA +L M++ P+ +
Sbjct: 254 TLQEM-RKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESG-DVLPDVVTYSTVIN 311
Query: 555 YISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K + +A + L + P Y + + GR EA+ LL
Sbjct: 312 GLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLL 361
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 120/258 (46%), Gaps = 8/258 (3%)
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
N DL + + +S G + + I A+ G D A M +++ G +P+ +
Sbjct: 2 NAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVV 58
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I +A + E+A +L+EM E GC P++ T+ +L+ C + V A KM
Sbjct: 59 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+E + + + L++GF + V+ A KLL M+ K +RP T+ LI+ L +++
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK-GMRPNVVTYSALIDGLCKSQK 177
Query: 530 LEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQ 585
EA +L MK P + + K +E+A + L+ ++ P Y
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237
Query: 586 VFESFFNEGRHYEAKDLL 603
+ +F G+ EA+ L
Sbjct: 238 IIHAFCKSGKLLEAQKTL 255
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 81/189 (42%), Gaps = 8/189 (4%)
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C AG A +L+EM+ G PD T T +I A ++D A+ M D +
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI F K++ A KLL EM E+ P T+ L++ L + A ++++
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRER-GCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
M + + P F + F G V+DA + L + K P+ Y + +
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176
Query: 595 RHYEAKDLL 603
+ EAK++L
Sbjct: 177 KFLEAKEVL 185
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 160/376 (42%), Gaps = 57/376 (15%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
+ + L+ +KI L +VL +++E++I G K N TYNG++ +L +
Sbjct: 191 LSEDLDGIKIALKGEWVLKLIEEMQI---------------KGLKPNPYTYNGVILLLCK 235
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
V + V+ EM EG D Y + F K + A +LF+ M
Sbjct: 236 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQK--------- 286
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
R IS PD Y + L + GR EA+K+
Sbjct: 287 -----RKIS----PDF-------------------ITYTAVICGLCQTGRVMEADKLFHE 318
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M EPD +TY+ +I G CK G+ ++A ++ ++M + G P+I T+T L G C E
Sbjct: 319 MVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGE 378
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
VD A +M K + + + L+NG ++ A KL+ +M E P T+
Sbjct: 379 VDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDM-EVAGFHPDAVTYT 437
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
TL++ +R + A LLR M + P F ++ F G +ED + LK + K
Sbjct: 438 TLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK 497
Query: 576 E-YPSSAAYLQVFESF 590
P++ Y + + +
Sbjct: 498 GIMPNATTYNSLIKQY 513
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 138/294 (46%), Gaps = 12/294 (4%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISS-INNPDLGL----VFRVANKYESLGNSLSKS 374
A KLF+ M++ SV C+L + +S ++ + L V ++ + + G +
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+G+ L K G+ EAE++++ M + G PD + Y+ +I G CK G A + DEM
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++ PD T+T +I G C V A F +M+ K + D LI+G+ + ++
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ----NYPPFPE 550
A+ L +M++ + L P T+ L + L ++ A LL M ++ N +
Sbjct: 345 KEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTY-N 402
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
V + K G ++ A + +K + V + P + Y + +++ A +LL
Sbjct: 403 SLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 42/315 (13%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITY ++ L + V + + EM + E D TY + + K M++A L
Sbjct: 294 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 353
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ P++ + L + D L+ + K G L+ Y+ + L
Sbjct: 354 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK----GLELNIYTYNSLVNGLC 409
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQ------------------------------V 414
K G D+A K+MK M+ AGF PD +TY+ V
Sbjct: 410 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 469
Query: 415 IF-----GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
F G C +G ED +L M E G +P+ T+ LI+ +C N + + M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
K D + ++LI G + + A+ L +M+ K +++ LI+ ++
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK-GFNLTVSSYNALIKGFYKRKK 588
Query: 530 LEEAMNLLRLMKKQN 544
EA L M+++
Sbjct: 589 FLEARELFEQMRREG 603
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 14/250 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TY + L + V ++ EM ++G E++I TY + K ++ A
Sbjct: 358 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 417
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
VKL + M + P + L+ + + +E L L + +
Sbjct: 418 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSR--------EMVRAHELLRQMLDRELQPTVV 469
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + G ++ EK++K M G P+ TY+ +I C + M
Sbjct: 470 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 529
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G +PD T+ ILI+GHC A + A M+ K ++ + LI GF +K+
Sbjct: 530 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 589
Query: 495 NGAYKLLVEM 504
A +L +M
Sbjct: 590 LEARELFEQM 599
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/250 (21%), Positives = 108/250 (43%), Gaps = 6/250 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ ++++M+ G+ D TY + + K R M A
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 452
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRS--ISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+L M+D +P+V ++L+ +S + L+ + K G + + Y+
Sbjct: 453 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK----GIMPNATTYNS 508
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + ++ + M G PD TY+ +I G CKA ++A + +M G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ ++ LI+G + A F +M + AD ++ ++ + + ++
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628
Query: 499 KLLVEMIEKV 508
+L E IEK
Sbjct: 629 ELCDEAIEKC 638
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/339 (26%), Positives = 148/339 (43%), Gaps = 7/339 (2%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ +RD K+ + + DT K+ K + + +E +
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ Y S+ ++L+ S + ++ L V + G S ++ + KLG
Sbjct: 129 EYGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ AM+ +G +PD TYS +I GLCK + EDA + DEM NG +P+ T+T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTT 246
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI GHC VD A+ + +M+ ++ D + LI G + + A L EM K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK- 305
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
L+P + T+ TLI+ LE A + M K+N + IS G DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L+ LSV P Y + F +G + LL
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K MEDA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M++ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ + M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +P+ TY+ +I CK G +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 431 LDEMEENGCIPDIKT 445
L EM+ +G +P + T
Sbjct: 404 LKEMQRDGYVPSVVT 418
>gi|240254074|ref|NP_172820.4| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190928|gb|AEE29049.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 806
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 53/488 (10%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 147 LKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 206
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 207 VLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVP--------- 255
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY +++ F
Sbjct: 256 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLS 372
M+ A ++ M+D P V ++LL + N D+GLV ++ +E L + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-LNSIIP 365
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV + L K GR DEA + MK G PD + YS VI GLCK G+F+ A + D
Sbjct: 366 CSV---MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + +P+ +T L+ G C + A ++ D L +++I+G+
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +IE + P ATF +LI + + EA +L ++K P +
Sbjct: 483 CIEEALELFKVVIE-TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 553 VQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY---- 604
+ + G + E + + + P++ Y +F+ +H +L
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 605 -KCPHHIR 611
KC +R
Sbjct: 602 EKCKQGLR 609
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 146/367 (39%), Gaps = 24/367 (6%)
Query: 261 GYKHNTITYNGI-LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G++ N+I + L L + + + ++ +MK +G D+ Y + K +
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A+ L++ M D P+ + LL + G++ + +SL G +L +Y
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLC-----QKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K G +EA ++ K + G P T++ +I+G CK +A +LD ++
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL-SQKRVN 495
G P + ++T L+ + +M + V+ G K N
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 496 GAYKLLVEMIEKVR----------LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ L + EK + + P Q T+ T+I+ L + L A L +MK +N
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKD 601
+ + + +G + A F+ +L + S AY + ++ +G A
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 602 LLYKCPH 608
L ++ H
Sbjct: 712 LFHQLLH 718
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 116/309 (37%), Gaps = 48/309 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ T+ +L L + + + ++++ + G +DI Y + + K +E+A++LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESL 367
+ +++ PSV + L+ N P + + + Y +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 368 GNSLS----------------KSVYDGIHRALTKLGR------------FDEAEKMMKAM 399
GN+ S Y I + L + + F++ ++ ++ M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ G PD ITY+ +I LC+ A L+ M+ T+ ILI C +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQAT 516
+A + E+N LI + A KL +++ + V +R + A
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 517 FKTLIEKLL 525
L + L
Sbjct: 732 INRLCRRHL 740
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%)
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
ES G + Y+ I + L ++ A ++ MK+ + + TY+ +I LC G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + + ++E +T LI+ HC + + A+ F +++ + ++ +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 485 INGFLSQKRVN 495
IN + +N
Sbjct: 732 INRLCRRHLMN 742
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 153/327 (46%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ ++LS + VL VL + A FF W + G+ H++ TYN ++ +L +
Sbjct: 166 LDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQKPGFAHDSKTYNTMMTILGKTRQF 225
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+++EEM E + ++T+ + F + + AV + E M YK V+ + L
Sbjct: 226 ETMVSLLEEMA-EKELLTMETFTVCFKAFAAAKERKKAVGVLELMKKYKYKVGVETINCL 284
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ L +E L + ++ Y + ++ EA K+ M
Sbjct: 285 LDSLGRAKLGKEALTI-----FEKLHGRFTPNLQTYTVLLNGWCRVRNLMEAGKIWNQMI 339
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ F+PD + ++ ++ GL + + DA + + M+ G PD+K++TIL++ C ++
Sbjct: 340 DEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMK 399
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M DA + LI GF +QKR++ Y LL EM + P T+ L
Sbjct: 400 EAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEM-KANGCPPDGKTYNAL 458
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + R ++A+ + + M + P
Sbjct: 459 IKLMTNKRMPDDAVRIYKKMIENGIKP 485
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 184/462 (39%), Gaps = 38/462 (8%)
Query: 69 SLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCD 121
S E+ C DEL E L+E KL+H+ V+ VL + + A FF W
Sbjct: 142 STEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCWAAQ 201
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K F S Y+ M+ L + L M E + ET+ AK+
Sbjct: 202 KPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAEKE-LLTMETFTVCFKAFAAAKERK 260
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+ + ++ ++ + + +L S K+GK+ + +L F
Sbjct: 261 KAVGVLELMKKYKYKVGVETI-----NCLLDSLGRAKLGKEALTIFEKLHGRFT----PN 311
Query: 242 LRIYPVKALGFFR----------W---VGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
L+ Y V G+ R W + E +K + + +N +L L R + D +
Sbjct: 312 LQTYTVLLNGWCRVRNLMEAGKIWNQMIDED--FKPDIVAHNTMLEGLLRCKKRSDAIKL 369
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
E MK +G D+ +Y + R F K M++AV+ FE M +P + L+
Sbjct: 370 FEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFG- 428
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N + V+ + + ++ G Y+ + + +T D+A ++ K M G +P
Sbjct: 429 -NQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTT 487
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TYS ++ + +E DEM+ GC PD ++T+ I G + A +
Sbjct: 488 HTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEE 547
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
M+EK A LD N F + G +L E+ +K++
Sbjct: 548 MIEKGMKAPQ--LDY--NKFAADFSRAGRPDILEELAQKMKF 585
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 161/368 (43%), Gaps = 10/368 (2%)
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D +L Q + V + DV+ + D + L + L + VL VL
Sbjct: 143 DGGSLEQEDAATSNPEGVGRVCAAIADVI-AAGADANLEAALSALSPPLCEAVVLAVLHR 201
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ + FFRW G+ H TITY +L +L + +++EM K G + +
Sbjct: 202 FKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFESMVALLQEMGKAG-TLSM 260
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
D + + F +++AV +FE M + V+ + LL +++ N LG R
Sbjct: 261 DAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFNCLLVALA---NEGLGREAR-- 315
Query: 362 NKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + S + Y + A EA ++ M G +PD + ++ +I GL
Sbjct: 316 QVFDKMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDVVVHNTMIEGLL 375
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ R +A + + M+ G P++ T+T+LI HC ++D A+ CF +M E D
Sbjct: 376 RGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVA 435
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L+ G+ + KR++ +L EM +K P T+ LI+ L + ++A + +
Sbjct: 436 TYTCLLVGYGNAKRMDRVTAVLEEMTQK-GCPPDARTYNALIKLLTNRKMPDDAARIYKK 494
Query: 540 MKKQNYPP 547
M K+ P
Sbjct: 495 MIKKGLDP 502
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 184/457 (40%), Gaps = 32/457 (7%)
Query: 68 SSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
+++ ++A LE L LSP L V+ VL + + + FF W F
Sbjct: 165 AAIADVIAAGADANLEAALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTH 224
Query: 128 SSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI-----LGVLKKAKKASD 182
++ Y ML L + L+ M + + ++I G +K A +
Sbjct: 225 TTITYCKMLLILGKTRQFESMVALLQEMGKAGTLSMDAFKVAIKSFAAAGEIKNAVGVFE 284
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD----WDDKIGKKLEDMKIELSDNFVLTV 238
L N F DG+ + + + L + LG + +D +G+ D++ +
Sbjct: 285 LMRKNGFDDGVE---SFNCLLVALANEGLGREARQVFDKMLGQYSPDLRSYTALMLAWCN 341
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYN----GILRVLARHESVRDFWNVVEEMKK 294
+ L V+A + + E G K + + +N G+LR +HE+V+ F E MK
Sbjct: 342 ARNL----VEAGRVWNEMLE-KGMKPDVVVHNTMIEGLLRGQRQHEAVKMF----ELMKA 392
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G ++ TY + K M+ A++ FE M + +P V + LL + N +
Sbjct: 393 KGPPPNVWTYTMLICNHCKRGKMDMAMECFEEMQEARCQPDVATYTCLL--VGYGNAKRM 450
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
V V + G Y+ + + LT D+A ++ K M G +P TY+ +
Sbjct: 451 DRVTAVLEEMTQKGCPPDARTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMM 510
Query: 415 IFGLCKAGR-FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ R + C V +EM G PD+ ++T+ I GH + A +M+ K
Sbjct: 511 MKSYFLGDRNYAMGCAVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKG 570
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
A + N F + G +L E+ +KV+
Sbjct: 571 MKAP----QIDCNKFAADLSKAGKLDMLYELAQKVKF 603
>gi|8920567|gb|AAF81289.1|AC027656_6 Contains similarity to a hypothetical protein F23N19.4 gi|6630464
from Arabidopsis thaliana BAC F23N19 gb|AC007190. It
contains a PPR repeat domain PF|01535 [Arabidopsis
thaliana]
Length = 797
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 53/488 (10%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 160 LKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 219
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 220 VLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVP--------- 268
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY +++ F
Sbjct: 269 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 319
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLS 372
M+ A ++ M+D P V ++LL + N D+GLV ++ +E L + +
Sbjct: 320 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-LNSIIP 378
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV + L K GR DEA + MK G PD + YS VI GLCK G+F+ A + D
Sbjct: 379 CSV---MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 435
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + +P+ +T L+ G C + A ++ D L +++I+G+
Sbjct: 436 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 495
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +IE + P ATF +LI + + EA +L ++K P +
Sbjct: 496 CIEEALELFKVVIE-TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 554
Query: 553 VQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY---- 604
+ + G + E + + + P++ Y +F+ +H +L
Sbjct: 555 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 614
Query: 605 -KCPHHIR 611
KC +R
Sbjct: 615 EKCKQGLR 622
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 123/331 (37%), Gaps = 52/331 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ T+ +L L + + + ++++ + G +DI Y + + K +E+A++LF
Sbjct: 445 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 504
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESL 367
+ +++ PSV + L+ N P + + + Y +
Sbjct: 505 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 564
Query: 368 GNSLS----------------KSVYDGIHRALTKLGR------------FDEAEKMMKAM 399
GN+ S Y I + L + + F++ ++ ++ M
Sbjct: 565 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 624
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ G PD ITY+ +I LC+ A L+ M+ T+ ILI C +
Sbjct: 625 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 684
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQAT 516
+A + E+N LI + A KL +++ + V +R + A
Sbjct: 685 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 744
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L + L + E+ LM Q P
Sbjct: 745 INRLCRRHL----VNESKFFFCLMLSQGISP 771
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S + ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQAQDLTDEMSMK-GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + ++ + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ + M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 38/75 (50%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +P+ TY+ +I CK G +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 431 LDEMEENGCIPDIKT 445
L EM+ +G P + T
Sbjct: 404 LKEMQRDGYAPSVVT 418
>gi|357119779|ref|XP_003561611.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18950-like [Brachypodium distachyon]
Length = 547
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 134/287 (46%), Gaps = 5/287 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY +T+ Y I+ L H+ + V E+K GY++D TY + K + D
Sbjct: 233 AGYPPDTVVYQCIIHGLFAHKMGGEALRVFNEIKLRGYDIDAVTYTTVIDGLCKVGNIVD 292
Query: 320 AVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A K+++ M+ +P+ CS L + D + ++V + G S +
Sbjct: 293 ARKMWDEMVHKGMEPNEYAYCSFLGYYCKA---GDFDMAYKVYGEMLGKGFKESTVSCNI 349
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I R DEA + + M G E D TY+ +I GLCK GR +A + + +G
Sbjct: 350 ILAGFCVHMRVDEAISVFEGMVTEGIEHDVFTYNTLIQGLCKVGRLAEAIRMYQRLLSSG 409
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + T+T LI C +VD A+ F M K ++ D +INGF +R + A
Sbjct: 410 LEPTVSTFTPLIDTMCEEGQVDHAVELFRLMQAKGFEPLVRSNDSVINGFCKARRADDAM 469
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
L M+ K L+P + TF +L+E L + R+++A+ +L M K +
Sbjct: 470 AWLAGML-KSNLKPQKQTFNSLLELLSTSERVDDALLILNTMLKSGF 515
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 1/194 (0%)
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
G RV N+ + G + Y + L K+G +A KM M + G EP+ Y
Sbjct: 256 GEALRVFNEIKLRGYDIDAVTYTTVIDGLCKVGNIVDARKMWDEMVHKGMEPNEYAYCSF 315
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ CKAG F+ A V EM G + I++ G C VD A+ F M+ +
Sbjct: 316 LGYYCKAGDFDMAYKVYGEMLGKGFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTEGI 375
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ D + LI G R+ A ++ ++ L P +TF LI+ + +++ A+
Sbjct: 376 EHDVFTYNTLIQGLCKVGRLAEAIRMYQRLLSS-GLEPTVSTFTPLIDTMCEEGQVDHAV 434
Query: 535 NLLRLMKKQNYPPF 548
L RLM+ + + P
Sbjct: 435 ELFRLMQAKGFEPL 448
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 112/294 (38%), Gaps = 42/294 (14%)
Query: 323 LFEFMMDGPYKPSVQD-CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
LF P P D S L R+ ++ P GL R+ G+ S + + +
Sbjct: 155 LFSTFSSSPDFPGDADTVSCLARACAADRRPLDGL--RLLRDAARRGSPPSSAAAADLVK 212
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDN--------------------------------- 408
A G F + + M +AG+ PD
Sbjct: 213 AFAASGNFPKVSDTLHLMISAGYPPDTVVYQCIIHGLFAHKMGGEALRVFNEIKLRGYDI 272
Query: 409 --ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+TY+ VI GLCK G DA + DEM G P+ + + +C A + D A +
Sbjct: 273 DAVTYTTVIDGLCKVGNIVDARKMWDEMVHKGMEPNEYAYCSFLGYYCKAGDFDMAYKVY 332
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M+ K + ++++ GF RV+ A + M+ + + T+ TLI+ L
Sbjct: 333 GEMLGKGFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTE-GIEHDVFTYNTLIQGLCK 391
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVKEY 577
RL EA+ + + + P P + + + G V+ A E + + K +
Sbjct: 392 VGRLAEAIRMYQRLLSSGLEPTVSTFTPLIDTMCEEGQVDHAVELFRLMQAKGF 445
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 97/226 (42%), Gaps = 37/226 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K +T++ N IL H V + +V E M EG E D+ TY + + K + +A
Sbjct: 339 GFKESTVSCNIILAGFCVHMRVDEAISVFEGMVTEGIEHDVFTYNTLIQGLCKVGRLAEA 398
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+++++ ++ +P+V S + +
Sbjct: 399 IRMYQRLLSSGLEPTV-------------------------------------STFTPLI 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + G+ D A ++ + M+ GFEP + VI G CKA R +DA L M ++
Sbjct: 422 DTMCEEGQVDHAVELFRLMQAKGFEPLVRSNDSVINGFCKARRADDAMAWLAGMLKSNLK 481
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P +T+ L++ + VD ALL M++ + D+ +L++
Sbjct: 482 PQKQTFNSLLELLSTSERVDDALLILNTMLKSGFGLDSLPCTILVD 527
>gi|255660870|gb|ACU25604.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 476
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 168/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 20 AFHFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 79
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E LG
Sbjct: 80 DSYGKEGIVQESVKMFQ-------------------------------------KMEELG 102
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ ++ M + G EP T++ +I+G +G+ E A
Sbjct: 103 VERTIKSYNALFKVILRRGRYMMGKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAI 162
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 163 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 222
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + +P T+ TL+ L A ++ EA +L+ +M K P
Sbjct: 223 VSVDQVDDALRLVEEM-KGFGTKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPT 281
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
F++ IS K G ++ A++ LKA+ P+ A Y + E+F G++ +A LL
Sbjct: 282 DNSIFMRLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLL 341
Query: 604 YK 605
K
Sbjct: 342 DK 343
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +GC+P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 9/350 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + YN I+ L++ + + + E++ G + D T+ + K M +
Sbjct: 413 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 472
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A K F+ M+D P+ ++L+ N L +FR + L + + S +
Sbjct: 473 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF-- 530
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
IH L K GR EA K+ +K G PD TYS +I G CK G E A + DEM G
Sbjct: 531 IH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+I + L+ G C + ++ RA F M EK + D+ +I+G+ + V A+
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYI 556
L EM K ++P + L+ +E+AMNL R M ++ + +
Sbjct: 650 SLFHEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 708
Query: 557 SKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K +++AS+ + + K+ P Y V + G+ EA +LL+K
Sbjct: 709 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA-NLLFK 757
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 139/317 (43%), Gaps = 7/317 (2%)
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
N + M ++G + TY I+ + + M +A FE M KP CS L+
Sbjct: 195 NSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ D+ V R+ + S G ++ Y+ + L K G+ ++A +++K M G +P
Sbjct: 255 --MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKP 312
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
++ T+ +I G C+ A +LDEME+ +P ++ +I G C ++ A
Sbjct: 313 NSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLL 372
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
KM + + LI G+ S+ R+ A +LL M + P + +I L
Sbjct: 373 EKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAIISCLSK 431
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFL-KALSVKEYPSSAA 582
A ++EEA L ++ + P F +I SK G + +A+++ + L P++
Sbjct: 432 AGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPL 491
Query: 583 YLQVFESFFNEGRHYEA 599
Y + F G EA
Sbjct: 492 YTVLINGHFKAGNLMEA 508
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 166/379 (43%), Gaps = 17/379 (4%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
++ F+ +LK R+ +AL F + E G + TY+ ++ + V +
Sbjct: 524 VQTCSAFIHGLLKNGRVQ--EALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFE 580
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ +EM +G +I Y + K ++ A KLF+ M + +P S ++
Sbjct: 581 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 640
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
N + F + ++ S G VY+ + K G ++A + + M GF
Sbjct: 641 KSEN--VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-AT 697
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++++ +I G CK+ + ++A + EM +PD T+T +I HC A +++ A L F
Sbjct: 698 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI------ 521
+M E+N D L+ G+ + + + L +M+ K ++P + T+ +I
Sbjct: 758 EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAK-GVKPDEVTYGLVIYAHCKE 816
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS-VKEYPSS 580
+ L+ A +L + + ++ K + + + K + +AS+ L + + PS
Sbjct: 817 DNLVEAFKLRDEVVGKGMLTKGT---IHDLLITALCKREDLTEASKLLDEMGELGLKPSL 873
Query: 581 AAYLQVFESFFNEGRHYEA 599
AA + SF G+ EA
Sbjct: 874 AACSTLVRSFHEAGKMDEA 892
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 144/349 (41%), Gaps = 12/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L + ++ + + M ++G E D TY + + K + +A
Sbjct: 589 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 648
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS-KSVYDGI 379
LF M +P + L+ + + + + +LS ++ DG
Sbjct: 649 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 708
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++ + EA ++ + M PD++TY+ VI CKAG+ E+A + EM+E
Sbjct: 709 CKSC----KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 764
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
I D T+T L+ G+ + F KM+ K D ++I + + A+K
Sbjct: 765 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 824
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARR-LEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
L E++ K L + T L+ L R L EA LL M + P +
Sbjct: 825 LRDEVVGKGMLT--KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRS 882
Query: 559 F---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F G +++A+ + + S+ P + + + N+ +A++L+
Sbjct: 883 FHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 931
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 58/279 (20%)
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ + G S S V+D + + ++G DEA + KN D+I S +
Sbjct: 148 FRNYGGS-SPVVFDILIDSYKRMGMLDEAANVFFVAKN-----DSILISLI--------- 192
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM----MEKNYDADAD 479
CN L M E G +P+ T+TI+ G C A ++ A L F +M ++ +Y+A +
Sbjct: 193 ---RCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSA 249
Query: 480 LLD-------------------------------VLINGFLSQKRVNGAYKLLVEMIEKV 508
L+D VLI+G ++ A ++L MI +
Sbjct: 250 LIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMI-TL 308
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---A 565
+P TF LIE + A+ LL M+K+N P + I+ +D A
Sbjct: 309 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 368
Query: 566 SEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
++ L+ ++ P+ Y + + +EGR EA+ LL
Sbjct: 369 NKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLL 407
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 109/287 (37%), Gaps = 52/287 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD------IDTYIKISRQFQKF 314
G + ++ YN ++ + + N+ EM ++G+ ID Y K +
Sbjct: 659 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK----- 713
Query: 315 RMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+++A +LF+ M+ P V +++ + + L+F+ + + ++++
Sbjct: 714 --IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT- 770
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG---------------- 417
Y + KLG+ E + + M G +PD +TY VI+
Sbjct: 771 --YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 828
Query: 418 -------------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
LCK +A +LDEM E G P + + L++ A +
Sbjct: 829 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGK 888
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+D A F + D L L+NG L+ A L+ +++
Sbjct: 889 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 164/377 (43%), Gaps = 25/377 (6%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLAR----HESVRDFWNVVEEMKKEGYEMDI 301
P L FF W G HN + N L +L R E++ F N + + +
Sbjct: 4 PELVLLFFDWARSRVG--HNVFSCNCALDMLCRLNRRQEALALFRNAMARICMP----NK 57
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + R F ++ A++L E M ++ + + L++ + D G V
Sbjct: 58 FTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLC-----DAGRVVEAL 112
Query: 362 NKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ ++ + V Y + AL K G+FDEA+ M++ M G PD +T+S +I GLC
Sbjct: 113 EHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLC 172
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA-NEVDRALLCFAKMMEKNYDADA 478
K G E A VL+++ + G + +IQ C N V+ A ++ K +
Sbjct: 173 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 232
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +++INGF K ++ AYKLL MIEK + P TF LI L A R+ EA LL
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLE 291
Query: 539 LMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
M P + + + K G V+DA E + + + P + + + +
Sbjct: 292 KMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 351
Query: 596 HYEAKDLLYKCPHHIRQ 612
E LY H +R+
Sbjct: 352 RIEEARQLY---HRMRE 365
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 125/530 (23%), Positives = 223/530 (42%), Gaps = 90/530 (16%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F ++ V++ +++ L + + + R M +D C + TY +++ L KA K +
Sbjct: 88 FEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDE-- 144
Query: 185 ALNQFHDGMVKEIAMDNVA------KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
GM++E+ A TL+D + +++ + LED+
Sbjct: 145 -----AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV------------ 187
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
R +G +S TI I R+ ++ SV V+ + +G+
Sbjct: 188 -------------IQRGMG-NSDAAFETI----IQRLCNKYNSVELASKVLGVVIAKGFT 229
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+ + + F K + ++ A KL E M++ P+V ++L+ + N +G
Sbjct: 230 PTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR--VGEAQ 287
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
++ K G S + Y + L K G+ D+A ++ + M+ P+ +T++ +I GL
Sbjct: 288 QLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGL 347
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA-D 477
CKA R E+A + M E GC PDI T+ LI G C + +VD A F + E A +
Sbjct: 348 CKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 407
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A L +G+ + R+ A ++ +++K P AT+ +LI + R E + L+
Sbjct: 408 AVTYSTLFHGYAALGRMADACRIFSMLVDK-GFSPDLATYTSLILEYCKTSRAVEVVELV 466
Query: 538 RLMKKQNYPP----------------FPEPFVQY---ISKFGTVEDA------------- 565
M + +PP E +Q ++ G +DA
Sbjct: 467 EEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARA 526
Query: 566 SEFLKALSVKEY----------PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
S+ KAL+V E PSS+A + ES G+ +AK LL+K
Sbjct: 527 SKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHK 576
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 142/319 (44%), Gaps = 8/319 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G N +TY+ ++ L + V D + + + M++ ++ T+ + K + +E+
Sbjct: 296 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 355
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDG 378
A +L+ M + P + + L+ + D F++ G S + +V Y
Sbjct: 356 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEA--FQLFQTIPESGVSAANAVTYST 413
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ LGR +A ++ + + GF PD TY+ +I CK R + +++EM G
Sbjct: 414 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 473
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + T + ++ G N +RA+ F M + DA + ++++ G + + A
Sbjct: 474 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKAL 533
Query: 499 KLLVEMIEK--VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
+L ++I+K + P + L+E L + ++A LL M ++ + + + +
Sbjct: 534 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLL 593
Query: 557 SKFGTVE---DASEFLKAL 572
S ++ +A++ +A+
Sbjct: 594 SGLSRLQRWDEATQVFEAM 612
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 100/229 (43%), Gaps = 8/229 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ T + +L L + + M G D Y + + + A
Sbjct: 473 GFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKA 532
Query: 321 VKLFEFMMDG---PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ + E ++D + PS L+ S+ + D ++ +K G + + S Y+
Sbjct: 533 LAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAK--QLLHKMSERGFAAAVSSYN 590
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L++L R+DEA ++ +AM +AG P+ T + VI LC A + +DA ++ M +
Sbjct: 591 RLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKL 650
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY---DADADLLDV 483
GC PDI+T LI G+C + D A +M E D DLL+
Sbjct: 651 GCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLEC 699
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + TY ++ + + +VEEM +G+ ++T + + E A
Sbjct: 438 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 497
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDG 378
++LF+ M +L++ ++ + D L ++ +V +K + N S S D
Sbjct: 498 IQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNP-SSSAVDA 556
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ +L ++G+ D+A++++ M GF +Y++++ GL + R+++A V + M G
Sbjct: 557 LVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAG 616
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+I T ++I C+A +VD A +M + D + + LI G+ R + A
Sbjct: 617 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 676
Query: 499 KLLVEMIEKVRLRPWQATFKTL 520
KLL EM E L P T L
Sbjct: 677 KLLEEMTE-AGLEPNDTTHDLL 697
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 160/347 (46%), Gaps = 10/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T+T+N I+ L + +++ M + TY + K + ++ A
Sbjct: 40 GVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRA 99
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + + + P V S+L + D F + + G + + Y+ +
Sbjct: 100 KTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEA--FELVKEMSGNGCTPNLVTYNTLI 157
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K + ++A ++++ + ++GF PD +TY+ ++ GLCK GR + A +++ M + GC
Sbjct: 158 DGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCT 217
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+T L++G C VD A F +M+ K+ ADA L+NG+ R A K+
Sbjct: 218 PSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 277
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
++ +R P+ + L++ RL+E N+ M + P + + + +
Sbjct: 278 ----VDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLC 333
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G V++A FL+++ S P +Y + + F + EA+ +L
Sbjct: 334 KHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVL 380
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 117/502 (23%), Positives = 202/502 (40%), Gaps = 53/502 (10%)
Query: 169 SILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI 228
S+L V+ + N G+ K+ +D AKTLVD + S +
Sbjct: 66 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR-AKTLVDEFVSSGF------------- 111
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG--YKHNTITYNGILRVLARHESVRDFW 286
+ D ++L + + F V E SG N +TYN ++ L + +
Sbjct: 112 -VPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAY 170
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
++E + G+ D+ TY I K ++ A+K+ E M+ PSV + L+ +
Sbjct: 171 ELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Query: 347 SSINNPDLG-LVFRV---------ANKYESLGNSLSKS--------------------VY 376
D +F+ A Y SL N KS VY
Sbjct: 231 CRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVY 290
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K GR DE + + M G P+ TY+ V+ GLCK G+ ++A L+ M
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC+PD+ ++ I+I G A++ A +M++ DA + L+ F ++R +
Sbjct: 351 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP----EPF 552
A +L MI K + P T+ TLI L RL +A L+ M +
Sbjct: 411 AVGILKNMI-KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTI 469
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLLYKCPHHIR 611
+ + K G ++ A + ++ ++ +F + EGR EA LL +
Sbjct: 470 IDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRD 529
Query: 612 QDSKISLLFGSAKSNKVTIPSR 633
+ S +++ G K+ ++ S+
Sbjct: 530 EVSYTTVIIGLCKAEQLDRASK 551
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 124/267 (46%), Gaps = 24/267 (8%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L K + D+A +M+ M + G PD +T++ ++ GLCKAG+FE A ++L M
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E C P T+ LI G C VDRA + + + D +L +G + R++
Sbjct: 73 ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRID 132
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A++L+ EM P T+ TLI+ L A + E+A LL + + P +
Sbjct: 133 EAFELVKEM-SGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTII 191
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIR 611
V + K G ++ A + ++ + + PS Y + E GR EA HHI
Sbjct: 192 VDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEA--------HHIF 243
Query: 612 QD-----------SKISLLFGSAKSNK 627
++ + +SL+ G KS++
Sbjct: 244 KEMVSKDCTADALAYVSLVNGYCKSSR 270
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 39/372 (10%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ + + + NV E+M G +I TY + K +++A E M
Sbjct: 290 YNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMH 349
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P V ++++ + + P +V ++ G Y+ + K R
Sbjct: 350 SAGCVPDVVSYNIIIDGLFKASKPKEA--RQVLDQMIQAGIPPDAVTYNTLMAQFCKEER 407
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI-PDIKTWT 447
FD+A ++K M AG +PDN+TY+ +I GL + R DA ++ EM NGC+ T+
Sbjct: 408 FDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYN 467
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN--------------------- 486
+I C + +ALL M +A+ ++ I+
Sbjct: 468 TIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTL 527
Query: 487 -----------GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
G ++++ A KL EM+ L TF LI+ +RL+EA+
Sbjct: 528 RDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALT 587
Query: 536 LLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFF 591
LL LM ++ P + + + K V+ A E ++V+ SS +Y +
Sbjct: 588 LLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC 647
Query: 592 NEGRHYEAKDLL 603
+GR EA +L
Sbjct: 648 GQGRGKEALQVL 659
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I GLCKA + + A +L EM + G PD T+ ++ G C A + +RA
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
A M E+N + LI+G Q+ V+ A L+ E + P T+ L + L
Sbjct: 68 LAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSS-GFVPDVVTYSILADGLC 126
Query: 526 GARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
R++EA L++ M P + + K E A E L+ L + P
Sbjct: 127 KRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVV 186
Query: 582 AYLQVFESFFNEGR 595
Y + + EGR
Sbjct: 187 TYTIIVDGLCKEGR 200
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 106/243 (43%), Gaps = 8/243 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKLFEF 326
TYN I+ L + ++ +++ M G E + TY I I R ++ R+ E + L E
Sbjct: 465 TYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSE- 523
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVYDGIHRALTK 385
MD + V +++ I L ++A + ++ G ++ ++ + A TK
Sbjct: 524 -MD-TLRDEVSYTTVI---IGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTK 578
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
R DEA +++ M G P ITY+ VI LCK + + A + DEM G + +
Sbjct: 579 TKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 638
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T+LI G C AL +M + + D L Q R A +LL M
Sbjct: 639 YTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRMT 698
Query: 506 EKV 508
K+
Sbjct: 699 TKM 701
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 11/177 (6%)
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M E PD+ T+ ILI G C A++ D+A +M+++ D + +++G +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A+ LL M E+ RP T+ TLI L + ++ A L+ + P V
Sbjct: 61 FERAHSLLAVMAER-NCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVP---DVV 116
Query: 554 QY------ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
Y + K G +++A E +K +S P+ Y + + + +A +LL
Sbjct: 117 TYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELL 173
>gi|334182559|ref|NP_001184987.1| PPR repeat-containing protein [Arabidopsis thaliana]
gi|332190929|gb|AEE29050.1| PPR repeat-containing protein [Arabidopsis thaliana]
Length = 798
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 53/488 (10%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 147 LKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 206
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 207 VLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVP--------- 255
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY +++ F
Sbjct: 256 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 306
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLS 372
M+ A ++ M+D P V ++LL + N D+GLV ++ +E L + +
Sbjct: 307 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-LNSIIP 365
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV + L K GR DEA + MK G PD + YS VI GLCK G+F+ A + D
Sbjct: 366 CSV---MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 422
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + +P+ +T L+ G C + A ++ D L +++I+G+
Sbjct: 423 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 482
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +IE + P ATF +LI + + EA +L ++K P +
Sbjct: 483 CIEEALELFKVVIE-TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 541
Query: 553 VQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY---- 604
+ + G + E + + + P++ Y +F+ +H +L
Sbjct: 542 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 601
Query: 605 -KCPHHIR 611
KC +R
Sbjct: 602 EKCKQGLR 609
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 146/367 (39%), Gaps = 24/367 (6%)
Query: 261 GYKHNTITYNGI-LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G++ N+I + L L + + + ++ +MK +G D+ Y + K +
Sbjct: 357 GFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDM 416
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A+ L++ M D P+ + LL + G++ + +SL G +L +Y
Sbjct: 417 ALWLYDEMCDKRILPNSRTHGALLLGLC-----QKGMLLEARSLLDSLISSGETLDIVLY 471
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K G +EA ++ K + G P T++ +I+G CK +A +LD ++
Sbjct: 472 NIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKL 531
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL-SQKRVN 495
G P + ++T L+ + +M + V+ G K N
Sbjct: 532 YGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Query: 496 GAYKLLVEMIEKVR----------LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ L + EK + + P Q T+ T+I+ L + L A L +MK +N
Sbjct: 592 CNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNL 651
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKD 601
+ + + +G + A F+ +L + S AY + ++ +G A
Sbjct: 652 DASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVK 711
Query: 602 LLYKCPH 608
L ++ H
Sbjct: 712 LFHQLLH 718
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 58/309 (18%), Positives = 116/309 (37%), Gaps = 48/309 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ T+ +L L + + + ++++ + G +DI Y + + K +E+A++LF
Sbjct: 432 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESL 367
+ +++ PSV + L+ N P + + + Y +
Sbjct: 492 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 551
Query: 368 GNSLS----------------KSVYDGIHRALTKLGR------------FDEAEKMMKAM 399
GN+ S Y I + L + + F++ ++ ++ M
Sbjct: 552 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 611
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ G PD ITY+ +I LC+ A L+ M+ T+ ILI C +
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQAT 516
+A + E+N LI + A KL +++ + V +R + A
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 517 FKTLIEKLL 525
L + L
Sbjct: 732 INRLCRRHL 740
Score = 38.9 bits (89), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%)
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
ES G + Y+ I + L ++ A ++ MK+ + + TY+ +I LC G
Sbjct: 612 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 671
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + + ++E +T LI+ HC + + A+ F +++ + ++ +
Sbjct: 672 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 731
Query: 485 INGFLSQKRVN 495
IN + +N
Sbjct: 732 INRLCRRHLMN 742
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 190/410 (46%), Gaps = 14/410 (3%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P+ Y+L + L + ++ + RMK+ C +TY +++ L + K
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355
Query: 182 DLAALNQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDD--KIGKKLEDMKIELSDNFVL 236
A+ +H M+KE + N + ++ +G + KI +E +
Sbjct: 356 --VAIGLYHK-MLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYN 412
Query: 237 TVLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
++K L + KA+ F + + G +TYN ++ +V + +++ MK+
Sbjct: 413 EIIKGLCLGGDIEKAMVLFEKMLK-MGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKE 471
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G E D TY ++ F K+ +E A F+ M++ P+ + L+ S D+
Sbjct: 472 NGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDI 531
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L + + E +G + + Y+ + L+K RF EAEK+ M G P+ ITY+ +
Sbjct: 532 AL--SLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTL 589
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I GLC+ GR + A + +ME+ C+P++ T++ LI G C + D A + +M K
Sbjct: 590 IDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGL 649
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
D LI+GF+ R++ A+ LL M++ + +P T+ L++ L
Sbjct: 650 APDEVTFTSLIDGFVVLGRIDHAFLLLRRMVD-MGCKPNYRTYSVLLKGL 698
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 118/530 (22%), Positives = 231/530 (43%), Gaps = 34/530 (6%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
++L++LSP+L V ++ + D E FF W+ + ++ + + ML LV +D
Sbjct: 64 SELKQLSPQLKAHHVAEIV-AVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLV-RD 121
Query: 144 SLKQFWVTLRRMKEDHCYIEEET--YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ +R + C EEE L + L + N + K M
Sbjct: 122 RVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAK-FEMVE 180
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE---LRIYPVKALGFFRWVGE 258
A+ L +L S + L+ N ++ +L + +R + F++
Sbjct: 181 GARNLYKQMLNSGIQPSL----------LTFNTLINILSKKGKVREAELILSQIFQY--- 227
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ TY ++ R+ ++ + V + M KEG + + TY + ++
Sbjct: 228 --DLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVY 376
+A+ + E M++ +P+V +L + ++ +I + + LV R+ + G + Y
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR----GCRPNVQTY 341
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L++LG+ + A + M G P+ +TY+ +I LC GRF A + ME
Sbjct: 342 TALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEG 401
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+G + + +T+ +I+G C ++++A++ F KM++ + LING+L++ VN
Sbjct: 402 HGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNN 461
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +LL +++++ P + T+ L+ +LE A + M + P P + I
Sbjct: 462 AARLL-DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 557 ---SKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
SK G V+ A LK + + P+ +Y V E R EA+ +
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKI 570
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 157/379 (41%), Gaps = 33/379 (8%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLAR--------------------HESVRDFWNVVEE 291
FF W+ + YKHN + +L L R E +R + + E
Sbjct: 94 FFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNE 153
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+ G+ + + + Q KF M+E A L++ M++ +PS+ + L+ +S
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 352 P-DLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+ L+ +Y+ LS V Y + + D A + M G +P++
Sbjct: 214 VREAELILSQIFQYD-----LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNS 268
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TYS +I GLC GR ++A ++L+EM E G P + T+T+ I CA + A+ A+
Sbjct: 269 VTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M ++ + LI+G ++ A L +M+ K L P T+ LI +L
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML-KEGLVPNTVTYNALINELCVGG 387
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYL 584
R A+ + M+ + + + I G +E A F K L + P+ Y
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ + +G A LL
Sbjct: 448 TLINGYLTKGNVNNAARLL 466
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 139/318 (43%), Gaps = 12/318 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ L + M+ G + TY +I + +E A
Sbjct: 368 GLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKA 427
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ LFE M+ P+V + L+ ++NN R+ + + G + Y+
Sbjct: 428 MVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA-----RLLDLMKENGCEPDEWTYN 482
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +K G+ + A + M G P+ ++Y+ +I G K G+ + A ++L MEE
Sbjct: 483 ELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEM 542
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+++++ +I G N A KM+E+ + LI+G R A
Sbjct: 543 GCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFA 602
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+K+ +M EK + P T+ +LI L + +EA LL+ M+++ P F I
Sbjct: 603 FKIFHDM-EKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLID 661
Query: 558 KF---GTVEDASEFLKAL 572
F G ++ A L+ +
Sbjct: 662 GFVVLGRIDHAFLLLRRM 679
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 8/253 (3%)
Query: 359 RVA---NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
RVA N+ +G S + + L K + A + K M N+G +P +T++ +I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
L K G+ +A +L ++ + PD+ T+T LI GHC +D A F +M+++ D
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
++ LING ++ RV+ A +L EMIEK + P T+ I L EEA+
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPITALCAIEHEEEAIE 324
Query: 536 LLRLMKKQNYPPFPEPFVQYI---SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFF 591
L+ MKK+ P + + I S+ G +E A + K L P++ Y +
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 592 NEGRHYEAKDLLY 604
GR A + +
Sbjct: 385 VGGRFSTALKIFH 397
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 63/316 (19%), Positives = 124/316 (39%), Gaps = 35/316 (11%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
L D EKA F + P+ Y+ ++ + K ++ L MKE+ C +E
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE 224
TY ++ K K L + + + MV E ++ + ++ G D K+
Sbjct: 479 WTYNELVSGFSKWGK---LESASFYFQEMV-ECGLNPNPVSYTALIDGHSKDGKV----- 529
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ L++LK + E G N +YN ++ L++ +
Sbjct: 530 --------DIALSLLKRM---------------EEMGCNPNVESYNAVINGLSKENRFSE 566
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ ++M ++G ++ TY + + + A K+F M P++ S L+
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ D + + + E G + + + + LGR D A +++ M + G
Sbjct: 627 GLCQEGKADEAEI--LLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGC 684
Query: 405 EPDNITYSQVIFGLCK 420
+P+ TYS ++ GL K
Sbjct: 685 KPNYRTYSVLLKGLQK 700
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 157/364 (43%), Gaps = 45/364 (12%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKI 307
A F+ W + SG++ + Y +++VL+R W ++EEM++E + + ++ +
Sbjct: 139 AYRFYSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVIL 198
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R+F RM+ AV++ + M +P LL ++ G V A+ +E +
Sbjct: 199 MRRFASARMVHKAVEVLDEMPKYGCEPDEYVFGCLLDALCKN-----GSVKEAASLFEDM 253
Query: 368 GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
SV + + K G+ EA+ ++ MK+ G EPD + Y+ ++ G +AG+
Sbjct: 254 RYRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMG 313
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA ++L EM C P+ ++T+LIQ C ++ A F +M AD LI
Sbjct: 314 DAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLI 373
Query: 486 NGFLSQKRVNGAYKLLVEMI----------------------------------EKVRLR 511
+GF ++ Y+LL EMI +K+
Sbjct: 374 SGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCA 433
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEF 568
P + + T+I ++E + L M+ P + FV I+ F G + +A E+
Sbjct: 434 PDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEY 493
Query: 569 LKAL 572
K +
Sbjct: 494 FKEM 497
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 67/308 (21%), Positives = 122/308 (39%), Gaps = 48/308 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +Y +++ L +HE + + + EM+ G + D+ TY + F K+ ++ +L
Sbjct: 330 NATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELL 389
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+ + P+ ++ ++ +L + N+ + +G + S+Y+ + R
Sbjct: 390 DEMIQQGHFPNQVIYQHIM--LAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLAC 447
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM---------- 434
KLG E ++ M+++G P T+ +I G + G +AC EM
Sbjct: 448 KLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQ 507
Query: 435 ----------------------------EENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
GC ++ WTI I + V A
Sbjct: 508 YGTLKELMNSLLRAEKLEMAKDAWNCITASKGCQLNVSAWTIWIHALFSKGHVKEACSFC 567
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR--LRPWQATFKTLIEKL 524
MM+K+ + D L++G +K N + E+ EKVR Q TFK + K
Sbjct: 568 IDMMDKDLMPNPDTFAKLMHGL--KKLYNRQFA--AEITEKVRKMAADRQITFK--MYKR 621
Query: 525 LGARRLEE 532
G R L+E
Sbjct: 622 RGERDLKE 629
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 152/317 (47%), Gaps = 8/317 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +T T+ ++R L + + +V ++M EG++ ++ TY + K R + +A
Sbjct: 121 GHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEA 180
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ LF M+ P + + L+ ++ ++ + + K + + N +S ++ +
Sbjct: 181 LNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNI---V 237
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K G+ EA ++ M G EPD +TY+ ++ G C ++A V D M NGC
Sbjct: 238 VDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGC 297
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+ ++ ++ LI G+C +D+A+ F +M + + LI+G R+ A
Sbjct: 298 VCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIA 357
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L EM+ ++ P T+ L++ L RL EAM LL+ ++ N P + + + +
Sbjct: 358 LFNEMVACGQI-PNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGM 416
Query: 557 SKFGTVEDASEFLKALS 573
+ G +E A + L+
Sbjct: 417 CRAGDLEAARDLFSNLA 433
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ++ N ++ L + V + +VV+ M + G E D+ TY + M++AVK+F
Sbjct: 230 NVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF 289
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ +V + L+ I D + +F + E + N+++ Y + L
Sbjct: 290 DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMT---YSTLIHGL 346
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+GR +A + M G P+ +TYS ++ LCK R +A +L +E + PD+
Sbjct: 347 CHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDV 406
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+ + I I G C A +++ A F+ + + D +++I G + ++ A KL E
Sbjct: 407 QVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFRE 466
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E LR T+ T+ + LL + A+ LL M + +
Sbjct: 467 MDENGCLRNG-CTYNTITQGLLQNNKTSRAIQLLEEMLARGF 507
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 122/278 (43%), Gaps = 8/278 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G + + +TY ++ + + V + M + G ++ +Y + + K + ++
Sbjct: 259 QGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRID 318
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ LFE M P+ S L+ + + L + N+ + G + Y
Sbjct: 319 KAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGR--LQDAIALFNEMVACGQIPNLVTYSI 376
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K R EA ++KA++ + +PD Y+ I G+C+AG E A ++ + G
Sbjct: 377 LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+ T I+I+G C +D A F +M E + + + G L + + A
Sbjct: 437 LQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAI 496
Query: 499 KLLVEMIEKVRLRPWQATFKT--LIEKLLGARRLEEAM 534
+LL EM+ R + A T L+ K+L L++++
Sbjct: 497 QLLEEMLA----RGFSADVSTTALLVKMLSDDGLDQSV 530
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 118/271 (43%), Gaps = 9/271 (3%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P V ++++ S +N D L V K LG+ + + + R L +G+ EA
Sbjct: 89 PDVYTLTIVINSFCHLNRVDFAL--SVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEAL 146
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF+P+ +TY ++ GLCK + +A N+ EM G PDI T+ LI
Sbjct: 147 DVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHAL 206
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C E +M++ + L+++++ + +V A+ +V+M+ + + P
Sbjct: 207 CNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD-VVDMMIQGGVEPD 265
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQ----NYPPFPEPFVQYISKFGTVEDASEFL 569
T+ L++ ++EA+ + +M + N + + K ++ A
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSY-NTLINGYCKIQRIDKAMYLF 324
Query: 570 KALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+ + +E P++ Y + + GR +A
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDA 355
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 157/376 (41%), Gaps = 25/376 (6%)
Query: 113 SAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS-IL 171
N +C +Q + ++S M+ ++ D T + C + E +++ +L
Sbjct: 165 GTLMNGLCKDRQLTEALNLFSEMIAKGISPD-----IFTYNSLIHALCNLCEWKHVTTLL 219
Query: 172 GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL--GSDWDDKIGKKLEDMKIE 229
+ K+K ++ +LN D + KE + A +VD+++ G + D L D
Sbjct: 220 NEMVKSKIMPNVVSLNIVVDALCKEGKVTE-AHDVVDMMIQGGVEPDVVTYAALMDGHC- 277
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
LR +A+ F + +G N ++YN ++ + + + +
Sbjct: 278 ------------LRSEMDEAVKVFDMM-VRNGCVCNVVSYNTLINGYCKIQRIDKAMYLF 324
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
EEM ++ + TY + ++DA+ LF M+ P++ S+LL +
Sbjct: 325 EEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCK- 383
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
N L + E VY+ + + G + A + + G +PD
Sbjct: 384 -NHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVW 442
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T++ +I GLCK G ++A + EM+ENGC+ + T+ + QG N+ RA+ +M
Sbjct: 443 THNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEM 502
Query: 470 MEKNYDADADLLDVLI 485
+ + + AD +L+
Sbjct: 503 LARGFSADVSTTALLV 518
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EAE++ M G P+ ITYS +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC P++ T+ LI G+C A +D + +M E AD + LI+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI L P T TL++ L +L++A+ + ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
DAS + P Y + NEG+ EA++L +
Sbjct: 498 L----------------DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 607 PH 608
PH
Sbjct: 538 PH 539
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ + + D ++ EM + G D TY + F + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
+ L + M+ P + C LL + L +F+V K + G
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI GF
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ +L
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G + A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA++L
Sbjct: 343 EAEEL 347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 201/495 (40%), Gaps = 55/495 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
RP+ ++ ++ L + + + L RM ED + TY +I+ G+ KK S L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + M+ V+ + +VV+ S D + K D + + N + T ++E I
Sbjct: 241 LLRK----------MEEVSHIIPNVVIYSAIIDSLCK---DGRHSDAQN-LFTEMQEKGI 286
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+P + TYN ++ D +++EM + D+ TY
Sbjct: 287 FP------------------DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVAN 362
+ F K +A +L++ M+ P+ S ++ N D + + +A
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K S ++ DG A R D+ +++ M G D TY+ +I G G
Sbjct: 389 KGCSPNLITFNTLIDGYCGA----KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA---- 478
A ++L EM +G PDI T L+ G C ++ AL F M + D DA
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 479 -------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
++LI+G +++ + A +L EM + + P T+ ++I+ L RL+
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLD 563
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSA-AYLQVF 587
EA + M +++ P F I+ K G V+D E + + ++A Y+ +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 588 ESFFNEGRHYEAKDL 602
F G A D+
Sbjct: 624 CGFRKVGNINGALDI 638
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 41/213 (19%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P+V + L+ N Y
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G + ITY +I G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
PD T ++ G + E+ RA+ M+EK
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAV----AMLEK 676
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 11/348 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + +N L +L R + + M +G + D+ +Y I + ++A
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEA 173
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDG 378
K++ ++D P + C L+ + S DL LV V G ++ VY+
Sbjct: 174 AKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKG----GVKVNSLVYNA 229
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ ++GR D+A K+ M G PD +TY+ ++ C+ G ++A +++ ME +G
Sbjct: 230 LIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSG 289
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+ ++ L++G C AN VDRA L + M+ D + +I F +R Y
Sbjct: 290 VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGY 349
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
+L EM K +RP TF LI+ L LL M K P F V +
Sbjct: 350 ELFEEMCGK-GIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDH 408
Query: 556 ISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G V+ A S F + P +Y + F R +A L
Sbjct: 409 LCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHL 456
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 4/234 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESV-RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + + +YN +L+ + V R +VE M+ +G D+ +Y + F K R
Sbjct: 286 ERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVSYNTVITAFCKARR 344
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+LFE M +P + ++L+ + + +V ++ ++ + Y
Sbjct: 345 TRKGYELFEEMCGKGIRPDMVTFNILIDAF--LREGSTHVVKKLLDEMTKMRVLPDCIFY 402
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L K G+ D A + + M G PD I+Y+ ++ G CK R DA ++ DEM+
Sbjct: 403 TAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQS 462
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
G PD T+ +++ G ++ A + +MME+ + + L + L+N S
Sbjct: 463 KGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLVNAIQS 516
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 119/281 (42%), Gaps = 33/281 (11%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K N++ YN ++ R V + M + G D+ TY + + M+++
Sbjct: 218 GGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDE 277
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD---LGLVFRVANK-------YESLGN 369
AV+L E M +P + + LL+ N D L +V R+ K Y ++
Sbjct: 278 AVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTVIT 337
Query: 370 SLSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ K+ ++ + A + G +K++ M P
Sbjct: 338 AFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLP 397
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D I Y+ V+ LCK G+ + A +V +M ENG PD+ ++ L+ G C + V A+ F
Sbjct: 398 DCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLF 457
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+M K D +++ G + K+++ A ++ +M+E+
Sbjct: 458 DEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMER 498
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 4/177 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + GF PD ++ + LC+ R E A + M G PD+ ++TI+I C A
Sbjct: 110 MDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKR 169
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
D A + ++++K D L+ G S RV+ AY+L+V +I K ++ +
Sbjct: 170 FDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVI-KGGVKVNSLVYN 228
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
LI+ R+++AM + M + P + + Y + G V++A ++ +
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETM 285
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 403 GFEPDNITYSQVIFGLCKAGR---FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
GF TYS+ I LC A ++L +M+ G +PDI + + C N +
Sbjct: 76 GFSLLPFTYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRL 135
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+ AL F M K D D ++I+ + KR + A K+ +I+K L P
Sbjct: 136 ETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDK-GLSPDYKACVA 194
Query: 520 LIEKLLGARRLEEAMNLL 537
L+ L R++ A L+
Sbjct: 195 LVVGLCSGGRVDLAYELV 212
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EAE++ M G P+ ITYS +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC P++ T+ LI G+C A +D + +M E AD + LI+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI L P T TL++ L +L++A+ + ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
DAS + P Y + NEG+ EA++L +
Sbjct: 498 L----------------DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 607 PH 608
PH
Sbjct: 538 PH 539
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ + + D ++ EM + G D TY + F + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
+ L + M+ P + C LL + L +F+V K + G
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI GF
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ +L
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G + A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA++L
Sbjct: 343 EAEEL 347
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 201/495 (40%), Gaps = 55/495 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
RP+ ++ ++ L + + + L RM ED + TY +I+ G+ KK S L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + M+ V+ + +VV+ S D + K D + + N + T ++E I
Sbjct: 241 LLRK----------MEEVSHIIPNVVIYSAIIDSLCK---DGRHSDAQN-LFTEMQEKGI 286
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+P + TYN ++ D +++EM + D+ TY
Sbjct: 287 FP------------------DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVAN 362
+ F K +A +L++ M+ P+ S ++ N D + + +A
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K S ++ DG A R D+ +++ M G D TY+ +I G G
Sbjct: 389 KGCSPNLITFNTLIDGYCGA----KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA---- 478
A ++L EM +G PDI T L+ G C ++ AL F M + D DA
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 479 -------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
++LI+G +++ + A +L EM + + P T+ ++I+ L RL+
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLD 563
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSA-AYLQVF 587
EA + M +++ P F I+ K G V+D E + + ++A Y+ +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 588 ESFFNEGRHYEAKDL 602
F G A D+
Sbjct: 624 CGFRKVGNINGALDI 638
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 41/213 (19%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P+V + L+ N Y
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G + ITY +I G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
PD T ++ G + E+ RA+ M+EK
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAV----AMLEK 676
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EAE++ M G P+ ITYS +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC P++ T+ LI G+C A +D + +M E AD + LI+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI L P T TL++ L +L++A+ + ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
DAS + P Y + NEG+ EA++L +
Sbjct: 498 L----------------DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 607 PH 608
PH
Sbjct: 538 PH 539
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ + + D ++ EM + G D TY + F + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
+ L + M+ P + C LL + L +F+V K + G
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI GF
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ +L
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 131/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E ++ + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G + A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA++L
Sbjct: 343 EAEEL 347
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 201/495 (40%), Gaps = 55/495 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
RP+ ++ ++ L + + + L RM ED + TY +I+ G+ KK S L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + M+ V+ + +VV+ S D + K D + + N + T ++E I
Sbjct: 241 LLRK----------MEEVSHIIPNVVIYSAIIDSLCK---DGRHSDAQN-LFTEMQEKGI 286
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+P + TYN ++ D +++EM + D+ TY
Sbjct: 287 FP------------------DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVAN 362
+ F K +A +L++ M+ P+ S ++ N D + + +A
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K S ++ DG A R D+ +++ M G D TY+ +I G G
Sbjct: 389 KGCSPNLITFNTLIDGYCGA----KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA---- 478
A ++L EM +G PDI T L+ G C ++ AL F M + D DA
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 479 -------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
++LI+G +++ + A +L EM + + P T+ ++I+ L RL+
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLD 563
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSA-AYLQVF 587
EA + M +++ P F I+ K G V+D E + + ++A Y+ +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 588 ESFFNEGRHYEAKDL 602
F G A D+
Sbjct: 624 CGFRKVGNINGALDI 638
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 41/213 (19%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P+V + L+ N Y
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G + ITY +I G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
PD T ++ G + E+ RA+ M+EK
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAV----AMLEK 676
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EAE++ M G P+ ITYS +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC P++ T+ LI G+C A +D + +M E AD + LI+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI L P T TL++ L +L++A+ + ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
DAS + P Y + NEG+ EA++L +
Sbjct: 498 L----------------DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 607 PH 608
PH
Sbjct: 538 PH 539
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ + + D ++ EM + G D TY + F + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
+ L + M+ P + C LL + L +F+V K + G
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI GF
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ +L
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 130/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E ++ + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G + A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA++L
Sbjct: 343 EAEEL 347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 113/495 (22%), Positives = 201/495 (40%), Gaps = 55/495 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
RP+ ++ ++ L + + + L RM ED + TY +I+ G+ KK S L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + M+ V+ + +VV+ S D + K D + + N + T ++E I
Sbjct: 241 LLRK----------MEEVSHIIPNVVIYSAIIDSLCK---DGRHSDAQN-LFTEMQEKGI 286
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+P + TYN ++ D +++EM + D+ TY
Sbjct: 287 FP------------------DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVAN 362
+ F K +A +L++ M+ P+ S ++ N D + + +A
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K S ++ DG A R D+ +++ M G D TY+ +I G G
Sbjct: 389 KGCSPNLITFNTLIDGYCGA----KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVG 444
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA---- 478
A ++L EM +G PDI T L+ G C ++ AL F M + D DA
Sbjct: 445 DLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPF 504
Query: 479 -------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
++LI+G +++ + A +L EM + + P T+ ++I+ L RL+
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLD 563
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSA-AYLQVF 587
EA + M +++ P F I+ K G V+D E + + ++A Y+ +
Sbjct: 564 EATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLI 623
Query: 588 ESFFNEGRHYEAKDL 602
F G A D+
Sbjct: 624 CGFRKVGNINGALDI 638
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 41/213 (19%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P+V + L+ N Y
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G + ITY +I G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
PD T ++ G + E+ RA+ M+EK
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAV----AMLEK 676
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 157/357 (43%), Gaps = 44/357 (12%)
Query: 253 FRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
FR E+S G NT++YN IL +L + V++ +++ +M+ G D+ +Y I
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
+ + + +KL E + KP N+Y
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKP---------------------------NQY------ 323
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y+ I L K GR EAE++++ MKN PDN+ Y+ +I G K+G +
Sbjct: 324 ----TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
DEM+ +PD T+T +I G C A +V A F++M+ K D LI+G+
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
+ A+ L +M+EK L P T+ L++ L ++ A LL M ++ P
Sbjct: 440 AGEMKEAFSLHNQMVEK-GLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVC 498
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G +E A + ++ + + +P + Y + +++ G +A +LL
Sbjct: 499 TYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 160/379 (42%), Gaps = 25/379 (6%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
VL V+K RI+P + + Y ++ + +V + + +EMK+
Sbjct: 344 VLRVMKNQRIFP------------------DNVVYTTLISGFGKSGNVSVEYKLFDEMKR 385
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+ D TY + + + +A KLF M+ KP + L+ ++
Sbjct: 386 KKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAG--EM 443
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
F + N+ G + + Y + L K G D A +++ M G +P+ TY+ +
Sbjct: 444 KEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNAL 503
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I GLCK G E A +++EM+ G PD T+T ++ +C E+ +A M++K
Sbjct: 504 INGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGL 563
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+VL+NGF + +L+ M++K + P TF +L+++ + +
Sbjct: 564 QPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDK-GIMPNATTFNSLMKQYCIRNNMRATI 622
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE--FL-KALSVKEYP-SSAAYLQVFESF 590
+ + M Q P + I + E FL K + K + ++A+Y + + F
Sbjct: 623 EIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGF 682
Query: 591 FNEGRHYEAKDLLYKCPHH 609
+ + EA+ L + H
Sbjct: 683 YKRKKFEEARKLFEEMRTH 701
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 105/251 (41%), Gaps = 2/251 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ ++EEM G+ D TY I + K M A
Sbjct: 492 GLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKA 551
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L M+D +P++ ++L+ + G R+ G + + ++ +
Sbjct: 552 HELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGE--RLIKWMLDKGIMPNATTFNSLM 609
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ ++ K M G PD TY+ +I G CKA ++A + EM E G
Sbjct: 610 KQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ LI+G + + A F +M + A+ ++ D+ ++ + +L
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTLEL 729
Query: 501 LVEMIEKVRLR 511
E IEK ++
Sbjct: 730 CDEAIEKCLVK 740
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 159/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A +M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F K L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKKMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 159/361 (44%), Gaps = 10/361 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYES 366
K + + +E ++D Y S+ ++L+ + + LVF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKW-- 165
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +D
Sbjct: 166 -GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDD 224
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI
Sbjct: 225 ANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + A+ L+ EM K L+P + T+ TLI+ LE A + M ++N
Sbjct: 285 GLCKKGDLKQAHDLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIR 343
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ IS G DA + L+ LSV P + Y + F +G + L
Sbjct: 344 LDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKL 403
Query: 603 L 603
L
Sbjct: 404 L 404
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT------------------ 316
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 317 --LIDGCCKEG-----------------DLETAFEHRKRMIQENIRLDDVAYTALISGLC 357
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ GR+ +AEK+++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 358 QEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSV 416
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 165/351 (47%), Gaps = 16/351 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + +EL + VL R LG FF W + Y H+ Y ++++L++
Sbjct: 104 LNESGVELRPGLIERVLN--RCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 161
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+KE ++ + + ++ + ++F M++ A+++ + M ++P
Sbjct: 162 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 221
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V A +E + ++ + + ++G+ EA+ ++
Sbjct: 222 GCLLDALCK-----HGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M AGFEPD + Y+ ++ G AG+ DA ++L +M G P+ +T+LIQ C +
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++ A+ F +M +AD L++GF +++ Y +L +MI+K L P + T+
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK-GLMPSELTY 395
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA 565
++ EE + L+ M++ Y P ++ K G V++A
Sbjct: 396 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 192/479 (40%), Gaps = 25/479 (5%)
Query: 88 ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
EL P L VL + + FF W + ++ S VY M++ L
Sbjct: 110 ELRPGLIER----VLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGA 165
Query: 148 FWVTLRRM-KEDHCYIEEETYLSIL------GVLKKAKKASDLAALNQFHDGMVKEIAMD 200
W + M KE+ IE E ++ ++ ++KKA + D F +
Sbjct: 166 VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD-------E 218
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN---FVLTVLKELRIYPVKALGFFRWVG 257
V L+D + K EDM++ N F + R+ + +
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 278
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+G++ + + Y +L A + D ++++ +M++ G+E + + Y + + K M
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A+K+F M + V + L+ D + V + G S+ Y
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI--VLDDMIKKGLMPSELTYM 396
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I A K F+E ++M+ M+ + PD Y+ VI CK G ++A + +EMEEN
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY--DADADLLDVLINGFLSQKRVN 495
G P + T+ I+I G + + A F +M+ + + L +L+N L K++
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLE 516
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A + + K ++ I L +EA + M + ++ P P+ F +
Sbjct: 517 MAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAK 575
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 194/455 (42%), Gaps = 68/455 (14%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K +P + ++++LR L + L++ L RMKE C ++ Y +++ KAK D
Sbjct: 4 KSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAK---D 60
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+F MVK + V T ++V D K G+ + +K+ L E+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVV-TYTNIV---DGLCKAGRTKDAVKL----------LDEM 106
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
R G N TYN I+ L + + ++EEM GY D+
Sbjct: 107 R---------------DKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVV 151
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL-------------RSISSI 349
TY + K +++A K M P P V + ++ R + +
Sbjct: 152 TYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDQM 208
Query: 350 NN----PDL-------------GLVFRVANKYES---LGNSLSKSVYDGIHRALTKLGRF 389
N PD+ G V R +S LG + Y+ + AL +LG
Sbjct: 209 TNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHI 268
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+AE M+ M+ GF PD ++Y+ I GLCKA R + A V D M E GC P+ ++++L
Sbjct: 269 GKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 328
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
++ C E+D A+ + EK D L VL++G R + A L +++++
Sbjct: 329 VEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKI 388
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
P + +++ R++++A+ + + M ++N
Sbjct: 389 CEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 147/350 (42%), Gaps = 55/350 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G+ + ++YN + L + E V+ V + M + G + +Y + + K + +
Sbjct: 279 ERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKEL 338
Query: 318 EDAVKLFE---------------FMMDGPYKPSVQD--CSLLLRSISS-INNPDLGLVFR 359
+DA+ L E ++DG K D C+L + + I PD+ +
Sbjct: 339 DDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDV-FFYN 397
Query: 360 VANKYESLGNSLSKSVYDGIHR------------------ALTKLGRFDEAEKMMKAMKN 401
V + K++ IH+ L R +AE M+ M +
Sbjct: 398 VMLDSHCKRRQIDKALQ--IHKQMLERNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVD 455
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
GF PD +TY ++ +CK G+ A + +E + GC+PD+ T++ LI G N +
Sbjct: 456 EGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEE 515
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF-KTL 520
A L F K+ D L + +I G+ + KL VE+IE + P TF K +
Sbjct: 516 AYLLFTKL-------DVALWNAMILGYAENGSGDLGLKLFVELIES-DVEPNARTFGKEI 567
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV-----QYISKFGTVEDA 565
KL+ A L +A L K + FP+ FV +K G +E+A
Sbjct: 568 SGKLVKAESLGKARGLFDRAVKGGF--FPDLFVANTLIDVFAKCGDLEEA 615
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + C PD T+ IL++G C +N++++A +M E D + + LI+G+ K
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
A+K L EM+ K P T+ +++ L A R ++A+ LL M+ + P +
Sbjct: 61 FGQAFKFLAEMV-KNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119
Query: 553 --VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
V+ + + +++A + L+ ++V+ Y P Y + R EA+ L + P
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179
Query: 610 IRQDSKISLLFGSAKSNKVTIPSR 633
S +++ G KS + SR
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASR 203
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 173/400 (43%), Gaps = 49/400 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL F+ + + + TYN ++ L + ++ EM+ + ++ TY I
Sbjct: 63 KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K E++ K+ E MM P V + +++ + NN + + Y+ +
Sbjct: 123 IKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNME-----KAREVYQHM 177
Query: 368 GNSLSKS---VYDGIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAG 422
S K Y + L K+G+ DE+ K++ AM+ AG+ P+ IT+S +I GLC+ G
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
E A V M E GC P+ T+T LI G C A +V +A F KM + DA +
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL--LG-------------- 526
LI G+ + ++ A KL EM L+P TF TLI+ LG
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
Query: 527 -------------------ARRLEEAMNLLRLMKKQNY---PPFPEPFVQYISKFGTVED 564
A +L+EA+ + + M+++ + P FV + K G ++
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417
Query: 565 ASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
A +A P+ + + ES GR +A+ L+
Sbjct: 418 AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLM 457
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 15/300 (5%)
Query: 254 RWVGEH---SGYKHNTITYNGILRVLARHESVRDFWNVVEEM--KKEGYEMDIDTYIKIS 308
R V +H SGYK + ++Y+ ++ LA+ + + ++ EM + GY ++ T+ +
Sbjct: 171 REVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLI 230
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ +E A+++F M++ KP+ + L+ + V + +E +
Sbjct: 231 HGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEK-----VIQARELFEKMT 285
Query: 369 NSL---SKSVYDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRF 424
+ Y+ + K G DEAEK+ + M AG +P +T++ +I G CK G+
Sbjct: 286 QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKL 345
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A ++ EM G D T+ ILI G A ++D AL + +M EK + D
Sbjct: 346 GRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSF 405
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ G ++ AY + E K P TF+ L E L+ R+E+A L+ K ++
Sbjct: 406 VGGLCKTGNIDQAYAVF-EATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARD 464
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 138/320 (43%), Gaps = 14/320 (4%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M K + D Y + + K M+ A+++FE M PS+ ++L+ S N
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINS--RCNA 58
Query: 352 PDLGLVFRVANKYESLGNS----LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ G + + ++S+ + Y+ + L G + A K++ M++ +
Sbjct: 59 GEFG---KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAAN 115
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TYS +I L K + E++ VL+EM GC PD+ + ++QG +N +++A +
Sbjct: 116 VFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQ 175
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEKVRLRPWQATFKTLIEKLLG 526
M+E Y D +LI+G +++ + K+L EM + P TF TLI L
Sbjct: 176 HMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCR 235
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEYPSSA-A 582
LE+A+ + M + P + I+ E A E + ++ P A A
Sbjct: 236 TGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVA 295
Query: 583 YLQVFESFFNEGRHYEAKDL 602
Y + + G EA+ L
Sbjct: 296 YNSLIAGYCKRGSMDEAEKL 315
>gi|326531238|dbj|BAK04970.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 660
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/547 (23%), Positives = 222/547 (40%), Gaps = 55/547 (10%)
Query: 85 KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
+LE L +L V V+R L +D E A F+ W + F S +
Sbjct: 77 ELERLDIELDPFVVNLVVRGL-SDSETAVRFYWWAESRPGFDHSQFAIA----------- 124
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ V+L + + + E LG ++ A + G V+ D+V
Sbjct: 125 ---YIVSLLFVDGNFALLSE-----FLGTVRSQGVALHRSLYRILLSGYVRAGKFDSVIG 176
Query: 205 TLVDVVL------GSDWDDKIGKKLEDMKIELSDNFVLTVL-KELRIYPVKALGFFRWVG 257
T ++V+ G D++ IG +++ +L + + L K L + P + RW+
Sbjct: 177 TFDEMVMSGCREFGIDYNRYIGVLIKNCCFDLVEKYYGMALSKGLCLTPFT---YSRWIS 233
Query: 258 ------------------EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ G+ + N + L + + D +VE+M+ +G
Sbjct: 234 ALCQSNRIELVEELLADMDRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIP 293
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ TY + + +AV L+E M+ KP V C L+ + N + F
Sbjct: 294 DVVTYTTVVGCLCNNKRFSEAVGLWEEMVKMGLKPDVVACGALIFGLC--KNSKVEEAFE 351
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+A++ SL LS S+Y+ + + G D+A ++ M+ G EP +TY+ ++ C
Sbjct: 352 LASRMLSLNIELSVSIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYC 411
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
G E A N++ +ME +G PD ++ L++G C +++D+A + ME D
Sbjct: 412 TIGMMEKAENLITKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIV 471
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++LI+ F K+V A +L EM K ++ T+ TLI L A L
Sbjct: 472 SCNILIDAFCKVKKVKSALELFKEMDYK-GMQADAVTYGTLINGLFSVGYYNLAEELFEQ 530
Query: 540 MKKQNYPP---FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGR 595
M K P + ++ K G ++ A + FL + + P Y + R
Sbjct: 531 MLKAQIDPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSR 590
Query: 596 HYEAKDL 602
EA DL
Sbjct: 591 AMEALDL 597
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 104/261 (39%), Gaps = 3/261 (1%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ R S+ + ++ M+ G E + TY + + MME A L M
Sbjct: 368 YNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLITKME 427
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P + LL+ + + D F + + +G + + A K+ +
Sbjct: 428 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAF--VSDHMEVGGFCDIVSCNILIDAFCKVKK 485
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
A ++ K M G + D +TY +I GL G + A + ++M + P++ + I
Sbjct: 486 VKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVNLYNI 545
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
++ C ++ RA F M++K D + LI R A L +M K
Sbjct: 546 MLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDMRTK- 604
Query: 509 RLRPWQATFKTLIEKLLGARR 529
+ P TFK LI LL R
Sbjct: 605 GVEPDSLTFKYLINGLLDEGR 625
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 156/397 (39%), Gaps = 21/397 (5%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
D+ F P ++ + L ++ L + +M+ + TY +++G L K+
Sbjct: 252 DRFGFSPDIWACNIYIDCLCKQNRLHDALQMVEKMRGKGTIPDVVTYTTVVGCLCNNKRF 311
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
S+ L + MVK +V ++ G + K+ + E LS N L+V
Sbjct: 312 SEAVGL---WEEMVKMGLKPDVVACGA-LIFGLCKNSKVEEAFELASRMLSLNIELSV-- 365
Query: 241 ELRIYPVKALGFFRWVG-----------EHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
IY GF+R +G + +TYN +L + N++
Sbjct: 366 --SIYNALISGFWRAGSIDKAYTIISFMRTNGCEPGVVTYNILLNHYCTIGMMEKAENLI 423
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M+ G D +Y ++ + K ++ A M+ + C++L+ + +
Sbjct: 424 TKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDIVSCNILIDAFCKV 483
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
L Y+ G Y + L +G ++ AE++ + M A +P+
Sbjct: 484 KKVKSALELFKEMDYK--GMQADAVTYGTLINGLFSVGYYNLAEELFEQMLKAQIDPNVN 541
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y+ ++ LCK G + A + M + +PDI T+ LI + AL F M
Sbjct: 542 LYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALDLFKDM 601
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
K + D+ LING L + R AY++ M+E
Sbjct: 602 RTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMME 638
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 102/237 (43%), Gaps = 18/237 (7%)
Query: 258 EHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + +YN +L+ L + H+ + F V + M+ G+ DI + + F K +
Sbjct: 427 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGF-CDIVSCNILIDAFCKVKK 485
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-- 374
++ A++LF+ M + L+ + S+ +L E L + K+
Sbjct: 486 VKSALELFKEMDYKGMQADAVTYGTLINGLFSVGYYNLA---------EELFEQMLKAQI 536
Query: 375 -----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+Y+ + L K+G A+K+ M PD +TY+ +I+ L K R +A +
Sbjct: 537 DPNVNLYNIMLHHLCKVGDLKRAQKIFLHMIQKEILPDIVTYNTLIYWLGKNSRAMEALD 596
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ +M G PD T+ LI G A + MME D ++ + LI+
Sbjct: 597 LFKDMRTKGVEPDSLTFKYLINGLLDEGRSTLAYEVWEYMMENGIILDREVSERLIS 653
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 9/350 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + YN I+ L++ + + + E++ G + D T+ + K M +
Sbjct: 502 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 561
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A K F+ M+D P+ ++L+ N L +FR + L + + S +
Sbjct: 562 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF-- 619
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
IH L K GR EA K+ +K G PD TYS +I G CK G E A + DEM G
Sbjct: 620 IH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+I + L+ G C + ++ RA F M EK + D+ +I+G+ + V A+
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYI 556
L EM K ++P + L+ +E+AMNL R M ++ + +
Sbjct: 739 SLFHEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 797
Query: 557 SKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K +++AS+ + + K+ P Y V + G+ EA +LL+K
Sbjct: 798 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA-NLLFK 846
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 113/498 (22%), Positives = 200/498 (40%), Gaps = 18/498 (3%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
D+K P+ +YSL++ + + + R M E TY I L +AK+
Sbjct: 255 DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRM 314
Query: 181 SDLAALNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
++ A F + + D N L+D + D++ +++D+ + L
Sbjct: 315 NE--AKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV-LRIKDVMVSCGIPINLITY 371
Query: 240 KELRIYPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
L I+ + G E G K N+ T+ ++ R ++ +++EM+
Sbjct: 372 NVL-IHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 430
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
K +Y + + + A KL E M KP+V S+L+ + +S +
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
R+ + G + Y+ I L+K G+ +EA + ++ G +PD +T+
Sbjct: 491 EAR--RLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 548
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
I G K G+ +A DEM ++G +P+ +T+LI GH A + AL F ++
Sbjct: 549 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D I+G L RV A K+ E+ EK L P T+ +LI +E+A
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK-GLVPDVFTYSSLISGFCKQGEVEKA 667
Query: 534 MNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
L M + P V + K G ++ A + + K P S Y + +
Sbjct: 668 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727
Query: 590 FFNEGRHYEAKDLLYKCP 607
+ EA L ++ P
Sbjct: 728 YCKSENVAEAFSLFHEMP 745
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 5/227 (2%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L K G + K+ M +A D TY+ ++ LCK G A VL EM+E G
Sbjct: 201 KDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLN 260
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ ++++I+G C ++D A+ M EK + ++ G KR+N A KL
Sbjct: 261 PNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEA-KL 319
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
E ++K L+P LI+ + ++E + + +M P + + +
Sbjct: 320 TFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLC 379
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
KFG +E A+E LK + ++ P+S + + E + E A +LL
Sbjct: 380 KFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELL 426
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 12/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L + ++ + + M ++G E D TY + + K + +A
Sbjct: 678 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 737
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS-KSVYDGI 379
LF M +P + L+ + + + + +LS ++ DG
Sbjct: 738 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 797
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++ + EA ++ + M PD++TY+ VI CKAG+ E+A + EM+E
Sbjct: 798 CKSC----KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 853
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
I D T+T L+ G+ + F KM+ K D ++I + + A+K
Sbjct: 854 IVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFK 913
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARR-LEEAMNLLRLMKKQNYPP---FPEPFVQY 555
L E++ K L + T L+ L R L EA LL M + P V+
Sbjct: 914 LRDEVVGKGMLT--KGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRS 971
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G +++A+ + + S+ P + + + N+ +A++L+
Sbjct: 972 FHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 1020
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 56/287 (19%), Positives = 108/287 (37%), Gaps = 52/287 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD------IDTYIKISRQFQKF 314
G + ++ YN ++ + + N+ EM ++G+ ID Y K +
Sbjct: 748 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCK----- 802
Query: 315 RMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+++A +LF+ M+ P V +++ + + L+F+ + + ++++
Sbjct: 803 --IQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVT- 859
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG---------------- 417
Y + KLG+ E + + M G +PD +TY VI+
Sbjct: 860 --YTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDE 917
Query: 418 -------------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
LCK +A +LDEM E G P + L++ A +
Sbjct: 918 VVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGK 977
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+D A F + D L L+NG L+ A L+ +++
Sbjct: 978 MDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 212/500 (42%), Gaps = 77/500 (15%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
++HES + ++++ + DP+ A FN V ++K F + YS ++ L L
Sbjct: 57 ISHESAINLIKR-EKDPQHALEIFNMVGEQKGFNHNHATYSTLIHKLAQTKKFHAVDALL 115
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
+M + C E +L+++ K+ + + +V+E T +++++
Sbjct: 116 HQMTYETCKFHENIFLNLMKHFYKSSLHERVLEMFYAIQPIVREKPSLKAISTCLNILV- 174
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
E +I+L+ +L V + L++ P NT +N +
Sbjct: 175 -----------ESKQIDLAQKCLLYVNEHLKVRP------------------NTCIFNIL 205
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ + + V+ EMKK ++ TY + +++A++LFE M+
Sbjct: 206 VKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMV--- 262
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
+K + L ++L+ SV + + G+ D
Sbjct: 263 ------------------------------SKDQILPDALTYSV---LIKGFCHGGKADR 289
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A K+M+ M++ G +P+ YS ++ G CK GR E+A V DEM+ +G PD +T LI
Sbjct: 290 ARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLKPDTVGYTTLIN 349
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI-EKVRL 510
C +D A+ +M E ADA +VL+ G + R + A ++L + E V L
Sbjct: 350 CFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRMLENLAYEGVYL 409
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF---PEPFVQYISKFGTVEDASE 567
+ +++ ++ L LE++ LL LM + + P + + + G V++A
Sbjct: 410 N--KGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLVCLCEAGMVDNAVT 467
Query: 568 FLKALSVKEY---PSSAAYL 584
L L+ + P S A+L
Sbjct: 468 ALFGLTQMGFTPEPKSWAHL 487
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/397 (25%), Positives = 168/397 (42%), Gaps = 49/397 (12%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FR + E+ G N +TYN +L L R+ + + + +++EM++ G + D +Y +
Sbjct: 215 AYKLFRQMVEN-GCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLM 273
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
K ++ A+K+FE +G P V S L+ + D +E +
Sbjct: 274 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD-----EACKLFEKMR 328
Query: 368 GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
NS V + + L K R EA+++++ M++ P+ ITYS +I GLCK G+
Sbjct: 329 ENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVR 388
Query: 426 DACNV-----------------------------------LDEMEENGCIPDIKTWTILI 450
DA V ++EM GC+PDI T+ LI
Sbjct: 389 DAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLI 448
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C A F M K + D LI GF +R++ A L +M+++ L
Sbjct: 449 DGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVL 508
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P TF TL+E A +++A LL M + P + + F G + +A
Sbjct: 509 -PDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARR 567
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
LK ++ + P+ Y + ++F G+ A LL
Sbjct: 568 VLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLL 604
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 132/287 (45%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TYN ++ + V + +++EMK+ G ++ TY + F + ++ A
Sbjct: 156 GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTA 215
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M++ P++ + LL + N + + + ++ G K YD +
Sbjct: 216 YKLFRQMVENGCMPNLVTYNTLLSGLC--RNGLMDEAYELLDEMRERGLQPDKFSYDTLM 273
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G+ D A K+ + N PD + YS +I GLCKAGR ++AC + ++M EN C
Sbjct: 274 AGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCE 333
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ G C + + A M ++N + LI+G +V A ++
Sbjct: 334 PDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEV 393
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
MI + + P T+ +LI ++ A+ L+ M P
Sbjct: 394 FKRMIVR-GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 147/348 (42%), Gaps = 9/348 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN ++ V ++EEM G DI TY + K +A
Sbjct: 401 GIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEA 460
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGI 379
+LF M P V S L+ + D+ +F K L + ++ S +
Sbjct: 461 NRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFST---L 517
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
G D+AE++++ M + PD TY+ ++ G CK GR +A VL M + GC
Sbjct: 518 VEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGC 577
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+T LI C A + A +M+ + LI GF + A K
Sbjct: 578 QPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEARK 637
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+L + + ++ +++ L R+ A+ LL +K+ PP + +V I
Sbjct: 638 ILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYVALIRGL 697
Query: 560 GTVED---ASEFLK--ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
++ A E L+ LS K P++ AY V + EGRH EA L
Sbjct: 698 CQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANAL 745
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 163/413 (39%), Gaps = 68/413 (16%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL FF W + G+ HN TYN + L R + + ++++ G ++ TY
Sbjct: 4 PDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYA 63
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRV---- 360
+ + K ++ A +L E M + P + ++ ++ N L FR
Sbjct: 64 VVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECE 123
Query: 361 ---------------AN----------KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
AN K + G ++ Y+ + K+ + A +
Sbjct: 124 KNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLL 183
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+K MK +G P+ +TYS VI G C+ + + A + +M ENGC+P++ T+ L+ G C
Sbjct: 184 LKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCR 243
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV-----------NG-------A 497
+D A +M E+ D D L+ G ++ NG A
Sbjct: 244 NGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVA 303
Query: 498 YKLLV-------------EMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
Y L+ ++ EK+R P TF L++ L RL+EA +L M+
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 542 KQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+N P + + K G V DA E K + V+ P+ Y + F
Sbjct: 364 DRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 206/490 (42%), Gaps = 21/490 (4%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P+ YS ++ + + + R+M E+ C TY ++L G+ +
Sbjct: 194 PNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYEL 253
Query: 186 LNQFH------DGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
L++ D + M + KT +D+ L D+ G D + + +
Sbjct: 254 LDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPD--VVAYSTLIAGL 311
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
K R+ +A F + E+S + + +T+ ++ L + + +++ V+E M+
Sbjct: 312 CKAGRLD--EACKLFEKMRENS-CEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCT 368
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ TY + K + DA ++F+ M+ +P+V + L+ N D L+
Sbjct: 369 PNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLL 428
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ + G Y+ + L K GR EA ++ MK PD ITYS +I G
Sbjct: 429 --MEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK R + A + D+M + +PD+ T++ L++G+C A VD A +M+ + D
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
L++GF R+ A ++L M ++ +P T+ LI+ A + A LL
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKR-GCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA--AYLQVFESFFNE 593
M P + I F G +E+A + L+ L E + AY + +
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRT 665
Query: 594 GRHYEAKDLL 603
GR A +LL
Sbjct: 666 GRMSAALELL 675
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 117/257 (45%), Gaps = 39/257 (15%)
Query: 349 INNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+++PD L F A+K + +++ Y+ + AL + R DE ++K G P+
Sbjct: 1 MSDPDAALRFFHWASKQQGFDHNVY--TYNRLFEALLRARRIDETCHILKNGWPPGITPN 58
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD------------------------- 442
TY+ VI GLCK+G + AC +L+EM E+G +PD
Sbjct: 59 VFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFR 118
Query: 443 -------IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ TWTI+I G C AN + A FAKM +K + +VLINGF +V+
Sbjct: 119 SMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVH 178
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
AY LL EM E L P T+ T+I +++ A L R M + P +
Sbjct: 179 RAYLLLKEMKES-GLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL 237
Query: 556 ISKF---GTVEDASEFL 569
+S G +++A E L
Sbjct: 238 LSGLCRNGLMDEAYELL 254
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 204/473 (43%), Gaps = 31/473 (6%)
Query: 115 FFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
+FN + DK F P S ++ +L +V S Q+W C+ E +L V
Sbjct: 116 YFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWW----------CFFNESKIKVVLDVY 164
Query: 175 KKA---KKASDLAALNQFHDGMV--KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
K + + + D +V +E ++ G +I +K +D+ E
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI-EKAKDLFFE 223
Query: 230 L------SDNFVLTVL-KELRIYPVKALGF--FRWVGEHSGYKHNTITYNGILRVLARHE 280
+ ++ + TVL L +K GF + + EH G N TYN ++ L +
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH-GVFPNLYTYNCVMNQLCKDG 282
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
+D + V +EM++ G +I TY + + +A K+ + M P++ +
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYN 342
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L+ S+ LG + +S G S S Y+ + + G A KM+K M+
Sbjct: 343 TLIDGFCSVGK--LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEME 400
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +P +TY+ +I ++ E A + MEE G +PD+ T+++LI G C +++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A F M+EK + + + + +I G+ + A +L +M EK L P A++ L
Sbjct: 461 EASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEK-ELAPNVASYSYL 519
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS 573
I L R+L+EA +L+ M P + IS+ T ++ + A S
Sbjct: 520 IRVLCKERKLKEAEDLVEKMIDSGIDP-SDTICNLISRAKTDSPVAQIIDASS 571
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 65/409 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDT 303
++L FF W Y H + YN ++ + + VR F W++++ MK E+ I+T
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGK---VRQFDLAWHLIDLMKSRNVEISIET 188
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + R++ + + +AV F M D P S+++ ++S R A++
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK---------RRASE 239
Query: 364 YESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+S +SL VY + R + G EAEK+ K MK AG EP+ TYS VI
Sbjct: 240 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 418 LC-----------------------------------KAGRFEDACNVLDEMEENGCIPD 442
LC KAGR E V ++M++ GC PD
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI+ HC ++ A+ M++K + +A + + ++ VNGA+++
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+M+E + P T+ L+ +G++ + + + + M + P + ++ F
Sbjct: 420 KMME-AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 560 GTVEDASEFLKALSVKE---YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G +A + K + V+E PS + Y V G+ + ++L+ K
Sbjct: 479 GHWNNAYKLFKEM-VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEK 526
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 9/384 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
LE + LS V V++E R P FF W ++ + +T+N ++ +LA+ +
Sbjct: 55 LEKLAPFLSSEIVNDVMREQR-RPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGF 112
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+W ++EE+K ++ T+ + + K M E AV+ F M D KP V + +
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI 172
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
L + + L V N+ L + +++ + + L K G+ D+A KM M
Sbjct: 173 LHVM--VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK 230
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G P+ + Y+ ++ GLC+A R +D +L+ M+ +GC PD T L+ G C ++D A
Sbjct: 231 GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++ Y LI+G KR + + +M K + P + LI
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF-KAGIEPDVVLYTILIR 349
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YP 578
++ A+N+L M ++ P + I F G ++ A +S + +P
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+S Y + G EA+ +
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQI 433
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 124/527 (23%), Positives = 221/527 (41%), Gaps = 65/527 (12%)
Query: 46 QSHTSQFHINTCQKIFFSTSPNSSL--ELILACDWSDELENKLEELSPKLTHESVVYVLR 103
QS H N F+T+ +++ E++ + + +E+ LE+L+P L+ E V V+R
Sbjct: 18 QSRFRCLHAN-----LFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMR 72
Query: 104 KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR---------- 153
+ PE FF W ++ FR S ++L++ L D +W L
Sbjct: 73 E-QRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP 130
Query: 154 -------------------------RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
+MK+ C + TY SIL V+ +K L AL
Sbjct: 131 PPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM--VQKEVFLLAL-A 187
Query: 189 FHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTVLKELRI 244
++ M+K N A L++ + + D K ++M K + + T++
Sbjct: 188 VYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247
Query: 245 YPVKALGFFRWVGEH--SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+ R + SG ++IT N +L + + + + +++ +KEGY + I
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y + + + ++ + M +P V ++L+R + D L + N
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL--NMLN 365
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM-MKAMKNAGFEPDNITYSQVIFGLCKA 421
G S Y+ + + +G D+A + ++ KN F P + TY+ +I G+C+
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF-PTSCTYTILICGMCRN 424
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM-MEKN------Y 474
G ++A + ++ME GC P I T+ LI G C A E++ A F KM + KN
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AD + NGF R A+++L +M+ K P A +K L+
Sbjct: 485 SQGADRVMDTANGFHRVDREEDAFRVLDQMV-KNGCTPSSAVYKCLM 530
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + T+ ++ L + V + ++E M+ +G E DI TY + +EDA
Sbjct: 1185 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDA 1244
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLFE + D K +V ++L+ D FR + G S Y+ +
Sbjct: 1245 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA--FRFFEEMRPKGLKPSTVTYNTLI 1302
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL + GR A+K+ M+ G TY ++ GLCK G E+A ++ +++
Sbjct: 1303 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHK 1362
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I+ ++IL+ G C A +++ A F ++ + + D ++LING ++ ++ A KL
Sbjct: 1363 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 1422
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +M EK L P TF +I+ LL + EA+ LL M+ +N+ P
Sbjct: 1423 LWQMEEKGCL-PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 157/350 (44%), Gaps = 13/350 (3%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + TY I+ L + + ++ EM G D+ Y + +F +++A++
Sbjct: 1082 KGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALE 1141
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA---NKYESLGNSLSKSVYDGI 379
F+ M V + L+ +S GL V N G S + +
Sbjct: 1142 FFKEMEGRGISADVYTYNSLIHGLSRA-----GLWKEVTWFLNLMVDRGFSPDAFTFTIL 1196
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K G+ EA+++++ M++ G EPD +TY+ ++ GLC G+ EDA + + + + G
Sbjct: 1197 IDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 1256
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
++ ++ ILI G+C ++D A F +M K + LI RV A K
Sbjct: 1257 KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQK 1316
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L VEM + +T+ L++ L LEEAM+L + +KK + P E F + +
Sbjct: 1317 LFVEMQTCGQFLKL-STYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGM 1375
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ G +E+A + +S P + AY + N+G EA LL++
Sbjct: 1376 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 1425
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +T+TYN ++ L + VR + EM+ G + + TY + K +E+A
Sbjct: 1290 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 1349
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ + +KP+++ S+LL DG+
Sbjct: 1350 MDLFQSIKKTEHKPNIEVFSILL---------------------------------DGMC 1376
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RA G+ +EA K + G EPD I Y+ +I GLC G +A +L +MEE GC+
Sbjct: 1377 RA----GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
PD T+ ++IQ NE+ A+ +M +N+ D + +L+
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 118/250 (47%), Gaps = 10/250 (4%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + + +TYN ++ L + D + E + G ++++ +Y + + K + ++
Sbjct: 1218 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 1277
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKS 374
+A + FE M KPS + L+ ++ R A K ++ G L S
Sbjct: 1278 EAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR------VRTAQKLFVEMQTCGQFLKLS 1331
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K G +EA + +++K +P+ +S ++ G+C+AG+ E+A DE+
Sbjct: 1332 TYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 1391
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+NG PD + ILI G C + A+ +M EK D+ +V+I L + +
Sbjct: 1392 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 1451
Query: 495 NGAYKLLVEM 504
+ A +LL EM
Sbjct: 1452 HEAIQLLEEM 1461
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 138/341 (40%), Gaps = 13/341 (3%)
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
K G+E D T + + + DAV+LF+ M + +L+ +
Sbjct: 1009 KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTG 1068
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L + K G+ + Y I AL K G EA M M AG PD + YS
Sbjct: 1069 LAIKLHEKMKGNCKGDVFT---YGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSS 1125
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ GLC+ GR ++A EME G D+ T+ LI G A M+++
Sbjct: 1126 LMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRG 1185
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ DA +LI+G + +V A ++L M K + P T+ TL+ L +LE+A
Sbjct: 1186 FSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGK-EPDILTYNTLMNGLCLVGQLEDA 1244
Query: 534 MNLLRLMK----KQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFE 588
L + K N + + K +++A F + + K PS+ Y +
Sbjct: 1245 TKLFESLADRGIKLNVFSY-NILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIG 1303
Query: 589 SFFNEGRHYEAKDL---LYKCPHHIRQDSKISLLFGSAKSN 626
+ GR A+ L + C ++ + LL G K+
Sbjct: 1304 ALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNG 1344
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/291 (21%), Positives = 119/291 (40%), Gaps = 8/291 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+KLF+ + P + LL S++ + VF + K +G
Sbjct: 927 LNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGY--YSTVFPMYRKINDVGIQPDLYTL 984
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L + GFEPD +T + ++ G+ DA + DEM +
Sbjct: 985 NILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTK 1044
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + D KT+ ILI G C A + A+ K M+ N D ++I+
Sbjct: 1045 KGLLGDAKTYGILINGLCKARKTGLAIKLHEK-MKGNCKGDVFTYGMIIDALCKDGMTTE 1103
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
A + EMI + P + +L++ L RL+EA+ + M+ + +
Sbjct: 1104 ALDMFSEMI-GAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLI 1162
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+S+ G ++ + FL + + + P + + + + EG+ EA+ +L
Sbjct: 1163 HGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITYN + L +++ V V++ M +EG++ D+ TY + K +E+A
Sbjct: 189 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 248
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + + L+ ++ + N + L +A + G S ++ +
Sbjct: 249 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL--DLARQVTVKGVSPDVYTFNILI 306
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G A ++ + MKN+G PD +TY+ +I LC G+ A ++L +ME GC
Sbjct: 307 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 366
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I G C ++ A F +M + +A + LI+G K+++ A++L
Sbjct: 367 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 426
Query: 501 LVEMIEKVRLRPWQ-----------------------------------ATFKTLIEKLL 525
+ +MI + L+P T+ TLI L
Sbjct: 427 INQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 485
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
A R + A+ +LR M+ + P P+ P +Q + + + DA S F + V E P +
Sbjct: 486 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 545
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 546 TYKIVFRGLCRGG 558
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ YN +L VL ++ +V EM G + D+ T+ + + + + A
Sbjct: 49 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L++ + + RV + +G S +K + +
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGF--VEEGSIEAALRVKARMLEMGCSATKVTVNVLI 166
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG----------------------- 417
KLGR ++A ++ GFEPD ITY+ + G
Sbjct: 167 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226
Query: 418 ------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
LCK G+ E+A +L++M + GC+PDI T+ LI C N ++ AL
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ K D ++LIN + A +L EM + P + T+ TLI+ L
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLC 345
Query: 526 GARRLEEAMNLLRLMKKQNYP 546
+L +A++LL+ M+ P
Sbjct: 346 SLGKLGKALDLLKDMESTGCP 366
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 6/248 (2%)
Query: 360 VANKYESL-GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ N+ + L G VY+ + L + + E + M G +PD +T++ ++ L
Sbjct: 40 ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKAL 99
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C+A + A +L+EM G PD T+T L+QG ++ AL A+M+E A
Sbjct: 100 CRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATK 159
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
++VLING+ RV A + + I P Q T+ T + L + A+ ++
Sbjct: 160 VTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHALKVMD 218
Query: 539 LMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
+M ++ + P + V + K G +E+A L + + P + + +
Sbjct: 219 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 278
Query: 595 RHYEAKDL 602
R EA DL
Sbjct: 279 RLEEALDL 286
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 177/467 (37%), Gaps = 56/467 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P T ++ +++ V + S++ RM E C + T ++ K + D AL
Sbjct: 122 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED--AL 179
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---------NFVLT 237
+ D + T V G +D +G L+ M + + + N V+
Sbjct: 180 GYIQQEIADGFEPDQI--TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 237
Query: 238 VL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L K ++ K G + + G + T+N ++ L + + ++ ++ +G
Sbjct: 238 CLCKNGQLEEAK--GILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 294
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D+ T+ + K A++LFE M + P + L+ ++ S+ LG
Sbjct: 295 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK--LGK 352
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNA-------- 402
+ ES G S Y+ I L K R +EAE++ M +NA
Sbjct: 353 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 412
Query: 403 ---------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G +P+NITY+ ++ CK G + A ++L+ M NG
Sbjct: 413 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 472
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI G C A AL M K + ++ + + A L
Sbjct: 473 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 532
Query: 502 VEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM E V P T+K + L G ++EA + + M + + P
Sbjct: 533 REMAE-VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 578
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ L + + + D + ++ +M EG + + TY I + K ++ A
Sbjct: 399 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 458
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ E M ++ V L+ + + L +V G + Y+ +
Sbjct: 459 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL--KVLRGMRIKGMRPTPKAYNPVL 516
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEENGC 439
++L + +A + + M G PD +TY V GLC+ G ++A + + EM + G
Sbjct: 517 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 576
Query: 440 IPDIKTWTILIQG 452
IP+ ++ +L +G
Sbjct: 577 IPEFSSFRMLAEG 589
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 150/315 (47%), Gaps = 9/315 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++H+ T+ ++ L R ++ MK+E + + ++ I R + + M D
Sbjct: 44 NGFRHDHTTFGVMISKLVSANEFRPAEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLD 103
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-ESLGNSLSKSVYDG 378
A+++F M D KP+ + + + N + + F KY +G S +
Sbjct: 104 AIRVFHKMNDFGCKPTDKSYISVFAILVEENQLKVAMSFY---KYMREMGVRQSVVSLNV 160
Query: 379 IHRALTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +AL K G D A ++ + M G +PD+ TY +I GLCK G+ +A + EM+
Sbjct: 161 LIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEAKELFKEMDTK 220
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P + T++ L+ G C A VD A+ F KM +K + + L++G A
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL EM+ + R +P T+ TLI L +L EA+ L MK Q P + + I+
Sbjct: 281 MELL-EMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIIN 339
Query: 558 KFGTV---EDASEFL 569
F + ++A+ +L
Sbjct: 340 GFCNIRKFQEAATYL 354
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/465 (23%), Positives = 186/465 (40%), Gaps = 88/465 (18%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQ 147
S ++T V +LR + D KA F+ + FR T + +M+ LV+ + +
Sbjct: 10 SKQITPSKVEQLLRA-ERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRP 68
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
L RMKE+ C I EE +LSI + D A+ FH
Sbjct: 69 AEEMLNRMKEEKCRITEEIFLSICRGYGRVHMPLD--AIRVFH----------------- 109
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL------KELRIYPVKALGFFRWVGEHSG 261
K+ D + +D ++V +L++ A+ F++++ E G
Sbjct: 110 --------------KMNDFGCKPTDKSYISVFAILVEENQLKV----AMSFYKYMREM-G 150
Query: 262 YKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+ + ++ N +++ L ++ D + + EM K G + D TY + K +A
Sbjct: 151 VRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPDSYTYGTLINGLCKLGKTFEA 210
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK--------YESLGNS 370
+LF+ M PSV S L+ + N D +GL ++ K Y SL +
Sbjct: 211 KELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDG 270
Query: 371 LSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L K+ Y + L K G+ EA + + MK G +PD
Sbjct: 271 LCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPD 330
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI-------LIQGHCAANEVD 460
Y ++I G C +F++A LDEM P+ TW++ ++QG C ++
Sbjct: 331 AGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLN 390
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
R+ + M + DA D L+ F + ++ A ++ EM+
Sbjct: 391 RSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMV 435
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 40/232 (17%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TY+ ++ L + +V + + ++MKK+ E ++ TY + K +A
Sbjct: 221 GCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKMKKKAIEPNVFTYSSLMDGLCKNGGSLEA 280
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVAN- 362
++L E M+ +KP++ S L+ + PD GL ++ N
Sbjct: 281 MELLEMMVRKRHKPNMVTYSTLINGLCKEGKLAEAVETLDRMKLQGLKPDAGLYGKIING 340
Query: 363 -----KYESLGNSLSKSVYDGIH-----------------RALTKLGRFDEAEKMMKAMK 400
K++ L + V I + L G + + ++ M+
Sbjct: 341 FCNIRKFQEAATYLDEMVLGQISPNRVTWSLHVKLNNMVVQGLCTNGNLNRSFQLYIGMR 400
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
G D T+ ++ CK G A + DEM +GC+PD W+ ++ G
Sbjct: 401 TRGISIDAGTFDSLVKCFCKKGDLHKAARIFDEMVLDGCVPDHGIWSAVVGG 452
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 170/382 (44%), Gaps = 38/382 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HN T N +L R + + + +M K G+E DI T+ + F + + DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRV--------ANKYESLGNS 370
+ +F+ M++ Y+P+V + ++ + D L L+ R+ A Y SL +
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230
Query: 371 LSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L S ++ + A K GR EAE++ + M +PD
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TYS +I+GLC R ++A + M GC PD+ T++ILI G+C + +V+ + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M ++ + VLI G+ ++N A ++ M+ + P T+ L+ L
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMV-FCGVPPNIITYNVLLHGLCDN 409
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAY 583
++E+A+ +L M+K + ++ + K G V DA + +L++K P Y
Sbjct: 410 GKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTY 469
Query: 584 LQVFESFFNEGRHYEAKDLLYK 605
+ + +G EA L K
Sbjct: 470 TAMMLGLYKKGLRGEADALFRK 491
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 118/290 (40%), Gaps = 38/290 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + + +TYN ++ L D +V M K D+ T+ + K +
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A +L+E M+ P + SLL+
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLI---------------------------------- 298
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
L R DEAE+M M + G PD +TYS +I G CK+ + E + EM +
Sbjct: 299 ---YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQR 355
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + + T+T+LIQG+C A +++ A F M+ + +VL++G ++ A
Sbjct: 356 GVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKA 415
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L +M +K + T+ +I + A + +A +L + + P
Sbjct: 416 LVILADM-QKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTP 464
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 10/193 (5%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG-LCKAGRFEDACNVLDEMEENGCI 440
A++K+ ++D + + M+ G P N+ ++ C+ + A + L +M + G
Sbjct: 90 AISKMKKYDVVIYLWEQMQMLGI-PHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHE 148
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ L+ G C + + AL F +M+E Y+ + + + +I+G K+V+ A L
Sbjct: 149 PDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-----VQY 555
L M E +RP T+ +LI L + R ++A ++ M K+ +P+ F +
Sbjct: 209 LNRM-EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREI--YPDVFTFNALIDA 265
Query: 556 ISKFGTVEDASEF 568
K G + +A E
Sbjct: 266 CVKEGRISEAEEL 278
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 112/245 (45%), Gaps = 11/245 (4%)
Query: 368 GNSLSKSVYDGI--HRALTKLG----RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
G S+ Y G +R + + G + D++ + M P +S+++ + K
Sbjct: 35 GLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKM 94
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+++ + ++M+ G ++ T IL+ C +++ AL KMM+ ++ D
Sbjct: 95 KKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTF 154
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
L+NGF R+ A + M+E + P + T+I+ L +++++ A++LL M+
Sbjct: 155 GSLLNGFCRGDRIYDALYMFDRMVE-MGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRME 213
Query: 542 KQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHY 597
P + IS G +DA+ + ++ +E YP + + ++ EGR
Sbjct: 214 VDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRIS 273
Query: 598 EAKDL 602
EA++L
Sbjct: 274 EAEEL 278
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 84/178 (47%), Gaps = 2/178 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ ++ + + V + EM + G + TY + + + + + A ++F
Sbjct: 325 DVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++M+ P++ ++LL + + LV +A+ +S G Y+ I R +
Sbjct: 385 KWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI-LADMQKS-GMDADIVTYNIIIRGMC 442
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K G +A + ++ G PD TY+ ++ GL K G +A + +M+E+G +P+
Sbjct: 443 KAGEVADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPN 500
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 150/362 (41%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EAE++ M G P+ ITYS +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC P++ T+ LI G+C A +D + +M E AD + LI+
Sbjct: 379 AEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI L P T TL++ L +L++A+ + ++M+K
Sbjct: 439 GFYLVGDLNAALDLLQEMISS-GLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
DAS + P Y + NEG+ EA++L +
Sbjct: 498 L----------------DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 607 PH 608
PH
Sbjct: 538 PH 539
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 125/286 (43%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ + + D ++ EM + G D TY + F + A
Sbjct: 390 GCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
+ L + M+ P + C LL + L +F+V K + G
Sbjct: 450 LDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP 509
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 510 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 569
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI GF
Sbjct: 570 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKV 629
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ +L
Sbjct: 630 GNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVAML 674
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA++L
Sbjct: 343 EAEEL 347
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 80/213 (37%), Gaps = 41/213 (19%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P+V + L+ N Y
Sbjct: 565 ATQMFDSMGSKSFSPNVVTFTTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G + ITY +I G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
PD T ++ G + E+ RA+ M+EK
Sbjct: 648 YPDTITIRNMLTGLWSKEELKRAV----AMLEK 676
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITYN + L +++ V V++ M +EG++ D+ TY + K +E+A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + + L+ ++ + N + L +A + G S ++ +
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL--DLARQVTVKGVSPDVYTFNILI 398
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G A ++ + MKN+G PD +TY+ +I LC G+ A ++L +ME GC
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I G C ++ A F +M + +A + LI+G K+++ A++L
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 501 LVEMIEKVRLRPWQ-----------------------------------ATFKTLIEKLL 525
+ +MI + L+P T+ TLI L
Sbjct: 519 INQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
A R + A+ +LR M+ + P P+ P +Q + + + DA S F + V E P +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 638 TYKIVFRGLCRGG 650
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ YN +L VL ++ +V EM G + D+ T+ + + + + A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L++ + + RV + +G S +K + +
Sbjct: 201 VIMLEEMSSRGVAPDETTFTTLMQGF--VEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG----------------------- 417
KLGR ++A ++ GFEPD ITY+ + G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 418 ------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
LCK G+ E+A +L++M + GC+PDI T+ LI C N ++ AL
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ K D ++LIN + A +L EM + P + T+ TLI+ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLC 437
Query: 526 GARRLEEAMNLLRLMKKQNYP 546
+L +A++LL+ M+ P
Sbjct: 438 SLGKLGKALDLLKDMESTGCP 458
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 43/373 (11%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT L+E + P AL + Y I+R L ++ +V EM++
Sbjct: 44 LLTALRE-QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG+++ + ++ ++ +DAV L
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDL------------------------------- 131
Query: 355 GLVFRVANKYESL-GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+ N+ + L G VY+ + L + + E + M G +PD +T++
Sbjct: 132 -----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ LC+A + A +L+EM G PD T+T L+QG ++ AL A+M+E
Sbjct: 187 LMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
A ++VLING+ RV A + + I P Q T+ T + L + A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 534 MNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFES 589
+ ++ +M ++ + P + V + K G +E+A L + + P + + +
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 590 FFNEGRHYEAKDL 602
R EA DL
Sbjct: 366 LCTGNRLEEALDL 378
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 177/467 (37%), Gaps = 56/467 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P T ++ +++ V + S++ RM E C + T ++ K + D AL
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED--AL 271
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---------NFVLT 237
+ D + T V G +D +G L+ M + + + N V+
Sbjct: 272 GYIQQEIADGFEPDQI--TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 329
Query: 238 VL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L K ++ K G + + G + T+N ++ L + + ++ ++ +G
Sbjct: 330 CLCKNGQLEEAK--GILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D+ T+ + K A++LFE M + P + L+ ++ S+ LG
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK--LGK 444
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNA-------- 402
+ ES G S Y+ I L K R +EAE++ M +NA
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 403 ---------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G +P+NITY+ ++ CK G + A ++L+ M NG
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI G C A AL M K + ++ + + A L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 502 VEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM E V P T+K + L G ++EA + + M + + P
Sbjct: 625 REMAE-VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ L + + + D + ++ +M EG + + TY I + K ++ A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ E M ++ V L+ + + L +V G + Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL--KVLRGMRIKGMRPTPKAYNPVL 608
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEENGC 439
++L + +A + + M G PD +TY V GLC+ G ++A + + EM + G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 440 IPDIKTWTILIQG 452
IP+ ++ +L +G
Sbjct: 669 IPEFSSFRMLAEG 681
>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
Length = 432
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 175/432 (40%), Gaps = 52/432 (12%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL 183
Q SS Y++++R N L + LR M + + T IL L + + +
Sbjct: 20 QLPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQ- 78
Query: 184 AALNQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
AL F + A +V TL++ + K+G+ D +L
Sbjct: 79 -ALEHFDASLELAHAQPDVVSYTTLINGLC------KLGRV--DAAFDL----------- 118
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
FR + G + N TYN ++ L + + + V+ E +K + D+
Sbjct: 119 -----------FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDV 167
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + + +++A+ F M + Y P++ + ++ + R+A
Sbjct: 168 VTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR--------RLA 219
Query: 362 NKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ E + + Y + L K + DEA++++ M + G PD + Y+ ++
Sbjct: 220 DALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLV 279
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G AGR + A +L M GCIPD+ T+T++I C VD A F +++
Sbjct: 280 LGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCS 339
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ LI G+ RV+ K++ EM RP T+ T+I L R EEA
Sbjct: 340 PNVVTYSALIGGYCRASRVDEGGKVMREMA----CRPNVVTYNTMIWGLSMVDRNEEAYG 395
Query: 536 LLRLMKKQNYPP 547
+ R M + + P
Sbjct: 396 MFREMSECGFVP 407
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/345 (22%), Positives = 154/345 (44%), Gaps = 9/345 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+++TYN ++R + ++++ EM EG + + T I + + + A++ F
Sbjct: 24 SSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHF 83
Query: 325 EFMMDGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-VYDGIHRA 382
+ ++ + +P V + L+ + + D F + K + G + Y+ +
Sbjct: 84 DASLELAHAQPDVVSYTTLINGLCKLGRVDAA--FDLFRKMVAAGGCRPNAFTYNALVDG 141
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K R D A ++ + F PD +TY+ ++ L + GR ++A +M E G +P
Sbjct: 142 LCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPT 201
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ ++ +I G C A + AL F +M+++++ + V+I+G +++ A +LL
Sbjct: 202 LVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLD 261
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
M+ + RP + L+ A RL+ A+ LLR M Q P + I K
Sbjct: 262 RMVSE-GCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKV 320
Query: 560 GTVEDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G V+DA E + L K P+ Y + + R E ++
Sbjct: 321 GRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 365
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N +TY+ ++ L + + + + +++ M EG D+ Y + F ++ A+
Sbjct: 233 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 292
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSV--YDG 378
L M+ P V ++++ + + D +FR E + N S +V Y
Sbjct: 293 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR-----ELVANKCSPNVVTYSA 347
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + R DE K+M+ M P+ +TY+ +I+GL R E+A + EM E G
Sbjct: 348 LIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 404
Query: 439 CIPDIKTW 446
+PD +T+
Sbjct: 405 FVPDARTY 412
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 167/384 (43%), Gaps = 9/384 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
LE + LS V V++E R P FF W ++ + +T+N ++ +LA+ +
Sbjct: 55 LEKLAPFLSSEIVNDVMREQR-RPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGF 112
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+W ++EE+K ++ T+ + + K M E AV+ F M D KP V + +
Sbjct: 113 DTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSI 172
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
L + + L V N+ L + +++ + + L K G+ D+A KM M
Sbjct: 173 LHVM--VQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQK 230
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G P+ + Y+ ++ GLC+A R +D +L+ M+ +GC PD T L+ G C ++D A
Sbjct: 231 GIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEA 290
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++ Y LI+G KR + + +M K + P + LI
Sbjct: 291 FALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMF-KAGIEPDVVLYTILIR 349
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YP 578
++ A+N+L M ++ P + I F G ++ A +S + +P
Sbjct: 350 GFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP 409
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+S Y + G EA+ +
Sbjct: 410 TSCTYTILICGMCRNGLLDEARQI 433
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 138/594 (23%), Positives = 240/594 (40%), Gaps = 106/594 (17%)
Query: 46 QSHTSQFHINTCQKIFFSTSPNSSL--ELILACDWSDELENKLEELSPKLTHESVVYVLR 103
QS H N F+T+ +++ E++ + + +E+ LE+L+P L+ E V V+R
Sbjct: 18 QSRFRCLHAN-----LFTTAQGAAISNEVLTVMETVNPMEDALEKLAPFLSSEIVNDVMR 72
Query: 104 KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR---------- 153
+ PE FF W ++ FR S ++L++ L D +W L
Sbjct: 73 E-QRRPELGFRFFIWTTRRRSFR-SWVTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIP 130
Query: 154 -------------------------RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
+MK+ C + TY SIL V+ +K L AL
Sbjct: 131 PPTFSVLIAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVM--VQKEVFLLAL-A 187
Query: 189 FHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTVLKELRI 244
++ M+K N A L++ + + D K ++M K + + T++
Sbjct: 188 VYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLC 247
Query: 245 YPVKALGFFRWVGEH--SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+ R + SG ++IT N +L + + + + +++ +KEGY + I
Sbjct: 248 QAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIK 307
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y + + + ++ + M +P V ++L+R + D L + N
Sbjct: 308 GYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYAL--NMLN 365
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM-MKAMKNAGFEPDNITYSQVIFGLCKA 421
G S Y+ + + +G D+A + ++ KN F P + TY+ +I G+C+
Sbjct: 366 DMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCF-PTSCTYTILICGMCRN 424
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV---------------------- 459
G ++A + ++ME GC P I T+ LI G C A E+
Sbjct: 425 GLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRL 484
Query: 460 ----DRAL-----------LCFAKMMEKNYD-----ADADLL------DVLINGFLSQKR 493
DR + LC + ++ K Y AD+ ++ +VLINGF K
Sbjct: 485 SQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKN 544
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+NGA+KL E+ K P T+ TLI+ R E+A +L M K P
Sbjct: 545 INGAFKLFRELQLKGH-SPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTP 597
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 8/234 (3%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + K + A K+ + ++ G PD++TY +I G + R EDA VLD+M
Sbjct: 531 TYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQM 590
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+NGC P + L+ C ++ A + K + + + L + F + +
Sbjct: 591 VKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHF-EKGEL 649
Query: 495 NGAYKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPE 550
A + L+EM +L ++ A + + L ARR EEA+ + ++K+ PP
Sbjct: 650 EKAVRCLLEM--NFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVLKECQMDVNPPSCV 707
Query: 551 PFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G +E A + FL L Q+ S + + A DLL
Sbjct: 708 MLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKMKHALDLL 761
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 17/252 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + +TYN ++ + +++ + + E++ +G+ D TY + F + ED
Sbjct: 523 SGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREED 582
Query: 320 AVKLFEFMMDGPYKPS--VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A ++ + M+ PS V C + S L + F + KY SL +
Sbjct: 583 AFRVLDQMVKNGCTPSSAVYKCLM----TWSCRKGKLSVAFSLWLKYL---RSLPSQEDE 635
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI---TYSQVIFGLCKAGRFEDACNVLDEM 434
+ A + E EK ++ + F+ +N Y+ + GLC+A R E+A + +
Sbjct: 636 TLKLAEEHFEK-GELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVL 694
Query: 435 EENGCIPDIK--TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+E C D+ + +LI G C ++ A+ F +EK + + + L+ + Q
Sbjct: 695 KE--CQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQD 752
Query: 493 RVNGAYKLLVEM 504
++ A LL M
Sbjct: 753 KMKHALDLLNRM 764
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 170/380 (44%), Gaps = 14/380 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N + YN ++ L + + V + + +++ + + D+ TY + K +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEF 313
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
E +++ + M+ + PS S L+ + + L LV RVA G S + V
Sbjct: 314 EVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAE----FGVSPNIFV 369
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + +L K FDEAE + M G P+++TYS +I C+ G+ + A + L EM
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G P + + LI GHC ++ A A+M+ K + L+ G+ S+ ++N
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L EM K + P TF TL+ L A + +A+ L M + N P +
Sbjct: 490 KALRLYHEMTGK-GIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548
Query: 556 ISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK---DLLYKCPH 608
I + G + A EFL + K P + +Y + G+ EAK D L+K
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 609 HIRQDSKISLLFGSAKSNKV 628
+ + LL G + K+
Sbjct: 609 ELNEICYTGLLHGFCREGKL 628
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 143/348 (41%), Gaps = 30/348 (8%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK---------KEG 296
P L FF ++G H G+ H+T ++ ++ L + FW ++ E
Sbjct: 84 PKLGLRFFNFLGLHRGFDHSTASFCILIHALVQANL---FWPASSLLQTLLLRALKPSEV 140
Query: 297 YEMDIDTYIK-----------ISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLR 344
++ Y K + + + + R + D V +F+ MM P V+ S LL
Sbjct: 141 FDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLH 200
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + GL + + ++G +Y G+ R+L +L A++M+ M+ G
Sbjct: 201 GLVKFRH--FGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGC 258
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ + + Y+ +I GLCK + +A + ++ PD+ T+ L+ G C E + L
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLE 318
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M+ + + L+ G + +V A LV+ + + + P + LI+ L
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALN-LVKRVAEFGVSPNIFVYNALIDSL 377
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFL 569
R +EA L M K P + I F G ++ A FL
Sbjct: 378 CKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFL 425
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 142/348 (40%), Gaps = 13/348 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TY ++ + + EM +G I T+ + + ++ DAVKLF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + KP+ ++++ N + F N+ G Y + L
Sbjct: 531 TEMAEWNVKPNRVTYNVMIEGYCEEGN--MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLC 588
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G+ EA+ + + E + I Y+ ++ G C+ G+ E+A +V +M G D+
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLV 648
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK---LL 501
+ +LI G + DR + F ++++ +D DV+ + K G +K +
Sbjct: 649 CYGVLIDG--SLKHKDRKV--FLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP---FVQYISK 558
+++ P + T+ +I L A + EA L M+ N P F+ ++K
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTK 764
Query: 559 -FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G ++ A E A+ ++A Y + F +GR EA +L+ +
Sbjct: 765 GVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITR 812
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/301 (22%), Positives = 119/301 (39%), Gaps = 39/301 (12%)
Query: 257 GEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
G H G + N I Y G+L R + + +V ++M G ++D+ Y + K +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHK 661
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ + L + M D KP + ++ + S D F + + + G ++
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTG--DFKEAFGIWDLMINEGCVPNEVT 719
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS----------------------- 412
Y + L K G +EAE + M+ P+ +TY
Sbjct: 720 YTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAI 779
Query: 413 ------------QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+I G C+ GR E+A ++ M +G PD T+T +I C N+V
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVK 839
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+A+ + M EK D + LI+G + A +L EM+ + L+P T +T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLKPNTETSETT 898
Query: 521 I 521
I
Sbjct: 899 I 899
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 93/216 (43%), Gaps = 13/216 (6%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++K M + G +PD++ Y+ +I K G F++A + D M GC+P+ T+T +I G C
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 455 AANEVDRALLCFAKMMEKNYDAD----ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
A V+ A + +KM N + LD+L G K+ + +++ L
Sbjct: 729 KAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILK-----GL 783
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
AT+ LI R+EEA L+ M P + IS+ V+ A E
Sbjct: 784 LANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIE 843
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+++ K P AY + G +A +L
Sbjct: 844 LWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATEL 879
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 202/528 (38%), Gaps = 55/528 (10%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP +Y+ ++R+L L + + +M+ C + Y ++ L K +K +
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL----SDNFVLTVLK 240
+ + G KE+ D V + L + ++G ++ D + L S+ V ++++
Sbjct: 283 GIKKDLAG--KELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVE 340
Query: 241 ELRIYPV--KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
LR +AL + V E G N YN ++ L + + + + + M K G
Sbjct: 341 GLRKRGKVEEALNLVKRVAEF-GVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLC 399
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV--------QDC---------SL 341
+ TY + F + ++ A+ M+D KPSV C SL
Sbjct: 400 PNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESL 459
Query: 342 LLRSISSINNPDLGLVFRVANKY--------------ESLGNSLSKSVYD--GIHRALTK 385
+ I+ P + + Y E G + S+Y + L +
Sbjct: 460 MAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFR 519
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G +A K+ M +P+ +TY+ +I G C+ G A L+EM E G +PD +
Sbjct: 520 AGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYS 579
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM- 504
+ LI G C + A + + + N + + L++GF + ++ A + +M
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMG 639
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
+ V L + LI+ L + + + LL+ M + P V Y S
Sbjct: 640 LRGVDLD--LVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKP---DDVIYTSMIDAKSK 694
Query: 565 ASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+F +A + + P+ Y V G EA+ L K
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSK 742
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 142/360 (39%), Gaps = 41/360 (11%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ + KA F N + +K P + Y ++ L + V + + + +C + E
Sbjct: 555 EGNMSKAFEFLNEMIEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLE 224
Y +L + K + AL+ D ++ + +D V L+D L K +
Sbjct: 614 CYTGLLHGFCREGKLEE--ALSVCQDMGLRGVDLDLVCYGVLIDGSL----------KHK 661
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
D K+ L +LKE+ G K + + Y ++ ++ ++
Sbjct: 662 DRKV------FLGLLKEM---------------HDRGLKPDDVIYTSMIDAKSKTGDFKE 700
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ + + M EG + TY + K + +A L M G P+ L
Sbjct: 701 AFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFL- 759
Query: 345 SISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
I +G + + + ++ L + + Y+ + R + GR +EA +++ M
Sbjct: 760 ---DILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGD 816
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD ITY+ +I LC+ + A + + M E G PD + LI G C A E+ +A
Sbjct: 817 GVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKA 876
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 178/394 (45%), Gaps = 29/394 (7%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + +EL + VL R LG FF W + Y H+ Y ++++L++
Sbjct: 105 LNESGVELRPGLIERVLN--RCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 162
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+KE ++ + + ++ + ++F M++ A+++ + M +P
Sbjct: 163 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEPDEYVF 222
Query: 340 SLLLRSI---SSINNP-----DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
LL ++ S+ + D+ L F V +Y + + + + E
Sbjct: 223 GCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRY-----------FTSLLYGWCREEKMME 271
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A+ ++ MK AGFEPD + Y+ ++ G AG+ DA ++L +M G P+ +T+LIQ
Sbjct: 272 AKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQ 331
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C + ++ A+ F +M +AD L++GF +++ Y +L +MI+K L
Sbjct: 332 ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKK-GLM 390
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEF 568
P Q T+ ++ +L E + L+ MK+ Y P ++ K G V++A
Sbjct: 391 PSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 450
Query: 569 LKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
+ P + ++ + ++G EA D
Sbjct: 451 WNEMEGNGLSPGADTFVIIINGLTSQGCLLEACD 484
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 173/433 (39%), Gaps = 46/433 (10%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
+LE L E +L + VL + + FF W + ++ S VY M++ L
Sbjct: 100 KLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILS 159
Query: 141 NKDSLKQFWVTLRRM-KEDHCYIEEETYLSILGVLKKA---KKASD-LAALNQFHDGMVK 195
W + M KE+ IE E ++ ++ A KKA + L + F G+
Sbjct: 160 KMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTF--GLEP 217
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
+ + V L+D + K EDM++ +PV
Sbjct: 218 D---EYVFGCLLDALCKHGSVKDAAKLFEDMRLR---------------FPV-------- 251
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
N + +L R E + + V+ +MK+ G+E DI Y + +
Sbjct: 252 ---------NLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAG 302
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKS 374
M DA L + M ++P+ ++L++++ ++ + + VF +YE + ++
Sbjct: 303 KMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT-- 360
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + K G+ D+ ++ M G P +TY ++ K + + ++++M
Sbjct: 361 -YTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKM 419
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++ PDI + ++I+ C EV A+ + +M AD ++ING SQ +
Sbjct: 420 KQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCL 479
Query: 495 NGAYKLLVEMIEK 507
A EM+ +
Sbjct: 480 LEACDHFKEMVAR 492
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITYN + L +++ V V++ M +EG++ D+ TY + K +E+A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + + L+ ++ + N + L +A + G S ++ +
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL--DLARQVTVKGVSPDVYTFNILI 398
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G A ++ + MKN+G PD +TY+ +I LC G+ A ++L +ME GC
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I G C ++ A F +M + +A + LI+G K+++ A++L
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFEL 518
Query: 501 LVEMIEKVRLRPWQ-----------------------------------ATFKTLIEKLL 525
+ +MI + L+P T+ TLI L
Sbjct: 519 INQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
A R + A+ +LR M+ + P P+ P +Q + + + DA S F + V E P +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 638 TYKIVFRGLCRGG 650
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ YN +L VL ++ +V EM G + D+ T+ + + + + A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L++ + + RV + +G S +K + +
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGF--VEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG----------------------- 417
KLGR ++A ++ GFEPD ITY+ + G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 418 ------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
LCK G+ E+A +L++M + GC+PDI T+ LI C N ++ AL
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ K D ++LIN + A +L EM + P + T+ TLI+ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLC 437
Query: 526 GARRLEEAMNLLRLMKKQNYP 546
+L +A++LL+ M+ P
Sbjct: 438 SLGKLGKALDLLKDMESTGCP 458
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 43/373 (11%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT L+E + P AL + Y I+R L ++ +V EM++
Sbjct: 44 LLTALRE-QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG+++ + ++ ++ +DAV L
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDL------------------------------- 131
Query: 355 GLVFRVANKYESL-GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+ N+ + L G VY+ + L + + E + M G +PD +T++
Sbjct: 132 -----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ LC+A + A +L+EM G PD T+T L+QG ++ AL A+M+E
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
A ++VLING+ RV A + + I P Q T+ T + L + A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 534 MNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFES 589
+ ++ +M ++ + P + V + K G +E+A L + + P + + +
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 590 FFNEGRHYEAKDL 602
R EA DL
Sbjct: 366 LCTGNRLEEALDL 378
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 177/467 (37%), Gaps = 56/467 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P T ++ +++ V + S++ RM E C + T ++ K + D AL
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED--AL 271
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---------NFVLT 237
+ D + T V G +D +G L+ M + + + N V+
Sbjct: 272 GYIQQEIADGFEPDQI--TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 329
Query: 238 VL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L K ++ K G + + G + T+N ++ L + + ++ ++ +G
Sbjct: 330 CLCKNGQLEEAK--GILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D+ T+ + K A++LFE M + P + L+ ++ S+ LG
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK--LGK 444
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNA-------- 402
+ ES G S Y+ I L K R +EAE++ M +NA
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 403 ---------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G +P+NITY+ ++ CK G + A ++L+ M NG
Sbjct: 505 GLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI G C A AL M K + ++ + + A L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 502 VEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM E V P T+K + L G ++EA + + M + + P
Sbjct: 625 REMAE-VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ L + + + D + ++ +M EG + + TY I + K ++ A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ E M ++ V L+ + + L +V G + Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL--KVLRGMRIKGMRPTPKAYNPVL 608
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEENGC 439
++L + +A + + M G PD +TY V GLC+ G ++A + + EM + G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 440 IPDIKTWTILIQG 452
IP+ ++ +L +G
Sbjct: 669 IPEFSSFRMLAEG 681
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 167/371 (45%), Gaps = 9/371 (2%)
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
+I +S++ VL VLK + P++AL +F + E H T T N +L L H+ V D
Sbjct: 84 EIRVSEDEVLGVLKSM-TDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMA 142
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V E M+K+ D+DTY+ I + + + M + + + L+ +
Sbjct: 143 AVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLL 202
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
I + G V + S G S Y + AL K + ++K M++ G P
Sbjct: 203 --IQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRP 260
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ T++ I L +AG+ ++A + M++ GC PD+ T+T+LI C A +++ A F
Sbjct: 261 NVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
KM + D + L++ F ++ +K +E P TF L++ L
Sbjct: 321 VKMKANGHKPDQVIYITLLDKFNDFGDLD-TFKEFWSQMEADGYMPDVVTFTILVDVLCK 379
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL-SVKEYPSSAA 582
AR +EA +M+KQ P + I + G +EDA + L + SV P++
Sbjct: 380 ARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYT 439
Query: 583 YLQVFESFFNE 593
Y +F +F +
Sbjct: 440 Y-NIFIDYFGK 449
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/465 (21%), Positives = 180/465 (38%), Gaps = 44/465 (9%)
Query: 87 EELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLK 146
E L P L S + V D E + D RP+ +++ +R L +
Sbjct: 221 EGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKID 279
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTL 206
+ + RRM ++ C DL D + ++N +
Sbjct: 280 EAYEIFRRMDDEGC-------------------GPDLVTYTVLIDALCNAGQLENAKELF 320
Query: 207 VDVVLGSDWDDKIGKKLEDMKIELSDNFV----LTVLKELRIYPVKALGFFRWVGEHSGY 262
V + D++ + I L D F L KE F E GY
Sbjct: 321 VKMKANGHKPDQV------IYITLLDKFNDFGDLDTFKE-----------FWSQMEADGY 363
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ +T+ ++ VL + + + + M+K+G ++ TY + + +EDA+K
Sbjct: 364 MPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L M +P+ ++ + + + G K ++ G + + +
Sbjct: 424 LLGTMESVGVQPTAYTYNIFIDYFGK--SGETGKAVETFEKMKAKGIVPNIVACNASLYS 481
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L ++GR EA+ M ++ G PD++TY+ ++ K G+ ++A N+L EM NGC PD
Sbjct: 482 LAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPD 541
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI A VD A F +M + + L++G + RV A +L
Sbjct: 542 VIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFE 601
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
MIEK + P +F TL++ +E A+ + M + P
Sbjct: 602 SMIEK-KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKP 645
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 126/275 (45%), Gaps = 7/275 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +YN ++ L W++ ++MK G D T+ + K + +
Sbjct: 783 GISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITEL 842
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--VYDG 378
+L++ M+ KP ++++ S++ NN D L F Y+ + + + Y
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF----YDLVSSDFRPTPRTYGP 898
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K+GR +EA ++ + M + G +P+ ++ +I G K G E AC + M G
Sbjct: 899 LIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEG 958
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+K++TIL+ C A VD AL F ++ D D + +ING +R+ A
Sbjct: 959 IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
L EM + + P T+ +L+ L A +E+A
Sbjct: 1019 ALYNEMRNR-GIVPDLYTYNSLMLNLGLAGMVEQA 1052
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + ITYN ++ LA+ ++ + ++ + TY + K +E+A++
Sbjct: 855 KPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMR 914
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIH 380
LFE M D KP+ ++L+ I + + L R+ N+ G Y +
Sbjct: 915 LFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNE----GIRPDLKSYTILV 970
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L GR DEA +K+ G +PD I Y+++I GL K+ R E+A + +EM G +
Sbjct: 971 DCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIV 1030
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ L+ A V++A + ++ + D + LI G+ + AY +
Sbjct: 1031 PDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTV 1090
Query: 501 LVEMI 505
M+
Sbjct: 1091 YKNMM 1095
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 16/198 (8%)
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
K K G P +Y+ +I L + E A ++ +M+ GC PD T+ +L+ H +
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
++ + +M+ + DA +++I+ ++ A +++ RP T
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSS-DFRPTPRT 895
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE 576
+ LI+ L RLEEAM L M P F I+ +G + D
Sbjct: 896 YGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGD------------ 943
Query: 577 YPSSAAYLQVFESFFNEG 594
+ Q+F+ NEG
Sbjct: 944 ---TETACQLFKRMVNEG 958
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G+ E ++ K M + +PD ITY+ VI L K+ + A + ++ + P +
Sbjct: 835 KSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPR 894
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI G ++ A+ F +M + + + ++LING+ A +L M
Sbjct: 895 TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRM 954
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
+ + +RP ++ L++ L A R++EA+ +K P + + I+ G +
Sbjct: 955 VNE-GIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013
Query: 565 ASEFL 569
E L
Sbjct: 1014 MEEAL 1018
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 98/237 (41%), Gaps = 38/237 (16%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL FF + S ++ TY ++ LA+ + + + EEM G + + + +
Sbjct: 876 KALDFF-YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K E A +LF+ M++ +P ++ ++L+ + D L + N+ +S
Sbjct: 935 INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYY--FNELKST 992
Query: 368 G------------NSLSKS-----------------------VYDGIHRALTKLGRFDEA 392
G N L KS Y+ + L G ++A
Sbjct: 993 GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
++M + ++ AG EPD TY+ +I G + E A V M +GC P+I T+ L
Sbjct: 1053 KRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/526 (23%), Positives = 209/526 (39%), Gaps = 53/526 (10%)
Query: 87 EELSPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
E L P L + SV+ L K D + A + N V K +P + Y+ M+ L
Sbjct: 222 EGLQPNLLIYNSVINALCK-DGNVRDAESIINKVF-KSGMKPDTFTYTSMILGYCRNRDL 279
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT 205
+ RM E+ C TY +++ L + + ++ AL+ F M + + V
Sbjct: 280 DSAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNE--ALD-FISEMTRHGVLPTVHTF 336
Query: 206 LVDVVLGSDWD--DKIGKKLEDMKIELSDNFVLTVLKELRIYPVK--ALGFFRWVGEHSG 261
+V D + K DMK + V T + V A+G F + G
Sbjct: 337 TAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRM-SRDG 395
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
NT+TYN ++ VL + + V M K G + +Y ++ R + E A+
Sbjct: 396 VVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAM 455
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M+ G P++ Y+ I +
Sbjct: 456 SMLTNMLKGRPTPTL-------------------------------------VTYNIIIK 478
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G D A ++++ MK G +PD +Y+++I G CK + E A + +EM + G P
Sbjct: 479 GYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCP 538
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T+T LI G+C ++D A +M + +VLI+G Q +GA +L
Sbjct: 539 NEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 598
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
M+E+ ++ P T+ T+I L + A+ + M K P + +Q + +
Sbjct: 599 KVMLEE-KISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQ 657
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G VE+A E L + P Y+++ E G+ A D L
Sbjct: 658 EGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFL 703
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+TYN I++ V+E MK G + D +Y ++ F K ME A +F
Sbjct: 471 VTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNE 530
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MMD P+ + L+ + L R+ + + G + Y+ + LTK
Sbjct: 531 MMDRGLCPNEVTYTALISGYC--KDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQ 588
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
F AE++ K M PD +TYS VI GLC G A + ++M ++GC+P++ T+
Sbjct: 589 NNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTY 648
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ LIQ V+ A F+++ ++ D +I + +V+ A+ L EMI
Sbjct: 649 SSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMI- 707
Query: 507 KVRLRPWQATFKTLIEKL 524
+P T+ LI+ L
Sbjct: 708 NAGCQPTLQTYDVLIKGL 725
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 162/403 (40%), Gaps = 57/403 (14%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E AS FN + D+ P+ Y+ ++ + L L RMK C +TY
Sbjct: 522 ELASGMFNEMMDRG-LCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNV 580
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ L K S L + M++E +V T V+ G
Sbjct: 581 LIHGLTKQNNFSGAEELCKV---MLEEKISPDVV-TYSTVING----------------- 619
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
L +N + + AL F + +H G N TY+ +++ L + V + +
Sbjct: 620 LCNNGAIPL----------ALEMFNKMVKH-GCLPNLHTYSSLIQALGQEGRVEEAEEMF 668
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS- 348
E+KK+G D TY+K+ ++ A M++ +P++Q +L++ + +
Sbjct: 669 SELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNE 728
Query: 349 ---------------------INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
I N D+ + +++K L LS+ +YD + L++ G
Sbjct: 729 MVYHKLVALPNAASTSTFDDQIINKDV--ISVLSSKLAELDFELSRQLYDALLSRLSRSG 786
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R+ EA + ++M + P+ TY + L +A + + A +V M + C + +
Sbjct: 787 RWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYK 846
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
LI C + A F KM+ + +AD + +LING L
Sbjct: 847 ELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLG 889
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 131/546 (23%), Positives = 234/546 (42%), Gaps = 34/546 (6%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T E VL++++ DP+ A FF W +K F+ ++ +++L V ++ L
Sbjct: 41 VTPEVAGRVLQQVE-DPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLL 99
Query: 153 RRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVV 210
+ E C+ E Y +++ G K + L++ + VK MD + TL+ +
Sbjct: 100 KEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGVK---MDVLLHSTLIQGL 156
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVL--TVLKEL----RIYPVKALGFF-----RWVGEH 259
D+ ++ + M E S N + TV+ L RI +AL F R+ H
Sbjct: 157 CRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRID--EALELFDDMEKRYEASH 214
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G + + I+Y+ ++ L + + V + + M+ G ++ TY + K +
Sbjct: 215 -GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSE 273
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VY 376
++L M + + ++ D + +L ++ + + F +E L S K Y
Sbjct: 274 CLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF-----FERLLKSGKKPNVVTY 328
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L K GR DEA +++ M + PD ITYS +I G CKAGR + A +V M
Sbjct: 329 NVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMV 388
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+ CIP T+ L+ G + A M+ + +VL++ V
Sbjct: 389 HECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVES 448
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
A ++ +M K R +P T+ LI+ L ARR++EA L +M+ N P V
Sbjct: 449 ALEIYHKMKRKKR-QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALV 507
Query: 554 QYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
+ + K G V++A L + V P + + E + + +EA L + P +
Sbjct: 508 EVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLR-KKWEAASKLLRSPGFVAD 566
Query: 613 DSKISL 618
+ SL
Sbjct: 567 AATYSL 572
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 151/392 (38%), Gaps = 40/392 (10%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA FF + + SG K N +TYN + L + V + + ++ EM + D+ TY I
Sbjct: 308 KACQFFERLLK-SGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSI 366
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K M+ A +F MM P LL S FRV +
Sbjct: 367 IDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREA--FRVHEDMVNA 424
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G Y+ + + + A ++ MK +PD TY+ +I LC+A R ++A
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
LD ME + +P+ L++ C EVD A ++E + +L+
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEE 544
Query: 488 FLSQKRVNGAYKLL----------------------------VEMIEKVRL---RPWQAT 516
+K+ A KLL VE+IE++ L RP + T
Sbjct: 545 LYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGT 604
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE---FLKALS 573
+ ++ L G R+E A+ M + P + I + + + A E +A+
Sbjct: 605 YVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMV 664
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ A ++ S + + +DLL +
Sbjct: 665 AAGFTPQAQTMRTLSSCLRDAGY---QDLLVR 693
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 155/428 (36%), Gaps = 72/428 (16%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI----------------EEETYLSI 170
P+ YS ++ L D + L MKE I E+E
Sbjct: 253 PNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQF 312
Query: 171 LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV---------DVVLGSDWDDKIGK 221
L K+ K ++ N G+ K +D + L+ DV+ S D K
Sbjct: 313 FERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 372
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH---------------SGYKHNT 266
K + D F ++ E +PV + EH +G+
Sbjct: 373 AGRMDKAD--DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGL 430
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
TYN ++ + +SV + +MK++ + D +TY + + + R +++A + +
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490
Query: 327 MMDGPYKPSVQDCSLL----------------LRSISSINNPDLGLVFRVA-------NK 363
M P+ C L L ++ + LG F++ K
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550
Query: 364 YE-------SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+E S G + Y + K G+ DEA ++++ M G PD TY V+
Sbjct: 551 WEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLR 610
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LC R E A ++M GC P + T+T+LI C+A+ D A F M+ +
Sbjct: 611 SLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTP 670
Query: 477 DADLLDVL 484
A + L
Sbjct: 671 QAQTMRTL 678
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 165/379 (43%), Gaps = 17/379 (4%)
Query: 233 NFVLTVL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
N V+ L KE + +AL F R + G + +TYN ++ + + + +V E
Sbjct: 204 NIVIDFLCKEGELVEARAL-FVRM--KAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSE 260
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M+K G D+ TY + F KF ME A F M +V S + +
Sbjct: 261 MRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKE-- 318
Query: 352 PDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
GLV + + G ++ Y + K GR D+A ++ M + G P+
Sbjct: 319 ---GLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 375
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ ++ GLCK G+ +A NVL ME G + +T LI GH N +RAL +
Sbjct: 376 VTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQ 435
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M K + D L LI G ++V+ A LL +M LRP + T+++ L A
Sbjct: 436 MKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKM-AGCGLRPNTVIYTTIMDALFKAG 494
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDA-SEFLKALSVKEYPSSAAYL 584
+ EA+ LL + + P + I K G++ +A S F K + P+ AY
Sbjct: 495 KESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYT 554
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ + F G +A L+
Sbjct: 555 ALIDGFCKIGSLNKAMHLM 573
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 138/313 (44%), Gaps = 6/313 (1%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G N +TY ++ L + V + NV+ M++ G + + Y + E
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSE 427
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ L M + + V L+ + D + +K G + +Y
Sbjct: 428 RALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA--KSLLHKMAGCGLRPNTVIYTT 485
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I AL K G+ EA ++ + ++GF+P+ +TY +I GLCKAG +A + ++M E G
Sbjct: 486 IMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELG 545
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+++ +T LI G C +++A+ +M++K D + LI+G++ Q + A+
Sbjct: 546 LDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAF 605
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
L +MIE L+ + I ++EA +L M P + ++
Sbjct: 606 ALKTKMIES-GLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRK 664
Query: 556 ISKFGTVEDASEF 568
K G +E+AS
Sbjct: 665 YQKLGNMEEASSL 677
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 138/319 (43%), Gaps = 36/319 (11%)
Query: 253 FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ + GE G N +T++ + + V++ + +M+ G + TY +
Sbjct: 290 YSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDG 349
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPD--LGLVFR------ 359
K ++DA+ L + M+ P+V ++++ + + D L L+ R
Sbjct: 350 TCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKAN 409
Query: 360 ----------------------VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ N+ ++ G L S+Y + L K + DEA+ ++
Sbjct: 410 ELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLH 469
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M G P+ + Y+ ++ L KAG+ +A +L ++ ++G P++ T+ LI G C A
Sbjct: 470 KMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAG 529
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+ A+ F KM E D + LI+GF +N A L+ EMI+K + + +
Sbjct: 530 SISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK-GMSLDKVVY 588
Query: 518 KTLIEKLLGARRLEEAMNL 536
+LI+ + L++A L
Sbjct: 589 TSLIDGYMKQANLQDAFAL 607
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 103/250 (41%), Gaps = 8/250 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G + + Y ++ L + + V + +++ +M G + Y I K
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496
Query: 318 EDAVKLFEFMMDGPYKPSVQD-CSLL--LRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+AV L ++D ++P+V C+L+ L SI+ NK LG +
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE-----AISHFNKMRELGLDPNVQ 551
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + K+G ++A +M M + G D + Y+ +I G K +DA + +M
Sbjct: 552 AYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKM 611
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E+G D+ +T I G C N + A ++M+ D + + LI + +
Sbjct: 612 IESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNM 671
Query: 495 NGAYKLLVEM 504
A L EM
Sbjct: 672 EEASSLQNEM 681
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ N +TY ++ L + S+ + + +M++ G + ++ Y + F K +
Sbjct: 509 SGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNK 568
Query: 320 AVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ L M+D G V SL+ + N D F + K G L Y
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD---AFALKTKMIESGLQLDLYCYTC 625
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ EA ++ M G PD Y+ +I K G E+A ++ +EME
Sbjct: 626 FISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEME 682
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 7/335 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ L R +V + + ++M+ G D TY + K R +A
Sbjct: 274 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 333
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP+V + L+ N D F++ + + G +K YD +
Sbjct: 334 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEA--FKMIKEMVAAGVQPNKITYDNLV 391
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L K+G+ D A ++K M PD ITY+ +I G + +DA +L EME G
Sbjct: 392 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 451
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++I+I G C + E ++A +M K +A + LI+G+ + V+ A ++
Sbjct: 452 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 511
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M KV + P + +LI L R+EE+ M+++ P + I +
Sbjct: 512 FDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 570
Query: 560 --GTVEDASEFL-KALSVKEYPSSAAYLQVFESFF 591
G +E A + + + L P+ Y+ + ES+F
Sbjct: 571 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 605
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 149/342 (43%), Gaps = 8/342 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G N TY+G++ ++ + +V+ M G + + YI + + K +
Sbjct: 551 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 610
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E F+ M+D + +L+ ++SS N + FRV + E G+ VY
Sbjct: 611 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN--MEAAFRVLSGIEKNGSVPDVHVYS 668
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K ++A ++ M G +P+ + Y+ +I GLCK+G A NV + +
Sbjct: 669 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 728
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P+ T+T LI G C ++ A + +M+ DA + VL G S + A
Sbjct: 729 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 788
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQ 554
L+ EM +R ++F L++ +++E + LL ++ + P E +
Sbjct: 789 MFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 846
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYL-QVFESFFNEGR 595
+S+ G + + L K S+A + +F N+G+
Sbjct: 847 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 888
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+DTY K R ++DA ++ M D PS++ C+ LL+ + + + L+++V
Sbjct: 181 VDTYKKSGR-------VQDAAEVVLMMRDRGMAPSIRCCNALLKDL--LRADAMALLWKV 231
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
G S Y + A K+ FD A+K++ M+ G + +TY+ +I GLC+
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+G E+A +ME+ G +PD T+ LI G C + + A +M + +
Sbjct: 292 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 351
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
LI+GF+ + + A+K++ EM+ ++P + T+ L+ L +++ A LL+ M
Sbjct: 352 YANLIDGFMREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410
Query: 541 KKQNYPP 547
+ ++ P
Sbjct: 411 VRDSHRP 417
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ +TITYN I+ RH S +D + ++ EM+ G ++ TY + + E A
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L E M KP+ + L+ N + L + +K + Y+ +
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGN--VSLACEIFDKMTKVNVLPDLYCYNSLIF 532
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L+K+GR +E+ K M+ G P+ TYS +I G K G E A ++ M + G P
Sbjct: 533 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 592
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ + L++ + ++++++ F M+++ D + +LI+ S + A+++L
Sbjct: 593 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 652
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
IEK P + +LI L E+A +L M K+ P
Sbjct: 653 -SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 697
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 18/411 (4%)
Query: 238 VLKELRIYPVK--ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
++K +R YP L SG++ + + ++ + V+D VV M+
Sbjct: 145 LIKMIRAYPSPPVVLASIHRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDR 203
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G I + + + M K+ EFM+ P V S L+ + + D
Sbjct: 204 GMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTA 263
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+V + G L+ Y+ + L + G +EA K M++ G PD TY +I
Sbjct: 264 K--KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 321
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCK+ R +A +LDEM P++ + LI G D A +M+
Sbjct: 322 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 381
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ D L+ G +++ A LL +M+ RP T+ +IE ++A
Sbjct: 382 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFR 440
Query: 536 LLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
LL M+ P + + + + G E AS+ L+ ++ K P++ Y + +
Sbjct: 441 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 500
Query: 592 NEGRHYEAKDLLYKCPH-HIRQDSKI--SLLFGSAKSNKVTIPSRKESTSF 639
EG A ++ K ++ D SL+FG +K +V +EST +
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV-----EESTKY 546
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMK 397
LL++ I + +P + L A+ + +L +S S +V D + K GR +A +++
Sbjct: 143 GLLIKMIRAYPSPPVVL----ASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVL 198
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M++ G P + ++ L +A V + M G PD+ T++ LI+ +C
Sbjct: 199 MMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVR 258
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
E D A +M E+ + +VLI G V A+ +M E L P T+
Sbjct: 259 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM-EDYGLVPDGFTY 317
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL-S 573
LI L +RR EA LL M P + I F G ++A + +K + +
Sbjct: 318 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 377
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
P+ Y + G+ A LL
Sbjct: 378 AGVQPNKITYDNLVRGLCKMGQMDRASLLL 407
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/308 (17%), Positives = 129/308 (41%), Gaps = 22/308 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G + Y+ ++ L + + +++EM K+G + +I Y + K +
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 715
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A +F ++ P+ + L+ + D+ F + N+ + G + VY
Sbjct: 716 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG--DISNAFYLYNEMLATGITPDAFVYS 773
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + G ++A +++ M G + +++ ++ G CK G+ ++ +L +
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGR 832
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA------------------D 479
G +P+ T +I G A ++ F ++ +K ++ A D
Sbjct: 833 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 892
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++D +I + ++ A +L ++I +++ +++ L +L EA+NLL+
Sbjct: 893 VVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 951
Query: 540 MKKQNYPP 547
M K+ P
Sbjct: 952 MDKRGICP 959
>gi|356547408|ref|XP_003542104.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Glycine max]
Length = 631
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 105/438 (23%), Positives = 180/438 (41%), Gaps = 61/438 (13%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE +K+++ V +LK VK + FF+W G+ ++H++ TY ++R
Sbjct: 68 WGPDAEKALEVLKLKVDPRLVREILKIDVEVSVK-IQFFKWAGKRRNFEHDSTTYMALIR 126
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L H + W +++M K M +I R K +M+ A+ +F Y+
Sbjct: 127 CLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVNRALSVF-------YQV 179
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVAN--KYESLGNSLSKSV--------YDGIHRALT 384
+ C R +S N + ++ + + K L N + V Y + A
Sbjct: 180 KGRKC----RPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFA 235
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KL R D A ++ MK G +P Y+ ++ K G+ E+A ++ EM C+ +
Sbjct: 236 KLNRDDSAIRLFDEMKENGLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVF 295
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI+G + V+ A + + M++ D L++ LIN + A KL EM
Sbjct: 296 TYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNHLRDAIKLFDEM 355
Query: 505 -----------------------------------IEKVRLRPWQATFKTLIEKLLGARR 529
++K + P T+ LI+ R
Sbjct: 356 KLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNR 415
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEYPSSA-AYLQ 585
+E+A+ LL M ++ +PP P + I+ G + A+E + L SSA Y
Sbjct: 416 VEKALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAV 475
Query: 586 VFESFFNEGRHYEAKDLL 603
+ + F GR EA +L
Sbjct: 476 MIKHFGKCGRLNEAINLF 493
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 120/481 (24%), Positives = 205/481 (42%), Gaps = 21/481 (4%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ V +L K+D + FF W ++ F ST Y ++R
Sbjct: 68 WGPDAEKALEVLKLKVDPRLVREIL-KIDVEVSVKIQFFKWAGKRRNFEHDSTTYMALIR 126
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L + W T++ M + C + I+ +L KAK + AL+ F+ VK
Sbjct: 127 CLDEHRMFGEVWKTIQDMVKGSCAMAPAELSEIVRILGKAKMVN--RALSVFYQ--VKGR 182
Query: 198 AMDNVAKTLVDVVL---GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV------- 247
A T ++L +K+ + +M E+ F TV I
Sbjct: 183 KCRPTASTYNSIILMLMQEGHHEKVHELYNEMCSEVH-CFPDTVTYSALISAFAKLNRDD 241
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A+ F + E+ G + Y ++ + + V + +V+EM+ + + TY ++
Sbjct: 242 SAIRLFDEMKEN-GLQPTAKIYTTLMGIYFKVGKVEEALGLVKEMRARRCLLTVFTYTEL 300
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R K +EDA ++ M+ KP V + L+ + N+ L ++ ++ + L
Sbjct: 301 IRGLGKSGRVEDAYMTYKNMLKDGCKPDVVLMNNLINILGRSNH--LRDAIKLFDEMKLL 358
Query: 368 GNSLSKSVYDGIHRALTKL-GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ + Y+ I ++L + EA + MK G P + TYS +I G CK R E
Sbjct: 359 NCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKDGIVPSSFTYSILIDGYCKTNRVEK 418
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L+EM+E G P + LI A D A F ++ E + A + V+I
Sbjct: 419 ALLLLEEMDEKGFPPCPAAYCSLINTLGVAKRYDVANELFQELKENCGCSSARVYAVMIK 478
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F R+N A L EM +K+ P + L+ ++ A R++EA +L R M++
Sbjct: 479 HFGKCGRLNEAINLFNEM-KKLGCTPDVYAYNALMTGMVRAERMDEAFSLFRTMEENGCT 537
Query: 547 P 547
P
Sbjct: 538 P 538
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/476 (21%), Positives = 198/476 (41%), Gaps = 43/476 (9%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ S++ +L + + EK +N +C + P + YS ++ +
Sbjct: 190 TYNSIILMLMQ-EGHHEKVHELYNEMCSEVHCFPDTVTYSALISAFAKLNRDDSAIRLFD 248
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
MKE+ + Y +++G+ K K + AL G+VKE+ + L+ V +
Sbjct: 249 EMKENGLQPTAKIYTTLMGIYFKVGKVEE--AL-----GLVKEM---RARRCLLTVFTYT 298
Query: 214 DWDDKIGK--KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
+ +GK ++ED + + +LK+ G K + + N
Sbjct: 299 ELIRGLGKSGRVEDAYMTYKN-----MLKD-------------------GCKPDVVLMNN 334
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ-FQKFRMMEDAVKLFEFMMDG 330
++ +L R +RD + +EMK ++ TY I + F+ + +A FE M
Sbjct: 335 LINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASSWFERMKKD 394
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
PS S+L+ N + L+ + + + G + Y + L R+D
Sbjct: 395 GIVPSSFTYSILIDGYCKTNRVEKALL--LLEEMDEKGFPPCPAAYCSLINTLGVAKRYD 452
Query: 391 EAEKMMKAMK-NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
A ++ + +K N G + Y+ +I K GR +A N+ +EM++ GC PD+ + L
Sbjct: 453 VANELFQELKENCGCSSARV-YAVMIKHFGKCGRLNEAINLFNEMKKLGCTPDVYAYNAL 511
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+ G A +D A F M E D + ++++NG GA ++ +M +
Sbjct: 512 MTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMFTKM-KNST 570
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
++P +F T++ L A EEA L++ M + + + + G V+D
Sbjct: 571 IKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYDLITYSSILEAVGKVDDC 626
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 68/406 (16%), Positives = 176/406 (43%), Gaps = 16/406 (3%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
+E+ +++ +T+ +++ KL+ D + A F+ + + +P++ +Y+ ++
Sbjct: 212 NEMCSEVHCFPDTVTYSALISAFAKLNRD-DSAIRLFDEM-KENGLQPTAKIYTTLMGIY 269
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD--LAALNQFHDGMVKEI 197
+++ ++ M+ C + TY ++ L K+ + D + N DG ++
Sbjct: 270 FKVGKVEEALGLVKEMRARRCLLTVFTYTELIRGLGKSGRVEDAYMTYKNMLKDGCKPDV 329
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI------ELSDNFVLTVLKELRIYPVKALG 251
+ N L++++ S+ K ++MK+ ++ N ++ L E + +A
Sbjct: 330 VLMN---NLINILGRSNHLRDAIKLFDEMKLLNCAPNVVTYNTIIKSLFEAKAPLSEASS 386
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+F + + G ++ TY+ ++ + V ++EEM ++G+ Y +
Sbjct: 387 WFERM-KKDGIVPSSFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINTL 445
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ + A +LF+ + + S + +++++ L + N+ + LG +
Sbjct: 446 GVAKRYDVANELFQELKENCGCSSARVYAVMIKHFGKCGR--LNEAINLFNEMKKLGCTP 503
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + + + R DEA + + M+ G PD +++ ++ GL + G + A +
Sbjct: 504 DVYAYNALMTGMVRAERMDEAFSLFRTMEENGCTPDINSHNIILNGLARTGGPKGALEMF 563
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+M+ + PD+ ++ ++ A + A +M K + D
Sbjct: 564 TKMKNSTIKPDVVSFNTILGCLSRAGLFEEAAKLMQEMSSKGFQYD 609
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 7/339 (2%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ +RD K+ + + DT K+ K + + +E +
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESL 128
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ Y S+ ++L+ S + ++ L V + G S ++ + KLG
Sbjct: 129 ECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ AM+ +G +PD TYS +I GLCK + +DA + DEM +NG +P+ T+T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI GHC VD A+ + +M+ ++ D + LI G + + A L EM K
Sbjct: 247 LIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMK- 305
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
L+P + T+ TLI+ LE A + M K+N + IS G DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDA 365
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L+ LSV P Y + F +G + LL
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+D P+ + L+ DL + +SL L Y+ +
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLI--TYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A+ + M G +PD ITY+ +I G CK G E A M +
Sbjct: 284 YGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ + ++IN F + V KL
Sbjct: 344 LDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 501 LVEM 504
L EM
Sbjct: 404 LKEM 407
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 86/202 (42%), Gaps = 2/202 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ SG + + TY+ ++ L + + D + +EM G + T+ + K +
Sbjct: 198 QASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRV 257
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A++++ M+ P + + L+ + DL + ++ G K Y
Sbjct: 258 DLAMEIYXQMLSQSLSPDLITYNTLIYGLC--KKGDLKQAQDLXDEMSMKGLKPDKITYT 315
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G + A + K M D + Y+ +I GLC+ GR DA +L EM
Sbjct: 316 TLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSV 375
Query: 438 GCIPDIKTWTILIQGHCAANEV 459
G P+I T+T++I C +V
Sbjct: 376 GLKPEIGTYTMIINEFCKKGDV 397
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++ V + +M + D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ S DL F + L Y +
Sbjct: 295 AQDLXDEMSMKGLKPDKITYTTLIDG--SCKEGDLETAFEYRKRMIKENIRLDXVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPSVVT 418
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 155/346 (44%), Gaps = 8/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +T T+ ++R L + D ++ ++M EG++ ++ TY + K A
Sbjct: 134 GHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 193
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + +K G S Y +
Sbjct: 194 IRLLRSMEQGNCQPDVVVYTSIIDSLCK--DRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L L + ++ M N+ PD + +S V+ LCK G+ +A +V+D M G
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ L+ GHC +E+D A+ F M+ Y + + LING+ +R++ A L
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM +K L P T+ TL+ RL++A+ L M P + + Y+
Sbjct: 372 FEEMCQK-ELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLC 429
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K +++A LK + P Y V + G A+D+
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 178/422 (42%), Gaps = 26/422 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + Y SI+ L K ++ ++
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTE-- 227
Query: 185 ALNQFHDGMVKEIAMDNVAKT-LVDVVLG-SDW-------DDKIGKKLEDMKIELSDNFV 235
A N F + + I+ D T L+ + +W + I K+ + + V
Sbjct: 228 AFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP-DVVIFSTVV 286
Query: 236 LTVLKELRI---YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ KE +I + V + R G + N +TYN ++ + + V + M
Sbjct: 287 DALCKEGKITEAHDVVDMMIIR------GVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
GY ++ +Y + + K + M+ A LFE M P+ + L+
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGRLQ 400
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D +F ++ + G + Y + L K DEA ++K ++ + +PD Y+
Sbjct: 401 DAIALF---HEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYT 457
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
VI G+C+AG E A ++ + G P+++T+TI+I G C +D A F +M
Sbjct: 458 IVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGN 517
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D + + G L K A +LL EM+ R + TL+ ++L +L++
Sbjct: 518 GCSPDGCTYNTITQGLLQNKEALRAIQLLQEML--ARGFSADVSTTTLLVEMLCDDKLDQ 575
Query: 533 AM 534
++
Sbjct: 576 SV 577
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 138/349 (39%), Gaps = 43/349 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E + + + Y I+ L + V + +N+ +M +G DI TY +
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ L M++ P V ++
Sbjct: 261 KHVTTLLNQMINSKIMPDV-------------------------------------VIFS 283
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K G+ EA ++ M G EP+ +TY+ ++ G C ++A V D M N
Sbjct: 284 TVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHN 343
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ ++ LI G+C +D+A F +M +K + + L++ R+ A
Sbjct: 344 GYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMH-XCHVGRLQDA 402
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
L EM+ ++ P AT++ L++ L L+EAM LL+ ++ N P + + +
Sbjct: 403 IALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVID 461
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + G +E A + LS K P+ Y + G EA L
Sbjct: 462 GMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKL 510
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P V ++L+ S +N LG F V K LG+ + + + R L G+ +A
Sbjct: 102 PDVYTLNILINSFCHLNR--LGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDAL 159
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF+P+ +TY +I GLCK G A +L ME+ C PD+ +T +I
Sbjct: 160 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 219
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F+KM+ + D LI+ + LL +MI ++ P
Sbjct: 220 CKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINS-KIMPD 278
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L ++ EA +++ +M + P
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 312
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
++ K ++ + M + G PD T + +I C R A +VL ++ + G P
Sbjct: 78 SIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQP 137
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+T LI+G C ++ AL F KM+ + + + LING N A +LL
Sbjct: 138 DTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLL 197
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
M E+ +P + ++I+ L R++ EA NL M Q P + I
Sbjct: 198 RSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCN 256
Query: 562 V---EDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + L + ++ K P + V ++ EG+ EA D++
Sbjct: 257 LCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 302
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
SL S ++ H D+A M + P + +++++ + K ++
Sbjct: 27 SLPPYFSSLSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYP 86
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ ++M+ G PD+ T ILI C N + A AK+++ + D LI
Sbjct: 87 TVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLI 146
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G + ++ A L +MI + +P T+ TLI L A+ LLR M++ N
Sbjct: 147 RGLCVEGKIGDALHLFDKMIGE-GFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNC 205
Query: 546 PP 547
P
Sbjct: 206 QP 207
>gi|293332227|ref|NP_001169164.1| uncharacterized protein LOC100383014 [Zea mays]
gi|223975267|gb|ACN31821.1| unknown [Zea mays]
Length = 469
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 193/462 (41%), Gaps = 45/462 (9%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKK 179
++ RP+ Y++++ N +++ L RMKE E TY S++ G + +K
Sbjct: 37 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEK 96
Query: 180 ASDLAALNQF--HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
L+++ D + IA TL+ + +D D + +EL+
Sbjct: 97 ERAYRMLSEWIESDPTLHSIAY----HTLLYCLSKNDMDKE--------AVELAKKM--- 141
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
GY + T++ ++ + D +V++ K+G
Sbjct: 142 --------------------SKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGG 181
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ D YI I + F + + + A K F M+ SV+ ++++ + + L
Sbjct: 182 NLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERAL- 240
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ G S + ++ + KLG +A+ +K + G PD IT++ +I G
Sbjct: 241 -ETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDG 299
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LC + +DA N EM E G P+++T+ +LI G C+A V +A+ KM D
Sbjct: 300 LCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 359
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A + I F +++ A KL +M + + P T+ LI+ L RR++EA ++
Sbjct: 360 AYSFNAPILSFCRMRKIEKAQKLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEII 418
Query: 538 RLMKKQNYPPFPE----PFVQYISKFGTVEDASEFLKALSVK 575
M+ + + P V ++K G +A F+ L K
Sbjct: 419 LAMESISCIGTKQHTYWPVVGALTKMGRFSEAGMFMNKLHRK 460
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 141/351 (40%), Gaps = 43/351 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TYN ++ + R V + +V++M++ G ++ TY + F +E+A
Sbjct: 5 GCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEA 64
Query: 321 VKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
V + E M + G SL+ + + +R+ +++ +L Y +
Sbjct: 65 VCVLERMKEKGVSATEATYRSLVHGAFRCLEKER---AYRMLSEWIESDPTLHSIAYHTL 121
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE------ 433
L+K EA ++ K M G+ + T+S VI K D C ++D+
Sbjct: 122 LYCLSKNDMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGG 181
Query: 434 -----------------------------MEENGCIPDIKTWTILIQGHCAANEVDRALL 464
M +G + ++++ I+I A EV+RAL
Sbjct: 182 NLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERALE 241
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M E + + + LING+L V+ A K ++M+ + L P TF +LI+ L
Sbjct: 242 TIKVMQESGFSPNLVTFNTLINGYLKLGNVHDA-KAFLKMVMEHGLMPDVITFTSLIDGL 300
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
+L++A N M + P + + + + G V A E L +
Sbjct: 301 CHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKM 351
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 5/149 (3%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G PD TY+ ++ G+C+ G ++A ++ +ME G P++ T+T+L+ G C A+
Sbjct: 1 MPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASR 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP--WQAT 516
V+ A+ +M EK A L++G AY++L E IE P
Sbjct: 61 VEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEKERAYRMLSEWIES---DPTLHSIA 117
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ TL+ L +EA+ L + M K+ Y
Sbjct: 118 YHTLLYCLSKNDMDKEAVELAKKMSKRGY 146
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 103/227 (45%), Gaps = 13/227 (5%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + + + G DEA +++K M+ AG P+ +TY+ ++ G C A R E+A VL+ M+
Sbjct: 13 YNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMK 72
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E G T+ L+ G E +RA +M+ + ++D L + + L N
Sbjct: 73 EKGVSATEATYRSLVHGAFRCLEKERAY----RMLSEWIESDPTLHSIAYHTLLYCLSKN 128
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL----MKKQNYPPFPEP 551
K VE+ +K+ R + T + A ++ E+ +L L +KK F +
Sbjct: 129 DMDKEAVELAKKMSKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGGNLGF-DM 187
Query: 552 FVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEG 594
++ I F +D S+ F + +S S +Y V + F G
Sbjct: 188 YIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAG 234
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 143/349 (40%), Gaps = 42/349 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N + YN I+ L + V + + EM KEG D+ TY I F +
Sbjct: 72 EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A LF+ M++ P+ ++L+ D
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILI---------------------------------D 158
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G L K EA + + M G EPD TY+ ++ G C + ++A + + M+
Sbjct: 159 G----LCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRK 214
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+++++ ILI GHC + +D A A+M K+ D L+ GF R A
Sbjct: 215 GCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEA 274
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQ 554
+LL EM L P T+ +++ L L+EA LL+ M++ P ++
Sbjct: 275 QELLKEMC-SYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIE 333
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ FG +E A E L VK P+ Y + G EA +L
Sbjct: 334 GMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 156/352 (44%), Gaps = 19/352 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+N +L L + D + +EM K G+E D+ TY I K A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
++L + M + KP+V + ++ S+ LV + + + G Y
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDR-----LVTEAMDFFSEMVKEGIPPDVFTYS 119
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I LGR +EA + K M P+ +T++ +I GLCK +A V + M E
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEK 179
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ T+ L+ G+C+ +++D A F M K + ++LING R++ A
Sbjct: 180 GLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEA 239
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY-- 555
LL EM K L P T+ TL+ R +EA LL+ M +Y P + Y
Sbjct: 240 KGLLAEMSHK-SLTPDIFTYSTLMRGFCQVGRPQEAQELLKEM--CSYGLLPN-LITYSI 295
Query: 556 ----ISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G +++A E LKA+ K P+ Y + E G+ A++L
Sbjct: 296 VLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAAREL 347
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 138/302 (45%), Gaps = 12/302 (3%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DAVKLF+ M+ ++P V S ++ + + N + L ++ K E G + Y+
Sbjct: 28 DAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL--QLLKKMEEKGCKPNVVAYNT 85
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I +L K EA M G PD TYS ++ G C GR +A ++ +M E
Sbjct: 86 IIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERN 145
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IP+ T+TILI G C + A L F M EK + D + L++G+ S+ +++ A
Sbjct: 146 VIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQ 205
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
KL ++++ P ++ LI + R++EA LL M ++ P + +
Sbjct: 206 KLF-NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRG 264
Query: 559 F---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDS 614
F G ++A E LK + S P+ Y V + G EA +LL Q+S
Sbjct: 265 FCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELL-----KAMQES 319
Query: 615 KI 616
KI
Sbjct: 320 KI 321
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 137/285 (48%), Gaps = 11/285 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+ ++ L + + + W V E M ++G E D+ TY + + M++A KLF
Sbjct: 149 NKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLF 208
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV--YDGIH 380
M P+V+ ++L+ D GL+ +++K SL+ + Y +
Sbjct: 209 NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHK------SLTPDIFTYSTLM 262
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R ++GR EA++++K M + G P+ ITYS V+ GLCK G ++A +L M+E+
Sbjct: 263 RGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIE 322
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I +TILI+G C +++ A F+ + K V+I+G L N A +L
Sbjct: 323 PNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACEL 382
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
EM L P T+ +I+ L A+ L+ M + +
Sbjct: 383 FREMAVNGCL-PNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGF 426
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 5/246 (2%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG + ++ + L + +A K+ M G EPD ITYS +I GLCK G
Sbjct: 4 LGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTM 63
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L +MEE GC P++ + +I C V A+ F++M+++ D +++
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF + RVN A L +M+E+ + P + TF LI+ L R + EA + M ++
Sbjct: 124 GFCNLGRVNEATSLFKQMVER-NVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLE 182
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN----EGRHYEAKDL 602
P + + + + E K ++ + A ++ + N GR EAK L
Sbjct: 183 PDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGL 242
Query: 603 LYKCPH 608
L + H
Sbjct: 243 LAEMSH 248
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 127/521 (24%), Positives = 209/521 (40%), Gaps = 116/521 (22%)
Query: 62 FSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCD 121
FS+ P +S +L+L C S EL +L + + ES VL +L D +A A F + D
Sbjct: 196 FSSDP-ASFDLLLLCLPSAELLRRLRQYGLSPSPESCNAVLSRLPLD--EAIALFRELPD 252
Query: 122 KKQFRPSSTVYSLMLRNLVN----KDSLKQF--------WVTLRRMKEDHCYIEE----- 164
K + ++++L+ L++ KD+ + F VT M +C E
Sbjct: 253 K-----NVCSHNILLKALLSAGRLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAV 307
Query: 165 ---------------ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDV 209
Y S++ +L + SD AL D + +A+D V T V
Sbjct: 308 KLLDEMAAKGLESNATVYTSVIALLCNKGQVSD--ALRVLEDMTMHGVALDAVVFTTVIS 365
Query: 210 VLGSDWDDKIGKKL-EDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
S D ++L E+M + G + +T
Sbjct: 366 GFCSKGDLAAARRLFEEM-------------------------------QKRGLAADRVT 394
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+ ++ L R +++ V++EM +G ++D+ TY + + K M +A
Sbjct: 395 HTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEA-------- 446
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKL 386
FRV N E +G ++ +V Y + L K
Sbjct: 447 -----------------------------FRVHN--EMVGRRVAPNVVTYTALSDGLCKQ 475
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G A +++ M N G E + TY+ +I GLCK G E A ++ EME G D+ T+
Sbjct: 476 GDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTY 535
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T LI C + E DRA +M++K +VL+NGF RV G KLL M+E
Sbjct: 536 TTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLE 595
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K +RP T+ +L+++ + ++ + + M Q P
Sbjct: 596 K-NVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAP 635
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 155/366 (42%), Gaps = 27/366 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FR + + N ++N +L+ L ++D +EM D+ TY +
Sbjct: 242 EAIALFRELPDK-----NVCSHNILLKALLSAGRLKDACQHFDEMSSPP---DVVTYGTM 293
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI--NNPDLGLVFRVANKYE 365
+ +E+AVKL + M ++ + + S+ ++ N + RV
Sbjct: 294 VHGYCVRGELENAVKLLDEMA----AKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT 349
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G +L V+ + G A ++ + M+ G D +T++ +I GLC+AG +
Sbjct: 350 MHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELK 409
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A VL EM + G D+ T+T+LI G+C + A +M+ + + L
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469
Query: 486 NGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+G Q V A +LL EM K + L + T+ +LI L LE+AM R+M +
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVY--TYNSLINGLCKFGNLEQAM---RIMTEME 524
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHY 597
Y + T+ + EF +A ++ + PS A Y + F GR
Sbjct: 525 AAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVE 584
Query: 598 EAKDLL 603
K LL
Sbjct: 585 GGKKLL 590
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 109/262 (41%), Gaps = 14/262 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ ++ EM+ G+ D+ TY + K + A
Sbjct: 492 GLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRA 551
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI- 379
+ + M+D KPS+ ++L+ + RV + L L K+V +
Sbjct: 552 HNMLQEMLDKGIKPSIATYNVLMNGFC--------MSGRVEGGKKLLEWMLEKNVRPNVV 603
Query: 380 -HRALTKLGRFDEAEK----MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ +L K D+ K + K M + P+ TY+ +I G CKA ++A EM
Sbjct: 604 TYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEM 663
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G +++ LI+ + A + F KM + A+ D+ ++ ++ +
Sbjct: 664 IEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNL 723
Query: 495 NGAYKLLVEMIEKVRLRPWQAT 516
L E++E ++ T
Sbjct: 724 ESTITLCDELVEASHVKSKAGT 745
>gi|297842227|ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
gi|297334836|gb|EFH65254.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata]
Length = 863
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 185/421 (43%), Gaps = 15/421 (3%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
I + L+ K +LS N V KE R ++L F+++ K N Y ++ +L
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + V +EM +G + +Y + + + E +++L + M + PS+
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSI 211
Query: 337 QDCSLLLRSISSINNPDLGLVFRVAN-KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ ++ + + GL+ A ++E + + Y+ + A G DEAE +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIV--TYNTLLSACAIRGLGDEAEMV 269
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M + G PD TYS ++ K R E ++L EM G +PDI ++ +L++ +
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAK 329
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ + A+ F +M +A+ VL+N F R + +L +EM + P A
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAA 388
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
T+ LIE +E + L M ++N P E + I K G EDA + L+ +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 573 SVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI----SLLFGSAKSNK 627
+ + PSS AY V E+ F + YE + + H + + I SLL+ A+
Sbjct: 449 TANDIVPSSKAYTGVIEA-FGQAALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGL 507
Query: 628 V 628
V
Sbjct: 508 V 508
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 124/331 (37%), Gaps = 35/331 (10%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
LG F + H G + + +TYN +L A + V M G D+ TY +
Sbjct: 232 LGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRV------- 360
F K R +E L M G P + ++LL + + + +G+ ++
Sbjct: 291 TFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 361 -ANKYESLGNSLSKSV-YDGIHRALTKL----------------------GRFDEAEKMM 396
AN Y L N +S YD + + ++ G F E +
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M EPD TY +IF K G EDA +L M N +P K +T +I+ A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ AL+ F M E + + L+ F V + +L +++ R + T
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETYHSLLYSFARGGLVKESEAILSRLVDSGIPRN-RDT 529
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F IE + EEA+ M+K P
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 7/335 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ L R +V + + ++M+ G D TY + K R +A
Sbjct: 147 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 206
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP+V + L+ N D F++ + + G +K YD +
Sbjct: 207 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEA--FKMIKEMVAAGVQPNKITYDNLV 264
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L K+G+ D A ++K M PD ITY+ +I G + +DA +L EME G
Sbjct: 265 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGIS 324
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++I+I G C + E ++A +M K +A + LI+G+ + V+ A ++
Sbjct: 325 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 384
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M KV + P + +LI L R+EE+ M+++ P + I +
Sbjct: 385 FDKM-TKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 443
Query: 560 --GTVEDASEFL-KALSVKEYPSSAAYLQVFESFF 591
G +E A + + + L P+ Y+ + ES+F
Sbjct: 444 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 478
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 8/342 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G N TY+G++ ++ + +V+ M G + + YI + + K +
Sbjct: 424 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 483
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E F+ M+D + +L+ ++SS N + FRV ++ E G+ VY
Sbjct: 484 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN--MEAAFRVLSEIEKNGSVPDVHVYS 541
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K ++A ++ M G +P+ + Y+ +I GLCK+G A NV + +
Sbjct: 542 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 601
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P+ T+T LI G C ++ A + +M+ DA + VL G S + A
Sbjct: 602 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 661
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQ 554
L+ EM +R ++F L++ +++E + LL ++ + P E +
Sbjct: 662 MFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 719
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYL-QVFESFFNEGR 595
+S+ G + + L K S+A + +F N+G+
Sbjct: 720 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 761
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 122/247 (49%), Gaps = 10/247 (4%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+DTY K R ++DA ++ M D PS++ C+ LL+ + + + L+++V
Sbjct: 54 VDTYKKSGR-------VQDAAEVVLMMRDRGLAPSIRCCNALLKDL--LRADAMALLWKV 104
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
G S Y + A K+ FD A+K++ M+ G + +TY+ +I GLC+
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+G E+A +ME+ G +PD T+ LI G C + + A +M + +
Sbjct: 165 SGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVV 224
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
LI+GF+ + + A+K++ EM+ ++P + T+ L+ L +++ A LL+ M
Sbjct: 225 YANLIDGFMREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283
Query: 541 KKQNYPP 547
+ ++ P
Sbjct: 284 VRDSHRP 290
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 129/286 (45%), Gaps = 3/286 (1%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ +TITYN I+ RH + +D + ++ EM+ G ++ TY + + E A
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L E M KP+ + L+ N + L + +K + Y+ +
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGN--VSLACEIFDKMTKVNVLPDLYCYNSLIF 405
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L+K+GR +E+ K M+ G P+ TYS +I G K G E A ++ M + G P
Sbjct: 406 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 465
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ + L++ + ++++++ F M+++ D + +LI+ S + A+++L
Sbjct: 466 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 525
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
E IEK P + +LI L E+A +L M K+ P
Sbjct: 526 SE-IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 570
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 167/411 (40%), Gaps = 18/411 (4%)
Query: 238 VLKELRIYPVK--ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
++K +R YP L SG++ + + ++ + V+D VV M+
Sbjct: 18 LIKMIRAYPSPPVVLASIHRALSDSGHRSPAV-LDVLVDTYKKSGRVQDAAEVVLMMRDR 76
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G I + + + M K+ EFM+ P V S L+ + + D
Sbjct: 77 GLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTA 136
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+V + G L+ Y+ + L + G +EA K M++ G PD TY +I
Sbjct: 137 K--KVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALI 194
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCK+ R +A +LDEM P++ + LI G D A +M+
Sbjct: 195 NGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQ 254
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ D L+ G +++ A LL +M+ RP T+ +IE ++A
Sbjct: 255 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHNKKDAFR 313
Query: 536 LLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
LL M+ P + + + + G E AS+ L+ ++ K P++ Y + +
Sbjct: 314 LLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYC 373
Query: 592 NEGRHYEAKDLLYKCPH-HIRQDSKI--SLLFGSAKSNKVTIPSRKESTSF 639
EG A ++ K ++ D SL+FG +K +V +EST +
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRV-----EESTKY 419
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 112/270 (41%), Gaps = 11/270 (4%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMK 397
LL++ I + +P + L A+ + +L +S S +V D + K GR +A +++
Sbjct: 16 GLLIKMIRAYPSPPVVL----ASIHRALSDSGHRSPAVLDVLVDTYKKSGRVQDAAEVVL 71
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M++ G P + ++ L +A V + M G PD+ T++ LI+ +C
Sbjct: 72 MMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVR 131
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
E D A +M E+ + +VLI G V A+ +M E L P T+
Sbjct: 132 EFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDM-EDYGLVPDGFTY 190
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL-S 573
LI L +RR EA LL M P + I F G ++A + +K + +
Sbjct: 191 GALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVA 250
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
P+ Y + G+ A LL
Sbjct: 251 AGVQPNKITYDNLVRGLCKMGQMDRASLLL 280
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 23/271 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N + YN ++ L + + NV + +G + TY + K + +A
Sbjct: 567 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 626
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+ M+ P S+L SS + + + F + + L S S ++ +
Sbjct: 627 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM-FLIEEMF--LRGHASISSFNNLV 683
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE---- 436
K G+ E K++ + G P+ +T +I GL +AG+ + + E+++
Sbjct: 684 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 743
Query: 437 ---------------NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G IP + +I+ HC +D+AL+ ++ K+
Sbjct: 744 SAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 802
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+++ + +++ A LL EM ++ L+P
Sbjct: 803 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 833
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 56/309 (18%), Positives = 130/309 (42%), Gaps = 23/309 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G + Y+ ++ L + + +++EM K+G + +I Y + K +
Sbjct: 529 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 588
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A +F ++ P+ + L+ + D+ F + N+ + G + VY
Sbjct: 589 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG--DISNAFYLYNEMLATGITPDAFVYS 646
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + G ++A +++ M G + +++ ++ G CK G+ ++ +L +
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGR 705
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA------------------D 479
G +P+ T +I G A ++ F ++ +K ++ A D
Sbjct: 706 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 765
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++D +I + ++ A +L ++I +++ +++ L +L EA+NLL+
Sbjct: 766 VVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 824
Query: 540 M-KKQNYPP 547
M K+ N P
Sbjct: 825 MDKRGNLQP 833
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 11/351 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +T+ +L + D + +++ G++ ++ TY + R K R + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
V+LF M +P+V + L+ + I D + R K N ++ + +
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT---FTAL 264
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K+G+ EA+++ M PD TY +I GLC G ++A + ME NGC
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ +T LI G C + V+ + F +M +K A+ VLI G+ R + A +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ----NYPPFPEPFVQY 555
+ +M + R P T+ L++ L ++E+A+ + M+K+ N + +Q
Sbjct: 385 VFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY-TIIIQG 442
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA + +L K P+ Y + F G +EA L K
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 19/333 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K N +TY ++R L ++ + + +M G ++ TY + + DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L MM +P+V + L+ + + G + Y + + SVY +
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKV-----GKLMEAKELYNVM---IQMSVYPDVF 294
Query: 381 ------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L G DEA +M M+ G P+ + Y+ +I G CK+ R ED + EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G + + T+T+LIQG+C D A F +M + D +VL++G +V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A ++ E + K + T+ +I+ + ++E+A +L + + P +
Sbjct: 415 EKAL-MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAY 583
IS F G + +A K + + P+ + Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 11/309 (3%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+Y KI R DA+ LF M+ PS+ D + LL I+ +N D+ V +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV--VISLFE 107
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ + LG + + + + A + M GFEPD +T++ ++ G C
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R EDA + D++ G P++ T+T LI+ C ++ A+ F +M + +
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L+ G R A LL +M+++ R+ P TF LI+ + +L EA L +M +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 543 QNYPPFPEPF-----VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRH 596
+ +P+ F + + +G +++A + + YP+ Y + F R
Sbjct: 287 MSV--YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 597 YEAKDLLYK 605
+ + Y+
Sbjct: 345 EDGMKIFYE 353
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 152/329 (46%), Gaps = 8/329 (2%)
Query: 279 HESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
H + DF ++ + ++ K G++ D T+ + R + +A+ LF+ M+ ++P+V
Sbjct: 92 HLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVV 151
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
L+ + + + F + ++ + G S + Y+ + L KL + +M
Sbjct: 152 TYGTLINGLCK--DRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 209
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M ++ PD T + V+ LCK G +A +V+D M G P++ T+ L+ GHC N
Sbjct: 210 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 269
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
EVD A+ F M+ K+ A+ + LING+ + V+ A L EM + L P T+
Sbjct: 270 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM-SRQELTPNTVTY 328
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSV 574
TLI L RL++A++L M + P Y+ K ++ A LKA+
Sbjct: 329 NTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEG 388
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ P Y + + G +A+DL
Sbjct: 389 SNWDPDIQIYTTILDGMCRAGELEDARDL 417
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 150/355 (42%), Gaps = 44/355 (12%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F + +GE G++ N +TY ++ L + V + +N+ EM +G +I TY +
Sbjct: 138 FDKMIGE--GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGL 195
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + L M+D P VF +
Sbjct: 196 CKLCEWKHVTTLMNEMVDSKIMPD---------------------VFTL----------- 223
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+V D AL K G EA ++ M + G EP+ +TY+ ++ G C + A V
Sbjct: 224 -NTVVD----ALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M C+ ++ ++ LI G+C VD+A+ F +M + + + LI+G
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
R+ A L EM+ + ++ P T++TL + L R L++AM LL+ ++ N+ P +
Sbjct: 339 GRLQDAISLFHEMVARGQI-PDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQI 397
Query: 552 FVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + + G +EDA + LS K P+ Y + +G EA L
Sbjct: 398 YTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKL 452
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 134/311 (43%), Gaps = 19/311 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T+ + +L +A+ + ++ +M G D+ T + F R + A +
Sbjct: 580 STVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVL 639
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++ ++P V L+ + K + G S Y+ + AL
Sbjct: 640 AKLLKLGFQPDVVTYGTLMNGLC---------------KMITKGISPDIFTYNSLIHALC 684
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
L + ++ M N+ P+ + +S V+ LCK G A +V+D M + G PD+
Sbjct: 685 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 744
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T L+ GHC +E+D A+ F M+ K + ++LING+ +R++ A LL +M
Sbjct: 745 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 804
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGT 561
+ L T+ TLI L RL+ A+ L M P + + Y+ K
Sbjct: 805 SLQ-GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHH 863
Query: 562 VEDASEFLKAL 572
+ +A LKA+
Sbjct: 864 LAEAMVLLKAI 874
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 121/280 (43%), Gaps = 38/280 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + ++ ++ L + + +VV+ M K G E D+ TY + M++AVK+F
Sbjct: 707 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 766
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+ P+V+ ++L+ N Y
Sbjct: 767 DTMVHKGCVPNVRSYNILI------------------NGY-------------------C 789
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
++ R D+A +++ M G D +TY+ +I GLC GR + A + EM +G IPD+
Sbjct: 790 QIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLV 849
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ IL+ C + + A++ + N DAD + ++ I+G + A L +
Sbjct: 850 TYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 909
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
K L+P T+ +I L L+EA L R M + +
Sbjct: 910 SSK-GLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 102/235 (43%), Gaps = 38/235 (16%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L ++D ++ EM G D+ TY +S K R ++ A+ L
Sbjct: 324 NTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + + P +Q + ++ DG+ RA
Sbjct: 384 KAIEGSNWDPDIQ---------------------------------IYTTILDGMCRA-- 408
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + + G +P+ TY+ +I GLCK G +A + EM +NGC P+
Sbjct: 409 --GELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDC 466
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
T+ ++ +G NE R + +M+ + + D +L+ G LS ++ + K
Sbjct: 467 TYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV-GMLSDDGLDQSVK 520
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/509 (20%), Positives = 208/509 (40%), Gaps = 48/509 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K +P +T ++ ++R L + + + +M + TY +++ L K ++ +
Sbjct: 108 KLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVT 167
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWD--DKIGKKLEDMKIELSDNFV 235
+ A N F + + K I+ + V T ++ G +W + ++ D KI + D F
Sbjct: 168 E--AFNIFSEMITKGISPNIV--TYNSLIHGLCKLCEWKHVTTLMNEMVDSKI-MPDVFT 222
Query: 236 LTVLKELRIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFW 286
L + V AL V E H G + N +TYN ++ V
Sbjct: 223 LNTV-------VDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAV 275
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V + M + ++ +Y + + K + ++ A+ LFE M P+ + L+ +
Sbjct: 276 KVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGL 335
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ L + ++ + G Y + L K D+A ++KA++ + ++P
Sbjct: 336 CHVGR--LQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDP 393
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D Y+ ++ G+C+AG EDA ++ + G P++ T+ I+I G C + A F
Sbjct: 394 DIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLF 453
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++M + + +++ GFL +LL EM+ R + TL+ +L
Sbjct: 454 SEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEML--ARGFSVDVSTTTLLVGMLS 511
Query: 527 ARRLEEAMNLLRLMKKQNYPP-------FPEPF--------VQYISKFGTVEDA-SEFLK 570
L++++ + + P P F F T++DA S F +
Sbjct: 512 DDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNR 571
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
L + PS+ + ++ S + +HY
Sbjct: 572 MLHMHPPPSTVDFTKLLTS-IAKMKHYST 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 3/234 (1%)
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
F +++A+ F M+ PS D + LL SI+ + + ++ + +S G
Sbjct: 23 FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHH--STLLSLSRQMDSFGIPPDV 80
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ +L L R D A + + G +PD T++ +I GLC G+ +A ++ D+
Sbjct: 81 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G P++ T+ LI G C +V A F++M+ K + + LI+G
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+ EM++ ++ P T T+++ L + EA +++ +M + P
Sbjct: 201 WKHVTTLMNEMVDS-KIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEP 253
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 88/215 (40%), Gaps = 37/215 (17%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G N +YN ++ + + + ++E+M +G D TY + ++
Sbjct: 771 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 830
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ LF M ++S PDL + +R+ Y
Sbjct: 831 HAIALFHEM------------------VASGQIPDL-VTYRILLDY-------------- 857
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K EA ++KA++ + + D + Y+ I G+C+AG E A ++ + G
Sbjct: 858 ----LCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKG 913
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
PD++T+ I+I G C +D A F KM E +
Sbjct: 914 LQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEND 948
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 118/322 (36%), Gaps = 46/322 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + + + + EM K G + TY I+R F +
Sbjct: 425 GLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRT 484
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L E M+ + V +LL+ +S D GL V + L S S G
Sbjct: 485 IELLEEMLARGFSVDVSTTTLLVGMLS-----DDGLDQSVK---QILCKPSSSSRPSGTQ 536
Query: 381 -RALTKL----------------GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
R+L L D+A M + P + +++++ + K
Sbjct: 537 MRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKH 596
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ ++ +M+ G PD+ T ILI C + A AK+++ + D
Sbjct: 597 YSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGT 656
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+NG L +MI K + P T+ +LI L + LL M
Sbjct: 657 LMNG-------------LCKMITK-GISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 702
Query: 544 NYPPFPEPFVQYISKFGTVEDA 565
P + F TV DA
Sbjct: 703 KIMP-------NVVVFSTVVDA 717
>gi|125532572|gb|EAY79137.1| hypothetical protein OsI_34244 [Oryza sativa Indica Group]
Length = 508
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 184/402 (45%), Gaps = 24/402 (5%)
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI---------YPVKALGFF 253
A +V ++L + L++M+ +S+ V VL + + YP A FF
Sbjct: 111 ADRIVKILLQDGPGFNTRQALDEMRPRVSNALVREVLLKFVVSIDGVNRARYPRLAYKFF 170
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY----IKISR 309
W + GY+H T YN IL++ A ++ W ++E+M +G + T+ R
Sbjct: 171 LWAEDQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGR 230
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ R++E +K F Y+P + +L ++ +I L+ V K + G+
Sbjct: 231 AGLRRRLVERFIKSSNFN----YRPFRNSFNAILHTLLTIEQ--YSLIEWVHQKMIAEGH 284
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S Y+ + RA LG+ ++ K++ M G PD TY+ ++ L K + A N
Sbjct: 285 SPDVLTYNVVMRAKYMLGKLNQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALN 344
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+L+ M + GC+P + +T LI G A ++ F +M++K D V+I G++
Sbjct: 345 LLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYV 404
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ + A K +M+ + +L P T+ ++I L ++A +LL+ M+ + P
Sbjct: 405 AAGEFDEAQKFFDDMLLRGQL-PNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTP-- 461
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAA-YLQVFESF 590
F Y + + +A + +A ++ +Y ++ YL + F
Sbjct: 462 -NFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRF 502
>gi|115482834|ref|NP_001065010.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|31432949|gb|AAP54520.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|62733610|gb|AAX95727.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113639619|dbj|BAF26924.1| Os10g0506000 [Oryza sativa Japonica Group]
gi|125575336|gb|EAZ16620.1| hypothetical protein OsJ_32092 [Oryza sativa Japonica Group]
Length = 507
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 183/402 (45%), Gaps = 24/402 (5%)
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI---------YPVKALGFF 253
A +V ++L + L++M+ +S+ V VL + + YP A FF
Sbjct: 110 ADRIVKILLQDGPGFNTRQALDEMRPRVSNALVREVLLKFVVSIDGVNRARYPRLAYKFF 169
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY----IKISR 309
W E GY+H T YN IL++ A ++ W ++E+M +G + T+ R
Sbjct: 170 LWAEEQEGYRHGTSMYNLILKIFAECGELKAMWRLLEDMTDKGLPVSSRTFHLLVCTSGR 229
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ R++E +K F Y+P + +L ++ +I L+ V K + G+
Sbjct: 230 AGLRRRLVERFIKSSNFN----YRPFRNSFNAILHTLLTIEQ--YSLIEWVHQKMIAEGH 283
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S Y+ + RA L + D+ K++ M G PD TY+ ++ L K + A N
Sbjct: 284 SPDVLTYNVVMRAKYMLRKLDQFHKLLDEMGKNGLAPDLYTYNLLLHVLGKGDKPLAALN 343
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+L+ M + GC+P + +T LI G A ++ F +M++K D V+I G++
Sbjct: 344 LLNYMSDVGCVPTVLHFTNLIDGLSRAGNLEACKYFFDEMVKKGCQPDVVCYTVMITGYV 403
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ + A K +M+ + +L P T+ ++I L ++A +LL+ M+ + P
Sbjct: 404 AAGEFDEAQKFFDDMLLRGQL-PNVYTYNSMICGLCIVGEFDKACSLLKDMESRGCTP-- 460
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAA-YLQVFESF 590
F Y + + +A + +A ++ +Y ++ YL + F
Sbjct: 461 -NFTVYSTLVSRLRNAGKDSEANNIIQYMTNKGHYLHLLSRF 501
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 156/335 (46%), Gaps = 7/335 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ L R +V + + ++M+ G D TY + K R +A
Sbjct: 252 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 311
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP+V + L+ N D F++ + + G +K YD +
Sbjct: 312 KALLDEMSCAELKPNVVVYANLIDGFMREGNADE--AFKMIKEMVAAGVQPNKITYDNLV 369
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L K+G+ D A ++K M PD ITY+ +I G + +DA +L EME G
Sbjct: 370 RGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGIS 429
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++I+I G C + E ++A +M K +A + LI+G+ + V+ A ++
Sbjct: 430 PNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEI 489
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M KV + P + +LI L R+EE+ M+++ P + I +
Sbjct: 490 FDKMT-KVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYL 548
Query: 560 --GTVEDASEFL-KALSVKEYPSSAAYLQVFESFF 591
G +E A + + + L P+ Y+ + ES+F
Sbjct: 549 KNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYF 583
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 149/342 (43%), Gaps = 8/342 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G N TY+G++ ++ + +V+ M G + + YI + + K +
Sbjct: 529 QERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDI 588
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E F+ M+D + +L+ ++SS N + FRV + E G+ VY
Sbjct: 589 EKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN--MEAAFRVLSGIEKNGSVPDVHVYS 646
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K ++A ++ M G +P+ + Y+ +I GLCK+G A NV + +
Sbjct: 647 SLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAK 706
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P+ T+T LI G C ++ A + +M+ DA + VL G S + A
Sbjct: 707 GLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQA 766
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQ 554
L+ EM +R ++F L++ +++E + LL ++ + P E +
Sbjct: 767 MFLIEEMF--LRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIIS 824
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYL-QVFESFFNEGR 595
+S+ G + + L K S+A + +F N+G+
Sbjct: 825 GLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGK 866
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 3/286 (1%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ +TITYN I+ RH S +D + ++ EM+ G ++ TY + + E A
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L E M KP+ + L+ N + L + +K + Y+ +
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGN--VSLACEIFDKMTKVNVLPDLYCYNSLIF 510
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L+K+GR +E+ K M+ G P+ TYS +I G K G E A ++ M + G P
Sbjct: 511 GLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKP 570
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ + L++ + ++++++ F M+++ D + +LI+ S + A+++L
Sbjct: 571 NDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVL 630
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
IEK P + +LI L E+A +L M K+ P
Sbjct: 631 -SGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDP 675
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 96/191 (50%), Gaps = 5/191 (2%)
Query: 361 ANKYESLGNSLSKSVYDGIH----RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+++ L ++ S G H A K+ FD A+K++ M+ G + +TY+ +I
Sbjct: 206 GSQHSVLQRAVEGSAARGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIA 265
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLC++G E+A +ME+ G +PD T+ LI G C + + A +M
Sbjct: 266 GLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKP 325
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ + LI+GF+ + + A+K++ EM+ ++P + T+ L+ L +++ A L
Sbjct: 326 NVVVYANLIDGFMREGNADEAFKMIKEMV-AAGVQPNKITYDNLVRGLCKMGQMDRASLL 384
Query: 537 LRLMKKQNYPP 547
L+ M + ++ P
Sbjct: 385 LKQMVRDSHRP 395
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 120/279 (43%), Gaps = 13/279 (4%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L+ Y+ + L + G +EA K M++ G PD TY +I GLCK+ R +A
Sbjct: 252 GCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA 311
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+LDEM P++ + LI G D A +M+ + D L+ G
Sbjct: 312 KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRG 371
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++ A LL +M+ RP T+ +IE ++A LL M+ P
Sbjct: 372 LCKMGQMDRASLLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISP 430
Query: 548 FPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + + G E AS+ L+ ++ K P++ Y + + EG A ++
Sbjct: 431 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 490
Query: 604 YKCPH-HIRQDSKI--SLLFGSAKSNKVTIPSRKESTSF 639
K ++ D SL+FG +K +V +EST +
Sbjct: 491 DKMTKVNVLPDLYCYNSLIFGLSKVGRV-----EESTKY 524
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 108/271 (39%), Gaps = 23/271 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N + YN ++ L + + NV + +G + TY + K + +A
Sbjct: 672 GVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNA 731
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+ M+ P S+L SS + + + F + + L S S ++ +
Sbjct: 732 FYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAM-FLIEEMF--LRGHASISSFNNLV 788
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE---- 436
K G+ E K++ + G P+ +T +I GL +AG+ + + E+++
Sbjct: 789 DGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSE 848
Query: 437 ---------------NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G IP + +I+ HC +D+AL+ ++ K+
Sbjct: 849 SAARHFSSLFMDMINQGKIP-LDVVDDMIRDHCKEGNLDKALMLRDVIVAKSAPMGCSSY 907
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+++ + +++ A LL EM ++ L+P
Sbjct: 908 LAIVDNLCRKGKLSEALNLLKEMDKRGNLQP 938
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 54/305 (17%), Positives = 128/305 (41%), Gaps = 22/305 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G + Y+ ++ L + + +++EM K+G + +I Y + K +
Sbjct: 634 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDI 693
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A +F ++ P+ + L+ + D+ F + N+ + G + VY
Sbjct: 694 SYARNVFNSILAKGLVPNCVTYTSLIDGSCKVG--DISNAFYLYNEMLATGITPDAFVYS 751
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + G ++A +++ M G + +++ ++ G CK G+ ++ +L +
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFLRGHASIS-SFNNLVDGFCKRGKMQETLKLLHVIMGR 810
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA------------------D 479
G +P+ T +I G A ++ F ++ +K ++ A D
Sbjct: 811 GLVPNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLD 870
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++D +I + ++ A +L ++I +++ +++ L +L EA+NLL+
Sbjct: 871 VVDDMIRDHCKEGNLDKAL-MLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKE 929
Query: 540 MKKQN 544
M K+
Sbjct: 930 MDKRG 934
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 136/587 (23%), Positives = 240/587 (40%), Gaps = 75/587 (12%)
Query: 88 ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
+L T + + LR+ +D + +W + F PSS +Y +LR L S
Sbjct: 65 QLPQNFTPKQLRDALRR-QSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGS 123
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
L+ MK C I T+L ++ A F + A +V
Sbjct: 124 MRRVLQEMKHTGCEIRRGTFLILI---------ESYAKFELFDE-----------AVAVV 163
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
D++ +++ G KL+ + NF+L VL + + + R V G K +
Sbjct: 164 DIM-----EEEFGLKLD----AFTYNFLLNVLVDGNKLKLVEIVNSRMVSR--GIKPDVT 212
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N +++ L R +R ++EEM G D T+ + + F + M A+++ E M
Sbjct: 213 TFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQM 272
Query: 328 MDGPYKPSVQDCSLLLRS-------------ISSINN----PD----------LGLVFRV 360
+ S ++L+ I ++N PD L + V
Sbjct: 273 VAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332
Query: 361 ANKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+ E L L + Y+ + L KLG +EA +++ M F P+ +TY+ +
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I LCK + E+A + + G +PD+ T+ LIQG C N A+ F +M K
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGC 452
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D ++LI+ S+ R+ A LL EM E T+ TLI+ +R+EEA
Sbjct: 453 HPDEFTYNMLIDSLCSRGRLEEALSLLKEM-ESSGCSRNVVTYNTLIDGFCKNKRIEEAE 511
Query: 535 NLLRLMKKQ----NYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
+ M+ Q N + + + K VE+A++ + + ++ P Y +
Sbjct: 512 EIFDEMELQGISRNVVTY-NTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570
Query: 590 FFNEGRHYEAKDLLYKCPHHIRQDSKI---SLLFGSAKSNKVTIPSR 633
F G +A D++ + + + +L+ G +K+ +V + SR
Sbjct: 571 FCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASR 617
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 162/386 (41%), Gaps = 41/386 (10%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ G++ + T+N ++ L R V+ +++ M +EG++ DI TY + K +E
Sbjct: 309 NEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVE 368
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+AV++ M+ + P+ + L+ ++ N + +A S G ++
Sbjct: 369 EAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEAT--ELARVLTSKGILPDVCTFNS 426
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + L A ++ + MK G PD TY+ +I LC GR E+A ++L EME +G
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSG 486
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C ++ T+ LI G C ++ A F +M + + + LI+G +RV A
Sbjct: 487 CSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAA 546
Query: 499 KLLVEMI-EKVR---------------------------------LRPWQATFKTLIEKL 524
+L+ +M+ E ++ P T+ TLI L
Sbjct: 547 QLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGL 606
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSS 580
A R+E A LLR ++ + P+ + I + SE F + + + P +
Sbjct: 607 SKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDA 666
Query: 581 AAYLQVFESFFNEGRHY-EAKDLLYK 605
Y VF + G EA D L +
Sbjct: 667 VTYKVVFRGLCSGGGPIGEAVDFLVE 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 124/288 (43%), Gaps = 4/288 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+N +++ L + R + EEMK +G D TY + +E+A
Sbjct: 416 GILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + M +V + L+ N + + ++ E G S + Y+ +
Sbjct: 476 LSLLKEMESSGCSRNVVTYNTLIDGFC--KNKRIEEAEEIFDEMELQGISRNVVTYNTLI 533
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R +EA ++M M G +PD TY+ ++ C+AG + A +++ M NGC
Sbjct: 534 DGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCE 593
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T+ LI G A V+ A + K + +I +KR + A +L
Sbjct: 594 PDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRL 653
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM+EK P T+K + L G + EA++ L M + + P
Sbjct: 654 FREMMEKGD-PPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLP 700
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 114/245 (46%), Gaps = 5/245 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TYN ++ L ++ V + ++++M EG + D TY + F + +
Sbjct: 518 ELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDI 577
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A + + M +P L+ +S +L R+ + G L+ Y+
Sbjct: 578 KKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELA--SRLLRTVQLKGMVLAPQTYN 635
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEE 436
+ +AL + R EA ++ + M G PD +TY V GLC G +A + L EM +
Sbjct: 636 PVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTD 695
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G +PD ++ +L +G CA + D + ++M++ +D+++ +I GFL ++
Sbjct: 696 KGFLPDFSSFLMLAEGLCALSMEDTLIKLVNRVMKQANFSDSEV--SMIMGFLKIRKFQD 753
Query: 497 AYKLL 501
A L
Sbjct: 754 ALATL 758
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 155/332 (46%), Gaps = 14/332 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++H+ T+ ++ L R ++E MK+E E+ D ++ I R + + D
Sbjct: 44 NGFRHDHNTFGAMIHRLVSVNQFRPAEGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLD 103
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++F M D KP+ + + + N+ V R Y+ + +
Sbjct: 104 AIRVFHKMEDFQVKPTQKSYLTVFDILVEENH-----VKRAIGFYKEMREKGIPPTVVSL 158
Query: 380 HRALTKLGRFDE----AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + L + +E A ++ + M N G +PD+ TY +I GLCK G+ A +LDEME
Sbjct: 159 NILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLDEME 218
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E G P + ++T LI G C +N +D A+ +M+ + + L++G +
Sbjct: 219 EKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSGHSS 278
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +LL M+ + RL P T+ TLI L + EA+ +L M+ Q P + +
Sbjct: 279 QAMELLEVMVRR-RLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYGRI 337
Query: 556 ISKFGTV---EDASEFLKALSVKEY-PSSAAY 583
IS ++A+ F+ +++ P+ A++
Sbjct: 338 ISGLCAACNYQEAANFIDEMALGGISPNRASW 369
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 201/500 (40%), Gaps = 80/500 (16%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQF 148
PK S+V L K + D K F+ ++ FR + M+ LV+ + +
Sbjct: 10 PKQITNSLVEQLIKAEKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPA 69
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
L RMK++ C + E+ +L+I + + D A+ FH
Sbjct: 70 EGMLERMKQEDCEVTEDVFLTICRGYGRVHRPLD--AIRVFH------------------ 109
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNT 266
K+ED +++ + LTV L + +A+GF++ + E G
Sbjct: 110 -------------KMEDFQVKPTQKSYLTVFDILVEENHVKRAIGFYKEMRE-KGIPPTV 155
Query: 267 ITYNGILRVLARHE-SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
++ N +++ L ++E +V + + EM G + D TY + K + A +L +
Sbjct: 156 VSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLCKLGKISQAKELLD 215
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVAN-------KYESLGNSLSKS- 374
M + PSV + L+ + NN D + + N Y SL + L KS
Sbjct: 216 EMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNVFTYSSLMDGLCKSG 275
Query: 375 ----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
Y + L K G+ EA +++ M+ G +PD Y
Sbjct: 276 HSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEILDRMRLQGLKPDAGMYG 335
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT-------ILIQGHCAANEVDRALLC 465
++I GLC A +++A N +DEM G P+ +WT +++QG C + RA
Sbjct: 336 RIISGLCAACNYQEAANFIDEMALGGISPNRASWTFHVKMHNMVVQGLCNNVDPTRAFQL 395
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ M + + D L+ F + +N A ++L EMI + P + + L+ L
Sbjct: 396 YLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARILEEMILDGCI-PDEGMWNVLMCGLW 454
Query: 526 GARRLEEAMNLLRLMKKQNY 545
+++ E LL KQ +
Sbjct: 455 DRKKVRETTELLVAELKQKF 474
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 104/238 (43%), Gaps = 6/238 (2%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+++ V+ I R ++ R +A ++ M++ +P +Y V L + + A
Sbjct: 83 VTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDILVEENHVKRAIGF 142
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANE-VDRALLCFAKMMEKNYDADADLLDVLINGFL 489
EM E G P + + ILI+ C E V+ A F +M + D+ LING
Sbjct: 143 YKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPDSYTYGTLINGLC 202
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP-- 547
+++ A +LL EM EK L P ++ +LI L + L+EA+ LL M P
Sbjct: 203 KLGKISQAKELLDEMEEK-GLSPSVVSYTSLIHGLCQSNNLDEAIELLEEMIINGIEPNV 261
Query: 548 -FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G A E L+ + + P+ Y + EG+H EA ++L
Sbjct: 262 FTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEGKHREAVEIL 319
>gi|297827231|ref|XP_002881498.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327337|gb|EFH57757.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 756
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 164/377 (43%), Gaps = 43/377 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ + D+ E + V VL + AL FFRW +H+ T+ +++
Sbjct: 99 WTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLE-HALQFFRWTERSGLIRHDRDTHMKMIK 157
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+L + + ++ +M ++G D D ++ + + K +++++VK+F+ M D
Sbjct: 158 MLGEVQKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD----- 212
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
LG + Y+ + + + + GR+ A++
Sbjct: 213 --------------------------------LGVERTIKSYNTLFKVILRRGRYMMAKR 240
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M + G EP TY+ +++G + R E A D+M+ G PD T+ +I G+C
Sbjct: 241 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFDDMKTRGISPDAVTYNTIINGYC 300
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
++D A F +M N + +I G+LS RV+ ++ EM + P
Sbjct: 301 RFKKMDEAEKLFVEMKGNNSEPSVVTYTTMIKGYLSVDRVDDGLRIFEEM-RSFGIEPNA 359
Query: 515 ATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
T+ TL+ L ++ EA N+L+ +M K P F++ + SK G + A+E LK
Sbjct: 360 TTYSTLLPGLCDVGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK 419
Query: 571 ALSVKEYPSSAAYLQVF 587
A++ P+ A + V
Sbjct: 420 AMATLNVPAEAGHYGVL 436
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 99/237 (41%), Gaps = 3/237 (1%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ S Y+ I L G+ +AE + + + G + D + +I G K G E + +
Sbjct: 471 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPESSYEI 529
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L M G + + +LI+ + + E A M+E + D+ L +I
Sbjct: 530 LKIMSRRGVPREANAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSALFRSVIESLFE 589
Query: 491 QKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
RV A ++++ MI+K V + ++E LL +EEA+ + L+ + +
Sbjct: 590 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL 649
Query: 550 EPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + +S+ G A + L L ++Y +V ++ G+ A +L K
Sbjct: 650 DSLLSVLSEKGKTIAALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCK 706
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 115/279 (41%), Gaps = 13/279 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN I+ L + + ++ K G + D D + R K E + ++ + M
Sbjct: 475 AYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPESSYEILKIM 533
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
LL++S S P G + G+ +++ + +L + G
Sbjct: 534 SRRGVPREANAYELLIKSYMSKGEP--GDAKTALDSMVEDGHVPDSALFRSVIESLFEDG 591
Query: 388 RFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
R A ++M M KN G E + ++++ L G E+A +D + +NG D+ +
Sbjct: 592 RVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADLDS 651
Query: 446 WTILI--QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ +G A AL +E++ D D +++ L + AY +L +
Sbjct: 652 LLSVLSEKGKTIA-----ALKLLDFGLERDLSLDFSSYDKVLDALLGAGKTLNAYSVLCK 706
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
++EK W+++ LI+ L ++A L R++KK
Sbjct: 707 IMEKGSSTDWKSS-DELIKSLNQEGNTKQADVLSRMIKK 744
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 165/373 (44%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ITYN + L +++ V V++ M +EG++ D+ TY + K +E+A
Sbjct: 281 GFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEA 340
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + + L+ ++ + N + L +A + G S ++ +
Sbjct: 341 KGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEAL--DLARQVTVKGVSPDVYTFNILI 398
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G A ++ + MKN+G PD +TY+ +I LC G+ A ++L +ME GC
Sbjct: 399 NALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCP 458
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I G C ++ A F +M + +A + LI+G K+++ A+ L
Sbjct: 459 RSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGL 518
Query: 501 LVEMIEKVRLRPWQ-----------------------------------ATFKTLIEKLL 525
+ +MI + L+P T+ TLI L
Sbjct: 519 INQMISE-GLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLC 577
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
A R + A+ +LR M+ + P P+ P +Q + + + DA S F + V E P +
Sbjct: 578 KAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDAL 637
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 638 TYKIVFRGLCRGG 650
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 136/321 (42%), Gaps = 38/321 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ YN +L VL ++ +V EM G + D+ T+ + + + + A
Sbjct: 141 GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 200
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L++ + + RV + +G S +K + +
Sbjct: 201 VLMLEEMSSRGVAPDETTFTTLMQGF--VEEGSIEAALRVKARMLEMGCSATKVTVNVLI 258
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG----------------------- 417
KLGR ++A ++ GFEPD ITY+ + G
Sbjct: 259 NGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 318
Query: 418 ------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
LCK G+ E+A +L++M + GC+PDI T+ LI C N ++ AL
Sbjct: 319 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 378
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ K D ++LIN + A +L EM + P + T+ TLI+ L
Sbjct: 379 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEM-KNSGCTPDEVTYNTLIDNLC 437
Query: 526 GARRLEEAMNLLRLMKKQNYP 546
+L +A++LL+ M+ P
Sbjct: 438 SLGKLGKALDLLKDMESTGCP 458
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 43/373 (11%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT L+E + P AL + Y I+R L ++ +V EM++
Sbjct: 44 LLTALRE-QPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRR 102
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG+++ + ++ ++ +DAV L
Sbjct: 103 EGHQVKLGVVHSFLDSYEGQQLFDDAVDL------------------------------- 131
Query: 355 GLVFRVANKYESL-GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+ N+ + L G VY+ + L + + E + M G +PD +T++
Sbjct: 132 -----ILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNT 186
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ LC+A + A +L+EM G PD T+T L+QG ++ AL A+M+E
Sbjct: 187 LMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMG 246
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
A ++VLING+ RV A + + I P Q T+ T + L + A
Sbjct: 247 CSATKVTVNVLINGYCKLGRVEDALGYIQQEIAD-GFEPDQITYNTFVNGLCQNDHVGHA 305
Query: 534 MNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFES 589
+ ++ +M ++ + P + V + K G +E+A L + + P + + +
Sbjct: 306 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAA 365
Query: 590 FFNEGRHYEAKDL 602
R EA DL
Sbjct: 366 LCTGNRLEEALDL 378
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 177/467 (37%), Gaps = 56/467 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P T ++ +++ V + S++ RM E C + T ++ K + D AL
Sbjct: 214 PDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVED--AL 271
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---------NFVLT 237
+ D + T V G +D +G L+ M + + + N V+
Sbjct: 272 GYIQQEIADGFEPDQI--TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVN 329
Query: 238 VL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L K ++ K G + + G + T+N ++ L + + ++ ++ +G
Sbjct: 330 CLCKNGQLEEAK--GILNQMVDR-GCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKG 386
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D+ T+ + K A++LFE M + P + L+ ++ S+ LG
Sbjct: 387 VSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGK--LGK 444
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNA-------- 402
+ ES G S Y+ I L K R +EAE++ M +NA
Sbjct: 445 ALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLID 504
Query: 403 ---------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G +P+NITY+ ++ CK G + A ++L+ M NG
Sbjct: 505 GLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEV 564
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI G C A AL M K + ++ + + A L
Sbjct: 565 DVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLF 624
Query: 502 VEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EM E V P T+K + L G ++EA + + M + + P
Sbjct: 625 REMAE-VGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIP 670
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 3/193 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N IT+N ++ L + + + D + ++ +M EG + + TY I + K ++ A
Sbjct: 491 GISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKA 550
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ E M ++ V L+ + + L +V G + Y+ +
Sbjct: 551 ADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL--KVLRGMRIKGMRPTPKAYNPVL 608
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEENGC 439
++L + +A + + M G PD +TY V GLC+ G ++A + + EM + G
Sbjct: 609 QSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGF 668
Query: 440 IPDIKTWTILIQG 452
IP+ ++ +L +G
Sbjct: 669 IPEFSSFRMLAEG 681
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 217/514 (42%), Gaps = 33/514 (6%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P +++L ++ + + LR M ++ C +E +Y ++L L KA + + A+
Sbjct: 210 PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEE--AV 267
Query: 187 NQFHDGMVKEIAMDNVAKTLVD----VVLGSDWDDKIGK------KLEDMKIELSDNFVL 236
F D + + + + + V+LG +D+I + K+ + + D++
Sbjct: 268 RLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVS-PDSWSY 326
Query: 237 TVLKELRIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+L + K A F+ + HSG +T+ Y ++ L S D + +M
Sbjct: 327 GILIDGLAKAGKLNDARNLFQKL-LHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 385
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+ G TY + K M+E+A L + M++ + P V + ++ + + +
Sbjct: 386 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 445
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKL---------GRFDEAEKMMKAMKNAGF 404
L+ N+ E LG + ++ ++ I L + G+ DEA +++K M + G
Sbjct: 446 EALLL--FNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD +TYS +I GLC R +DA ++L++M + C P + T LI G C A + A
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M+ D + L++G + A +LL +M+ + L P T+ L+ L
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR-GLAPNVVTYTALVSGL 622
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSS 580
A RL EA + MK P + I F G V+ + F + + P
Sbjct: 623 CKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDH 682
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDS 614
Y + GR A ++L + +R ++
Sbjct: 683 VVYGTLAAELCKSGRSARALEILREGRESLRSEA 716
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 155/359 (43%), Gaps = 19/359 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVR---------DFWNVVEEMKKEGYEMDIDTYIKIS 308
E G N ++N I+ L + + + + +++ M +G+ D+ TY +
Sbjct: 455 ERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 514
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
++DA L E M+ KP+V + L+ + + V + S G
Sbjct: 515 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGR--IKEAREVLDAMVSSG 572
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S Y+ + + G+ + A +++ M G P+ +TY+ ++ GLCKA R +AC
Sbjct: 573 QSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEAC 632
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
V +M+ +GC P++ T+T LI G C+A +VD L F +M+ D + L
Sbjct: 633 GVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAEL 692
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
R A ++L E E +R W ++ ++ LL A ++E A+ +R M + P
Sbjct: 693 CKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 752
Query: 548 FPE---PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE--GRHYEAKD 601
PE V + K G +A L+ + Y A F E G+ YE +D
Sbjct: 753 APERCASLVAGLCKSGQGGEARAVLEEIMDLAYGGKARGKAA--KFVEEMVGKGYEIED 809
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 111/226 (49%), Gaps = 6/226 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
VY+ + +L+K + +KM++ M + G PD+ T++ ++ GLCKAG+ ++A V+DEM
Sbjct: 46 VYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEM 105
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
P T + L C ++RA +++E A++ ++++ RV
Sbjct: 106 RSRMIPPYFATSSFLAHELCLRGSMERAF----QLLEIMPVANSSAYNIVVVALCKAARV 161
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A +L M EK R+ + +++ L+ + R++EA+ + R +++ ++
Sbjct: 162 DDALELARTMSEK-RIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLE 220
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
G V+ A E L+A+ +E P +Y V + GR EA
Sbjct: 221 GFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEA 266
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 106/274 (38%), Gaps = 49/274 (17%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L+ D + L GR DEA ++ + + EP +T + ++ G C G+ + A +
Sbjct: 178 LAAGSLDSVLVGLMDSGRIDEALQVYRENRR---EPCLVTLNVLLEGFCSRGQVDKAREL 234
Query: 431 LDEMEENGCIPD-----------------------------------------IKTWTIL 449
L M + C PD ++ + I+
Sbjct: 235 LRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIV 294
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I G C + +D A+ F KM E+N D+ +LI+G ++N A L +++
Sbjct: 295 ILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS-G 353
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDAS 566
+ P + +LI L A ++A L M ++ PP P + + K G +E+A
Sbjct: 354 VTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEAC 413
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+ +K + + P Y V + R EA
Sbjct: 414 DLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEA 447
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 99/248 (39%), Gaps = 17/248 (6%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S Y+ + AL K R D+A ++ + M + V+ GL +GR ++A V E
Sbjct: 146 SAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
C + T +L++G C+ +VD+A M ++ D +++G R
Sbjct: 206 NRREPC---LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGR 262
Query: 494 VNGAYKL-----LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
V A +L L P + +I L R++EA+ + M ++N P
Sbjct: 263 VEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPD 322
Query: 549 PEPF---VQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESF-----FNEGRHYEA 599
+ + ++K G + DA F K L PS+ AY + F++ R A
Sbjct: 323 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 382
Query: 600 KDLLYKCP 607
CP
Sbjct: 383 DMNRRGCP 390
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 9/350 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + YN I+ L++ + + + E++ G + D T+ + K M +
Sbjct: 214 SGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTE 273
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A K F+ M+D P+ ++L+ N L +FR + L + + S +
Sbjct: 274 AAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF-- 331
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
IH L K GR EA K+ +K G PD TYS +I G CK G E A + DEM G
Sbjct: 332 IH-GLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+I + L+ G C + ++ RA F M EK + D+ +I+G+ + V A+
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYI 556
L EM K ++P + L+ +E+AMNL R M ++ + +
Sbjct: 451 SLFHEMPSK-GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 509
Query: 557 SKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K +++AS+ + + K+ P Y V + G+ EA +LL+K
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEA-NLLFK 558
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 137/312 (43%), Gaps = 7/312 (2%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G + TY I+ + + M +A FE M KP CS L+ +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF--MRE 58
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
D+ V R+ + S G ++ Y+ + L K G+ ++A +++K M G +P++ T+
Sbjct: 59 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTF 118
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+I G C+ A +LDEME+ +P ++ +I G C ++ A KM
Sbjct: 119 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 178
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ + LI G+ S+ R+ A +LL M + P + +I L A ++E
Sbjct: 179 SGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM-SCSGVAPDIFCYNAIISCLSKAGKME 237
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFL-KALSVKEYPSSAAYLQVF 587
EA L ++ + P F +I SK G + +A+++ + L P++ Y +
Sbjct: 238 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 297
Query: 588 ESFFNEGRHYEA 599
F G EA
Sbjct: 298 NGHFKAGNLMEA 309
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 137/335 (40%), Gaps = 30/335 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L + ++ + + M ++G E D TY + + K + +A
Sbjct: 390 GIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS-KSVYDGI 379
LF M +P + L+ + + + + +LS ++ DG
Sbjct: 450 FSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGY 509
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE--- 436
++ + EA ++ + M PD++TY+ VI CKAG+ E+A + EM+E
Sbjct: 510 CKSC----KIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNL 565
Query: 437 --------------NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
G PD T+ ++I HC + + A +++ K + D
Sbjct: 566 IVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHD 625
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+LI ++ + A KLL EM E + L+P A TL+ A +++EA + +K
Sbjct: 626 LLITALCKREDLTEASKLLDEMGE-LGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 684
Query: 543 QNYPPFPEPFVQYISKFGTV-----EDASEFLKAL 572
P + ++ G + EDA +K L
Sbjct: 685 LGLVPDTTTLIDLVN--GNLNDTDSEDARNLIKQL 717
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 161/397 (40%), Gaps = 28/397 (7%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
++ F+ +LK R+ +AL F + E G + TY+ ++ + V +
Sbjct: 325 VQTCSAFIHGLLKNGRVQ--EALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKAFE 381
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ +EM +G +I Y + K ++ A KLF+ M + +P S ++
Sbjct: 382 LHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYC 441
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
N + F + ++ S G VY+ + K G ++A + + M GF
Sbjct: 442 KSEN--VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-AT 498
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++++ +I G CK+ + ++A + EM +PD T+T +I HC A +++ A L F
Sbjct: 499 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 558
Query: 468 KMMEKNYDADADL-----------------LDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
+M E+N D ++I + + A+KL E++ K L
Sbjct: 559 EMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 618
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
LI L L EA LL M + P + F G +++A+
Sbjct: 619 TKG-TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATR 677
Query: 568 FLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + S+ P + + + N+ +A++L+
Sbjct: 678 VFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLI 714
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 106/261 (40%), Gaps = 18/261 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD------IDTYIK------IS 308
G + ++ YN ++ + + N+ EM ++G+ ID Y K S
Sbjct: 460 GVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEAS 519
Query: 309 RQFQKF---RMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ FQ+ ++M D V + ++D K +++ +LL + + N + VF + K
Sbjct: 520 QLFQEMIAKQIMPDHVT-YTTVIDWHCKAGKMEEANLLFKEMQE-RNLIVDTVFALFEKM 577
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ G + Y + A K EA K+ + G + +I LCK
Sbjct: 578 VAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDL 637
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A +LDEM E G P + + L++ A ++D A F + D L L
Sbjct: 638 TEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDL 697
Query: 485 INGFLSQKRVNGAYKLLVEMI 505
+NG L+ A L+ +++
Sbjct: 698 VNGNLNDTDSEDARNLIKQLV 718
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 149/327 (45%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L + L + VL VL + + FFRW G+ H TITY +L +L +
Sbjct: 187 LSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQF 246
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+++EM K G + +D + + F +++AV +FE M + V+ + L
Sbjct: 247 EMMVAIIQEMGKVG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFNCL 305
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L +++ N LG R ++ + S + Y + A EA ++ M
Sbjct: 306 LVALA---NEGLGREAR--QVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEML 360
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +PD + ++ +I GL + R +A + + M+ G P++ T+T+LI+ HC ++D
Sbjct: 361 EKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMD 420
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ CF +M E D L+ G+ + KR++ +L EM +K P T+ L
Sbjct: 421 MAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQK-GCPPDARTYNAL 479
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ L + ++A + + M K+ P
Sbjct: 480 IKLLTNRKMPDDAARIYKKMIKKGLEP 506
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 10/361 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 43 AXAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 102
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYES 366
K R + +E +++ Y S+ ++L+ + + LVF K+
Sbjct: 103 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKW-- 160
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S Y+ + +LG DE ++ AM+ +G +PD TYS +I GLCK +D
Sbjct: 161 -GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDD 219
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + DEM G +P+ T+T LI GHC VD A+ + +M+ + D + L+
Sbjct: 220 ANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVY 279
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + +N A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 280 GLCKKGDLNQAHGLIDEMXXK-GLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 338
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ IS G DA + L+ LSV P + Y + F +G ++ L
Sbjct: 339 LDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 398
Query: 603 L 603
L
Sbjct: 399 L 399
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 10/282 (3%)
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
++R+ P+ +W G + + ++YN ++ R + + + + M+ G + D
Sbjct: 146 DIRVAPLVFDAITKW-----GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMRASGVQPD 200
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFR 359
+ TY + K M+DA +LF+ M+ P+ + L+ DL + +++
Sbjct: 201 VYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYK 260
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
L + ++ Y+ + L K G ++A ++ M G +PD TY+ +I G C
Sbjct: 261 QMLSQXLLPDJIT---YNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKFTYTTLIDGCC 317
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K G + A M + D +T LI G C A +M+ D
Sbjct: 318 KEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREMLSVGLKPDTG 377
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
++IN F + V KLL EM + P T+ L+
Sbjct: 378 TYTMIINEFCKKGDVWKGSKLLKEMQRNGHV-PXVVTYNVLM 418
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + DJ TY + K + A
Sbjct: 231 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQA 290
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ + D R E++ L Y +
Sbjct: 291 HGLIDEMXXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENI--RLDDVAYTALI 348
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ NG +
Sbjct: 349 SGLCQEGRSXDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHV 408
Query: 441 PDIKTWTILIQG 452
P + T+ +L+ G
Sbjct: 409 PXVVTYNVLMNG 420
>gi|255660872|gb|ACU25605.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 484
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 169/362 (46%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K E L
Sbjct: 88 DSYGKEGIVQESVKMFQ-------------------------------------KMEELX 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETAN 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPP 547
+S +V+ A +L+ EM + ++P T+ TL+ L A ++ EA JL+ +M K P
Sbjct: 231 VSVDQVDDALRLVZEM-KGXGIKPNAITYSTLLPGLCNAEKMSEARVJLKEMMDKYLAPT 289
Query: 548 FPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYL-QVFESFFNEGRHYEAKDLL 603
F++ I K G ++ A++ LKA+ P+ A + + E+F G++ +A LL
Sbjct: 290 DNSIFMRLIXSHCKSGNLDAAADVLKAMIRLSVPTEAGHXGXLIENFCKVGQYDKAVKLL 349
Query: 604 YK 605
K
Sbjct: 350 DK 351
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 140/287 (48%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + T+ ++ L + V + ++E M +G E DI TY + +EDA
Sbjct: 246 GFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDA 305
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLFE + D K +V ++L+ D FR+ + G S Y+ +
Sbjct: 306 TKLFESLADRGIKLNVFSYNILINGYCKDQKIDE--AFRLFEEMRPKGLKPSTVTYNTLI 363
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL + GR A+K+ M+ G TY ++ GLCK G E+A ++ +++
Sbjct: 364 GALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHK 423
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I+ ++IL+ G C A +++ A F ++ + + D ++LING ++ ++ A KL
Sbjct: 424 PNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKL 483
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +M EK L P TF +I+ LL + EA+ LL M+ +N+ P
Sbjct: 484 LWQMEEKGCL-PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 529
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 42/350 (12%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + Y+ ++ L R +++ +EM+ G D+ TY + + + ++
Sbjct: 175 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE 234
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
M+D + P ++L+ DG
Sbjct: 235 VTWFLNLMVDRGFSPDAFTFTILI---------------------------------DG- 260
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K G+ EA+++++ M + G EPD +TY+ ++ GLC G+ EDA + + + + G
Sbjct: 261 ---LCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGI 317
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
++ ++ ILI G+C ++D A F +M K + LI RV A K
Sbjct: 318 KLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQK 377
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L VEM + +T+ L++ L LEEA++L + +KK + P E F + +
Sbjct: 378 LFVEMQTCGQFLKL-STYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGM 436
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ G +E+A + +S P + AY + N+G EA LL++
Sbjct: 437 CRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQ 486
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 103/225 (45%), Gaps = 37/225 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +T+TYN ++ L + VR + EM+ G + + TY + K +E+A
Sbjct: 351 GLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEA 410
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ + +KP+++ S+LL DG+
Sbjct: 411 IDLFQSIKKTEHKPNIEVFSILL---------------------------------DGMC 437
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RA G+ +EA K + G EPD I Y+ +I GLC G +A +L +MEE GC+
Sbjct: 438 RA----GKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
PD T+ ++IQ NE+ A+ +M +N+ D + +L+
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 119/250 (47%), Gaps = 10/250 (4%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + + +TYN ++ L + D + E + G ++++ +Y + + K + ++
Sbjct: 279 HKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKID 338
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKS 374
+A +LFE M KPS + L+ ++ R A K ++ G L S
Sbjct: 339 EAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR------VRTAQKLFVEMQTCGQFLKLS 392
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K G +EA + +++K +P+ +S ++ G+C+AG+ E+A DE+
Sbjct: 393 TYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEI 452
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+NG PD + ILI G C + A+ +M EK D+ +V+I L + +
Sbjct: 453 SKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEI 512
Query: 495 NGAYKLLVEM 504
+ A +LL EM
Sbjct: 513 HEAIQLLEEM 522
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 97/218 (44%), Gaps = 7/218 (3%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GFEPD +T + ++ G+ DA + DEM E G D KT+ ILI G C A + A
Sbjct: 72 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
+ K M+ N D ++I+ A + EMI + P + +L++
Sbjct: 132 IKLHEK-MKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMI-GAGILPDVVVYSSLMD 189
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-P 578
L RL+EA+ + M+ + + +S+ G ++ + FL + + + P
Sbjct: 190 GLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSP 249
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
+ + + + EG+ EA+ +L + HH ++ I
Sbjct: 250 DAFTFTILIDGLCKEGKVGEAQQIL-ELMHHKGKEPDI 286
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 157/327 (48%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ ++LS V+ VL+ + A FF W G+ +G+ HN+ TYN ++ VL R
Sbjct: 226 LDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQF 285
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
++ EM ++G + ++T+ + F + + AV +FE M + V + L
Sbjct: 286 ESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCL 344
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ L +E L + + ++ Y + ++ EA + M
Sbjct: 345 LDNLGRAK-----LGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMI 399
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF+PD I + ++ GL K + DA + + M+ G P+++T+TILI+ C ++
Sbjct: 400 DKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMK 459
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M++ DA + LI GF +QK+++ Y LL EM EK + T+ L
Sbjct: 460 EAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGR-TYNAL 518
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + + ++A+ + + M + P
Sbjct: 519 IKLMTNRQMPDDAVRIYKKMIQNGIQP 545
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 177/447 (39%), Gaps = 41/447 (9%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E L+E + L+H VV VL + + + A FF W K F +S Y+ M+ L
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL------KKAKKASDLAALNQFHDGM-V 194
+ L M E + ET+ + KKA +L F G+
Sbjct: 282 TRQFESMMGMLGEMGEKG-LLTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDT 340
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
+DN+ + K+GK+ + + +L D F LR Y V G+ R
Sbjct: 341 INCLLDNLGRA------------KLGKEAQALFEKLEDRFT----PNLRTYTVLLNGWCR 384
Query: 255 W-----VGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
G G+K + I ++ +L L + + D + E MK +G ++ T
Sbjct: 385 IKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRT 444
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + R K M++AV+ F+ M+D +P + L+ N + V+ + +
Sbjct: 445 YTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFG--NQKKMDKVYALLKE 502
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G Y+ + + +T D+A ++ K M G +P TY+ ++
Sbjct: 503 MKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTRN 562
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+E C V EM GC PD ++ + I G + A +M+EK A LD
Sbjct: 563 YEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQ--LD- 619
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRL 510
N F + G +L E+ K++
Sbjct: 620 -YNKFAADFSRAGKPDILEELARKMKF 645
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 180/433 (41%), Gaps = 69/433 (15%)
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
K +S+ V+T+LK + P A +F+ V + + + H T N +L +L + D
Sbjct: 93 KTSVSEEEVMTILKSISD-PNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMV 151
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQ-----------FQKFRMMEDAVKLFEFMMDGPYKPS 335
V + M+K+ ++ TY+ I + F +M E L + +G
Sbjct: 152 FVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGFILNAYSYNG----- 206
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
L+ + N L +V + S G S Y + AL + G + +
Sbjct: 207 -----LIHLLLPGFCNEAL----KVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNL 257
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
++ MK+ G P+ TY+ I L +A R +DA + EM++ GC PD+ T+T+LI CA
Sbjct: 258 LEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCA 317
Query: 456 ANEVDRALLCFAKM---------------MEK--------------------NYDADADL 480
A ++D+A + KM M+K Y D
Sbjct: 318 AGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVT 377
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+LI V+ A+ +L M K + P T+ T+I LL ARRL+EA+ LL M
Sbjct: 378 YTILIEALCKSGDVDRAFDMLDVMTTK-GIFPNLHTYNTMICGLLKARRLDEALELLENM 436
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGRH 596
+ P +V +I +G D ++ + + PS AA + GR
Sbjct: 437 ESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRI 496
Query: 597 YEAKDL---LYKC 606
EA+D+ L+KC
Sbjct: 497 SEAEDIFNDLHKC 509
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 146/347 (42%), Gaps = 42/347 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TY+ ++ L R R N++EEMK G +I TY R + R ++DA
Sbjct: 230 GMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDA 289
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F+ M D P V ++L+
Sbjct: 290 WGIFKEMDDEGCGPDVITYTVLI------------------------------------- 312
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL G+ D+A+++ M+ + PD +TY ++ K G E +EME +G
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI+ C + +VDRA M K + + +I G L +R++ A +L
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALEL 432
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYIS 557
L E +E + ++P ++ I+ + +A++ MKK+ P + ++
Sbjct: 433 L-ENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLA 491
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G + +A + L P S Y + + + G+ +A LL
Sbjct: 492 ETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLL 538
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 75/377 (19%)
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT---LVDVVLGSDWDDKI 219
++ L ++ VL K KKA D A N F D K + + ++ L+D +LGS++ +K
Sbjct: 759 DDHVMLPLIKVLCKRKKALD--AQNVF-DKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815
Query: 220 GKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
+ EDMK +G N TYN +L +
Sbjct: 816 LELFEDMK-------------------------------SAGTHPNNFTYNLLLDAHGKS 844
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
+ + +++ EM+ G E + T+ I K + A+ L+ +M G + P+
Sbjct: 845 KRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPT---- 900
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
Y + L K GR ++A K+ + M
Sbjct: 901 ---------------------------------PCTYGPLIDGLLKAGRSEQAMKIFEEM 927
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
+ G P+++ Y+ +I G K+G + AC + +M + G PD+K++TIL++ C +
Sbjct: 928 LDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRI 987
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A+ F ++ D D + +ING +R++ A L EM + + P T+
Sbjct: 988 DEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNR-GISPDLYTYNA 1046
Query: 520 LIEKLLGARRLEEAMNL 536
LI L A +++ A+ +
Sbjct: 1047 LILHLGIAGKVDVAVKM 1063
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 119/582 (20%), Positives = 229/582 (39%), Gaps = 86/582 (14%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
++ E V+ +L+ + +DP A ++F V F ++ + ML L + ++
Sbjct: 96 VSEEEVMTILKSI-SDPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRRIEDMVFVF 154
Query: 153 RRMKEDHCYIEEETYLSILGVLK-KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL 211
M++ Y TY++I L K AL + + V I L+ ++L
Sbjct: 155 DLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE--VGFILNAYSYNGLIHLLL 212
Query: 212 GSDWDD--KIGKKL--EDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
++ K+ K++ E MK + L V R K + + + G + N
Sbjct: 213 PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEM-KSIGLRPNIY 271
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEG-------YEMDID------------------ 302
TY +R L R + D W + +EM EG Y + ID
Sbjct: 272 TYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKM 331
Query: 303 ----------TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
TYI + +F K +E + + M Y P V ++L+ ++ +
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCK--SG 389
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D+ F + + + G + Y+ + L K R DEA ++++ M++ G +P +Y
Sbjct: 390 DVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYV 449
Query: 413 QVI-----------------------------------FGLCKAGRFEDACNVLDEMEEN 437
I + L + GR +A ++ +++ +
Sbjct: 450 LFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKC 509
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD T+ +L++ + A ++D+A ++M+ K + D +++ LIN RV+ A
Sbjct: 510 GLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAA 569
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+K+ + + ++L P T+ L+ L ++ +A+ L M + PP F +
Sbjct: 570 WKMFGRL-KNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLD 628
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGR 595
+SK V+ A + F + + P Y + EGR
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGR 670
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 128/277 (46%), Gaps = 4/277 (1%)
Query: 272 ILRVLARHESVRDFWNVVEEMKKE-GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
+++VL + + D NV ++ K G +++Y + E A++LFE M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P+ +LLL + + + ++ + ++ S G + ++ I AL K +
Sbjct: 826 GTHPNNFTYNLLLDAHGK--SKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLN 883
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A + + + F P TY +I GL KAGR E A + +EM + GC P+ + ILI
Sbjct: 884 KALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILI 943
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + E+D A F KM+++ D +L+ R++ A + E+ + L
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEEL-KLTGL 1002
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P ++ +I L +RRL+EA++L MK + P
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISP 1039
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 123/292 (42%), Gaps = 40/292 (13%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P KA+ F + + G + N L LA + + ++ ++ K G D TY
Sbjct: 461 PAKAIDTFETM-KKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYN 519
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ + + K ++ A +L M IS PD+ ++
Sbjct: 520 MLMKCYSKAGQIDKATQLLSEM------------------ISKGCEPDVMII-------- 553
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
NSL ++Y K GR D A KM +KN P +TY+ ++ GL K G+
Sbjct: 554 ---NSLINTLY--------KAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKIL 602
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A + M E+GC P+ T+ L+ + VD AL F +M N + D + +I
Sbjct: 603 KALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTII 662
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
G + + R++ A+ +M K L P T TLI ++ R+E+A+ ++
Sbjct: 663 YGLIREGRIDYAFWFFHQM--KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVV 712
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 186/429 (43%), Gaps = 56/429 (13%)
Query: 218 KIGKKLEDMKIE---LSDNFVLTVL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
K+ +L+++K+ ++ N +LT L KE +I +KAL F + E SG NTIT+N +L
Sbjct: 571 KMFGRLKNLKLAPTVVTYNILLTGLGKEGKI--LKALELFGSMTE-SGCPPNTITFNSLL 627
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTY-------IKISR---------QFQKF--- 314
L+++++V + M D+ TY I+ R Q +KF
Sbjct: 628 DCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSP 687
Query: 315 ---------------RMMEDAVKL-FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+EDA+K+ EF+ + + Q L+ I + + + F
Sbjct: 688 DYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISF 747
Query: 359 RVANKYESLGNSLSKS--VYDGIHRALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQVI 415
+ NS+ + V + + L K + +A+ + K KN G P +Y+ ++
Sbjct: 748 AEI----LVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLM 803
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GL + E A + ++M+ G P+ T+ +L+ H + +++ +++M + +
Sbjct: 804 DGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCE 863
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+A +++I+ + +N A L E++ P T+ LI+ LL A R E+AM
Sbjct: 864 PNAITHNIIISALVKSNNLNKALDLYYELMSG-DFSPTPCTYGPLIDGLLKAGRSEQAMK 922
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKE--YPSSAAYLQVFESF 590
+ M P + I+ FG ++ A E K + VKE P +Y + E
Sbjct: 923 IFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKM-VKEGIRPDLKSYTILVECL 981
Query: 591 FNEGRHYEA 599
GR EA
Sbjct: 982 CITGRIDEA 990
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 122/289 (42%), Gaps = 6/289 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + + N ++ L + V W + +K + TY + K + A
Sbjct: 545 GCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKA 604
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++LF M + P+ + LL +S + DL L ++ + + + Y+ I
Sbjct: 605 LELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLAL--KMFCRMTMMNCNPDVLTYNTII 662
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR D A MK PD +T +I G+ + GR EDA V+ E C+
Sbjct: 663 YGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACL 721
Query: 441 -PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD-LLDVLINGFLSQKRVNGAY 498
+ + W L++ E++ A + FA+++ N D ++ LI +K+ A
Sbjct: 722 QTNSQFWGELMECILTEAEIEEA-ISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQ 780
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + + + + P ++ L++ LLG+ E+A+ L MK P
Sbjct: 781 NVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHP 829
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 158/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAXILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + ++++ L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLM-----LSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 135/543 (24%), Positives = 235/543 (43%), Gaps = 28/543 (5%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V VL K+D + FF W ++ F S+ + ++
Sbjct: 77 WGPDAEKALEVLKLKVDHRLVHEVL-KIDVEINVKIQFFKWAGKRRNFEHDSSSFMALIH 135
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS-ILGVLKKAKKASDLAALNQFHDGMVKE 196
+L + W T++ M + YLS I+ +L KAK + AL+ F+ +K
Sbjct: 136 SLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNK--ALSVFYQ--IKG 191
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN---FVLTVLKELRIYPVKALG-- 251
A T ++L + + +K+ ++ E+ ++ F TV I LG
Sbjct: 192 RKCKPAATTYNSMILMLKQEGHL-EKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHY 250
Query: 252 -----FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
F + E+ Y I Y +L + + + V +V++EMK +G + + TY +
Sbjct: 251 DSAIRLFDEMKENGLYPTAKI-YTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTE 309
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYE 365
+ K ++DA ++F M+ KP V + L+ + + ++ L +FR ++
Sbjct: 310 WIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQ 369
Query: 366 SLGNSLSKSVYDGIHRALTKL-GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
N ++ Y+ + +AL + EA + MK G P + TYS +I G CK R
Sbjct: 370 CKPNVVT---YNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRI 426
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E A +L+EM+E G P + LI + A F ++ E + A + V+
Sbjct: 427 EKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVM 486
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I F R++ A L EM EK+ +P + L+ ++ A ++EA +LLR M +
Sbjct: 487 IKHFGKCGRLSEAVDLFNEM-EKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENG 545
Query: 545 YPP---FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P + +++ G + A E F K S P + +Y V + G EA
Sbjct: 546 CSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAA 605
Query: 601 DLL 603
L+
Sbjct: 606 KLM 608
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 187/433 (43%), Gaps = 43/433 (9%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ S++ +L++ + EK +N +C+ P + YS ++
Sbjct: 200 TYNSMILMLKQ-EGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFD 258
Query: 154 RMKEDHCYIEEETYLSILGV---LKKAKKASDLA-------------ALNQFHDGMVKEI 197
MKE+ Y + Y ++LG+ L K +KA D+ ++ G+ K
Sbjct: 259 EMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAG 318
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
+D+ + +D++ K G K + + I N ++ +L ++ V L FR +
Sbjct: 319 RVDDAYRVFLDMI-------KDGCKPDVVLI----NSLINILGKVGRLEV-TLKLFRKM- 365
Query: 258 EHSGYKHNTITYNGILRVLARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E K N +TYN +++ L ++ + + E+MK G TY + F K
Sbjct: 366 ESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNR 425
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-----ESLGNSL 371
+E A+ L E M + + P L+ S+ + + AN+ E+ G+S
Sbjct: 426 IEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKR------YEAANELFLELKENCGHS- 478
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S VY + + K GR EA + M+ G +PD Y+ ++ G+ +AG ++A ++L
Sbjct: 479 SARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLL 538
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+ENGC PD+ + I++ G DRA+ FAKM DA + ++
Sbjct: 539 RTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHA 598
Query: 492 KRVNGAYKLLVEM 504
A KL+ EM
Sbjct: 599 GLFEEAAKLMREM 611
>gi|225440005|ref|XP_002276355.1| PREDICTED: pentatricopeptide repeat-containing protein At2g37230
[Vitis vinifera]
Length = 763
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 166/362 (45%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV ++H+ T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 135 ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLI 194
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K + LG
Sbjct: 195 DSYGKAGIVQESVKVFQ-------------------------------------KMKELG 217
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ AM N G P TY+ +I+G + + E A
Sbjct: 218 VERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETAN 277
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+EM+E PD+ T+ +I G+ +++ A F +M +N + +I G+
Sbjct: 278 RFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGY 337
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ +L EM + ++P T+ TL+ L ++ EA N+++ M ++ P
Sbjct: 338 VSVGRVDDGLRLFEEM-KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ I+ K G ++ A++ LKA+ P+ A + V E+F G + A LL
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456
Query: 604 YK 605
K
Sbjct: 457 DK 458
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 222/545 (40%), Gaps = 97/545 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + L P+ H V VL N + A FF WV FR
Sbjct: 102 WTTRLQNSIRSLVPQFDHSLVWNVLHGSRNS-DHALQFFRWVERAGLFRH---------- 150
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
+ +T+L I+ +L +A K LN + I
Sbjct: 151 -------------------------DRDTHLKIIEILGRASK------LNH-----ARCI 174
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNF--VLTVLKELRIY-PVKALGFFR 254
+D K G +WD ED+ + L D++ V + ++++ +K LG R
Sbjct: 175 LLDMPKK-------GVEWD-------EDLFVLLIDSYGKAGIVQESVKVFQKMKELGVER 220
Query: 255 WVGEHSGYKHNTITYNGILRVL---ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+ +Y+ + +V+ R+ + ++N M EG TY + F
Sbjct: 221 TIK----------SYDALFKVILRRGRYMMAKRYFNA---MLNEGVMPTCHTYNIMIWGF 267
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+E A + FE M + P V + ++ I + F V K G ++
Sbjct: 268 FLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMK----GRNI 323
Query: 372 SKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+V Y + + +GR D+ ++ + MK+ G +P+ +TYS ++ GLC + +A N
Sbjct: 324 EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQN 383
Query: 430 VLDEMEENGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
V+ EM E P D + LI C A ++D A M+ + +A VLI F
Sbjct: 384 VVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENF 443
Query: 489 LSQKRVNGAYKLLVEMIEK-VRLRPWQ------ATFKTLIEKLLGARRLEEAMNLLR-LM 540
+ A KLL ++IEK + LRP + + +IE L + + +A L R LM
Sbjct: 444 CKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLM 503
Query: 541 KKQNYPPFP-EPFVQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYE 598
KK P ++ SK G E A E LK + +E P A AY + ESF +G +
Sbjct: 504 KKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPAD 563
Query: 599 AKDLL 603
AK L
Sbjct: 564 AKTAL 568
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ S++ + +L + GR A ++M M G + + ++++ L G E+A
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+D + NGC PD L+ CA + AL +E++Y+ + +++
Sbjct: 635 LGRIDLLMNNGCEPDFDG---LLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDA 691
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+ + AY +L ++++K W ++ K LI L ++A L R++K +
Sbjct: 692 LLTAGKTLNAYSILCKIMQKGGATDW-SSCKDLIRSLNEEGNTKQADILSRMIKGE 746
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 12/324 (3%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+E+S + V LK+L AL FFRW + G++++T +Y+ ++ L + + WN
Sbjct: 1 MEVSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 60
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+V +MK++G ++ +T+ ISR++ + R +++AV F M K D + LL ++
Sbjct: 61 LVTDMKQKGL-LNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLC 119
Query: 348 SINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA---MKNAG 403
+ LVF NK + + S ++ L G+ ++M+ MK+ G
Sbjct: 120 KSRQVERAQLVFDKMNKRGFVADIKSYTIL------LEGWGQEKNLSRLMEVYNEMKDEG 173
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
FEPD +TY +I CK+ R++DA + EME C P + LI G A + AL
Sbjct: 174 FEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEAL 233
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F + +A + ++ + +R++ + + EM K + P T+ ++
Sbjct: 234 EFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEM-RKGGVGPSARTYDIILHH 292
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP 547
L+ A + + A ++ + M + P
Sbjct: 293 LIRAGKTKIAYSVFQKMSCEGCQP 316
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 193/462 (41%), Gaps = 42/462 (9%)
Query: 88 ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
E+SP L E+ L+KL N A +FF W +K F+ S+ Y ++ +L
Sbjct: 2 EVSPSLVFEA----LKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNV 57
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
W + MK+ + +ET+ I +A+K VKE A+D K
Sbjct: 58 IWNLVTDMKQKG-LLNKETFALISRRYARARK--------------VKE-AVDAFMKM-- 99
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
+K G +KIE SD N +L L + R L F + G+ +
Sbjct: 100 ---------EKFG-----LKIESSDVNRLLDTLCKSRQVERAQLVFDKM--NKRGFVADI 143
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+Y +L + +++ V EMK EG+E D+ TY + K R +DA++LF
Sbjct: 144 KSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDVVTYGILINAHCKSRRYDDAIELFHE 203
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M KPS L+ + + L F +K + G Y+ + A
Sbjct: 204 MEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFELSK--ASGFVPEAPTYNAVVGAYCWS 261
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R D+ ++ + M+ G P TY ++ L +AG+ + A +V +M GC P + T+
Sbjct: 262 ERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSCEGCQPSVSTY 321
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
I+++ C + VD A+ + +M K + LIN + +++ A EM++
Sbjct: 322 EIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDEACMYFQEMLD 381
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
V +RP F L + LL + + + R + K P
Sbjct: 382 -VGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRKAPL 422
>gi|297741611|emb|CBI32743.3| unnamed protein product [Vitis vinifera]
Length = 772
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 166/362 (45%), Gaps = 43/362 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV ++H+ T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 135 ALQFFRWVERAGLFRHDRDTHLKIIEILGRASKLNHARCILLDMPKKGVEWDEDLFVLLI 194
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VK+F+ K + LG
Sbjct: 195 DSYGKAGIVQESVKVFQ-------------------------------------KMKELG 217
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ AM N G P TY+ +I+G + + E A
Sbjct: 218 VERTIKSYDALFKVILRRGRYMMAKRYFNAMLNEGVMPTCHTYNIMIWGFFLSLKVETAN 277
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+EM+E PD+ T+ +I G+ +++ A F +M +N + +I G+
Sbjct: 278 RFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMKGRNIEPTVISYTTMIKGY 337
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+S RV+ +L EM + ++P T+ TL+ L ++ EA N+++ M ++ P
Sbjct: 338 VSVGRVDDGLRLFEEM-KSFGIKPNAVTYSTLLPGLCDGEKMLEAQNVVKEMVERYIAPK 396
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLL 603
F++ I+ K G ++ A++ LKA+ P+ A + V E+F G + A LL
Sbjct: 397 DNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENFCKSGVYDRAVKLL 456
Query: 604 YK 605
K
Sbjct: 457 DK 458
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 138/545 (25%), Positives = 222/545 (40%), Gaps = 97/545 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + L P+ H V VL N + A FF WV FR
Sbjct: 102 WTTRLQNSIRSLVPQFDHSLVWNVLHGSRNS-DHALQFFRWVERAGLFRH---------- 150
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
+ +T+L I+ +L +A K LN + I
Sbjct: 151 -------------------------DRDTHLKIIEILGRASK------LNH-----ARCI 174
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNF--VLTVLKELRIY-PVKALGFFR 254
+D K G +WD ED+ + L D++ V + ++++ +K LG R
Sbjct: 175 LLDMPKK-------GVEWD-------EDLFVLLIDSYGKAGIVQESVKVFQKMKELGVER 220
Query: 255 WVGEHSGYKHNTITYNGILRVL---ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+ +Y+ + +V+ R+ + ++N M EG TY + F
Sbjct: 221 TIK----------SYDALFKVILRRGRYMMAKRYFNA---MLNEGVMPTCHTYNIMIWGF 267
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+E A + FE M + P V + ++ I + F V K G ++
Sbjct: 268 FLSLKVETANRFFEEMKERRISPDVVTYNTMINGYYRIKKMEEAEKFFVEMK----GRNI 323
Query: 372 SKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+V Y + + +GR D+ ++ + MK+ G +P+ +TYS ++ GLC + +A N
Sbjct: 324 EPTVISYTTMIKGYVSVGRVDDGLRLFEEMKSFGIKPNAVTYSTLLPGLCDGEKMLEAQN 383
Query: 430 VLDEMEENGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
V+ EM E P D + LI C A ++D A M+ + +A VLI F
Sbjct: 384 VVKEMVERYIAPKDNSIFMRLITCQCKAGQLDAAADVLKAMIRLSIPTEAGHYGVLIENF 443
Query: 489 LSQKRVNGAYKLLVEMIEK-VRLRPWQ------ATFKTLIEKLLGARRLEEAMNLLR-LM 540
+ A KLL ++IEK + LRP + + +IE L + + +A L R LM
Sbjct: 444 CKSGVYDRAVKLLDKLIEKEIILRPQNSLEMESSGYNLIIEYLCNSGQTSKAETLFRQLM 503
Query: 541 KKQNYPPFP-EPFVQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYE 598
KK P ++ SK G E A E LK + +E P A AY + ESF +G +
Sbjct: 504 KKGVQDPIAFNNLIRGHSKEGAPESAFEILKIMGRREVPREADAYRLLIESFLKKGEPAD 563
Query: 599 AKDLL 603
AK L
Sbjct: 564 AKTAL 568
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ S++ + +L + GR A ++M M G + + ++++ L G E+A
Sbjct: 575 GHIPDSSLFRSVMESLFEDGRIQTASRVMNNMVEKGVKENMDLVAKILEALLLRGHVEEA 634
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+D + NGC PD L+ CA + AL +E++Y+ + +++
Sbjct: 635 LGRIDLLMNNGCEPDFDG---LLSVLCAKGKTIAALKLLDFGLERDYNISFSSYENVLDA 691
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+ + AY +L ++++K W ++ K LI L ++A L R++K +
Sbjct: 692 LLTAGKTLNAYSILCKIMQKGGATDW-SSCKDLIRSLNEEGNTKQADILSRMIKGE 746
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 178/398 (44%), Gaps = 15/398 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + +++ V V+K VK + FFRW + Y+H+T TY ++R
Sbjct: 69 WGPDAEKALEVLMLKVDHWLVREVMKTDVGVNVK-MQFFRWAAKKRNYEHDTSTYMALIR 127
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS---RQFQKFRMMEDAVKLFEFMMDGP 331
L E + W +++EM + + + T +++S R +M+ AV +F +
Sbjct: 128 CLEVVEQYGEMWKMIQEMVRN--PVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRK 185
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD 390
+P+ Q + ++ I ++ V + N+ + G+ +V Y + A KLGR D
Sbjct: 186 CQPTAQAYNSMI--IMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQD 243
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A +++ MK+ G +P Y+ +I K A + +EM C PD+ T+T LI
Sbjct: 244 SAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELI 303
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
+G A D A F +M + D +++ +IN R++ A KL EM ++
Sbjct: 304 RGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM-GTLQC 362
Query: 511 RPWQATFKTLIEKLLGAR-RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDAS 566
P T+ T+I+ L ++ R+ E + MK P P + I F E A
Sbjct: 363 IPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAM 422
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
L+ + K + P AAY + ++ R+ A +L
Sbjct: 423 MLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELF 460
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 128/558 (22%), Positives = 219/558 (39%), Gaps = 87/558 (15%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V V+ K D FF W K+ + ++ Y ++R
Sbjct: 69 WGPDAEKALEVLMLKVDHWLVREVM-KTDVGVNVKMQFFRWAAKKRNYEHDTSTYMALIR 127
Query: 138 NLVNKDSLKQFWVTLRRM-KEDHCYIEEETYLSILGVLKKAKKASDLAA----------- 185
L + + W ++ M + C + I+ +L AK S A
Sbjct: 128 CLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMISKAVAIFYQIKVRKCQ 187
Query: 186 ----------LNQFHDGMVKEI-----AMDNVAKTLVDVVLGSDWDD---KIGKKLEDMK 227
+ H+G +++ M N D V S K+G++ ++
Sbjct: 188 PTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIR 247
Query: 228 I--ELSDNFVLTVLKELRIYPV------------KALGFFRWVGEHSGYKHNTITYNGIL 273
+ E+ DN + K IY + ALG F + H + + TY ++
Sbjct: 248 LLNEMKDNGMQPTAK---IYTMLIALFFKLNNVHGALGLFEEM-RHQYCRPDVFTYTELI 303
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
R L + + +N EM++EG D + K ++DAVKLFE M
Sbjct: 304 RGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCI 363
Query: 334 PSVQDCSLLLRS-------ISSINN-----PDLGLV------------FRVANKYESL-- 367
PSV + ++++ IS I++ G+ F N+ E
Sbjct: 364 PSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMM 423
Query: 368 --------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
G + Y + AL K R+D A ++ + +K Y+ +I L
Sbjct: 424 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLG 483
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KAGR +DA N+ DEM + GC P++ + L+ G A +D AL +M E D +
Sbjct: 484 KAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDIN 543
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++++NG + A ++L M ++ ++P ++ T++ + A EEA +L
Sbjct: 544 SYNIILNGLAKTGGPHRAMEMLSNM-KQSAIKPDAVSYNTVLGAMSHAGLFEEAA---KL 599
Query: 540 MKKQNYPPFPEPFVQYIS 557
MK+ N F + Y S
Sbjct: 600 MKEMNVLGFEYDLITYSS 617
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 71/340 (20%), Positives = 134/340 (39%), Gaps = 24/340 (7%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
RP Y+ ++R L + + M+ + C + +++ L KA + D A
Sbjct: 293 RPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDD--A 350
Query: 186 LNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWD-DKIGKKLEDMKIE-----------LSD 232
+ F + G ++ I T++ + S +I E MK L D
Sbjct: 351 VKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILID 410
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
F T E KA+ + E G+ Y ++ L + + + +E+
Sbjct: 411 GFCKTNRTE------KAMMLLEEMDE-KGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K+ Y + + K ++DAV LF+ M P+V + L+ ++
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGML 523
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D L + + G + Y+ I L K G A +M+ MK + +PD ++Y+
Sbjct: 524 DEALT--TMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYN 581
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
V+ + AG FE+A ++ EM G D+ T++ +++
Sbjct: 582 TVLGAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEA 621
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 14/159 (8%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y +++ L + + D N+ +EM K G ++ Y + + M+++A+ M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDGIHR 381
+ P + +++L ++ P + E L N ++ Y+ +
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAM--------EMLSNMKQSAIKPDAVSYNTVLG 585
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A++ G F+EA K+MK M GFE D ITYS ++ + K
Sbjct: 586 AMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 12/351 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +T+ +L + D + +++ G+ ++ TY + K R + A
Sbjct: 147 GFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHA 206
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
V++F M D +P+V + L+ + I D + R K N ++ + +
Sbjct: 207 VEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT---FTAL 263
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K+G+ EA+++ K M PD TY+ +I GLC GR ++A + ME NG
Sbjct: 264 IDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGY 323
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ T+T LI G C + V+ F +M +K A+ VLI G+ R + A +
Sbjct: 324 YPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQE 383
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ----NYPPFPEPFVQY 555
+ +M + R P T+ L++ L +E+A+ + + M+K+ N + +Q
Sbjct: 384 VFNQMGSR-RAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTY-TIIIQG 441
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA + +L K P+ Y + F G +EA D L+K
Sbjct: 442 MCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEA-DALFK 491
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/321 (23%), Positives = 139/321 (43%), Gaps = 18/321 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N +TY ++ L ++ + + +M G ++ TY + + DA
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDA 241
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L MM +P+V + L+ + + G + Y+ + + SVY +
Sbjct: 242 AWLLRDMMKRGIQPNVITFTALIDAFVKV-----GKIMEAKELYKVM---IQMSVYPDVF 293
Query: 381 ------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L GR DEA +M M++ G+ P+ +TY+ +I G CK+ R ED + EM
Sbjct: 294 TYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEM 353
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G + + T+T+LIQG+C D A F +M + D +VL++G V
Sbjct: 354 SQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYV 413
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A ++ + + K + T+ +I+ + ++E+A +L + + P +
Sbjct: 414 EKAL-MIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTT 472
Query: 555 YISKF---GTVEDASEFLKAL 572
IS F G + +A K +
Sbjct: 473 MISGFCRRGFIHEADALFKKM 493
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 138/308 (44%), Gaps = 11/308 (3%)
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y KI R +A+ LF M+ PS+ D + LL I+ + D+ V + +
Sbjct: 50 YRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDV--VISLFEQ 107
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ LG S + + + + + A + M GFEPD +T++ ++ G C R
Sbjct: 108 MQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNR 167
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
EDA + D++ G P++ T+T LI C ++ A+ F +M + + +
Sbjct: 168 IEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNS 227
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L++G R + A LL +M+++ ++P TF LI+ + ++ EA L ++M +
Sbjct: 228 LVSGLCEIGRWSDAAWLLRDMMKR-GIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQM 286
Query: 544 NYPPFPEPF-----VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHY 597
+ +P+ F + + +G +++A + + S YP+ Y + F R
Sbjct: 287 SV--YPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVE 344
Query: 598 EAKDLLYK 605
+ + Y+
Sbjct: 345 DGTKIFYE 352
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 151/369 (40%), Gaps = 37/369 (10%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEET 166
N E A A F+ + FRP+ Y+ ++ L L +M ++ T
Sbjct: 166 NRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVT 224
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLED 225
Y S++ L + + SD A L D M + I + + T L+D + K+GK +E
Sbjct: 225 YNSLVSGLCEIGRWSDAAWL--LRDMMKRGIQPNVITFTALIDAFV------KVGKIMEA 276
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
++ V+ ++ +YP + TY ++ L + + +
Sbjct: 277 KEL-------YKVMIQMSVYP------------------DVFTYTALINGLCTYGRLDEA 311
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ M+ GY + TY + F K + +ED K+F M + ++L++
Sbjct: 312 RQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQG 371
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ PD+ V N+ S Y+ + L G ++A + K M+ +
Sbjct: 372 YCLVGRPDVAQ--EVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMD 429
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
+ +TY+ +I G+CK G+ EDA ++ + G P++ T+T +I G C + A
Sbjct: 430 INIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADAL 489
Query: 466 FAKMMEKNY 474
F KM E +
Sbjct: 490 FKKMKEDGF 498
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 211/520 (40%), Gaps = 54/520 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK------- 179
P+ Y++++R L + L++ + M+ C TY +++ +A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 180 ----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+L N +G+ K M+ K ++V + + +
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-----REGLAPDVVSYNTL 264
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
LS + L E +L F + + G + +T+ ++ + ++ +V
Sbjct: 265 LSGYCKVGCLHE-------SLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M++ G M+ T+ + F K ++DA+ E M +PSV + L+ +
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
DL + + E+ Y I K+G D A ++ + M G PD I
Sbjct: 377 GRMDLAR--ELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TYS +I GLC+ R DAC + + M + G PD T+T LI GHC V++AL +M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-----------IEKVRLRPWQATFK 518
+ K D VLING R A++LL ++ + + L +A FK
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 519 TLIEKLLG---ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
+++ L G ++EA + + M +N+ + I + G V A F K +
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEA----KDLLYKCP 607
+ P+S + + + F EG EA +DLL CP
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 150/349 (42%), Gaps = 13/349 (3%)
Query: 261 GYKHNTITYNGILRVL--ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY + YN +L L A S R F + M + G ++ TY + R +E
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRF---LSSMLRHGVAPNVYTYNILVRALCARGRLE 169
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YD 377
+AV + M P+ + L+ + +L RV + GN+ V ++
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG--ELDGAERVVSLMREEGNAKPNLVTFN 227
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K GR + A K+ M G PD ++Y+ ++ G CK G ++ V EM +
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD+ T+T LI C A +++A+ A+M E+ + LI+GF + ++ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
L VE + K ++P + LI R++ A L+R M+ + P + IS
Sbjct: 348 L-LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406
Query: 558 ---KFGTVEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G ++ A + K L P + Y + E R +A +L
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TYN L L R + D V EEM G D+ TY + F R + A +LF
Sbjct: 191 NVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M+ +P N+++ Y+ + L
Sbjct: 251 EAMISRGCRP----------------------------------NAVT---YNCLLHGLC 273
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K + DEA ++ + M G +PD +TY+ +++G C G+ E A V DEM G PD+
Sbjct: 274 KESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 333
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ L++G A + A F M+ + D +++I+G KR++ A ++ M
Sbjct: 334 AYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ P T+ +LI L G +RL EAM + + + + P P F
Sbjct: 394 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 441
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 137/286 (47%), Gaps = 12/286 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T + +++ L + V +++E M K GY D+ T+ + + K +++A + +
Sbjct: 51 TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQ-G 109
Query: 328 MDGPYKPSVQDC---SLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVY-DGIHR 381
M+ C + LL S+ + + + ++ + + +S S+ DG +
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ +LGR AEK+ K M + P+ TY+ + GL + GR DA V +EM GC P
Sbjct: 170 -IDELGR---AEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSP 225
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T++ LI G A + D+A F M+ + +A + L++G + + + A++L
Sbjct: 226 DVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF 285
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+M+E+ P + T+ TL+ ++E+A+ + M + + P
Sbjct: 286 RKMVER-GCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDP 330
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 97/200 (48%), Gaps = 7/200 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN +L L + + + +M + G + D TY + F +E A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSVY-DG 378
V++F+ M+ + P V + LL+ P + +F+V E +++S ++ DG
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376
Query: 379 IHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
L+K R D+A ++ + M ++ G PD +TY+ +IFGLC R +A V E++
Sbjct: 377 ----LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRL 432
Query: 438 GCIPDIKTWTILIQGHCAAN 457
PD + +L++ AA
Sbjct: 433 KLSPDPHAFNVLLEAMYAAG 452
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 108/297 (36%), Gaps = 76/297 (25%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-------- 434
L K GR D A +++ M G+ PD T+S +I LCKA + ++A L M
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRA 118
Query: 435 ------------------------------EENGCIPDIKTWTILIQGHCAANEVDRALL 464
E +PD+ +++ILI G C +E+ RA
Sbjct: 119 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEK 178
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV---------------- 508
+ +M++ N + + +NG + + R+ A + EMI
Sbjct: 179 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFS 238
Query: 509 ------------------RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
RP T+ L+ L + +EA L R M ++ P
Sbjct: 239 LARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKV 298
Query: 551 PFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + F G +E A E + K + P AY + + FF G+ EA+ L
Sbjct: 299 TYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLF 355
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 99/232 (42%), Gaps = 11/232 (4%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNI---TYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K G+ ++A + + M+ + T VI LCKAGR + A ++L+ M + G
Sbjct: 20 GLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMIKRG 79
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL---DVLINGFLSQKRVN 495
PD+ T ++LI C A+++ A F + M + A + L+N K+V+
Sbjct: 80 YCPDMATHSMLINELCKADKIQEAQE-FLQGMNRTISTRASSCFSYNSLLNSLCKAKKVH 138
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPF 552
A+ + M+ + + P ++ LI+ L A L + M N P F
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 198
Query: 553 VQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + G + DA + + +S P Y + F +H +A +L
Sbjct: 199 LNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELF 250
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 63/138 (45%), Gaps = 4/138 (2%)
Query: 407 DNITYSQVIFGLCKAGRFE---DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+N+ ++ + GLCK+G+ E +AC + E + P T +IQ C A VD AL
Sbjct: 10 NNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSAL 69
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA-TFKTLIE 522
M+++ Y D +LIN ++ A + L M + R ++ +L+
Sbjct: 70 SLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLN 129
Query: 523 KLLGARRLEEAMNLLRLM 540
L A+++ +A + M
Sbjct: 130 SLCKAKKVHQAFAIFSTM 147
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + N++ +M+K E D+ Y + K+R ++DA
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF M + +P V S L+ + + R ++ L + L + +
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYG--------RWSDASRLLSDMLERKINPNVV 311
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + A K G+ EAEK+ M +P+ +TY+ +I G C R ++A + M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C+PD+ T+ LI G C A +V + F M + + LI+GF
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A + +M+ + P T+ TL++ L +LE+AM + ++K P +
Sbjct: 432 DNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + K G VED + +LS+K P AY + F +G EA L K
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 7/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + +T N +L + + +V++M + GY+ D T+ + + +A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L E M+ +P + ++ + PDL L + NK E +Y +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL--NLLNKMEKGKIEADVVIYSTVI 247
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + M N G PD TYS +I LC GR+ DA +L +M E
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI ++ A F +M++++ D + + LINGF R++ A ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
M+ K L P T+ TLI A+++ + M L R M ++ + I F
Sbjct: 368 FTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 561 TVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGR 595
D F + +S +P+ Y + + G+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ A+ + + + +EM + + +I TY + F +++A ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
M+ P V + L+ G+ +FR ++ +GN+++ Y +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT---YTTLIHGF 425
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ E A V + ++++ PDI
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+ +G C A +V+ F + K D + +I+GF + AY L ++
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 504 MIEKVRLRPWQATFKTLI 521
M E L P T+ TLI
Sbjct: 546 MKEDGPL-PDSGTYNTLI 562
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 139/336 (41%), Gaps = 42/336 (12%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR +++AV LF M+ PS+ + S LL +I+ + DL + F K E
Sbjct: 35 KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISF--GEKME 92
Query: 366 SLGNSLSKSVYD----------------GIHRALTKLG-------------------RFD 390
LG S + Y+ I + KLG R
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA ++ M G++PD +T++ ++ GL + + +A +++ M GC PD+ T+ +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C E D AL KM + +AD + +I+ + V+ A L EM K +
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GI 271
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
RP T+ +LI L R +A LL M ++ P F I F G + +A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + P+ Y + F R EA+ +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ + + V D + +M + G + TY + F + ++A +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQKSKMEPDIYTYNIMSE 493
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +PD I Y+ +I G CK G E+A + +M+E+G +P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 442 DIKTWTILIQGH 453
D T+ LI+ H
Sbjct: 554 DSGTYNTLIRAH 565
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S + ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ T+T LI GHC V A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A+ + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+D P+ + L+ N + L + + S S Y+ +
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDG--HCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENGC 439
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIR 343
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+ D+ +T LI G C A +M+ + ++IN F + V K
Sbjct: 344 LDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 500 LLVEM 504
LL EM
Sbjct: 403 LLKEM 407
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++ V + ++M + D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ + + L +R E++ L Y +
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENI--RLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G
Sbjct: 353 ISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGY 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPSVVT 418
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 163/389 (41%), Gaps = 52/389 (13%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + + + V V+K VK + FFRW + Y+H+T TY ++
Sbjct: 1063 WGPDAEKALEVLMLRVDHWLVREVMKTDVGVNVK-MQFFRWAAKRRNYEHDTSTYMALIH 1121
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIK-ISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L E + W +++EM + + T + + R +M+ A+ +F Y+
Sbjct: 1122 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIF-------YQ 1174
Query: 334 PSVQDCSLLLRSISSI-----NNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLG 387
+ C + ++ +S+ + V ++ N+ + G+ +V Y + A KLG
Sbjct: 1175 IKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLG 1234
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R D A +++ MK G +P Y+ +I K A ++ +EM C PD+ T+T
Sbjct: 1235 RRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 1294
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI+G A +D A F +M + D ++ +IN R++ A KL EM E
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM-ET 1353
Query: 508 VRLRPWQATFKTLIEKLLGAR------------------------------------RLE 531
+R P T+ T+I+ L ++ R+E
Sbjct: 1354 LRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRME 1413
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+AM LL M ++ +PP P + I G
Sbjct: 1414 KAMMLLEEMDEKGFPPCPAAYCSLIDALG 1442
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 107/241 (44%), Gaps = 3/241 (1%)
Query: 265 NTITYNGILRVLARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN I++ L +S + + E MK+ G TY + F K ME A+ L
Sbjct: 1359 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 1418
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E M + + P L+ ++ DL K E+ G+S S VY + + L
Sbjct: 1419 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK-ENCGSS-SARVYAVMIKHL 1476
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K GR D+A M M G PD Y+ ++ GL + G ++A + + M+E+GCIPDI
Sbjct: 1477 GKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDI 1536
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ I++ G RA+ + M + D + ++ A KL+ E
Sbjct: 1537 NSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKE 1596
Query: 504 M 504
M
Sbjct: 1597 M 1597
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 116/553 (20%), Positives = 210/553 (37%), Gaps = 98/553 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L ++ H V V+ K D FF W ++ + ++ Y ++
Sbjct: 1063 WGPDAEKALEVLMLRVDHWLVREVM-KTDVGVNVKMQFFRWAAKRRNYEHDTSTYMALIH 1121
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS----ILGVLK------------KAKKAS 181
L + + W ++ M + + T LS +LG K K +K
Sbjct: 1122 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRMLGNAKMVRQAITIFYQIKTRKCQ 1181
Query: 182 DLA-ALNQF-----HDGMVKEI-----AMDNVAKTLVDVVLGSDWDD---KIGKKLEDMK 227
+A A N H+G +++ M D V S K+G++ D
Sbjct: 1182 PIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRR--DSA 1239
Query: 228 IELSDNFVLTVLKELRIYPVKALG------FFRWVGEHSGY-----------KHNTITYN 270
I+L L +KE+ + P + FF++ H + + TY
Sbjct: 1240 IQL-----LNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYT 1294
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++R L + + + ++ EM++EG D + K ++DA+KLF+ M
Sbjct: 1295 ELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETL 1354
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLG 387
PSV + +++++ + V + +E + G S S Y + K
Sbjct: 1355 RCIPSVVTYNTIIKALFESKS----RASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 1410
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN---------- 437
R ++A +++ M GF P Y +I L KA R++ AC + E++EN
Sbjct: 1411 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 1470
Query: 438 -------------------------GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
GC PD+ + L+ G +D AL +M E
Sbjct: 1471 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 1530
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D + ++++NG + A ++L M + +RP ++ T++ L A EE
Sbjct: 1531 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST-VRPDVVSYNTVLGALSHAGMFEE 1589
Query: 533 AMNLLRLMKKQNY 545
A L++ M +
Sbjct: 1590 ASKLMKEMNTLGF 1602
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 15/178 (8%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A F+ + E+ G + Y +++ L + + D N+ +EM K G D+ Y +
Sbjct: 1450 ACELFQELKENCGSSSARV-YAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALM 1508
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ M+++A+ M + P + +++L ++ P + E L
Sbjct: 1509 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAM--------EMLS 1560
Query: 369 NSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
N +V Y+ + AL+ G F+EA K+MK M GFE D ITYS ++ + K
Sbjct: 1561 NMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 217/472 (45%), Gaps = 24/472 (5%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQF 148
PK S+V L K + D KA F+ + FR + L++ LV + +
Sbjct: 10 PKQITNSLVVQLIKAEKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK-TLV 207
L RMK++ C + E+ +LSI + + D A+ FH ++ A T++
Sbjct: 70 EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLD--AIRVFHKMEGFQLRPTQKAYLTIL 127
Query: 208 DVVLGSDWDDK-IG--KKLEDMKIE---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
D+++ + + IG +++ ++ I +S N ++ L + + AL F+ + + G
Sbjct: 128 DILVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEM-PNRG 186
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ ++ TY ++ L R ++ + + +EM+++G+ + TY + + +++A+
Sbjct: 187 CQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAI 246
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIH 380
L E M +P+V S L+ + + + + V +K L N ++ Y +
Sbjct: 247 GLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVT---YSTLI 303
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K + EA +++ M+ G +P+ Y ++I GLC AG +++A N +DEM G
Sbjct: 304 NGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGIS 363
Query: 441 PDIKTWTI-------LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
P+ +W++ ++QG C + RA + M + + D D L+ F +
Sbjct: 364 PNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGD 423
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
++ A ++L EM+ + P + + +I L +++ EA L + +Q +
Sbjct: 424 LHKAARILEEMVLDGCI-PDEGVWNVVIGGLWDRKKVREATEQLLVELQQKF 474
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++H+ T+ I+ L R ++E MK+E + D ++ I R + + D
Sbjct: 44 NGFRHDHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLD 103
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++F M +P+ + +L + N+ + F + LG S + +
Sbjct: 104 AIRVFHKMEGFQLRPTQKAYLTILDILVEENHVKRAIGF--YREMRELGIPSSVVSLNIL 161
Query: 380 HRALTKLGR-FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL K D A ++ + M N G +PD+ TY +I GLC+ G +A + EME+ G
Sbjct: 162 IKALCKNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKG 221
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ T+T LI G C +N +D A+ +M + + + L++G + A
Sbjct: 222 FSASVVTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAM 281
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+LL E+++K P T+ TLI L R+L EA+ +L M+ Q P + + IS
Sbjct: 282 QLL-EVMDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISG 340
Query: 559 F---GTVEDASEFL 569
G+ ++A+ F+
Sbjct: 341 LCAAGSYQEAANFI 354
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 167/370 (45%), Gaps = 13/370 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L + +S + V VLK + A FF W + GY H+ Y+ ++ LA+
Sbjct: 35 LNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQY 94
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ W++V M+K+G ++++T+ + R++ + +++AV F M P++ + L
Sbjct: 95 QIVWDLVSAMRKKGM-LNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFNGL 153
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ NN V + ++++ + Y + K A ++ + M
Sbjct: 154 LSALCKSNN-----VRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMV 208
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
AG +PD +TY ++ LCKAGR ++A V+ EM+ C P +++L+ + + ++
Sbjct: 209 EAGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIE 268
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M +K AD + LI F + +++L EM E + P T +
Sbjct: 269 DAIDTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEM-ESNGVAPNSRTCNVI 327
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSS 580
I ++G + + A + M K P + + I F + +E AL + +Y S
Sbjct: 328 ISSMIGQGQTDRAFRVFCRMIKLCEPD-ADTYTMMIKMFC---EKNELEMALKIWKYMKS 383
Query: 581 AAYLQVFESF 590
++ +F
Sbjct: 384 KQFVPSMHTF 393
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 184/481 (38%), Gaps = 82/481 (17%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L+ L + +++ + V VL++ +N A FF W ++ + S Y LM+ +L
Sbjct: 31 LDTALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAK 90
Query: 142 KDSLKQFWVTLRRMK-------EDHCY----------IEEETYLSILGVLKKAKKASDLA 184
+ W + M+ E C ++E Y V+ K +LA
Sbjct: 91 IRQYQIVWDLVSAMRKKGMLNVETFCIMMRKYARANKVDEAVY--TFNVMDKYDVVPNLA 148
Query: 185 ALNQFHDGMVKEIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N + K +NV A+ + D + G D E S + +L +
Sbjct: 149 AFNGLLSALCKS---NNVRKAQEIFDAMKGQFVPD-----------EKSYSILLEGWGKA 194
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
P +A FR + E +G + +TY ++ VL + V + VV+EM
Sbjct: 195 PNLP-RAREVFREMVE-AGCDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSF 252
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y + + +EDA+ F M K V
Sbjct: 253 IYSVLVHTYGVEHRIEDAIDTFLEMAKKGIKADV-------------------------- 286
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
Y+ + A K+ +F +++K M++ G P++ T + +I + G
Sbjct: 287 -----------VAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQG 335
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ + A V M + C PD T+T++I+ C NE++ AL + M K +
Sbjct: 336 QTDRAFRVFCRMIKL-CEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFS 394
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNL 536
LI G + A ++ EMIEK +RP + TF L + L+ R L E MNL
Sbjct: 395 ALIKGLCEKDNAAKACVVMEEMIEK-GIRPSRITFGRLRQLLIKEGREDVLKFLHEKMNL 453
Query: 537 L 537
L
Sbjct: 454 L 454
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 162/354 (45%), Gaps = 42/354 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G + D D ++ +
Sbjct: 28 ALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLQWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF +K E LG
Sbjct: 88 DSYGKAGIVQESVKLF-------------------------------------HKMEELG 110
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ YD + + + + GR+ A++ M + G EP T++ +I+G +G+ E A
Sbjct: 111 VERTIKSYDVLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAX 170
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++M+ PD+ T+ +I G+ +++ A F +M +N + LI G+
Sbjct: 171 RFFEDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGY 230
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
++ RV+ A +L+ EM + ++P T+ T + L A ++ EA + L+ M + P
Sbjct: 231 VAVDRVDDALRLVEEM-KGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPT 289
Query: 549 PEP-FVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
F++ IS K G ++ A++ LKA+ P+ A + V + + Y+
Sbjct: 290 DNSIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYD 343
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 85/185 (45%), Gaps = 3/185 (1%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
E+MK D+ TY + + + + ME+A K F M +P+V + L++ ++
Sbjct: 174 EDMKSRDITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAV 233
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP-DN 408
+ D L R+ + + G + Y L + EA +K M + P DN
Sbjct: 234 DRVDDAL--RLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDN 291
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ ++I G CKAG + A +VL M + + +LI+ +C A + D+A+ K
Sbjct: 292 SIFLRLISGQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDK 351
Query: 469 MMEKN 473
++EK+
Sbjct: 352 LIEKD 356
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 174/387 (44%), Gaps = 14/387 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L + I +S V VLK + A FF W G+ Y H+ Y+ ++ LA+
Sbjct: 34 LSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQY 93
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ W++V +M+ ++++T+ I R++ + + +++AV F M P++ + L
Sbjct: 94 QIMWDLVNKMRSLKI-LNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSL 152
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ N V + + + + Y + K +A ++ + M
Sbjct: 153 LSALCKSKN-----VVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMV 207
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD +TY ++ LCKAGR ++A ++ EM+ + C P +++L+ + N ++
Sbjct: 208 DMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIE 267
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M +AD + + LI F ++ AY++L EM K +RP T +
Sbjct: 268 DAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCK-GIRPNSRTCNII 326
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY 577
+ L+ +EA + R M K P + + I F +E A + K + +K++
Sbjct: 327 LNSLISCGDTDEAFRVFRRMIKV-CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQF 385
Query: 578 -PSSAAYLQVFESFFNEGRHYEAKDLL 603
PS + + +G +A LL
Sbjct: 386 VPSMHTFSVLINGLCKKGNASKACILL 412
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 194/464 (41%), Gaps = 46/464 (9%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
EL+ L E +++ V VL++ +N A FF W ++ + S Y M+ +L
Sbjct: 29 ELDTSLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLA 88
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
+ W + +M+ + ET+ I+ +++K + A+ F+ M K
Sbjct: 89 KIRQYQIMWDLVNKMRSLK-ILNVETFCIIMRKYARSQKVKE--AVYTFNI-MEKYDVPP 144
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
N+A + N +L+ L + + VKA F G
Sbjct: 145 NLA---------------------------AFNSLLSALCKSK-NVVKAQEIFN--GMKD 174
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
+ ++ TY+ +L + ++ + EM G + DI TY + K +++A
Sbjct: 175 QFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEA 234
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
V + + M KP+ S+L+ + N D F + E + +VY+ +
Sbjct: 235 VGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADV---AVYNAL 291
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K+ + A +++ M G P++ T + ++ L G ++A V M + C
Sbjct: 292 IGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIK-VC 350
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+T++I+ C ++++ AL + M K + VLING + + A
Sbjct: 351 DPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACI 410
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
LL EMIEK +RP TF L + L+ R L+E MNLL
Sbjct: 411 LLEEMIEK-GIRPSSVTFGKLKQLLIKEGREDVLEFLQEKMNLL 453
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 125/310 (40%), Gaps = 30/310 (9%)
Query: 111 KASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI 170
KA FN + K QF P S YS++L +L + R M + C + TY +
Sbjct: 164 KAQEIFNGM--KDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCDPDIVTYGIM 221
Query: 171 LGVLKKAKKASDLAALNQFHDGMVKEIAMD-NVAK--TLVDVVLGSDWDDKIGKKLEDMK 227
+ +L KA + + G+VKE MD +V K + + VL + I ++ED
Sbjct: 222 VDILCKAGRVDEAV-------GIVKE--MDSSVCKPTSFIYSVLVHTYG--IENRIEDAV 270
Query: 228 IELSDNFVLTVLKELRIYPVKALGF---------FRWVGEHS--GYKHNTITYNGILRVL 276
D + ++ +Y F +R + E G + N+ T N IL L
Sbjct: 271 YTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSL 330
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ + V M K + D DTY + + F + +E A+K++++M + PS+
Sbjct: 331 ISCGDTDEAFRVFRRMIKVC-DPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSM 389
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
S+L+ + N + + G S + + + L K GR D E +
Sbjct: 390 HTFSVLINGLCKKGNASKACIL--LEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLEFLQ 447
Query: 397 KAMKNAGFEP 406
+ M EP
Sbjct: 448 EKMNLLVKEP 457
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 141/307 (45%), Gaps = 11/307 (3%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I L + + LS + V VL + + FF W + + +YN IL+ L R
Sbjct: 131 IEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKALGR 190
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+V+ M +EG E ++ + K + A++ F + + K +
Sbjct: 191 RGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKGHQVSKALQFFRNLKEIGLKCDTET 250
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESL--GN-SLSKSVYDGIHRALTKLGRFDEAEKM 395
++LL+ + ++ AN + +L GN + Y+ + ++ GR E E+M
Sbjct: 251 LNILLQCMCRRSH------VGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHGEVEQM 304
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+KAM+ GF PD +T++ +I L +A + +DA + D+M+ENGC PD+ + +I
Sbjct: 305 LKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISNFIC 364
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ D+ L + +M+ + D + LI GFL K+V A ++ EM+ R+ P
Sbjct: 365 IGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMV--ARIIPTTG 422
Query: 516 TFKTLIE 522
+ I+
Sbjct: 423 AITSFIQ 429
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 3/173 (1%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
E M E D++TY + F K + + DA+++F+ M+ P+ + ++ S
Sbjct: 376 ERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMFDEMV-ARIIPTTGAITSFIQLSCSY 434
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
P ++ + K +G +SK+ Y + L+ G+F + M+ +G++PD
Sbjct: 435 GPPHAAML--IYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQESGYDPDVE 492
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
TY I LCK G+ E+A V++E G P +T + L A N + A
Sbjct: 493 TYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLACNRTEMA 545
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 126/328 (38%), Gaps = 49/328 (14%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESV---RDFWNVVEEMKKEGYEMDIDTY 304
KAL FFR + E G K +T T N +L+ + R V F+N + K ++ TY
Sbjct: 231 KALQFFRNLKE-IGLKCDTETLNILLQCMCRRSHVGAANSFFN----LTKGNIPFNVMTY 285
Query: 305 IKISRQFQKFRMMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + ++ + ++ + M +DG + P + L+ + N D + ++ +K
Sbjct: 286 NIVIGGWSRYGRHGEVEQMLKAMELDG-FSPDCLTHTYLIECLGRANQIDDAV--KIFDK 342
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G + Y+ + +G FD+ + M + EPD TYS +I G KA +
Sbjct: 343 MDENGCTPDVDAYNAMISNFICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKK 402
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK--------------- 468
DA + DEM IP T IQ C+ A+L + K
Sbjct: 403 VADALEMFDEMVAR-IIPTTGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKL 461
Query: 469 --------------------MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
M E YD D + + I+ ++ A L++E +
Sbjct: 462 LLMRLSLFGKFGMLLNIWNEMQESGYDPDVETYEHAIDCLCKTGQLENAV-LVMEECLRQ 520
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNL 536
P + T L KLL R E A L
Sbjct: 521 GFFPSRRTRSKLNNKLLACNRTEMAYKL 548
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/440 (19%), Positives = 164/440 (37%), Gaps = 35/440 (7%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E+ L L+ + V VL E FF W + ++ Y+++L+ L
Sbjct: 131 IEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKALGR 190
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ L M + E ++ L K + S AL F + +KEI +
Sbjct: 191 RGFFDSMMDVLYNMTREGVEATLEMVSIVVDSLVKGHQVSK--ALQFFRN--LKEIGLKC 246
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS- 260
+TL ++ +G + N V+ Y + G+ R+ G H
Sbjct: 247 DTETLNILLQCMCRRSHVGAANSFFNLT-KGNIPFNVMT----YNIVIGGWSRY-GRHGE 300
Query: 261 -----------GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
G+ + +T+ ++ L R + D + ++M + G D+D Y +
Sbjct: 301 VEQMLKAMELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMIS 360
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
F + + +E M+ +P + S L+ +VA+ E
Sbjct: 361 NFICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAK--------KVADALEMFDE 412
Query: 370 SLSKSV-YDGIHRALTKL----GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+++ + G + +L G A + K + G Y ++ L G+F
Sbjct: 413 MVARIIPTTGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKF 472
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
N+ +EM+E+G PD++T+ I C +++ A+L + + + + L
Sbjct: 473 GMLLNIWNEMQESGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKL 532
Query: 485 INGFLSQKRVNGAYKLLVEM 504
N L+ R AYKL +++
Sbjct: 533 NNKLLACNRTEMAYKLWLKI 552
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 105/260 (40%), Gaps = 9/260 (3%)
Query: 85 KLEELSPK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
+L+ SP LTH ++ L + N + A F+ + D+ P Y+ M+ N +
Sbjct: 309 ELDGFSPDCLTHTYLIECLGRA-NQIDDAVKIFDKM-DENGCTPDVDAYNAMISNFICIG 366
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
Q RM + C + TY +++ KAKK +D AL F + + + I
Sbjct: 367 DFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVAD--ALEMFDEMVARIIPTTGAI 424
Query: 204 KTLVDVVLGSDWDDK---IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG-EH 259
+ + + I KK + +S N +L L ++ + W +
Sbjct: 425 TSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNIWNEMQE 484
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SGY + TY + L + + + V+EE ++G+ T K++ + E
Sbjct: 485 SGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLACNRTEM 544
Query: 320 AVKLFEFMMDGPYKPSVQDC 339
A KL+ + ++ ++Q C
Sbjct: 545 AYKLWLKIKVARHQENLQRC 564
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 190/429 (44%), Gaps = 24/429 (5%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
AKT+ +++ W D++ L LS V L+ +++ P KA FF W+ E G
Sbjct: 58 TAKTIANLINYKPWSDEL---LSSFTTSLSKTTVFQTLRHIKV-PTKAFLFFNWIHE-KG 112
Query: 262 YKHNTITYNGILRVLARHESV---RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ HN TY +L +L R +++ R+F +E+ +++ + + R + + + +
Sbjct: 113 FSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSNGEVKLEDRFFNSLIRSYGEAGLFK 172
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK-YESLGNSLSKSVYD 377
++VKLFE M P V + +L + + + V ++ ++ G Y+
Sbjct: 173 ESVKLFENMKLIGVSPGVVTFNSVLLVL--LKRGRTNMAKEVYDEMLKTYGVKPDTYTYN 230
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE- 436
+ R K DE K M + +PD +TY+ ++ GLC+AG+ + A N+++ M +
Sbjct: 231 ILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKK 290
Query: 437 -NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
PD+ T+T LI+G+C EVD AL +M + + + LI G ++ +
Sbjct: 291 CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWD 350
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
++L +M P TF TLI A L+EA + MKK +
Sbjct: 351 KMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENMKKLEVSADSASYSVL 410
Query: 553 VQYISKFGTVEDASEFLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEAKDLLY 604
++ + + G A L KE P +A+Y +F+ G+ +A+ +L
Sbjct: 411 IRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLR 470
Query: 605 KCPHHIRQD 613
+ QD
Sbjct: 471 QLMKRGTQD 479
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 138/290 (47%), Gaps = 16/290 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY---IKISRQFQKFRMMEDAV 321
+ +TY ++R R + V + +++EEM G + +I TY IK + QK+ M++ +
Sbjct: 297 DVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDKMKEIL 356
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ + DG P + L+ S N D F+V + L S + Y + R
Sbjct: 357 E--QMKGDGGSIPDACTFNTLINSHCCAGNLDEA--FKVFENMKKLEVSADSASYSVLIR 412
Query: 382 ALTKLGRFDEAEKMMKA-------MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L + G + +AE + + + G +P +Y + LC+ G+ + A VL ++
Sbjct: 413 TLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQYLCENGKTKKAERVLRQL 472
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G D ++ I+I GHC + M+ +++ D D+ D LI+GFL + +
Sbjct: 473 MKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPDIDIYDYLIDGFLRKDKP 531
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
A + L +M+ K +P +T+ +++ +LL + E+ ++ +M ++N
Sbjct: 532 LLAKETLEKML-KSSYKPQTSTWHSILNRLLEQGCVHESAGVIVMMLERN 580
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 102/482 (21%), Positives = 198/482 (41%), Gaps = 46/482 (9%)
Query: 85 KLEELSPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
KL +SP + T SV+ VL K A ++ + +P + Y++++R
Sbjct: 182 KLIGVSPGVVTFNSVLLVLLK-RGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNS 240
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
+ + + + M C + TY +++ L +A K L K+++ D V
Sbjct: 241 MVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDVV- 299
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
T ++ G ++ + L+ +L+E+ G K
Sbjct: 300 -TYTTLIRGYCRKQEVDEALD-------------ILEEM---------------NGRGLK 330
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVK 322
N +TYN +++ L + ++E+MK +G + D T+ + +++A K
Sbjct: 331 PNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFK 390
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-------VFRVANKYESLGNSLSKSV 375
+FE M S+L+R++ D G +F S G +
Sbjct: 391 VFENMKKLEVSADSASYSVLIRTLCQ--KGDYGKAEMLFDELFEKEILLSSYGPKPLAAS 448
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + + L + G+ +AE++++ + G + D ++Y VI G CK G +E+ +L M
Sbjct: 449 YKCMFQYLCENGKTKKAERVLRQLMKRGTQ-DPLSYQIVILGHCKEGSYENGYGLLVWML 507
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+PDI + LI G ++ A KM++ +Y ++N L Q V+
Sbjct: 508 RRDFLPDIDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVH 567
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE-AMNLLRLMKKQNYPPFPEPFVQ 554
+ ++V M+E+ +R F T +LL R L++ A + L+ K + + VQ
Sbjct: 568 ESAGVIVMMLER-NIRQ-NINFSTKCLQLLFDRGLQDKAFKITELIYKNGFCVKMDEVVQ 625
Query: 555 YI 556
++
Sbjct: 626 FL 627
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD +K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLIKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G + D TYS +I GLCKA +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGL 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYSVLINGLCKASKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ D+ + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGL 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I C+ G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMPSVVT 418
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 140/287 (48%), Gaps = 8/287 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ ++LS V+ VL+ + A FF W G+ +G+ HN+ TYN ++ VL R
Sbjct: 181 LDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQF 240
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
++ EM ++G + ++T+ + F + + AV +FE M + V + L
Sbjct: 241 ESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCL 299
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ L +E L + + ++ Y + ++ EA + M
Sbjct: 300 LDNLGRAK-----LGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMI 354
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF+PD I + ++ GL K + DA + + M+ G P+++T+TILI+ C ++
Sbjct: 355 DKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQ 414
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
A+ F +M++ DA + LI GF +QK+++ Y LL EM EK
Sbjct: 415 EAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEK 461
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 162/427 (37%), Gaps = 76/427 (17%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E L+E + L+H VV VL + + + A FF W K F +S Y+ M+ L
Sbjct: 177 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 236
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ L M E E ++I ++ + ++K D
Sbjct: 237 TRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFE-----LMKRYNFDA 291
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
T ++ +L + K+GK+ + + +L D F LR Y
Sbjct: 292 GVDT-INCLLDNLGRAKLGKEAQALFEKLEDRFT----PNLRTY---------------- 330
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
T+ NG R+ E+ R WN EM +G++ DI + + K + DA+
Sbjct: 331 ----TVLLNGWCRIKNLVEAGRT-WN---EMIDKGFKPDIIAHHTMLEGLLKCKKKSDAI 382
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
KLFE M P+V+ ++L+R
Sbjct: 383 KLFEVMKAKGPSPNVRTYTILIRD------------------------------------ 406
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K + EA + M ++G +PD Y+ +I G + + +L EM+E GC
Sbjct: 407 -LCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPA 465
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL- 500
D +T+ LI+ D A+ + KM++ + ++++ + + Y++
Sbjct: 466 DGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRN----YEMG 521
Query: 501 LVEMIEK 507
EMIEK
Sbjct: 522 CAEMIEK 528
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 159/360 (44%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + IDT K+
Sbjct: 54 ASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ L V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRLAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQAHHLIDEMSVK-GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 286
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 287 TLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQE 346
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ DA ++IN F + V
Sbjct: 347 NIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 407 SKLLKEM 413
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L + Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 159/383 (41%), Gaps = 43/383 (11%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
Y+ N +T N ++ L V + +++ M K G E + TY + + K A+
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
LF M + K SV S+++ S+ N D L + N+ E G Y I
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL--SLFNEMEMKGIKADVVAYSSIIG 287
Query: 382 ALTKLGRFDEAEKMMKAM--KNA---------------------------------GFEP 406
L GR+D+ KM++ M +N G P
Sbjct: 288 GLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAP 347
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D ITYS +I G CK R +A +LD M GC P+I T++ILI +C A VD + F
Sbjct: 348 DTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLF 407
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++ K AD + L+ GF ++N A +L EM+ + + P T+ L++ L
Sbjct: 408 CEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSR-GVPPSVVTYGILLDGLCD 466
Query: 527 ARRLEEAMNLLRLMKKQNY---PPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAA 582
L++A+ + M+K + + V+DA +LSVK P
Sbjct: 467 NGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLT 526
Query: 583 YLQVFESFFNEGRHYEAKDLLYK 605
Y + +G EA D+L++
Sbjct: 527 YNVMIGGLCKKGSLSEA-DMLFR 548
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 186/444 (41%), Gaps = 40/444 (9%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL 183
++RP+ + ++ L K + + V + RM + C E TY +L + K +
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN--RMCKSGNTA 226
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
AL+ F + I V ++V L D + L+D L++ E+
Sbjct: 227 LALDLFRKMEERSIKASVVQYSIVIDSLCKDGN------LDD---------ALSLFNEME 271
Query: 244 IYPVKA--------LGFF----RW------VGEHSGYK--HNTITYNGILRVLARHESVR 283
+ +KA +G RW + E G N +T++ ++ V + +
Sbjct: 272 MKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLL 331
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + EM G D TY + F K + +A ++ + M+ +P++ S+L+
Sbjct: 332 EAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILI 391
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
S D G+ R+ + S G Y+ + + + G+ + A+++ + M + G
Sbjct: 392 NSYCKAKRVDNGM--RLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P +TY ++ GLC G + A + ++M+++ I I + I+I G C A++VD A
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F + K D +V+I G + ++ A L +M E P T+ LI
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKED-GCAPSDCTYNILIRA 568
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP 547
LG + ++ L+ MK + +
Sbjct: 569 HLGGSGVISSVELIEEMKMRGFAA 592
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 8/358 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
LGF + + + +G +HN T N ++ R + ++VV K G+E + T+ +
Sbjct: 88 VLGFCKEM-DLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLI 146
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F + +AV L + M++ Y+P+V + L+ + LV ++ G
Sbjct: 147 NGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVL--IDRMVKYG 204
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
++ Y + + K G A + + M+ + + YS VI LCK G +DA
Sbjct: 205 CEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDAL 264
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
++ +EME G D+ ++ +I G C D +M+ +N + LI+ F
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ + ++ A +L EM+ + + P T+ +LI+ RL EA +L LM + P
Sbjct: 325 VKEGKLLEAKELYNEMVAR-GIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPN 383
Query: 549 PEPFVQYISKFGT---VEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDL 602
+ I+ + V++ +S K + + Y + + F G+ AK+L
Sbjct: 384 IVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKEL 441
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 188/437 (43%), Gaps = 48/437 (10%)
Query: 65 SPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKL--DNDPEKASAFFNWVCDK 122
S N++L L +L K+EE S K + V+ L D + + A + FN + +
Sbjct: 222 SGNTALAL--------DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM-EM 272
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K + YS ++ L N LR M + T+ +++ V K K
Sbjct: 273 KGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKL-- 330
Query: 183 LAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
L A +++ + + IA D + +L+D G ++++G+ + + + +S
Sbjct: 331 LEAKELYNEMVARGIAPDTITYSSLID---GFCKENRLGEANQMLDLMVS---------- 377
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
G + N +TY+ ++ + + V + + E+ +G D
Sbjct: 378 ------------------KGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADT 419
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + + F + + A +LF+ M+ PSV +LL + +N +L +
Sbjct: 420 VTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLC--DNGELQKALEIF 477
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K + L +Y+ I + + D+A + ++ G +PD +TY+ +I GLCK
Sbjct: 478 EKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G +A + +M+E+GC P T+ ILI+ H + V ++ +M + + ADA +
Sbjct: 538 GSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGSGVISSVELIEEMKMRGFAADASTI 597
Query: 482 DVLINGFLSQKRVNGAY 498
+++ LS R++ +
Sbjct: 598 KMVVV-MLSDGRLDKTF 613
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 134/299 (44%), Gaps = 25/299 (8%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A+ LFE M+ PS+ D S L +++ DL L F K L N + ++Y
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGF---CKEMDL-NGIEHNMY 105
Query: 377 ------DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ R L F + +K GFEP+ IT+S +I G C GR +A +
Sbjct: 106 TMNIMINCFCRKRKLLFAFSVVGRALKF----GFEPNTITFSTLINGFCLEGRVSEAVAL 161
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+D M E P++ T LI G C V AL+ +M++ +A+ ++ L+
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEAN----EITYGPVLN 217
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQAT---FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +G L +++ K+ R +A+ + +I+ L L++A++L M+ +
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277
Query: 548 FPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ I G +D ++ L+ + + P+ + + + F EG+ EAK+L
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKEL 336
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ +EA + ++M + P I +S++ + + ++ EM+ NG ++ T
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I+I C ++ A + ++ ++ + LINGF + RV+ A L+ M+E
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVE- 167
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVED 564
++ RP T TLI L R+ EA+ L+ M K P + + K G
Sbjct: 168 MKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTAL 227
Query: 565 ASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDL 602
A + + + + +S Y V +S +G +A L
Sbjct: 228 ALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSL 266
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S + ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EMI K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMIMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ KP + L+ + DL F + L Y +
Sbjct: 296 QDLIDEMIMKGLKPDKITYTTLIDG--NCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYM 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
Length = 382
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 18/305 (5%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FR + G + N TYN ++ L + + + V+ E +K + D+ TY +
Sbjct: 65 AFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLM 124
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ +++A+ F M + Y P++ + ++ + R+A+ E
Sbjct: 125 AALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRAR--------RLADALEVFN 176
Query: 369 NSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ + Y + L K + DEA++++ M + G PD + Y+ ++ G AG
Sbjct: 177 EMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAG 236
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R + A +L M GCIPD+ T+T++I C VD A F +++ +
Sbjct: 237 RLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYS 296
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LI G+ RV+ K++ EM RP T+ T+I L R EEA + R M +
Sbjct: 297 ALIGGYCRASRVDEGGKVMREMA----CRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352
Query: 543 QNYPP 547
+ P
Sbjct: 353 CGFVP 357
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 139/318 (43%), Gaps = 9/318 (2%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLLRSISSIN 350
M EG + + T I + + + A++ F+ ++ + +P V + L+ + +
Sbjct: 1 MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60
Query: 351 NPDLGLVFRVANKYESLGNSLSKS-VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
D F + K + G + Y+ + L K R D A ++ + F PD +
Sbjct: 61 RVDAA--FDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVV 118
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ ++ L + GR ++A +M E G +P + ++ +I G C A + AL F +M
Sbjct: 119 TYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEM 178
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+++++ + V+I+G +++ A +LL M+ + RP + L+ A R
Sbjct: 179 IDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSE-GCRPDLVAYTPLVLGFSAAGR 237
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSV-KEYPSSAAYLQ 585
L+ A+ LLR M Q P + I K G V+DA E + L K P+ Y
Sbjct: 238 LDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSA 297
Query: 586 VFESFFNEGRHYEAKDLL 603
+ + R E ++
Sbjct: 298 LIGGYCRASRVDEGGKVM 315
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 11/188 (5%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N +TY+ ++ L + + + + +++ M EG D+ Y + F ++ A+
Sbjct: 183 FHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSAL 242
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSV--YDG 378
L M+ P V ++++ + + D +FR E + N S +V Y
Sbjct: 243 GLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFR-----ELVANKCSPNVVTYSA 297
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + R DE K+M+ M P+ +TY+ +I+GL R E+A + EM E G
Sbjct: 298 LIGGYCRASRVDEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECG 354
Query: 439 CIPDIKTW 446
+PD +T+
Sbjct: 355 FVPDARTY 362
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 148/339 (43%), Gaps = 7/339 (2%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ +RD K+ + + DT K+ K + + +E +
Sbjct: 69 FSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVJEHLMKLKYFKLVWGFYEESL 128
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ Y S+ ++L+ S + ++ L V + G S ++ + KLG
Sbjct: 129 ECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ M+ +G +PD TYS +I GLCK + +DA + DEM +NG +P+ T+T
Sbjct: 187 LDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTT 246
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI GHC VD A+ + +M+ ++ D + LI G + + A L EM K
Sbjct: 247 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMK- 305
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
L+P + T+ TLI+ LE A + M K+N + IS G DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L+ LSV P Y + F +G + LL
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ + M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +P+ TY+ +I CK G +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 431 LDEMEENGCIPDIKT 445
L EM+ +G +P + T
Sbjct: 404 LKEMQRDGYVPSVVT 418
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 100/428 (23%), Positives = 189/428 (44%), Gaps = 37/428 (8%)
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY-----PV 247
+V + +AK + +V+ W+ +K + N T+L ++ +
Sbjct: 29 LVFQCGETQLAKIVCGIVVKGHWNSL-------LKPNVGSNLTSTILNQVLLNLSLDGCC 81
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---------- 297
+ FF+WV + +KH+ + ++ LA+H+ + N++E + Y
Sbjct: 82 VSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 141
Query: 298 ---EMDIDTYIKISRQFQKF----RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
D D+ +I F RM +DA+++FE M +KP + C++LL S++
Sbjct: 142 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 201
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ +V++V K +G + +++ + A K G ++AE+++ M++ PD T
Sbjct: 202 LTN--MVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT 259
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC-AANEVDRALLCFAKM 469
Y+ +I CK G +A + D ME G PDI T+ LI G C N+++ AL M
Sbjct: 260 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVM 319
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + ++ + ++ A +LL EM E+ ++ P T TLI
Sbjct: 320 EVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSER-KVEPDNVTCNTLINAYCKIGD 378
Query: 530 LEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQ 585
+ AM + + M + P F + K V+ A EFL + L PS + Y
Sbjct: 379 MGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSW 438
Query: 586 VFESFFNE 593
+ +S++++
Sbjct: 439 LVDSYYDQ 446
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/364 (23%), Positives = 147/364 (40%), Gaps = 26/364 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARH-ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E G + +TYN ++ R + + + E M+ EG + TY I R+ +
Sbjct: 284 ERGGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGK 343
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA +L M + +P C+ L+ + I D+G +V K G + +
Sbjct: 344 IKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG--DMGSAMKVKKKMLEAGLKPDQFTF 401
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ KL D A++ + M +AGF P TYS ++ E + DE+
Sbjct: 402 KALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSR 461
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G DI + LI+ C ++++ A F M K D+ + L + +
Sbjct: 462 KGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIA 521
Query: 497 AYKLLVEMIEKVRL-------RPWQATFK------TLIEKLLGARRLEEAMNLLRLMKKQ 543
A +L EM +K RL R + A++ L + RRL + N+L+ +++
Sbjct: 522 ASDMLDEM-DKRRLMITLKIYRCFSASYAGDGSILGLFWDHVIERRL-ISKNILKYIQQL 579
Query: 544 NYPPFPEP-FVQYISKFGTVEDASEFLKA--LSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+Y P FV + S F + K L + + S L+ F EG H +
Sbjct: 580 DYMRISHPSFVHFKSFFNILHCCFSLKKKCFLPAETWTWSKVPLEFF-----EGIHCVCR 634
Query: 601 DLLY 604
D+ Y
Sbjct: 635 DVGY 638
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYI 305
R V E G +TYN ILR L ++D ++ EM + E D I+ Y
Sbjct: 315 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 374
Query: 306 KI----SRQFQKFRMMEDAVK-------------------------LFEFMMDGPYKPSV 336
KI S K +M+E +K LFE M+D + PS
Sbjct: 375 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE-MLDAGFSPSY 433
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
S L+ S +N + V R+ ++ G + SVY + R L K+ + + AE++
Sbjct: 434 STYSWLVDSYYDQDNKE--AVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIF 491
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
M+ G + D++ Y+ + + KAG+ A ++LDEM++ + +K +
Sbjct: 492 TLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 541
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 112 bits (279), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + N +TYN I+ + + +++ +M + + D+ TY I + ++
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K S+ + L+ + + G+ + + + + N ++ ++
Sbjct: 223 AAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVIT---FN 279
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 280 VLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRN 339
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F K+ ++ A+ +L+ GF ++ A
Sbjct: 340 NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIA 399
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + + P T+ L++ L +LE+A+ + ++K ++
Sbjct: 400 EELFQEMVS-LGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIE 458
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 459 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 510
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 155/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + +
Sbjct: 92 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKV 151
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+AV L M++ +P+V + ++ I + D L + K + Y
Sbjct: 152 SEAVVLVARMVENGCQPNVVTYNSIVNGICK--SGDTSLALDLLRKMDERNVKADVFTYS 209
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 210 TIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSR 269
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
IP++ T+ +LI ++ A + +M+ K + + L++G+ Q R++ A
Sbjct: 270 KIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEA 329
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ P TF +LI+ +R++E M L R + K+ + VQ
Sbjct: 330 NNMLDLMVRN-NCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQ 388
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G +E A E F + +S+ P Y + + + G+ +A ++
Sbjct: 389 GFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEI 437
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 133/292 (45%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ PS+ D S ++S LV K E N ++ ++Y
Sbjct: 47 DDAIDLFQEMIRSRPLPSLVDFSRFFSGVAS--TKQFNLVLDFCKKMEL--NGIAHNIYT 102
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GLC + +A ++ M
Sbjct: 103 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMV 162
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC P++ T+ ++ G C + + AL KM E+N AD +I+ ++
Sbjct: 163 ENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCID 222
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + + LL+ M + P F
Sbjct: 223 AAISLFKEM-ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
I F G +++A+E K + K P++ Y + + + + R EA ++L
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNML 333
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 101/483 (20%), Positives = 202/483 (41%), Gaps = 27/483 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ ++ L + + + V + RM E+ C TY SI+ G+ K +
Sbjct: 128 KLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTS 187
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L L + + VK T++D + D ++M+ + +
Sbjct: 188 LALDLLRKMDERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETK-------GIKS 238
Query: 241 ELRIYPVKALGFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVV 289
L Y G + + G + N IT+N ++ V + +++ +
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM +G + TY + + + +A + + M+ P + + L++ +
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D G+ +FR +K + N+++ S+ + + + G+ + AE++ + M + G PD
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSI---LVQGFCQSGKLEIAEELFQEMVSLGVLPDV 415
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY ++ GLC G+ E A + ++++++ DI +TI+I+G C +V+ A F
Sbjct: 416 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCS 475
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
+ K + V+I+G + ++ A LL +M E P T+ TLI L
Sbjct: 476 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN-EPNDCTYNTLIRAHLRDG 534
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT-VEDASEFLKALSVKEYPSSAAYLQVF 587
L + L+ MK + I + V E ++ VK + + AYL F
Sbjct: 535 DLTASAKLIEEMKSCGFSADASSIKMVIDMLSSAVWWFKEPRRSPGVKRFRGTQAYLMPF 594
Query: 588 ESF 590
+
Sbjct: 595 NTI 597
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 119/288 (41%), Gaps = 37/288 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TYN L L R + D V EEM G D+ TY + F R + A +LF
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M+ +P+ + LL + + PD
Sbjct: 576 ETMISRGCRPNAVTYNCLLHGLCKESKPD------------------------------- 604
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
EA ++ + M G +PD +TY+ +++G C G+ E A V DEM G PD+
Sbjct: 605 ------EAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVV 658
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ L++G A + A F M+ + D +++I+G KR++ A ++ M
Sbjct: 659 AYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ P T+ +LI L G +RL EAM + + + + P P F
Sbjct: 719 EQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAF 766
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 164/353 (46%), Gaps = 26/353 (7%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
V V+K LR +AL FFRW+ + +KH+ TYN +L L RH ++ V E+M
Sbjct: 100 VGAVIKHLRDGG-EALTFFRWL-QARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVA 157
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G + TY + + R ++AV+ F M+D +KPS S L + ++ L
Sbjct: 158 QGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPS----STLYQKVTEC----L 209
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKL--------GRFDEAEKMMKAMKNAGFEP 406
+ G L K V + L K + EA K+ +AM +G +P
Sbjct: 210 KATGKEGEFSRVFGRDLEKRV--AVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKP 267
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP-DIKTWTILIQGHCAANEVDRALLC 465
D YS ++ CK ++A + EM P + WT + G C + ++++A
Sbjct: 268 DATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEA 327
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ M+++ + + D+LI + R++ A + +E+ + ++P T ++I++L
Sbjct: 328 -CRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGR-NIQPSSGTCHSVIQELC 385
Query: 526 GARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVK 575
A R++ A++LL M K+ Y P + + K +++A EFL+ + K
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK 438
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/341 (21%), Positives = 137/341 (40%), Gaps = 6/341 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y+ ++R+L + E+ + T + ++ K ++ A+ L E M
Sbjct: 341 VYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETM 400
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ Y P + S+L+ + + F + S S Y+ + +L K
Sbjct: 401 IKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAK 460
Query: 388 RFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
+ +A + M F PD ++YS +I G CK A + +M + C+P++ T+
Sbjct: 461 KVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTY 520
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ G + A + +M+ D LI+GF ++ + A++L MI
Sbjct: 521 NAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMIS 580
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVE 563
+ RP T+ L+ L + +EA L R M ++ P + + F G +E
Sbjct: 581 R-GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIE 639
Query: 564 DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
A E + K + P AY + + FF G+ EAK L
Sbjct: 640 QAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLF 680
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/346 (22%), Positives = 147/346 (42%), Gaps = 41/346 (11%)
Query: 111 KASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI 170
+A A F+ + ++ F P YS+++ D L + ++M + +C TY +
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAF 523
Query: 171 L-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
L G+++K + +A ++ MV +V T ++ G K D E
Sbjct: 524 LNGLMRKGR----IADAQGVYEEMVAAGCSPDVI-TYSTLIHGFSLARK-----HDQAHE 573
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
L + + G + N +TYN +L L + + +
Sbjct: 574 LFETMI-----------------------SRGCRPNAVTYNCLLHGLCKESKPDEAHELF 610
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M + G + D TY + F +E AV++F+ M+ + P V + LL+
Sbjct: 611 RKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRA 670
Query: 350 NNP-DLGLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAM-KNAGFEP 406
P + +F+V + +++S ++ DG L+K R D+A ++ + M ++ G P
Sbjct: 671 GKPGEAKQLFQVMVSRQCKPDTVSHNIMIDG----LSKAKRLDDAVEVFERMEQDHGCSP 726
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
D +TY+ +IFGLC R +A V E++ PD + +L++
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA 772
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 6/240 (2%)
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S+ VYD + R L + GR D+AE+ + +P + T VI LCKAGR + A +
Sbjct: 336 SSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALS 395
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK--NYDADADLLDVLING 487
+L+ M + G PD+ T ++LI C A+++ A M K + + + L+N
Sbjct: 396 LLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNS 455
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K+V+ A+ + M+ + P ++ LI+ L A L + M N P
Sbjct: 456 LCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP 515
Query: 548 ---FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F+ + + G + DA + + ++ P Y + F +H +A +L
Sbjct: 516 NVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELF 575
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 170/427 (39%), Gaps = 78/427 (18%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G G + ITYN ++ L ++ V + + + +M EGYE D TY I + K M
Sbjct: 276 GVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGM 335
Query: 317 MEDAVKLFEFMMDGPYKPSVQD----CSLLL---------RSISSIN-------NPDL-- 354
M++A ++ DG +K V D CSL+ R+I+ N P+L
Sbjct: 336 MQNADQILR---DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVL 392
Query: 355 -----------GLVF---RVANKYESLGNSLSKSVYDGIHRALTKLG------------- 387
GL+ ++ N+ G S Y+ + L K+G
Sbjct: 393 CNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAI 452
Query: 388 ----------------------RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+ D A +++ M N G PD ITY+ ++ GLCKAG++E
Sbjct: 453 AKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYE 512
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D M E GC+P+I T+ IL + C A +V+ AL +M K D L+
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
GF ++GAY+L + E+ + AT+ +I G + A L M + +
Sbjct: 573 KGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGF 632
Query: 546 PPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I F G + FL K PS + +V + R +EA
Sbjct: 633 SPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVG 692
Query: 602 LLYKCPH 608
+++ H
Sbjct: 693 IIHLMVH 699
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 130/323 (40%), Gaps = 39/323 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N + N +++ L++ + ++ EM + G DI TY + K + DA
Sbjct: 385 GLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDA 444
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + + P V + L+ L + ++ + G S Y+ I
Sbjct: 445 DNLVIDAIAKGHLPDVFTFNTLIDGYCK--KLKLDNAIEIVDRMWNHGVSPDVITYNSIL 502
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G++++ K M G P+ ITY+ + CKA + E+A N+++EM+ G
Sbjct: 503 NGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFA--------------------------------- 467
PD+ + L++G C ++D A F
Sbjct: 563 PDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEK 622
Query: 468 ---KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
KM E + D+ V+I+GF +N Y L+ IEK L P TF ++ L
Sbjct: 623 LFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEK-GLIPSLTTFGRVLNCL 681
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
RR+ EA+ ++ LM + P
Sbjct: 682 CLKRRVHEAVGIIHLMVHKGIVP 704
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 153/363 (42%), Gaps = 27/363 (7%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID--- 302
P+KAL F V + G+KH +TY G++ L H V+ E + M+ID
Sbjct: 20 PLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETR-----MNIDNGL 74
Query: 303 ---TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LV 357
YI R + + +++AV +FE M +PSVQ + ++ + D +
Sbjct: 75 LEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY 134
Query: 358 FRVANKYESLGNSLSKSVYDGIHR--ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ +K + VY R + + R A +++ M + G E + Y VI
Sbjct: 135 MRMRDK------GIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVI 188
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G + +A + +EM G PDI + LI C V + K++++
Sbjct: 189 GGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVS 248
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ +++ I GF + +N A +LL + L P T+ TLI L ++ EA +
Sbjct: 249 PNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRG--LTPDVITYNTLICGLCKNFKVVEAEH 306
Query: 536 LLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
LR M + Y P + I K G +++A + L+ + K + P + Y +
Sbjct: 307 YLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLC 366
Query: 592 NEG 594
+G
Sbjct: 367 QDG 369
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 87/175 (49%), Gaps = 3/175 (1%)
Query: 365 ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ +G L+ V Y+ + L K + EAE ++ M N G+EPD TY+ +I G CK G
Sbjct: 275 DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLG 334
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
++A +L + G +PD T+ LI G C ++DRA+ F + MEK + L +
Sbjct: 335 MMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCN 394
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
L+ G Q + A KL+ EM E P T+ +I L + +A NL+
Sbjct: 395 TLVKGLSQQGLILQALKLMNEMSEN-GCSPDIWTYNLVINGLCKIGCVSDADNLV 448
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 166/405 (40%), Gaps = 45/405 (11%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D D ++A FN +K +P+ + + +++ L + + Q + M E+ C +
Sbjct: 368 DGDIDRAINVFNEAMEKG-LKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIW 426
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLE 224
TY ++ L K SD + +D +AK L DV + D KKL+
Sbjct: 427 TYNLVINGLCKIGCVSD-----------ADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLK 475
Query: 225 -DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
D IE+ D W + G + ITYN IL L +
Sbjct: 476 LDNAIEIVDRM--------------------W---NHGVSPDVITYNSILNGLCKAGKYE 512
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
D + M ++G +I TY ++ F K R +E+A+ L E M + P V + L+
Sbjct: 513 DVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLM 572
Query: 344 RSISSINNPDLGLVFRVANKY-ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ +N DL +++ + E S + + Y+ + A + AEK+ M
Sbjct: 573 KGFC--DNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCEN 630
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF PD+ TY +I G CK G + L E G IP + T+ ++ C V A
Sbjct: 631 GFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEA 690
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ M+ K + +V+ F + K+ A K++VE + K
Sbjct: 691 VGIIHLMVHKGI-----VPEVVNTIFEADKKEVAAPKIVVENLMK 730
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S + ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EMI K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMIMK-GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLL 404
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ ++ M G +PD TY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWX 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ KP + L+ + DL F + L Y +
Sbjct: 296 QDLIDEMIMKGLKPDKFTYTTLIDG--NCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYK 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 111/433 (25%), Positives = 187/433 (43%), Gaps = 33/433 (7%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKASDL 183
F P+S ++++LR ++ L+ M++ + TY L + G+ + K A+ L
Sbjct: 98 FLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRL 157
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDV-VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+F KE+ V L +L S D G+ E + + +T ++
Sbjct: 158 EQAMEF----FKEMKASGVEPDLESYHILLSALSDS-GRMAEAHALFSA----MTCSPDI 208
Query: 243 RIYPVKALGFFRWVGE------------HSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
Y V G+ + +G+ +GY+ N TY+ I+ + + V + W V
Sbjct: 209 MTYNVLMDGYCK-IGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFM 267
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + + T+ + F K M+EDA+KLF M K ++ + L+ S+
Sbjct: 268 KMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCK-- 325
Query: 351 NPDLGLVFRVA---NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G V+ NK E G + + Y+ + + R EA + M+ P+
Sbjct: 326 --KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPN 382
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
ITYS +I GLCK R ++A L++M+ +G P + T+ LI G C E+ ALL F
Sbjct: 383 VITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFE 442
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
KM + + + LI+G +R N +LL M +P T+ LI L A
Sbjct: 443 KMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHM-HAEGCKPDVITYNCLISGLCSA 501
Query: 528 RRLEEAMNLLRLM 540
R+E+A L M
Sbjct: 502 NRVEDAQRLFDGM 514
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 162/355 (45%), Gaps = 17/355 (4%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FR + + + + ++N +LR VRD +++M+K + TY +
Sbjct: 86 ALKLFREM-QAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVL 144
Query: 309 RQF----QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + +E A++ F+ M +P ++ +LL ++S D G + +
Sbjct: 145 KGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALS-----DSGRMAEAHALF 199
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
++ S Y+ + K+G+ EA+ +MK + AG+EP+ TYS +I CK +
Sbjct: 200 SAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKV 259
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E+A V +M E+ C+P+ T+ LI G C A ++ A+ FA+M + A + L
Sbjct: 260 EEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTL 319
Query: 485 INGFLSQKRVNGAYKL--LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
I+ L +KR G Y L +E L P T+ +LI+ ARRL EAM M+
Sbjct: 320 IDS-LCKKR-GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEG 377
Query: 543 QNYPPFP--EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
+ P + + K +++A++ L+ + Y P+ Y + F G
Sbjct: 378 KCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCG 432
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 158/383 (41%), Gaps = 45/383 (11%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N TYN ++R + + +V +MK G + T + + M A+
Sbjct: 28 FAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSAL 87
Query: 322 KLFEFMMDGPYKPSVQDCSLLLR--------------------SISSINNPDLGLVF--- 358
KLF M GP+ P+ ++LLR S SS+ LV
Sbjct: 88 KLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGL 147
Query: 359 ----RVANKYESLGNSLSKSVYDGIH----------RALTKLGRFDEAEKMMKAMKNAGF 404
+ AN+ E + G+ AL+ GR EA + AM +
Sbjct: 148 CWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS-- 205
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD +TY+ ++ G CK G+ +A +++ E+ + G P++ T++I+I +C ++V+ A
Sbjct: 206 -PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWE 264
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F KM+E N +A + LI GF + A KL EM EK+ + T+ TLI+ L
Sbjct: 265 VFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM-EKIGCKATIVTYNTLIDSL 323
Query: 525 LGAR-RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG---TVEDASEFLKALSVKEYPSS 580
R + A++L ++ P + I F + +A ++ + K P+
Sbjct: 324 CKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNV 383
Query: 581 AAYLQVFESFFNEGRHYEAKDLL 603
Y + + R EA L
Sbjct: 384 ITYSILIDGLCKVRRMKEAAKTL 406
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 111/245 (45%), Gaps = 7/245 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E G K +TYN ++ L + V ++ +++ G I TY + + F R
Sbjct: 305 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARR 364
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A++ F+ M+G P+V S+L+ + + + + ++ G + + Y
Sbjct: 365 LSEAMQYFD-EMEGKCAPNVITYSILIDGLCKVRR--MKEAAKTLEDMKAHGYTPTVVTY 421
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
G+ K G A + MK AG P+ + ++ +I GLCKA R D +L M
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHA 481
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC PD+ T+ LI G C+AN V+ A F M + + LI G +QK+V
Sbjct: 482 EGCKPDVITYNCLISGLCSANRVEDAQRLFDGMA---CAPNVTTFNFLIRGLCAQKKVEE 538
Query: 497 AYKLL 501
A +L
Sbjct: 539 ARNIL 543
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 8/222 (3%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ D+A ++ K + F P+ TY+ +I G CK G+ A +V +M+ +G +P+ T
Sbjct: 12 KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 71
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM--- 504
L+ G C ++ AL F +M + + ++L+ GF RV A L +M
Sbjct: 72 TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKS 131
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGT 561
V + K L + A RLE+AM + MK P E + + +S G
Sbjct: 132 SSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGR 191
Query: 562 VEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ +A A++ P Y + + + G+ YEA+ L+
Sbjct: 192 MAEAHALFSAMTCS--PDIMTYNVLMDGYCKIGQTYEAQSLM 231
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 127/288 (44%), Gaps = 14/288 (4%)
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
R + A++LF+ ++ G + P+ ++L+R + V + +S G + S
Sbjct: 11 RKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFC--KGGQMHQAVSVFSDMKSSGLLPNAS 68
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + L ++G+ A K+ + M+ F P + +++ ++ G AGR DA L +M
Sbjct: 69 TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128
Query: 435 EENGCIPDIKTWTILIQGHC----AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
++ T+ ++++G C +AN +++A+ F +M + D + +L++
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSD 188
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
R+ A+ L M P T+ L++ + EA +L++ + K Y P
Sbjct: 189 SGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVF 244
Query: 551 PF---VQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEG 594
+ + K VE+A E F+K + P++ + + F G
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAG 292
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/321 (21%), Positives = 132/321 (41%), Gaps = 22/321 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + P+ YS+++ D +++ W +M E +C T+ +++ KA
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 182 DLAALNQFHD----GMVKEIA-----MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD 232
D A+ F + G I +D++ K V D +K+ I +
Sbjct: 296 D--AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYN 353
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ + R+ +A+ +F E G N ITY+ ++ L + +++ +E+
Sbjct: 354 SLIQGFCDARRLS--EAMQYFD---EMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLED 408
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
MK GY + TY + F K ++ A+ FE M P+ + L+ +
Sbjct: 409 MKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAER 468
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+ GL R+ + G Y+ + L R ++A+++ M A P+ T+
Sbjct: 469 ANDGL--RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTF 523
Query: 412 SQVIFGLCKAGRFEDACNVLD 432
+ +I GLC + E+A N+LD
Sbjct: 524 NFLIRGLCAQKKVEEARNILD 544
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 80/194 (41%), Gaps = 9/194 (4%)
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GL A + + A + E+ P+ T+ +LI+G C ++ +A+ F+ M
Sbjct: 6 GLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLP 65
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+A ++ L+ G +++ A KL EM + P A+ L+ A R+ +A+
Sbjct: 66 NASTMNTLLLGLCEIGQMSSALKLFREM-QAGPFLPTSASHNILLRGFFMAGRVRDALAH 124
Query: 537 LRLMKKQNYPPFPEPFVQYISKF-------GTVEDASEFLKALSVKEY-PSSAAYLQVFE 588
L+ M+K + + + +E A EF K + P +Y +
Sbjct: 125 LQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLS 184
Query: 589 SFFNEGRHYEAKDL 602
+ + GR EA L
Sbjct: 185 ALSDSGRMAEAHAL 198
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 14/380 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N + YN ++ L + + V + + +++ + + D+ TY + K +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
E +++ + M+ + PS S L+ + + L LV RV + G S + V
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD----FGVSPNLFV 369
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + +L K +F EAE + M G P+++TYS +I C+ G+ + A + L EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G + + LI GHC ++ A A+M+ K + L+ G+ S+ ++N
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L EM K + P TF TL+ L A + +A+ L M + N P +
Sbjct: 490 KALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 556 ISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK---DLLYKCPH 608
I + G + A EFLK ++ K P + +Y + G+ EAK D L+K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 609 HIRQDSKISLLFGSAKSNKV 628
+ + LL G + K+
Sbjct: 609 ELNEICYTGLLHGFCREGKL 628
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 147/359 (40%), Gaps = 29/359 (8%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE-----------------SVRDFWNV 288
P L FF ++G H G+ H+T ++ ++ L + D +NV
Sbjct: 84 PKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNV 143
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLRSIS 347
+ ++ ++ + + + + R + D V +F+ M+ P V+ S LL +
Sbjct: 144 LFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLV 203
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ GL + N S+G +Y G+ R+L +L A++M+ M+ G + +
Sbjct: 204 KFRH--FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ +I GLCK + +A + ++ PD+ T+ L+ G C E + L
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M+ + + L+ G + ++ A L+ +++ + P + LI+ L
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKG 380
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFL-----KALSVKEYP 578
R+ EA L M K P + I F G ++ A FL L + YP
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 165/420 (39%), Gaps = 35/420 (8%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP +Y+ ++R+L L + + M+ C + Y ++ L K +K +
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
+ + G K++ D V + L + +IG +E+ D + LR
Sbjct: 283 GIKKDLAG--KDLKPDVVTYCTLVYGLCKVQEFEIG-------LEMMDEMLC-----LRF 328
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
P +A + ++ L + + + N+V+ + G ++ Y
Sbjct: 329 SPSEA------------------AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ K R +A LF+ M +P+ S+L+ D L F +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF--LGEM 428
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G LS Y+ + K G AE M M N EP +TY+ ++ G C G+
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + EM G P I T+T L+ G A + A+ F +M E N + +V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G+ + ++ A++ L EM EK + P +++ LI L + EA + + K N
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 16/338 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + YN ++ + + + EM + E + TY + + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVY 376
A++L+ M PS+ + LL + GL+ ++ N+ ++ Y
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRA-----GLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + G +A + +K M G PD +Y +I GLC G+ +A +D + +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C + +T L+ G C +++ AL +M+++ D D VLI+G L K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
+ LL EM ++ L+P + ++I+ +EA + LM + P + I
Sbjct: 666 FFGLLKEMHDR-GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 557 S---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+ K G V +A + L K P S+ QV F
Sbjct: 725 NGLCKAGFVNEA----EVLCSKMQPVSSVPNQVTYGCF 758
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 140/348 (40%), Gaps = 13/348 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TY ++ + + EM +G I T+ + + ++ DAVKLF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + KP+ ++++ D+ F + G Y + L
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCE--EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G+ EA+ + + E + I Y+ ++ G C+ G+ E+A +V EM + G D+
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK---LL 501
+ +LI G + DR L F ++++ +D DV+ + K G +K +
Sbjct: 649 CYGVLIDG--SLKHKDRKL--FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
+++ P + T+ +I L A + EA L M+ + P + ++
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 560 GTV--EDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G V + A E A+ ++A Y + F +GR EA +L+ +
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 257 GEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
G H G + N I Y G+L R + + +V +EM + G ++D+ Y + K +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ L + M D KP + ++ + S D F + + + G ++
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG--DFKEAFGIWDLMINEGCVPNEVT 719
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS----------------------- 412
Y + L K G +EAE + M+ P+ +TY
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 413 ------------QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+I G C+ GR E+A ++ M +G PD T+T +I C N+V
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+A+ + M EK D + LI+G + A +L EM+ + L P T +T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIPNNKTSRT 897
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 175/396 (44%), Gaps = 22/396 (5%)
Query: 237 TVLKELRIY--PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV---RDFWNVVEE 291
TV + LR+ P KAL FF W E G+ HN +Y +L +L R ++ R+F ++
Sbjct: 88 TVFEVLRLIKTPSKALQFFNWAPEL-GFTHNDQSYFLMLEILGRARNLNVARNFLFSIKR 146
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+++ + + R + K + +++V++F M PSV + LL +
Sbjct: 147 RSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGR 206
Query: 352 PDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
++ VF + G + ++ + R K DE + K M +PD +T
Sbjct: 207 TNMAQSVF--DEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVT 264
Query: 411 YSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
Y+ ++ GLC+AG+ A NV++ M + PD+ T+T L++G+C +E+D AL+ F +
Sbjct: 265 YNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEE 324
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K + + LI G ++++ ++ + P T TL+ A
Sbjct: 325 MVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAG 384
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-------- 577
L +A+ + M N P + ++ + + G E A + LS KE
Sbjct: 385 NLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCT 444
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
P AAY +FE G+ +A+ + + QD
Sbjct: 445 PLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQD 480
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 116/505 (22%), Positives = 210/505 (41%), Gaps = 50/505 (9%)
Query: 97 SVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL---KQFWVTLR 153
+V VLR L P KA FFNW + F + Y LML L +L + F +++
Sbjct: 88 TVFEVLR-LIKTPSKALQFFNWA-PELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIK 145
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
R +E+ + S++ KA F + + +M +V + V S
Sbjct: 146 RRSNGTVKLEDRFFNSLIRSYGKA---------GLFQESVQVFNSMKSVGVSPSVVTFNS 196
Query: 214 DWDDKIGKKLEDMKIELSDNFVLT--VLKELRIYPVKALGF---------FRWVGEHSGY 262
+ + +M + D + T V + + + GF FR+ E S +
Sbjct: 197 LLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRF 256
Query: 263 K--HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMME 318
K + +TYN ++ L R V NVV M K+ + D+ TY + R + ++
Sbjct: 257 KCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEID 316
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE-SLGNS---LSKS 374
+A+ +FE M+ KP+ + L++ + + D ++ +E +LG
Sbjct: 317 EALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKID-----KIKQIFEGALGGGGFIPDTC 371
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A G ++A ++ + M PD+ TYS +I LC+ G FE A + DE+
Sbjct: 372 TLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDEL 431
Query: 435 EE-------NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
E +GC P + + + + C + +A F ++M++ D +LI G
Sbjct: 432 SEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKG 490
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ Y+LLV M+ + P T+++LI+ LL A L M K ++ P
Sbjct: 491 HCREGTFEAGYELLVLMLRR-DFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVP 549
Query: 548 FPEPFVQYISKF---GTVEDASEFL 569
F +++ G +++ F+
Sbjct: 550 ETSTFHSILARLLAKGCAHESARFI 574
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 120/569 (21%), Positives = 221/569 (38%), Gaps = 87/569 (15%)
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL---KQFWVTL 152
++ V+ + +L P KA FFNW + F + Y LML L +L + F ++
Sbjct: 86 KTTVFEVLRLIKTPSKALQFFNWA-PELGFTHNDQSYFLMLEILGRARNLNVARNFLFSI 144
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
+R +E+ + S++ KA F + + +M +V + V
Sbjct: 145 KRRSNGTVKLEDRFFNSLIRSYGKA---------GLFQESVQVFNSMKSVGVSPSVVTFN 195
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLT--VLKELRIYPVKALGF---------FRWVGEHSG 261
S + + +M + D + T V + + + GF FR+ E S
Sbjct: 196 SLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSR 255
Query: 262 YK--HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMM 317
+K + +TYN ++ L R V NVV M K+ + D+ TY + R + +
Sbjct: 256 FKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEI 315
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A+ +FE M+ KP+ + L++ + + D K +++
Sbjct: 316 DEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDK-----------------IKQIFE 358
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G A+ GF PD T + ++ C AG DA V ++M
Sbjct: 359 G-------------------ALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVL 399
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS------- 490
PD T+++LI+ C +RA F ++ EK D L+ + S
Sbjct: 400 NVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCR 459
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ A ++ +++++ P +FK LI+ E LL LM ++++ P E
Sbjct: 460 NGKTAKAERVFRQLMKRGTQDPL--SFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLE 517
Query: 551 PFVQYISKFGTVEDASEFL------KALSVKEYPSSAAYLQVFESFFNEG-RHYEAKDLL 603
+ I G ++ + K + P ++ + + +G H A+ ++
Sbjct: 518 TYQSLID--GLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIM 575
Query: 604 YKCPHHIRQDSKIS-----LLFGSAKSNK 627
IRQ+ +S LLFGS +K
Sbjct: 576 LMLEGKIRQNINLSTHTVRLLFGSGLRDK 604
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 220/522 (42%), Gaps = 64/522 (12%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
LS T ++ LR+ ND A +W + FRP+S++Y +LR L S
Sbjct: 48 LSSNFTPAQLLDTLRR-QNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFNSM 106
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
L+ MK C I+ L + K + ++ + + V E+ TL+
Sbjct: 107 KDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEILCIVE-----VMEVEFGLALDTLL- 160
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
++ + ++ K++L +N T++ + G K + T
Sbjct: 161 ------YNFLLNVLVDGNKLKLVENVHSTMVSK-------------------GIKPDVST 195
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N +++ L + +R V+EEM G D T+ + + F + M+ A ++ E M+
Sbjct: 196 FNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQML 255
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
D + ++L+ + L F + + N G+
Sbjct: 256 DAGCPVTNVTVNVLVHGFCKEGRIEEALSF-----IDEMSNE----------------GK 294
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
A ++ MKN G +PD TY+ +I LC G+ ++A +L EME +GC ++ T+
Sbjct: 295 HTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNT 354
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI G C +++ A F +M + ++ + LI+G +RV A +L+ +MI +
Sbjct: 355 LIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIME- 413
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY------ISKFGTV 562
L+P + T+ +++ +++A ++++ M P V Y + K G V
Sbjct: 414 GLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEP---DIVTYGTLIGGLCKAGRV 470
Query: 563 EDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLL 603
E AS L+++ +K + AY V ++ F R EA L
Sbjct: 471 EVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLF 512
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 126/300 (42%), Gaps = 41/300 (13%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ALG R + E SG N ITYN ++ +++ + + + ++M+ +G + TY +
Sbjct: 332 EALGLLREM-EISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTL 390
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K R +++A +L + M+ KP
Sbjct: 391 IDGLCKSRRVQEAAQLMDQMIMEGLKPD-------------------------------- 418
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
K Y+ + + G +A +++ M + G EPD +TY +I GLCKAGR E A
Sbjct: 419 -----KFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVA 473
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L ++ G + + +IQ A+ F +M EK DA ++ G
Sbjct: 474 SRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVFRG 533
Query: 488 FL-SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL-MKKQNY 545
S + A ++EMIEK L P ++F L E L + + L+ L M+K N+
Sbjct: 534 LSNSGGPIGEAVDFVIEMIEKGFL-PEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANF 592
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 120/291 (41%), Gaps = 39/291 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G + + TYN ++ L +++ ++ EM+ G ++ TY + F K + +
Sbjct: 306 KNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKI 365
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A ++F+ M E G S + Y+
Sbjct: 366 EEAEEIFDQM-------------------------------------EIQGLSRNSVTYN 388
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K R EA ++M M G +PD TY+ ++ C+ G + A +++ M N
Sbjct: 389 TLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSN 448
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PDI T+ LI G C A V+ A + K + +I +KR A
Sbjct: 449 GCEPDIVTYGTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEA 508
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARR-LEEAMNLLRLMKKQNYPP 547
+L EM EK P T+K + L + + EA++ + M ++ + P
Sbjct: 509 MRLFREMEEKGN-TPDAFTYKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLP 558
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 155/350 (44%), Gaps = 13/350 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + T+ ++R L + + ++ ++M EG++ ++ TY + K A
Sbjct: 130 GHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAA 189
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M G +P V + ++ S+ + + F + ++ G S Y +
Sbjct: 190 IRLLRSMEQGNCQPDVVIYTSIIDSLC--KDRQVTEAFNLFSQMVGQGISPDIFTYTSLV 247
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ PD + +S V+ LCK G+ +A ++D M + G
Sbjct: 248 HALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVE 307
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ GHC +E+D A+ F M+ K + D LING+ +++ A L
Sbjct: 308 PDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYL 367
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
EM K + P T+ TL+ L RL++A+ L M + P V Y
Sbjct: 368 FEEMCRKEWI-PDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMP---DLVTYSILLD 423
Query: 556 -ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K +E+A LKA+ P Y + + G A+DL
Sbjct: 424 SLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLF 473
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 143/350 (40%), Gaps = 42/350 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E + + + Y I+ L + V + +N+ +M +G DI TY +
Sbjct: 197 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 256
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ L M++ P V ++
Sbjct: 257 KHVTTLLNQMVNSKILPDV-------------------------------------VIFS 279
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K G+ EA +++ M G EPD +TY+ ++ G C ++A V D M
Sbjct: 280 TVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRK 339
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ ++T LI G+C +++D+A+ F +M K + D + L+ G R+ A
Sbjct: 340 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
L EM+ + ++ P T+ L++ L R LEEAM LL+ ++ N P + + +
Sbjct: 400 IALFHEMVARGQM-PDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458
Query: 555 YISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + G +E A + LS K +PS Y + G EA L
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLF 508
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 179/427 (41%), Gaps = 47/427 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + LR M++ +C + Y SI+ L K ++ ++
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTE-- 223
Query: 185 ALNQFHDGMVKEIAMDNVAKT-LVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + I+ D T LV + +W V T+L ++
Sbjct: 224 AFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW-----------------KHVTTLLNQM 266
Query: 243 ---RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+I P + + ++ ++ L + V + +V+ M + G E
Sbjct: 267 VNSKILP------------------DVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VF 358
D+ TY + M++AVK+F+ M+ + P V + L+ I+ D + +F
Sbjct: 309 DVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLF 368
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ E + ++ Y+ + L +GR +A + M G PD +TYS ++ L
Sbjct: 369 EEMCRKEWIPDT---KTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 425
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK E+A +L +E + PDI+ + I+I G C A E++ A F+ + K
Sbjct: 426 CKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 485
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+++I+G + +N A KL +EM + P T+ T+ L A+ LL
Sbjct: 486 WTYNIMIHGLCKRGLLNEANKLFMEM-DGNDCSPDGCTYNTIARGFLQNNETLRAIQLLE 544
Query: 539 LMKKQNY 545
M + +
Sbjct: 545 EMLARGF 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 99/214 (46%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+V ++L+ S +N +G F V K LG+ + + + R L G+ EA
Sbjct: 98 PNVYTLNILINSFCHLNR--VGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEAL 155
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M + GF+P+ +TY +I GLCK G A +L ME+ C PD+ +T +I
Sbjct: 156 HLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSL 215
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F++M+ + D L++ + LL +M+ ++ P
Sbjct: 216 CKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNS-KILPD 274
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L ++ EA ++ +M ++ P
Sbjct: 275 VVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEP 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 1/142 (0%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K + ++ +M+ G P++ T ILI C N V A
Sbjct: 63 PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
AK+++ + D LI G + ++ A L +MI++ +P T+ TLI L
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE-GFQPNVVTYGTLINGLC 181
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
A+ LLR M++ N P
Sbjct: 182 KVGNTSAAIRLLRSMEQGNCQP 203
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 163/367 (44%), Gaps = 40/367 (10%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P +AL F V E G+ HN TY IL LA+ + + V+ +M E + ++
Sbjct: 143 PQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEGIFL 202
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPY---KPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+ + F K + E V++F+ + P KPS++ S L + N +
Sbjct: 203 NLMKHFSKLSLHERVVEMFDAIX--PIVREKPSLKAISTCLNLLVESNQSSI-------- 252
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE-PDNITYSQVIFGLCKA 421
K G D A ++++ MK + P+ ITYS +I GLC +
Sbjct: 253 --------------------TAKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGS 292
Query: 422 GRFEDACNVLDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
GR ++A + +EM ++ +PD T+ LI G C +VDRAL M + + +
Sbjct: 293 GRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMKKNGCNPNVFN 352
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+NGF + R+ A ++ EM + + L+P + TLI A R++EAM LL+ M
Sbjct: 353 YSALMNGFCKEGRLEEAKEVFDEM-KSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDM 411
Query: 541 KKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRH 596
+ F + + + G E+A L+ L + Y + A+Y V S EG
Sbjct: 412 XENKCRADTVTFNVILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGEL 471
Query: 597 YEAKDLL 603
+A L+
Sbjct: 472 QKATQLV 478
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 102/491 (20%), Positives = 204/491 (41%), Gaps = 65/491 (13%)
Query: 91 PK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
PK ++HES + ++++ + DP++A FN V +++ F ++ Y+ +L L +
Sbjct: 125 PKFISHESAINLIKR-ETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAID 183
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDV 209
L +M + C E +L+++ K + + +V+E T +++
Sbjct: 184 AVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIXPIVREKPSLKAISTCLNL 243
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
++ S+ I K D+ + V++E++ H Y N ITY
Sbjct: 244 LVESN-QSSITAKNGDI------DSAFEVVEEMK-------------KSHVSYP-NLITY 282
Query: 270 NGILRVLARHESVRDFWNVVEEM-KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+ ++ L +++ + EEM K+ D TY + F ++ A+K+ EFM
Sbjct: 283 STLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGXKVDRALKIMEFMK 342
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P+V + Y + K GR
Sbjct: 343 KNGCNPNVFN-------------------------------------YSALMNGFCKEGR 365
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+EA+++ MK+ G +PD + Y+ +I C+AGR ++A +L +M EN C D T+ +
Sbjct: 366 LEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNV 425
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
++ G C + A ++ + + +++N + + A +L+ M+ +
Sbjct: 426 ILGGLCREGRFEEAXGMLERLPYEGVYLNKASYRIVLNSLCREGELQKATQLVGLMLGRG 485
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDA 565
L P AT L+ L A ++ +A+ L + + + P P + V+ I + + A
Sbjct: 486 VL-PHFATSNELLVHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPA 544
Query: 566 SEFLKALSVKE 576
E L L ++E
Sbjct: 545 FELLDDLVIQE 555
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 128/298 (42%), Gaps = 3/298 (1%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ FF+W G Y H T++YN +L VLA+ + +M G + TY + R
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLR 60
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ + E+A +F M P+V S+L+ + D + N+ G+
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAA--ELLNEMIDGGH 118
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ Y + L K+G+ EA + M G PD + Y+ +I G K G +A
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM E GCIP + T+ L+ G E R F M+ + + + L++GF
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A++L +EM + P ++ TLI + + EA LLR M + P
Sbjct: 239 KMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGP 295
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 121/251 (48%), Gaps = 5/251 (1%)
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
V+ N + G + Y + R+L + RF+EA + + M G P+ +YS +I
Sbjct: 36 VYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIA 95
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLC+ + ++A +L+EM + G P++ T+ L+ G C ++ A+ F++M+ +
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D + +VLI+GF + + AY+L EM+EK + P T+ +L+ +L
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSL 214
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFN 592
+ M +Q P F + F + D E FL+ S+ P +Y + +
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCS 274
Query: 593 EGRHYEAKDLL 603
+G+ +EA+ LL
Sbjct: 275 KGKPHEAQRLL 285
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 176/438 (40%), Gaps = 36/438 (8%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
AFF W + + + Y+ +L L + T M C TY +L
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRS 61
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
L +A++ + ++ + GM + NV + ++ G K+ D EL +
Sbjct: 62 LCQAQRFEEARSVFR---GMAAQGCSPNVFSYSI-LIAGLCRGQKV-----DEAAELLNE 112
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ G++ N +TY +L L + +++ ++ M
Sbjct: 113 MI-----------------------DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
G D Y + F K M +A +LFE M++ P+V + LL S +
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS--RKGE 207
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
G V + G + ++ + K+G EA ++ M++ G PD ++Y+
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I G+C G+ +A +L EM +G PDI ++ ILI G+ + +D A+ F ++ +
Sbjct: 268 LIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ DA +I+ +V A+ + +MI P A L+ L RL E+
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS-APDAAVVIPLVIGLCRGERLTES 386
Query: 534 MNLLRLMKK-QNYPPFPE 550
L + M K + P PE
Sbjct: 387 CELFQAMVKFECVPLIPE 404
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 151/408 (37%), Gaps = 62/408 (15%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P++ Y +LR+L ++ R M C +Y ++ L + +K + A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 187 -NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD--KIGKKLEDMKIELSDNFVLTVLKELR 243
N+ DG + NV V GS K+GK E + + S +
Sbjct: 110 LNEMIDGGHQP----NV------VTYGSLLSGLCKMGKLKEAVDL-FSRMVYRGCPPDGV 158
Query: 244 IYPVKALGF---------FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+Y V GF +R E G TYN +L +R ++ ++M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
++G +I T+ + F K M +A +LF M P V + L+R + S P
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKP 278
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
R+ + G Y+ + +K G D A K+ + +G EPD +YS
Sbjct: 279 HEAQ--RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336
Query: 413 QVIFGLCKAG-----------------------------------RFEDACNVLDEMEEN 437
+I LC+AG R ++C + M +
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF 396
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
C+P I + +L+ C A D F ++ E+ + D ++ V++
Sbjct: 397 ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 5/200 (2%)
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++Y+ ++ L K+GR + ++M GC+P+ T+ L++ C A + A F
Sbjct: 17 TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M + + +LI G ++V+ A +LL EMI+ +P T+ +L+ L
Sbjct: 77 GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGH-QPNVVTYGSLLSGLCKM 135
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAY 583
+L+EA++L M + PP + I F D E F + L P+ Y
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ F +G + L
Sbjct: 196 NSLLSGFSRKGEFGRVQSLF 215
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 148/359 (41%), Gaps = 36/359 (10%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ S++ L K+ E F V + P VY++++ K + + +
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMV--YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M E C TY S+L + + + +L F D M+++ + N+ T +++
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSL--FKD-MLRQGCVPNIF-TFNNLL-- 234
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
D K+G +E ++ L E+R G + ++YN +
Sbjct: 235 -DGFCKMGDMVEAHRLFL----------EMR---------------SLGCPPDVVSYNTL 268
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+R + + ++ EM + G DI +Y + + K ++ A+KLF +
Sbjct: 269 IRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P S ++ + +G F V + G++ +V + L + R E+
Sbjct: 329 EPDAFSYSTIIDCLCRAGK--VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
++ +AM P Y+ +++ LCKA R +D C + E+ E G PD++ ++++
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 3/282 (1%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
ITYN ++ L + + +EM +G DI TY + K + A F
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M+ KP + R + + D + F + + + G Y+ AL +
Sbjct: 450 EMLSKGLKP--DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G F+EA +++ M + G PD++TY+ +I G K G A V +EM G P + T
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T+LI H A +D A + F+KM+EK+ A+ + +ING +R++ AYK EM
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EK L P + ++ LI + EEA+ L R M + P
Sbjct: 628 EKGIL-PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 46/405 (11%)
Query: 213 SDW-DDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
++W D+ G + D + + VL +RI P AL FFRWV +K + +
Sbjct: 71 NNWVSDQFGAVITD------PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCA 124
Query: 272 ILRVLARHESVRDFWNVVE--------------------------EMKKEGYEMDIDTYI 305
IL +L ++ + + V+E +M + G D+
Sbjct: 125 ILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCN 184
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+I R + ++ A ++ M KP+V + +L S D L + ++ +
Sbjct: 185 RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL--ELLSEMQ 242
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L+K G ++A+ +++ M N+G TY+ +I G C+ G F
Sbjct: 243 ERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFV 302
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++++EM P + T+ L+ G C +V L F+ M++ + D + L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
G+ ++ A+ L E+ K R L P T+ TLI L L+ A+ L + M Q
Sbjct: 363 YGYCRTGCISEAFLLFDEL--KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 545 YPPFPEPFVQYI-----SKFGTVEDASEFL-KALSVKEYPSSAAY 583
FP+ F I K G V A F + LS P AY
Sbjct: 421 L--FPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 201/497 (40%), Gaps = 29/497 (5%)
Query: 99 VYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL-KQFWVTLRRMK- 156
+ VL + P A FF WV + F+ S V+ +L LV D + +WV R +
Sbjct: 89 IRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSF 148
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN-VAKTLVDVVLGSDW 215
E H ++ VL L +G++ ++ N + + L D L S
Sbjct: 149 EMH---------GVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKA 199
Query: 216 DDKIGKKLEDMKIE---LSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
+ G +E I+ ++ N +L + KE R+ +AL + E Y N +TYN
Sbjct: 200 KNVYGM-MEQFGIKPTVVTYNTMLDSYCKEGRVD--QALELLSEMQERGCYP-NDVTYNV 255
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ L++ + ++EEM G + TY + F + + +A L E M++
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315
Query: 332 YKPSVQDCSLLLRSISS-INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P++ + L+ + + + L F K + + +S ++ + + G
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVS---FNSLLYGYCRTGCIS 372
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA + +K P ITY+ +I GLC G + A + EM + G PDI T+TIL+
Sbjct: 373 EAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILV 432
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G V A F +M+ K D + I G + + A+ + EM+
Sbjct: 433 NGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEML-AAGF 491
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P T+ + L EEA +LL M P + I+ F G + A E
Sbjct: 492 PPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKARE 551
Query: 568 -FLKALSVKEYPSSAAY 583
F + LS PS Y
Sbjct: 552 VFNEMLSKGVAPSVVTY 568
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + ITYN + L + + + +++E M +G D TY I F K +
Sbjct: 489 AGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRK 548
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M+ PSV ++L+ + ++ DL ++ L KSV
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY--------FSKMLEKSV---- 596
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDN-ITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
P N ITY+ +I GLC R ++A DEMEE G
Sbjct: 597 --------------------------PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+P+ ++TILI C + AL + +M+++ D+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 163/383 (42%), Gaps = 40/383 (10%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE + + + V ++K VK + FFRW + Y+H+T TY ++
Sbjct: 73 WGPDAEKALEVLMLRVDHWLVREIMKTDIGVNVK-MQFFRWAAKRRNYEHDTSTYMALIH 131
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYI-KISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L E + W +++EM + + T + ++ R +M+ A+ +F + +
Sbjct: 132 CLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKCQ 191
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFDEA 392
P+ Q + ++ I ++ V + N+ + G+ ++ Y + A KLGR D A
Sbjct: 192 PTAQAYNSMI--IMLMHEGQYEKVHELYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSA 249
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ MK+ G +P Y+ ++ K A ++ +EM C PD+ T+T LI+G
Sbjct: 250 IQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVHGALSLFEEMRHQYCRPDVFTYTELIRG 309
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-------- 504
A +D A F +M + D +++ +IN R++ A KL EM
Sbjct: 310 LGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGTLRCIPS 369
Query: 505 ------------------------IEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLL 537
E+++ + P T+ LI+ R+E+AM LL
Sbjct: 370 VVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLL 429
Query: 538 RLMKKQNYPPFPEPFVQYISKFG 560
M ++ +PP P + I G
Sbjct: 430 EEMDEKGFPPCPAAYCSLIDALG 452
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 102/452 (22%), Positives = 181/452 (40%), Gaps = 77/452 (17%)
Query: 101 VLRKLDNDP--EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK-E 157
V+R L N KA A F + +K +P++ Y+ M+ L+++ ++ M E
Sbjct: 165 VVRMLGNAKMVSKAIAIFYQIKTRK-CQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTE 223
Query: 158 DHCYIEEETYLSILGVLKK-AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD 216
HC+ + TY +++ K ++ S + LN+ D G
Sbjct: 224 GHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDN-------------------GMQPT 264
Query: 217 DKIGKKLEDMKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
KI L + +L+D + L++ +E+R H + + TY ++R
Sbjct: 265 TKIYTMLVALFFKLNDVHGALSLFEEMR---------------HQYCRPDVFTYTELIRG 309
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + + ++ EM++EG D + K ++DA+KLF+ M
Sbjct: 310 LGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMINFLGKAGRLDDAMKLFQEMGT------ 363
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
LR I S+ N++ K++++ RA E
Sbjct: 364 -------LRCIPSVVT----------------YNTIIKALFESKSRA-------SEVPSW 393
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ MK +G P + TYS +I G CK R E A +L+EM+E G P + LI
Sbjct: 394 FERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGK 453
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A D A F ++ E + + + V+I R++ A + EM K+ P
Sbjct: 454 AKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEM-NKLGCAPDVY 512
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ L+ L L+EA++ +R M++ P
Sbjct: 513 AYNALMSGLARTGMLDEALSTMRRMQEHGCIP 544
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 171/371 (46%), Gaps = 15/371 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ + +S+ V VLK+ + A FF W + Y H+ ++ ++ LA+
Sbjct: 13 LDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQY 72
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ W+VV+ MK + ++++T+ I R++ + + +E+AV F M P++ + L
Sbjct: 73 QLMWDVVKVMKSKRM-VNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFNGL 131
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ N V + ++S+ + Y + K +A ++ + M
Sbjct: 132 LSALCKSKN-----VRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMV 186
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G PD +TY ++ LCKAGR ++A +++EM+ C P +++L+ + N ++
Sbjct: 187 SNGCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIE 246
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M + D + + LI F R+ Y++L EM K + P TF +
Sbjct: 247 DAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCK-GVTPNSRTFNII 305
Query: 521 IEKLLGARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPS 579
+ L+G +EA + LR++K P + + I F + E KAL V +Y
Sbjct: 306 LSSLIGRGETDEAYRVFLRMIKVCE--PDADTYTMMIKMFC---ERDELKKALKVWKYMK 360
Query: 580 SAAYLQVFESF 590
++ +F
Sbjct: 361 LKRFMPSMHTF 371
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 128/308 (41%), Gaps = 39/308 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +NG+L L + ++VR + + +K + + D TY + + K + A ++F
Sbjct: 124 NLAAFNGLLSALCKSKNVRKAQEIFDSIK-DRFVPDSKTYSILLEGWGKDPNLPKAREIF 182
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ +P + +++ + D L + N+ +S + +Y +
Sbjct: 183 REMVSNGCRPDIVTYGIMVDVLCKAGRVDEAL--GIVNEMDSTVCKPTPFIYSVLVHTYG 240
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG------ 438
R ++A M+N G EPD Y+ +I CKA R ++ VL+EM+ G
Sbjct: 241 IENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSR 300
Query: 439 ----------------------------CIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
C PD T+T++I+ C +E+ +AL + M
Sbjct: 301 TFNIILSSLIGRGETDEAYRVFLRMIKVCEPDADTYTMMIKMFCERDELKKALKVWKYMK 360
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
K + VLING + V A LL EMIEK +RP TF L + L+ R
Sbjct: 361 LKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEK-GIRPSGVTFGRLRQLLIKEGR- 418
Query: 531 EEAMNLLR 538
E+ + L+
Sbjct: 419 EDVLKFLQ 426
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 174/404 (43%), Gaps = 26/404 (6%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L+ L++ +++ + V VL+K +N A FF W ++ + S + ++ +L
Sbjct: 9 LDTALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAK 68
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ W ++ MK + ET+ I+ +A+K + A+ F+ M K N
Sbjct: 69 IRQYQLMWDVVKVMKSKR-MVNVETFCIIMRKYARAQKVEE--AVYTFNI-MDKYDVPPN 124
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV------------KA 249
+A + +L + K +K +++ + D FV + + Y + KA
Sbjct: 125 LAA--FNGLLSALCKSKNVRKAQEIFDSIKDRFV----PDSKTYSILLEGWGKDPNLPKA 178
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
FR + + G + + +TY ++ VL + V + +V EM + Y +
Sbjct: 179 REIFREMVSN-GCRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVH 237
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ +EDAV F M + +P V + L+ + N L V+RV N+ + G
Sbjct: 238 TYGIENRIEDAVSTFLEMENNGIEPDVAVYNALIGAFCKANR--LKNVYRVLNEMDCKGV 295
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ + ++ I +L G DEA ++ M EPD TY+ +I C+ + A
Sbjct: 296 TPNSRTFNIILSSLIGRGETDEAYRVFLRMIKVC-EPDADTYTMMIKMFCERDELKKALK 354
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
V M+ +P + T+ +LI G C +V +A + +M+EK
Sbjct: 355 VWKYMKLKRFMPSMHTFQVLINGLCEKGDVTQACVLLEEMIEKG 398
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 211/520 (40%), Gaps = 54/520 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK------- 179
P+ Y++++R L + L++ + M+ C TY +++ +A +
Sbjct: 150 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 209
Query: 180 ----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+L N +G+ K M+ K ++V + + +
Sbjct: 210 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-----REGLAPDVVSYNTL 264
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
LS + L E +L F + + G + +T+ ++ + ++ +V
Sbjct: 265 LSGYCKVGCLHE-------SLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALV 316
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M++ G M+ T+ + F K ++DA+ E M +PSV + L+ +
Sbjct: 317 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 376
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
DL + + E+ Y I K+G D A ++ + M G PD I
Sbjct: 377 GRMDL--ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TYS +I GLC+ R DAC + + M + G PD T+T LI GHC V++AL +M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-----------IEKVRLRPWQATFK 518
+ K D VLING R A++LL ++ + + L +A FK
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 519 TLIEKLLG---ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
+++ L G ++EA + + M +N+ + I + G V A F K +
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEA----KDLLYKCP 607
+ P+S + + + F EG EA +DLL CP
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCP 654
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 150/349 (42%), Gaps = 13/349 (3%)
Query: 261 GYKHNTITYNGILRVL--ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY + YN +L L A S R F + M + G ++ TY + R +E
Sbjct: 113 GYAPSVPAYNAVLLALSDASLPSARRFLS---SMLRHGVAPNVYTYNILVRALCARGRLE 169
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YD 377
+AV + M P+ + L+ + +L RV + GN+ V ++
Sbjct: 170 EAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAG--ELDGAERVVSLMREEGNAKPNLVTFN 227
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K GR + A K+ M G PD ++Y+ ++ G CK G ++ V EM +
Sbjct: 228 SMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQR 287
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD+ T+T LI C A +++A+ A+M E+ + LI+GF + ++ A
Sbjct: 288 GLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDA 347
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
L VE + K ++P + LI R++ A L+R M+ + P + IS
Sbjct: 348 L-LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIIS 406
Query: 558 ---KFGTVEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G ++ A + K L P + Y + E R +A +L
Sbjct: 407 GYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 455
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 217/478 (45%), Gaps = 18/478 (3%)
Query: 78 WSDELENKLEELSPK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
W E K L P +++ S+V+VL K E F ++ P + Y+ M+
Sbjct: 266 WKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDV--PCAYAYNTMI 323
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
+ + + L R++E C ++ SIL L K +K + AL F ++K+
Sbjct: 324 MGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE--ALTLFD--VMKK 379
Query: 197 IAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMKIE-LSDNFVLTVLKELRIYPVKALGFF 253
A N++ ++D++ + ++ K ++M++ L N + + R+ L
Sbjct: 380 DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEA 439
Query: 254 RWVGEHS---GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ E + G N++TY ++ L + + D + + E+M G++ + Y + R
Sbjct: 440 HRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRN 499
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGN 369
F ED K+++ M+ +P + + + + + G +F + L +
Sbjct: 500 FFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPD 559
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S+ IH LTK G+ E + +AM GF D Y+ V+ GLCK+G+ + A
Sbjct: 560 VRSYSIL--IH-GLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYE 616
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
VL+EM+ P + T+ ++ G + +D A + F + K + + L LI+GF
Sbjct: 617 VLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFG 676
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
R++ AY +L EM++K L P T+ +L++ L+ ++EA+ + MK+ P
Sbjct: 677 KVGRIDEAYLILEEMMKK-GLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSP 733
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/319 (24%), Positives = 148/319 (46%), Gaps = 12/319 (3%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+ + V+ VL+ L+ P A FF S YN +L L+ + + V+E
Sbjct: 74 AHDVVVYVLRSLK-NPSLAAPFFLLASASSSQPLPPDAYNAVLPFLSHDLAALE--KVLE 130
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM GY + + + R +EDA ++ M ++P ++L+ +++
Sbjct: 131 EMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEAR 190
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
P+ L + + + +G +S ++ + RAL + G+ + A ++ +K + EPD +
Sbjct: 191 QPERAL--ELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVL 248
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ I KAG + A E++ +G PD ++T ++ C A + A F +M
Sbjct: 249 YNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQME 308
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR---PWQATFKTLIEKLLGA 527
+ A + +I G+ S +R + AYKLL E++R R P +F +++ L
Sbjct: 309 AERDVPCAYAYNTMIMGYGSAERFDDAYKLL----ERLRERGCIPSVVSFNSILTCLGKK 364
Query: 528 RRLEEAMNLLRLMKKQNYP 546
R+++EA+ L +MKK P
Sbjct: 365 RKVDEALTLFDVMKKDAKP 383
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 191/432 (44%), Gaps = 25/432 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
P +Y++ + S+ W +K ++ +Y S++ VL KA + +
Sbjct: 242 LEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAE 301
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE------LSDNFVLTV 238
L + +++ T++ ++ D K LE ++ +S N +LT
Sbjct: 302 ELFGQMEAE-RDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTC 360
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
L + R +AL F + + + K N TYN I+ +L V + + + +EM+ G
Sbjct: 361 LGKKRKVD-EALTLFDVMKKDA--KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLF 417
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP-SVQDCSLL--LRSISSINNPDLG 355
++ + + + K +E+A ++FE + P SV CSL+ L I++
Sbjct: 418 PNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDD---- 473
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI---TYS 412
+R+ K G+ + +Y + R GR ++ K+ K M G PD TY
Sbjct: 474 -AYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYM 532
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+F KAG E + ++M+ G +PD+++++ILI G A + F M ++
Sbjct: 533 DCVF---KAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQ 589
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ DA + +++G +V+ AY++L EM K + P AT+ ++++ L RL+E
Sbjct: 590 GFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVK-HVHPTVATYGSIVDGLAKIDRLDE 648
Query: 533 AMNLLRLMKKQN 544
A L K +
Sbjct: 649 AYMLFEEAKSKG 660
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 155/356 (43%), Gaps = 9/356 (2%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF + H G + + ++Y ++ VL + + + + +M+ E Y + +
Sbjct: 268 FFHELKAH-GLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGY 326
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+DA KL E + + PSV + +L + D L K ++ N
Sbjct: 327 GSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNI- 385
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S Y+ I L GR +EA K+ M+ AG P+ ++ + ++ LCKA + E+A +
Sbjct: 386 --STYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIF 443
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+ E GC P+ T+ LI G ++D A F KM++ +DA+ + LI F
Sbjct: 444 ESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMH 503
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
R +K+ EMI + RP T ++ + A +E+ + MK + P
Sbjct: 504 GRKEDGHKIYKEMIRRGG-RPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRS 562
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDLL 603
+ + ++K G + S +A+S + + A AY V + G+ +A ++L
Sbjct: 563 YSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVL 618
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 119/272 (43%), Gaps = 18/272 (6%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G+ + YN ++ L + V + V+EEMK + + TY I K ++
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKS 374
+A LFE K + +++L S S I+ G V R+ Y E + L+ +
Sbjct: 648 EAYMLFE-----EAKSKGIELNVILYS-SLIDG--FGKVGRIDEAYLILEEMMKKGLTPN 699
Query: 375 VY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
VY + + AL K DEA ++MK P+ TYS +I GLC+ ++ A
Sbjct: 700 VYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQ 759
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM++ G IP++ T+T +I G + A F + D+ + LI G +
Sbjct: 760 EMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNAN 819
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
R AY++ E+ RLR + KT I L
Sbjct: 820 RPMEAYQVF----EETRLRGCRLNVKTCISLL 847
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 69/334 (20%), Positives = 143/334 (42%), Gaps = 9/334 (2%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ RP T+ + + + +++ MK + +Y ++ L KA +A
Sbjct: 518 RRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQAR 577
Query: 182 DLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT--- 237
+ + N F + A+D A +VD + S DK + LE+MK++ V T
Sbjct: 578 ETS--NIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGS 635
Query: 238 -VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
V +I + + G + N I Y+ ++ + + + + ++EEM K+G
Sbjct: 636 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKG 695
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
++ T+ + K +++A+ F+ M + P+ S+L+ + + +
Sbjct: 696 LTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAF 755
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
VF + + L ++ Y + L K+G +A + + K G PD+ +++ +I
Sbjct: 756 VFWQEMQKQGLIPNVV--TYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIE 813
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
G+ A R +A V +E GC ++KT L+
Sbjct: 814 GMSNANRPMEAYQVFEETRLRGCRLNVKTCISLL 847
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 131/288 (45%), Gaps = 14/288 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + IT++ ++ + V D ++ EM + G + TY + F + + A
Sbjct: 383 GCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAA 442
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG---LVFRVANKYE------SLGNSL 371
+ L + M+ P+V C+ LL + NN L +F+V K + N +
Sbjct: 443 LDLLQEMISSGVCPNVVTCNTLLDGLC--NNGKLKDALEMFKVMQKSKMDLDASHPFNDV 500
Query: 372 SKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
V Y+ + L G+F EAE++ + M + G PD ITY+ VI GLCK R ++A
Sbjct: 501 EPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQ 560
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ D M G PD+ T+T LI G+C V L F +M + A+A LI+GF
Sbjct: 561 MFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFC 620
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ L L+ A+ L
Sbjct: 621 QVGNINGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 146/362 (40%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S K N + Y+ I+ L + D N+ EM+++G ++ TY
Sbjct: 229 VSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNC 288
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F +A +L M + P V S+L+
Sbjct: 289 MINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLIN---------------------- 326
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
AL K G+F EAE++ M G P+ ITY+ +I G K R +
Sbjct: 327 ---------------ALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDA 371
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + M GC PD+ T++ILI G+C A VD + +M + A+ LI+
Sbjct: 372 AERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIH 431
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI + P T TL++ L +L++A+ + ++M+K
Sbjct: 432 GFCQLGNLNAALDLLQEMISS-GVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMD 490
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
+ F VE P Y + NEG+ EA++L +
Sbjct: 491 ------LDASHPFNDVE--------------PDVQTYNILICGLINEGKFSEAEELYEEM 530
Query: 607 PH 608
PH
Sbjct: 531 PH 532
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 140/339 (41%), Gaps = 19/339 (5%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + ++DA+ LF +M+ P V D LL + + PD +V + K
Sbjct: 45 LKLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPD--VVISLHRKM 102
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + + A + GF P +T+S ++ GLC R
Sbjct: 103 EMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRV 162
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + ++ C P++ +T L+ G C V A+ +M+E + +
Sbjct: 163 SEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 218
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E R++P + +I+ L R +A NL M+++
Sbjct: 219 VDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKG 278
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P + I+ F G +A L+ + K P + + + EG+ +EA+
Sbjct: 279 ISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAE 338
Query: 601 DLLYK------CPHHIRQDSKISLLFGSAKSNKVTIPSR 633
+L + P+ I +S I G +K N++ R
Sbjct: 339 ELYNEMLPRGIIPNTITYNSMID---GFSKQNRLDAAER 374
>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 182/414 (43%), Gaps = 29/414 (7%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ +KQ L M D C TY +++ KAKK S
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS---VA 578
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
N+ + M+ + NV L+D S +K + M+ +
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD------------- 625
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+ + + + + K N +TY ++ L + V+D +++E M +G E + Y
Sbjct: 626 --IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ F K +++A ++F M++ Y P+V S L+ + + L LV +V +K
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRL--FKDKRLDLVLKVLSKM 741
Query: 365 ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
L NS + ++ Y + L+K+ + DEA K+M M+ G +P+ +TY+ +I G KAG
Sbjct: 742 --LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ + + EM GC P+ T+T+LI CA +D A +M + +
Sbjct: 800 KVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYC 859
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+I G+ KR L+E +EK P +K LI+ + A RLE A+ L
Sbjct: 860 KVIEGY---KREFILSLGLLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALEL 910
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 183/420 (43%), Gaps = 31/420 (7%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKK----LEDMKIELSDNFVLTVLKELRIYPVKA 249
++ + + N A ++D V + DD G+K L + +L+ + V+ +L L+ P
Sbjct: 98 LQTVKISNEAFLILDAV--RNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLK-SPELC 154
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ FF W G GY H Y +L V R R + E++ + E+ + R
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ + + A++ + D YKP+ + L++ + D + V + LG
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL--VHREMSELGL 272
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S+ + +AL K+G++ EA + ++ F P+ I Y+++I GLC+A FE+A +
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
L+ M CIP+++T+ IL+ G ++ R + M+ + + + L++ +
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL---------EEAMNLL--- 537
+ AYKLL +M EK +P + LI + L E+A N +
Sbjct: 390 KSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448
Query: 538 -RLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
++ K N F + + FG E A + + + + P ++ Y +V N R
Sbjct: 449 GTVLNKVNVV----SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 154/392 (39%), Gaps = 62/392 (15%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + TY ++ ++ ++ N ++EM ++G E + TY + + K + +
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577
Query: 320 AVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVAN 362
A +LFE M+ P+V + C + R + PD+ + F++ N
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637
Query: 363 K---------YESLGNSLSKS-----------------------VYDGIHRALTKLGRFD 390
Y +L + L K+ VYD + K + D
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA+++ M G+ P+ TYS +I L K R + VL +M EN C P+I +T +I
Sbjct: 698 EAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + D A M EK + +I+GF +V+ +L EM K
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK-GC 816
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
P T+ LI L+EA LL MK+ +P + + I + EF+
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-----KREFIL 871
Query: 571 ALSVKE-------YPSSAAYLQVFESFFNEGR 595
+L + E P Y + ++F GR
Sbjct: 872 SLGLLEEVEKNGSAPIILLYKVLIDNFVKAGR 903
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 127/571 (22%), Positives = 229/571 (40%), Gaps = 84/571 (14%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKK 179
+K+ F P++ +Y+ M+ L ++ L RM+ C +TY +L G L K +
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQ- 358
Query: 180 ASDLAALNQFHDGMVKEIAMDN--VAKTLVDVVLGSD---WDDKIGKKLEDMKIELSDNF 234
L + M+ E + + +LV SD + K+ KK+E K E +
Sbjct: 359 ---LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKME--KCECKPGY 413
Query: 235 VL----------------------------------TVLKELRI--YPVKALGFFRWVGE 258
V+ TVL ++ + + GF ++
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKA 473
Query: 259 H--------SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ +G+ +T TY+ ++ L V + + + +EMK G D+ TY +
Sbjct: 474 YKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI-----SSINNPDLGLV-----FRV 360
F K +++ A + M+ +P+V + L+ + S+ N L+ F
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPN 593
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGR------FDEAEKMMKAMKNAGFEPDNITYSQV 414
Y +L + KS I +A R + + K N +P+ +TY +
Sbjct: 594 VITYTALIDGYCKS--GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLCKA + +DA ++L+ M +GC P+ + LI G C A ++D A F KM+E Y
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGY 711
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ + LI+ KR++ K+L +M+E P + +I+ L + +EA
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
L+ +M+++ P + I F G V+ E + + K P+ Y +
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 591 FNEGRHYEAKDLLYKC-----PHHIRQDSKI 616
G EA LL + P H+ K+
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 154/436 (35%), Gaps = 96/436 (22%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT----------------- 303
GYK +TYN +++V R + + V EM + G MD T
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295
Query: 304 ---------------YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
Y K+ + E+A+ M P+VQ +LL
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL--CGC 353
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+N LG R+ + + G S ++++ + A K F A K++K M+ +P
Sbjct: 354 LNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413
Query: 409 ITYSQVIFGLCKA-----------------------------------------GRFEDA 427
+ Y+ +I +C G+FE A
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKA 473
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V+ EM NG +PD T++ +I C A+ V+ A F +M D +LI+
Sbjct: 474 YKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F + A+ L EM+ P T+ TLI L A+++ A L LM + P
Sbjct: 534 FSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592
Query: 548 FPEPFVQYISKF---GTVEDASEFLKAL-----------------SVKEYPSSAAYLQVF 587
+ I + G +E A + + +V E P+ Y +
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 588 ESFFNEGRHYEAKDLL 603
+ + +A+DLL
Sbjct: 653 DGLCKAHKVKDARDLL 668
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 158/322 (49%), Gaps = 12/322 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ ++LS V+ VL+ + A FF W G+ +G+ HN+ TYN ++ VL R
Sbjct: 226 LDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQF 285
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
++ EM ++G + ++T+ + F + + AV +FE M + V + L
Sbjct: 286 ESMMGMLGEMGEKGL-LTMETFSIAIKAFAAAKERKKAVGVFELMKRYNFDAGVDTINCL 344
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ L +E L + + ++ Y + ++ EA + M
Sbjct: 345 LDNLGRAK-----LGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMI 399
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF+PD I + ++ GL K + DA + + M+ G P+++T+TILI+ C ++
Sbjct: 400 DKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQ 459
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M++ DA + LI GF +QK+++ Y LL EM EK + T+ L
Sbjct: 460 EAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGR-TYNAL 518
Query: 521 IEKLLGARRLEEAMNLLRLMKK 542
I KL+ R++ + + +R+ KK
Sbjct: 519 I-KLMTNRQMPD--DAVRIYKK 537
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 176/440 (40%), Gaps = 27/440 (6%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E L+E + L+H VV VL + + + A FF W K F +S Y+ M+ L
Sbjct: 222 MEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKAGFTHNSRTYNAMMSVLGR 281
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ L M E E ++I ++ + ++K D
Sbjct: 282 TRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERKKAVGVFE-----LMKRYNFDA 336
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW-----V 256
T ++ +L + K+GK+ + + +L D F LR Y V G+ R
Sbjct: 337 GVDT-INCLLDNLGRAKLGKEAQALFEKLEDRFT----PNLRTYTVLLNGWCRIKNLVEA 391
Query: 257 GE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
G G+K + I ++ +L L + + D + E MK +G ++ TY + R
Sbjct: 392 GRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRD 451
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
K M++AV+ F+ M+D +P + L+ N + V+ + + + G
Sbjct: 452 LCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFG--NQKKMDKVYALLKEMKEKGCP 509
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y+ + + +T D+A ++ K M G + TY+ ++ +E C V
Sbjct: 510 ADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNYEMGCAV 569
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+EM GC PD ++ + I G + A +M+EK A LD N F +
Sbjct: 570 WEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQ--LD--YNKFAA 625
Query: 491 QKRVNGAYKLLVEMIEKVRL 510
G +L E+ K++
Sbjct: 626 DFSRAGKPDILEELARKMKF 645
>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Cucumis sativus]
Length = 1000
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 182/414 (43%), Gaps = 29/414 (7%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ +KQ L M D C TY +++ KAKK S
Sbjct: 522 PDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS---VA 578
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
N+ + M+ + NV L+D S +K + M+ +
Sbjct: 579 NELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDAD------------- 625
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+ + + + + K N +TY ++ L + V+D +++E M +G E + Y
Sbjct: 626 --IPDVDMYFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVY 683
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ F K +++A ++F M++ Y P+V S L+ + + L LV +V +K
Sbjct: 684 DALIDGFCKAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRL--FKDKRLDLVLKVLSKM 741
Query: 365 ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
L NS + ++ Y + L+K+ + DEA K+M M+ G +P+ +TY+ +I G KAG
Sbjct: 742 --LENSCAPNIVIYTEMIDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAG 799
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ + + EM GC P+ T+T+LI CA +D A +M + +
Sbjct: 800 KVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYC 859
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+I G+ KR L+E +EK P +K LI+ + A RLE A+ L
Sbjct: 860 KVIEGY---KREFILSLGLLEEVEKNGSAPTILLYKVLIDNFVKAGRLEVALEL 910
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 31/420 (7%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKK----LEDMKIELSDNFVLTVLKELRIYPVKA 249
++ + + N A ++D + + DD G+K L + +L+ + V+ +L L+ P
Sbjct: 98 LQTVKISNEAFLILDAI--RNCDDGFGEKTHIVLRQFRQKLNPDLVVEILSFLK-SPELC 154
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ FF W G GY H Y +L V R R + E++ + E+ + R
Sbjct: 155 VKFFLWAGRQIGYDHTPAVYIALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIR 214
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ + + A++ + D YKP+ + L++ + D + V + LG
Sbjct: 215 KCCRNGLWNVALEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQL--VHREMSELGL 272
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S+ + +AL K+G++ EA + ++ F P+ I Y+++I GLC+A FE+A +
Sbjct: 273 SMDEFTLGFFAQALCKVGKWREA---LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMD 329
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
L+ M CIP+++T+ IL+ G ++ R + M+ + + + L++ +
Sbjct: 330 FLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYC 389
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL---------EEAMNLL--- 537
+ AYKLL +M EK +P + LI + L E+A N +
Sbjct: 390 KSDDFSYAYKLLKKM-EKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSA 448
Query: 538 -RLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
++ K N F + + FG E A + + + + P ++ Y +V N R
Sbjct: 449 GTVLNKVNVV----SFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASR 504
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 155/392 (39%), Gaps = 62/392 (15%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + TY ++ ++ ++ N ++EM ++G E + TY + + K + +
Sbjct: 518 TGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSV 577
Query: 320 AVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVAN 362
A +LFE M+ P+V + C + R + PD+ + F++ N
Sbjct: 578 ANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKN 637
Query: 363 K---------YESLGNSLSKS-----------------------VYDGIHRALTKLGRFD 390
Y +L + L K+ VYD + K + D
Sbjct: 638 NVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLD 697
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA+++ M G+ P+ TYS +I L K R + VL +M EN C P+I +T +I
Sbjct: 698 EAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMI 757
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + D A M EK + +I+GF +V+ +L EM K
Sbjct: 758 DGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSK-GC 816
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
P T+ LI L+EA LL MK+ +P + + I + EF+
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY-----KREFIL 871
Query: 571 ALSVKE-------YPSSAAYLQVFESFFNEGR 595
+L + E P+ Y + ++F GR
Sbjct: 872 SLGLLEEVEKNGSAPTILLYKVLIDNFVKAGR 903
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 127/571 (22%), Positives = 230/571 (40%), Gaps = 84/571 (14%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKK 179
+K+ F P++ +Y+ M+ L ++ L RM+ C +TY +L G L K +
Sbjct: 300 EKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQ- 358
Query: 180 ASDLAALNQFHDGMVKEIAMDN--VAKTLVDVVLGSD---WDDKIGKKLEDMKIELSDNF 234
L + M+ E + + +LV SD + K+ KK+E K E +
Sbjct: 359 ---LGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKME--KCECKPGY 413
Query: 235 VL----------------------------------TVLKELRI--YPVKALGFFRWVGE 258
V+ TVL ++ + + GF ++
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKA 473
Query: 259 H--------SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ +G+ +T TY+ ++ L V + + + +EMK G D+ TY +
Sbjct: 474 YKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI-----SSINNPDLGLV-----FRV 360
F K +++ A + M+ +P+V + L+ + S+ N L+ F
Sbjct: 534 FSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPN 593
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGR------FDEAEKMMKAMKNAGFEPDNITYSQV 414
Y +L + KS I +A R + + K N +P+ +TY +
Sbjct: 594 VITYTALIDGYCKS--GNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGAL 651
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLCKA + +DA ++L+ M +GC P+ + LI G C A ++D A F KM+E+ Y
Sbjct: 652 VDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGY 711
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ + LI+ KR++ K+L +M+E P + +I+ L + +EA
Sbjct: 712 NPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLEN-SCAPNIVIYTEMIDGLSKVAKTDEAY 770
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
L+ +M+++ P + I F G V+ E + + K P+ Y +
Sbjct: 771 KLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHC 830
Query: 591 FNEGRHYEAKDLLYKC-----PHHIRQDSKI 616
G EA LL + P H+ K+
Sbjct: 831 CATGHLDEAYALLEEMKQTYWPKHVSSYCKV 861
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 154/436 (35%), Gaps = 96/436 (22%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT----------------- 303
GYK +TYN +++V R + + V EM + G MD T
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295
Query: 304 ---------------YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
Y K+ + E+A+ M P+VQ +LL
Sbjct: 296 LSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILL--CGC 353
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+N LG R+ + + G S ++++ + A K F A K++K M+ +P
Sbjct: 354 LNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGY 413
Query: 409 ITYSQVIFGLCKA-----------------------------------------GRFEDA 427
+ Y+ +I +C G+FE A
Sbjct: 414 VVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKA 473
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V+ EM NG +PD T++ +I C A+ V+ A F +M D +LI+
Sbjct: 474 YKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDC 533
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F + A+ L EM+ P T+ TLI L A+++ A L LM + P
Sbjct: 534 FSKAGIIKQAHNWLDEMVRD-GCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592
Query: 548 FPEPFVQYISKF---GTVEDASEFLKAL-----------------SVKEYPSSAAYLQVF 587
+ I + G +E A + + +V E P+ Y +
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPNVVTYGALV 652
Query: 588 ESFFNEGRHYEAKDLL 603
+ + +A+DLL
Sbjct: 653 DGLCKAHKVKDARDLL 668
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 42/197 (21%), Positives = 78/197 (39%), Gaps = 6/197 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N +TY ++ + V + EM +G + TY + +
Sbjct: 777 EEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCATGHL 836
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L E M + V ++ LGL+ V E G++ + +Y
Sbjct: 837 DEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEV----EKNGSAPTILLYK 892
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFE--PDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ K GR + A ++ K + +A Y+ +I+ A + + A + +M
Sbjct: 893 VLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHAFELFYDMI 952
Query: 436 ENGCIPDIKTWTILIQG 452
+G IPD+ T+ L+ G
Sbjct: 953 RDGVIPDLGTFVHLLMG 969
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/542 (23%), Positives = 224/542 (41%), Gaps = 100/542 (18%)
Query: 72 LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV 131
LI + WS ELE+ L LSP ++ + VLR + + P KA FFNW + F S
Sbjct: 4 LINSKPWSTELESSLFSLSPSISKTTFFQVLRFIAS-PPKAFEFFNWA-SRNGFAHDSRS 61
Query: 132 YSLMLRNLVNKDSL---KQFWVTLRRMKEDHCYIEE-------ETY---------LSILG 172
Y +ML L +L + F ++ R IE+ +Y + +
Sbjct: 62 YFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFS 121
Query: 173 VLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD 232
++K + + + N ++K N+A ++ D + G+ D
Sbjct: 122 LMKSSGVSPSVITFNSLLLILLKR-GRTNMAHSVFDEMCGTYG-------------VTPD 167
Query: 233 NFVLTVLKELRIYPVKAL--GFFRWVGEHSGY--KHNTITYNGILRVLARHESVRDFWNV 288
+ +L +R + ++ FR+ E S + + + +TYN ++ L R VR NV
Sbjct: 168 TYTFNIL--IRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNV 225
Query: 289 VEEMKKEGYEM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
V+ M K+ ++ D+ TY + R + + +++A+ +FE M+ KP+ + L++ +
Sbjct: 226 VKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGL 285
Query: 347 SSINNPDLGLVFRVANKYESLGNSLS-------KSVYDGIHRALTKLGRFDEAEKMMKAM 399
+ D E LG ++ Y+ + A G FDEA KM K M
Sbjct: 286 CEVQKFD--------KIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKM 337
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE-------MEENGCIP----------- 441
K +PD+ TYS +I LC+ G FE A + D+ + ++GC P
Sbjct: 338 KELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDF 397
Query: 442 -----------------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
D ++ LI GHC + M+ ++Y D
Sbjct: 398 LCKNGKTHKAERVFRQLMKKGTQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDF 457
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +LINGFL + AYK L M++ L P + F +++ +LL E+ + +
Sbjct: 458 ETYVLLINGFLQKGEPILAYKTLERMLKSSYL-PKTSVFHSILSELLKNDFARESASFVV 516
Query: 539 LM 540
LM
Sbjct: 517 LM 518
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 187/430 (43%), Gaps = 25/430 (5%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ L + +S VL+ + P KA FF W +G+ H++ +Y +L
Sbjct: 10 WSTELESSLFSLSPSISKTTFFQVLRFI-ASPPKAFEFFNW-ASRNGFAHDSRSYFMMLD 67
Query: 275 VLARHESV---RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+L R+ ++ R+F +E +++ + R + + +A+KLF M
Sbjct: 68 ILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSG 127
Query: 332 YKPSVQDCSLLLRSISSINNPDLG-LVF-RVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
PSV + LL + ++ VF + Y G + ++ + R K
Sbjct: 128 VSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTY---GVTPDTYTFNILIRGFCKNSMV 184
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWT 447
DE + K M EPD +TY+ ++ GLC+AG+ A NV+ M + PD+ T+T
Sbjct: 185 DEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYT 244
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
L++G+C E+D AL+ F +M+ + + + LI G ++ + ++L +
Sbjct: 245 TLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGG 304
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVED 564
P T+ TL+ A +EA+ + + MK+ P + ++ + + G E
Sbjct: 305 RGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFER 364
Query: 565 ASEFLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--S 614
A + LS ++ P AAY +F+ G+ ++A+ + + QD S
Sbjct: 365 AEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQDPPS 424
Query: 615 KISLLFGSAK 624
+L+ G K
Sbjct: 425 YKTLIIGHCK 434
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 106/501 (21%), Positives = 204/501 (40%), Gaps = 66/501 (13%)
Query: 89 LSPK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
+SP +T S++ +L K A + F+ +C P + +++++R + +
Sbjct: 128 VSPSVITFNSLLLILLK-RGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDE 186
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
+ + M +C + TY +++ L +A K IA NV K +V
Sbjct: 187 GFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKV---------------RIA-HNVVKGMV 230
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK-----ALGFFRWVGEHSGY 262
KK++D+ + V+T +R Y +K AL F + G
Sbjct: 231 -------------KKMKDLSPD-----VVTYTTLVRGYCMKQEIDEALVVFEEMVSR-GL 271
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVE----EMKKEGYEMDIDTYIKISRQFQKFRMME 318
K N ITYN +++ L V+ F + E + G+ D TY + +
Sbjct: 272 KPNDITYNTLIKGLC---EVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFD 328
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL----------G 368
+A+K+F+ M + +P S+L+R++ + + R ++ L G
Sbjct: 329 EALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFE-----RAEQLFDKLSDEDILLRDDG 383
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ + Y+ I L K G+ +AE++ + + G + D +Y +I G CK G FE
Sbjct: 384 CTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTFEAGY 442
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L M +PD +T+ +LI G E A +M++ +Y + +++
Sbjct: 443 KLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSEL 502
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
L + +V MI++ ++R + L G+ +A ++ L+ Y
Sbjct: 503 LKNDFARESASFVVLMIDR-KIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGYMVD 561
Query: 549 PEPFVQYISKFGTVEDASEFL 569
E + +I + G + DA + L
Sbjct: 562 MEELIGFICQNGKLLDAQKML 582
>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
Length = 924
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 156/339 (46%), Gaps = 13/339 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +TYN ++ L R ++ + + +EM+ G D TY I K +
Sbjct: 272 TGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQ 331
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M P+V S L+ N D F++ + + G +K YD +
Sbjct: 332 AKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADE--AFKIVKEMSAAGVQPNKITYDNL 389
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R L KLGR A +++K M G+ D +TY+ VI G + E+A +L+EM + G
Sbjct: 390 IRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGI 449
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T++I+I G C E +RA +M+ +A + LI+G+ + G++
Sbjct: 450 SPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCRE----GSFS 505
Query: 500 LLVEMIEKV---RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
L E ++K+ L P + +LI L +++EA+ M ++ + P + I
Sbjct: 506 LACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLI 565
Query: 557 SKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFF 591
+ G +E A + L + L+ P+ Y Q+ E +F
Sbjct: 566 HGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYF 604
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 143/342 (41%), Gaps = 23/342 (6%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
NG+L+ L R +++ W V M+ G D+ TY + + K R +E A K+ E M +
Sbjct: 212 NGLLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRE 271
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGL--------VFRVANKYESLGNSLSKSVYDGIHR 381
CSL ++ + N GL F + E G Y I
Sbjct: 272 -------TGCSL---NVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIIN 321
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K GR D+A+ ++ M AG P+ + YS +I G + G ++A ++ EM G P
Sbjct: 322 GLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQP 381
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T+ LI+G C + RA +M + Y AD +++I G L Q A+ LL
Sbjct: 382 NKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLL 441
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
EM K + P T+ +I L E A LL M P + IS +
Sbjct: 442 NEM-RKGGISPNVYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCR 500
Query: 560 -GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
G+ A E LK ++ + P Y + N G+ EA
Sbjct: 501 EGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 117/245 (47%), Gaps = 10/245 (4%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+DTY K R + D ++ M D PS++ C+ LL+ + + DL +++V
Sbjct: 180 VDTYKKTGR-------VRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDL--LWKV 230
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
E G S Y + A K+ + A+K+++ M+ G + +TY+ +I GLC+
Sbjct: 231 RGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCR 290
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
AG E+A EME+ G +PD T+ +I G C D+A +M + +
Sbjct: 291 AGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVV 350
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
LI+GF+ Q + A+K++ EM ++P + T+ LI L R+ A +L+ M
Sbjct: 351 YSTLIDGFMRQGNADEAFKIVKEM-SAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQM 409
Query: 541 KKQNY 545
K Y
Sbjct: 410 TKIGY 414
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 147/347 (42%), Gaps = 15/347 (4%)
Query: 253 FRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
F+ V E S G + N ITY+ ++R L + + ++++M K GY D TY +
Sbjct: 368 FKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADTMTYNLVIEG 427
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL--- 367
+ E+A L M G P+V S+++ + I + R + E +
Sbjct: 428 HLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESE-----RASGLLEQMIAD 482
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + VY + + G F A + +K M PD Y+ +I GL G+ ++A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
DEM E G P+ T+ LI G+ A +++A +M+ + + + ++ G
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + L M+EK L P + +I L + ++ A+++L +++K P
Sbjct: 603 YFKSDNLEKVSSTLKSMLEK-GLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVP 661
Query: 548 FPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+ IS F +E A L ++ K P + Y + + F
Sbjct: 662 DSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGF 708
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 147/375 (39%), Gaps = 37/375 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N Y ++ R S +++M +E D+ Y + M++A
Sbjct: 483 GLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGKMDEA 542
Query: 321 VKLFEFMMDGPYKPS-------VQDCS----------LLLRSISSINNPDLGLVFRVANK 363
++ ++ M++ ++P+ + S LL + ++S NP+ + ++
Sbjct: 543 IEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEG 602
Query: 364 Y----------ESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
Y +L + L K + Y + L+ G A ++ ++ G PD
Sbjct: 603 YFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPD 662
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++ Y +I G CKA E A +LDEM + G P I + LI G C ++++ A F
Sbjct: 663 SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFN 722
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
++ K + LI+G+ + A L EM+ + + P + L +
Sbjct: 723 SIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTE-GVAPDAFVYSVLAAGCSNS 781
Query: 528 RRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYL 584
L++A+ + M + Y V K G +++ +FL + K+ PS
Sbjct: 782 GDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVE 841
Query: 585 QVFESFFNEGRHYEA 599
+ G+ EA
Sbjct: 842 NIVIGLGEAGKLSEA 856
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 96/246 (39%), Gaps = 25/246 (10%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+G + + G + YN ++ + + + N+ + +G + TY +
Sbjct: 681 KAVGLLDEMAK-KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTL 739
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K + DA+ L+ M+ P S+L S N+ DL + + +
Sbjct: 740 IDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAAGCS--NSGDLQQALFITEEMIAR 797
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G ++ S +H K G+ E K + M + P +T ++ GL +AG+ +A
Sbjct: 798 GYAIISSFNTLVH-GFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEA 856
Query: 428 CNVLDEMEE--------------------NGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ E+++ G +P + +IQ HC +D+AL+
Sbjct: 857 HTIFVELQQKNASHRDTDHLSSLFTDMINQGLVP-LDVIHNMIQSHCKQGYLDKALMLHD 915
Query: 468 KMMEKN 473
++ K
Sbjct: 916 ALVAKG 921
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 108/289 (37%), Gaps = 48/289 (16%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+SG N Y IL + +++ + ++ M ++G D Y + M+
Sbjct: 586 NSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQ 645
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISS--INNPDL----GLVFRVANKYESLGNSLS 372
AV + + P SL+ S+ S D+ GL+ +A K G S
Sbjct: 646 AAVSVLSVIEKNGLVPD----SLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCY 701
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
++ DG K A + ++ G P+ +TY+ +I G CKAG DA ++ +
Sbjct: 702 NALIDG----FCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYN 757
Query: 433 EMEENGCIPD----------------------------------IKTWTILIQGHCAANE 458
EM G PD I ++ L+ G C +
Sbjct: 758 EMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGFCKRGK 817
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ + MM+K+ ++ ++ G +++ A+ + VE+ +K
Sbjct: 818 LQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQK 866
Score = 46.2 bits (108), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 5/223 (2%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR + +++ MK+ G P + ++ L +A + V ME G PD+
Sbjct: 185 KTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAGISPDVY 244
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ LI+ +C +++ A +M E + + LI G + A+ EM
Sbjct: 245 TYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAFGYKKEM 304
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
E L P T+ +I L R ++A LL M P + I F G
Sbjct: 305 -EDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGFMRQGN 363
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
++A + +K +S P+ Y + GR A +L
Sbjct: 364 ADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRIL 406
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 97/238 (40%), Gaps = 4/238 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G +++ Y ++ + + +++EM K+G E I Y + F K +
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDI 714
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A +F ++ P+ + L+ D+ + N+ + G + VY
Sbjct: 715 SHARNIFNSIICKGLPPNCVTYTTLIDGYCKAG--DIRDAIDLYNEMLTEGVAPDAFVYS 772
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + G +A + + M G+ + +++ ++ G CK G+ ++ L M +
Sbjct: 773 VLAAGCSNSGDLQQALFITEEMIARGYAIIS-SFNTLVHGFCKRGKLQETVKFLHVMMDK 831
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD-ADADLLDVLINGFLSQKRV 494
+P + T ++ G A ++ A F ++ +KN D D L L ++Q V
Sbjct: 832 DIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLV 889
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 130/563 (23%), Positives = 236/563 (41%), Gaps = 86/563 (15%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPS--STVYSLM 135
W D LE++ E K+ V + + +D E FF+W + F S +S +
Sbjct: 45 WQDPLESRFAE--SKVVVSDVAHFVIDRVHDAELGLKFFDWA-STRPFSCSLDGVAHSSL 101
Query: 136 LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH----- 190
L+ L + + + L MK H E + ++ +L A+ S AL FH
Sbjct: 102 LKLLASYRVFPEIELVLENMKAQHLKPTREAFSAL--ILAYAESGSLDRALQLFHTVREM 159
Query: 191 --------------DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
+G+VK +D VA L D +L +D D G + DN+
Sbjct: 160 HNCFPTFVASNLLLNGLVKSGKVD-VALQLYDKMLQTD--DGTG--------AVVDNYTT 208
Query: 237 TVL-KEL----RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+++ K L +I + L RW + + YN I+ + ++ + E
Sbjct: 209 SIMVKGLCNLGKIEEGRRLIKHRW---GKCCVPHVVFYNMIIDGYCKKGDLQCATRALNE 265
Query: 292 MKKEGYEMDIDTYIKISRQFQKF---------------RMMEDAVKLFEFMMDGPYKPS- 335
+K +G ++TY + F K R + VK+F ++D YK
Sbjct: 266 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGL 325
Query: 336 VQDCSLLLRSISSIN-NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
V + + +LR ++ + PD+ + Y+ + K GR +EA++
Sbjct: 326 VTEAAEMLRRMAEMGCGPDI-------------------TTYNIMINFSCKGGRIEEADE 366
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ K G P+ +Y+ ++ CK G + A +L + E G D+ ++ I G
Sbjct: 367 LLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVV 426
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
A E+D AL+ KMMEK DA + ++L++G + R+ LL EM+++ ++P
Sbjct: 427 VAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDR-NVQPDV 485
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKA 571
F TLI+ + L+EA+ + +++ ++ P + ++ KFG + DA L
Sbjct: 486 YVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNE 545
Query: 572 L-SVKEYPSSAAYLQVFESFFNE 593
+ SV P Y V + + +
Sbjct: 546 MNSVHHAPDEYTYSTVIDGYVKQ 568
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G DEA K+ K + G +P + Y+ +I G CK G+ DA + L+EM PD T+
Sbjct: 499 GELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTY 558
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ +I G+ +++ AL F +MM+ + + LINGF + + A K+ M +
Sbjct: 559 STVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM-K 617
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L P T+ TL+ A + E A ++ LM P
Sbjct: 618 SFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLP 658
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 89/202 (44%), Gaps = 4/202 (1%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y+ + L K GR + ++ M + +PD ++ +I G + G ++A + +
Sbjct: 452 IYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVI 511
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G P I + +I+G C ++ AL C +M ++ D +I+G++ Q +
Sbjct: 512 IRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDM 571
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A K+ +M+ K + +P T+ +LI + A + MK + P V
Sbjct: 572 SSALKMFGQMM-KHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVP---NVVT 627
Query: 555 YISKFGTVEDASEFLKALSVKE 576
Y + G A + +A S+ E
Sbjct: 628 YTTLVGGFFKAGKPERATSIFE 649
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 10/281 (3%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-I 305
VKA G + E G K + ++Y + + + V E+M ++G D Y I
Sbjct: 397 VKASGMLFRIAE-IGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNI 455
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+S +K R+ + L E M+D +P V + L+ I N +L ++
Sbjct: 456 LMSGLCKKGRIPAMKLLLSE-MLDRNVQPDVYVFATLIDGF--IRNGELDEAIKIFKVII 512
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G Y+ + + K G+ +A + M + PD TYS VI G K
Sbjct: 513 RKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMS 572
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DV 483
A + +M ++ P++ T+T LI G C ++ RA F+ M K++D +++
Sbjct: 573 SALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGM--KSFDLVPNVVTYTT 630
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
L+ GF + A + M+ L P ATF LI L
Sbjct: 631 LVGGFFKAGKPERATSIFELMLMNGCL-PNDATFHYLINGL 670
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 78/195 (40%), Gaps = 13/195 (6%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F + +H +K N ITY ++ + + V MK ++ TY +
Sbjct: 574 ALKMFGQMMKHK-FKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLV 632
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDL-----------GL 356
F K E A +FE M+ P+ L+ ++ + +P L L
Sbjct: 633 GGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSL 692
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+ G + Y+ + L K G D A+ ++ M GF D++ ++ ++
Sbjct: 693 ILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLH 752
Query: 417 GLCKAGRFEDACNVL 431
GLC G+ ++ N++
Sbjct: 753 GLCHKGKSKEWRNII 767
>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 712
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 121/508 (23%), Positives = 215/508 (42%), Gaps = 72/508 (14%)
Query: 88 ELSPK-LTHESVVYVLRKLDNDPEKASA--FFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
E++P LTHE V+ V+ L + + FFNWV +FR +Y + +N D+
Sbjct: 94 EINPNSLTHEQVITVVASLAQEAGSVVSLSFFNWVIGFSKFRHFMRLYIVCATTFLNNDN 153
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
L R + C + S +G K K+A ++ Q H ++K ++ V
Sbjct: 154 LD------RATEVMQCMVRS---FSEIG---KLKEAVNMVIEMQNHGLVLKARILNFV-- 199
Query: 205 TLVDVVLGSDWDDKIGKKLEDM----KIELSDNFVLTVLKELRI---------------- 244
+DV L + D K ++M + S ++ L V+ R+
Sbjct: 200 --IDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIER 257
Query: 245 -YPV-------------------KALGFFR-WVGEHSGYKHNTITYNGILRVLARHESVR 283
Y V +A +F+ WV G N I ++ ++ L + S++
Sbjct: 258 GYAVDNATCTLMISTFSEKGFVNRAFWYFKKWV--QMGLNPNLINFSSLINGLCKIGSIK 315
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLL 342
+ ++EEM ++G++ ++ T+ + K E A +LF + + YKP+V + +
Sbjct: 316 QAFEMLEEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCM 375
Query: 343 LRSISS---INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+ +N ++ L+ + + G + + Y + K G F A ++M M
Sbjct: 376 INGYCKEEKLNRAEMLLI-----RMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLM 430
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
GF P+ TY+ +I GLCK GRF +A +L ++G D T+TILI C +
Sbjct: 431 GKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDN 490
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+AL F++M + D +VLI F QK+V + KL E + + L P + T+ +
Sbjct: 491 KQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAV-GLGLLPTKETYTS 549
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I + A+ M+ P
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKP 577
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 11/229 (4%)
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
LG D AEK+ M + PD+ +Y ++ G C+ GR D L +M E G D T
Sbjct: 206 LGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNAT 265
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
T++I V+RA F K ++ + + LING + A+++L EM+
Sbjct: 266 CTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMV 325
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKFGTVE- 563
K +P T LI+ L E+A L L+L++ NY P + I+ + E
Sbjct: 326 RK-GWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEK 384
Query: 564 -DASEFLKALSVKE---YPSSAAYLQVFESFF---NEGRHYEAKDLLYK 605
+ +E L + +KE P++ Y + + N GR YE DL+ K
Sbjct: 385 LNRAEML-LIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGK 432
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 75/368 (20%), Positives = 142/368 (38%), Gaps = 37/368 (10%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA F + ++P+ Y+ M+ ++ L + + L RMKE TY
Sbjct: 350 EKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTC 409
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ KA + + D M KE N+
Sbjct: 410 LI---DGHCKAGNFGRAYELMDLMGKEGFTPNI--------------------------- 439
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ N ++ L + +P +A R G SG + +TY ++ R + +
Sbjct: 440 FTYNAIIDGLCKKGRFP-EAYKLLRR-GLKSGLHADKVTYTILISEFCRQTDNKQALAIF 497
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
M K G + D+ TY + F + + +E++ KLFE + P+ + + ++
Sbjct: 498 SRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMI--CGYC 555
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+ + + +K G Y + L + DEA ++ + M + G P +
Sbjct: 556 RDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEV 615
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T + + CK G A +L+ +E+ I + T LI+ C+ +V A L F K+
Sbjct: 616 TRVTLAYEYCKQGDSATAMIILERLEKKLWIRTVNT---LIRKLCSEKKVGVAALFFHKL 672
Query: 470 MEKNYDAD 477
++K+ + D
Sbjct: 673 LDKDLNVD 680
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 115/503 (22%), Positives = 210/503 (41%), Gaps = 78/503 (15%)
Query: 91 PK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
PK ++HES + ++++ + DP++A FN V +++ F ++ Y+ +L L +
Sbjct: 55 PKFISHESAINLIKR-ETDPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAID 113
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDV 209
L +M + C E +L+++ K + + +V+E T +++
Sbjct: 114 AVLHQMTYETCKFHEGIFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNL 173
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
++ S+ +++L+ F+L K L + P NT +
Sbjct: 174 LVESN------------QVDLTRKFLLNSKKSLNLEP------------------NTCIF 203
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
N +++ ++ + + VVEEMKK ++ TY + +++A++LFE M+
Sbjct: 204 NILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMV 263
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+K + L ++L+ Y+ + +
Sbjct: 264 ---------------------------------SKDQILPDALT---YNALINGFCHGEK 287
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
D A K+M+ MK G P+ YS ++ G CK GR E+A V DEM+ G PD +T
Sbjct: 288 VDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTT 347
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEK 507
LI C A VD A+ M E AD +V++ G + R A +L + E
Sbjct: 348 LINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEG 407
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF---PEPFVQYISKFGTVED 564
V L +A+++ ++ L L++A L+ LM + P + ++ + G V D
Sbjct: 408 VYLN--KASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGD 465
Query: 565 ASEFLKA---LSVKEYPSSAAYL 584
A L L K P+S A L
Sbjct: 466 AVMALLGLLELGFKPEPNSWALL 488
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 22/396 (5%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHE---SVRDFWNVVEEMKKEGYEMDIDTY 304
KAL FF W E GY H +Y +L +L R+ + R+F +E+ + +++ +
Sbjct: 94 KALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK- 363
+ R F + + ++++K+F M PSV + LL + + + +V ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTIL--LKRGRTNMAKKVYDEM 210
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G + ++ + R G D+ ++ + G EPD +TY+ ++ GLC+AG+
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 424 FEDACNVLDEMEENGC--IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
A NV+ M + P++ T+T LI+G+CA E+++AL F +M+ + A+
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ LI G ++ +L P TF TL+ A L++A+ + M
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 542 KQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY--------PSSAAYLQVFESF 590
+ P + V+ + + G E A + L L ++ P AAY +F+
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYL 450
Query: 591 FNEGRHYEAKDLLYKCPHHIRQD--SKISLLFGSAK 624
G+ +A+ + QD S +L+ G K
Sbjct: 451 CETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCK 486
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 232/541 (42%), Gaps = 88/541 (16%)
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
E+I + WS +LE+ L LSP L+ +V+ L L D KA FFNW + +
Sbjct: 55 EMINSKPWSSDLESSLASLSPSLSQTTVLQTLGFL-RDTSKALQFFNWAQEMGYTHTEQS 113
Query: 131 VYSLM--LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKA---KKASDLAA 185
+S++ L + ++ + F ++ + +E + S++ +A +++ +
Sbjct: 114 YFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFT 173
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE----LSDNFVLTVLKE 241
+ + H G+ + N +L+ ++L + + KK+ D + D F +L
Sbjct: 174 IMKSH-GVSPSVVTFN---SLLTILLKRGRTN-MAKKVYDEMLSTYGVTPDTFTFNIL-- 226
Query: 242 LRIYPVKAL--GFFRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+R + + + FR + S G + + +TYN ++ L R V +NVV+ M K+
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286
Query: 298 EM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
++ ++ TY + R + R +E A+ +FE M++ K + + L++ +
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCE------- 339
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALT-----------KLGRFDEAEKMMKAMKNAGF 404
A K+E + + L + DG T G D+A K+ + M
Sbjct: 340 -----ARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-------NGCIP---------------- 441
+PD+ TYS ++ LC+ G +E A ++LD++ E +GC P
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETG 454
Query: 442 ------------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
D ++ LI GHC + M+ K++ D + +
Sbjct: 455 KTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYES 514
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LING L + A + L +M+ RP +TF +++ KLL R E+ +L++LM +
Sbjct: 515 LINGLLHMDKPLLALQSLEKMLRSSH-RPNSSTFHSILAKLLEQGRASESASLIQLMLDK 573
Query: 544 N 544
N
Sbjct: 574 N 574
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 155/387 (40%), Gaps = 57/387 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD--IDTYIKISRQFQKFRMME 318
G + + +TYN ++ L R V +NVV+ M K+ +++ + TY + R + R +E
Sbjct: 250 GCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIE 309
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ +FE M++ K + + L++ + A K+E + + L + DG
Sbjct: 310 KALAVFEEMVNQGLKANNITYNTLIKGLCE------------ARKFEKIKDILEGTAGDG 357
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
F PD T++ ++ C AG +DA V + M E
Sbjct: 358 T------------------------FSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELK 393
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF-------LSQ 491
PD T++ L++ C ++A K++E+ D L+ +
Sbjct: 394 IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A K +++ + P ++KTLI E LL LM ++++ P E
Sbjct: 454 GKTKKAEKAFRQLMRRGTQDP--PSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFET 511
Query: 552 FVQYISKFGTVEDA----SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL-YKC 606
+ I+ ++ K L P+S+ + + +GR E+ L+
Sbjct: 512 YESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLML 571
Query: 607 PHHIRQDSKIS-----LLFGSAKSNKV 628
+IRQ+ S LLFG+ ++K
Sbjct: 572 DKNIRQNLSFSTGCVRLLFGAGMNDKA 598
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ + ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEENLECGYPASLYFFNILMHGF--VKEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EMI K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMIMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ KP + L+ + DL F + L Y +
Sbjct: 296 QDLIDEMIMKGLKPDKITYTTLIDG--NCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYK 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 176/396 (44%), Gaps = 22/396 (5%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHE---SVRDFWNVVEEMKKEGYEMDIDTY 304
KAL FF W E GY H +Y +L +L R+ + R+F +E+ + +++ +
Sbjct: 94 KALQFFNWAQEM-GYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFF 152
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK- 363
+ R F + + ++++K+F M PSV + LL + + + +V ++
Sbjct: 153 NSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTIL--LKRGRTNMAKKVYDEM 210
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G + ++ + R G D+ ++ + G EPD +TY+ ++ GLC+AG+
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270
Query: 424 FEDACNVLDEMEENGC--IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
A NV+ M + P++ T+T LI+G+CA E+++AL F +M+ + A+
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ LI G ++ +L P TF TL+ A L++A+ + M
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390
Query: 542 KQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY--------PSSAAYLQVFESF 590
+ P + V+ + + G E A + L L ++ P AAY +F+
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYL 450
Query: 591 FNEGRHYEAKDLLYKCPHHIRQD--SKISLLFGSAK 624
G+ +A+ + QD S +L+ G K
Sbjct: 451 CETGKTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCK 486
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 232/541 (42%), Gaps = 88/541 (16%)
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
E+I + WS +LE+ L LSP L+ +V+ L L D KA FFNW + +
Sbjct: 55 EMINSKPWSSDLESSLASLSPSLSQTTVLQTLGFL-RDTSKALQFFNWAQEMGYTHTEQS 113
Query: 131 VYSLM--LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKA---KKASDLAA 185
+S++ L + ++ + F ++ + +E + S++ +A +++ +
Sbjct: 114 YFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFT 173
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE----LSDNFVLTVLKE 241
+ + H G+ + N +L+ ++L + + KK+ D + D F +L
Sbjct: 174 IMKSH-GVSPSVVTFN---SLLTILLKRGRTN-MAKKVYDEMLSTYGVTPDTFTFNIL-- 226
Query: 242 LRIYPVKAL--GFFRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+R + + + FR + S G + + +TYN ++ L R V +NVV+ M K+
Sbjct: 227 IRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSV 286
Query: 298 EM--DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
++ ++ TY + R + R +E A+ +FE M++ K + + L++ +
Sbjct: 287 DLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCE------- 339
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALT-----------KLGRFDEAEKMMKAMKNAGF 404
A K+E + + L + DG T G D+A K+ + M
Sbjct: 340 -----ARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKI 394
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-------NGCIP---------------- 441
+PD+ TYS ++ LC+ G +E A ++LD++ E +GC P
Sbjct: 395 QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETG 454
Query: 442 ------------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
D ++ LI GHC + M+ K++ D + +
Sbjct: 455 KTKKAEKAFRQLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYES 514
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LING L + A + L +M+ RP +TF +++ KLL R E+ +L++LM +
Sbjct: 515 LINGLLHMDKPLLALQSLEKMLRSSH-RPNSSTFHSILAKLLEQGRTSESASLIQLMLDK 573
Query: 544 N 544
N
Sbjct: 574 N 574
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 173/401 (43%), Gaps = 33/401 (8%)
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
D+ N DG+ + K V +VV G +GKK ++L+ N V+T
Sbjct: 254 DVVTYNTLVDGLCR------AGKVTVAYNVVKG------MGKK----SVDLNPN-VVTYT 296
Query: 240 KELRIYPVK-----ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+R Y K AL F + + G K N ITYN +++ L +++E
Sbjct: 297 TLIRGYCAKREIEKALAVFEEM-VNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAG 355
Query: 295 EG-YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+G + D T+ + ++DA+K+FE M + +P S L+RS+ + +
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415
Query: 354 LG--LVFRVANKYESLGNSLSK---SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
L+ ++ + L K + Y+ I + L + G+ +AEK + + G + D
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQ-DP 474
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+Y +I G CK G FE +L M +PD +T+ LI G ++ AL K
Sbjct: 475 PSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEK 534
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ ++ ++ ++ L Q R + + L+ M++K +R + + L GA
Sbjct: 535 MLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDK-NIRQNLSFSTGCVRLLFGAG 593
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL 569
++A L+ L+ + Y E ++Y+ V S+ L
Sbjct: 594 MNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLL 634
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 158/327 (48%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++ + LS + V+ VL+ + A FF G+ G+ H++ TYN ++ VL R
Sbjct: 57 LDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKRPGFAHDSRTYNFMMCVLGRTRQF 116
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+EEM ++G + ++T+ + F + + + V +F+ M +K V + L
Sbjct: 117 ETMVAKLEEMGEKGL-LTMETFSIAIKAFAEAKQRKKEVGIFDLMKKYGFKVGVDVINFL 175
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+S+ LG + +E L + + S+ Y + +L EA ++ M
Sbjct: 176 LDSLSTAK---LGKEAQAV--FEKLKDRFTPSLQTYTILLSGWCRLKNLLEAGRVWNEMI 230
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ GF PD + ++ ++ GL K + DA + + M+ G P+++++TI+IQ C +
Sbjct: 231 DRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYTIMIQDFCKQKLMG 290
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M+++ DA L LI GF QK+++ Y LL EM E+ P T+ L
Sbjct: 291 EAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRER-GCPPDGRTYNAL 349
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + ++A+ + + M + P
Sbjct: 350 IKLMTSQHMPDDAVRIYKKMIQSGIKP 376
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 97/457 (21%), Positives = 187/457 (40%), Gaps = 34/457 (7%)
Query: 70 LELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK 122
+E+ C DEL E L+E +L+H+ VV VL++ + + A FF +
Sbjct: 34 VEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKR 93
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
F S Y+ M+ L + L M E E ++I + ++ +
Sbjct: 94 PGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLTMETFSIAIKAFAEAKQRKKE 153
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+ + ++K+ V +++ +L S K+GK+ + + +L D F + L
Sbjct: 154 VGIFD-----LMKKYGF-KVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPS----L 203
Query: 243 RIYPVKALGFFRW-----VGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ Y + G+ R G G+ + + +N +L L + + D + E
Sbjct: 204 QTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEI 263
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
MK +G ++ +Y + + F K ++M +A++ F+ M+D +P + L+
Sbjct: 264 MKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKK 323
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
D+ V+ + + G Y+ + + +T D+A ++ K M +G +P TY
Sbjct: 324 MDM--VYSLLKEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTY 381
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ +E + DEM GC PD ++ + I G + A +M+E
Sbjct: 382 NMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLE 441
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
K A L + N F S G +L E+ K+
Sbjct: 442 KGMKA----LKLDYNKFASDISKTGNAVILEELARKM 474
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 215/496 (43%), Gaps = 34/496 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP+ ++ M++ L NK +++ + + + + TY S+ ++ K +
Sbjct: 198 IRPNLFTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSL--IIGHCKNGNLDL 255
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
A F D MVK+ D + T ++ G + ++ + + DM E+ D + + I
Sbjct: 256 AFEMF-DRMVKD-GCDPNSVTYSALINGLCSEGRLEEAM-DMLEEMIDKGIEPTVHAYTI 312
Query: 245 YPVKALG-------FFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
P+ +L + +G+ G N TY ++ L+R V +M +
Sbjct: 313 -PIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLAD 371
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G TY + Q E A+ +FE+M+ P+ + +++++ SI G
Sbjct: 372 GLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSI-----G 426
Query: 356 LVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ + ++ + G S + Y+ I K G + A ++++ MK G + D TY+
Sbjct: 427 YIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYA 486
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I G + G+ E A ++ +EM E+G P++ T+ +I G+ +VD AL F KM+E
Sbjct: 487 NLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES 546
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ +++I+GF R++ A +M+ K L P T+ + I+ L R
Sbjct: 547 GNVPSSGTYNMMISGFSKTNRISEAENFCGKMV-KQGLLPNVITYTSFIDGLCKNGRTSL 605
Query: 533 AMNLLRLMKKQNYPPFP-----EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVF 587
A + MKK++Y FP + + + G EDA L P+ Y +
Sbjct: 606 AFKIFHEMKKRDY--FPNLCTYSSLIDGLCQEGQAEDAERLLDDGC---EPNVDTYTTLV 660
Query: 588 ESFFNEGRHYEAKDLL 603
+GR YEA L+
Sbjct: 661 RGLCGKGRCYEADQLV 676
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 131/290 (45%), Gaps = 11/290 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N ITYN I+ + + + + ++E MK G ++D TY + F + +E
Sbjct: 441 AGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEH 500
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYD 377
A LF M++ P+V + ++ ++ D L L +++ GN S Y+
Sbjct: 501 AFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVES----GNVPSSGTYN 556
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +K R EAE M G P+ ITY+ I GLCK GR A + EM++
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P++ T++ LI G C + + A ++++ + + D L+ G + R A
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEA 672
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L VE ++K L+P + ++ L+ +E A+ + M + P
Sbjct: 673 DQL-VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQP 721
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 14/282 (4%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F W SG ++ TYN ++ ++ + + N +M K+G ++ TY
Sbjct: 536 ALALF-WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
K A K+F M Y P++ S L+ + + A + G
Sbjct: 595 DGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAE------DAERLLDDG 648
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y + R L GR EA++++++MK G +P Y ++ G CK E A
Sbjct: 649 CEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESAL 708
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ D M G P + + LI C AN +A F M++K++++D + VL++G
Sbjct: 709 KIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGL 768
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
L + G L +E++ + R F+T +++ AR L
Sbjct: 769 LKE----GETDLSLELLHVMESRNCTLNFQT---RVMLAREL 803
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 159/331 (48%), Gaps = 14/331 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + I+L ++ VL R LG FF W + GY H+ ++++L++
Sbjct: 91 LNESGIDLRPGLIVRVLS--RCGDAGNLGYRFFLWATKQPGYCHSYEVCKSMVKILSKMR 148
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+KE E+ + + ++ + R+F M++ AV++ + M ++P
Sbjct: 149 QFGAVWGLIEEMRKENPELIEPELFVVLIRRFASANMVKKAVEVLDEMPKYGFEPDEYVF 208
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V + +E + + ++ + + + G+ EA++++
Sbjct: 209 GCLLDALCKN-----GSVKDASKVFEDMREKIPPNLRYFTSLLYGWCREGKLMEAKEVLV 263
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
MK AG EPD + ++ ++ G AG+ DA ++L++M + G P+ +T+LIQ C
Sbjct: 264 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALCRTE 323
Query: 458 E-VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ +D A+ F +M +AD LI+GF ++ Y +L +M +K + P Q T
Sbjct: 324 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK-GVMPSQVT 382
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ ++ + EE + L+ MK+ P
Sbjct: 383 YMQILVAHEKKEQFEECLELIEKMKQIGCHP 413
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 2/250 (0%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
V+ +MK+ G E DI + + + M DA L M Y+P+ ++L++++
Sbjct: 261 VLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDMRKRGYEPNANCYTVLIQALC 320
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ RV + E G Y + K G D+ ++ M+ G P
Sbjct: 321 RTEK-RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPS 379
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY Q++ K +FE+ ++++M++ GC PD+ + ++I+ C EV A+ +
Sbjct: 380 QVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREVKEAVRLWN 439
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLG 526
+M AD+ ++INGF SQ + A EM+ + + P T K+L+ LL
Sbjct: 440 EMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLR 499
Query: 527 ARRLEEAMNL 536
+LE A ++
Sbjct: 500 DDKLEMAKDV 509
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 7/220 (3%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A +++ M GFEPD + ++ LCK G +DA V ++M E P+++ +T L+
Sbjct: 188 KAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREK-IPPNLRYFTSLL 246
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C ++ A +M E + D + L++G+ ++ AY LL +M K
Sbjct: 247 YGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLLNDM-RKRGY 305
Query: 511 RPWQATFKTLIEKLLGA-RRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDAS 566
P + LI+ L +R++EAM + M++ + IS K+G ++
Sbjct: 306 EPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 365
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
L + K PS Y+Q+ + + + E +L+ K
Sbjct: 366 SVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEK 405
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 6/218 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + + +TY ++ + + ++V+++M+K+G TY++I +K
Sbjct: 337 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQF 396
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+ ++L E M P + ++++R + N ++ R+ N+ E+ G S ++
Sbjct: 397 EECLELIEKMKQIGCHPDLLIYNVVIR--LACNFREVKEAVRLWNEMEANGLSPGADMFV 454
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGF--EPDNITYSQVIFGLCKAGRFEDACNVLDEM- 434
+ T G EA K M + G P T ++ L + + E A +V +
Sbjct: 455 IMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLEMAKDVWSCIS 514
Query: 435 -EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ + C ++ WTI I A V A MME
Sbjct: 515 NKTSSCELNVSAWTIWIHALFAKGHVKEACSYCLDMME 552
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 251 GFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
GF +W GY + +TY IL + E + ++E+MK+ G
Sbjct: 354 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHP 413
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ Y + R FR +++AV+L+ M P +++ +S G +
Sbjct: 414 DLLIYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTS-----QGYLIE 468
Query: 360 VANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNAGFEPDNITY 411
+ ++ + + S Y + L L R D+ E M K + K + E + +
Sbjct: 469 ACSHFKEMVSRGIFSAPQYGTLKSLLNTLLRDDKLE-MAKDVWSCISNKTSSCELNVSAW 527
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ I L G ++AC+ +M E +P T+ L++G
Sbjct: 528 TIWIHALFAKGHVKEACSYCLDMMEMDLMPQPNTYVKLMKG 568
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 148/314 (47%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++H+ T++ ++ L R ++ MK+E + D ++ I R + + D
Sbjct: 44 NGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV++F M + +PS Q + + +I N L L R +G S + + +
Sbjct: 104 AVRVFRKMKEYECEPS-QKSYITVFAILVGEN-QLKLALRFYRYMREMGIPPSVASLNVL 161
Query: 380 HRALTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL K G D A ++ + M N G PD+ TY +I GLC+ G+ +A + EME
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKELFKEMETKA 221
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+T LI G C + ++D A+ +M K + L++G + A
Sbjct: 222 CSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRAL 281
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+LL M+ + L P T+ TL+ L +L+EA+ +L MK Q P + + IS
Sbjct: 282 ELLDMMVSRRHL-PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 559 FGTV---EDASEFL 569
F + +A+ FL
Sbjct: 341 FCDICKFHEAANFL 354
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 208/461 (45%), Gaps = 31/461 (6%)
Query: 99 VYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK 156
V L K + D +KA F+ + FR S +SLM+ LV+ + + L RMK
Sbjct: 18 VAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMK 77
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDV--VLGSD 214
E+ C I E+ +LSI + K D A+ F +KE + K+ + V +L +
Sbjct: 78 EEKCNITEDIFLSICRAYGRVHKPLD--AVRVFRK--MKEYECEPSQKSYITVFAILVGE 133
Query: 215 WDDKIG----KKLEDMKIE---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
K+ + + +M I S N ++ L + AL FR + + G ++
Sbjct: 134 NQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREM-PNRGCPPDSY 192
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L R + + + +EM+ + + TY + + + ++ A++L E M
Sbjct: 193 TYGTLINGLCRLGKIGEAKELFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEM 252
Query: 328 MDGPYKPSVQDCSLLL--RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
KP+V S L+ S ++ L L+ + ++ L N ++ Y + L K
Sbjct: 253 ASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSR-RHLPNMIT---YSTLVHGLCK 308
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G+ EA +++ MK G PD Y ++I G C +F +A N LDEM G P+ T
Sbjct: 309 EGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLT 368
Query: 446 WT-------ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
W+ I++QG C + +RA + M + DA D L+N F ++ ++ A
Sbjct: 369 WSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L+ EM+ + P + T+ ++ R++ E+ L+++
Sbjct: 428 HLVDEMVLDGCI-PDEVTWNAVVCAFWDRRKVRESAELVQV 467
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 129/282 (45%), Gaps = 3/282 (1%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
ITYN ++ L + + +EM +G DI TY + K + A F
Sbjct: 390 VITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFN 449
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M+ KP + R + + D + F + + + G Y+ AL +
Sbjct: 450 EMLSKGLKP--DRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQ 507
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G F+EA +++ M + G PD++TY+ +I G K G A V +EM G P + T
Sbjct: 508 QGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVT 567
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T+LI H A +D A + F+KM+EK+ A+ + +ING +R++ AYK EM
Sbjct: 568 YTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEME 627
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EK L P + ++ LI + EEA+ L R M + P
Sbjct: 628 EKGIL-PNKFSYTILINESCNMGYWEEALRLYREMLDRKIQP 668
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 170/405 (41%), Gaps = 46/405 (11%)
Query: 213 SDW-DDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
++W D+ G + D + + VL +RI P AL FFRWV +K + +
Sbjct: 71 NNWVSDQFGAVITD------PHLFIRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCA 124
Query: 272 ILRVLARHESVRDFWNVVE--------------------------EMKKEGYEMDIDTYI 305
IL +L ++ + + V+E +M + G D+
Sbjct: 125 ILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCN 184
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+I R + ++ A ++ M KP+V + +L S D L + ++ +
Sbjct: 185 RILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQAL--ELLSEMQ 242
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L+K G ++A+ +++ M N+G TY+ +I G C+ G F
Sbjct: 243 ERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFV 302
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++++EM P + T+ L+ G C +V L F+ M++ + D + L+
Sbjct: 303 EAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFNSLL 362
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
G+ ++ A+ L E+ K R L P T+ TLI L L+ A+ L + M Q
Sbjct: 363 YGYCRTGCISEAFLLFDEL--KCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQG 420
Query: 545 YPPFPEPFVQYI-----SKFGTVEDASEFL-KALSVKEYPSSAAY 583
FP+ F I K G V A F + LS P AY
Sbjct: 421 L--FPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 120/496 (24%), Positives = 200/496 (40%), Gaps = 27/496 (5%)
Query: 99 VYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL-KQFWVTLRRMK- 156
+ VL + P A FF WV + F+ S V+ +L LV D + +WV R +
Sbjct: 89 IRVLHSMRIRPRVALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSF 148
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN-VAKTLVDVVLGSDW 215
E H ++ VL L +G++ ++ N + + L D L S
Sbjct: 149 EMH---------GVVDVLIAGHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKA 199
Query: 216 DDKIGKKLEDMKIE---LSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
+ G +E I+ ++ N +L + KE R+ +AL + E Y N +TYN
Sbjct: 200 KNVYGM-MEQFGIKPTVVTYNTMLDSYCKEGRV--DQALELLSEMQERGCYP-NDVTYNV 255
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
++ L++ + ++EEM G + TY + F + + +A L E M++
Sbjct: 256 LVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
P++ + L+ + G+ R ++ +S S ++ + + G E
Sbjct: 316 AFPTLSTYNTLMYGLCKWVQVT-GVRLRFSDMLKSKFTPDIVS-FNSLLYGYCRTGCISE 373
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + +K P ITY+ +I GLC G + A + EM + G PDI T+TIL+
Sbjct: 374 AFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVN 433
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G V A F +M+ K D + I G + + A+ + EM+
Sbjct: 434 GCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQEEML-AAGFP 492
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE- 567
P T+ + L EEA +LL M P + I+ F G + A E
Sbjct: 493 PDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREV 552
Query: 568 FLKALSVKEYPSSAAY 583
F + LS PS Y
Sbjct: 553 FNEMLSKGVAPSVVTY 568
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + ITYN + L + + + +++E M +G D TY I F K +
Sbjct: 489 AGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNGHLRK 548
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M+ PSV ++L+ + ++ DL ++ L KSV
Sbjct: 549 AREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMY--------FSKMLEKSV---- 596
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDN-ITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
P N ITY+ +I GLC R ++A DEMEE G
Sbjct: 597 --------------------------PANVITYNAIINGLCMTRRMDEAYKYFDEMEEKG 630
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+P+ ++TILI C + AL + +M+++ D+
Sbjct: 631 ILPNKFSYTILINESCNMGYWEEALRLYREMLDRKIQPDS 670
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 186/399 (46%), Gaps = 24/399 (6%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+K+ P + VY+ +++ L + + V R M+ HC TY ++ L K+ +
Sbjct: 60 EKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARI 118
Query: 181 SDLAALNQFHDGMVKEIAMDNVA--KTLVD--VVLGSDWDDKIGKKLEDMKIELS---DN 233
SD + + + M++ NV TL++ LG + D+ + L + +E S D
Sbjct: 119 SDASLI---LEDMIEAGCAPNVVTYNTLINGFCKLG-NMDEAV--VLFNQMLENSCSPDV 172
Query: 234 FVLTVL-----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
F +L K+ R P + + ++ G + N ITYN ++ L + D +N+
Sbjct: 173 FTYNILIDGYCKQER--PQDGAKLLQEMVKY-GCEPNFITYNTLMDSLVKSGKYIDAFNL 229
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+ M + + T+ + F K ++ A +LF+ M D P + ++++
Sbjct: 230 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACR 289
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N D ++ + G Y+ I L K + DEA ++ + ++N G+ D
Sbjct: 290 ANRIDDAR--QLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDV 347
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+T S +I GLCK+ R +DA +L EME NG PD+ +TILI G C A+++D++L F++
Sbjct: 348 VTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSE 407
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M++K ++I+ RV LL M+E+
Sbjct: 408 MLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 144/303 (47%), Gaps = 13/303 (4%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL +R + H + ITY ++ L + + D ++E+M + G ++ TY +
Sbjct: 87 ALVHYRDMQRHCA--PSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLI 144
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESL 367
F K M++AV LF M++ P V ++L+ P G + + KY
Sbjct: 145 NGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCE 204
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N ++ Y+ + +L K G++ +A + + M +P + T++ +I CK G+ + A
Sbjct: 205 PNFIT---YNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 261
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ M + GC+PDI T+ I+I G C AN +D A +M E D + +++G
Sbjct: 262 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 321
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+V+ AY E+ E +R + T TLI+ L +RRL++A LLR M++
Sbjct: 322 LCKASQVDEAY----EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377
Query: 545 YPP 547
P
Sbjct: 378 SAP 380
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 154/327 (47%), Gaps = 15/327 (4%)
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F + + ++A LF+ + G P S L+ D +R+ ++ E G
Sbjct: 8 FVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKAR--DFQQAYRLLDEMEKRGIV 65
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+VY+ I + L GR D A + M+ P ITY+ ++ LCK+ R DA +
Sbjct: 66 PHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDASLI 124
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L++M E GC P++ T+ LI G C +D A++ F +M+E + D ++LI+G+
Sbjct: 125 LEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCK 184
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
Q+R KLL EM+ K P T+ TL++ L+ + + +A NL ++M +++ P
Sbjct: 185 QERPQDGAKLLQEMV-KYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHF 243
Query: 551 PF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK- 605
F + K G ++ A E + ++ + P Y + R +A+ LL +
Sbjct: 244 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 303
Query: 606 ----CPHHIRQDSKISLLFGSAKSNKV 628
CP + + S++ G K+++V
Sbjct: 304 TEAGCPPDVVTYN--SIVSGLCKASQV 328
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 2/178 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ R + D ++E M + G D+ TY I K +++A
Sbjct: 272 GCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEA 331
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+++E + +G Y V CS L+ + D ++ + E G++ Y +
Sbjct: 332 YEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDA--EKLLREMERNGSAPDVVAYTILI 389
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
K + D++ M + G P ITYS VI LCK+ R D C +L M E G
Sbjct: 390 HGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62914, mitochondrial; Flags: Precursor
gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats. EST gb|AA728420 comes from this gene
[Arabidopsis thaliana]
gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 528
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 7/343 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T N +L + D +V++M + GY+ D T+ + +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P + ++ + + DL L + NK E+ + +Y +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL--NLLNKMEAAKIEANVVIYSTVI 260
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + M+N G P+ ITYS +I LC GR+ DA +L +M E
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++ LI ++ +A + +M++++ D + LINGF R+ A ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L MI K L P T+ TLI A+R+++ M L R M ++ + I F
Sbjct: 381 LELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 561 TVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
D F + +SV +P+ Y + + G+ +A
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ LF M PS+ + S LL +I+ +N DL + F K E LG S + Y
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF--GEKMEILGISHNLYTY 116
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + R A ++ M G+EPD +T + ++ G C R DA ++D+M E
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + +
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M E ++ + T+I+ L R ++A+NL M+ + P + I
Sbjct: 237 ALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 557 S---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS L + K P+ + + ++F +G+ +A+ L
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + EEM K + +I TY + F + +A ++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L+ D G+ +FR ++ +GN+++ Y +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT---YTTLIHGF 438
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ A V + ++ + PDI
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 444 KTWTILIQGHCAANE 458
T+ I+I+G C A +
Sbjct: 499 YTYNIMIEGMCKAGK 513
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVK--ALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
K+E KIE + TV+ L Y + AL F + E+ G + N ITY+ ++ L +
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNY 301
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
D ++ +M + ++ T+ + F K + A KL+E M+ P++
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 340 SLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
S L+ ++ + + + + + L N ++ Y+ + K R D+ ++ +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT---YNTLINGFCKAKRVDKGMELFRE 418
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G + +TY+ +I G +A ++A V +M G P+I T+ IL+ G C +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLING 487
+ +A++ F + + D +++I G
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EMI K L P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMK-GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ L+V P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANX 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 69/179 (38%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M N G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASSVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM +N +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ LSV P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 109/246 (44%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA +
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANE 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F+ + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFKYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g13630-like [Vitis
vinifera]
Length = 829
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 155/347 (44%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +YN +L L S+ + +M+ G E DI TY ++ F+ ++ A
Sbjct: 300 GLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGA 359
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K+ + M+ P + ++L+ + N + F++ K S G LS Y +
Sbjct: 360 WKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES--FKLKEKMLSQGLKLSIVTYTVLL 417
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K GR DEA ++ M+ G +PD +TYS +I GLCK G E+A + +EM
Sbjct: 418 SSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIY 477
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ + +I G + A + F + + + + L +++I+G+ + A +
Sbjct: 478 PNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRS 537
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
++IEK + P TF +LI +L EA+ LL +K P + ++ +
Sbjct: 538 YKQIIEK-GISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYC 596
Query: 560 --GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G + + L + K P+ Y V + EGR +E+ LL
Sbjct: 597 EEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 643
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 144/355 (40%), Gaps = 40/355 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + ++ + +R E V D V+ +MK ++ I TY + + +M D
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEI 226
Query: 325 E------------FMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ ++DG + S +QD LR E+ G
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLR--------------------ETGGEEF 266
Query: 372 SKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
SV ++ + K+G D A+ M G PD +Y+ ++ GLC AG E+A
Sbjct: 267 GPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALE 326
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ME +G PDI T+ IL G + A +M+ + D +LI G
Sbjct: 327 FTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHC 386
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP-- 547
+ ++KL +M+ + L+ T+ L+ L + R++EA+ LL M+ P
Sbjct: 387 QMGNIEESFKLKEKMLSQ-GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL 445
Query: 548 -FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK 600
+ + K G VE+A E + + K YP+S + F +G EA+
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQ 500
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 147/354 (41%), Gaps = 47/354 (13%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +TY ++ + ++ + + + E+M +G ++ I TY + K +++
Sbjct: 369 NGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDE 428
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG----------- 368
AV L M KP + S+L+ + G V YE +
Sbjct: 429 AVILLHEMEVIGLKPDLLTYSVLIHGLCK-----RGAVEEAIELYEEMCSKRIYPNSFVC 483
Query: 369 --------------------NSLSKS-------VYDGIHRALTKLGRFDEAEKMMKAMKN 401
+S++KS +Y+ + KLG EA + K +
Sbjct: 484 SAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIE 543
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G P +T++ +I+G CK G+ +A +LD ++ +G +P T+T L+ G+C ++
Sbjct: 544 KGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHS 603
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
+M K V++ G + R++ + +LL M + L P Q T+ T+I
Sbjct: 604 MFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYAR-GLFPDQITYNTVI 662
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
+ A L++A L M + + P P + + + +G ++DA L L
Sbjct: 663 QSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLKDADRLLVTL 716
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 143/353 (40%), Gaps = 69/353 (19%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + +TY +L L + + + ++ EM+ G + D+ TY + K +E+A
Sbjct: 405 GLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEA 464
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSI-------------SSINNPDLG---LVFRVA-NK 363
++L+E M P+ CS ++ + S+ D+ +++ + +
Sbjct: 465 IELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDG 524
Query: 364 YESLGN--------------SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGF--- 404
Y LGN +S ++ ++ + K G+ EA K++ +K G
Sbjct: 525 YAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPT 584
Query: 405 --------------------------------EPDNITYSQVIFGLCKAGRFEDACNVLD 432
+P ITY+ V+ GLCK GR ++ +L
Sbjct: 585 SVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLK 644
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M G PD T+ +IQ C A+++ +A +M++ + +VLING
Sbjct: 645 YMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYG 704
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ A +LLV + ++ +R + + T+I+ ++ A+ M ++ +
Sbjct: 705 NLKDADRLLVTLQDQ-SIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 756
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/252 (19%), Positives = 104/252 (41%), Gaps = 3/252 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G ++TY ++ + ++++ EM+ + + TY + + K + ++
Sbjct: 580 GLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHES 639
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V+L ++M P + +++S + DL F++ N+ S Y+ +
Sbjct: 640 VQLLKYMYARGLFPDQITYNTVIQSFCKAH--DLQKAFQLHNQMLQHSLQPSPVTYNVLI 697
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L G +A++++ +++ + Y+ +I C G ++A +M E G
Sbjct: 698 NGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFE 757
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
I+ ++ +I C N + A F M+ D D+ V++N F N +++
Sbjct: 758 VSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEI 817
Query: 501 LVEMIEKVRLRP 512
MI K L P
Sbjct: 818 FAMMI-KCGLLP 828
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/396 (23%), Positives = 174/396 (43%), Gaps = 31/396 (7%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYK------------HNTITYNGILRVLARHESVR 283
L ++ ++ Y G F+W G G++ N +T+N +++ + +
Sbjct: 166 LKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKIN 225
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + V +M + G D TY + F K + +A ++ + M KP + + +L
Sbjct: 226 EASDAVVKMVESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTML 285
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
++ P+ + + K G L + Y + K + D+A K+ + MK G
Sbjct: 286 HTLCMEKKPEEA--YELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRG 343
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P ++Y+ +I GLC +G+ + A + L+E+ E G +PD + I+I G+C VD+A
Sbjct: 344 IVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAF 403
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
KM+ ++ D ++L+ G + A+KL I K T+ T+I
Sbjct: 404 QFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVD-VVTYNTMISY 462
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALS-----VK 575
L RL+EA +L+ M+ + + P + V+ ++ G E+A +F+ LS VK
Sbjct: 463 LCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVK 522
Query: 576 EYPSSA--------AYLQVFESFFNEGRHYEAKDLL 603
+ +S Y Q +G++ EA L
Sbjct: 523 THDTSQELDASSDIMYSQQISDLCTQGKYKEAMKLF 558
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 158/381 (41%), Gaps = 49/381 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN +++ L + + V +EM+ D+ TY + K+R + +L E M
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198
Query: 328 MD-GPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
G +P+ +++++ IN +V V + G S Y+ +
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVES-----GVSPDCFTYNTMINGF 253
Query: 384 TKLGRFDEAEKMMKAMKNAGFEP-----------------------------------DN 408
K G+ EA +MM M G +P D
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY +I G K + + A + +EM++ G +P + ++ LI+G C + + D+A+ +
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
++EK D +++I+G+ + V+ A++ +M+ +P T L+ L
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGN-SFKPDIFTRNILLRGLCRVD 432
Query: 529 RLEEAMNLLR-LMKKQNYPPFP--EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYL 584
LE+A L + KQN + Y+ K G +++A + + + VK++ P Y
Sbjct: 433 MLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYN 492
Query: 585 QVFESFFNEGRHYEAKDLLYK 605
+ + + GR EA+ + K
Sbjct: 493 AIVRALTHAGRTEEAEKFMSK 513
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 150/339 (44%), Gaps = 8/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T T+N ++ L+ + + ++ E+ +G D+ T+ + K
Sbjct: 367 GCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLG 426
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++LFE M P ++L+ + S+ LG + N+ ES G S Y+ I
Sbjct: 427 IRLFEEMKSSGCTPDEVTYNILIDHLCSMGK--LGNALDLLNEMESNGCPRSTVTYNTII 484
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K R +EAE++ M G +T++ +I GLCKA R +DA ++++M + G
Sbjct: 485 DALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQ 544
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+ ++ +C + +A M ++ D LING R A KL
Sbjct: 545 PNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKL 604
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYI 556
L M K +RP + +I+ L L +A+NL R M + PP + F
Sbjct: 605 LRGMRIK-GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLC 663
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
G +++A +FL + K + P +++ + E N G
Sbjct: 664 RGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 117/535 (21%), Positives = 210/535 (39%), Gaps = 69/535 (12%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEET 166
+DPE A N ++ F PSS VY +++ L + +R M+ + +
Sbjct: 67 SDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVV 126
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
S + A L +F D VD+VL +D G + + +
Sbjct: 127 VRSFV---------ESYARLRRFDDA--------------VDLVLNQLDNDTFGVQADTV 163
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
N +L VL E + + G G + + +T N +++ L R VR
Sbjct: 164 VF----NHLLNVLVEGSKLKLLESVYNEMTGR--GIQPDVVTLNTLIKALCRAHQVRTAV 217
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
++EEM G D T+ + + F + +E A+++ MM+ P+ ++L+
Sbjct: 218 LMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGY 277
Query: 347 SSINNPDLGLVF---RVANKYE------------------------------SLGNSLSK 373
+ + L + +A+ +E G+
Sbjct: 278 CKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDV 337
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ + L+K G DEA+ ++ M + G PD T++ +I L R E+A ++ E
Sbjct: 338 FTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARE 397
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G PD+ T+ ILI C + + F +M D ++LI+ S +
Sbjct: 398 LTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGK 457
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
+ A LL EM E T+ T+I+ L R+EEA + M Q F
Sbjct: 458 LGNALDLLNEM-ESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFN 516
Query: 553 --VQYISKFGTVEDASEFLKALSVKE--YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K ++DA+E ++ + VKE P++ Y + + +G +A D+L
Sbjct: 517 TLIDGLCKAKRIDDATELIEQM-VKEGLQPNNITYNSILTHYCKQGNIKKAADIL 570
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 99/257 (38%), Gaps = 38/257 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+N ++ L + + + D ++E+M KEG + + TY I + K ++ A
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKA 566
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ E M AN +E + Y +
Sbjct: 567 ADILETM--------------------------------TANGFE-----IDVVTYGTLI 589
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR A K+++ M+ G P Y+ VI L + DA N+ EM E G
Sbjct: 590 NGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEP 649
Query: 441 PDIKTWTILIQGHC-AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ I+ + C + A +M+ K + + +L G L+ +
Sbjct: 650 PDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLIS 709
Query: 500 LLVEMIEKVRLRPWQAT 516
+ +IEK + R A+
Sbjct: 710 AIELIIEKAKFRESDAS 726
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 146/392 (37%), Gaps = 83/392 (21%)
Query: 72 LILACDWSDELENKLEELSPKLTHESV---VYVLRKLDN------DPEKASAFFNWVCDK 122
LI+A + LE L+ L+ +LT + + VY L N DP F +
Sbjct: 378 LIVALSSQNRLEEALD-LARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KS 435
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
P Y++++ +L + L L M+ + C TY +I+ L K + +
Sbjct: 436 SGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEE 495
Query: 183 LAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
A F + I+ V TL+D + + D + +E M +KE
Sbjct: 496 --AEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQM------------VKE 541
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
G + N ITYN IL + +++ +++E M G+E+D+
Sbjct: 542 -------------------GLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDV 582
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + K + A+KL M +P+ NP + +FR
Sbjct: 583 VTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPT-----------PKAYNPVIQSLFRRN 631
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
N ++L + + M G PD +TY V LC+
Sbjct: 632 NLRDAL--------------------------NLFREMTEVGEPPDALTYKIVFRSLCRG 665
Query: 422 GR-FEDACNVLDEMEENGCIPDIKTWTILIQG 452
G ++A + L EM G +P+ ++ +L +G
Sbjct: 666 GGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEG 697
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 37 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 96
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ D+ + V N
Sbjct: 97 LEHMMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KEGDIRVAQSVFNAITKW 154
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 214
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC + VD A+ + +M+ ++ D + LI G
Sbjct: 215 NELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ LE A + M ++N
Sbjct: 275 LCKKGDLKQAHDLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 333
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LS P + Y + F +G + LL
Sbjct: 334 DDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLL 393
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 215 NELFDEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAMEIYK-----QMLSQSLSPDLITYN 269
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 270 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE 329
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 330 NIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTG 389
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 390 SKLLKEM 396
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT------------------ 305
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 306 --LIDGCCKEG-----------------DLETAFEHRKRMIQENIRLDDVAYTALISGLC 346
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR+ +AEK+++ M +AG +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 347 QEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 406
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 407 TYNVLMNG 414
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 152/345 (44%), Gaps = 7/345 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + ++G++ +RD K+ + + DT K+ K + +
Sbjct: 63 RSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWG 122
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+E ++ Y S+ ++L+ S + ++ L V + G S ++ +
Sbjct: 123 FYEENLECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNG 180
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA + DEM + G +P+
Sbjct: 181 YIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPN 240
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LI GHC VD A+ + +M+ ++ D + LI G + + A L+
Sbjct: 241 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLID 300
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
EMI K L+P + T+ TLI+ LE A + M K+N + IS
Sbjct: 301 EMIMK-GLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 560 GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G DA + L+ LSV P Y + F +G + LL
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD TY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 76/185 (41%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ KP + L+ + DL F + L Y +
Sbjct: 296 QDLIDEMIMKGLKPDKFTYTTLIDG--NCKEGDLETAFEYRKRMIKENIRLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G
Sbjct: 354 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYK 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 161/349 (46%), Gaps = 29/349 (8%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + +EL + VL R LG FF W + Y H+ Y ++++L++
Sbjct: 97 LNESGVELRPGLIERVLN--RCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 154
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+KE ++ + + ++ + ++F M++ A+++ + M ++P
Sbjct: 155 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 214
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
LL ++ G V A +E + ++G+ EA+ ++ M
Sbjct: 215 GCLLDALCK-----HGSVKDAAKLFEDMR---------------MRVGKMMEAKYVLVQM 254
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
AGFEPD + Y+ ++ G AG+ DA ++L +M G P+ +T+LIQ C + +
Sbjct: 255 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 314
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+ A+ F +M +AD L++GF +++ Y +L +MI+K L P + T+
Sbjct: 315 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK-GLMPSELTYMH 373
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA 565
++ EE + L+ M++ Y P ++ K G V++A
Sbjct: 374 IMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 422
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/382 (22%), Positives = 156/382 (40%), Gaps = 54/382 (14%)
Query: 88 ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
EL P L VL + + FF W + ++ S VY M++ L
Sbjct: 103 ELRPGLIER----VLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGA 158
Query: 148 FWVTLRRM-KEDHCYIEEETYLSIL------GVLKKAKKASDLAALNQFH---------- 190
W + M KE+ IE E ++ ++ ++KKA + D F
Sbjct: 159 VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLL 218
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
D + K ++ + AK D+ + ++GK +E +VL + E
Sbjct: 219 DALCKHGSVKDAAKLFEDMRM------RVGKMME-------AKYVLVQMNE--------- 256
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+G++ + + Y +L A + D ++++ +M++ G+E + + Y + +
Sbjct: 257 ---------AGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 307
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
K ME+A+K+F M + V + L+ D + V + G
Sbjct: 308 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI--VLDDMIKKGLM 365
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
S+ Y I A K F+E ++M+ M+ + PD Y+ VI CK G ++A +
Sbjct: 366 PSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRL 425
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
+EMEENG P + T+ I+I G
Sbjct: 426 WNEMEENGLSPGVDTFVIMING 447
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 151/330 (45%), Gaps = 29/330 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + +TYN ++ + + + + +++ M E D+ TY + K +++A
Sbjct: 75 GFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEA 134
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKS--- 374
L ++D + P+V S L+ GL + E+L G+ L +
Sbjct: 135 RML---IVDKGFSPNVITYSTLIS----------GLCRELRGVSEALKLFGSVLKQGYEP 181
Query: 375 ---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L K R +EA ++ + G EPD ITY+ I GLCKAGR EDA +L
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLML 241
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+M+E GC+PD+ + +I G C VD A + + M K +A + LI G
Sbjct: 242 KDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRA 301
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR---RLEEAMNLLRLMKKQNYPP- 547
+ A EM+++ ++P T+ L++ L AR R++EA+ L M ++ P
Sbjct: 302 GKWKKAMTTFKEMLKR-GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPD 360
Query: 548 --FPEPFVQYISKFGTVEDASEFLKALSVK 575
+ + K G ++DA L A+ K
Sbjct: 361 VVTYSALIDGLGKAGKLDDARRLLGAMEAK 390
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 134/288 (46%), Gaps = 42/288 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N ITYN +L L + D + E M K GY D+ TY + F K +++A
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+F+ + + P V Y+ +
Sbjct: 65 LKIFDGAVKRGFVPDV-------------------------------------VTYNALI 87
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K + DEA+++++ M + PD +TY+ ++ GLCK GR ++A ++ + G
Sbjct: 88 NGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLI---VDKGFS 144
Query: 441 PDIKTWTILIQGHC-AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T++ LI G C V AL F ++++ Y+ + ++LI+G L + RVN A++
Sbjct: 145 PNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFE 204
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L ++ K L P T+ I+ L A R+E+A+ +L+ M ++ P
Sbjct: 205 LFSGLV-KHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 251
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 116/268 (43%), Gaps = 36/268 (13%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ Y+ + L GR +A+ + + M AG+ PD +TY+ ++ G CK G ++A +
Sbjct: 9 NRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIF 68
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D + G +PD+ T+ LI G C A+++D A +M+ +N D + L+NG
Sbjct: 69 DGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKN 128
Query: 492 KRVNGAYKLLVE-----------------------MIEKVRL---------RPWQATFKT 519
RV+ A L+V+ + E ++L P T+
Sbjct: 129 GRVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVKE 576
LI+ LL R+ EA L + K P F+ + K G VEDA LK + K
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Query: 577 -YPSSAAYLQVFESFFNEGRHYEAKDLL 603
P ++ V E R EA+ LL
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLL 276
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 167/403 (41%), Gaps = 40/403 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ F P Y+ ++ D L + L+RM ++ + TY
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTY-------------- 118
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
N +G+ K +D +VD K I S + + +E
Sbjct: 119 -----NSLVNGLCKNGRVDEARMLIVD------------KGFSPNVITYS-TLISGLCRE 160
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
LR +AL F V + GY+ TYN ++ L + + V + + + + K G E D
Sbjct: 161 LRGVS-EALKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDA 218
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY K +EDA+ + + M + P V + ++ + D V
Sbjct: 219 ITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL--L 276
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ E+ G S + ++ + + G++ +A K M G +P +TY+ ++ GLCKA
Sbjct: 277 SGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKA 336
Query: 422 ---GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
GR ++A + D M E G +PD+ T++ LI G A ++D A M K +
Sbjct: 337 RQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNV 396
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
+ LI+G ++V+ A +L V M+EK P T+ T+I
Sbjct: 397 YTYNSLISGLCGLEKVDEALELFVAMVEK-GCVPDTITYGTII 438
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 106/238 (44%), Gaps = 12/238 (5%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M+ GF P+ ITY+ ++ GLC GR DA + + M + G PD+ T+ L+ G C E
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D AL F +++ + D + LINGF +++ A ++L M+ + L P T+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE-NLVPDVVTYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-----GTVEDASEFLKALS 573
+L+ L R++EA L+ + + P + IS G E F L
Sbjct: 120 SLVNGLCKNGRVDEAR---MLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-CPHHIRQDSKISLLF--GSAKSNKV 628
P Y + + E R EA +L H + D+ +F G K+ +V
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRV 234
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 159/358 (44%), Gaps = 45/358 (12%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +L L R + ++ EMK+ + ++ T+ + KFR +++A+++FE M
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNG 368
Query: 330 GP-----YKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLS---------- 372
G +P V + L+ + + + LGLV R+ ++ + N+++
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 373 -------KSVYDGIHR---------------ALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ ++D +++ + K GR + A + M+ G + + +T
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I C E A + DEM E GC PD + LI G A ++DRA +KM
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
E + D +VLINGF + +++ AY++L EM E ++P T+ TLI
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEM-ENAGIKPDGVTYNTLISHFSKTGDF 607
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALS--VKEYPSSAAY 583
A L++ M K+ P + I + G +++A + + +S K P++ Y
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIY 665
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 128/288 (44%), Gaps = 2/288 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ + + + ++M K+G ++ T + K + AV+ F
Sbjct: 415 NTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFF 474
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M K + + L+R+ ++NN + + + ++ G S VY + L+
Sbjct: 475 NEMQGKGLKGNAVTYTALIRAFCNVNNIEKAM--ELFDEMLEAGCSPDAIVYYTLISGLS 532
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G+ D A ++ MK AGF PD ++++ +I G C+ + ++A +L EME G PD
Sbjct: 533 QAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGV 592
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI + A KM+++ LI+ + ++ A K+ +M
Sbjct: 593 TYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDM 652
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
++ P + LI L +++ A++L+ MK + P F
Sbjct: 653 SSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTF 700
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 120/300 (40%), Gaps = 39/300 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T N ++ + +H + EM+ +G + + TY + R F +E A
Sbjct: 446 GVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKA 505
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++LF+ M++ P L+ +S D V +K + G S ++ +
Sbjct: 506 MELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASF--VLSKMKEAGFSPDIVSFNVLI 563
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + DEA +M+K M+NAG +PD +TY+ +I K G F A ++ +M + G +
Sbjct: 564 NGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLV 623
Query: 441 PDIKTW------------------------------------TILIQGHCAANEVDRALL 464
P + T+ ILI C N+VD AL
Sbjct: 624 PTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALS 683
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M K + + + + G + ++ A++L+ M E P T + L E L
Sbjct: 684 LMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHA-CNPDYITMEILTEWL 742
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 159/420 (37%), Gaps = 78/420 (18%)
Query: 248 KALGFFRWVGEHSGYKHNTI---TYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDT 303
KAL FF WV +S + + + T + +R + + ++ + K + ++
Sbjct: 102 KALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSHKIPLSVNA 161
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR---- 359
+ R F + +M++++ F++ PS R ++ I N + ++FR
Sbjct: 162 ATLLIRCFGRAQMVDES-----FLVYNELCPS--------RRLTHIRNILIDVLFRKGRV 208
Query: 360 ----------VANKYESLGNSLSKSVYDGIHRALTKLGR-FDEAEKMMKAMKNAGFE--P 406
+ K E NS + + K+GR DE E + K A E P
Sbjct: 209 DDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFP 268
Query: 407 DNITYSQVIFGLCKAGRFEDA------------------CN-----------------VL 431
++I +Q+I LC++GR + A CN +L
Sbjct: 269 NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLL 328
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM--MEKN---YDADADLLDVLIN 486
EM+E P++ T+ ILI C VD AL F KM E N + D + LI+
Sbjct: 329 AEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLID 388
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G R L+ M + R P T+ LI+ A +E A L M K P
Sbjct: 389 GLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVP 448
Query: 547 P---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
P V + K G + A EF + K +A Y + +F N +A +L
Sbjct: 449 PNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMEL 508
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 4/238 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ F + E +G + I Y ++ L++ + V+ +MK+ G+ DI ++ +
Sbjct: 504 KAMELFDEMLE-AGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVL 562
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F + +++A ++ + M + KP + L+ S D R+ K
Sbjct: 563 INGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTG--DFSTAHRLMKKMVKE 620
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGRFED 426
G + Y + A G DEA K+ + M + P+ + Y+ +I LC+ + +
Sbjct: 621 GLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDL 680
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A +++D+M+ G P+ T+ + +G N + +A +M E + D +++L
Sbjct: 681 ALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ +G+ + +++N ++ R + + + +++EM+ G + D TY + F K
Sbjct: 548 KEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDF 607
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFR-VANKYESLGNSLSKSV 375
A +L + M+ P+V L+ + N D + +FR +++ + N++ +
Sbjct: 608 STAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTV---I 664
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + +L + + D A +M MK G +P+ T++ + GL + A ++D M
Sbjct: 665 YNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMT 724
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDR 461
E+ C PD T IL + A E +
Sbjct: 725 EHACNPDYITMEILTEWLSAVGETAK 750
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 152/345 (44%), Gaps = 13/345 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ++YN ++ LA + + + + M G E D+ + + F K +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL + ++P V + ++ + D G V K SL Y +
Sbjct: 62 HKLLNQALK-RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPK-----ASLDVISYTTVI 115
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L R DEA ++ + +K AG P+ + Y+ VI GL KAGR ED +EM + C+
Sbjct: 116 KGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV 175
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P T+T++I G C A + A F +M++K D LI+GF +++ A KL
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKL 235
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYI 556
L M+ K P T+ +++ + EA ++ M+++ P F Y+
Sbjct: 236 LDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYL 294
Query: 557 SKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK 600
SK G E+A + L ++ + P Y + + F+ GR EA+
Sbjct: 295 SK-GRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEAR 338
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 138/315 (43%), Gaps = 5/315 (1%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G +TITY ++ ++ + + +++ M +G E TY I F K M+
Sbjct: 206 QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMIN 265
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A ++ M + +P + + LL S + ++V + + G + +Y
Sbjct: 266 EAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE--AYQVLTEMTARGCAPDVILYTS 323
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L GR EA + +M G PD +TY +I K G E A +L+ M ++G
Sbjct: 324 LIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSG 383
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD + L+ G+ VD+A + +M+ +A +VL++G + + A+
Sbjct: 384 VGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAF 443
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI-- 556
L EM+EK + P ++ LI+ L A R+ EA + M + P + I
Sbjct: 444 SLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYS 503
Query: 557 -SKFGTVEDASEFLK 570
+K G + +A + ++
Sbjct: 504 LAKAGRIPEAKKLVE 518
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 151/384 (39%), Gaps = 43/384 (11%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N + Y ++ L + + D EEM TY + K +M+ D
Sbjct: 137 AGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPD 196
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A K+FE M+ P + L+ S + D ++ + + G + Y I
Sbjct: 197 ACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR--KLLDVMLTKGPEPTAVTYGSI 254
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
KL +EA++++ M+ G EP ++ ++ GR E+A VL EM GC
Sbjct: 255 VHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGC 314
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK--------------------NYDADAD 479
PD+ +T LI + V A F M+EK N +A +
Sbjct: 315 APDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGE 374
Query: 480 LLDV---------------LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+L++ L++G++ +RV+ A+ + M+ ++P TF L+ L
Sbjct: 375 ILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS-GIKPNAVTFNVLMHGL 433
Query: 525 LGARRLEEAMNLLR-LMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPS 579
+ + A +L + +++K+ PP + I G SE F + + P
Sbjct: 434 FKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPE 493
Query: 580 SAAYLQVFESFFNEGRHYEAKDLL 603
Y + S GR EAK L+
Sbjct: 494 CHTYTSLIYSLAKAGRIPEAKKLV 517
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 168/411 (40%), Gaps = 15/411 (3%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ T Y++++ L L +M + C + TY +++ KA K +
Sbjct: 176 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA--- 232
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE---DMKIELSDN--FVLTVLKE 241
+ D M+ + + A T +V G D I + E M+ + F+ T L
Sbjct: 233 RKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 291
Query: 242 LRIYPVKALGFFRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ +A ++ + E + G + I Y ++ +L V + +V + M ++G
Sbjct: 292 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 351
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D TY I + F K +E A ++ E M P + L+ + D F
Sbjct: 352 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ--AFG 409
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGL 418
V ++ + G + ++ + L K G+ D A + K M + P ++Y+ +I GL
Sbjct: 410 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGL 469
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
KAGR +A EM + G IP+ T+T LI A + A M++ + D
Sbjct: 470 GKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 529
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
LI G + V+ A+ + EM+++ P + T+K L A R
Sbjct: 530 QAYSALITGLIDSSMVDTAWDVFQEMMKR-GCAPNEVTYKVLRRGFRAAGR 579
>gi|356529971|ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Glycine max]
Length = 693
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 112/462 (24%), Positives = 205/462 (44%), Gaps = 43/462 (9%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF-- 148
LTH+ V ++ L +D A +FFNW +FR + +Y +L++ + ++
Sbjct: 74 LTHDQAVTIVASLASDAGSMVALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHE 133
Query: 149 --------WVTLRRMKEDHCYIEEETYLSILGVLKKAK------KASDLAALNQFHDGMV 194
+ + R+KE IE + G+ K K L ++ + +
Sbjct: 134 VMQCMVKSFAEIGRVKEA---IEMVIEMHNQGLAPSTKTLNWVVKIVTEMGLVEYAENLF 190
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-----IE---LSDNFVLT-VLKEL--R 243
E+ V V + K+G LE + IE + DN L+ +++E +
Sbjct: 191 DEMCARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEK 250
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +AL +FR E G + N I + ++ L + SV+ + ++EEM G++ ++ T
Sbjct: 251 GFVTRALWYFRRFCE-MGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYT 309
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSIS---SINNPDLGLVFR 359
+ + K E A +LF + + +KP+V + ++ +N ++ L
Sbjct: 310 HTALIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLL--- 366
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + G + + + Y + K G F+ A ++M M GF P+ TY+ ++ GLC
Sbjct: 367 --SRMKEQGLAPNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLC 424
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K GR ++A VL NG D T+TILI HC E+ +AL+ F KM++ D
Sbjct: 425 KKGRVQEAYKVLKSGFRNGLDADKVTYTILISEHCKQAEIKQALVLFNKMVKSGIQPDIH 484
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
LI F +KR+ + ++ E + L P T+ ++I
Sbjct: 485 SYTTLIAVFCREKRMKES-EMFFEEAVRFGLVPTNKTYTSMI 525
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/362 (20%), Positives = 151/362 (41%), Gaps = 27/362 (7%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FF W S ++H T Y L +++ V++ M + ++ +I
Sbjct: 95 ALSFFNWAIASSKFRHFTRLYIACAASLISNKNFEKAHEVMQCM--------VKSFAEIG 146
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R +++A+++ M + PS + + +++ ++ ++GLV N ++ +
Sbjct: 147 R-------VKEAIEMVIEMHNQGLAPSTKTLNWVVKIVT-----EMGLVEYAENLFDEMC 194
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y + KLG E+++ + M GF DN T S ++ C+ G
Sbjct: 195 ARGVQPNCVSYRVMVVGYCKLGNVLESDRWLGGMIERGFVVDNATLSLIVREFCEKGFVT 254
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A E G P++ +T +I+G C V +A +M+ + + + LI
Sbjct: 255 RALWYFRRFCEMGLRPNLINFTCMIEGLCKRGSVKQAFEMLEEMVGRGWKPNVYTHTALI 314
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G + A++L ++++ +P T+ +I ++ A LL MK+Q
Sbjct: 315 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCRDEKMNRAEMLLSRMKEQGL 374
Query: 546 PPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I K G E A E + ++ + + P+ Y + + +GR EA
Sbjct: 375 APNTNTYTTLIDGHCKAGNFERAYELMNVMNEEGFSPNVCTYNAIVDGLCKKGRVQEAYK 434
Query: 602 LL 603
+L
Sbjct: 435 VL 436
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 183/438 (41%), Gaps = 46/438 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++R L K ++ LRRM C ++ TY +I+ K + L
Sbjct: 254 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 313
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
D + K D V T ++ G + + + LE + E
Sbjct: 314 --LKDAVFKGFVPDQV--TYCSLINGLCAEGDVERALE-------------LFNE----- 351
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ G K + + YN +++ L + V+ EM +EG DI TY
Sbjct: 352 ----------AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 401
Query: 307 ISRQFQKFRMMEDA-VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K + DA V + + +M G Y P V + L+ D L ++ +
Sbjct: 402 VINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSAL--QLVERMW 458
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L K G+ +E + + M G P+ ITY+ +I C++ + E
Sbjct: 459 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 518
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V+ +M + G PD ++ LI G C +++ A L F K+ EK Y A AD + LI
Sbjct: 519 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 578
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA-MNLLRLMKKQN 544
F + ++ A K+ EM+ K R T++ LI+ ++ A M+L+ ++KK
Sbjct: 579 GAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG- 636
Query: 545 YPPFPEPFVQYISKFGTV 562
F+ +S FG V
Sbjct: 637 -------FIPSMSTFGRV 647
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++R L + ++ + + M +G D TY I + K M+++A +L
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314
Query: 325 EFMMDGPYKPSVQD----CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ D +K V D CSL+ + D+ + N+ ++ G VY+ +
Sbjct: 315 K---DAVFKGFVPDQVTYCSLINGLCAE---GDVERALELFNEAQAKGIKPDIVVYNSLV 368
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L G A ++M M G PD TY+ VI GLCK G DA V+++ G +
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 428
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G+C ++D AL +M E D + ++NG +VN +
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EMI K P T+ LIE + ++EEA ++ M ++ P F I F
Sbjct: 489 FQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 547
Query: 560 --GTVEDASEFLKALSVKEYPSSA 581
G +E A + L K Y ++A
Sbjct: 548 RNGDLEGAYLLFQKLEEKGYSATA 571
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSVYD 377
DA +LF+ M+ P++ + +L ++ + + GL+ K G S++ Y+
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL---GKVIQRGMSINLFTYN 226
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
R L + GR EA +++ M+ A PD +TY+ +I GLCK ++A + L M
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC+PD T+ +I G+C + V A + K + D LING ++ V A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L E K ++P + +L++ L + A+ ++ M ++ P + + +
Sbjct: 346 LELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 404
Query: 555 YISKFGTVEDASEFLKALSVKEY 577
+ K G + DA+ + +K Y
Sbjct: 405 GLCKMGNISDATVVMNDAIMKGY 427
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 162/403 (40%), Gaps = 42/403 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ D E+A FN K +P VY+ +++ L + + + M E+ C+ + +
Sbjct: 339 EGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 397
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE- 224
TY ++ L K SD + +D ++K L DV + D K+L+
Sbjct: 398 TYNIVINGLCKMGNISDATVV--MNDAIMK--------GYLPDVFTFNTLIDGYCKRLKL 447
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
D ++L + W G +TITYN +L L + V +
Sbjct: 448 DSALQLVERM--------------------W---EYGIAPDTITYNSVLNGLCKAGKVNE 484
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+EM +G + TY + F + ME+A K+ M P + L+
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N DL + + K E G S + ++ + A + AEK+ M + G
Sbjct: 545 GFC--RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 602
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D+ TY +I G CK + A L EM + G IP + T+ +I + V +A+
Sbjct: 603 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 662
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M++ +++D ++N + K+ A K+LVE + K
Sbjct: 663 IIHIMVK--IGVVPEVVDTILN---ADKKEIAAPKILVEDLMK 700
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 113/314 (35%), Gaps = 43/314 (13%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R AR +RD + E M Y I + A K++ M+
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P + ++ LRS P + L R+ G +V G++ G
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIAL--RLLRALPHRGAVAYCTVVCGLYAH----GH 167
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK---------------------------- 420
+A ++ M + P+ +++V+ LCK
Sbjct: 168 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 227
Query: 421 -------AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
AGR +A ++D M +PD+ T+ LI+G C + A+ +MM +
Sbjct: 228 WIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 286
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D + +I+G+ V A +LL + + K P Q T+ +LI L +E A
Sbjct: 287 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERA 345
Query: 534 MNLLRLMKKQNYPP 547
+ L + + P
Sbjct: 346 LELFNEAQAKGIKP 359
>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Brachypodium distachyon]
Length = 676
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 197/509 (38%), Gaps = 82/509 (16%)
Query: 173 VLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD 232
VL+ A + DGMV + A++ +++G D ++ + + +
Sbjct: 155 VLRAGLDTGSFAYARKVFDGMVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQ 214
Query: 233 NFVL---TVLKELRIYPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVR 283
F L T +R++ K G FR V E G N + Y + L + V+
Sbjct: 215 GFCLDNATCTVIVRVFCQK--GRFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVK 272
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCS-- 340
+ V+EEM +G + ++ T+ + K E A +LF + + YKP+V +
Sbjct: 273 QAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVM 332
Query: 341 ---------------LLLRSISSINNPD----------------LGLVFRVANKYESLGN 369
LL R + P+ F + NK G
Sbjct: 333 IGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGF 392
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ Y+ + L K G+ EA K+++ N G + D +TY+ +I CK G A +
Sbjct: 393 QPNIYTYNALIDGLCKKGKIQEAYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALD 452
Query: 430 VLDEMEENGCIPDIKTWTIL-----------------------------------IQGHC 454
+ + M ENGC PDI T+T L I G+C
Sbjct: 453 LFNRMAENGCHPDIHTYTTLIARYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYC 512
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+ AL F +M++ AD+ LI+G + R+ A L M++K RL P +
Sbjct: 513 KVGKSTSALRVFERMVQNGCQADSITYGALISGLCKESRLEEARALYEGMLDK-RLVPCE 571
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL-KALS 573
T TL + + A+++L + K+ V+ +S G VEDAS FL KAL
Sbjct: 572 VTPVTLAFEYCRREKAVVAVSILDRLDKRRKNHTVNVLVRKLSAIGHVEDASLFLKKALD 631
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
V AY S + ++ A ++
Sbjct: 632 VDLAVDRLAYTSFINSCYANKKYALATEI 660
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 4/221 (1%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR +E + ++ M+ GF DN T + ++ C+ GRF D + M E G P++ +
Sbjct: 199 GRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELFRRMLEMGTPPNVVNY 258
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T I G C V +A +M+ K + LING A++L +++I+
Sbjct: 259 TAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKIGWTERAFRLFLKLIK 318
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVE 563
+P T+ +I +L A LL M +Q P + IS K G+
Sbjct: 319 SSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFN 378
Query: 564 DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
A E + + + + P+ Y + + +G+ EA +L
Sbjct: 379 CAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVL 419
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 166/424 (39%), Gaps = 49/424 (11%)
Query: 89 LSPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
L P + TH S++ L K+ E+A F + ++P+ Y++M+ + L +
Sbjct: 286 LKPNVYTHTSLINGLCKI-GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLAR 344
Query: 148 FWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFH-DGMVKEIAMDNVAKT 205
+ L RM E TY +++ G K+ +N+ +G I N
Sbjct: 345 AEMLLGRMVEQGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNA--- 401
Query: 206 LVDVVLGSDWDDKIGKKLEDMKI-ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
L+D + K GK E K+ +++N L + K + + + EH H
Sbjct: 402 LIDGLC------KKGKIQEAYKVLRMANNQGLQLDK---------VTYTVMITEHCKQGH 446
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
ITY D +N M + G DI TY + ++ + R ME++ KLF
Sbjct: 447 --ITY------------ALDLFN---RMAENGCHPDIHTYTTLIARYCQQRQMEESQKLF 489
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + P+ Q + ++ + L RV + G Y + L
Sbjct: 490 DKCLAIELVPTKQTYTSMIAGYCKVGKSTSAL--RVFERMVQNGCQADSITYGALISGLC 547
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K R +EA + + M + P +T + F C+ + A ++LD +++
Sbjct: 548 KESRLEEARALYEGMLDKRLVPCEVTPVTLAFEYCRREKAVVAVSILDRLDKR---RKNH 604
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T +L++ A V+ A L ++K D D + + F++ N Y L E+
Sbjct: 605 TVNVLVRKLSAIGHVEDASL----FLKKALDVDLAVDRLAYTSFINSCYANKKYALATEI 660
Query: 505 IEKV 508
EK+
Sbjct: 661 SEKI 664
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 99/266 (37%), Gaps = 44/266 (16%)
Query: 382 ALTKLGRFDEAEKMMKAMKN------------------------------------AGFE 405
A + GR EA M+ M++ G
Sbjct: 123 AFAEAGRLPEAADMVFEMRSHGLPFCVETANWVLRAGLDTGSFAYARKVFDGMVTRGGLL 182
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD ++ +I G C+ GR E+ +L M+ G D T T++++ C
Sbjct: 183 PDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSEL 242
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F +M+E + I+G + V A+ +L EM+ K L+P T +LI L
Sbjct: 243 FRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAK-GLKPNVYTHTSLINGLC 301
Query: 526 GARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE--YPS 579
E A L L+L+K +Y P + I + G + A E L V++ P+
Sbjct: 302 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARA-EMLLGRMVEQGLAPN 360
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
+ Y + EG A +L+ K
Sbjct: 361 TNTYTTLISGHCKEGSFNCAFELMNK 386
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 13/344 (3%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
ITY ++ + + ++EEM G D+ TY I R K M+E A +L
Sbjct: 207 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 266
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ KP V ++LLR+ + D G ++ + S G +K Y + +L +
Sbjct: 267 SLTSKGCKPDVISYNILLRAFLNQGKWDEG--EKLVAEMFSRGCEPNKVTYSILISSLCR 324
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR DEA ++K M PD +Y +I LCK GR + A ++D M NGC+PDI
Sbjct: 325 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 384
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ++ C ++AL F K+ + + +I+ S + A ++ MI
Sbjct: 385 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 444
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY------ISKF 559
K + P + T+ +LI L +EEA+ LL M++ + P + Y + K
Sbjct: 445 SK-GVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP---TVISYNIVLLGLCKV 500
Query: 560 GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
++DA F + + P+ Y+ + E G EA +L
Sbjct: 501 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 544
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 48/406 (11%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEET 166
N E A+ N + + F P Y++M+ +L N+ L L ++ D+C T
Sbjct: 151 NRIEAATQVLNRM-KARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVIT 209
Query: 167 YLSIL------GVLKKAKKA----------SDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
Y ++ G + +A K D+ N GM KE ++ A+ + +
Sbjct: 210 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 269
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW------VGE--HSGY 262
D I S N +L L +W V E G
Sbjct: 270 SKGCKPDVI-----------SYNILLRAF----------LNQGKWDEGEKLVAEMFSRGC 308
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ N +TY+ ++ L R + + +V++ M ++ D +Y + K ++ A+
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ ++M+ P + + + +L ++ N + L + NK +G + S Y+ + A
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQAL--EIFNKLRGMGCPPNVSSYNTMISA 426
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L G A M+ AM + G +PD ITY+ +I LC+ G E+A +LD+ME++G P
Sbjct: 427 LWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 486
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ ++ I++ G C +D A+ FA+M+EK + +LI G
Sbjct: 487 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 532
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 128/283 (45%), Gaps = 12/283 (4%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--Y 376
+++ E +++ Y P V C+ L++ + N + + + E L + V Y
Sbjct: 86 ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKN-----IEKASRVMEILESHTEPDVFAY 140
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K+ R + A +++ MK GF PD +TY+ +I LC + A VLD++
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+ C+P + T+TILI+ ++ A+ +M+ + D + +I G + V
Sbjct: 201 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 260
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L+ + K +P ++ L+ L + +E L+ M + P + I
Sbjct: 261 AAELITSLTSK-GCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 319
Query: 557 S---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
S +FG +++A LK + KE P + +Y + + EGR
Sbjct: 320 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 17/350 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K N++T++ ++ ++ V + + ++EEM+K G E D+ Y + F +E +
Sbjct: 196 KPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKE 255
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSV--YDGI 379
LF M+ P+V S L+ ++ A +++ G + V Y +
Sbjct: 256 LFNEMLRKNVTPNVVTYSCLMNALCKKQKWK-----EAAQMLDTMTGCKVRPDVVAYTVL 310
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L+K GR +A K++ M G EP+N+TY+ +I GLCK GR +DA +L+ M + G
Sbjct: 311 ADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGK 370
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL--LDVLINGFLSQKRVNGA 497
PD+ T++ L++G C ++D A+ +M K + D+ +++I Q+R+ A
Sbjct: 371 KPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHA 430
Query: 498 YKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
++ M+E R P T+ LI+ L A +L +A+ L + P + I
Sbjct: 431 KRVYYTMVE--RGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488
Query: 557 SKFGTVEDAS----EFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ ++ S F K + P+ + Y + S E +A++L
Sbjct: 489 NGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNL 538
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 115/232 (49%), Gaps = 5/232 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L K R EA+++ K MK +P+++T+S +I G CK G E+ +L+EME
Sbjct: 167 YNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEME 226
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G D+ ++ LI G C+ +++R F +M+ KN + L+N +++
Sbjct: 227 KMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWK 286
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A ++L + + ++RP + L + L R +A+ +L LM K+ P +
Sbjct: 287 EAAQML-DTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAI 345
Query: 553 VQYISKFGTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G V+DA L+ ++ K + P Y + + G+ EA DLL
Sbjct: 346 INGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLL 397
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 130/289 (44%), Gaps = 5/289 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN I+ L + V D ++E M K+G + D+ TY + + +++A
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 321 VKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
V L +M + KP V +L+++ + L RV G + Y+
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCK--QRRLRHAKRVYYTMVERGFPSNIVTYNI 451
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ G+ +A ++ K ++G P+ TY+ +I GLCK A + ++ +G
Sbjct: 452 LIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + + L+ C + V++A F +M N+D D +++I+G L V A
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESA- 570
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K L+ + + L P TF LI + L +L+EA +L M + P
Sbjct: 571 KELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVP 619
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 9/275 (3%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P S L+ S + P F V G L+ ++ + + + G +A
Sbjct: 92 PCFTSLSALIESFVNTQKPSFA--FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAM 149
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ MK PD ++Y+ VI GLCK R +A + EM+ C P+ T++ LI G
Sbjct: 150 DLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGF 209
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V+ +M + + D + LI+GF S+ + +L EM+ K + P
Sbjct: 210 CKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRK-NVTPN 268
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV---QYISKFGTVEDASEFLK 570
T+ L+ L ++ +EA +L M P + +SK G DA + L
Sbjct: 269 VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD 328
Query: 571 ALSVK--EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
L VK E P++ Y + EGR +A +L
Sbjct: 329 -LMVKRGEEPNNVTYNAIINGLCKEGRVDDALGIL 362
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 100/454 (22%), Positives = 183/454 (40%), Gaps = 57/454 (12%)
Query: 86 LEELSPKLTHESVVYVLRKL------DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
LEE+ K+ E V+V L D E+ FN + +K P+ YS ++ L
Sbjct: 222 LEEME-KMGLEGDVFVYSALISGFCSKGDIERGKELFNEML-RKNVTPNVVTYSCLMNAL 279
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL------------- 186
K K+ L M + Y + L K +ASD +
Sbjct: 280 CKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNN 339
Query: 187 ---NQFHDGMVKEIAMDNVAKTL---------VDVVLGSDWDDKI-GKKLEDMKIELSDN 233
N +G+ KE +D+ L DVV S + G D ++L +
Sbjct: 340 VTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLN- 398
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
L + KE I P + +N +++ L + +R V M
Sbjct: 399 --LLMSKEFHIKP------------------DVFAFNLVIQELCKQRRLRHAKRVYYTMV 438
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+ G+ +I TY + + + A++L++ +D P+ ++L+ + +
Sbjct: 439 ERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM-- 496
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L + + NK + G + S Y+ + +L + ++A + + M+NA +PD ++++
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I G KAG E A +L EM +PD T++ILI ++D A + +M+
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ DA L D L+ G+ + + +L +M +K
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADK 650
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/196 (18%), Positives = 85/196 (43%), Gaps = 4/196 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG N TY ++ L + + + + + + G + Y + + +E
Sbjct: 475 SGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQ 534
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLL-RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A LF+ M + + P V ++++ ++ + + + + ++++ S+
Sbjct: 535 ARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSIL-- 592
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I+R L KLG+ DEA + + M + G PD + + ++ G G+ E ++L +M +
Sbjct: 593 INRFL-KLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKD 651
Query: 439 CIPDIKTWTILIQGHC 454
+ D K + ++ C
Sbjct: 652 VVLDSKLTSTILACLC 667
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 153/315 (48%), Gaps = 6/315 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +T T+ ++R + + + ++ ++M EG+ D+ TY + K A
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M+ +P+V + ++ S+ + + F + ++ + G S Y+ +
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCK--DRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M ++ PD ++++ V+ LCK G+ +A +V+D+M + G
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T L+ GHC +E+D A+ F M+ K + + LING+ +R++ A L
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYL 363
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
EM + L P T+ TLI L RL++A+ L M + P + + Y+
Sbjct: 364 FGEMCRQ-ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 422
Query: 558 KFGTVEDASEFLKAL 572
K + +A LKA+
Sbjct: 423 KNRYLAEAMALLKAI 437
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ +L+ S +N +G F V K LG+ + + + R + G+ EA
Sbjct: 94 PNIYTLHILINSFCHLNR--VGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEAL 151
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF PD +TY +I GLCK G A +L M + C P++ + +I
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F++M+ K D + LI+ + LL EM++ ++ P
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPD 270
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+F T+++ L ++ EA +++ M ++ P
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 93/445 (20%), Positives = 179/445 (40%), Gaps = 71/445 (15%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
FRP Y ++ L + L M + +C Y +I+ L K ++ ++
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE-- 219
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + K I+ D +L+ + +W K + + E+ D+
Sbjct: 220 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEW-----KHVATLLNEMVDS--------- 265
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+I P + +++N ++ L + V + +VV++M + G E ++
Sbjct: 266 KIMP------------------DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVV 307
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVA 361
TY + M++AVK+F+ M+ P+V + L+ I D + +F
Sbjct: 308 TYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 367
Query: 362 NKYESLGNSLSKSV--------------------------------YDGIHRALTKLGRF 389
+ E + ++++ S Y + L K
Sbjct: 368 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 427
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
EA ++KA++ + +PD + I G+C+AG E A ++ + G PD+ T++I+
Sbjct: 428 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 487
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I G C +D A F +M E + + + + GFL + A +LL EM+ R
Sbjct: 488 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMV--AR 545
Query: 510 LRPWQATFKTLIEKLLGARRLEEAM 534
A+ TL K+L L++++
Sbjct: 546 GFSADASTMTLFVKMLSDDGLDQSL 570
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 5/211 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + G P+ T +I C R A +VL ++ + G PD T+T LI+G +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ AL F KM+ + + D LING + A +LL M++K +P +
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYN 205
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED----ASEFLKALSV 574
T+I+ L R++ EA NL M + P + I + + A+ + +
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K P ++ V ++ EG+ EA D++ K
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K ++ +M+ G P+I T ILI C N V A
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
AK+++ + D LI G + ++ A L +MI + RP T+ TLI L
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGE-GFRPDVVTYGTLINGLC 177
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
A+ LL M ++N P
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQP 199
>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 634
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 166/368 (45%), Gaps = 27/368 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA F+ + + +G + TY +L + + N +EM+++G ++ TY +
Sbjct: 140 KAFQLFQEM-KRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTAL 198
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISS-I 349
+ K R + A ++FE M+ P++ + C + R + +
Sbjct: 199 IHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKV 258
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+ PD+ + FR+ + N ++ Y + L K + EA +++ M G EP+ I
Sbjct: 259 DIPDVDIYFRIVDSELKEPNVVT---YGALVDGLCKAHKVKEARDLLETMSLEGCEPNQI 315
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y +I G CK G+ ++A V +M +GC P++ T++ LI +D AL KM
Sbjct: 316 IYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM 375
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+E + + + +++G + + AY+L++ M+E+ P T+ +I+ A R
Sbjct: 376 LENSCAPNVVIYTEMVDGLCKVGKTDEAYRLML-MMEEKGCYPNVVTYTAMIDGFGKAGR 434
Query: 530 LEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQ 585
++ + LL+LM + P + + G ++DA + L+ + +P Y +
Sbjct: 435 VDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRK 494
Query: 586 VFESFFNE 593
V E F +E
Sbjct: 495 VIEGFSHE 502
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/431 (25%), Positives = 191/431 (44%), Gaps = 29/431 (6%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA F + + P Y+ +L ++Q M++D C TY +
Sbjct: 139 EKAFQLFQEM-KRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTA 197
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMK 227
++ K +K L+ N+ + M+ + N+ L+D + +K + MK
Sbjct: 198 LIHAYLKTRK---LSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMK 254
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+ D + ++ IY FR V + + N +TY ++ L + V++ +
Sbjct: 255 NDKVD------IPDVDIY-------FRIV-DSELKEPNVVTYGALVDGLCKAHKVKEARD 300
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++E M EG E + Y + F K +++A ++F M+ P+V S L+ +
Sbjct: 301 LLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKL- 359
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ L L +V K L NS + +V Y + L K+G+ DEA ++M M+ G
Sbjct: 360 -FKDKRLDLALKVLTK--MLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY 416
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ +TY+ +I G KAGR + +L M GC P+ T+ +LI CAA +D A
Sbjct: 417 PNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKL 476
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M + + + +I GF S + V + LL E+ E + P +K LI+ +
Sbjct: 477 LEEMKQTYWPKHIGMYRKVIEGF-SHEFV-ASLGLLAELSEDGSV-PILPVYKLLIDNFI 533
Query: 526 GARRLEEAMNL 536
A RLE A+ L
Sbjct: 534 KAGRLEMALEL 544
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 156/365 (42%), Gaps = 33/365 (9%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K N + L + + E +NV+ EM +G+ D TY K+ +E A +
Sbjct: 87 KVNVCNFTRCLCCIGKFEKA---YNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQ 143
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGI 379
LF+ M P V + LL + GL+ + N ++ + G + + Y +
Sbjct: 144 LFQEMKRNGITPDVYTYTTLLDRFCKV-----GLIEQARNWFDEMQQDGCAPNVVTYTAL 198
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K + A ++ + M + G P+ +TY+ +I G CKAG E AC + M+ +
Sbjct: 199 IHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKV 258
Query: 440 -IPDIK----------------TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
IPD+ T+ L+ G C A++V A M + + + + D
Sbjct: 259 DIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYD 318
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LI+GF +++ A ++ +M+ P T+ +LI+KL +RL+ A+ +L M +
Sbjct: 319 ALIDGFCKVGKLDEAQEVFTKMLGH-GCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLE 377
Query: 543 QNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYE 598
+ P V + K G ++A + + K YP+ Y + + F GR
Sbjct: 378 NSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDR 437
Query: 599 AKDLL 603
+LL
Sbjct: 438 CLELL 442
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 145/315 (46%), Gaps = 26/315 (8%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDL---GLVFRVANKYESLGNSLSKSV 375
A KL + M+ Y+P ++L+ I S + P + GL R N+ +G L+K
Sbjct: 30 AYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYNEMLEMGVVLNKVN 89
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
R L +G+F++A +++ M + GF PD+ TYS+VI LC A + E A + EM+
Sbjct: 90 VCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMK 149
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
NG PD+ T+T L+ C +++A F +M + + LI+ +L ++++
Sbjct: 150 RNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLS 209
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK--KQNYP------- 546
A ++ EM+ P T+ LI+ A E+A + MK K + P
Sbjct: 210 RANEIF-EMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFR 268
Query: 547 ----PFPEP-------FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
EP V + K V++A + L+ +S++ P+ Y + + F G
Sbjct: 269 IVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVG 328
Query: 595 RHYEAKDLLYKCPHH 609
+ EA+++ K H
Sbjct: 329 KLDEAQEVFTKMLGH 343
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/272 (21%), Positives = 99/272 (36%), Gaps = 47/272 (17%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA------ 421
G S +++ + A + G + A K++K M G++P + Y+ +I G+C
Sbjct: 6 GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65
Query: 422 -----------------------------------GRFEDACNVLDEMEENGCIPDIKTW 446
G+FE A NV+ EM G IPD T+
Sbjct: 66 EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTY 125
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ +I C A++V++A F +M D L++ F + A EM +
Sbjct: 126 SKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM-Q 184
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVE 563
+ P T+ LI L R+L A + +M P + I K G E
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244
Query: 564 DASEFLKALSVK--EYPSSAAYLQVFESFFNE 593
A + + + P Y ++ +S E
Sbjct: 245 KACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 75/178 (42%), Gaps = 14/178 (7%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P + ++ ++ C++G + A +L +M G P + ILI G C+ +
Sbjct: 2 MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61
Query: 459 VDRALLCFAKMMEKNYDADADLLDVL--------INGFLSQKRVNGAYKLLVEMIEKVRL 510
+ + + E+ Y+ ++ VL + AY ++ EM+ K
Sbjct: 62 LPSMEV--IGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSK-GF 118
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
P +T+ +I L A ++E+A L + MK+ P + + +F G +E A
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQA 176
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 121/528 (22%), Positives = 214/528 (40%), Gaps = 54/528 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK------- 179
P+ Y++++R L + L++ + M+ C TY +++ +A +
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 180 ----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+L N +G+ K M+ K ++V + + +
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMV-----REGLAPDVVSYNTL 122
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
LS + L E +L F + + G + +T+ ++ + ++ +V
Sbjct: 123 LSGYCKVGCLHE-------SLAVFSEMTQR-GLVPDVVTFTSLIHATCKAGNLEQAVALV 174
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M++ G M+ T+ + F K ++DA+ E M +PSV + L+ +
Sbjct: 175 AQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKL 234
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
DL + + E+ Y I K+G D A ++ + M G PD I
Sbjct: 235 GRMDL--ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 292
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TYS +I GLC+ R DAC + + M + G PD T+T LI GHC V++AL +M
Sbjct: 293 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 352
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-----------IEKVRLRPWQATFK 518
+ K D VLING R A++LL ++ + + L +A FK
Sbjct: 353 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 412
Query: 519 TLIEKLLG---ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
+++ L G ++EA + + M +N+ + I + G V A F K +
Sbjct: 413 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 472
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEA----KDLLYKCPHHIRQDSK 615
+ P+S + + + F EG EA +DLL CP + SK
Sbjct: 473 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASK 520
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 143/347 (41%), Gaps = 43/347 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TYN ++R L + + VV +M+ G + TY + F + ++ A
Sbjct: 5 GVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGA 64
Query: 321 VKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++ M + G KP++ + S+ N L K+
Sbjct: 65 ERVVSLMREEGNAKPNLV-------------------------TFNSMVNGLCKA----- 94
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
GR + A K+ M G PD ++Y+ ++ G CK G ++ V EM + G
Sbjct: 95 -------GRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGL 147
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ T+T LI C A +++A+ A+M E+ + LI+GF + ++ A
Sbjct: 148 VPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDAL- 206
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS-- 557
L VE + K ++P + LI R++ A L+R M+ + P + IS
Sbjct: 207 LAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGY 266
Query: 558 -KFGTVEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G ++ A + K L P + Y + E R +A +L
Sbjct: 267 CKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACEL 313
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 183/438 (41%), Gaps = 46/438 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++R L K ++ LRRM C ++ TY +I+ K + L
Sbjct: 253 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 312
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
D + K D V T ++ G + + + LE + E
Sbjct: 313 --LKDAVFKGFVPDQV--TYCSLINGLCAEGDVERALE-------------LFNE----- 350
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ G K + + YN +++ L + V+ EM +EG DI TY
Sbjct: 351 ----------AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 400
Query: 307 ISRQFQKFRMMEDA-VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K + DA V + + +M G Y P V + L+ D L ++ +
Sbjct: 401 VINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSAL--QLVERMW 457
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L K G+ +E + + M G P+ ITY+ +I C++ + E
Sbjct: 458 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 517
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V+ +M + G PD ++ LI G C +++ A L F K+ EK Y A AD + LI
Sbjct: 518 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 577
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA-MNLLRLMKKQN 544
F + ++ A K+ EM+ K R T++ LI+ ++ A M+L+ ++KK
Sbjct: 578 GAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG- 635
Query: 545 YPPFPEPFVQYISKFGTV 562
F+ +S FG V
Sbjct: 636 -------FIPSMSTFGRV 646
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++R L + ++ + + M +G D TY I + K M+++A +L
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313
Query: 325 EFMMDGPYKPSVQD----CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ D +K V D CSL+ + D+ + N+ ++ G VY+ +
Sbjct: 314 K---DAVFKGFVPDQVTYCSLINGLCAE---GDVERALELFNEAQAKGIKPDIVVYNSLV 367
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L G A ++M M G PD TY+ VI GLCK G DA V+++ G +
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 427
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G+C ++D AL +M E D + ++NG +VN +
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EMI K P T+ LIE + ++EEA ++ M ++ P F I F
Sbjct: 488 FQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 546
Query: 560 --GTVEDASEFLKALSVKEYPSSA 581
G +E A + L K Y ++A
Sbjct: 547 RNGDLEGAYLLFQKLEEKGYSATA 570
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 122/263 (46%), Gaps = 9/263 (3%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSVYD 377
DA +LF+ M+ P++ + +L ++ + + GL+ K G S++ Y+
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL---GKVIQRGMSINLFTYN 225
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
R L + GR EA +++ M+ A PD +TY+ +I GLCK ++A + L M
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC+PD T+ +I G+C + V A + K + D LING ++ V A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L E K ++P + +L++ L + A+ ++ M ++ P + + +
Sbjct: 345 LELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVIN 403
Query: 555 YISKFGTVEDASEFLKALSVKEY 577
+ K G + DA+ + +K Y
Sbjct: 404 GLCKMGNISDATVVMNDAIMKGY 426
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 162/403 (40%), Gaps = 42/403 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ D E+A FN K +P VY+ +++ L + + + M E+ C+ + +
Sbjct: 338 EGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 396
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE- 224
TY ++ L K SD + +D ++K L DV + D K+L+
Sbjct: 397 TYNIVINGLCKMGNISDATVV--MNDAIMK--------GYLPDVFTFNTLIDGYCKRLKL 446
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
D ++L + W G +TITYN +L L + V +
Sbjct: 447 DSALQLVERM--------------------W---EYGIAPDTITYNSVLNGLCKAGKVNE 483
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+EM +G + TY + F + ME+A K+ M P + L+
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N DL + + K E G S + ++ + A + AEK+ M + G
Sbjct: 544 GFC--RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 601
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D+ TY +I G CK + A L EM + G IP + T+ +I + V +A+
Sbjct: 602 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 661
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M++ +++D ++N + K+ A K+LVE + K
Sbjct: 662 IIHIMVK--IGVVPEVVDTILN---ADKKEIAAPKILVEDLMK 699
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 113/314 (35%), Gaps = 43/314 (13%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R AR +RD + E M Y I + A K++ M+
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P + ++ LRS P + L R+ G +V G++ G
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIAL--RLLRALPHRGAVAYCTVVCGLYAH----GH 166
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK---------------------------- 420
+A ++ M + P+ +++V+ LCK
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226
Query: 421 -------AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
AGR +A ++D M +PD+ T+ LI+G C + A+ +MM +
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D + +I+G+ V A +LL + + K P Q T+ +LI L +E A
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERA 344
Query: 534 MNLLRLMKKQNYPP 547
+ L + + P
Sbjct: 345 LELFNEAQAKGIKP 358
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + J ++G++ +RD ++ + + DT K+
Sbjct: 54 ASAVFAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ J V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRJAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQAHHLIDEMSVK-GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLL 410
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 286
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 287 TLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQE 346
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ DA ++IN F + V
Sbjct: 347 NIRLDEVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 407 XKLLKEM 413
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L + Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDSAFEHRKRMIQENIRLDEVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 724
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 231/513 (45%), Gaps = 40/513 (7%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
LTHE + V+ L ++ A FF W ++FR +Y + +L+ +L++
Sbjct: 112 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLIANGNLQKAHE 171
Query: 151 TLRRMKEDHCYIEE--ETYLSILGVLKKAKKASDLA----------------ALNQFHDG 192
+R M + I E ++ + + S + A N F +
Sbjct: 172 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEM 231
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKK---LEDM--KIELSDN----FVLTVLKELR 243
V+ + D+ + L+ V+G D KI + L M + + DN +L+ L E
Sbjct: 232 SVRGVCPDSSSFKLM--VIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENG 289
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ +FR + + G+K N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 290 LVN-RAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 347
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+ + K E A +LF + + YKP+V + ++ + + +
Sbjct: 348 HTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 407
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K + L +++ Y + K G FD A ++M M + GF P+ TY+ VI LCK
Sbjct: 408 KEQGLFPNVN--TYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKS 465
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R +A +L++ G D T+TILIQ C +++ +AL F +M + ++AD L +
Sbjct: 466 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNN 525
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+LI F QK++ + +L +++ + L P + T+ ++I + A+ MK+
Sbjct: 526 ILIAAFCRQKKMKESERLF-QLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKR 584
Query: 543 QNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
P + IS K V++A + +A+
Sbjct: 585 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 617
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 98/223 (43%), Gaps = 4/223 (1%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA++ + M GF PDN T + ++ LC+ G A +M + G P++ +
Sbjct: 254 GKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINF 313
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T LI G C + +A +M+ + + LI+G + A++L ++++
Sbjct: 314 TSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVR 373
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVE 563
+P T+ ++I +L A L MK+Q P + I+ K G +
Sbjct: 374 SDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFD 433
Query: 564 DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
A E + + + + P+ Y V +S + R EA +LL K
Sbjct: 434 RAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNK 476
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/433 (21%), Positives = 170/433 (39%), Gaps = 68/433 (15%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ ++ ++ L K S+KQ + L M + T+ +++ L K+
Sbjct: 306 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL--CKRGWTEK 363
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
A F + +I NV T ++ G +DK+ + + + +KE +
Sbjct: 364 AFRLFLKLVRSDIYKPNV-HTYTSMIGGYCKEDKLNRA----------EMLFSRMKEQGL 412
Query: 245 YP------------VKALGFFRW-----VGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+P KA F R + + G++ N TYN ++ L + + +
Sbjct: 413 FPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYE 472
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ + G E D TY + ++ K ++ A+ F M ++ ++ ++L+ +
Sbjct: 473 LLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFC 532
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ R+ SLG +K Y + K G FD A K MK G PD
Sbjct: 533 --RQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPD 590
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD------------------------- 442
+ TY +I GLCK ++AC + + M + G P
Sbjct: 591 SFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAMIVLE 650
Query: 443 -------IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
I+T L++ C+ +V A L F K++EK+ AD V + F + +
Sbjct: 651 PLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSAD----RVTLAAFTTACSES 706
Query: 496 GAYKLLVEMIEKV 508
G L+ ++ E++
Sbjct: 707 GKNNLVADLTERI 719
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 135/327 (41%), Gaps = 43/327 (13%)
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
R + KA F + YK N TY ++ + + + + MK++G +++
Sbjct: 358 RGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVN 417
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVA 361
TY + K + A +L M D ++P++ + ++ S+ + P+ + +
Sbjct: 418 TYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPE---AYELL 474
Query: 362 NKYESLGNSLSKSVY----------DGIHRALTKLGRFD--------------------- 390
NK S G Y I +AL R +
Sbjct: 475 NKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 534
Query: 391 ----EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
E+E++ + + + G P TY+ +I G CK G F+ A M+ +GC+PD T+
Sbjct: 535 KKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTY 594
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI G C + VD A + M+++ + ++ V + + KR + A ++V +E
Sbjct: 595 GSLISGLCKKSMVDEACKLYEAMIDRGL-SPPEVTRVTL-AYEYCKRNDSASAMIV--LE 650
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + W T +TL+ KL +++ A
Sbjct: 651 PLDKKLWIRTVRTLVRKLCSEKKVGVA 677
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFC--KEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ ++T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKNGDLKQAQDLINEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + L+
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 404
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K ++DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KL+ EM
Sbjct: 400 GSKLMKEM 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L ++ ++ +++ EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG S DL F + L Y + L +
Sbjct: 317 LIDG-----------------SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G ++ EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 150/326 (46%), Gaps = 9/326 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ I +S VL+ + A FF W + Y H+ Y+ ++ LA+
Sbjct: 13 LDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQY 72
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ W++V M+ + ++++ + I R++ + + +E+AV F M KP+V + L
Sbjct: 73 QMVWDLVNAMRNKEI-LNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFNGL 131
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ N V + ++++ + Y + + +A ++ + M
Sbjct: 132 LSALCKSKN-----VRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMI 186
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
++G PD +TYS ++ LCKAGR ++A ++ EM+ N C P +++L+ + N ++
Sbjct: 187 DSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIE 246
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F +M AD + LI+ F ++ Y++L +M K + P T +
Sbjct: 247 DAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLK-GVNPNSRTCNII 305
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYP 546
I L+G +EA + R M K P
Sbjct: 306 INSLIGRGETDEAFKIFRRMIKVCEP 331
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 108/462 (23%), Positives = 189/462 (40%), Gaps = 44/462 (9%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
LE L++ +++ E VLR+ +N A FF W ++ + S Y M+ +L
Sbjct: 9 LETALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAK 68
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ W + M+ + E + I+ +A+K + A+ F + M K N
Sbjct: 69 IRQYQMVWDLVNAMRNKE-ILNVEAFCIIMRKYARAQKVEE--AVYTF-NVMEKYNMKPN 124
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
VA + +L + K +K +++ + D FV
Sbjct: 125 VAA--FNGLLSALCKSKNVRKAQEIFDNMKDQFV-------------------------- 156
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ TY+ ++ R ++ + EM G D TY + K +++AV
Sbjct: 157 --PDSKTYSILIEGWGRAPNLPKAREIYREMIDSGCIPDEVTYSIMVDVLCKAGRVDEAV 214
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
++ + M KPS S+L+ + N + + + + E G + Y+ +
Sbjct: 215 EIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVSTFL--EMERNGVMADVAAYNALIS 272
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A K + +++K M G P++ T + +I L G ++A + M + C P
Sbjct: 273 AFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLIGRGETDEAFKIFRRMIK-VCEP 331
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ ++T++I+ C E+D AL + M +K + VLING A LL
Sbjct: 332 DVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMHTFSVLINGLCQIGNATQACVLL 391
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
EMIEK +RP ATF L L+ R L+E MNLL
Sbjct: 392 EEMIEK-GIRPSGATFGRLRHLLIKEGRKDVLKFLQEKMNLL 432
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V N
Sbjct: 108 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHKFC--KDGDIRVAQSVFNAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A + M ++N
Sbjct: 286 LCRKGDLKQARDLIDEMSMK-GLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G + LL
Sbjct: 345 DDVGYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLL 404
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L + G +A ++ M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ D ++IN F + V
Sbjct: 341 NIQLDDVG-YTALISGLCQEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 400 GSKLLKEM 407
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L R ++ ++++EM +G + D TY
Sbjct: 275 DLITYNTLIYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTT------------------ 316
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 317 --LIDGXCKEG-----------------DLETAFEHRKRMIQENIQLDDVGYTALISGLC 357
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR+ +AEK+++ M + G +PD ITY+ +I CK G +L EM+ +G +P +
Sbjct: 358 QEGRYLDAEKVLREMLSVGLKPDTITYTMIINEFCKKGDVWTGSKLLKEMQRDGQMPSVV 417
Query: 445 T 445
T
Sbjct: 418 T 418
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 156/362 (43%), Gaps = 43/362 (11%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+G F + G++ + I+Y+ ++ L + + ++ +M+++G + ++ Y I
Sbjct: 180 EAVGLFNEM-VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTI 238
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K ++ DA+ L M+D P V
Sbjct: 239 IDSLCKDTLVNDAMDLLSEMVDRGIPPDV------------------------------- 267
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
Y I LG +EA + M P+ +T++ ++ GLCK G +A
Sbjct: 268 ------VTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEA 321
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V + M + G P+ T+ L+ G+C N++D A M++K ++LING
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ ++R++ A LLVEM EK L P T+ TL++ L R +EA+NL + M P
Sbjct: 382 YCKRRRLDEAKSLLVEMSEK-ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440
Query: 548 ---FPEPFVQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G +++A + LK++ K P Y + E F G+ AK+L
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500
Query: 604 YK 605
K
Sbjct: 501 SK 502
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 186/470 (39%), Gaps = 71/470 (15%)
Query: 103 RKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
R ++ + ++A FN + ++ +P YS ++ L + LR+M+E C
Sbjct: 172 RCIEGEIKEAVGLFNEMV-RRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKP 230
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
Y +I+ L K +D AMD +L D I
Sbjct: 231 NLVAYTTIIDSLCKDTLVND---------------AMD---------LLSEMVDRGIPPD 266
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+ L L L E I F VG + NT+T+ ++ L + V
Sbjct: 267 VVTYSTILHGFCSLGHLNEATIL------FNEMVGRN--VMPNTVTFTILVDGLCKEGMV 318
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ V E M K+G E + TY + + M++A K+ + M+D P V ++L
Sbjct: 319 SEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNIL 378
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ N Y K R DEA+ ++ M
Sbjct: 379 I------------------NGY-------------------CKRRRLDEAKSLLVEMSEK 401
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
PD +TYS ++ GLC+ GR ++A N+ EM +G +PD+ T++ L+ G C +D A
Sbjct: 402 ELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEA 461
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L M E + D L ++LI G ++ A +L ++ ++P T+ +I+
Sbjct: 462 LKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFAD-GIQPTIRTYTIMIK 520
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKAL 572
LL +EA L R M+ + P + I F +D+S ++ +
Sbjct: 521 GLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLI 570
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 5/221 (2%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G EA + M G +PD I+YS VI GLCK+G A +L +MEE GC P++ +
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T +I C V+ A+ ++M+++ D +++GF S +N A L EM+
Sbjct: 236 TTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+ + P TF L++ L + EA + M K+ P + + +
Sbjct: 296 R-NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 567 EFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDLL 603
E K L + P +Y + + R EAK LL
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLL 395
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + + + + + K ++ ++ ++M+ G ++ + ILI C N V A+
Sbjct: 90 PSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISV 149
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM + DA + LING + + A L EM+ + +P ++ T+I L
Sbjct: 150 LGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH-QPDVISYSTVINGLC 208
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEYPSS-A 581
+ A+ LLR M+++ P + I K V DA + L + + P
Sbjct: 209 KSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVV 268
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + F + G EA L
Sbjct: 269 TYSTILHGFCSLGHLNEATIL 289
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 176/387 (45%), Gaps = 18/387 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + I+L ++ VL R LG FF W + GY H+ ++ +L++
Sbjct: 88 LNESGIDLRPGLIIRVLS--RCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+K E+ + + ++ + R+F M++ AV++ + M +P
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V + +E + ++ + + + G+ EA++++
Sbjct: 206 GCLLDALCKN-----GSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
MK AG EPD + ++ ++ G AG+ DA +++++M + G P++ +T+LIQ C
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 458 E-VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ +D A+ F +M +AD LI+GF ++ Y +L +M +K + P Q T
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK-GVMPSQVT 379
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALS 573
+ ++ + EE + L+ MK++ P ++ K G V++A +
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 574 VKEY-PSSAAYLQVFESFFNEGRHYEA 599
P ++ + F ++G EA
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 121/276 (43%), Gaps = 2/276 (0%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ N + +L R + + V+ +MK+ G E DI + + + M DA
Sbjct: 232 FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAY 291
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L M ++P+V ++L++++ + RV + E G Y +
Sbjct: 292 DLMNDMRKRGFEPNVNCYTVLIQALCRTEK-RMDEAMRVFVEMERYGCEADIVTYTALIS 350
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K G D+ ++ M+ G P +TY Q++ K +FE+ ++++M+ GC P
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ + ++I+ C EV A+ + +M D ++INGF SQ + A
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHF 470
Query: 502 VEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNL 536
EM+ + + P T K+L+ L+ +LE A ++
Sbjct: 471 KEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 90/268 (33%), Gaps = 42/268 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G++ N Y +++ L R E D V EM++ G E DI TY + F K+ M++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ + M PS + + ++ + K + G +Y+ +
Sbjct: 361 GYSVLDDMRKKGVMPS--QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG- 438
R KLG EA ++ M+ G P T+ +I G G +ACN EM G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 439 --------------------------------------CIPDIKTWTILIQGHCAANEVD 460
C ++ WTI I A V
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVK 538
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGF 488
A MME + + L+ G
Sbjct: 539 EACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 251 GFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
GF +W GY + +TY I+ + E + ++E+MK+ G
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ Y + R K +++AV+L+ M P V +++ +S G +
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS-----QGFLIE 465
Query: 360 VANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNAGFEPDNITY 411
N ++ + + S Y + L L R D+ E M K + K + E + +
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE-MAKDVWSCISNKTSSCELNVSAW 524
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ I L G ++AC+ +M E +P T+ L++G
Sbjct: 525 TIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 123/255 (48%), Gaps = 5/255 (1%)
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+L V ++ ++ + G + +Y+ I L K G EAE++++ M+ G PDN+ Y+
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYT 351
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
VI G CK G AC + DEM +PDI T+T +I G C + ++ A F +M+ K
Sbjct: 352 TVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ D LI+G+ + A+ + +M++K L P T+ L + L ++
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQK-GLTPNVVTYTALADGLCKNGEIDV 470
Query: 533 AMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFE 588
A LL M ++ P + V + K G +E + ++ + + YP + Y + +
Sbjct: 471 ANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMD 530
Query: 589 SFFNEGRHYEAKDLL 603
++ G +A +LL
Sbjct: 531 AYCKMGEMAKAHELL 545
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 21/406 (5%)
Query: 217 DKIGKKLEDMKIE-------LSDNFVLTVLKELRIYPVKAL--GFFRWVGEHSGYKHNTI 267
DK+ K ++++K + + +N +L + K + + L G +W G + +
Sbjct: 294 DKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKW-----GVFPDNV 348
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y ++ + +V + +EM+++ DI TY + K M +A ++F M
Sbjct: 349 VYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEM 408
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ +P + L+ ++ F V N+ G + + Y + L K G
Sbjct: 409 LVKGLEPDEVTYTALIDGYCKAG--EMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNG 466
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
D A +++ M G +P+ TY+ ++ GLCK G E +++EM+ G PD T+T
Sbjct: 467 EIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYT 526
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
L+ +C E+ +A M+ K +VL+NGF + +L+ M+EK
Sbjct: 527 TLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEK 586
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
+ P TF +L+++ + + + M + P + I + E
Sbjct: 587 -GIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645
Query: 568 --FL-KALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLLYKCPHH 609
FL K + K Y +AA Y + F+ + EA+ L + H
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKH 691
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 98/226 (43%), Gaps = 2/226 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN I+ L + ++ ++EEM G+ D TY + + K M A
Sbjct: 482 GLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKA 541
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L M++ +P++ ++L+ + G R+ G + + ++ +
Sbjct: 542 HELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGE--RLIEWMLEKGIMPNATTFNSLM 599
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ ++ KAM + G PD+ TY+ +I G CKA ++A + EM E G
Sbjct: 600 KQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYS 659
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
T+ LI+G + A F +M + A+ D+ D+ ++
Sbjct: 660 VTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVD 705
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 128/298 (42%), Gaps = 3/298 (1%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ FF+W G Y H T++YN +L VLA+ + +M G + TY + R
Sbjct: 1 MAFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLR 60
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ + E+A +F M P+V S+L+ + D + N+ G+
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAA--ELLNEMIDGGH 118
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ Y + L K+G+ EA + M G PD + Y+ +I G K G +A
Sbjct: 119 QPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYR 178
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM E GCIP + T+ L+ G E R F M+ + + + L++GF
Sbjct: 179 LFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFC 238
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A++L +EM + P ++ TL+ + + EA LLR M + P
Sbjct: 239 KMGDMVEAHRLFLEM-RSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGP 295
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 120/251 (47%), Gaps = 5/251 (1%)
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
V+ N G + Y + R+L + RF+EA + + M G P+ +YS +I
Sbjct: 36 VYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIA 95
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLC+ + ++A +L+EM + G P++ T+ L+ G C ++ A+ F++M+ +
Sbjct: 96 GLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP 155
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D + +VLI+GF + + AY+L EM+EK + P T+ +L+ +L
Sbjct: 156 DGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCI-PTVFTYNSLLSGFSRKGEFGRVQSL 214
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFN 592
+ M +Q P F + F + D E FL+ S+ P +Y + +
Sbjct: 215 FKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCS 274
Query: 593 EGRHYEAKDLL 603
+G+ +EA+ LL
Sbjct: 275 KGKPHEAQRLL 285
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 97/438 (22%), Positives = 176/438 (40%), Gaps = 36/438 (8%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
AFF W + + + Y+ +L L + T M C TY +L
Sbjct: 2 AFFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRS 61
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
L +A++ + ++ + GM + NV + ++ G K+ D EL +
Sbjct: 62 LCQAQRFEEARSVFR---GMAAQGCSPNVFSYSI-LIAGLCRGQKV-----DEAAELLNE 112
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ G++ N +TY +L L + +++ ++ M
Sbjct: 113 MI-----------------------DGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMV 149
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
G D Y + F K M +A +LFE M++ P+V + LL S +
Sbjct: 150 YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFS--RKGE 207
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
G V + G + ++ + K+G EA ++ M++ G PD ++Y+
Sbjct: 208 FGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNT 267
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ G+C G+ +A +L EM +G PDI ++ ILI G+ + +D A+ F ++ +
Sbjct: 268 LMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSG 327
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ DA +I+ +V A+ + +MI P A L+ L RL E+
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGS-APDAAVVIPLVIGLCRGERLTES 386
Query: 534 MNLLRLMKK-QNYPPFPE 550
L + M K + P PE
Sbjct: 387 CELFQAMVKFECVPLIPE 404
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 151/408 (37%), Gaps = 62/408 (15%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P++ Y +LR+L ++ R M C +Y ++ L + +K + A L
Sbjct: 50 PNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAEL 109
Query: 187 -NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD--KIGKKLEDMKIELSDNFVLTVLKELR 243
N+ DG + NV V GS K+GK E + + S +
Sbjct: 110 LNEMIDGGHQP----NV------VTYGSLLSGLCKMGKLKEAVDL-FSRMVYRGCPPDGV 158
Query: 244 IYPVKALGF---------FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+Y V GF +R E G TYN +L +R ++ ++M
Sbjct: 159 VYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDM 218
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
++G +I T+ + F K M +A +LF M P V + L+R + S P
Sbjct: 219 LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKP 278
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
R+ + G Y+ + +K G D A K+ + +G EPD +YS
Sbjct: 279 HEAQ--RLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYS 336
Query: 413 QVIFGLCKAG-----------------------------------RFEDACNVLDEMEEN 437
+I LC+AG R ++C + M +
Sbjct: 337 TIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKF 396
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
C+P I + +L+ C A D F ++ E+ + D ++ V++
Sbjct: 397 ECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 148/359 (41%), Gaps = 36/359 (10%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
+T+ S++ L K+ E F V + P VY++++ K + + +
Sbjct: 123 VTYGSLLSGLCKMGKLKEAVDLFSRMV--YRGCPPDGVVYNVLIDGFSKKGDMGEAYRLF 180
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M E C TY S+L + + + +L F D M+++ + N+ T +++
Sbjct: 181 EEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSL--FKD-MLRQGCVPNIF-TFNNLL-- 234
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
D K+G +E ++ L E+R G + ++YN +
Sbjct: 235 -DGFCKMGDMVEAHRLFL----------EMR---------------SLGCPPDVVSYNTL 268
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+R + + ++ EM + G DI +Y + + K ++ A+KLF +
Sbjct: 269 MRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGL 328
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P S ++ + +G F V + G++ +V + L + R E+
Sbjct: 329 EPDAFSYSTIIDCLCRAGK--VGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
++ +AM P Y+ +++ LCKA R +D C + E+ E G PD++ ++++
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILE 445
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 216/575 (37%), Gaps = 122/575 (21%)
Query: 7 VLSSLRLANSLLSIR-SSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTS 65
+L S +A L ++R + R + R F S H + I+T + FS+
Sbjct: 147 LLQSFAVAAHLAAVRDPGAARAILVRALRF-------PSPHRHFVEQFISTYKA--FSSD 197
Query: 66 PNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDND---------PEKASAFF 116
P S +L+L C S L +L + + ES VL +L D PEK + +
Sbjct: 198 P-VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSY 256
Query: 117 N----WVCDKKQFR------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
N +C + + P Y +M+ L+ L M
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV--------DVVLG 212
+ Y S++ +L + SD A+ D ++ + +D T V D+
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSD--AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+W D++ K+ G + +TY +
Sbjct: 375 RNWFDEMQKR--------------------------------------GLAADGVTYTAL 396
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ L R +++ V++EM+ +G ++D TY + + K M +A + M+
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
P+V Y + L K G A
Sbjct: 457 TPNV-------------------------------------VTYTALSDGLCKQGDVCAA 479
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ M + G E + TY+ +I GLCKAG E A + +M+E G PD+ T+T +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + E+DRA +M++K +VL+NGF RV G +LL M+EK + P
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHP 598
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ +L+++ + ++ + + M Q P
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 144/348 (41%), Gaps = 20/348 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT +YN +L+ L ++D + +EM D+ TY + + +E A+KL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLL 308
Query: 325 -EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E G V S++ D RV G L +V+ +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSD---AVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G A M+ G D +TY+ +I GLC+AG ++A VL EME+ G D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T+LI G+C ++ A L KM++K + L +G Q V A +LL E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 504 MIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
M K + L + T+ +LI L A LE+AM + M + P Y + G +
Sbjct: 486 MCSKGLELNIF--TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP---DVYTYTTIIGAL 540
Query: 563 EDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E +A S+ + P+ Y + F GR K LL
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 121/309 (39%), Gaps = 15/309 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ + +M + G + D+ TY I + + ++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
L + M+D KP++ ++L+ + RV L L K++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFC--------MSGRVEGGKRLLEWMLEKNIHPNTT 601
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + + ++ K M + P+ TY+ +I G CKA ++A EM
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G ++ LI+ + A F KM + A+ D+ + I+ ++ +
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYIDLSFNEDNL 721
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR-LEEAMNLLRLMKKQNYPPFPEPFV 553
L E++E ++ T E+ + R LEE +L + Y E
Sbjct: 722 ESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLEEMWEVLGYYRYVYYSRLLELIC 781
Query: 554 QYISKFGTV 562
I+ G +
Sbjct: 782 HCITSVGQI 790
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 159/355 (44%), Gaps = 20/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + +N++ +M++ E + Y I K++ M+DA
Sbjct: 830 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 889
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF+ M +P+V S L+ + + R ++ L + + + +
Sbjct: 890 LNLFKEMETKGIRPNVVTYSSLISCLCNYG--------RWSDASRLLSDMIERKINPDVF 941
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +P +TYS +I G C R ++A + + M
Sbjct: 942 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 1001
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C PD+ T+ LI+G C V+ + F +M ++ + ++LI G
Sbjct: 1002 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 1061
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A ++ EM+ + P T+ TL++ L +LE+AM + +++ P +
Sbjct: 1062 DMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 1120
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G VED + LS+K P AY + F +G EA D L+K
Sbjct: 1121 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFK 1174
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T ++ R V D ++V++M + GY+ DI Y I K + + DA
Sbjct: 253 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 312
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
F+ + +P+V + L+ + + + R ++ L + + K +
Sbjct: 313 FDFFKEIERKGIRPNVVTYTALVNGLCNSS--------RWSDAARLLSDMIKKKITPNVI 364
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + A K G+ EA+++ + M +PD +TYS +I GLC R ++A + D M
Sbjct: 365 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 424
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC+ D+ ++ LI G C A V+ + F +M ++ ++ + LI GF V
Sbjct: 425 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 484
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A + +M + + P T+ L+ L LE+A+ + M+K+ +
Sbjct: 485 DKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 543
Query: 555 YI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I K G VE+A +LS+K P Y + +G +E + L K
Sbjct: 544 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 598
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + S LL +I+ +N D+ V + + +
Sbjct: 665 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV--VISLGEQMQ 722
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+LG + Y + + + A ++ M G+EP+ +T S ++ G C + R
Sbjct: 723 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 782
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M G P+ T+ LI G N+ A+ +M+ K D V++
Sbjct: 783 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 842
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + + A+ LL +M E+ +L P + T+I+ L + +++A+NL + M+ +
Sbjct: 843 NGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P + + ++F EG+ EA+
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 602 L 602
L
Sbjct: 962 L 962
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 149/343 (43%), Gaps = 11/343 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ ++ R + V+ +M K GYE +I T + + + +
Sbjct: 722 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 781
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+AV L + M Y+P+ + L+ + N + L+ R+ K G
Sbjct: 782 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK----GCQPDLVT 837
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G D A ++ M+ EP + Y+ +I GLCK +DA N+ EME
Sbjct: 838 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 897
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P++ T++ LI C A + M+E+ + D LI+ F+ + ++
Sbjct: 898 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 957
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM-KKQNYPPFP--EPF 552
A KL EM+++ + P T+ +LI RL+EA + M K +P
Sbjct: 958 EAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 1016
Query: 553 VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
++ K+ VE+ E + +S + ++ Y + + F G
Sbjct: 1017 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T++ ++ + + + + +EM K + I TY + F +++A ++F
Sbjct: 939 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G+ VFR ++ +GN+++ Y+ + + L
Sbjct: 999 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT---YNILIQGL 1055
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+++ K M + G P+ +TY+ ++ GLCK G+ E A V + ++ + P I
Sbjct: 1056 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 1115
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K D + +I+GF + A L E
Sbjct: 1116 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 1175
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P + TLI L E + L++ M+ +
Sbjct: 1176 MKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 1216
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ LF M+ PS+ D + LL +I + D +V + K E LG +
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRNDLYTF 226
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + A ++ M G+EPD +T ++ G C+ R DA +++D+M E
Sbjct: 227 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 286
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PDI + +I C V+ A F ++ K + L+NG + R +
Sbjct: 287 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +LL +MI+K ++ P T+ L++ + ++ EA L M + + P
Sbjct: 347 AARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 396
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 4/194 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ KL ++D + K M+ G D T++ VI C + A ++L +M + G P
Sbjct: 197 AIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEP 256
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T L+ G C N V A+ KM+E Y D + +I+ KRVN A+
Sbjct: 257 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 316
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
E IE+ +RP T+ L+ L + R +A LL M K+ P + + F
Sbjct: 317 KE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVK 375
Query: 560 -GTVEDASEFLKAL 572
G V +A E + +
Sbjct: 376 NGKVLEAKELFEEM 389
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ITY+ +L ++ V + + EEM + + DI TY + +++A ++F
Sbjct: 362 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 421
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ V + L+ + G+ +FR ++ + N+++ Y+ + +
Sbjct: 422 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT---YNTLIQGF 478
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D+A++ M G PD TY+ ++ GLC G E A + ++M++ DI
Sbjct: 479 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 538
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T +I+G C +V+ A F + K D +++G ++ ++ L +
Sbjct: 539 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 598
Query: 504 M 504
M
Sbjct: 599 M 599
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K +++ ++ +ME G D+ T+ I+I C +V AL
Sbjct: 186 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 245
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM++ Y+ D + L+NGF + RV+ A L+ +M+E + +P + +I+ L
Sbjct: 246 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLC 304
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEY-PSSA 581
+R+ +A + + ++++ P + ++ DA+ L + K+ P+
Sbjct: 305 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 364
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + ++F G+ EAK+L
Sbjct: 365 TYSALLDAFVKNGKVLEAKEL 385
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ ++ L H+ + + + + M +G D+ +Y + F K + +ED +KLF
Sbjct: 397 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 456
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + + L++ + D F ++ + G S Y+ + L
Sbjct: 457 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF--FSQMDFFGISPDIWTYNILLGGLC 514
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + M+ + D +TY+ VI G+CK G+ E+A ++ + G PDI
Sbjct: 515 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 574
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNY--------DADADLLDVLINGFLS 490
T+T ++ G C + + KM ++ D D L LI LS
Sbjct: 575 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS 628
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKL 323
+ +TYN +++ +++ V + V EM + G + TY I I FQ + A ++
Sbjct: 1009 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEI 1067
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---YDGIH 380
F+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 1068 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQRSKMEPTIYTYNIMI 1122
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K G+ ++ + + G +PD + Y+ +I G C+ G E+A + EM+E+G +
Sbjct: 1123 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 1182
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + LI+ + + + +M + DA + ++ N
Sbjct: 1183 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 1228
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 14/363 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ S L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKW-- 165
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL SV ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK +
Sbjct: 166 ---SLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKM 222
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+DA + DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + L
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G + + A L+ EMI K L P + T+ TLI+ LE A + M K+N
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMK-GLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ IS G DA + L+ L+V P Y + F +G +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 601 DLL 603
LL
Sbjct: 402 KLL 404
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 10/246 (4%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 168 RPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANV 227
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YDGI 379
LF+ M+D P+ + L+ DL + +++ + L SLS + Y+ +
Sbjct: 228 LFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYNTL 282
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENG 438
L K G +A+ ++ M G PD ITY+ +I G CK G E A M +EN
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 343 RLDDV-AYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 499 KLLVEM 504
KLL EM
Sbjct: 402 KLLKEM 407
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M N G +P+ TY+ +I CK G +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 431 LDEMEENGCIPDIKT 445
L EM+ +G +P + T
Sbjct: 404 LKEMQRDGYMPSVVT 418
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 152/349 (43%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + ++ + V ++V +M++ ++D+ Y I F K ++ +A
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNA 193
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ LF M DG +V SL+ S D + R + + N ++ + +
Sbjct: 194 LVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVIT---FTAL 250
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A + G+F EA+K + M +PD TY+ +I GLC G+ ++A +LD M GC
Sbjct: 251 INAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGC 310
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ LI G C VD +M ++ D + +I G+ R + A
Sbjct: 311 FPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQ- 369
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
E+ ++ RP T+ L+ L R+E+A+ L M+K + + +
Sbjct: 370 ---EIFSRMGSRPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGM 426
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G VEDA + +LS K S F R ++ D LY+
Sbjct: 427 CMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYR 475
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 10/303 (3%)
Query: 308 SRQFQKFRM---MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
R F R+ +++A+ LF M+ PS+ + S LL +I+ N DL V + +
Sbjct: 38 GRAFTTKRLSMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDL--VISLFHNM 95
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E G Y+ + L + RF A ++ M G+EPD +T S +I G C+ R
Sbjct: 96 EICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A +++ +MEE C D+ + +I G C V+ AL+ F +M AD + L
Sbjct: 156 FGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSL 215
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ G R + A +L+ +M+ + + P TF LI + + EA M ++
Sbjct: 216 VTGLCCSGRRSDAARLMRDMVMR-DIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRC 274
Query: 545 YPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK 600
P + + G V++A + L + K +P Y + F R E
Sbjct: 275 IDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGT 334
Query: 601 DLL 603
L+
Sbjct: 335 KLV 337
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 5/207 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TYN ++ L H V + +++ M +G D+ TY + F K + +++ KL
Sbjct: 278 DVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLV 337
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + +++ PD + +G+ + Y + L
Sbjct: 338 REMSQRGLVVDTVTFNTIIQGYFQAGRPDAA-----QEIFSRMGSRPNIRTYSILLYGLC 392
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
R ++A + ++M+ + E D TY+ VI G+C G EDA ++ + G PD+
Sbjct: 393 YNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVV 452
Query: 445 TWTILIQGHCAANEVDRALLCFAKMME 471
T+T +I G C D+A + KM E
Sbjct: 453 TYTTMISGFCRKRLWDKADFLYRKMQE 479
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 89/184 (48%), Gaps = 11/184 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ + + V + +V EM + G +D T+ I + + + + A
Sbjct: 309 GCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAA 368
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSKSVYD 377
++F M +P+++ S+LL + + LV +ES+ S L + Y+
Sbjct: 369 QEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVL-----FESMQKSEMELDITTYN 420
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + +G ++A + ++ G EPD +TY+ +I G C+ ++ A + +M+E+
Sbjct: 421 IVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQED 480
Query: 438 GCIP 441
G +P
Sbjct: 481 GLLP 484
>gi|356498649|ref|XP_003518162.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Glycine max]
Length = 1034
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 175/397 (44%), Gaps = 11/397 (2%)
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+DW I +KLE I+ S V+ +L+ ++ L FF W+G+ +GY+H +YN
Sbjct: 629 TDWS-LIQEKLEKSTIQFSPELVMEILQSCNMHGSSVLKFFSWIGKQTGYRHTAESYNIA 687
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+++ + + ++ EM++ Y + +T+ + + + + E A+ F+ M Y
Sbjct: 688 IKIAGCGKDFKHMRSLFFEMRRNSYPITSETWTIMIMVYGRTGLTEMAMNCFKEMKADDY 747
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
PS L+ ++ + ++ + S G K + + L ++GR +A
Sbjct: 748 VPSRSTYKYLIIALCGRKGRKVDDALKIYGEMISAGYVPDKELIETYLGCLCEVGRVLDA 807
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ +++N G+ ++YS I LC+AG+ E+A + +E+ E I D T+ ++ G
Sbjct: 808 RRCTDSLQNFGYTVP-LSYSLFIRALCRAGKVEEALALHEEVGEEKFIIDQLTFGSIVHG 866
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
++ AL M + + LI F +K+V A + EM+ P
Sbjct: 867 LLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKEKQVEKAIETFEEMLHS-GYEP 925
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQYISKFGTVEDASE 567
T+ LI + R +A ++ MK + PFP+ F+ + K G E+
Sbjct: 926 TIVTYSALIRGYMNVGRPIDAWDIFYRMKLKG--PFPDFKTYSMFLTCLCKVGKSEEGMR 983
Query: 568 FL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + L PS+ + V EG+H A+ +L
Sbjct: 984 LISEMLDSGIVPSTINFRTVVYGLNREGKHDLARVVL 1020
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 183/449 (40%), Gaps = 43/449 (9%)
Query: 172 GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS 231
GV + A + D+ L G + E + V + ++V + + ++LE++ L+
Sbjct: 98 GVCENAAQNVDI--LEDAQMGNMGEKDVSRVVSEITEIVRVENDSSSVEERLENLSYGLN 155
Query: 232 DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
VLK P AL F W+ G+ H T TYN +L + + +VEE
Sbjct: 156 SEVFHMVLKRCFKVPQLALRVFNWLKLKDGFSHTTRTYNTMLHIAREAKEFGLVKKLVEE 215
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M + G + D++T+ I + K R + +A+ FE M +P ++ S+ S
Sbjct: 216 MDECGIQKDVNTWTIIINHYGKARKISEALLAFENMKRCGCEPDAVSYGAIICSLCSAGK 275
Query: 352 PDLGLVF-----------------RVAN---------KYESLGNSL-------SKSVYDG 378
D+ + F V N LGN + K V+
Sbjct: 276 RDIAMEFYNEMVRKDMVLDVRLYKMVMNCMARSGDIAAVSLLGNDMIRLSVMPEKCVHGC 335
Query: 379 IHRALTKLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ ++ G +EA ++++ + K+ EP+N Y ++ GLCKAGR DA ++D M+
Sbjct: 336 MLKSFCISGSIEEALELIRELKSKDLDLEPEN--YETLVRGLCKAGRITDALEIVDIMKR 393
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+ D + I+I G+ N+VDRAL F M E L+ R
Sbjct: 394 RDMV-DGRVHGIIINGYLGRNDVDRALEVFQCMKESGCVPTISTYTELMLHLFRLDRYEE 452
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L EM+ K ++P ++ + + +A + + M+ Q P + F +I
Sbjct: 453 ACMLYDEMLGK-GIKPDVVAITAMVAGHVSQNHISDAWKMFKSMECQGIKPTWKSFAVFI 511
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
+ + +K L E +S + +Q
Sbjct: 512 KELCKASQTDDIVKVL--HEMQASKSRIQ 538
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 97/443 (21%), Positives = 183/443 (41%), Gaps = 69/443 (15%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S +E +LE LS L E VL++ P+ A FNW+ K F ++ Y+ ML
Sbjct: 140 SSSVEERLENLSYGLNSEVFHMVLKRCFKVPQLALRVFNWLKLKDGFSHTTRTYNTMLH- 198
Query: 139 LVNKDSLKQFWVTLRRMKE-DHCYIEEE--TYLSILGVLKKAKKASDLAALNQFHDGMVK 195
+ +++ K+F + + ++E D C I+++ T+ I+ KA+K S+ AL F +
Sbjct: 199 -IAREA-KEFGLVKKLVEEMDECGIQKDVNTWTIIINHYGKARKISE--ALLAFENMKRC 254
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT-VLKELRIYPVKALGFFR 254
D V+ + L S GK+ D+ +E + V ++ ++R+Y + R
Sbjct: 255 GCEPDAVSYGAIICSLCS-----AGKR--DIAMEFYNEMVRKDMVLDVRLYKMVMNCMAR 307
Query: 255 W--VGEHSGYKHNTI---------TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ S ++ I + +L+ S+ + ++ E+K + +++ +
Sbjct: 308 SGDIAAVSLLGNDMIRLSVMPEKCVHGCMLKSFCISGSIEEALELIRELKSKDLDLEPEN 367
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + R K + DA+++ + M + ++ G++ N
Sbjct: 368 YETLVRGLCKAGRITDALEIVDIM----------------KRRDMVDGRVHGIII---NG 408
Query: 364 YESLGNSLSKSVYDGIHRALTKLGR--FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
Y LGR D A ++ + MK +G P TY++++ L +
Sbjct: 409 Y---------------------LGRNDVDRALEVFQCMKESGCVPTISTYTELMLHLFRL 447
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
R+E+AC + DEM G PD+ T ++ GH + N + A F M +
Sbjct: 448 DRYEEACMLYDEMLGKGIKPDVVAITAMVAGHVSQNHISDAWKMFKSMECQGIKPTWKSF 507
Query: 482 DVLINGFLSQKRVNGAYKLLVEM 504
V I + + K+L EM
Sbjct: 508 AVFIKELCKASQTDDIVKVLHEM 530
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 88/409 (21%), Positives = 169/409 (41%), Gaps = 62/409 (15%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
DWS ++ KLE+ + + + E V+ +L+ + FF+W+ + +R ++ Y++ +
Sbjct: 630 DWS-LIQEKLEKSTIQFSPELVMEILQSCNMHGSSVLKFFSWIGKQTGYRHTAESYNIAI 688
Query: 137 RNL-VNKD--SLKQFWVTLRR--------------------------------MKEDHCY 161
+ KD ++ + +RR MK D
Sbjct: 689 KIAGCGKDFKHMRSLFFEMRRNSYPITSETWTIMIMVYGRTGLTEMAMNCFKEMKADDYV 748
Query: 162 IEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI 219
TY ++ L +K +K D AL + + + D K L++ LG + +
Sbjct: 749 PSRSTYKYLIIALCGRKGRKVDD--ALKIYGEMISAGYVPD---KELIETYLGCLCE--V 801
Query: 220 GKKLEDMKIELS-DNFVLTVLKELRIY---------PVKALGFFRWVGEHSGYKHNTITY 269
G+ L+ + S NF TV ++ +AL VGE + + +T+
Sbjct: 802 GRVLDARRCTDSLQNFGYTVPLSYSLFIRALCRAGKVEEALALHEEVGEEK-FIIDQLTF 860
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
I+ L R + + V+ MK+ G I + + F K + +E A++ FE M+
Sbjct: 861 GSIVHGLLRKGRLEEALAKVDVMKQNGITPTIHVFTSLIVHFFKEKQVEKAIETFEEMLH 920
Query: 330 GPYKPSVQDCSLLLRSISSINNP--DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
Y+P++ S L+R ++ P + +R+ K G Y L K+G
Sbjct: 921 SGYEPTIVTYSALIRGYMNVGRPIDAWDIFYRMKLK----GPFPDFKTYSMFLTCLCKVG 976
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ +E +++ M ++G P I + V++GL + G+ + A VL + E
Sbjct: 977 KSEEGMRLISEMLDSGIVPSTINFRTVVYGLNREGKHDLARVVLQQKSE 1025
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 156/351 (44%), Gaps = 13/351 (3%)
Query: 260 SGYKHNTITYNGILRVLARHE-SVR-DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
SG+ ++YN +L + R SV+ V EM + ++ TY + R F +
Sbjct: 171 SGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGEL 230
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+ + F M P+V + L+ + + D GL+ +++K G +
Sbjct: 231 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSK----GMQPNLIS 286
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ I L + G EA ++++ M GF PD +TY+ ++ G CK G F A + EM
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
NG P + T+T LI C A ++RA+ F +M + + LI+GF Q +N
Sbjct: 347 RNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLN 406
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
AY++L EM E P T+ I R+EEA+ +++ M ++ P +
Sbjct: 407 EAYRILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTI 465
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
IS F G ++ A + + + K P + Y + + R EA DL
Sbjct: 466 ISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 516
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 7/265 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +TY ++ + + ++ ++M+ G + TY + F + ++ +
Sbjct: 348 NGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNE 407
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYD 377
A ++ M + + PSV + + + + LG+V + K G + Y
Sbjct: 408 AYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK----GLAPDVVSYS 463
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + G D A +M + M G PD +TYS +I GLC+ R +AC++ EM +
Sbjct: 464 TIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDM 523
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD T+T LI +C ++++AL +M+ K + DA VLING Q R A
Sbjct: 524 GLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREA 583
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIE 522
+LL ++I + + P T+ TLIE
Sbjct: 584 KRLLFKLIYEESV-PSDVTYDTLIE 607
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 115/297 (38%), Gaps = 43/297 (14%)
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
S ++P +F+ + NS S +V+D + ++ + L D+A + K++GF P
Sbjct: 118 SASDPSGSSIFQCLKDSYHVYNS-SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPG 176
Query: 408 NITYSQV-------------------------------------IFGLCKAGRFEDACNV 430
++Y+ V I G C G +
Sbjct: 177 VLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGC 236
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
EME NGC+P++ T+ LI +C +D A M K + +V+ING
Sbjct: 237 FGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCR 296
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ + A+++L EM K P + T+ TL+ +A+ + M + P
Sbjct: 297 EGSMKEAWEILEEMGYK-GFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVV 355
Query: 551 PFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I+ K + A EF + ++ P+ Y + + F +G EA +L
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRIL 412
>gi|225439358|ref|XP_002269283.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Vitis vinifera]
Length = 1048
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 174/398 (43%), Gaps = 11/398 (2%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW I + LE ++ + V+ +L+ ++ AL FF WVG+ GY H T TYN +
Sbjct: 646 DWC-LIEEALEKCTVQFTSQLVVEILRSCSLHGHAALLFFSWVGKRDGYSHTTETYNMGI 704
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
++ ++ R N+ EM+++G+ + DT+ + Q+ + + E A++ F M K
Sbjct: 705 KISGCSKNFRSMRNLFFEMRRKGHPVTPDTWTIMIMQYGRAGLTEIALRNFAEMKANDCK 764
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+ L+ + + + + G K + + + L ++G+ +A
Sbjct: 765 PNGSTYKYLIICLCGRKGRKVDEAIKTFLEMIRAGYVPDKELVESYLKCLCEVGKLLDAR 824
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ +A+ GF ++YS I LC+AGR E+A ++DE+ D + L+ G
Sbjct: 825 RCTEALCKLGFTIP-LSYSLYIRALCRAGRLEEALALVDEVGPERVTLDQYIYGSLVHGL 883
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
+ AL M + + LI F +K++ A + +M E+ P
Sbjct: 884 LRRGRLKEALEKVDSMKQIGIHPTVHVYTSLIVHFFKEKQMRKALETFQKMKEE-GCEPT 942
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQYISKFGTVEDASEF 568
T+ LI + +A N+ L++ + PFP+ F+ + K G E+A +
Sbjct: 943 IVTYSALIRGHMAMGNFVDARNVFGLLQLKG--PFPDFKTYSMFISCLCKVGKSEEALQL 1000
Query: 569 L-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
L + L PS+ + V EG+H A +L K
Sbjct: 1001 LSEMLDSGIIPSTINFRTVMFGLNREGKHSLANIVLQK 1038
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 186/454 (40%), Gaps = 82/454 (18%)
Query: 199 MDNVAKTL-VDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
+D + K + D+ GS + +KLE V VLK P AL FF WV
Sbjct: 142 VDEITKIVRADIGTGS-----MEEKLEKSGFVFDSEVVEKVLKRCFKVPHLALRFFNWVK 196
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+G H T TYN +L + + ++ EM+++G + DI T+ + + K +++
Sbjct: 197 FRNGGCHTTRTYNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTWTILISHYGKAKLI 256
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANK--------YESL 367
A+ + E M +P V +L+RS+ + D+ L F + K YE L
Sbjct: 257 GKALLILEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQKEMGLDMSLYELL 316
Query: 368 GNSLSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAM--KNA 402
L+ S V+ + ++ GR EA ++++ + KN
Sbjct: 317 LTCLAGSGDIAGVQLVADDMIRRSQIPERDVFSCMLKSFCIAGRIREALELIRDLNDKNL 376
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLD------------------------------ 432
EP++ + ++ GLC+A R DA ++D
Sbjct: 377 TLEPND--FETLVKGLCRADRITDAAEIVDIMKKRKVVDAKVYGIIISGYLRRNDIPKAF 434
Query: 433 ----EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
M E+G +P I T+T L+Q NE + + +M+E+ + D+ + ++ G
Sbjct: 435 DVLQTMTESGYLPTISTYTELMQHLFRLNEYQKGCKLYDEMLERGVEPDSVAITAMVAGH 494
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ Q + A+K+ M E+ W+ ++ I++L R +E + +L M+
Sbjct: 495 VRQNHIFEAWKVFNSMQERGIRATWK-SYSVFIKELCKISRTDEVIKVLNEMQASKIIIG 553
Query: 549 PEPF---VQYISKFGTVEDASEFLK-ALSVKEYP 578
E F + Y+ K G E + ++ + K YP
Sbjct: 554 DEVFNWVISYLEKKGETEMVKKVMQMQRTCKFYP 587
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/255 (23%), Positives = 119/255 (46%), Gaps = 5/255 (1%)
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
P L L F K+ + G +++ Y+ + + F EK++ M+ G + D T+
Sbjct: 185 PHLALRFFNWVKFRNGGCHTTRT-YNTMLYIAGEAKEFGLVEKLIGEMEEKGCKRDIKTW 243
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I KA A +L++M ++GC PD+ + ILI+ C A + D AL + +M++
Sbjct: 244 TILISHYGKAKLIGKALLILEKMWKSGCEPDVAAYMILIRSLCNAQKADIALEFYKEMVQ 303
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K D L ++L+ + G + +MI + ++ P + F +++ A R+
Sbjct: 304 KEMGLDMSLYELLLTCLAGSGDIAGVQLVADDMIRRSQI-PERDVFSCMLKSFCIAGRIR 362
Query: 532 EAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFE 588
EA+ L+R + +N P E V+ + + + DA+E + + ++ + Y +
Sbjct: 363 EALELIRDLNDKNLTLEPNDFETLVKGLCRADRITDAAEIVDIMKKRKVVDAKVYGIIIS 422
Query: 589 SFFNEGRHYEAKDLL 603
+ +A D+L
Sbjct: 423 GYLRRNDIPKAFDVL 437
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 176/387 (45%), Gaps = 18/387 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + I+L ++ VL R LG FF W + GY H+ ++ +L++
Sbjct: 88 LNESGIDLRPGLIIRVLS--RCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+K E+ + + ++ + R+F M++ AV++ + M +P
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V + +E + ++ + + + G+ EA++++
Sbjct: 206 GCLLDALCKN-----GSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
MK AG EPD + ++ ++ G AG+ DA +++++M + G P++ +T+LIQ C
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 458 E-VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ +D A+ F +M +AD LI+GF ++ Y +L +M +K + P Q T
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK-GVMPSQVT 379
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALS 573
+ ++ + EE + L+ MK++ P ++ K G V++A +
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 574 VKEY-PSSAAYLQVFESFFNEGRHYEA 599
P ++ + F ++G EA
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 2/273 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + +L R + + V+ +MK+ G E DI + + + M DA L
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M ++P+V ++L++++ + RV + E G Y +
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEK-RMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G D+ ++ M+ G P +TY Q++ K +FE+ ++++M+ GC PD+
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ++I+ C EV A+ + +M D ++INGF SQ + A EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 505 IEK-VRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ + + P T K+L+ L+ +LE A ++
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 90/268 (33%), Gaps = 42/268 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G++ N Y +++ L R E D V EM++ G E DI TY + F K+ M++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ + M PS + + ++ + K + G +Y+ +
Sbjct: 361 GYSVLDDMRKKGVMPS--QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG- 438
R KLG EA ++ M+ G P T+ +I G G +ACN EM G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 439 --------------------------------------CIPDIKTWTILIQGHCAANEVD 460
C ++ WTI I A V
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVK 538
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGF 488
A MME + + L+ G
Sbjct: 539 EACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 251 GFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
GF +W GY + +TY I+ + E + ++E+MK+ G
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ Y + R K +++AV+L+ M P V +++ +S G +
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS-----QGFLIE 465
Query: 360 VANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNAGFEPDNITY 411
N ++ + + S Y + L L R D+ E M K + K + E + +
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE-MAKDVWSCISNKTSSCELNVSAW 524
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ I L G ++AC+ +M E +P T+ L++G
Sbjct: 525 TIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 216/575 (37%), Gaps = 122/575 (21%)
Query: 7 VLSSLRLANSLLSIR-SSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTS 65
+L S +A L ++R + R + R F S H + I+T + FS+
Sbjct: 147 LLQSFAVAAHLAAVRDPGAARAILVRALRF-------PSPHRHFVEQFISTYKA--FSSD 197
Query: 66 PNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDND---------PEKASAFF 116
P S +L+L C S L +L + + ES VL +L D PEK + +
Sbjct: 198 P-VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSY 256
Query: 117 N----WVCDKKQFR------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
N +C + + P Y +M+ L+ L M
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV--------DVVLG 212
+ Y S++ +L + SD A+ D ++ + +D T V D+
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSD--AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+W D++ K+ G + +TY +
Sbjct: 375 RNWFDEMQKR--------------------------------------GLAADGVTYTAL 396
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ L R +++ V++EM+ +G ++D TY + + K M +A + M+
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
P+V Y + L K G A
Sbjct: 457 TPNV-------------------------------------VTYTALSDGLCKQGDVCAA 479
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ M + G E + TY+ +I GLCKAG E A + +M+E G PD+ T+T +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + E+DRA +M++K +VL+NGF RV G +LL M+EK + P
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHP 598
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ +L+++ + ++ + + M Q P
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 142/347 (40%), Gaps = 18/347 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT +YN +L+ L ++D + +EM D+ TY + + +E A+KL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLL 308
Query: 325 -EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E G V S++ D RV G L +V+ +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSD---AVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G A M+ G D +TY+ +I GLC+AG ++A VL EME+ G D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T+LI G+C ++ A L KM++K + L +G Q V A +LL E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE 563
M K L T+ +LI L A LE+AM + M + P Y + G +
Sbjct: 486 MCSK-GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP---DVYTYTTIIGALC 541
Query: 564 DASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E +A S+ + P+ Y + F GR K LL
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/309 (20%), Positives = 122/309 (39%), Gaps = 15/309 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ + +M + G + D+ TY I + + ++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
L + M+D KP++ ++L+ + RV L L K++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFC--------MSGRVEGGKRLLEWMLEKNIHPNTT 601
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + + ++ K M + P+ TY+ +I G CKA ++A EM
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G ++ LI+ + A F KM ++ A+ D+ + I+ ++ +
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNL 721
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR-LEEAMNLLRLMKKQNYPPFPEPFV 553
L E++E ++ T E+ + R LEE +L + Y E
Sbjct: 722 ESTLALCDELVEVTLVKSIADTDDDFAEEHISIMRFLEEMWEVLGYYRYVYYSRLLELIC 781
Query: 554 QYISKFGTV 562
I+ G +
Sbjct: 782 HCITSVGQI 790
>gi|242039157|ref|XP_002466973.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
gi|241920827|gb|EER93971.1| hypothetical protein SORBIDRAFT_01g017690 [Sorghum bicolor]
Length = 504
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 172/384 (44%), Gaps = 24/384 (6%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRI---------YPVKALGFFRWVGEHSGYKHNTITYNG 271
+ L++M+ ++S V VL + + YP A FF W G+ GY+H T YN
Sbjct: 125 QALDEMRPKVSLELVREVLFRIVVSVDCVNRERYPKLAYKFFIWAGQQEGYQHGTSMYNL 184
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY----IKISRQFQKFRMMEDAVKLFEFM 327
+++V A V+ W + EEM +G + T+ + + R++E +K F
Sbjct: 185 VMKVFAECGEVKAMWRLFEEMMDKGLPVSSRTFHLLICASGKAGLRRRLVEGFIKSSTF- 243
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
Y+P + +L ++ +I L+ V K G S Y+ + RA LG
Sbjct: 244 ---NYRPFRNAFNAILHTLLTIEQ--YSLIEWVHEKMILEGYSPDVLTYNVVMRAKYMLG 298
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ D+ +++ M G PD TY+ ++ L K + A N+L+ M + GC+P++ +T
Sbjct: 299 KLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSDVGCVPNVLHFT 358
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G A ++ F +M++K D D V+I+ +++ A + +M+ +
Sbjct: 359 NLIDGLGRAGNLEACKYFFDEMIKKGCDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLR 418
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
+L P T+ ++I L ++A +L+ M P F Y S + A +
Sbjct: 419 GQL-PNVYTYNSMIRGLCTVGEFDKAFAMLKDMDSHGCTP---NFSVYSSLVSRLRSAGK 474
Query: 568 FLKALSVKEYPSSAA-YLQVFESF 590
+A +V +Y + YL + F
Sbjct: 475 DTQANNVIKYMTDKGHYLHLLSRF 498
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/382 (21%), Positives = 150/382 (39%), Gaps = 59/382 (15%)
Query: 86 LEELSPKLTHESVVYVLRKL---------DNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
L+E+ PK++ E V VL ++ + P+ A FF W ++ ++ +++Y+L++
Sbjct: 127 LDEMRPKVSLELVREVLFRIVVSVDCVNRERYPKLAYKFFIWAGQQEGYQHGTSMYNLVM 186
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
+ +K W M + + T+ ++ KA L +G +K
Sbjct: 187 KVFAECGEVKAMWRLFEEMMDKGLPVSSRTFHLLICASGKAGLRRRLV------EGFIKS 240
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ + N +L L + Y + WV
Sbjct: 241 STFNY------------------------RPFRNAFNAILHTLLTIEQYSL-----IEWV 271
Query: 257 GEH---SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
E GY + +TYN ++R + F +++EM ++G D+ TY + K
Sbjct: 272 HEKMILEGYSPDVLTYNVVMRAKYMLGKLDQFHRLLDEMGRDGLTPDLHTYNLLLHVLGK 331
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY---ESLGNS 370
A+ L +M D P+V + L+ + N + A KY E +
Sbjct: 332 GDKPLAALNLLNYMSDVGCVPNVLHFTNLIDGLGRAGNLE-------ACKYFFDEMIKKG 384
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
V Y + + G F+EA++ M G P+ TY+ +I GLC G F+ A
Sbjct: 385 CDPDVVCYTVMISSYVAAGEFEEAQRFFDDMLLRGQLPNVYTYNSMIRGLCTVGEFDKAF 444
Query: 429 NVLDEMEENGCIPDIKTWTILI 450
+L +M+ +GC P+ ++ L+
Sbjct: 445 AMLKDMDSHGCTPNFSVYSSLV 466
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 145/308 (47%), Gaps = 11/308 (3%)
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M+ +PSV ++LL ++ + G V ++ + G + + Y+ I + +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVC--KSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR D+A++++ + + GF+PD ++Y+ V+ GLC A R++D + EM + C+P+ T+
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+L++ C V+RA+ +M + + L +++IN Q RV+ AY L M
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM-G 354
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVE 563
P ++ T++ L A R E A LL M ++N PP F +I G +E
Sbjct: 355 MYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIE 414
Query: 564 DASEFLKALSVKEYPSSAA---YLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLF 620
A + ++ + EY S Y + F +GR A +L P + +LL
Sbjct: 415 QAIKLIELM--PEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLT 472
Query: 621 GSAKSNKV 628
G + ++
Sbjct: 473 GLCHAERL 480
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 150/348 (43%), Gaps = 40/348 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY +L + + + NV++EM+ +G +I TY I + ++DA
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--------------------------- 353
++ + ++P + + +L+ + + D
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301
Query: 354 ---LGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G+V R + + G + + ++ + + A+ K GR D+A + M G PD
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+Y+ V+ GLC+AGR+E A +L EM C P+ T+ I C +++A+
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M E + L++GF Q RV+ A +E+ + P T+ TL+ L A
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSA----LELFNNLPCEPNTITYTTLLTGLCHA 477
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
RL+ A LL M +++ P F V + + G VE+A E + +
Sbjct: 478 ERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQM 525
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 199/496 (40%), Gaps = 27/496 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
++ +PS Y+++L + + L M+ C TY I+ G+ ++ +
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVD 239
Query: 181 SDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDK--IGKKLEDMKIELSD-NFVL 236
LN+ G +I + L + WDD + ++ D K ++ F +
Sbjct: 240 DAKEILNRLSSYGFQPDIV--SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 297
Query: 237 TVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
V R V +A+ + + +H G NT N ++ + + V D ++ + M
Sbjct: 298 LVRFFCRGGMVERAIQVLQQMSQH-GCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G D +Y + R + E A +L M+ P+ + + + G
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILC-----QKG 411
Query: 356 LVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
L+ + E + G S+ Y+ + GR D A ++ N EP+ ITY+
Sbjct: 412 LIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYT 468
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ GLC A R + A +L EM + C + T+ +L+ C V+ A+ +MME
Sbjct: 469 TLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEH 528
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLE 531
+ + L++G A +LL ++ K V L T+ ++++ L R E
Sbjct: 529 GCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD--TITYSSVVDVLSREDRTE 586
Query: 532 EAMNLLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVF 587
EA+ +L ++ P + + + T + F +S P+ + Y+ +
Sbjct: 587 EAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILI 646
Query: 588 ESFFNEGRHYEAKDLL 603
E +EG EA+ +L
Sbjct: 647 EGLAHEGLLKEARYVL 662
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 37/243 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NTITY +L L E + ++ EM ++ ++ T+ + F + +E+A++L
Sbjct: 463 NTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELV 522
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
MM+ P++ + F ++ DGI T
Sbjct: 523 NQMMEHGCTPNL-------------------ITF--------------NTLLDGI----T 545
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K +EA +++ + + G D ITYS V+ L + R E+A +L +++ G P +
Sbjct: 546 KDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVG 605
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ++ C E D+A+ FA M+ + +LI G + + A +L E+
Sbjct: 606 MYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSEL 665
Query: 505 IEK 507
K
Sbjct: 666 YAK 668
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY H+ ++ ++ L + ++V MK E + D + I R + + D
Sbjct: 45 NGYLHDQSSFGYMVSRLVSANKFKAAEDIVARMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++++F M D PS + +L + N L L F+ +G + + + +
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ--LNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 380 HRALTKL-GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL + G D K+ M G +PD+ TY +I GLC+ GR ++A + EM E
Sbjct: 163 IKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+T LI G C + VD A+ +M K + + L++G R A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L EM+ RP T+ TLI L ++++EA+ LL M Q P + + IS
Sbjct: 283 ELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 559 FGTV---EDASEFL 569
F V +A+ FL
Sbjct: 342 FCAVSKFREAANFL 355
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 113/493 (22%), Positives = 197/493 (39%), Gaps = 79/493 (16%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQ 147
S +T V+ ++R + D EK+ A F+ + + + + M+ LV+ + K
Sbjct: 11 SKNITPSQVIKLMRA-EKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKA 69
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
+ RMK ++C + E+ LSI + + D +L FH +K+ D K V
Sbjct: 70 AEDIVARMKIENCVVSEDILLSICRGYGRVHRPFD--SLRVFHK--MKDFDCDPSQKAYV 125
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
V + +E+ ++ L+ F ++E+ + P A
Sbjct: 126 TV---------LAILVEENQLNLAFKFYKN-MREIGLPPTVA------------------ 157
Query: 268 TYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+ N +++ L R++ D + EM K G + D TY + +F +++A KLF
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----------YESLGNSLSKS-- 374
M++ P+V + L+ + N D + + K Y SL + L K
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGR 277
Query: 375 ---------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
Y + L K + EA +++ M G +PD Y +
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI-------LIQGHCAANEVDRALLCF 466
VI G C +F +A N LDEM G P+ TW I +++G C N RA +
Sbjct: 338 VISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-TNYPSRAFTLY 396
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M + + + LD L+ + A +L+ E++ + P + T+K LI L
Sbjct: 397 LSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTDGCI-PNKGTWKLLIGHTLD 455
Query: 527 ARRLEEAMN-LLR 538
+ EA + LLR
Sbjct: 456 NTIVGEASDSLLR 468
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 153/376 (40%), Gaps = 38/376 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G H+ TY+ + R + V+ +M K GYE DI T + + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDLGLVFRVANK 363
V L + M++ YKP + L+ + N PDL V N
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 364 YESLGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G+ SL K +Y+ I L K D+A + M N G PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TYS +I LC GR+ DA +L +M E P++ T++ LI ++ A +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M++++ D D LINGF R++ A + MI K P T+ TLI+ A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIKGFCKA 411
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAY 583
+R+EE M L R M ++ + I F D F + +SV +P+ Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 584 LQVFESFFNEGRHYEA 599
+ + G+ +A
Sbjct: 472 NILLDGLCKNGKLAKA 487
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + + LL +++ +N +L V + + ++LG S Y
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL--VISLGEQMQTLGISHDLYTY 121
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A ++ M G+EPD +T S ++ G C + R DA ++D+M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M EK ++ + T+I+ L + +++A+NL M + P + I
Sbjct: 242 ALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 557 S---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS L + K P+ + + ++F EG+ EA+ L
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V S L++ + G+ +FR ++ +GN+++ Y +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YTTLIHGF 443
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ A V + ++ + PDI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A LL +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P T+ TLI L E + L++ M+ +
Sbjct: 564 MKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L+ + + D+A + M + P + +++++ + K +FE ++ ++M+ G D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T++I I C +++ AL AKMM+ Y+ D L L+NG+ KR++ A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
+M+E + +P TF TLI L + EA+ L+ M ++ P + V + K
Sbjct: 178 QMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 560 GTVEDASEFLKAL 572
G ++ A LK +
Sbjct: 237 GDIDLALSLLKKM 249
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ +++ + + V + + EM + G + TY + F + R ++A +F
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P++ ++LL + N L V +E L S + Y+ +
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLC--KNGKLAKAMVV---FEYLQRSTMEPDIYTYNIMIE 511
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ ++ + G P+ I Y+ +I G C+ G E+A ++L +M+E+G +P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ T+ LI+ + + + +M + DA + ++ N
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD + ++ + + DT K+
Sbjct: 54 ASAVFAAILETKGTQRSDIYVFSGLITAYLELGFLRDAIDCYRLTREHKFCVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KEGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM E G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM L+P + T+ TLI+ L+ A ++M ++N
Sbjct: 292 LCKKGDLKQAHDLIDEM-SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLL 410
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ M++ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NKLFDEMLEKGLVPNSVTFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLV--TYNALI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ L + ++ ++++EM G + D TY
Sbjct: 281 DLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K D + R + N L V Y + L
Sbjct: 323 --LIDGCCKEGDLDTAFEHRKMMIQENIRLDDV-----------------AYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 148/333 (44%), Gaps = 20/333 (6%)
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG------- 296
++P+ AL FF+W+ G+ H +Y +L +L R+ +R NV M K
Sbjct: 81 LHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNGFLRAAENVRNSMIKSCVSSHEAR 140
Query: 297 ----------YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ + + +Y ++ +F ++++ LF+ M++ +P++ + ++ +
Sbjct: 141 FVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAH 200
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
I N + + G Y + K+ +A K+ + M G
Sbjct: 201 CKIGNVVVAKAYFCG--LMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLR 258
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ ++Y+ +I G C+ G+ ++A + +M+E+GC PD+ T+T+L+ C + AL F
Sbjct: 259 NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF 318
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M+E + + VLI+ F +++ ++L M+EK L F LI+
Sbjct: 319 EEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEK-GLVSSVVPFNALIDGYCK 377
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+E+A+ +L MK P + + I F
Sbjct: 378 RGMMEDAICVLDSMKLNKVCPNSRTYNELICGF 410
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 155/349 (44%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ ++ TY ++ + + D + V E M +EG + +Y + F + +++A
Sbjct: 220 GFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEA 279
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD--G 378
++LF M + P V ++L+ + + L F E + N + +VY
Sbjct: 280 LELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFF----EEMVENGIEPNVYTYTV 335
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K+G+ DE +M+ M G + ++ +I G CK G EDA VLD M+ N
Sbjct: 336 LIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNK 395
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+ +T+ LI G C +DRA+ KM E + + LI+G + V+ A+
Sbjct: 396 VCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAW 455
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L MI K P Q TF I+ L ++E+A + +K+++ + I
Sbjct: 456 RLHHLMI-KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDG 514
Query: 559 FGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E S+ F + L +P+S + + + EG+ +A L+
Sbjct: 515 YCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLV 563
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 140/657 (21%), Positives = 260/657 (39%), Gaps = 101/657 (15%)
Query: 25 TRPLFTRVTHFFHISSFTASNQSHTSQ-FHINTCQKIFFSTSPNS--------SLELILA 75
++PLFT + H NQ+ FH+ K F S SPNS ++L
Sbjct: 4 SKPLFTLLHH----------NQNQNQNLFHL--LLKPFSSLSPNSLQQDLPSQIFTILLQ 51
Query: 76 CDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLM 135
W L P LT + + + P A FF W+ + F + Y +
Sbjct: 52 PQWRKN--PSFNTLIPSLTPTHLSSLFNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPL 109
Query: 136 LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH----- 190
L LV L+ +R C E +L +L + + + + N+
Sbjct: 110 LFILVRNGFLRA-AENVRNSMIKSCVSSHEARF-VLNLLTHHEFSLSVTSYNRLFMVLSR 167
Query: 191 -------DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED-------MKIELS-DNFV 235
+ + K++ D V L+ + KIG + MK D+F
Sbjct: 168 FGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFT 227
Query: 236 LT--VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
T +L +I+ + + G N ++Y ++ + + + +MK
Sbjct: 228 YTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMK 287
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
++G D+ TY + F + +A+K FE M++ +P+V ++L+ + D
Sbjct: 288 EDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMD 347
Query: 354 LGLVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G+ E L L K + ++ + K G ++A ++ +MK P+
Sbjct: 348 EGM--------EMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPN 399
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA----- 462
+ TY+++I G C+ + A +L++M EN P++ T+ LI G C A VD A
Sbjct: 400 SRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHH 459
Query: 463 -------------------LLC-----------FAKMMEKNYDADADLLDVLINGFLSQK 492
LC F + EK+ +A+ L LI+G+ +
Sbjct: 460 LMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAE 519
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ + A+ L M+ + P TF L++ L ++E+AM+L+ +M K + P +
Sbjct: 520 KFSDAHLLFKRMLFE-GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578
Query: 553 ---VQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ I + + A+ FL + +S P+ Y +++ +GR EA++++ K
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVK 635
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 187/437 (42%), Gaps = 73/437 (16%)
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
+MKED C+ + TY ++ + K ++ AL +F + MV+ NV V +
Sbjct: 285 QMKEDGCFPDVPTYTVLVAAFCEVGKETE--AL-KFFEEMVENGIEPNVYTYTVLI---- 337
Query: 214 DWDDKIGKKLEDMKI---ELSDNFVLTVLKELRIYPVKAL--GFF-RWVGEHS-----GY 262
D+ K+GK E M++ L V +V+ P AL G+ R + E +
Sbjct: 338 DYFCKVGKMDEGMEMLSTMLEKGLVSSVV------PFNALIDGYCKRGMMEDAICVLDSM 391
Query: 263 KHNTI-----TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
K N + TYN ++ R +S+ ++ +M + ++ TY + K R++
Sbjct: 392 KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVV 451
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--- 374
+ A +L M+ + P + + + +G V + +ESL +++
Sbjct: 452 DSAWRLHHLMIKDGFVPDQRTFCAFIDCLCK-----MGKVEQAHQVFESLKEKHAEANEF 506
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV---- 430
+Y + K +F +A + K M G P++IT++ ++ GL K G+ EDA ++
Sbjct: 507 LYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVM 566
Query: 431 -------------------------------LDEMEENGCIPDIKTWTILIQGHCAANEV 459
LD+M +GC P++ T+T I+ +C +
Sbjct: 567 GKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRL 626
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
A K+ E+ D+ + DVL+N + +++ A+ +L+ M + P + T+
Sbjct: 627 LEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFD-TGCEPSRQTYSI 685
Query: 520 LIEKLLGARRLEEAMNL 536
L++ L+ + +E M L
Sbjct: 686 LLKHLIFEKYNKEGMGL 702
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/446 (20%), Positives = 176/446 (39%), Gaps = 54/446 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K F P + + L ++Q +KE H E Y +++ KA+K S
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522
Query: 182 DLAAL----------------NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
D L N DG+ KE +++ A +LVDV+ D +
Sbjct: 523 DAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVED-AMSLVDVMGKFDAKPTV------ 575
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+ + + + LR F SG + N +TY ++ R + +
Sbjct: 576 ------HTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEA 629
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+V ++K+EG +D Y + + ++ A + M D +PS Q S+LL+
Sbjct: 630 EEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKH 689
Query: 346 I--SSINNPDLGL-------------VFRVAN---------KYESLGNSLSKSVYDGIHR 381
+ N +GL ++++A+ K G + + Y + +
Sbjct: 690 LIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIK 749
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K+ A ++ MK +G P ++ ++ CK G E+A +LD M E +
Sbjct: 750 GLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLA 809
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++++ +L+ G ++A F ++ Y+ D + VL++G + + V+ +L
Sbjct: 810 HLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLR 869
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGA 527
+++EK R T L ++L G
Sbjct: 870 -DIMEKTGCRLHSDTHTMLSQELNGT 894
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 154/369 (41%), Gaps = 11/369 (2%)
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
S LA+ H+ E MD V++ L + I ++ + +S V VL
Sbjct: 115 SILASCPASHEDAEFEADMDEVSRILRSRFASPE---AIVITMDCCPVRVSARLVSKVLS 171
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
V A GFF W G GY H +Y+ ++ +L + + ++ +M + G +
Sbjct: 172 RFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIGGLVS 231
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ T K+ R+ DA+ F M + ++LL ++ + V R
Sbjct: 232 LATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERS-----VKRA 286
Query: 361 ANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+++L ++ +S ++ + K EA + MK M+ GF P TY+ +I
Sbjct: 287 RGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAY 346
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C F+ +LDEM GC P+I T+TI++ A AL F K+ + DA
Sbjct: 347 CMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDA 406
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ LI R+ A +VE + + + P TF TLI E A+ LL
Sbjct: 407 SFYNCLIYILCRAGRLQDA-NFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLV 465
Query: 539 LMKKQNYPP 547
M++Q+ P
Sbjct: 466 QMEEQSCNP 474
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 102/494 (20%), Positives = 192/494 (38%), Gaps = 43/494 (8%)
Query: 98 VVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
V VL + ND A FF W ++ + + Y +M+ L + +M E
Sbjct: 166 VSKVLSRFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHE 225
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD 217
+ T ++ L A + SD A++ FH MD
Sbjct: 226 IGGLVSLATMTKVMRRLCGANRWSD--AIDAFHK-------MDRFG-------------- 262
Query: 218 KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA 277
+ K + M + L T+ KE + +A G F+ + + ++N ++
Sbjct: 263 -VAKDTKAMNVLLD-----TLCKERSVK--RARGAFQAL--KGTIPPDESSFNTLVHGWC 312
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+ +++ ++EM++ G+ + TY + + + + + + M P++
Sbjct: 313 KARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNII 372
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
++++ ++ L +K + G +L S Y+ + L + GR +A +++
Sbjct: 373 TYTIVMHALGKAGRTQEAL--DTFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVE 430
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M G P+ T++ +I C E+A +L +MEE C PDIKT+T L++ C
Sbjct: 431 EMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRK 490
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
V L M K+ D +L+ R+ + L EM+ K P QATF
Sbjct: 491 WVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQSCLFLEEMVLK-GFTPQQATF 549
Query: 518 KTLIEKLLGARRLEEA--MNLLRLMK-----KQNYPPFPEPFVQYISKFGTVEDASEFLK 570
++EKL L + LLR+ + P + + + + SE
Sbjct: 550 DLVLEKLKNMHMLSAVRKIQLLRMHTEGTRCRSGVPSYLREDGHDRHCYAVLSNTSEAES 609
Query: 571 ALSVKEYPSSAAYL 584
++ KE P + L
Sbjct: 610 SIDGKEVPRAVHIL 623
>gi|414868428|tpg|DAA46985.1| TPA: hypothetical protein ZEAMMB73_842284 [Zea mays]
Length = 683
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 109/481 (22%), Positives = 198/481 (41%), Gaps = 55/481 (11%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKK 179
++ RP+ Y++++ N +++ L RMKE E TY S++ G + +K
Sbjct: 242 ERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVHGAFRCLEK 301
Query: 180 ASDLAALNQF--HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
L+++ D + IA TL+ + +D D + +EL+
Sbjct: 302 ERAYRMLSEWIESDPTLHSIAY----HTLLYCLSKNDMDKE--------AVELAKKM--- 346
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
GY + T++ ++ + D +V++ K+G
Sbjct: 347 --------------------SKRGYLLGSTTFSIVIPCAVKVLESSDLCELVDDFIKKGG 386
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ D YI I + F + + + A K F M+ SV+ ++++ + + L
Sbjct: 387 NLGFDMYIMIIKSFLRCKDISKANKYFSQMVSDGLLSSVESYNIVIDCFAKAGEVERAL- 445
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ G S + ++ + KLG +A+ +K + G PD IT++ +I G
Sbjct: 446 -ETIKVMQESGFSPNLVTFNTLINGYLKLGNVHDAKAFLKMVMEHGLMPDVITFTSLIDG 504
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LC + +DA N EM E G P+++T+ +LI G C+A V +A+ KM D
Sbjct: 505 LCHTHQLDDAFNCFSEMSEWGVRPNVQTYNVLIHGLCSAGHVSKAIELLNKMKMDGITPD 564
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A + I F +++ A KL +M + + P T+ LI+ L RR++EA ++
Sbjct: 565 AYSFNAPILSFCRMRKIEKAQKLFNDM-SRYGVSPDSYTYNALIKALCDERRVDEAKEII 623
Query: 538 RLM--------KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
M K+ Y P V ++K G +EF + +K Y +L F S
Sbjct: 624 LAMESISCIGTKQHTY----WPVVGALTKMGRFR-CNEF-GLVPLKTYSEQFGHLVCFFS 677
Query: 590 F 590
Sbjct: 678 I 678
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 87/181 (48%), Gaps = 5/181 (2%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S ++Y+ + A + G D A + M G PD TY+ ++ G+C+ G ++
Sbjct: 174 LGLRPSTAIYNAVIAASVRAGAVDAAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDE 233
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +ME G P++ T+T+L+ G C A+ V+ A+ +M EK A L++
Sbjct: 234 ALRLVKQMERAGIRPNVVTYTMLVDGFCNASRVEEAVCVLERMKEKGVSATEATYRSLVH 293
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRP--WQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
G AY++L E IE P + TL+ L +EA+ L + M K+
Sbjct: 294 GAFRCLEKERAYRMLSEWIES---DPTLHSIAYHTLLYCLSKNDMDKEAVELAKKMSKRG 350
Query: 545 Y 545
Y
Sbjct: 351 Y 351
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S G +S+ + + + +LG A ++ + G P Y+ VI +AG +
Sbjct: 138 SCGCEVSEELLCALVESWGRLGLAHYAHEVFVQVPRLGLRPSTAIYNAVIAASVRAGAVD 197
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +M +GC PD T+ L+ G C VD AL +M + +L+
Sbjct: 198 AAYLRFQQMPADGCRPDCFTYNTLVHGVCRRGIVDEALRLVKQMERAGIRPNVVTYTMLV 257
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+GF + RV A +L M EK + +AT+++L+ GA R E R++ +
Sbjct: 258 DGFCNASRVEEAVCVLERMKEK-GVSATEATYRSLVH---GAFRCLEKERAYRMLSE 310
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 224/495 (45%), Gaps = 24/495 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K++F+ V ML+ V + L +MKE + +TY S+L L+
Sbjct: 76 KRRFKDLRLVLDQMLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMW 135
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLG-SDWDDKI-------GKKLEDMKIELSDN 233
D+ N D + A + +VD + G S + D + GK+ + S N
Sbjct: 136 DV--YNDIKDSGTPQSA--RTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVV--SFN 189
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+++ +L + V A FF + ++ G +T +YN ++ L S+ + + +M+
Sbjct: 190 TIMSRYCKLGLADV-AKSFFCMMLKY-GILPDTYSYNILIHGLIVAGSMEEALELTNDME 247
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNP 352
K+G + D+ TY +++ F +M A ++ + M+ D KP + ++L+ + N
Sbjct: 248 KQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNI 307
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ L R+ S G L+ +Y + +L K G+ DEA +++ M+ +PD +TYS
Sbjct: 308 EEAL--RLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYS 365
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I GLCK G+ + A + EM N P+ + +++G C + A + F ++
Sbjct: 366 ILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMS 425
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
N D L +++I+G++ V A +L + +K + P TF +LI R++ E
Sbjct: 426 NLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKA-ITPSIVTFNSLIYGFCKNRKVVE 484
Query: 533 AMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFE 588
A LL +K P + ++ + G + E L +++K+ P+ Y V +
Sbjct: 485 ARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIK 544
Query: 589 SFFNEGRHYEAKDLL 603
+ + E+ LL
Sbjct: 545 GLCKQRKLEESVQLL 559
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 102/445 (22%), Positives = 178/445 (40%), Gaps = 69/445 (15%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE-------------------- 291
F+ G++H+ ++ + VLAR +D V+++
Sbjct: 49 FYHLSRNEFGFQHSRVSRFLVSHVLARKRRFKDLRLVLDQMLQEEVASRMVHDALFVLVK 108
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMED------------AVKLFEFMMDGPYKPS-VQD 338
MK++ I TY + + +M D + + ++DG S +D
Sbjct: 109 MKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRD 168
Query: 339 CSLLLR---------SISSINN-----PDLGLV------FRVANKYESLGNSLSKSVYDG 378
L LR S+ S N LGL F + KY L ++ S Y+
Sbjct: 169 AVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYS---YNI 225
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EEN 437
+ L G +EA ++ M+ G +PD +TY V G G A ++ +M +
Sbjct: 226 LIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDE 285
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ T+T+LI GHC ++ AL ++ + + L VL++ + +V+ A
Sbjct: 286 GLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEA 345
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF----- 552
+LL EM E L+P T+ LI L ++++A+ L + M FP F
Sbjct: 346 LQLLYEM-EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRI--FPNSFAHSGI 402
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIR 611
++ + + G + DA + +L + P Y + + + G EA L +
Sbjct: 403 LKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAI 462
Query: 612 QDSKI---SLLFGSAKSNKVTIPSR 633
S + SL++G K+ KV R
Sbjct: 463 TPSIVTFNSLIYGFCKNRKVVEARR 487
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 115/258 (44%), Gaps = 3/258 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ ++GIL+ L + D + + D+ Y + + K +E+AV+L+
Sbjct: 395 NSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLY 454
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + D PS+ + L+ N + R+ + G S Y + A
Sbjct: 455 KRLRDKAITPSIVTFNSLIYGFCK--NRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYC 512
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G ++ +++ M EP +TY+ VI GLCK + E++ +L++M G PD
Sbjct: 513 EEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQI 572
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ +IQ C A ++ +A M+ N + +VLI+G V A ++LV +
Sbjct: 573 TYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSL 632
Query: 505 IEKVRLRPWQATFKTLIE 522
++ + + + T+I+
Sbjct: 633 QDR-NINLTKVAYTTMIK 649
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 2/207 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TY +++ L + + + ++E+M+ +G D TY I + F K + M A +L
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL 594
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+ +P+ ++L+ + D+ RV + +L+K Y + +A
Sbjct: 595 DDMLIHNLEPTPATYNVLIDGLCRYG--DVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G A K+ M GFE YS VI LCK +A M +G PD +
Sbjct: 653 VKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQE 712
Query: 445 TWTILIQGHCAANEVDRALLCFAKMME 471
+ +++ A V A M++
Sbjct: 713 IFEMMLNAFHRAGHVHSVFELLAVMIK 739
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 160/354 (45%), Gaps = 10/354 (2%)
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
M+ +S N +L L +++ Y + ++ + +G N T N ++ L VR+
Sbjct: 88 MRSIISFNLLLGALAKIKHYS-QVFSLYKKM-HLAGLSPNFFTLNILINCLCNVNRVREG 145
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ + + + GY D+ TY + + + +A +LF M P+V L++
Sbjct: 146 LSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKG 205
Query: 346 ISSINNPDLGLVFR--VANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKN 401
+ N +L L + N + ++ Y+ I L K+G++ EA+++ M +
Sbjct: 206 LCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVD 265
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G PD +T+S +I LCK G +A L+ M G +PD+ T+T LI+G C ++D
Sbjct: 266 QGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDS 325
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
A F M K Y+ D VLI G+ V A KL EM+ +V P TF L+
Sbjct: 326 AKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEML-RVGKWPDMKTFCVLL 384
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL 572
+ L A ++ +A L ++K P F+ + K G + +A E L
Sbjct: 385 KGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNEL 438
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 126/259 (48%), Gaps = 11/259 (4%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M +GYE D+ +Y + + K +E+A+KL+ M+ P ++ +LL+ +
Sbjct: 333 MPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGK 392
Query: 352 -PDLGLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
D +F V + N SV+ DG L K G EA ++ +K+ + D
Sbjct: 393 VGDAKKLFGVVKPHAVPKNLYICSVFLDG----LCKNGCLFEAMELFNELKSYNMKLDIE 448
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+++ +I GLCKA + E A + +++ + G PD+ T+ I+I G C +VD A + F M
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 508
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGA- 527
E + L++GF ++ KLL +MI+K V L A+ T++E ++
Sbjct: 509 EENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSL---AASIYTIVEDMVSKD 565
Query: 528 RRLEEAMNLLRLMKKQNYP 546
+ E +++L+ Q +P
Sbjct: 566 EKCREWLDILQRFPVQKHP 584
Score = 38.9 bits (89), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 2/118 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
++N ++ L + + W + E++ +EG + D+ TY + F K +++A LF+ M
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMM 508
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ P++ S LL N L V ++ +K SL+ S+Y + ++K
Sbjct: 509 EENGCTPNLLTYSALLHGFYK--NNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSK 564
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 126/286 (44%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + IT+N ++ R + V D ++ EM + G + TY + F + + A
Sbjct: 388 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 447
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK------- 373
L + M+ P+V C+ LL + L A + + S+
Sbjct: 448 QDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEP 507
Query: 374 --SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A +
Sbjct: 508 DVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMF 567
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M PD+ T+ LI G+C A VD L F +M ++ ADA LI GF
Sbjct: 568 DSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKV 627
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
++GA + EMI + P T + ++ L LE A+ +L
Sbjct: 628 DNIDGALDIFQEMISS-GVYPDTITIRNMLTGLWSKEELERAVAML 672
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 143/362 (39%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + YN I+ L + D N+ EM+++ DI TY
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R I NPD+
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLE--------------RKI----NPDV------------ 323
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ + A K G+F EAE++ M P +TYS +I G CK R +
Sbjct: 324 -------VTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDA 376
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ GC PDI T+ LI G+C A VD + +M E A+ LI+
Sbjct: 377 AEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIH 436
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A LL EMI + P T TL++ L +L++A+ + + M+K
Sbjct: 437 GFCQVGDLNAAQDLLQEMISS-GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
+ F VE P Y + NEG+ EA++L +
Sbjct: 496 ------IDASRPFNGVE--------------PDVQTYNILICGLINEGKFLEAEELYEEM 535
Query: 607 PH 608
PH
Sbjct: 536 PH 537
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 131/302 (43%), Gaps = 10/302 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + ++DA+ LF +M+ PSV D L+ + + PD+ V + K
Sbjct: 50 LKLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDV--VISLHKKM 107
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E L + + + + + A + GF P +T++ ++ GLC R
Sbjct: 108 EMLRMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRI 167
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A ++ +M C P++ T+T L+ G C V A+ +M+E + +
Sbjct: 168 SEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 223
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E + P + T+I+ L R +A NL M+++
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKE 283
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P + I+ F G DA + L+ L K P + + +F EG+ +EA+
Sbjct: 284 IFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAE 343
Query: 601 DL 602
+L
Sbjct: 344 EL 345
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 116/259 (44%), Gaps = 19/259 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G NTITY ++ + + ++++EM G ++ T + ++D
Sbjct: 422 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKD 481
Query: 320 AVKLFEFM----MD----GPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
A+++F+ M MD P+ +P VQ ++L+ + IN G YE +
Sbjct: 482 ALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGL--INE---GKFLEAEELYEEMP 536
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G Y + L K R DEA +M +M + F PD +T++ +I G CKAG +
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVD 596
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D + EM + G + D T+ LI G + +D AL F +M+ D + ++
Sbjct: 597 DGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNML 656
Query: 486 NGFLSQKRVNGAYKLLVEM 504
G S++ + A +L ++
Sbjct: 657 TGLWSKEELERAVAMLEDL 675
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 114/289 (39%), Gaps = 47/289 (16%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-------------------- 421
L + GR EA ++ M G +P+ ITY ++ G+CK
Sbjct: 191 GLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHII 250
Query: 422 ----------------GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
GR DA N+ EM+E PDI T+ +I G C + A
Sbjct: 251 PNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQL 310
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M+E+ + D LIN F+ + + A +L EM+ + + P T+ ++I+
Sbjct: 311 LQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPR-SIIPSTVTYSSMIDGFC 369
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG---TVEDASEFLKALS-VKEYPSSA 581
RL+ A ++ L + P F I+ + V+D + L ++ ++
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAK 624
Y + F G A+DLL + CP+ + ++ + L + K
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGK 478
>gi|15238810|ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 47/390 (12%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L +++ ++ FV VL+ +L FF W + Y ++ Y + + LA H+
Sbjct: 66 RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHK 125
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
W ++++MK ++ +T I Q+ K ++ AV+LF +
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP------------ 173
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
++LG + VY+ + AL + F A +++ M
Sbjct: 174 ------------------------KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI 209
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +PD TY+ ++ G C AG+ ++A LDEM G P + +LI+G A ++
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE---KVRLRPWQATF 517
A +KM + + D ++LI +G + +EM K+ L T+
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISK----SGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSV 574
KTLI + +++EA LL + + PFP P ++ + + G +DA F + V
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 575 KEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
K +P + Y + G+ +A + L
Sbjct: 386 KAHPPNRPVYTMLITMCGRGGKFVDAANYL 415
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 151/369 (40%), Gaps = 35/369 (9%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E L L +T E V VLR + FFNW + P+S Y + ++L +
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASH 124
Query: 143 DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNV 202
+ W L++MK+ I ET + ++++ K + + +G+ K +
Sbjct: 125 KKYESMWKILKQMKDLSLDISGET---LCFIIEQYGKNGHVDQAVELFNGVPKTLG---- 177
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+ VDV N +L L +++++ R + G
Sbjct: 178 CQQTVDVY----------------------NSLLHALCDVKMFHGAYALIRRMI--RKGL 213
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + TY ++ +++ ++EM + G+ + +E A +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHR 381
+ M G + P +Q ++L+ +IS + + ++ A K LG + Y +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK---LGLCVDIDTYKTLIP 330
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A++K+G+ DEA +++ G +P Y+ +I G+C+ G F+DA + +M+ P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390
Query: 442 DIKTWTILI 450
+ +T+LI
Sbjct: 391 NRPVYTMLI 399
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SGY+ N +T+N I+ + + + + + +GY D TY + K ++
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A+ L + M +P++ S L+ + + LGL ++ + G L Y+
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER----GILLDAVTYN 234
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +GR+ E +++ M +PD+ T++ +I LCK GR +A VL M +
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PDI T+ L++G+C+ V A F +M+++ + D +VLI+G+ K V+ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L E+ K L P A++ +LI+ L + R+ LL M PP
Sbjct: 355 MVLFKELCNK-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 46/321 (14%)
Query: 232 DNFVLTVL-----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
D++ +L KE RI ++A G + + G K + +TYN ++ E+V +
Sbjct: 264 DDYTFNILIDALCKEGRI--LEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ M K G E D+ Y + + K +M+++A+ LF+ + + P++
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--------- 371
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
Y SL + L S GR +K++ M + P
Sbjct: 372 ----------------SYNSLIDGLCNS------------GRISHVKKLLDEMHGSAQPP 403
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D +TY+ +I LCK GR +A VL M + G P+I T+ ++ G+C N V+ A F
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M++ + D +VLING+ + V+ A L EM K L P A++ +LI+ L
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCN 522
Query: 527 ARRLEEAMNLLRLMKKQNYPP 547
R+ LL M P
Sbjct: 523 LGRIPHVQELLDEMCDSGQSP 543
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 24/329 (7%)
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-KE 241
+A+ N DG+ + +V K L+D + GS + ++ N ++ L KE
Sbjct: 370 IASYNSLIDGLCNSGRISHVKK-LLDEMHGSAQPPDV----------VTYNILIDALCKE 418
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
RI ++ALG + + G K N +TYN ++ +V ++ M K G E DI
Sbjct: 419 GRI--LEALGVLVMMMK-KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
Y + + K M+++A+ LF+ M P + + L+ + +LG + V
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC-----NLGRIPHVQ 530
Query: 362 NKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ + G S Y+ + A K FD+A + + + G PD T ++ L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK + + A + L + +GC P+++T+TILI C A+L +KM + + DA
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+++I L + + A KL EMI +
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 12/284 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKLFEF 326
+YN ++ L + +++EM D+ TY I I ++ R++E A+ +
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE-ALGVLVM 430
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MM KP++ + ++ NN + + + N+ G Y+ + K
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNN--VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
DEA + K M++ PD +Y+ +I GLC GR +LDEM ++G PD+ T+
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Query: 447 TILIQGHCAANEVDRALLCFAKMME---KNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
IL+ C D+A+ F +++E ++ + ++D L G + + LL+
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P T+ LI L EAM LL M+ + PP
Sbjct: 609 -----GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 11/223 (4%)
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D+A M P + +++ + + G + A ++ +++ G P I T+TIL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I + + A A +++ Y + + +INGF +NG ++ + +
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC----INGMIFKALDFCQNLL 152
Query: 510 LRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
+ + Q T+ TLI L +++ A++LL+ M+K + P + + K G V
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 564 DASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDLLYK 605
DA + + A Y + + + GR E LL K
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTK 255
>gi|449487696|ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FF V + G N I Y+ ++ L + SV+ + ++EEM K G++ ++ T+ +
Sbjct: 884 RAVWFFHKVTKM-GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 942
Query: 308 SRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
K E A +LF + + YKP+V + ++ L + + +
Sbjct: 943 IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGY--CKEEKLSRAEMLFERMKE 1000
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + + Y + K G F +A ++M+ M N GF P+ TY+ ++ GLCK GR E+
Sbjct: 1001 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 1060
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L+ +N D T+TILI C ++++AL+ KM + + D L LI
Sbjct: 1061 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 1120
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F Q + + KL E+I K+ L P + T+ ++I +++ A+ + M
Sbjct: 1121 AFCRQNMMKDSEKLFDEVI-KLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 1179
Query: 547 P 547
P
Sbjct: 1180 P 1180
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 6/241 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L+ V + I ++ + A + M G PD+ TY +I G C+ G +A
Sbjct: 791 GLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPDSCTYKYIIVGYCRNGNVLEA 850
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ EM E G + D T T++I C + V+RA+ F K+ + + +I+G
Sbjct: 851 DRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWFFHKVTKMGLSPNLINYSSMISG 910
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYP 546
+ V A++LL EM+ K +P T +LI L E A L L+L++ NY
Sbjct: 911 LCKRGSVKQAFELLEEMV-KNGWKPNVYTHTSLIHGLCKKGWTERAFRLFLKLIRSDNYK 969
Query: 547 PFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P + IS + E S F + P++ Y + + G +A +L
Sbjct: 970 PNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNTNTYTTLIDGHCKAGNFSKAYEL 1029
Query: 603 L 603
+
Sbjct: 1030 M 1030
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
++G+ EA M+ M+N G +++I + E A NV DEM G PD
Sbjct: 771 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 830
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ +I G+C V A +MME+ + D L ++I F + VN A
Sbjct: 831 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV-WFF 889
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKF 559
+ K+ L P + ++I L +++A LL M K + P + + K
Sbjct: 890 HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 949
Query: 560 GTVEDASE-FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G E A FLK + Y P+ Y + + E + A+ L
Sbjct: 950 GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 995
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 157/347 (45%), Gaps = 9/347 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N +TYN I+ + + + MK +G E D TY K +
Sbjct: 243 ETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRL 302
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A L M++G P+ + L+ N DL + ++ S G S Y+
Sbjct: 303 EEASGLICKMLEGGLVPNAVTYNALIDGYC--NKGDLDKAYAYRDEMISKGIMASLVTYN 360
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
AL GR +A+ M+K M+ G PD +T++ +I G C+ G + A +LDEM
Sbjct: 361 LFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK 420
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T+T LI N + A F+K+ ++ D + + LI+G + ++ A
Sbjct: 421 GIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRA 480
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++LL EM + +++ P + T+ TL++ ++EEA LL MK++ P + IS
Sbjct: 481 FQLLKEM-DNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLIS 539
Query: 558 KF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFF--NEGRHYE 598
+ G ++DA + + P+ Y + + EG H E
Sbjct: 540 GYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAE 586
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 46/298 (15%)
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E+LG + Y+ I G+F A + + MK+ G EPD TY+ I GLCK GR
Sbjct: 243 ETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRL 302
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA--------------------LL 464
E+A ++ +M E G +P+ T+ LI G+C ++D+A L
Sbjct: 303 EEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLF 362
Query: 465 CFA---------------KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
A +M EK DA ++LING+ A+ LL EM+ K
Sbjct: 363 IHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGK-G 421
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDAS 566
++P T+ +LI L R++EA L ++++ P F I G ++ A
Sbjct: 422 IQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAF 481
Query: 567 EFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC------PHHIRQDSKIS 617
+ LK + ++K P Y + + + EG+ EA+ LL + P HI ++ IS
Sbjct: 482 QLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLIS 539
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 124/271 (45%), Gaps = 3/271 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN + L + D N+++EM+++G D T+ + + + + A
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRA 410
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ +P++ + L+ + N + + +K + G V++ +
Sbjct: 411 FGLLDEMVGKGIQPTLVTYTSLIYVLGKRNR--MKEADALFSKIQQEGLLPDIIVFNALI 468
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G D A +++K M N PD ITY+ ++ G C+ G+ E+A +LDEM+ G
Sbjct: 469 DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD ++ LI G+ ++ A +MM +D + LI G + A +L
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
L EM+ K + P +T+ ++IE + LE
Sbjct: 589 LKEMVSK-GITPDDSTYLSIIEAMETVDDLE 618
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 36/194 (18%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD--------------------------- 407
++D + RA +L + +EA + +K GF P+
Sbjct: 148 IFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEM 207
Query: 408 ---NI-----TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
NI T++ +I LCK G+ + A + ME G P++ T+ +I GHC +
Sbjct: 208 FRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKF 267
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
RA + F M +K + D + I+G + R+ A L+ +M+E L P T+
Sbjct: 268 QRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEG-GLVPNAVTYNA 326
Query: 520 LIEKLLGARRLEEA 533
LI+ L++A
Sbjct: 327 LIDGYCNKGDLDKA 340
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/190 (20%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ + ++ C+ + +A ++E G +P+I+T ++ N A + +A+
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M N + +++IN + ++ A + + M E + ++P T+ T+I
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHM-ETLGVKPNVVTYNTIIHGHCLRG 265
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYPSSAAYL 584
+ + A + + MK + P + +IS K G +E+AS + K L P++ Y
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325
Query: 585 QVFESFFNEG 594
+ + + N+G
Sbjct: 326 ALIDGYCNKG 335
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 8/171 (4%)
Query: 442 DIKT---WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
D KT + +L++ +C + + AL CF + EK + + + + +++ FL R A+
Sbjct: 142 DAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAW 201
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
L EM ++ +R TF +I L +L++A + M+ P + I
Sbjct: 202 VLYAEMF-RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHG 260
Query: 559 F---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G + A + + K P Y EGR EA L+ K
Sbjct: 261 HCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICK 311
>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 624
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 114/497 (22%), Positives = 215/497 (43%), Gaps = 31/497 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFW-VTLRRMKEDHCYIEEETYLSILGVL---KKAKKA 180
R S ++S +L+ L ++ + LRRM E C + +Y +L L K +++A
Sbjct: 130 LRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQA 189
Query: 181 SDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIE-------LSD 232
DL + H G +D VA T+++ +L DK L D ++ ++
Sbjct: 190 LDLLHIMADHKG---RCPLDVVAYTTVINGLLREGQLDK-AYSLFDAMLDRGPSPDVVTY 245
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ +++ L + + F R V +G + I Y ++ ++ + ++M
Sbjct: 246 SSIISALSKTQAMDKATQVFTRMV--KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKM 303
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+ G E D+ TY + K +A K+F+ ++ +KP LL ++
Sbjct: 304 CRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYAT---- 359
Query: 353 DLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
G + + + + + G L +++ I A K + DEA + M+ G PD +
Sbjct: 360 -EGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIV 418
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y V+ LC AGR +DA + + ++ G P+I +T LI G C ++ D+ +M
Sbjct: 419 NYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEM 478
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+++ D + ++ + RV A K L +++ ++ + P T+ TLI+ +
Sbjct: 479 IDRGICLDTIFFNAIMGNLCKKGRVIEA-KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGK 537
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQ 585
++EAM LL +M P + I+ + G +ED L+ + K P Y
Sbjct: 538 MDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEM 597
Query: 586 VFESFFNEGRHYEAKDL 602
+ + F GR AK+L
Sbjct: 598 LLQGLFQAGRTVAAKEL 614
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/320 (21%), Positives = 145/320 (45%), Gaps = 21/320 (6%)
Query: 253 FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVV-EEMKKEGYEMDIDTYIKISR 309
F VG +G + + I ++ +L+ L D ++V M + G + D+ +Y + +
Sbjct: 119 FATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLK 178
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYESL 367
+ + A+ L M D + C L + + +++ N L G + + + ++++
Sbjct: 179 GLCDDKTSQQALDLLHIMADHKGR-----CPLDVVAYTTVINGLLREGQLDKAYSLFDAM 233
Query: 368 ---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G S Y I AL+K D+A ++ M G PD I Y+ ++ G C +G+
Sbjct: 234 LDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKP 293
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A + +M +G PD+ T+T L+ C + A F ++++ + D+ L
Sbjct: 294 KEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTL 353
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G+ ++ + + LL M++K ++ F ++ +++EA+ + M++Q
Sbjct: 354 LHGYATEGALVEMHDLLDLMMKK-GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQG 412
Query: 545 YPPFPEPFVQYISKFGTVED 564
P I +GTV D
Sbjct: 413 LNP-------DIVNYGTVLD 425
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 139/333 (41%), Gaps = 19/333 (5%)
Query: 306 KISRQFQKFRMME--DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
K ++Q + R E DA ++F+ ++ + S+ D L R++S + + + N+
Sbjct: 30 KRTKQGGRQRATEPGDAHQVFDRLLKRGDRASIFD---LNRALSDVARASPAVAISLFNR 86
Query: 364 YESLGNSLSK---SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
G + + + Y + +LGR D A + + G I +S ++ GLC
Sbjct: 87 MPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCD 146
Query: 421 AGRFEDACN-VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
R DA + VL M E GC PD+ ++TIL++G C +AL M + D
Sbjct: 147 RRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLD 206
Query: 480 LL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
++ +ING L + +++ AY L M+++ P T+ ++I L + +++A +
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGP-SPDVVTYSSIISALSKTQAMDKATQVF 265
Query: 538 RLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
M K P + Y S E F K P Y + +
Sbjct: 266 TRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKN 325
Query: 594 GRHYEAK---DLLYKCPHHIRQDSKISLLFGSA 623
G+ EA+ D L K H + +LL G A
Sbjct: 326 GKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYA 358
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N I+ A+H V + V M+++G DI Y + ++DA+ F +
Sbjct: 385 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 444
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P++ + L+ + + + D V +A + G L ++ I L K GR
Sbjct: 445 SEGLAPNIVVFTTLIHGLCTCDKWDK--VEELAFEMIDRGICLDTIFFNAIMGNLCKKGR 502
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
EA+ + M G EP+ TY+ +I G C G+ ++A +L M NG P T+
Sbjct: 503 VIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNT 562
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I G+ ++ L +M K + ++L+ G R A +L + MI+
Sbjct: 563 IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 52/311 (16%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ +P ST Y +L + +L + L M + + + I+G K K
Sbjct: 340 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 399
Query: 182 D--LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-LSDNFVL-- 236
+ L N G+ +I N T++D++ + D + +K E L+ N V+
Sbjct: 400 EALLVFSNMRQQGLNPDIV--NYG-TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456
Query: 237 TVLKEL----RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
T++ L + V+ L F G +TI +N I+ L + V + N+ + M
Sbjct: 457 TLIHGLCTCDKWDKVEELAFEMI---DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 513
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+ G E + +TY + + M++A+KL M+ KP
Sbjct: 514 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP------------------ 555
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
S Y+ I ++ GR ++ +++ M G P +TY
Sbjct: 556 -------------------SDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 596
Query: 413 QVIFGLCKAGR 423
++ GL +AGR
Sbjct: 597 MLLQGLFQAGR 607
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 149/339 (43%), Gaps = 7/339 (2%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ +RD K+ + + DT K+ K + + +E +
Sbjct: 69 FSGLIIAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESL 128
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ Y S+ ++L+ S + ++ L V + G S ++ + KLG
Sbjct: 129 ECGYPASLYFFNILMHSF--VKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGD 186
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ AM+ +G +PD TYS +I GLCK + EDA + +EM +NG +P+ T+T
Sbjct: 187 LDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTT 246
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI GHC V A+ + +M+ ++ D + LI G + + A L+ EM K
Sbjct: 247 LIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK- 305
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
L+P + T+ TLI+ LE A + M K+N + IS G DA
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L+ LSV P Y + F +G + LL
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 105/245 (42%), Gaps = 4/245 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K MEDA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LFE M+D P+ + L+ N + L + + S S Y+ +
Sbjct: 226 NELFEEMLDNGLVPNGVTFTTLIDG--HCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENGC 439
L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +EN
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIR 343
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+ D+ +T LI G C A +M+ + ++IN F + V K
Sbjct: 344 LDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSK 402
Query: 500 LLVEM 504
LL EM
Sbjct: 403 LLKEM 407
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +P+ TY+ +I CK G +
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 431 LDEMEENGCIPDIKT 445
L EM+ +G +P + T
Sbjct: 404 LKEMQRDGYVPSVVT 418
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 36/347 (10%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ + + L +S+ V +LK ++A G F+W + Y+H+ +YN ++ +L
Sbjct: 181 ENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDIL 240
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE----------- 325
+ ++ R W +V+EM + ++T K+ R+ + ++A+ F
Sbjct: 241 GKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDT 300
Query: 326 ----FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+MD K SV+D + R + + F +A+ ++ +
Sbjct: 301 TAMNVLMDALVKEASVEDAHNVFRELKC------SIPFNLAS-------------FNVLI 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K + DEA K+M ++ +G EPD I+Y+ I C+ F + VL +ME GC
Sbjct: 342 HGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCK 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+TI++ A +++ AL + KM ++ D+ LI R+ K
Sbjct: 402 PNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDV-KE 460
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+VE +EK + P T+ TLI + E A+ LL M++ + P
Sbjct: 461 IVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 507
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 196/497 (39%), Gaps = 111/497 (22%)
Query: 83 ENKLEELSPK---LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
EN E L+ K +++ V +L++ ND +A F W D+ +R S Y+ M+ L
Sbjct: 181 ENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDIL 240
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ + W + M + ET ++ L +A + + A++ F + I+
Sbjct: 241 GKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQE--AIHAFRNIEKYGIST 298
Query: 200 DNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
D A L+D ++ ++ +E + N V +EL+ ++ F
Sbjct: 299 DTTAMNVLMDALV------------KEASVEDAHN----VFRELKC----SIPF------ 332
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
N ++N ++ + + + + W ++ E++K G E D+ +Y + +
Sbjct: 333 ------NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFR 386
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ K+ M KP+V + F +
Sbjct: 387 NVDKVLVQMEHKGCKPNV-------------------ITFTI------------------ 409
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I AL K + +EA K+ + MK G PD+ YS +IF L KAGR D ++++ME+ G
Sbjct: 410 IMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQG 469
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN--- 495
PD+ T+ LI CA ++ + AL KM E + D L+ F +KR+
Sbjct: 470 VTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLK 529
Query: 496 ---------------GAYKLLV-----------------EMIEKVRLRPWQATFKTLIEK 523
G Y +LV EM+ K + P +TFK L E+
Sbjct: 530 FLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA-MVPKDSTFKMLKEE 588
Query: 524 LLGARRLEEAMNLLRLM 540
L LEE + LM
Sbjct: 589 LERKSMLEEMKIIENLM 605
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 8/303 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A GFF WVG GY H +Y+ ++ +L + + W ++ +M + G M + T K
Sbjct: 206 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTK 265
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R+ +A+ F M + ++LL ++ + V R ++
Sbjct: 266 VMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERS-----VKRARGVFQE 320
Query: 367 LGNSLS--KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L ++ ++ ++ + K EA M+ MK GF P +TY+ ++ C F
Sbjct: 321 LRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF 380
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ +LDEM + C P++ T+TIL+ A AL F K+ E DA + L
Sbjct: 381 QTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSL 440
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I R+ AY ++ EM + P TF TLI + E A+ LL M++Q+
Sbjct: 441 IYILGRAGRLEDAYSVVEEM-RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 499
Query: 545 YPP 547
P
Sbjct: 500 CNP 502
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 102/462 (22%), Positives = 192/462 (41%), Gaps = 45/462 (9%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
++ S ++T V +L + ND A FF WV + + + Y LM+ L
Sbjct: 182 MDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQF 241
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMDN 201
W + +M E + T ++ L A + ++ A++ FH G+VK+ N
Sbjct: 242 DLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE--AIDAFHKMDRFGVVKDTKAMN 299
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
V L+D T+ KE + +A G F+ +
Sbjct: 300 V---LLD----------------------------TLCKERSVK--RARGVFQELRGTIP 326
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
N+ +N ++ + +++ + +EEMK+ G+ + TY + + + +
Sbjct: 327 PDENS--FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVY 384
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
L + M P+V ++L+ ++ L +K + G + S Y+ +
Sbjct: 385 ALLDEMRKRRCPPNVVTYTILMHALGKAGRTREAL--DTFDKLKEDGVAPDASFYNSLIY 442
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + GR ++A +++ M+ G P+ T++ +I C + E+A +L +MEE C P
Sbjct: 443 ILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNP 502
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DIKT+T L++ C V L M K+ D +L++ +V + L
Sbjct: 503 DIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFL 562
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
EM+ K P Q TF ++EK L R L+ +++++ Q
Sbjct: 563 EEMVSK-GFAPKQETFDLVMEK-LEKRNLQSVYKKIQVLRTQ 602
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 6/200 (3%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+Y ++ L K +F+ ++++M E G + + T T +++ A+ A+ F KM
Sbjct: 227 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 286
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
D ++VL++ ++ V A + E+ + + P + +F TL+ AR
Sbjct: 287 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARM 344
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS----VKEYPSSAAYLQ 585
L+EA++ + MK+ + P + + + +D L + P+ Y
Sbjct: 345 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 404
Query: 586 VFESFFNEGRHYEAKDLLYK 605
+ + GR EA D K
Sbjct: 405 LMHALGKAGRTREALDTFDK 424
>gi|255580313|ref|XP_002530985.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529437|gb|EEF31397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 753
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 172/403 (42%), Gaps = 43/403 (10%)
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ V T+ ++ W ++ + ++ + V VL R AL FFRWV
Sbjct: 77 EKVEDTISRMMANRPWTTRLQNSIRNLVPHFDHSLVYNVLHAAR-NSEHALQFFRWVERA 135
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+K++ T+ I+ +L R + ++ +M K+G E D ++ + + K ++++
Sbjct: 136 GLFKNDRDTHMKIIEILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKAGIVQE 195
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AVK+F NK LG S YD +
Sbjct: 196 AVKIF-------------------------------------NKMNELGVERSIKSYDAL 218
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + + GR+ A+++ M N G +P TY+ +++G + R E A D+M+ G
Sbjct: 219 FKVILRRGRYMMAKRVFNKMLNDGIQPTRHTYNIMLWGFFLSLRLETAMRFYDDMKNRGI 278
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ +I G +++ A F +M KN +I G+++ RV+ +
Sbjct: 279 SPDVVTYNTMINGFYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGLR 338
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYIS- 557
LL EM + ++P T+ TL+ L A ++ EA ++L M ++ P F++ +S
Sbjct: 339 LLEEM-KSFNIKPNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSC 397
Query: 558 --KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
K G + A + L + P+ A + V F + Y+
Sbjct: 398 QCKAGDLRAAEDVLNTMMRLHIPTEAGHYGVLIENFCKAEEYD 440
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 118/538 (21%), Positives = 210/538 (39%), Gaps = 64/538 (11%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + L P H S+VY + + E A FF WV F+ + ++
Sbjct: 92 WTTRLQNSIRNLVPHFDH-SLVYNVLHAARNSEHALQFFRWVERAGLFKNDRDTHMKIIE 150
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L L M + +E ++ ++ KA G+V+E
Sbjct: 151 ILGRASKLNHARCILLDMPKKGVEWDEYMFVVLIESYGKA--------------GIVQEA 196
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS----DNFVLTVLKELRIYPVKALGFF 253
KI K+ ++ +E S D +L+ R K + F
Sbjct: 197 V-------------------KIFNKMNELGVERSIKSYDALFKVILRRGRYMMAKRV-FN 236
Query: 254 RWVGEHSGYKHNTITYNGILR---VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ + + G + TYN +L + R E+ F+ ++MK G D+ TY +
Sbjct: 237 KMLND--GIQPTRHTYNIMLWGFFLSLRLETAMRFY---DDMKNRGISPDVVTYNTMING 291
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F +F+ ME+A KLF M P+V + +++ +++ D GL R+ + +S
Sbjct: 292 FYRFKKMEEAEKLFVEMKGKNIAPTVISYTTMIKGYVAVDRVDDGL--RLLEEMKSFNIK 349
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP-DNITYSQVIFGLCKAGRFEDACN 429
+ Y + L + EA+ ++ M P DN + +++ CKAG A +
Sbjct: 350 PNVHTYSTLLPGLCDAWKMTEAKDILIEMVARHLAPKDNSIFLRLLSCQCKAGDLRAAED 409
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK--------NYDADADLL 481
VL+ M + + +LI+ C A E DRA+ K++EK + +++
Sbjct: 410 VLNTMMRLHIPTEAGHYGVLIENFCKAEEYDRAVKYLDKLIEKEIILRPQSTLEIESNAY 469
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ +I S + A ++++K P F LI + A + ++M
Sbjct: 470 NPMIQYLCSHGQTGKAEIFFRQLMKKGVQDPL--AFNNLICGHAKEGYPDSAFEIFKIMG 527
Query: 542 KQNYPPFPEPFVQYISKF---GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGR 595
K+ P + + I + G DA L L P + + V ES F +GR
Sbjct: 528 KRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFEDGR 585
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 98/236 (41%), Gaps = 3/236 (1%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ + Y+ + + L G+ +AE + + G + D + ++ +I G K G + A +
Sbjct: 464 IESNAYNPMIQYLCSHGQTGKAEIFFRQLMKKGVQ-DPLAFNNLICGHAKEGYPDSAFEI 522
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
M + G D + ++I+ + E A M+E + D + ++
Sbjct: 523 FKIMGKRGVPRDADAYRLIIESYLRKGEPADAKTALDGMLEDGHVPDPSVFRSVMESLFE 582
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
RV A +++ M+EK ++ ++E LL +EEA+ + L+ + + +
Sbjct: 583 DGRVQTASRVMKSMVEK-GVKENMDLVGKILEALLMRGHVEEALGRIELLMQSGFHVNFD 641
Query: 551 PFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ +S+ G A + L AL +Y +V ++ G+ A +L K
Sbjct: 642 DLLSVLSEKGKTIAALKLLDFALERDFNLDFKSYDKVLDALLAAGKTLNAYSILCK 697
Score = 39.3 bits (90), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ SV+ + +L + GR A ++MK+M G + + +++ L G E+A
Sbjct: 565 GHVPDPSVFRSVMESLFEDGRVQTASRVMKSMVEKGVKENMDLVGKILEALLMRGHVEEA 624
Query: 428 CNVLDEMEENGCIPDIKTWTILI--QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ + ++G + ++ +G A LL FA +E++++ D D ++
Sbjct: 625 LGRIELLMQSGFHVNFDDLLSVLSEKGKTIAA---LKLLDFA--LERDFNLDFKSYDKVL 679
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ L+ + AY +L ++++K + W ++ K LI+ L ++A L R++K
Sbjct: 680 DALLAAGKTLNAYSILCKIMQKGGVSDWSSS-KDLIKSLNQEGNTKQADILSRMIK 734
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 159/360 (44%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ E +RD ++ + + DT K+
Sbjct: 50 ASAVFAAILETKGTQRSDIFVFSGLITAYLESEFLRDAIECYRLTREHKFWVPFDTCRKV 109
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ + D+ + V +
Sbjct: 110 LEHLMKLKYFKLVWGFYKXILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 167
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 168 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 227
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 228 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 287
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 288 LCKKGDLKQAHHLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIXL 346
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P+ Y + F +G ++ LL
Sbjct: 347 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKLL 406
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 168 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 227
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 228 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLI--TYNTLI 285
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 286 YGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIX 345
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ + ++IN F + V KL
Sbjct: 346 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXRTYTMIINEFCKKGDVWKGSKL 405
Query: 501 LVEM 504
L EM
Sbjct: 406 LKEM 409
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 129/348 (37%), Gaps = 72/348 (20%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D D A + F+ + K RPS Y+ ++ + L + + M +
Sbjct: 151 DGDIRVAQSVFDAI-TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 209
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLE 224
TY ++ L K K D L F + +VK + + V TL+D G + ++ +E
Sbjct: 210 TYSVLINGLCKESKMDDANEL--FDEMLVKGLVPNGVTFTTLID---GHCKNGRVDLAME 264
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
K LS + + + ITYN ++ L + ++
Sbjct: 265 IYKRMLSQSLL----------------------------PDLITYNTLIYGLCKKGDLKQ 296
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
++++EM +G + D TY ++DG K
Sbjct: 297 AHHLIDEMSMKGLKPDKITYTT--------------------LIDGCCKEG--------- 327
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
DL F + L Y + L + GR +AEKM++ M + G
Sbjct: 328 --------DLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 379
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+P+ TY+ +I CK G +L EM+ +G +P + T+ +L+ G
Sbjct: 380 KPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 159/367 (43%), Gaps = 21/367 (5%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDT 303
P +A+ F + E S K +TYN ++ L + ++ ++EEM ++G + DI T
Sbjct: 113 PDQAVKLFENM-ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVT 171
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + F + + +A E M P V C++L+ I + D+ + +
Sbjct: 172 YNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGIC--KDGDVEEALEILDG 229
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G Y+ I AL G+ EA +++K M + PD +T++ ++ G CKAG
Sbjct: 230 MKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGM 286
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
A VL+EM +PD+ T+TIL+ G C +V A +++ + Y D
Sbjct: 287 LPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L++G + A+KL+ EM VR R + +L+ A + +A +L M
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEM--SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404
Query: 543 QNYPPFPEPFVQY------ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
N P P Y + K G++ A + L + Y P Y + + R
Sbjct: 405 INMVP---PLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANR 461
Query: 596 HYEAKDL 602
EA DL
Sbjct: 462 VREACDL 468
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 172/404 (42%), Gaps = 57/404 (14%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY- 304
P A+ FF W GE GYKH+ +YN +L +L + V +++ G ++ T+
Sbjct: 7 PDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFK 66
Query: 305 ---------------IKISRQFQKFRMMED-------------------AVKLFEFMMDG 330
++ R +F + D AVKLFE M
Sbjct: 67 ILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESS 126
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-----VYDGIHRALTK 385
KP + + ++ + N + + E + KS Y+ + A +
Sbjct: 127 RVKPEIVTYNTVISGLCKSGNLE-----KARELLEEMIRKGGKSAPDIVTYNTLINAFYR 181
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
R EA + MK AG PD +T + ++ G+CK G E+A +LD M+ G +PD+ T
Sbjct: 182 ASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVIT 241
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVE 503
+ +I C A +V A A+++ K DL+ + L++GF + A ++L E
Sbjct: 242 YNSIIHALCVAGKVVEA----AEIL-KTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEE 296
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFG 560
M + + P T+ L+ L +++ A LL + +Q Y P V + K G
Sbjct: 297 MCRE-NILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSG 355
Query: 561 TVEDASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLL 603
+E+A + +K +SV+ + Y + + G ++A+++L
Sbjct: 356 EIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREIL 399
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 134/293 (45%), Gaps = 23/293 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITY ++ L R V+ + ++EE+ ++GY D+ Y + K +E+A KL
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY---ESLGNSLSKSV------ 375
+ M SV+ C + SS+ + R N + E L +S ++
Sbjct: 365 KEM-------SVRGCRTGVVMYSSL----VSGYCRAGNVHKAREILAEMVSINMVPPLFT 413
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L K G +A ++ + G+ PD +TY+ +I GLCKA R +AC++ DEM
Sbjct: 414 YNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMA 473
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC P+ T ++ G C VD A +M K + + + LI+G R++
Sbjct: 474 SRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMD 533
Query: 496 GAYKLLVEM-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +L M + V L + ++ LI + R+ EAM + M + + P
Sbjct: 534 DACMVLDAMRGQGVALDDF--AYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 89/218 (40%), Gaps = 2/218 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + Y+ ++ R +V ++ EM + TY + K + A
Sbjct: 371 GCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKA 430
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L ++ Y P V + L+ + N + +A++ S G + +
Sbjct: 431 VSLISDLVARGYVPDVVTYNTLIDGLCKANR--VREACDLADEMASRGCFPNDVTLGSVV 488
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L ++GR D+A ++ M P+ + Y+ +I GLCK+ R +DAC VLD M G
Sbjct: 489 FGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVA 548
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
D + LI V A+ + +M+ + + D
Sbjct: 549 LDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDG 586
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECXRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFC--KEGEIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ AM+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A ++M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV Y + F +G + L+
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLM 404
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 110/248 (44%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +E
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKE 340
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDV-AYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWT 399
Query: 497 AYKLLVEM 504
KL+ EM
Sbjct: 400 GSKLMKEM 407
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K + + R I N L V Y + L +
Sbjct: 317 LIDGSCKEGDLETAFEYRKIMIKENIRLDDV-----------------AYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G + + TY+ +I CK G ++ EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 159/355 (44%), Gaps = 20/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + +N++ +M++ E + Y I K++ M+DA
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF+ M +P+V S L+ + + R ++ L + + + +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYG--------RWSDASRLLSDMIERKINPDVF 327
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +P +TYS +I G C R ++A + + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C PD+ T+ LI+G C V+ + F +M ++ + ++LI G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A ++ EM+ + P T+ TL++ L +LE+AM + +++ P +
Sbjct: 448 DMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G VED + LS+K P AY + F +G EA D L+K
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFK 560
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + S LL +I+ +N D+ V + + +
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV--VISLGEQMQ 108
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+LG + Y + + + A ++ M G+EP+ +T S ++ G C + R
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M G P+ T+ LI G N+ A+ +M+ K D V++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + + A+ LL +M E+ +L P + T+I+ L + +++A+NL + M+ +
Sbjct: 229 NGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P + + ++F EG+ EA+
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 602 L 602
L
Sbjct: 348 L 348
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 15/345 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ ++ R + V+ +M K GYE +I T + + + +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+AV L + M Y+P+ + L+ + N + L+ R+ K G
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK----GCQPDLVT 223
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G D A ++ M+ EP + Y+ +I GLCK +DA N+ EME
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P++ T++ LI C A + M+E+ + D LI+ F+ + ++
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE----- 550
A KL EM+++ + P T+ +LI RL+EA + M ++ FP+
Sbjct: 344 EAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC--FPDVVTYN 400
Query: 551 PFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
++ K+ VE+ E + +S + ++ Y + + F G
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T++ ++ + + + + +EM K + I TY + F +++A ++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G+ VFR ++ +GN+++ Y+ + + L
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT---YNILIQGL 441
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+++ K M + G P+ +TY+ ++ GLCK G+ E A V + ++ + P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K D + +I+GF + A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P + TLI L E + L++ M+ +
Sbjct: 562 MKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKL 323
+ +TYN +++ +++ V + V EM + G + TY I I FQ + A ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEI 453
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---YDGIH 380
F+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQRSKMEPTIYTYNIMI 508
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K G+ ++ + + G +PD + Y+ +I G C+ G E+A + EM+E+G +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + LI+ + + + +M + DA + ++ N
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 142/334 (42%), Gaps = 42/334 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N TYNG++ +L + V + V+ EM EG D Y + F K + A
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 377
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M R IS PD Y +
Sbjct: 378 YRLFDEMQK--------------RKIS----PDF-------------------ITYTAVI 400
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR EA+K+ M EPD +TY+ +I G CK G+ ++A ++ ++M + G
Sbjct: 401 CGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLT 460
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+T L G C EVD A +M K + + + L+NG ++ A KL
Sbjct: 461 PNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKL 520
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+ +M E P T+ TL++ +R + A LLR M + P F ++ F
Sbjct: 521 MKDM-EVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579
Query: 560 --GTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
G +ED + LK + K P++ Y + + +
Sbjct: 580 MSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQY 613
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 120/540 (22%), Positives = 215/540 (39%), Gaps = 76/540 (14%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S+ L L+ K + +++VL + ND +FF W C ++ PS ++ +
Sbjct: 78 SEPLRRVLKPYESKFRADHLIWVLMNIKNDYRLVLSFFEWACLRRD--PSLEARCIVAQI 135
Query: 139 LVNKDSLKQ-------FWVTLR---RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
LK FWV + H ++E+ Y SD +
Sbjct: 136 ATASKDLKMARKLIQDFWVNPNLDVGVSFGH-FVEQLIY-------TYKDWGSDPRVFDI 187
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
F +V E M + A+ L D +L + ++ + F+ + ++L +
Sbjct: 188 FFQVLV-EAGMLDEARKLFDKMLNYGLL---------ISVDSCNLFISHLSEDLDGIKI- 236
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F E G NT +YN I L + V + ++ +M+ G D+ +Y +
Sbjct: 237 ALKVFVEFPE-VGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVI 295
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ + ++ +KL E M KP NP
Sbjct: 296 NGYCQVGELQRVLKLIEEMQIKGLKP----------------NP---------------- 323
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+G+ L K G+ EAE++++ M + G PD + Y+ +I G CK G A
Sbjct: 324 -----YTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY 378
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ DEM++ PD T+T +I G C V A F +M+ K + D LI+G+
Sbjct: 379 RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGY 438
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ----N 544
+ ++ A+ L +M++ + L P T+ L + L ++ A LL M ++ N
Sbjct: 439 CKEGKMKEAFSLHNQMLQ-MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN 497
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ V + K G ++ A + +K + V + P + Y + +++ A +LL
Sbjct: 498 IYTY-NSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 139/294 (47%), Gaps = 6/294 (2%)
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
M+++A KLF+ M++ SV C+L + +S + + + +V ++ +G + +
Sbjct: 197 MLDEARKLFDKMLNYGLLISVDSCNLFISHLSE-DLDGIKIALKVFVEFPEVGVCWNTAS 255
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ I +L +LGR EA +++ M+ G PD I+YS VI G C+ G + +++EM+
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQ 315
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P+ T+ +I C +V A +M+ + D + LI+GF V+
Sbjct: 316 IKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
AY+L EM +K ++ P T+ +I L R+ EA L M + P +
Sbjct: 376 SAYRLFDEM-QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 556 ISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I + G +++A S + L + P+ Y + + G A +LL++
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 124/315 (39%), Gaps = 42/315 (13%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITY ++ L + V + + EM + E D TY + + K M++A L
Sbjct: 394 ITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQ 453
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ P++ + L + D L+ + K G L+ Y+ + L
Sbjct: 454 MLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK----GLELNIYTYNSLVNGLC 509
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQ------------------------------V 414
K G D+A K+MK M+ AGF PD +TY+ V
Sbjct: 510 KAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVV 569
Query: 415 IF-----GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
F G C +G ED +L M E G +P+ T+ LI+ +C N + + M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
K D + ++LI G + + A+ L +M+ K +++ LI+ ++
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGK-GFNLTVSSYNALIKGFYKRKK 688
Query: 530 LEEAMNLLRLMKKQN 544
EA L M+++
Sbjct: 689 FLEARELFEQMRREG 703
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 102/250 (40%), Gaps = 14/250 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TY + L + V ++ EM ++G E++I TY + K ++ A
Sbjct: 458 GLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQA 517
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
VKL + M + P + L+ + + +E L L + +
Sbjct: 518 VKLMKDMEVAGFHPDAVTYTTLMDAYCKSR--------EMVRAHELLRQMLDRELQPTVV 569
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + G ++ EK++K M G P+ TY+ +I C + M
Sbjct: 570 TFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGM 629
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G +PD T+ ILI+GHC A + A M+ K ++ + LI GF +K+
Sbjct: 630 CAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKF 689
Query: 495 NGAYKLLVEM 504
A +L +M
Sbjct: 690 LEARELFEQM 699
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 108/249 (43%), Gaps = 6/249 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ ++++M+ G+ D TY + + K R M A
Sbjct: 493 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRA 552
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRS--ISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+L M+D +P+V ++L+ +S + L+ + K G + + Y+
Sbjct: 553 HELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEK----GIMPNATTYNS 608
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + ++ + M G PD TY+ +I G CKA ++A + +M G
Sbjct: 609 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 668
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ ++ LI+G + A F +M + AD ++ ++ + + ++
Sbjct: 669 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 728
Query: 499 KLLVEMIEK 507
+L E IEK
Sbjct: 729 ELCDEAIEK 737
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 155/347 (44%), Gaps = 36/347 (10%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ + + L +S+ V +LK ++A G F+W + Y+H+ +YN ++ +L
Sbjct: 158 ENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDIL 217
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE----------- 325
+ ++ R W +V+EM + ++T K+ R+ + ++A+ F
Sbjct: 218 GKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQEAIHAFRNIEKYGISTDT 277
Query: 326 ----FMMDGPYK-PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+MD K SV+D + R + + F +A+ ++ +
Sbjct: 278 TAMNVLMDALVKEASVEDAHNVFRELKC------SIPFNLAS-------------FNVLI 318
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K + DEA K+M ++ +G EPD I+Y+ I C+ F + VL +ME GC
Sbjct: 319 HGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDKVLVQMEHKGCK 378
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+TI++ A +++ AL + KM ++ D+ LI R+ K
Sbjct: 379 PNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDV-KE 437
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+VE +EK + P T+ TLI + E A+ LL M++ + P
Sbjct: 438 IVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 484
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 113/497 (22%), Positives = 196/497 (39%), Gaps = 111/497 (22%)
Query: 83 ENKLEELSPK---LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
EN E L+ K +++ V +L++ ND +A F W D+ +R S Y+ M+ L
Sbjct: 158 ENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKDQIPYRHSPESYNSMVDIL 217
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ + W + M + ET ++ L +A + + A++ F + I+
Sbjct: 218 GKAKNFRLMWELVDEMNHLAGSVSLETMSKVIRRLARAGRHQE--AIHAFRNIEKYGIST 275
Query: 200 DNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
D A L+D ++ ++ +E + N V +EL+ ++ F
Sbjct: 276 DTTAMNVLMDALV------------KEASVEDAHN----VFRELKC----SIPF------ 309
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
N ++N ++ + + + + W ++ E++K G E D+ +Y + +
Sbjct: 310 ------NLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFR 363
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ K+ M KP+V + F +
Sbjct: 364 NVDKVLVQMEHKGCKPNV-------------------ITFTI------------------ 386
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I AL K + +EA K+ + MK G PD+ YS +IF L KAGR D ++++ME+ G
Sbjct: 387 IMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILGKAGRLTDVKEIVEDMEKQG 446
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN--- 495
PD+ T+ LI CA ++ + AL KM E + D L+ F +KR+
Sbjct: 447 VTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLKTYHPLLKMFCRKKRMKVLK 506
Query: 496 ---------------GAYKLLV-----------------EMIEKVRLRPWQATFKTLIEK 523
G Y +LV EM+ K + P +TFK L E+
Sbjct: 507 FLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEMLSKA-MVPKDSTFKMLKEE 565
Query: 524 LLGARRLEEAMNLLRLM 540
L LEE + LM
Sbjct: 566 LERKSMLEEMKIIENLM 582
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 184/427 (43%), Gaps = 41/427 (9%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ L ++ LS VL L+ +R P KAL FFRWV E G+ HN +Y ++
Sbjct: 171 WSHELQSSLAELAPSLSKTTVLQTLQLIRT-PAKALHFFRWV-EAKGFTHNEQSYFLMIE 228
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+L R ++ N V ++K+ +++K+F+ M + P
Sbjct: 229 ILGRSRNLNAARNFVFSIEKKSGG-------------------AESIKVFKTMKEIGVSP 269
Query: 335 SVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
SV + LL + + L + + Y G + ++ + R DE
Sbjct: 270 SVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTY---GVTPDTYTFNILIRGFCMNSMVDEG 326
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILI 450
K M +PD +TY+ ++ GLC+AG+ + A NV+ M + P++ T+T LI
Sbjct: 327 FWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLI 386
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
+G+C ++ AL A+M+ + + + LI G ++++ ++L M+
Sbjct: 387 RGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGF 446
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
P T TLI+ +LEEA ++ M + P + V+ + + G A E
Sbjct: 447 IPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEE 506
Query: 568 FLKALSVKEY--------PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--SKIS 617
F L+ KE P AAY +FE + G+ +A+ + + QD S +
Sbjct: 507 FFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKT 566
Query: 618 LLFGSAK 624
L+ G +
Sbjct: 567 LILGHCR 573
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 141/604 (23%), Positives = 250/604 (41%), Gaps = 109/604 (18%)
Query: 9 SSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNS 68
SSL+ +S LS SST PL + + H ISS ++ + N K T +
Sbjct: 104 SSLKRCSSHLSSNLSSTPPLNSLLIHTQFISSISSQQPIKITP---NEGLKAATKTKRSQ 160
Query: 69 SL-ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
++ LI WS EL++ L EL+P L+ +V+ L +L P KA FF WV + K F
Sbjct: 161 AMARLINTEPWSHELQSSLAELAPSLSKTTVLQTL-QLIRTPAKALHFFRWV-EAKGFTH 218
Query: 128 SSTVYSLMLRNLV---NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+ Y LM+ L N ++ + F ++ + I+ + +K+ + +
Sbjct: 219 NEQSYFLMIEILGRSRNLNAARNFVFSIEKKSGGAESIK------VFKTMKEIGVSPSVV 272
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
N ++K ++AK L D +L D G D + +L +R
Sbjct: 273 TFNSLLSIVLKR-GRTSMAKQLFDEML-----DTYGVT--------PDTYTFNIL--IRG 316
Query: 245 YPVKAL---GFFRWVGEHSGYK--HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ + ++ GF+ + E S +K + +TYN ++ L R V+ NVV+ M K+ +
Sbjct: 317 FCMNSMVDEGFW-FFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNL 375
Query: 300 --DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
++ TY + R + + M +A+ L M+ KP+ + L++ +
Sbjct: 376 SPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCE--------- 426
Query: 358 FRVANKYESLGNSLSKSVYDG-----------IHRALTKLGRFDEAEKMMKAMKNAGFEP 406
A K + + L V DG + +A +G+ +EA + + M +P
Sbjct: 427 ---AQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQP 483
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEEN-------GCIP------------------ 441
D+ TYS ++ LC+ G F A DE+ E GC P
Sbjct: 484 DSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKT 543
Query: 442 ----------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D ++ LI GHC + M+ +++ DA+ ++I
Sbjct: 544 KKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMI 603
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNL----LRLM 540
+G L + A+K L +M++ L P A F +++ L+ RR+ + ++L +RL+
Sbjct: 604 DGLLKKGDPVLAHKSLEKMLKSSHL-PTTAIFHSILAALVEKERRIRQNIDLSTHTVRLL 662
Query: 541 KKQN 544
K
Sbjct: 663 YKSG 666
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 124/575 (21%), Positives = 216/575 (37%), Gaps = 122/575 (21%)
Query: 7 VLSSLRLANSLLSIR-SSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTS 65
+L S +A L ++R + R + R F S H + I+T + FS+
Sbjct: 147 LLQSFAVAAHLAAVRDPGAARAILVRALRF-------PSPHRHFVEQFISTYKA--FSSD 197
Query: 66 PNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDND---------PEKASAFF 116
P S +L+L C S L +L + + ES VL +L D PEK + +
Sbjct: 198 P-VSFDLLLLCLPSAPLLLRLRQYGISPSPESCNAVLCRLPLDEAVQLFQELPEKNTCSY 256
Query: 117 N----WVCDKKQFR------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
N +C + + P Y +M+ L+ L M
Sbjct: 257 NILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCTLSELETAIKLLSEMAARGL 316
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV--------DVVLG 212
+ Y S++ +L + SD A+ D ++ + +D T V D+
Sbjct: 317 ELNPVAYTSVIALLCDEGQVSD--AVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAA 374
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+W D++ K+ G + +TY +
Sbjct: 375 RNWFDEMQKR--------------------------------------GLAADGVTYTAL 396
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ L R +++ V++EM+ +G ++D TY + + K M +A + M+
Sbjct: 397 INGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRV 456
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
P+V Y + L K G A
Sbjct: 457 TPNV-------------------------------------VTYTALSDGLCKQGDVCAA 479
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ M + G E + TY+ +I GLCKAG E A + +M+E G PD+ T+T +I
Sbjct: 480 NELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGA 539
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + E+DRA +M++K +VL+NGF RV G +LL M+EK + P
Sbjct: 540 LCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEK-NIHP 598
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ +L+++ + ++ + + M Q P
Sbjct: 599 NTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVP 633
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 144/348 (41%), Gaps = 20/348 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT +YN +L+ L ++D + +EM D+ TY + + +E A+KL
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMASPP---DVVTYGIMVHGYCTLSELETAIKLL 308
Query: 325 -EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E G V S++ D RV G L +V+ +
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSD---AVRVVEDMVMHGVVLDAAVFTTVMSGF 365
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G A M+ G D +TY+ +I GLC+AG ++A VL EME+ G D
Sbjct: 366 CRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDA 425
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T+LI G+C ++ A L KM++K + L +G Q V A +LL E
Sbjct: 426 VTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHE 485
Query: 504 MIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
M K + L + T+ +LI L A LE+AM + M + P Y + G +
Sbjct: 486 MCSKGLELNIF--TYNSLINGLCKAGNLEQAMRTMIDMDEAGLKP---DVYTYTTIIGAL 540
Query: 563 EDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E +A S+ + P+ Y + F GR K LL
Sbjct: 541 CQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLL 588
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 52/252 (20%), Positives = 103/252 (40%), Gaps = 14/252 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN ++ L + ++ + +M + G + D+ TY I + + ++ A
Sbjct: 490 GLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRA 549
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
L + M+D KP++ ++L+ + RV L L K++
Sbjct: 550 HSLLQEMLDKGIKPTIVTYNVLMNGFC--------MSGRVEGGKRLLEWMLEKNIHPNTT 601
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + + ++ K M + P+ TY+ +I G CKA ++A EM
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G ++ LI+ + A F KM ++ A+ D+ + I+ ++ +
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYIDLSFNEDNL 721
Query: 495 NGAYKLLVEMIE 506
L E++E
Sbjct: 722 ESTLALCDELVE 733
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 197/475 (41%), Gaps = 81/475 (17%)
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
+ +V+ W L + + FV+ VL+ L+ +A+ +FRW + H
Sbjct: 39 ICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTELPHC 97
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+YN +L V+AR + ++ EM G+ ++T I++ K + + + +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M ++P+ + L+ + S++N+ D+ L + + + LG + ++ + R K
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT--LFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 386 LGRFDEAEKMMKAMKNA-----------------------------------GFEPDNIT 410
GR D A ++ MK++ G +PD +T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA-------- 462
Y+ +I LCKA R ++A + + +E+N +P + +I G+ +A + D A
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 463 --------------LLCFAKM------------MEKNYDADADLLDVLINGFLSQKRVNG 496
L C KM M+K+ + ++LI+ +++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++L M +K L P T ++++L +++L+EA + M + P F I
Sbjct: 396 AFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 557 ---SKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGR----HYEAKDLL 603
K G V+DA + + K L +S Y + ++FFN GR H KD++
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 184/477 (38%), Gaps = 78/477 (16%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
PS Y+ +L L + + MK+D TY ++ +L +A K L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGK---LDTA 396
Query: 187 NQFHDGMVKEIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTVLKEL 242
+ D M K NV +VD + S D+ E+M K+ D L
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL--- 453
Query: 243 RIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ LG V + S + N+I Y +++ H D + ++M
Sbjct: 454 ----IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 294 KEGYEMDI---DTYIKI---SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI- 346
+ D+ +TY+ + + +K R M + +K F+ P + S+L+ +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV------PDARSYSILIHGLI 563
Query: 347 -SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ N L + + + G L Y+ + K G+ ++A ++++ MK GFE
Sbjct: 564 KAGFANETYELFYSMKEQ----GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 406 PDNITYSQVIFGLCK-----------------------------------AGRFEDACNV 430
P +TY VI GL K GR ++A +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L+E+ + G P++ TW L+ A E++ AL+CF M E + +LING
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ N A+ EM +K ++P ++ T+I L A + EA L K P
Sbjct: 740 VRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 35/431 (8%)
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLV 207
W ++ + +E TY S++GVL KA + + A+ F H + + T++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE--AVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 208 DVVLGSDWDDKIGKKLEDMKIE------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
+ D+ LE + + ++ N +LT L+++ +AL F + + +
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD-EALKVFEEMKKDAA 374
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
N TYN ++ +L R + + + + M+K G ++ T + + K + +++A
Sbjct: 375 --PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 322 KLFEFMMDGPYKPSVQD----CSLLLRSISSINNPDLGLVFRVANKY---ESLGNSLSKS 374
+FE M YK D CSL+ LG V RV + Y E + +S ++
Sbjct: 433 AMFEEM---DYKVCTPDEITFCSLI---------DGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 375 ---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
VY + + GR ++ K+ K M N PD + + + KAG E +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+E++ +PD ++++ILI G A + F M E+ D +++I+GF
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+VN AY+LL EM K P T+ ++I+ L RL+EA L K +
Sbjct: 601 GKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 552 FVQYISKFGTV 562
+ I FG V
Sbjct: 660 YSSLIDGFGKV 670
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 124/626 (19%), Positives = 241/626 (38%), Gaps = 70/626 (11%)
Query: 29 FTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELENKLEE 88
F R ++SS + + ++H + ++ + N ++ W EN L
Sbjct: 4 FARTKFCKNLSSLSDNGENHEKPYTFEGNRQ-----TVNDICNVLETGPWGPSAENTLSA 58
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ------------------------ 124
LS K E V+ VLR+L D +A +F W + +
Sbjct: 59 LSFKPQPEFVIGVLRRL-KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL 117
Query: 125 -----------FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
F PS M+ V + L++ + ++ M++ Y +++G
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL---EDMKIEL 230
+ + L Q ++E+ + ++ G + ++ L ++MK
Sbjct: 178 FSAVNHSDMMLTLFQ----QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 231 SDNFVLTVLKELRIYPVKALG-------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
D + VL + I +G FF + E +G K + +TY ++ VL + +
Sbjct: 234 LDADI--VLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + E ++K Y + + ++A L E PSV + +L
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ + D L K ++ N S Y+ + L + G+ D A ++ +M+ AG
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAPNL---STYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P+ T + ++ LCK+ + ++AC + +EM+ C PD T+ LI G VD A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ KM++ + ++ + LI F + R +K+ +MI + P T ++
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDC 526
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPS- 579
+ A E+ + +K + + P + + + K G + E S+KE
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF--YSMKEQGCV 584
Query: 580 --SAAYLQVFESFFNEGRHYEAKDLL 603
+ AY V + F G+ +A LL
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLL 610
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G +T YN ++ + V + ++EEMK +G+E + TY + K +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSK 373
++A LFE + +V S L+ G V R+ Y E + L+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDG--------FGKVGRIDEAYLILEELMQKGLTP 690
Query: 374 SVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++Y + + AL K +EA ++MK P+ +TY +I GLCK +F A
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P ++T +I G A + A F + D+ + +I G +
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 492 KRVNGAYKLLVE 503
R A+ L E
Sbjct: 811 NRAMDAFSLFEE 822
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 143/304 (47%), Gaps = 17/304 (5%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F + + + N +TY+ ++ + V + ++EEM++EG + D+ Y + F
Sbjct: 171 LFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAF 230
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+E +LF+ M+ P+V S L++ LG R E L +
Sbjct: 231 CGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQG--------LGRTGRWREASEMLKDMT 282
Query: 372 SKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
++ V Y + L K GR +A K++ M G EP +TY+ V+ GLCK R +
Sbjct: 283 ARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMD 342
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV-- 483
DA V++ M + G PD T+ L++G C A ++ A+ + ++ + + D+
Sbjct: 343 DAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNN 402
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI G + RV+ A ++ M+E + L+ T+ LIE L AR+L EA+ L + +
Sbjct: 403 LIQGLCKEGRVHDAARIHSSMVE-MGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461
Query: 544 NYPP 547
+ P
Sbjct: 462 GFSP 465
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 147/322 (45%), Gaps = 21/322 (6%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+K L GE G T+TYN ++ L + + + D + VVE M K+G + D TY
Sbjct: 310 IKVLDLMVQKGEEPG----TLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNT 365
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + + +A+ L++ ++ + KP V C+ L++ + G V A +
Sbjct: 366 LLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCK-----EGRVHDAARIH 420
Query: 365 ESL------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
S+ GN ++ Y+ + + EA K+ K +GF P+++TYS +I GL
Sbjct: 421 SSMVEMGLQGNIVT---YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGL 477
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK A + +M+++G P + + L+ C + +++A F +M N++ D
Sbjct: 478 CKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDV 537
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+++I+G L V A +LL EM + L P TF LI + L+EAM L
Sbjct: 538 VSFNIIIDGTLKAGDVKSAKELLSEMF-MMDLVPDAVTFSILINRFSKLGMLDEAMGLYE 596
Query: 539 LMKKQNYPPFPEPFVQYISKFG 560
M + P F + +G
Sbjct: 597 KMVSCGHVPGVVVFDSLLKGYG 618
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+K R + V ++ M+ P S L S + ++P F V + G
Sbjct: 51 NLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFA--FSVLSLMTKRGF 108
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA--GFEPDNITYSQVIFGLCKAGRFEDA 427
++ + + + + G+ D+A + MK PD +TY+ ++ G CKA R +A
Sbjct: 109 GVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEA 168
Query: 428 CNVLDEMEENG-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ + M++ G C P++ T+++LI +C + EV L +M + AD + LI+
Sbjct: 169 RVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLIS 228
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F + + +L EM+ + ++ P T+ L++ L R EA +L+ M +
Sbjct: 229 AFCGEGDIETGRELFDEMLRR-KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVR 287
Query: 547 PFPEPFV---QYISKFGTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEA 599
P + + K G DA + L + K E P + Y V E R +A
Sbjct: 288 PDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDA 344
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + T N +++ L + V D + M + G + +I TY + + R + +A+K
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALK 453
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L+++ ++ + P+ S+++ + + L + + K + G + Y+ + +
Sbjct: 454 LWKYAVESGFSPNSMTYSVMINGLCKMQM--LSVARGLFCKMKDSGIRPTVIDYNALMTS 511
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + ++A + + M+N D ++++ +I G KAG + A +L EM +PD
Sbjct: 512 LCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPD 571
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T++ILI +D A+ + KM+ + + D L+ G+ + LL
Sbjct: 572 AVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLH 631
Query: 503 EMIEK 507
+M +K
Sbjct: 632 QMADK 636
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 101/237 (42%), Gaps = 10/237 (4%)
Query: 261 GYKHNTITYN----GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G + N +TYN G L E+++ W E G+ + TY + K +M
Sbjct: 427 GLQGNIVTYNFLIEGYLAARKLIEALK-LWKYAVE---SGFSPNSMTYSVMINGLCKMQM 482
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A LF M D +P+V D + L+ S+ L + + ++ +++ +
Sbjct: 483 LSVARGLFCKMKDSGIRPTVIDYNALMTSLC--REDSLEQARSLFQEMRNVNHNVDVVSF 540
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I K G A++++ M PD +T+S +I K G ++A + ++M
Sbjct: 541 NIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVS 600
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
G +P + + L++G+ E ++ + +M +K+ D+ L ++ R
Sbjct: 601 CGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSR 657
>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 783
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 134/580 (23%), Positives = 237/580 (40%), Gaps = 110/580 (18%)
Query: 64 TSP-NSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK 122
T+P +S+E+ + D +E+ L+ +S ++ ++ VL++ D F W
Sbjct: 29 TNPIATSIEVSTIIETLDPMEDGLKVISSRIRSYTITSVLQE-QPDTRLGFRLFIWSLKS 87
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL----------- 171
R TV L++ L+ +++ + +W L+ +K I E + ++
Sbjct: 88 WHLR-CRTVQDLIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEK 146
Query: 172 -----GVLKKAKKASDLAALNQFHDGMVKE----IAMDNVAKTL-----VDVVLGSDWDD 217
G+++ DL A N +V++ +A+ + L DVV
Sbjct: 147 AVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIH 206
Query: 218 KIGK--KLEDMKI---ELSDNFVL-------TVLKEL----RIYPVKALGFFRWVGEHSG 261
+ K K +D + E++D +L VL L +I+ + L F + SG
Sbjct: 207 GLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRL-FSKM--RASG 263
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ ITYN +L + + D + +++ + K+G+ + + Y + + R E+A
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------ 375
++ M+ KP V ++++R +S RV LG + +
Sbjct: 324 MWYQKMLRENIKPDVMLYTIMIRGLSQEG--------RVTEALTLLGEMTERGLRPDTIC 375
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + + +G DEAE + + P+N TYS +I G+CK G A ++ EME
Sbjct: 376 YNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEME 435
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRA--------------------------------- 462
+ GC+P + T+ LI G C AN ++ A
Sbjct: 436 KLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQ 495
Query: 463 ----LLCFAKMMEKNYDADADLLD-----------VLINGFLSQKRVNGAYKLLVEMIEK 507
LC + M+ K Y L+D +LINGF +NGA+KL EM K
Sbjct: 496 VMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLK 555
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ P T+ TLI+ L A R E+A+ + M K+ P
Sbjct: 556 GHM-PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 173/408 (42%), Gaps = 41/408 (10%)
Query: 237 TVLKELRIYPVKALGF--FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
T+ L+ P LGF F W + + T+ + I+ L + + +W V++E+K
Sbjct: 63 TITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQ-DLIIGKLIKENAFELYWKVLQELKN 121
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR---------- 344
++ + + + + + M E AV+ F M D KP + +L+L
Sbjct: 122 SAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181
Query: 345 SISSIN-------NPDL---GLVFRVANKYESLGNSL-------------SKSVYDGIHR 381
+++ N NPD+ G++ K ++L ++ +Y +
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + + +A+++ M+ +G D ITY+ ++ G CK+G +DA +L + ++G I
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ + LI G A + A + + KM+ +N D L ++I G + RV A LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
EM E+ LRP + LI+ L+EA +L + K + P + + + K
Sbjct: 362 GEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCK 420
Query: 559 FGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G + A K + + PS + + R EA+ L Y+
Sbjct: 421 NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 22/324 (6%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+ +H + +N TY+ ++ + ++ + ++ +EM+K G + T+ + K
Sbjct: 399 ISKHDCFPNNH-TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457
Query: 316 MMEDAVKLFEFMMDGPYKPS-----------VQDCSLLLRSISSINNPDLGL-VFRVANK 363
+E+A LF + M+ KPS V D + L + + + L +++ +
Sbjct: 458 RLEEARLLF-YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G Y+ + K G + A K+ K M+ G PD++TY +I GL +AGR
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
EDA + ++M + GC+P+ T+ ++ C N + AL + K + + + + V
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRV 636
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ F + + A + L+EM K + L P+ L++ A+R EA + ++
Sbjct: 637 VAESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ----AKRDCEAFAIFSVL 691
Query: 541 KKQNYPPFPEPFVQYISKFGTVED 564
K V I + VE+
Sbjct: 692 KDFKMNISSASCVMLIGRLCMVEN 715
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 128/286 (44%), Gaps = 10/286 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + IT+N ++ R + V D ++ EM + G + TY + F + + A
Sbjct: 356 GCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAA 415
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANK--------YESLGNSL 371
L + M+ P+V C+ LL + L +F+ K + G
Sbjct: 416 QDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEP 475
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L G+F EAE++ + M + G PD ITY+ VI GLCK R ++A +
Sbjct: 476 DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMF 535
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M P++ T+T LI G+C A VD L F +M + A+A LI+GF
Sbjct: 536 DSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKV 595
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EM+ + P T + ++ L L+ A+ +L
Sbjct: 596 GNINGALDIFQEMMAS-GVYPDTITIRNMLTGLWSKEELKRAVAML 640
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 150/358 (41%), Gaps = 32/358 (8%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H K N +T+ ++ L R V + +++ M ++G + + TY I K
Sbjct: 172 HQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231
Query: 319 DAVKLFEFMMDGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--- 374
A+ L M + + KP+V L R+ G R + + L L +
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSG---RWSEAQQLLQEMLERKKIS 288
Query: 375 ----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y+ + A K G+F EAE++ M G P ITYS +I G CK R + A ++
Sbjct: 289 PDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHM 348
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
M GC PDI T+ LI G+C A VD + +M E A+ LI+GF
Sbjct: 349 FYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQ 408
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+N A LL EM+ + P T TL++ L +L++A+ + + M+K
Sbjct: 409 VGDLNAAQDLLQEMVSS-GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK-------- 459
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
SK DAS + P Y + NEG+ EA++L + PH
Sbjct: 460 ------SKMDI--DASHPFNGVE----PDVQTYNILISGLINEGKFLEAEELYEEMPH 505
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 116/259 (44%), Gaps = 19/259 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G NTITY ++ + + ++++EM G ++ T + ++D
Sbjct: 390 AGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKD 449
Query: 320 AVKLFEFM----MD----GPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
A+++F+ M MD P+ +P VQ ++L+ + IN G YE +
Sbjct: 450 ALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGL--INE---GKFLEAEELYEEMP 504
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G Y+ + L K R DEA +M +M + F P+ +T++ +I G CKAGR +
Sbjct: 505 HRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVD 564
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D + EM G + + T+ LI G ++ AL F +MM D + ++
Sbjct: 565 DGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNML 624
Query: 486 NGFLSQKRVNGAYKLLVEM 504
G S++ + A +L ++
Sbjct: 625 TGLWSKEELKRAVAMLEDL 643
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 128/310 (41%), Gaps = 16/310 (5%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + D+ V + K
Sbjct: 47 LKLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDV--VISLHRKM 104
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + + A + GF P +T+S ++ GLC R
Sbjct: 105 EMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRI 164
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A ++ +M C P++ T+T L+ G C V A+ +M+E + +
Sbjct: 165 SEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTI 220
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRP----WQATFKT-LIEKLLGARRLEEAMNLLR- 538
++G A LL +M E ++P W +T +I + R EA LL+
Sbjct: 221 VDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQE 280
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
+++++ P + I+ F G +A E + L PS+ Y + + F +
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340
Query: 595 RHYEAKDLLY 604
R A+ + Y
Sbjct: 341 RLDAAEHMFY 350
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 76/177 (42%), Gaps = 4/177 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 471 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDE 530
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A ++F+ M + P+V + L+ D GL +F + + N+++ Y
Sbjct: 531 ATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAIT---YIT 587
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ K+G + A + + M +G PD IT ++ GL + A +L++++
Sbjct: 588 LIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ + ++ L V +
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFC--KGGEIXLAQSVFDSITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + K+G DE ++ M+ +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
LF+ M+D P+ + L+ DL + ++R + L SL + Y+
Sbjct: 226 NALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR-----QMLSQSLLPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDVAYTALISXLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ +G +P++ T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYLPNVVT 418
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 151/344 (43%), Gaps = 13/344 (3%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
ITY ++ + + ++EEM G D+ TY I R K M+E A +L
Sbjct: 217 VITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELIT 276
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ +P V ++LLR+ + D G ++ + S G +K Y + +L +
Sbjct: 277 SLTSKGCEPDVISYNILLRAFLNQGKWDEG--EKLVAEMFSRGCEPNKVTYSILISSLCR 334
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR DEA ++K M PD +Y +I LCK GR + A ++D M NGC+PDI
Sbjct: 335 FGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVN 394
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ++ C ++AL F K+ + + +I+ S + A ++ MI
Sbjct: 395 YNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMI 454
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY------ISKF 559
K + P + T+ +LI L +EEA+ LL M++ + P + Y + K
Sbjct: 455 SK-GIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRP---TVISYNIVLLGLCKV 510
Query: 560 GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
++DA F + + P+ Y+ + E G EA +L
Sbjct: 511 RRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAMEL 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 48/406 (11%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEET 166
N E A+ N + + F P Y++M+ +L N+ L L ++ D+C T
Sbjct: 161 NQIEAATQVLNRM-KARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVIT 219
Query: 167 YLSIL------GVLKKAKKA----------SDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
Y ++ G + +A K D+ N GM KE ++ A+ + +
Sbjct: 220 YTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLT 279
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW------VGE--HSGY 262
D I S N +L L +W V E G
Sbjct: 280 SKGCEPDVI-----------SYNILLRAF----------LNQGKWDEGEKLVAEMFSRGC 318
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ N +TY+ ++ L R + + +V++ M ++ D +Y + K ++ A+
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ ++M+ P + + + +L ++ N + L + NK +G + S Y+ + A
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQAL--EIFNKLRGMGCPPNVSSYNTMISA 436
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L G A M+ AM + G +PD ITY+ +I LC+ G E+A +LD+ME++G P
Sbjct: 437 LWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPT 496
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ ++ I++ G C +D A+ FA+M+EK + +LI G
Sbjct: 497 VISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGI 542
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 127/283 (44%), Gaps = 12/283 (4%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--Y 376
+++ E +++ Y P V C+ L++ + N + + + E L + V Y
Sbjct: 96 ESLYFLECLVNKGYTPDVILCTKLIKGFFNFKN-----IEKASRVMEILESHTEPDVFAY 150
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K+ + + A +++ MK GF PD +TY+ +I LC + A VLD++
Sbjct: 151 NAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLL 210
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+ C+P + T+TILI+ ++ A+ +M+ + D + +I G + V
Sbjct: 211 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVER 270
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L+ + K P ++ L+ L + +E L+ M + P + I
Sbjct: 271 AAELITSLTSK-GCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILI 329
Query: 557 S---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
S +FG +++A LK + KE P + +Y + + EGR
Sbjct: 330 SSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 36 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 95
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K R + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 96 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 153
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 273
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +N A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 274 LCKKGDLNQAHGLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRL 332
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 333 DDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 392
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 271
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G ++A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 272 YGLCKKGDLNQAHGLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIR 331
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T +I G C A +M+ D ++IN F + V KL
Sbjct: 332 LDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 391
Query: 501 LVEM 504
L EM
Sbjct: 392 LKEM 395
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y I L + GR +AEKM++ M + G +PD TY+ +I CK G +
Sbjct: 332 LDDVAYTAIISGLCQEGRPVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 391
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ NG +P + T+ +L+ G
Sbjct: 392 LKEMQRNGHVPSVXTYNVLMNG 413
>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
Length = 808
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWN----VVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G + N+ITYN ++ S+ WN V ++M G +D K
Sbjct: 233 AGTRPNSITYNSLIH----GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 288
Query: 316 MMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+A +F+ M + GP KP + S +L ++ + L V + N + G + +K
Sbjct: 289 RTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 347
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V++ + A + G D+A + + M+N G PD +T++ VI LC+ GR +DA + + M
Sbjct: 348 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 407
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA-DLLDVLINGFLSQKR 493
+ G P + LIQG C E+ +A ++MM K+ +IN + R
Sbjct: 408 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 467
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
V K +++M+ + RP TF +L+E +EEA LL M P
Sbjct: 468 V-AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 526
Query: 551 PFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V K G ++DA + F L P+S Y + F R AK + ++
Sbjct: 527 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 582
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 20/353 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ AR + + E+M+ +G D T+ + + ++DA
Sbjct: 341 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 400
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ F M+D PS L++ N+ +L E + ++K +
Sbjct: 401 LHKFNHMVDIGVPPSEAVYGCLIQGCC--NHGEL------VKAKELISEMMNKDIPPPGV 452
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ I L K GR E + +M M G P+ +T++ ++ G C G E+A +LD
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G P+ + L+ G+C +D AL F M+ K + L ++++G +R
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+ EMIE T+ ++ L +EA LL + N F
Sbjct: 573 TTAAKKMFHEMIESGTTVSIH-TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 631
Query: 554 QYIS---KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
IS K G ++A E A+S P+ Y + + E + EA +L
Sbjct: 632 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 684
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 14/322 (4%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM ++G I I ++ K + M+ A + + M+D P + SL++ +
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D RV + G + Y+ + + G ++E+ ++ K M + G P
Sbjct: 219 AMDKA--ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 276
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL--CFAK 468
+ I L K GR +A + D M G PDI +++ ++ G+ A + A + F
Sbjct: 277 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 336
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K + + ++LIN + ++ A L+ E ++ + P TF T+I L
Sbjct: 337 MLTKGIAPNKHVFNILINAYARCGMMDKAM-LIFEDMQNKGMIPDTVTFATVISSLCRIG 395
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
RL++A++ M PP + +Q G + A E + + K+ P ++
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG--VK 453
Query: 586 VFESFFN----EGRHYEAKDLL 603
F S N EGR E KD++
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIM 475
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 YDGIHR---ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y +HR L +GR +KN G PD+ +YS +I+G K G + A +
Sbjct: 110 YRRVHRPDLGLAIVGRL---------LKN-GLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 158
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM E G +P I +I+ C E+D+A KM++ D ++I+G K
Sbjct: 159 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 218
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-- 550
++ A ++L +M+E RP T+ +LI + E++ + + M P +
Sbjct: 219 AMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 277
Query: 551 -PFVQYISKFGTVEDASEFLKALSVK 575
F+ + K G +A ++ +K
Sbjct: 278 NSFIHALFKHGRTNEAKCIFDSMVLK 303
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYDGIHRALTKLGRFDEA 392
P++ ++L+ ++ PDLGL LG + S S+ G K G D+A
Sbjct: 98 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG----FVKDGEVDKA 153
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ M G P + + +I LCK + A +++ +M ++G PD+ T++++I G
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + +D+A +M+E ++ + LI+G+ N + ++ +M + P
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCGVIP 272
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+ I L R EA + M + P + + + T D+
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 325
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 2/243 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + N +T+N ++ ++ + + +++ M G E + Y + + K ++
Sbjct: 480 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 539
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA+ +F M+ KP+ S++L + ++ ++ G ++S Y
Sbjct: 540 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK--KMFHEMIESGTTVSIHTYGV 597
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L + DEA +++ + + D IT++ VI + K GR ++A + D + G
Sbjct: 598 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 657
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+I+T++++I + A F + + + +D+ LL+ ++ L++ V A
Sbjct: 658 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 717
Query: 499 KLL 501
L
Sbjct: 718 NYL 720
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N Y ++ ++ + D V +M +G + Y I + R A
Sbjct: 517 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 576
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----LGLVFRVANKYESLGNSLSKSV 375
K+F M++ S+ ++L + N D L +F + K++ +
Sbjct: 577 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII-------T 629
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ K+GR EA+++ A+ G P+ TYS +I L K +E+A N+ +E
Sbjct: 630 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 689
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
++G D + +++ EV +A + + E N +A + +L + F + +
Sbjct: 690 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749
Query: 496 GAY 498
G +
Sbjct: 750 GLF 752
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 123/513 (23%), Positives = 215/513 (41%), Gaps = 56/513 (10%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
+ P + ++V L+N + A F N V K P + Y+ +L L K L
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLN-VMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262
Query: 149 WVTLRRMKEDHCYIEEETYLSI------LGVLKKAKKASDLAALNQF------------- 189
L MK TY + +G LK+A +L N
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 190 --HDGMVKEI-----AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
++G ++E M+N+ K L DVV ++ I LE KI S+ F L L+E+
Sbjct: 323 LCNEGRIEEAFKLRDEMENL-KLLPDVV---SYNTLINGCLEWSKI--SEAFKL--LEEM 374
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
G K N +T+N +++ + + D N + +M++ G+ D
Sbjct: 375 ---------------SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY + + K M +A + + M K + +LR++ L +++ +
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR--EKKLEEAYKLLS 477
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
G + + Y + K G D A K+ MK P +TY+ +I GLC+ G
Sbjct: 478 SARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCG 537
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ E A + L+E+ E+G +PD T+ ++ G+C +V++A KM+E ++ D +
Sbjct: 538 KTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCN 597
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+L+ G + + A KL + K + T+ TLI L RL++A NLL M++
Sbjct: 598 ILLRGLCMEGVLEKALKLFNTWVSKGKAID-TVTYNTLITSLCKEGRLDDAFNLLSEMEE 656
Query: 543 QNYPPFPEPFVQYISKF---GTVEDASEFLKAL 572
+ P + I+ G + +A EF+ +
Sbjct: 657 KELGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 161/353 (45%), Gaps = 14/353 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A+ F +G+++ N +TYN IL L + + D +++ +MK G + +TY +
Sbjct: 227 AVEFLNVMGKYNCSPDN-VTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++A + E M P V ++L+ + N + F++ ++ E+L
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC--NEGRIEEAFKLRDEMENLK 343
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+ + + + EA K+++ M G +P+ +T++ ++ CK G+ +DA
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N + +MEE+G PD T+ LI G+C A + A +M KN D+ L+ ++
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+K++ AYKLL R R + + ++ TLI ++ A+ L MK++
Sbjct: 464 CREKKLEEAYKLL----SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
Query: 546 PPFPEPF---VQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEG 594
P + + + + G E A S+ + L P Y + + EG
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG 572
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
T+TYN I+ L + + + E+ + G D TY I + + +E A +
Sbjct: 523 TVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHN 582
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M++ +KP V C++LLR + L ++ N + S G ++ Y+ + +L K
Sbjct: 583 KMVENSFKPDVFTCNILLRGLCM--EGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCK 640
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
GR D+A ++ M+ PD+ TY+ +I L +GR +A + +M E G +PD
Sbjct: 641 EGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD 697
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 403 GFEPDNITYSQVIFGLC-----------------------------------KAGRFEDA 427
G P+ T++ VI+G C K GR DA
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDA 262
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++L +M+ G +P+ T+ IL+ G+C + A M + N D ++LING
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ R+ A+KL EM E ++L P ++ TLI L ++ EA LL M ++ P
Sbjct: 323 LCNEGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 548 FP---EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
V++ K G ++DAS + + + P Y + + G EA
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 2/248 (0%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K +++T N ILR L R + + + + ++ +K GY +D +Y + + K ++ A+K
Sbjct: 450 KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALK 509
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L++ M + PS + ++ + + + ++ ES G ++ Y+ I
Sbjct: 510 LWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQA-ISKLNELLES-GLLPDETTYNTILHG 567
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ G ++A + M F+PD T + ++ GLC G E A + + G D
Sbjct: 568 YCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAID 627
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI C +D A ++M EK D + +I R+ A + +
Sbjct: 628 TVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMS 687
Query: 503 EMIEKVRL 510
+M+EK L
Sbjct: 688 KMLEKGNL 695
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 160/360 (44%), Gaps = 22/360 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRD----FWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G N +T+N +L L V D F +V E E E+ Y + K
Sbjct: 126 TGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEV---MYGTVMNGLSKRG 182
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
E + L M G KP V+ S+++ ++ N D + + N+ + +
Sbjct: 183 HTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI--NLLNEMKQKNIPPNIFT 240
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L KLG++++ + ++ M N P+ T+S +I GLCK G+ EDA V+ M
Sbjct: 241 YNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMI 300
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
E G PDI T++ ++ G+C +VDRA F + +K + +LING+ +K +
Sbjct: 301 EKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLA 360
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L E+ +K L+P T+ T++ L+ R+ +A + M + P P +
Sbjct: 361 KAMQLFGEISQK-GLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVG----PTPDICL 415
Query: 556 IS-------KFGTVEDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCP 607
S K+G VE+A L +E + + Y V R EA + K P
Sbjct: 416 HSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLP 475
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/440 (21%), Positives = 179/440 (40%), Gaps = 35/440 (7%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+N A F + +K P+ +Y ++ L + ++ LR M++ + +
Sbjct: 145 ENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVR 204
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
TY ++ L K + AA+N ++ E+ N+ + D K+G+ E
Sbjct: 205 TYSIVIDAL--CKDINLDAAIN-----LLNEMKQKNIPPNIFTYNSLIDGLCKLGQ-WEK 256
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+K LS+ + L I P N T++ ++ L + V D
Sbjct: 257 VKTLLSE------MVNLNINP------------------NVHTFSILIDGLCKEGKVEDA 292
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V+ M ++G E DI TY I + ++ A ++F + D KP++ S+L+
Sbjct: 293 DEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILING 352
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N L ++ + G Y I L ++GR +A+K+ M G
Sbjct: 353 YCKKKN--LAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPT 410
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +S ++FG K G E+A + ++E N +I +T++I G C + V A
Sbjct: 411 PDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAI 470
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F K+ D +V+I GF + + +L +M E T+ +++
Sbjct: 471 FEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKM-EDNGCPANNITYNVIMQGFF 529
Query: 526 GARRLEEAMNLLRLMKKQNY 545
+ ++ E ++ ++ M + +
Sbjct: 530 RSNKISEIVSFMKEMAGRGF 549
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 4/227 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +Y+ ++ + +++ + E+ ++G + D TY I + + DA
Sbjct: 338 GIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDA 397
Query: 321 VKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
K+F+ M+ GP +LL + L+F +K E + S Y +
Sbjct: 398 KKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLF---SKLERNREDTNISFYTVV 454
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K R EA + + + + G PD TY+ +I G C+ G F++ +L +ME+NGC
Sbjct: 455 INGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGC 514
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ T+ +++QG +N++ + +M + + DA VLIN
Sbjct: 515 PANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLIN 561
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 109/267 (40%), Gaps = 39/267 (14%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PSV D S L +++ IN V + + LG +S S+
Sbjct: 43 LDDAVSLFHRMVRMKPLPSVIDFSKLFKTM--INMKHYSAVVSLFREMRILGIPISDSIL 100
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGF-------------------------------- 404
+ + + R D A ++ G
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVR 160
Query: 405 ----EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
EP+ + Y V+ GL K G E ++L ME+ PD++T++I+I C +D
Sbjct: 161 EKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLD 220
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ +M +KN + + LI+G + LL EM+ + + P TF L
Sbjct: 221 AAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVN-LNINPNVHTFSIL 279
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ L ++E+A ++R M ++ P
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEP 306
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/233 (20%), Positives = 102/233 (43%), Gaps = 6/233 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + + + + + M+ G + + V C R + A +VL
Sbjct: 65 FSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVLPIYL 124
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM-EKNYDADADLLDVLINGFLSQKRV 494
+ G ++ T+ L+ G A N+V A++ F K++ EK + + + ++NG +
Sbjct: 125 KTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHT 184
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
LL ++E+ +P T+ +I+ L L+ A+NLL MK++N PP
Sbjct: 185 EKTLSLL-RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNS 243
Query: 552 FVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G E L + +++ P+ + + + EG+ +A +++
Sbjct: 244 LIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVM 296
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 185/430 (43%), Gaps = 26/430 (6%)
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
E + ++ +++ +++ DW++ + K + + V+ LK+ R P FF+W
Sbjct: 8 ETSNKHLIESVCAIIVKGDWNNLLKPKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKW 67
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK-----------------EGYE 298
Y H+ + ++ +L +H + V+++M + + E
Sbjct: 68 AQSIPHYTHSLHSSWSMIHMLTKHRHFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPE 127
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ I + K +M DAV++FE M KP + C++L+ S+ + + +V+
Sbjct: 128 VNSHVLSWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSL--LKDGITSMVW 185
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+V + G + VY+ + A +K + AE ++ M+ G PD TY+ +I
Sbjct: 186 KVYKRMVQDGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALY 245
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK G +A +V D+ME G DI ++ LI G C ++ A+ F ++ K+ +
Sbjct: 246 CKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREAMRMFGEI--KDAIPNH 303
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI+G+ A +L M+ K L P T+ +++ KL R+ +A LL
Sbjct: 304 VTYTTLIDGYCKANEFEEALRLREMMVAK-GLYPGVVTYNSILRKLCSDGRIRDANKLLH 362
Query: 539 LM---KKQNYPPFPEPFVQYISKFGTVEDASEF-LKALSVKEYPSSAAYLQVFESFFNEG 594
M K Q + K G + A +F K L P+S Y + F
Sbjct: 363 EMSERKVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTS 422
Query: 595 RHYEAKDLLY 604
AK+LL+
Sbjct: 423 ELESAKELLF 432
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 100/249 (40%), Gaps = 39/249 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + TYN ++ + + + +V ++M++EG +DI +Y + F K M
Sbjct: 227 EVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKM 286
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A+++F G K ++ + Y
Sbjct: 287 REAMRMF-----GEIKDAIPN----------------------------------HVTYT 307
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K F+EA ++ + M G P +TY+ ++ LC GR DA +L EM E
Sbjct: 308 TLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSER 367
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D T LI +C +++ AL KM+E ++ LI+GF + A
Sbjct: 368 KVQADSVTCNTLINAYCKIGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESA 427
Query: 498 YKLLVEMIE 506
+LL M++
Sbjct: 428 KELLFGMLD 436
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 105/539 (19%), Positives = 203/539 (37%), Gaps = 64/539 (11%)
Query: 3 RSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFH----ISSFTASNQSHTSQFHINTCQ 58
++ + L+S + +L ++ P F + HFF I +T S S S H+ T
Sbjct: 34 KTASTLTSTTIHQVILHLKQHRYEPFF--IFHFFKWAQSIPHYTHSLHSSWSMIHMLTKH 91
Query: 59 KIFFSTSPNSSLELILACDWSDELENKLEELSPK--LTHESVVYVLRKLDNDPEKASAFF 116
+ F + + L++++ + L+ SV+ L ++ +DPE S
Sbjct: 92 RHFKTA------------------QQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVL 133
Query: 117 NWVC----------DKKQ---------FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
+W+ D Q +P ++++ +L+ W +RM +
Sbjct: 134 SWIVIHYAKSKMTHDAVQVFEQMSLCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQ 193
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLA-ALNQFH-DGMVKEIAMDNVAKTLVDVVL--GS 213
D Y ++ K++ LN+ G+V +I N TL+ + G
Sbjct: 194 DGVVPNIYVYNCLIHACSKSRDVERAEFILNEMEVKGVVPDIFTYN---TLIALYCKKGL 250
Query: 214 DWD-----DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
++ DK+ ++ ++ I ++ + KE ++ R GE N +T
Sbjct: 251 HYEALSVQDKMEREGINLDIVSYNSLIYGFCKEGKMREA-----MRMFGEIKDAIPNHVT 305
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y ++ + + + E M +G + TY I R+ + DA KL M
Sbjct: 306 YTTLIDGYCKANEFEEALRLREMMVAKGLYPGVVTYNSILRKLCSDGRIRDANKLLHEMS 365
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ + C+ L+ + I + + L F+ K G + + Y + K
Sbjct: 366 ERKVQADSVTCNTLINAYCKIGDLNSALKFK--TKMLEAGLTPNSFTYKALIHGFCKTSE 423
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+ A++++ M +AGF P+ TYS ++ CK + + DE G +I +
Sbjct: 424 LESAKELLFGMLDAGFSPNYRTYSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRA 483
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI+ C ++ A M K D+ + L + N A +L EM +
Sbjct: 484 LIRRLCKIERIECAEKLLYHMEGKGISGDSVIYTSLAFSYWKSGNTNAASDMLEEMARR 542
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 93/221 (42%), Gaps = 37/221 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYIKIS----- 308
G +TYN ILR L +RD ++ EM + + D I+ Y KI
Sbjct: 333 GLYPGVVTYNSILRKLCSDGRIRDANKLLHEMSERKVQADSVTCNTLINAYCKIGDLNSA 392
Query: 309 -----------------------RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
F K +E A +L M+D + P+ + S ++ S
Sbjct: 393 LKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRTYSWIVDS 452
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+N D V + +++ S G L+ S+Y + R L K+ R + AEK++ M+ G
Sbjct: 453 YCKKDNTDA--VLALPDEFLSKGFCLNISLYRALIRRLCKIERIECAEKLLYHMEGKGIS 510
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
D++ Y+ + F K+G A ++L+EM + +K +
Sbjct: 511 GDSVIYTSLAFSYWKSGNTNAASDMLEEMARRRLMITVKIY 551
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 124/279 (44%), Gaps = 7/279 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + +TYN ++ L + +++ ++E MK G D+ Y K + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++ E M D + P+V + +L + D L + S G L+ Y +
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEM-MEQMASSDGCGLNVVGYSTV 299
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L KLGR EA +M+AM AG PD +TYS ++ GLCKAG+ E+A + EM GC
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD-----ADLLDVLINGFLSQKRV 494
P+ T+ L+ G C+ + A +M D + LI G R+
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRI 419
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ A K M + P ++ T++E L + R +A
Sbjct: 420 DDALKFFQRMRSQ-GCDPDGVSYSTIVEGLARSGRALQA 457
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 167/350 (47%), Gaps = 10/350 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMME 318
G + N ++YNG+L L + E + +V +M G D+ TY + + K +E
Sbjct: 40 GIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVE 99
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSI-NNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ +L + ++ +P D + + ++S+ + LG + + G + ++
Sbjct: 100 ESRELLKEVISRGLRP---DALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFN 156
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + A+ +++ M +G + D +TY+ ++ GLCKAGR ++A +L+ M+ +
Sbjct: 157 TLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKAS 216
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PD+ ++ + G C + +V A +M + ++D + + +++G +++ A
Sbjct: 217 GCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTA 276
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQ 554
+++ +M + T+++ L R +EA +++ M + P V
Sbjct: 277 LEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVN 336
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G +E+A E ++ ++++ P++ Y + + GR EA+ ++
Sbjct: 337 GLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 124/330 (37%), Gaps = 79/330 (23%)
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS-ILGVLKKAKKASDLAALNQF 189
Y+ ++ L L++ L RMK C + Y S + G+ K K + L Q
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 190 HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-KELRIYPVK 248
D SD D + ++ N +L L K +I
Sbjct: 249 RD---------------------SDHDPNV----------VTYNTILDGLCKSGKID--T 275
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL + G N + Y+ ++ L + ++ +V+E M + G D+ TY +
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335
Query: 309 RQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K +E+AV+ E M+G +V CSL
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSL-------------------------- 369
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI-----TYSQVIFGLCKAG 422
+H L GR EAE+M++ M + G D+ TY+ +I GLCKAG
Sbjct: 370 -----------VH-GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAG 417
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQG 452
R +DA M GC PD +++ +++G
Sbjct: 418 RIDDALKFFQRMRSQGCDPDGVSYSTIVEG 447
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 113/262 (43%), Gaps = 42/262 (16%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + +K GR + E++++ M G +P+ ++Y+ ++ GLCK R+ +A ++ +M
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71
Query: 435 EENG--CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL------------ 480
G PD+ T++ L+ G+C A +V+ + +++ + DA +
Sbjct: 72 ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131
Query: 481 -----------------------LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+ LI+G +K + A LL M ++ T+
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAAS-GVKADVVTY 190
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSV 574
TL++ L A RL+EA LL MK P FV + K G V +A + L+ +
Sbjct: 191 NTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRD 250
Query: 575 KEY-PSSAAYLQVFESFFNEGR 595
++ P+ Y + + G+
Sbjct: 251 SDHDPNVVTYNTILDGLCKSGK 272
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 105/241 (43%), Gaps = 14/241 (5%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P+++T++ ++ G K GR D +L+ M G P++ ++ L++G C
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 459 VDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
A M+ + + DL+ L++G+ +V + +LL E+I + LRP
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISR-GLRPDALM 119
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG---TVEDASEFLKALS 573
+ ++ L + RL EA+ LL M + P F IS +E A L+ ++
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179
Query: 574 VKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYK-----CPHHIRQDSKISLLFGSAKSNK 627
+ Y + + GR EA+ LL + C + S S ++G KS K
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS--SFVYGLCKSGK 237
Query: 628 V 628
V
Sbjct: 238 V 238
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + +TYN ++ L + +++ ++E MK G D+ Y K + D
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++ E M D + P+V + +L + D L + S G L+ Y +
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEM-MEQMASSDGCGLNVVGYSTV 299
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L KLGR EA +M+AM AG PD +TYS ++ GLCKAG+ E+A + EM GC
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK---------NYDADADLLDVLINGFLS 490
P+ T+ L+ G C+ + A +M+E+ + + LI G
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEA----ERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCK 415
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
R++ A K M + P ++ T++E L + R +A +L
Sbjct: 416 AGRIDDALKFFQRMRSQ-GCDPDGVSYSTIVEGLARSGRALQAEMIL 461
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 158/345 (45%), Gaps = 21/345 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ +L + V + +++E+ G D Y K+ K + +A++L
Sbjct: 81 DMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELL 140
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M+ P++ + L+ N L + + K + G Y+ + L
Sbjct: 141 EEMIRAGCCPTLITFNTLISGCCREKN--LEMADSLLQKMAASGVKADVVTYNTLMDGLC 198
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR EAE++++ MK +G PD + YS ++GLCK+G+ DA VL++M ++ P++
Sbjct: 199 KAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVV 258
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV-----LINGFLSQKRVNGAYK 499
T+ ++ G C + ++D AL +MME+ +D L+V +++G R A
Sbjct: 259 TYNTILDGLCKSGKIDTAL----EMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARS 314
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
++ E + + RP T+ +L+ L A ++EEA+ +R M + P + V +
Sbjct: 315 VM-EAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGL 373
Query: 557 SKFGTVEDASEFLKALSVKEY------PSSAAYLQVFESFFNEGR 595
G + +A ++ +S PS + Y + GR
Sbjct: 374 CSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGR 418
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFE--PDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+G+ L KL R+ EAE++++ M + G PD +TYS ++ G CKAG+ E++ +L E
Sbjct: 48 YNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKE 107
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G PD +T ++ C + + AL +M+ + LI+G +K
Sbjct: 108 VISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKN 167
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
+ A LL +M ++ T+ TL++ L A RL+EA LL MK P
Sbjct: 168 LEMADSLLQKMAAS-GVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS 226
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
FV + K G V DA + L+ + + P+ Y + + G+ A +++
Sbjct: 227 SFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMM 280
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL + G N + Y+ ++ L + ++ +V+E M + G D+ TY +
Sbjct: 276 ALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLV 335
Query: 309 RQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLL--LRSISSINNPDLGLVFRVANKYE 365
K +E+AV+ E M+G +V CSL+ L S + + + +
Sbjct: 336 NGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGG 395
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S S Y+ + L K GR D+A K + M++ G +PD ++YS ++ GL ++GR
Sbjct: 396 GHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRAL 455
Query: 426 DACNVLDEM 434
A +L E+
Sbjct: 456 QAEMILSEV 464
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 104/241 (43%), Gaps = 14/241 (5%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P+++T++ ++ G K GR D +L+ M P++ ++ L++G C
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 459 VDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
A M+ + + D++ L++G+ +V + +LL E+I + LRP
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISR-GLRPDALM 119
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG---TVEDASEFLKALS 573
+ ++ L + RL EA+ LL M + P F IS +E A L+ ++
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 574 VKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYK-----CPHHIRQDSKISLLFGSAKSNK 627
+ Y + + GR EA+ LL + C + S S ++G KS K
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYS--SFVYGLCKSGK 237
Query: 628 V 628
V
Sbjct: 238 V 238
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 153/359 (42%), Gaps = 16/359 (4%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
PV+AL R + + N +TYN ++ V+ V+ EM+ + G D TY
Sbjct: 132 PVRALELLRQMP-----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K MEDA K+F E + G PS + L+ D+ L +R
Sbjct: 187 ATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVALQYR--ED 244
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR +A +++ M+ G PD TY+ +I G CK G
Sbjct: 245 MVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGN 304
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A V +EM G T+T LI +V F ++K D + +
Sbjct: 305 EKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNA 364
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + + A++++ EM EK R+ P T+ TLI RL+EA L+ M K+
Sbjct: 365 LINSHCAGGDMERAFEIMAEM-EKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKR 423
Query: 544 NYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + K G +DA +K + K P + Y+ + E A D
Sbjct: 424 GIQPD-----LGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAAD 477
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 6/360 (1%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A+ F G+KH+ TY+ ++ L R + ++++M+K+G ++ I
Sbjct: 116 AMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTPGLFVDII 175
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ + M +A+K F M++ Y+P + ++LL I I + L + K G
Sbjct: 176 EIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLL--IVLIEHKCLETALSLFKKLHEFG 233
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S + Y+ + RA + A + M G PD TYS ++ GLC+ + + A
Sbjct: 234 ISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTAL 293
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
VLDEM G +PD T+ L+ C + A +KM + D + +I GF
Sbjct: 294 GVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGF 353
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ R A ++L +M E L P +++TL+ L + +EA + + M + P
Sbjct: 354 CREGRALDACQILRDMPENGCL-PNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPH 412
Query: 549 PEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ I+ G V +A E L ++ + + V E EA++L+ K
Sbjct: 413 ISIYHLLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVDK 472
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 8/303 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A GFF WVG GY H +Y+ ++ +L + + W ++ +M + G M + T K
Sbjct: 147 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTK 206
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R+ +A+ F M + ++LL ++ + V R ++
Sbjct: 207 VMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERS-----VKRARGVFQE 261
Query: 367 LGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L ++ ++ ++ + K EA M+ MK GF P +TY+ ++ C F
Sbjct: 262 LRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF 321
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ +LDEM + C P++ T+TIL+ A AL F K+ E DA + L
Sbjct: 322 QTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSL 381
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I R+ AY ++ EM + P TF TLI + E A+ LL M++Q+
Sbjct: 382 IYILGRAGRLEDAYSVVEEM-RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 440
Query: 545 YPP 547
P
Sbjct: 441 CNP 443
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 102/458 (22%), Positives = 190/458 (41%), Gaps = 45/458 (9%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
S ++T V +L + ND A FF WV + + + Y LM+ L W
Sbjct: 127 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 186
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMDNVAKT 205
+ +M E + T ++ L A + ++ A++ FH G+VK+ NV
Sbjct: 187 GLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE--AIDAFHKMDRFGVVKDTKAMNV--- 241
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
L+D T+ KE + +A G F+ + N
Sbjct: 242 LLD----------------------------TLCKERSVK--RARGVFQELRGTIPPDEN 271
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+ +N ++ + +++ + +EEMK+ G+ + TY + + + + L +
Sbjct: 272 S--FNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLD 329
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M P+V ++L+ ++ L +K + G + S Y+ + L +
Sbjct: 330 EMRKRRCPPNVVTYTILMHALGKAGRTREAL--DTFDKLKEDGVAPDASFYNSLIYILGR 387
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR ++A +++ M+ G P+ T++ +I C + E+A +L +MEE C PDIKT
Sbjct: 388 AGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKT 447
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T L++ C V L M K+ D +L++ +V + L EM+
Sbjct: 448 YTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMV 507
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
K P Q TF ++EK L R L+ +++++ Q
Sbjct: 508 SK-GFAPKQETFDLVMEK-LEKRNLQSVYKKIQVLRTQ 543
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 6/200 (3%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+Y ++ L K +F+ ++++M E G + + T T +++ A+ A+ F KM
Sbjct: 168 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 227
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
D ++VL++ ++ V A + E+ + + P + +F TL+ AR
Sbjct: 228 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARM 285
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS----VKEYPSSAAYLQ 585
L+EA++ + MK+ + P + + + +D L + P+ Y
Sbjct: 286 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 345
Query: 586 VFESFFNEGRHYEAKDLLYK 605
+ + GR EA D K
Sbjct: 346 LMHALGKAGRTREALDTFDK 365
>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
Length = 864
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWN----VVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G + N+ITYN ++ S+ WN V ++M G +D K
Sbjct: 289 AGTRPNSITYNSLIH----GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 344
Query: 316 MMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+A +F+ M + GP KP + S +L ++ + L V + N + G + +K
Sbjct: 345 RTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 403
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V++ + A + G D+A + + M+N G PD +T++ VI LC+ GR +DA + + M
Sbjct: 404 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 463
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA-DLLDVLINGFLSQKR 493
+ G P + LIQG C E+ +A ++MM K+ +IN + R
Sbjct: 464 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 523
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
V K +++M+ + RP TF +L+E +EEA LL M P
Sbjct: 524 V-AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 582
Query: 551 PFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V K G ++DA + F L P+S Y + F R AK + ++
Sbjct: 583 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 638
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 20/353 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ AR + + E+M+ +G D T+ + + ++DA
Sbjct: 397 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 456
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ F M+D PS L++ N+ +L E + ++K +
Sbjct: 457 LHKFNHMVDIGVPPSEAVYGCLIQGCC--NHGEL------VKAKELISEMMNKDIPPPGV 508
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ I L K GR E + +M M G P+ +T++ ++ G C G E+A +LD
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G P+ + L+ G+C +D AL F M+ K + L ++++G +R
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 628
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+ EMIE T+ ++ L +EA LL + N F
Sbjct: 629 TTAAKKMFHEMIESGTTVSIH-TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 687
Query: 554 QYIS---KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
IS K G ++A E A+S P+ Y + + E + EA +L
Sbjct: 688 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 740
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 14/322 (4%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM ++G I I ++ K + M+ A + + M+D P + SL++ +
Sbjct: 215 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 274
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D RV + G + Y+ + + G ++E+ ++ K M + G P
Sbjct: 275 AMDK--AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 332
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL--CFAK 468
+ I L K GR +A + D M G PDI +++ ++ G+ A + A + F
Sbjct: 333 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 392
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K + + ++LIN + ++ A L+ E ++ + P TF T+I L
Sbjct: 393 MLTKGIAPNKHVFNILINAYARCGMMDKAM-LIFEDMQNKGMIPDTVTFATVISSLCRIG 451
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
RL++A++ M PP + +Q G + A E + + K+ P ++
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG--VK 509
Query: 586 VFESFFN----EGRHYEAKDLL 603
F S N EGR E KD++
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIM 531
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 YDGIHR---ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y +HR L +GR +KN G PD+ +YS +I+G K G + A +
Sbjct: 166 YRRVHRPDLGLAIVGRL---------LKN-GLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 214
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM E G +P I +I+ C E+D+A KM++ D ++I+G K
Sbjct: 215 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 274
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-- 550
++ A ++L +M+E RP T+ +LI + E++ + + M P +
Sbjct: 275 AMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 333
Query: 551 -PFVQYISKFGTVEDASEFLKALSVK 575
F+ + K G +A ++ +K
Sbjct: 334 NSFIHALFKHGRTNEAKCIFDSMVLK 359
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYDGIHRALTKLGRFDEA 392
P++ ++L+ ++ PDLGL LG + S S+ G K G D+A
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG----FVKDGEVDKA 209
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ M G P + + +I LCK + A +++ +M ++G PD+ T++++I G
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + +D+A +M+E ++ + LI+G+ N + ++ +M + P
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCGVIP 328
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+ I L R EA + M + P + + + T D+
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 381
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 2/243 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + N +T+N ++ ++ + + +++ M G E + Y + + K ++
Sbjct: 536 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 595
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA+ +F M+ KP+ S++L + ++ ++ G ++S Y
Sbjct: 596 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK--KMFHEMIESGTTVSIHTYGV 653
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L + DEA +++ + + D IT++ VI + K GR ++A + D + G
Sbjct: 654 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 713
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+I+T++++I + A F + + + +D+ LL+ ++ L++ V A
Sbjct: 714 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 773
Query: 499 KLL 501
L
Sbjct: 774 NYL 776
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 12/243 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N Y ++ ++ + D V +M +G + Y I + R A
Sbjct: 573 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 632
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----LGLVFRVANKYESLGNSLSKSV 375
K+F M++ S+ ++L + N D L +F + K++ +
Sbjct: 633 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII-------T 685
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ K+GR EA+++ A+ G P+ TYS +I L K +E+A N+ +E
Sbjct: 686 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 745
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
++G D + +++ EV +A + + E N +A + +L + F + +
Sbjct: 746 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 805
Query: 496 GAY 498
G +
Sbjct: 806 GLF 808
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 188/439 (42%), Gaps = 26/439 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
++ P+ Y++++ L K +Q + M + + TY ++ G K A
Sbjct: 262 RRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLA 321
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L+ + MV + A VA T + G K+G+ + M+ +LSD +L
Sbjct: 322 EALS----LQEEMVLKGASPTVA-TYNSFIYGLC---KLGRMSDAMQ-QLSDMLANNLLP 372
Query: 241 ELRIYPVKALGFFRWVGE-----------HSGYKHNTI-TYNGILRVLARHESVRDFWNV 288
++ Y G+ R +G S Y TI TYN +L L R + +
Sbjct: 373 DVVSYNTLIYGYCR-LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQL 431
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
EM EG DI TY + K + A + F+ M+ + + + R +
Sbjct: 432 KVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE--LDSYAYATRIVGE 489
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+ D F + + + G +Y+ + L KLG +EA ++++ M + G PD
Sbjct: 490 LKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDY 549
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ +I + GR + EM G P + T+T+LI GH ++RA + F++
Sbjct: 550 VTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSE 609
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M EK + + LING +R++ AY EM+EK + P + ++ LI +
Sbjct: 610 MQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK-GIFPNKYSYTILINENCNMG 668
Query: 529 RLEEAMNLLRLMKKQNYPP 547
+EA++L + M + P
Sbjct: 669 NWQEALSLYKQMLDRGVQP 687
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 56/383 (14%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
VL R P AL FRW G++ + + IL +LA++ +R + V+E +
Sbjct: 87 VLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 146
Query: 298 EMDIDTYIK--ISRQ------------FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+D I +S + + K M+E + +F+ M+ P V++C+ +L
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
R + + DL +SK+V ++ + M G
Sbjct: 207 RIL---RDKDL----------------MSKAV------------------EVYRTMGEFG 229
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+P +TY+ ++ CK G+ + ++L EM+ GC P+ T+ +LI G E ++A
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+M++ A + LI G+ ++ + A L EM+ K P AT+ + I
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK-GASPTVATYNSFIYG 348
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL-SVKEYPS 579
L R+ +AM L M N P + I + G + A L S+ +P+
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 580 SAAYLQVFESFFNEGRHYEAKDL 602
Y + + +G A+ L
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQL 431
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 101/224 (45%), Gaps = 10/224 (4%)
Query: 259 HSGYKHNTITY-NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
H G + ++ Y I+ L ++ R F ++ EEM +G+ D+ Y + K +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAF-SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530
Query: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV- 375
E+A +L + M+ DG V S++ + + +F YE L L+ SV
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF-----YEMLSKGLTPSVV 585
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + GR + A M+ G P+ ITY+ +I GLCK R + A N EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
E G P+ ++TILI +C AL + +M+++ D+
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDS 689
>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
thaliana]
Length = 701
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 233/516 (45%), Gaps = 46/516 (8%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
LTHE + V+ L ++ A FF W ++FR +Y + +L+ +L++
Sbjct: 89 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHE 148
Query: 151 TLRRMKEDHCYIEE--ETYLSILGVLKKAKKASDLA----------------ALNQFHDG 192
+R M + I E ++ + + S + A N F +
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKK---LEDM--KIELSDN----FVLTVLKELR 243
V+ + D+ + L+ V+G D KI + L M + + DN +LT L E
Sbjct: 209 SVRGVVPDSSSYKLM--VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ +FR + + G+K N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 267 LVN-RAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 324
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISS---INNPDLGLVFR 359
+ + K E A +LF + + YKP+V + ++ +N ++
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM----- 379
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ ++ + G + + Y + K G F A ++M M + GF P+ TY+ I LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K R +A +L++ G D T+TILIQ C N++++AL F +M + ++AD
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L ++LI F QK++ + +L +++ + L P + T+ ++I ++ A+
Sbjct: 500 LNNILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 540 MKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
MK+ P + IS K V++A + +A+
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 12/304 (3%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R F + + +AV + M + PS S+ + + I +LGL+ N ++ +
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPS----SITMNCVLEIA-VELGLIEYAENVFDEMS 209
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G S Y + + G+ EA++ + M GF PDN T + ++ LC+ G
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +M + G P++ +T LI G C + +A +M+ + + LI
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G + A++L ++++ +P T+ ++I +L A L MK+Q
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I+ K G+ A E + + + + P+ Y +S + R EA +
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 602 LLYK 605
LL K
Sbjct: 450 LLNK 453
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 5/247 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN + L + + + ++ + G E D TY + ++ K + A
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M ++ ++ ++L+ + + R+ SLG +K Y +
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFC--RQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G D A K MK G PD+ TY +I GLCK ++AC + + M + G
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P T L +C N+ A++ + +K + + L+ S+K+V A
Sbjct: 601 PPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALF 657
Query: 501 LVEMIEK 507
+++EK
Sbjct: 658 FQKLLEK 664
>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
Length = 844
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWN----VVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G + N+ITYN ++ S+ WN V ++M G +D K
Sbjct: 309 AGTRPNSITYNSLIH----GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 364
Query: 316 MMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+A +F+ M + GP KP + S +L ++ + L V + N + G + +K
Sbjct: 365 RTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 423
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V++ + A + G D+A + + M+N G PD +T++ VI LC+ GR +DA + + M
Sbjct: 424 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 483
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA-DLLDVLINGFLSQKR 493
+ G P + LIQG C E+ +A ++MM K+ +IN + R
Sbjct: 484 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 543
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
V K +++M+ + RP TF +L+E +EEA LL M P
Sbjct: 544 V-AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 602
Query: 551 PFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V K G ++DA + F L P+S Y + F R AK + ++
Sbjct: 603 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 658
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 143/354 (40%), Gaps = 20/354 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ AR + + E+M+ +G D T+ + + ++DA
Sbjct: 417 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 476
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ F M+D PS L++ N+ +L E + ++K +
Sbjct: 477 LHKFNHMVDIGVPPSEAVYGCLIQGCC--NHGEL------VKAKELISEMMNKDIPPPGV 528
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ I L K GR E + +M M G P+ +T++ ++ G C G E+A +LD
Sbjct: 529 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 588
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G P+ + L+ G+C +D AL F M+ K + L ++++G +R
Sbjct: 589 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 648
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+ EMIE T+ ++ L +EA LL + N F
Sbjct: 649 TTAAKKMFHEMIESGTTVSIH-TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 707
Query: 554 QYIS---KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
IS K G ++A E A+S P+ Y + + E + EA +L
Sbjct: 708 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 761
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 14/322 (4%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM ++G I I ++ K + M+ A + + M+D P + SL++ +
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D RV + G + Y+ + + G ++E+ ++ K M + G P
Sbjct: 295 AMDK--AERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 352
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL--CFAK 468
+ I L K GR +A + D M G PDI +++ ++ G+ A + A + F
Sbjct: 353 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 412
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K + + ++LIN + ++ A L+ E ++ + P TF T+I L
Sbjct: 413 MLTKGIAPNKHVFNILINAYARCGMMDKAM-LIFEDMQNKGMIPDTVTFATVISSLCRIG 471
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
RL++A++ M PP + +Q G + A E + + K+ P ++
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG--VK 529
Query: 586 VFESFFN----EGRHYEAKDLL 603
F S N EGR E KD++
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIM 551
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 YDGIHR---ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y +HR L +GR +KN G PD+ +YS +I+G K G + A +
Sbjct: 186 YRRVHRPDLGLAIVGRL---------LKN-GLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 234
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM E G +P I +I+ C E+D+A KM++ D ++I+G K
Sbjct: 235 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 294
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-- 550
++ A ++L +M+E RP T+ +LI + E++ + + M P +
Sbjct: 295 AMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 353
Query: 551 -PFVQYISKFGTVEDASEFLKALSVK 575
F+ + K G +A ++ +K
Sbjct: 354 NSFIHALFKHGRTNEAKCIFDSMVLK 379
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYDGIHRALTKLGRFDEA 392
P++ ++L+ ++ PDLGL LG + S S+ G K G D+A
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG----FVKDGEVDKA 229
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ M G P + + +I LCK + A +++ +M ++G PD+ T++++I G
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + +D+A +M+E ++ + LI+G+ N + ++ +M + P
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCGVIP 348
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+ I L R EA + M + P + + + T D+
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 401
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 2/243 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + N +T+N ++ ++ + + +++ M G E + Y + + K ++
Sbjct: 556 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 615
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA+ +F M+ KP+ S++L + ++ ++ G ++S Y
Sbjct: 616 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK--KMFHEMIESGTTVSIHTYGV 673
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L + DEA +++ + + D IT++ VI + K GR ++A + D + G
Sbjct: 674 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 733
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+I+T++++I + A F + + + +D+ LL+ ++ L++ V A
Sbjct: 734 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 793
Query: 499 KLL 501
L
Sbjct: 794 NYL 796
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 12/246 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N Y ++ ++ + D V +M +G + Y I + R A
Sbjct: 593 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 652
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----LGLVFRVANKYESLGNSLSKSV 375
K+F M++ S+ ++L + N D L +F + K++ +
Sbjct: 653 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII-------T 705
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ K+GR EA+++ A+ G P+ TYS +I L K +E+A N+ +E
Sbjct: 706 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 765
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
++G D + +++ EV +A + + E N +A + +L + F + +
Sbjct: 766 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYR 825
Query: 496 GAYKLL 501
KLL
Sbjct: 826 EHIKLL 831
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 123/511 (24%), Positives = 214/511 (41%), Gaps = 56/511 (10%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
P + ++V L+N + A F N V K P + Y+ +L L K L
Sbjct: 206 PNVNTFNIVIYGYCLENKFKDAVEFLN-VMGKYNCSPDNVTYNTILDALCKKGRLGDARD 264
Query: 151 TLRRMKEDHCYIEEETYLSI------LGVLKKAKKASDLAALNQF--------------- 189
L MK TY + +G LK+A +L N
Sbjct: 265 LLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC 324
Query: 190 HDGMVKEI-----AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
++G ++E M+N+ K L DVV ++ I LE KI S+ F L L+E+
Sbjct: 325 NEGRIEEAFKLRDEMENL-KLLPDVV---SYNTLINGCLEWSKI--SEAFKL--LEEM-- 374
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
G K N +T+N +++ + + D N + +M++ G+ D TY
Sbjct: 375 -------------SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + K M +A + + M K + +LR++ L +++ +
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCR--EKKLEEAYKLLSSA 479
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G + + Y + K G D A K+ MK P +TY+ +I GLC+ G+
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E A + L+E+ E+G +PD T+ ++ G+C +V++A KM+E ++ D ++L
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ G + + A KL + K + T+ TLI L RL++A NLL M+++
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAID-TVTYNTLITSLCKEGRLDDAFNLLSEMEEKE 658
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLKAL 572
P + I+ G + +A EF+ +
Sbjct: 659 LGPDHYTYNAIITALTDSGRIREAEEFMSKM 689
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 161/353 (45%), Gaps = 14/353 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A+ F +G+++ N +TYN IL L + + D +++ +MK G + +TY +
Sbjct: 227 AVEFLNVMGKYNCSPDN-VTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILV 285
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++A + E M P V ++L+ + N + F++ ++ E+L
Sbjct: 286 YGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLC--NEGRIEEAFKLRDEMENLK 343
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+ + + + EA K+++ M G +P+ +T++ ++ CK G+ +DA
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N + +MEE+G PD T+ LI G+C A + A +M KN D+ L+ ++
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+K++ AYKLL R R + + ++ TLI ++ A+ L MK++
Sbjct: 464 CREKKLEEAYKLL----SSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEI 519
Query: 546 PPFPEPF---VQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEG 594
P + + + + G E A S+ + L P Y + + EG
Sbjct: 520 IPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREG 572
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 97/236 (41%), Gaps = 40/236 (16%)
Query: 403 GFEPDNITYSQVIFGLC-----------------------------------KAGRFEDA 427
G P+ T++ VI+G C K GR DA
Sbjct: 203 GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDA 262
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++L +M+ G +P+ T+ IL+ G+C + A M + N D ++LING
Sbjct: 263 RDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLING 322
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ R+ A+KL EM E ++L P ++ TLI L ++ EA LL M ++ P
Sbjct: 323 LCNEGRIEEAFKLRDEM-ENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKP 381
Query: 548 FP---EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
V++ K G ++DAS + + + P Y + + G EA
Sbjct: 382 NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 85/177 (48%), Gaps = 2/177 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T+TYN I+ L + + + E+ + G D TY I + + +E A +
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M++ +KP V C++LLR + L ++ N + S G ++ Y+ + +L
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCM--EGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLC 639
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K GR D+A ++ M+ PD+ TY+ +I L +GR +A + +M E G +P
Sbjct: 640 KEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP 696
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 193/467 (41%), Gaps = 77/467 (16%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
+ + +V+ W L + + FV+ VL+ L+ +A+ +FRW +
Sbjct: 35 IVNDICNVLETGAWGPSAENALSALNFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTE 93
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
H +YN +L V+AR + ++ EM G+ ++T I++ K + +
Sbjct: 94 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGF 153
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ + M ++P+ + L+ + S++N+ D+ L + + + LG + ++ + R
Sbjct: 154 DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT--LFQQMQELGYEPTVHLFTTLIR 211
Query: 382 ALTKLGRFDEAEKMMKAMKNA-----------------------------------GFEP 406
K GR D A ++ MK++ G +P
Sbjct: 212 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 271
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA---- 462
D +TY+ +I LCKA R ++A + + +E+N +P + +I G+ +A + D A
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 463 ------------------LLCFAKM------------MEKNYDADADLLDVLINGFLSQK 492
L C KM M+K+ + ++LI+
Sbjct: 332 ERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKDAAPNLSTYNILIDMLCRAG 391
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+++ A++L M +K L P T ++++L +++L+EA + M + P F
Sbjct: 392 KLDCAFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITF 450
Query: 553 VQYI---SKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGR 595
I K G V+DA + + K L +S Y + ++FFN GR
Sbjct: 451 CSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGR 497
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/436 (21%), Positives = 172/436 (39%), Gaps = 65/436 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ ++M+ L L + +M C +E T+ S++ L K + D
Sbjct: 410 PNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAY-- 467
Query: 187 NQFHDGMVKEIAMDN--VAKTLVDVVLGSDWDDKIGKKLEDM-------KIELSDNFVLT 237
+ ++ M+ N V +L+ + K +DM ++L + ++
Sbjct: 468 -KIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDC 526
Query: 238 VLKELRIYPVKALGFF------RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ K P K F R+V + Y +I +G+++ +E+ F++
Sbjct: 527 MFKAGE--PEKGRAMFEEIKSRRFVPDARSY---SILIHGLIKAGFANETYELFYS---- 577
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
MK++G +D Y + F K + A +L E M ++P+V
Sbjct: 578 MKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV--------------- 622
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
Y + L K+ R DEA + + K+ E + + Y
Sbjct: 623 ----------------------VTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
S +I G K GR ++A +L+E+ + G P++ TW L+ A E++ AL+CF M E
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ +LING ++ N A+ EM +K ++P ++ T+I L A +
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 532 EAMNLLRLMKKQNYPP 547
EA L K P
Sbjct: 780 EAGALFDRFKANGGVP 795
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 102/416 (24%), Positives = 182/416 (43%), Gaps = 33/416 (7%)
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+E TY S++GVL KA + + + + H + + T++ + D+
Sbjct: 272 DEVTYTSMIGVLCKANRLDEAVEMFE-HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 330
Query: 223 LEDMKIE------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
LE + + ++ N +LT L+++ +AL F + + + N TYN ++ +L
Sbjct: 331 LERQRAKGSIPSVIAYNCILTCLRKMGKVD-EALRVFEEMKKDAA--PNLSTYNILIDML 387
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + + + + M+K G ++ T + + K + +++A +FE M YK
Sbjct: 388 CRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQM---DYKVCT 444
Query: 337 QD----CSLLLRSISSINNPDLGLVFRVANKY---ESLGNSLSKS---VYDGIHRALTKL 386
D CSL+ LG V RV + Y E + +S ++ VY + +
Sbjct: 445 PDEITFCSLI---------DGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNH 495
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR ++ K+ K M N PD + + + KAG E + +E++ +PD +++
Sbjct: 496 GRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSY 555
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ILI G A + F M E+ D +++I+GF +VN AY+LL EM
Sbjct: 556 SILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKT 615
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
K P T+ ++I+ L RL+EA L K + + I FG V
Sbjct: 616 K-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKV 670
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 123/626 (19%), Positives = 242/626 (38%), Gaps = 70/626 (11%)
Query: 29 FTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELENKLEE 88
F R H+SS + + ++H + ++I N ++ W EN L
Sbjct: 4 FARTKFCKHLSSLSDNGENHEKPYTFEGNRQIV-----NDICNVLETGAWGPSAENALSA 58
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ------------------------ 124
L+ K E V+ VLR+L D +A +F W + +
Sbjct: 59 LNFKPQPEFVIGVLRRL-KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL 117
Query: 125 -----------FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
F PS M+ + V + L++ + ++ M++ Y +++G
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMRKFKFRPAFSAYTTLIGA 177
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL---EDMKIEL 230
+ + L Q ++E+ + ++ G + ++ L ++MK
Sbjct: 178 FSAVNHSDMMLTLFQ----QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 231 SDNFVLTVLKELRIYPVKALG-------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
D + VL + I +G FF + E +G K + +TY ++ VL + +
Sbjct: 234 LDADI--VLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + E ++K Y + + ++A L E PSV + +L
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ + D L K ++ N S Y+ + L + G+ D A ++ +M+ AG
Sbjct: 351 TCLRKMGKVDEALRVFEEMKKDAAPNL---STYNILIDMLCRAGKLDCAFELRDSMQKAG 407
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P+ T + ++ LCK+ + ++AC + ++M+ C PD T+ LI G VD A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ KM++ + ++ + LI F + R +K+ +M+ + P T ++
Sbjct: 468 KIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQ-NCSPDLQLLNTYMDC 526
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPS- 579
+ A E+ + +K + + P + + + K G + E S+KE
Sbjct: 527 MFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELF--YSMKEQGCV 584
Query: 580 --SAAYLQVFESFFNEGRHYEAKDLL 603
+ AY V + F G+ +A LL
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLL 610
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 110/263 (41%), Gaps = 18/263 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+T YN ++ + V + ++EEMK +G+E + TY + K +++A LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKSVY--DG 378
E + +V S L+ G V R+ Y E + L+ +VY +
Sbjct: 646 EEAKSKRIELNVVIYSSLIDG--------FGKVGRIDEAYLILEELMQKGLTPNVYTWNS 697
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ AL K +EA ++MK P+ +TY +I GLCK +F A EM++ G
Sbjct: 698 LLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQG 757
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P ++T +I G A + A F + D+ + +I G + R A+
Sbjct: 758 MKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAF 817
Query: 499 KLLVEMIEKVRLRPWQATFKTLI 521
L E+ R R KT +
Sbjct: 818 SLF----EETRRRGLHIHNKTCV 836
>gi|357121428|ref|XP_003562422.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Brachypodium distachyon]
Length = 663
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 122/547 (22%), Positives = 218/547 (39%), Gaps = 53/547 (9%)
Query: 85 KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
+LE L +L V V+R L +D E A F+ W + F S +
Sbjct: 80 ELERLDVELDPIVVNLVVRGL-SDSETAVRFYWWAESRPGFDHSQFAIA----------- 127
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ V+L M + + E LG +K A + G V+ D+V +
Sbjct: 128 ---YLVSLLFMDGNFALLSE-----FLGRVKSQGVALHRSLYRILLSGYVRAGKFDSVIE 179
Query: 205 TLVDVVL------GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG- 257
T ++V+ G D++ IG +++ +L + + L + + + + RW+
Sbjct: 180 TFDEMVMSGCREFGVDYNRYIGVLVKNCCFDLVEKYYDMALA--KGFCLTPFTYSRWISA 237
Query: 258 -----------------EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
+ G + N + L + + D +VE+M+ +G D
Sbjct: 238 LCQSNRIELVQELLVDMDKLGCSPDIWACNIYIYYLCKQNRLPDALQMVEKMRTKGTSPD 297
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ TY + + +A+ L+E M+ KP V C L+ + N D F +
Sbjct: 298 VVTYQTVVSGLCDNKKFAEAIGLWEEMVKRDLKPDVFSCGALIFGLCKNNKVDEA--FEL 355
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A++ +L LS +Y+ + + G D+A K++ M+ G EPD +TY+ ++ C
Sbjct: 356 ASRMLTLDIELSVCIYNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCT 415
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G E A ++ +ME +G PD ++ L++G C +++D+A + ME D
Sbjct: 416 IGMMEKAEKLIRKMETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVS 475
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
++LI+ F K+V A +L EM K ++ T+ TLI L A L M
Sbjct: 476 CNILIDAFCKTKKVKSALELFKEMGYK-GMQADAVTYGTLINGLFSVGYYNLAEELFEQM 534
Query: 541 KKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
P + ++ K G + A + KE P + + + R
Sbjct: 535 LNAQIDPNVNLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRA 594
Query: 597 YEAKDLL 603
EA +L
Sbjct: 595 IEALNLF 601
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 107/272 (39%), Gaps = 35/272 (12%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ R S+ + ++ M+ G E DI TY + + MME A KL M
Sbjct: 371 YNALISGFWRAGSIDKAYKIISFMRTNGCEPDIVTYNILLNHYCTIGMMEKAEKLIRKME 430
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG--NSLSKSV----------- 375
P + LL+ + + D F V++ E G +++S ++
Sbjct: 431 TSGVNPDRYSYNQLLKGLCKTHQLDKAFAF-VSDHMEVGGFCDTVSCNILIDAFCKTKKV 489
Query: 376 ---------------------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
Y + L +G ++ AE++ + M NA +P+ Y+ +
Sbjct: 490 KSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLAEELFEQMLNAQIDPNVNLYNIM 549
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ LCK G F+ A + M + PD T+ LI + AL F M +
Sbjct: 550 LHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKDMRTRGV 609
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ D LI+G L + + AY++ M+E
Sbjct: 610 EPDTLTFKYLISGLLDEGKSTLAYEVWEYMME 641
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 107/240 (44%), Gaps = 10/240 (4%)
Query: 258 EHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E SG + +YN +L+ L + H+ + F V + M+ G+ + I I F K +
Sbjct: 430 ETSGVNPDRYSYNQLLKGLCKTHQLDKAFAFVSDHMEVGGFCDTVSCNILID-AFCKTKK 488
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL---SK 373
++ A++LF+ M + L+ + S+ +L +E + N+ +
Sbjct: 489 VKSALELFKEMGYKGMQADAVTYGTLINGLFSVGYYNLA-----EELFEQMLNAQIDPNV 543
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
++Y+ + L K+G F A+ + M PD +T++ +I+ L K R +A N+ +
Sbjct: 544 NLYNIMLHHLCKVGHFKRAQTIFSHMIQKEVSPDTVTFNTLIYWLGKRSRAIEALNLFKD 603
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G PD T+ LI G + A + MME D ++ + LI+ S+ +
Sbjct: 604 MRTRGVEPDTLTFKYLISGLLDEGKSTLAYEVWEYMMENGIILDREVSERLISVLKSKNK 663
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 127/551 (23%), Positives = 234/551 (42%), Gaps = 62/551 (11%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPS--STVYSLM 135
W D LE++ E K+ V + + +D E A FF+W + F S +S +
Sbjct: 41 WQDSLESRFAE--SKVVVSDVAHFVIDRVHDAELALKFFDWA-STRPFSCSLDGVAHSSL 97
Query: 136 LRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH----- 190
L+ L + + + L MK H E + ++ +L + S AL FH
Sbjct: 98 LKLLASFRVFPEIELVLENMKAQHLKPTREAFSAL--ILAYGESGSLDRALQLFHTVREM 155
Query: 191 --------------DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
+G+VK +D VA L D +L +D D G + DN+
Sbjct: 156 HNCLPTVVASNSLLNGLVKSGKVD-VALQLYDKMLQTD--DGTG--------AVVDNYTT 204
Query: 237 T-VLKEL----RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ V+K L +I + L RW G + + YN I+ + ++ ++E
Sbjct: 205 SIVVKGLCNLGKIEEGRRLVKDRW---GKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKE 261
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+K +G ++TY + F K E +L M + + ++ ++ +++ +
Sbjct: 262 LKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEM-------AARGLNMNVKVFNNVID 314
Query: 352 PDL--GLVFRVAN---KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ GLV + A + +G + Y+ + K GR EA++ ++ K G P
Sbjct: 315 AEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLP 374
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ +Y+ ++ CK G + A +L + E G PD+ ++ I G E+D AL+
Sbjct: 375 NKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVR 434
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
KMMEK DA + +VL++G R LL EM+++ ++P F TL++ +
Sbjct: 435 EKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDR-NVQPDVYVFATLMDGFIR 493
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAA 582
L+EA+ + +++ ++ P + ++ KFG + DA L + +V P
Sbjct: 494 NGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYT 553
Query: 583 YLQVFESFFNE 593
Y V + + +
Sbjct: 554 YSTVIDGYVKQ 564
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V+ + + G DEA K+ K + G +P + Y+ +I G CK G+ DA + L++M
Sbjct: 483 VFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKM 542
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ PD T++ +I G+ +++ AL F +MM+ + + LINGF + +
Sbjct: 543 KNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADM 602
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A K+ M + L P T+ TL+ A + E+A ++ LM PP
Sbjct: 603 IRAEKVFRGM-KSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPP 654
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 112/280 (40%), Gaps = 8/280 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
VKA G + E G K + ++Y + + H + V E+M ++G D Y
Sbjct: 393 VKAAGMLFRIAE-IGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNV 451
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K L M+D +P V + L+ I N +L ++
Sbjct: 452 LMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGF--IRNGELDEAIKIFKVIIR 509
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G Y+ + + K G+ +A + MKN PD TYS VI G K
Sbjct: 510 KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSS 569
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVL 484
A + +M ++ P++ T+T LI G C ++ RA F M K++D +++ L
Sbjct: 570 ALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGM--KSFDLVPNVVTYTTL 627
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ GF + A + E++ P ATF LI L
Sbjct: 628 VGGFFKAGKPEKATSIF-ELMLMNGCPPNDATFHYLINGL 666
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 13/195 (6%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F + +H +K N ITY ++ + + V MK ++ TY +
Sbjct: 570 ALKMFGQMMKHK-FKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDL-----------GL 356
F K E A +FE M+ P+ L+ ++ + +P L L
Sbjct: 629 GGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSL 688
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+ S G + Y+ + L K G D A+ ++ M GF D++ ++ ++
Sbjct: 689 ILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLH 748
Query: 417 GLCKAGRFEDACNVL 431
GLC G+ ++ N++
Sbjct: 749 GLCHKGKSKEWRNII 763
Score = 38.9 bits (89), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 61/306 (19%), Positives = 113/306 (36%), Gaps = 63/306 (20%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + YN +++ + + D + + +MK + D TY + + K M A
Sbjct: 511 GVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSA 570
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL---GLVFRVANKYESLGNSLSKSVYD 377
+K+F MM +KP+V + L+ D+ VFR ++ + N ++ +
Sbjct: 571 LKMFGQMMKHKFKPNVITYTSLINGFC--KKADMIRAEKVFRGMKSFDLVPNVVTYTTLV 628
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT--------------------------- 410
G K G+ ++A + + M G P++ T
Sbjct: 629 G---GFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENE 685
Query: 411 ----------------------YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
Y+ VI LCK G + A +L +M G + D +T
Sbjct: 686 RSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTA 745
Query: 449 LIQGHC---AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
++ G C + E + C +E L ++ +L Q R++ A +L +I
Sbjct: 746 MLHGLCHKGKSKEWRNIISCDLNKIELQTAVKYSL---TLDKYLYQGRLSEASVILQTLI 802
Query: 506 EKVRLR 511
E+ R+R
Sbjct: 803 EEDRVR 808
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 11/338 (3%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+GF E G+K N ++YN I+ + ++ +++ M+ +G E D TY +
Sbjct: 272 IGFM----EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 327
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K +E+A LF+ M++ P+ + L+ N DL F ++ G
Sbjct: 328 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC--NKGDLERAFSYRDEMVKKGI 385
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S Y+ + AL GR EA+ M+K M+ G PD ITY+ +I G + G + A +
Sbjct: 386 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 445
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM G P T+T LI N + A F K++++ D + + +++G
Sbjct: 446 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 505
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ V A+ LL EM ++ + P + TF TL++ ++EEA LL MK++ P
Sbjct: 506 ANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 564
Query: 550 EPFVQYISKFGTVEDASEFLKA----LSVKEYPSSAAY 583
+ IS +G D + + LS+ P+ Y
Sbjct: 565 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 162/398 (40%), Gaps = 48/398 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++I ++ ++RV + + MK++G I+T + F K ME A L+
Sbjct: 178 SSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLY 237
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M +V ++++ + L E LG + Y+ I +
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCK--EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G + A +++ AM+ G EPD+ TY +I G+CK GR E+A + D+M E G +P+
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355
Query: 445 TWTILIQGHCAANEVDRA--------------------LLCFAKMME------------- 471
T+ LI G+C +++RA LL A ME
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415
Query: 472 --KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
K DA ++LING+ A+ L EM+ K + P T+ +LI L R
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVLSRRNR 474
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQ 585
++EA +L + Q P F + G VE A LK + K P +
Sbjct: 475 MKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNT 534
Query: 586 VFESFFNEGRHYEAKDLLYKC------PHHIRQDSKIS 617
+ + EG+ EA+ LL + P HI ++ IS
Sbjct: 535 LMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 572
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 2/228 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ +R + + +++ EM +G E TY + + M++A
Sbjct: 419 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 478
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LFE ++D P V + ++ + N ++ F + + + + ++ +
Sbjct: 479 DDLFEKILDQGVSPDVIMFNAMVDGHCA--NGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + G+ +EA ++ MK G +PD+I+Y+ +I G + G +DA V DEM G
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 596
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
P + T+ LI+ C E D A +M+ K D LI G
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 182/448 (40%), Gaps = 35/448 (7%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++R L +++ L RM C ++ TY +I+
Sbjct: 278 PDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTII--------------- 322
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
DG K + + L D V D++ + + + E I
Sbjct: 323 ----DGYCKSGMLQEATELLKDAVFKGFVPDRVTYC----------SLINGLCAEGDIE- 367
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+AL F + K + + YN +++ L R + V+ EM +EG DI TY
Sbjct: 368 -RALELFNE-AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNI 425
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
I K + DA + + Y P V + L+ D L ++ + +
Sbjct: 426 IINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL--QLVERMWT 483
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + Y+ + L K G+ E + + M G P+ ITY+ +I CK + E+
Sbjct: 484 YGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V+ M ++G +PD ++ LI G C ++D A L F K+ EK Y A AD ++LI
Sbjct: 544 ASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIG 603
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+ S+ + A K+ EMI K +P T++ L++ L A ++ A L M + +
Sbjct: 604 AYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFV 662
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSV 574
P F + ++ SE + + +
Sbjct: 663 PSMATFGRMLNLLAMNHRVSEAVAIIHI 690
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 134/305 (43%), Gaps = 11/305 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL R + E G Y ++R L H + ++ +EM D+ T+
Sbjct: 157 PHVALRLLRSLSER-GCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFN 215
Query: 306 KISRQF-QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ QK +ME L + + G + C++ +R + + G +
Sbjct: 216 NVLHALCQKGDVMESGALLAKVLKRG-MSANKFTCNIWIRGLC-----EDGRLEEAVALV 269
Query: 365 ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
E +G ++ V Y+ + R L K + EA + + M N G PD+ TY+ +I G CK+G
Sbjct: 270 ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSG 329
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
++A +L + G +PD T+ LI G CA +++RAL F + K+ D + +
Sbjct: 330 MLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYN 389
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L+ G Q + A +++ EM+E+ P T+ +I L + +A ++
Sbjct: 390 SLVKGLCRQGLILHALQVMNEMVEE-GCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIV 448
Query: 543 QNYPP 547
+ Y P
Sbjct: 449 KGYLP 453
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 152/352 (43%), Gaps = 22/352 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T+N +L L + V + ++ ++ K G + T R + +E+AV L
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269
Query: 325 EFMMDGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------VYD 377
E M G Y P V + L+R + + +V + LG +++ Y+
Sbjct: 270 ERM--GAYVAPDVVTYNTLMRGLCKDS--------KVQEAAQYLGRMMNQGCIPDDFTYN 319
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I K G EA +++K GF PD +TY +I GLC G E A + +E +
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
PD+ + L++G C + AL +M+E+ D +++ING ++ A
Sbjct: 380 DLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDA 439
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
++ + I K L P TF TLI+ +L+ A+ L+ M P + +
Sbjct: 440 AVVMNDAIVKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLN 498
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G ++ +E + + +K P++ Y + E+F + EA ++ +
Sbjct: 499 GLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 550
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 90/214 (42%), Gaps = 10/214 (4%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR A ++++++ G + Y V+ GL G +A ++ DEM PD+ T+
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATF 214
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
++ C +V + AK++++ A+ ++ I G R+ A L+ M
Sbjct: 215 NNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGA 274
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-----VQYISKFGT 561
V P T+ TL+ L +++EA L M Q P+ F + K G
Sbjct: 275 YV--APDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGC--IPDDFTYNTIIDGYCKSGM 330
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
+++A+E LK K + P Y + EG
Sbjct: 331 LQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG 364
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/360 (21%), Positives = 142/360 (39%), Gaps = 44/360 (12%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ D E+A FN K +P VY+ +++ L + + + M E+ C+ +
Sbjct: 363 EGDIERALELFNEA-QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIW 421
Query: 166 TYLSILGVLKKAKKASDLAAL----------------NQFHDGMVKEIAMDNVAKTLVDV 209
TY I+ L K SD A + N DG K + +D+ A LV+
Sbjct: 422 TYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDS-ALQLVER 480
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH------SGYK 263
+ W I + ++ N VL L KA G + V E G +
Sbjct: 481 M----WTYGIAPDV------ITYNSVLNGL-------CKA-GKAKEVNETFEEMILKGCR 522
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
N ITYN ++ + + + V+ M ++G D ++ + F + ++ A L
Sbjct: 523 PNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLL 582
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F+ + + Y + ++L+ + SS N + + ++ + S G Y + L
Sbjct: 583 FQKLDEKGYSATADTFNILIGAYSSKLN--MQMAEKIFGEMISKGYKPDLYTYRILVDGL 640
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K D A + M + GF P T+ +++ L R +A ++ M G +P++
Sbjct: 641 CKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVPEV 700
>gi|226530981|ref|NP_001141613.1| uncharacterized protein LOC100273731 [Zea mays]
gi|194705268|gb|ACF86718.1| unknown [Zea mays]
gi|414870824|tpg|DAA49381.1| TPA: hypothetical protein ZEAMMB73_722490 [Zea mays]
Length = 504
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 169/378 (44%), Gaps = 16/378 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRI---------YPVKALGFFRWVGEHSGYKHNTITYNGIL 273
L++M+ ++S V VL + + YP A FF W G+ GY+H+T YN ++
Sbjct: 127 LDEMRPKVSIELVREVLFRIVVSVDSVNRERYPKLAYKFFIWAGQQEGYQHSTSMYNLVM 186
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V A V+ W + EEM +G + T+ + K + V+ F Y+
Sbjct: 187 KVFAECGEVKAMWRLFEEMAAKGLPVSSRTFHLLICASVKVGLRRRLVERFIRSSTFNYR 246
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P + +L ++ +I L+ V K G S Y+ + RA LG+ D+
Sbjct: 247 PFRNAFNAILYTLLTIEQ--YSLIEWVHEKMILEGYSPDVLTYNVVLRAKYMLGKLDQFH 304
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+++ M G PD TY+ ++ L K + A N+L+ M + GC P++ +T LI G
Sbjct: 305 QLLDEMGKNGLTPDLHTYNLLLHVLGKGDKPLAALNLLNYMSDVGCRPNVLHFTNLIDGL 364
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
A ++ F +MM+K D D V+I +++ A + +M+ + +L P
Sbjct: 365 GRAGNLEACRYFFDEMMKKGCDPDVVCYTVMIASYVAAGEFEEAQRFFDDMLMRGQL-PN 423
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS 573
T+ ++I+ L ++A +L+ M P F Y S + +A + +A +
Sbjct: 424 VYTYNSMIQGLCAVGEFDKAFTMLKDMDSHGCTP---NFSVYSSLVRRLRNAGKDTQANN 480
Query: 574 VKEYPSSAA-YLQVFESF 590
V +Y + YL + F
Sbjct: 481 VIKYMTDKGHYLHLLSRF 498
>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
Length = 1302
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 120/513 (23%), Positives = 231/513 (45%), Gaps = 40/513 (7%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
LTHE + V+ L ++ A FF W ++FR +Y + +L+ +L++
Sbjct: 690 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHE 749
Query: 151 TLRRMKEDHCYIEE--ETYLSILGVLKKAKKASDLA----------------ALNQFHDG 192
+R M + I E ++ + + S + A N F +
Sbjct: 750 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 809
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKK---LEDM--KIELSDN----FVLTVLKELR 243
V+ + D+ + L+ V+G D KI + L M + + DN +LT L E
Sbjct: 810 SVRGVVPDSSSYKLM--VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 867
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ +FR + + G+K N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 868 LVN-RAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 925
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+ + K E A +LF + + YKP+V + ++ + + +
Sbjct: 926 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRM 985
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K + L +++ Y + K G F A ++M M + GF P+ TY+ I LCK
Sbjct: 986 KEQGLFPNVN--TYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 1043
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R +A +L++ G D T+TILIQ C N++++AL F +M + ++AD L +
Sbjct: 1044 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 1103
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+LI F QK++ + +L +++ + L P + T+ ++I ++ A+ MK+
Sbjct: 1104 ILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 1162
Query: 543 QNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
P + IS K V++A + +A+
Sbjct: 1163 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 1195
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 12/304 (3%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R F + + +AV + M + PS S+ + + I +LGL+ N ++ +
Sbjct: 756 RNFSEIGRLNEAVGMVMDMQNQGLTPS----SITMNCVLEIA-VELGLIEYAENVFDEMS 810
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G S Y + + G+ EA++ + M GF PDN T + ++ LC+ G
Sbjct: 811 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 870
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +M + G P++ +T LI G C + +A +M+ + + LI
Sbjct: 871 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 930
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G + A++L ++++ +P T+ ++I +L A L MK+Q
Sbjct: 931 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 990
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I+ K G+ A E + + + + P+ Y +S + R EA +
Sbjct: 991 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 1050
Query: 602 LLYK 605
LL K
Sbjct: 1051 LLNK 1054
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 5/247 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN + L + + + ++ + G E D TY + ++ K + A
Sbjct: 1024 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 1083
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M ++ ++ ++L+ + + R+ SLG +K Y +
Sbjct: 1084 LAFFCRMNKTGFEADMRLNNILIAAF--CRQKKMKESERLFQLVVSLGLIPTKETYTSMI 1141
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G D A K MK G PD+ TY +I GLCK ++AC + + M + G
Sbjct: 1142 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 1201
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P T L +C N+ A++ + +K + + L+ S+K+V A
Sbjct: 1202 PPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALF 1258
Query: 501 LVEMIEK 507
+++EK
Sbjct: 1259 FQKLLEK 1265
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 147/325 (45%), Gaps = 13/325 (4%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
PV+AL R + + N +TYN ++ V+ V+ EM+ + G D TY
Sbjct: 132 PVRALELLRQMP-----RPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTY 186
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K MEDAVK+F E + G PS + L+ + D+ L +R
Sbjct: 187 ATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYR--ED 244
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL R +A +++ M+ GF PD TY+ +I G CK G
Sbjct: 245 MVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGN 304
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A V +EM + G T+T LI +V F ++K D + +
Sbjct: 305 EKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNA 364
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + + AY+++ EM EK R+ P T+ TL+ RL+EA L+ M K+
Sbjct: 365 LINSHCTGGDMERAYEIMAEM-EKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Query: 544 NYPPFPEPFVQYISKF---GTVEDA 565
P + IS + G ++DA
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDA 448
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 180/406 (44%), Gaps = 39/406 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE-TYLSILGVLKKAKKA 180
++ RP++ Y+ ++ + ++ +R M+E ++ TY +++ K +
Sbjct: 140 RQMPRPNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRM 199
Query: 181 SDLAALNQFHDGMVK-EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
D A+ F + + K E+A V + + ++G D +GK D+ ++ ++ V
Sbjct: 200 ED--AVKVFDEMLTKGEVAPSAV---MYNALIGGYCD--VGKL--DVALQYREDMV---- 246
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
G TYN ++ L D + V+EEM+K G+
Sbjct: 247 -------------------QRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP 287
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D+ TY + + K + A+++FE M G +V SL+ + +F
Sbjct: 288 DVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLF 347
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
VA K G +Y+ + + G + A ++M M+ PD++TY+ ++ G
Sbjct: 348 NVAVKK---GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGF 404
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C GR ++A ++DEM + G PD+ ++ LI G+ ++ AL +MM+K ++
Sbjct: 405 CLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTL 464
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ LI G ++ + A L+ EM+ K + P +T+ +LIE L
Sbjct: 465 MTYNALIQGLCKIRQGDDAENLMKEMVAK-GITPDDSTYISLIEGL 509
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 101/234 (43%), Gaps = 2/234 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ +G+ + TYN ++ + + + V EEM ++G TY + F + +
Sbjct: 281 QKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQV 340
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ +LF + +P V + L+ S D+ + + + E Y+
Sbjct: 341 QETDRLFNVAVKKGIRPDVVMYNALINS--HCTGGDMERAYEIMAEMEKKRIPPDDMTYN 398
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ R LGR DEA ++ M G +PD ++Y+ +I G G +DA V DEM +
Sbjct: 399 TLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDK 458
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
G P + T+ LIQG C + D A +M+ K D LI G ++
Sbjct: 459 GFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 7/179 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A V
Sbjct: 114 LCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEV 169
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA-DADLLDVLINGF 488
+ EM E G I PD T+ LI G C ++ A+ F +M+ K A A + + LI G+
Sbjct: 170 MREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGY 229
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++ A + +M+++ + AT+ L+ L R +A +L M+K + P
Sbjct: 230 CDVGKLDVALQYREDMVQR-GIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSP 287
>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
Length = 740
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 155/356 (43%), Gaps = 16/356 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWN----VVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G + N+ITYN ++ S+ WN V ++M G +D K
Sbjct: 147 AGTRPNSITYNSLIH----GYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHG 202
Query: 316 MMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+A +F+ M + GP KP + S +L ++ + L V + N + G + +K
Sbjct: 203 RTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKH 261
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V++ + A + G D+A + + M+N G PD +T++ VI LC+ GR +DA + + M
Sbjct: 262 VFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHM 321
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA-DLLDVLINGFLSQKR 493
+ G P + LIQG C E+ +A ++MM K+ +IN + R
Sbjct: 322 VDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGR 381
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
V K +++M+ + RP TF +L+E +EEA LL M P
Sbjct: 382 V-AEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYG 440
Query: 551 PFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V K G ++DA + F L P+S Y + F R AK + ++
Sbjct: 441 TLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHE 496
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 143/353 (40%), Gaps = 20/353 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ AR + + E+M+ +G D T+ + + ++DA
Sbjct: 255 GIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDA 314
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ F M+D PS L++ N+ +L E + ++K +
Sbjct: 315 LHKFNHMVDIGVPPSEAVYGCLIQGCC--NHGEL------VKAKELISEMMNKDIPPPGV 366
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ I L K GR E + +M M G P+ +T++ ++ G C G E+A +LD
Sbjct: 367 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 426
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G P+ + L+ G+C +D AL F M+ K + L ++++G +R
Sbjct: 427 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 486
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+ EMIE T+ ++ L +EA LL + N F
Sbjct: 487 TTAAKKMFHEMIESGTTVSIH-TYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 545
Query: 554 QYIS---KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
IS K G ++A E A+S P+ Y + + E + EA +L
Sbjct: 546 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNL 598
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/322 (23%), Positives = 137/322 (42%), Gaps = 14/322 (4%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM ++G I I ++ K + M+ A + + M+D P + SL++ +
Sbjct: 73 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D RV + G + Y+ + + G ++E+ ++ K M + G P
Sbjct: 133 AMDKA--ERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDN 190
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL--CFAK 468
+ I L K GR +A + D M G PDI +++ ++ G+ A + A + F
Sbjct: 191 CNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNL 250
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K + + ++LIN + ++ A L+ E ++ + P TF T+I L
Sbjct: 251 MLTKGIAPNKHVFNILINAYARCGMMDKAM-LIFEDMQNKGMIPDTVTFATVISSLCRIG 309
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
RL++A++ M PP + +Q G + A E + + K+ P ++
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG--VK 367
Query: 586 VFESFFN----EGRHYEAKDLL 603
F S N EGR E KD++
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIM 389
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 91/206 (44%), Gaps = 18/206 (8%)
Query: 376 YDGIHR---ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y +HR L +GR +KN G PD+ +YS +I+G K G + A +
Sbjct: 24 YRRVHRPDLGLAIVGRL---------LKN-GLGPDDFSYS-LIYGFVKDGEVDKAHCLFL 72
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM E G +P I +I+ C E+D+A KM++ D ++I+G K
Sbjct: 73 EMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSK 132
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-- 550
++ A ++L +M+E RP T+ +LI + E++ + + M P +
Sbjct: 133 AMDKAERVLEQMVE-AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNC 191
Query: 551 -PFVQYISKFGTVEDASEFLKALSVK 575
F+ + K G +A ++ +K
Sbjct: 192 NSFIHALFKHGRTNEAKCIFDSMVLK 217
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 99/233 (42%), Gaps = 6/233 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYDGIHRALTKLGRFDEA 392
P++ ++L+ ++ PDLGL LG + S S+ G K G D+A
Sbjct: 12 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYG----FVKDGEVDKA 67
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ M G P + + +I LCK + A +++ +M ++G PD+ T++++I G
Sbjct: 68 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + +D+A +M+E ++ + LI+G+ N + ++ +M + P
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQM-SSCGVIP 186
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+ I L R EA + M + P + + + T D+
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDS 239
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/243 (19%), Positives = 111/243 (45%), Gaps = 2/243 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + N +T+N ++ ++ + + +++ M G E + Y + + K ++
Sbjct: 394 QTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRID 453
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA+ +F M+ KP+ S++L + ++ ++ G ++S Y
Sbjct: 454 DALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK--KMFHEMIESGTTVSIHTYGV 511
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L + DEA +++ + + D IT++ VI + K GR ++A + D + G
Sbjct: 512 VLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYG 571
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+I+T++++I + A F + + + +D+ LL+ ++ L++ V A
Sbjct: 572 LVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKAS 631
Query: 499 KLL 501
L
Sbjct: 632 NYL 634
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 111/265 (41%), Gaps = 22/265 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N Y ++ ++ + D V +M +G + Y I + R A
Sbjct: 431 GIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAA 490
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----LGLVFRVANKYESLGNSLSKSV 375
K+F M++ S+ ++L + N D L +F + K++ +
Sbjct: 491 KKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDII-------T 543
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ K+GR EA+++ A+ G P+ TYS +I L K +E+A N+ +E
Sbjct: 544 FNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVE 603
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
++G D + +++ EV +A + + E N +A + +L + F +
Sbjct: 604 KSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSRE---- 659
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTL 520
G Y+ E ++L P T +
Sbjct: 660 GKYR------EHIKLLPANMTMAVV 678
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 156/338 (46%), Gaps = 11/338 (3%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+GF E G+K N ++YN I+ + ++ +++ M+ +G E D TY +
Sbjct: 250 IGFM----EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 305
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K +E+A LF+ M++ P+ + L+ N DL F ++ G
Sbjct: 306 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC--NKGDLERAFSYRDEMVKKGI 363
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S Y+ + AL GR EA+ M+K M+ G PD ITY+ +I G + G + A +
Sbjct: 364 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFD 423
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM G P T+T LI N + A F K++++ D + + +++G
Sbjct: 424 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHC 483
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ V A+ LL EM ++ + P + TF TL++ ++EEA LL MK++ P
Sbjct: 484 ANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDH 542
Query: 550 EPFVQYISKFGTVEDASEFLKA----LSVKEYPSSAAY 583
+ IS +G D + + LS+ P+ Y
Sbjct: 543 ISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E LG + Y+ I + G + A +++ AM+ G EPD+ TY +I G+CK GR
Sbjct: 254 EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRL 313
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA--------------------LL 464
E+A + D+M E G +P+ T+ LI G+C +++RA LL
Sbjct: 314 EEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLL 373
Query: 465 CFAKMME---------------KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
A ME K DA ++LING+ A+ L EM+ K
Sbjct: 374 VHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-G 432
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDAS 566
+ P T+ +LI L R++EA +L + Q P F + G VE A
Sbjct: 433 IEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAF 492
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKC------PHHIRQDSKIS 617
LK + K P + + + EG+ EA+ LL + P HI ++ IS
Sbjct: 493 MLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLIS 550
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 2/228 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ +R + + +++ EM +G E TY + + M++A
Sbjct: 397 GIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEA 456
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LFE ++D P V + ++ + N ++ F + + + + ++ +
Sbjct: 457 DDLFEKILDQGVSPDVIMFNAMVDGHCA--NGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + G+ +EA ++ MK G +PD+I+Y+ +I G + G +DA V DEM G
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 574
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
P + T+ LI+ C E D A +M+ K D LI G
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
>gi|255562047|ref|XP_002522032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538836|gb|EEF40436.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 451
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 176/390 (45%), Gaps = 15/390 (3%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L + ++ V VL+ P ++L FF W + Y +I Y ++++LA+ +
Sbjct: 59 RTLNKLNAPVTSELVFRVLRACSRSPTESLRFFNW--SRAYYTPTSIEYEELIKILAKSK 116
Query: 281 SVRDFWNVVEEMKKEGYEMDI--DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
W ++ +MK + + I +T I ++ + +++ AV++F + +V
Sbjct: 117 RYSSMWKLITQMKDQNPQFSISSETVRSIIEEYGRSGLIDQAVEVFNQCNSLNCEQNVDI 176
Query: 339 CSLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ LL ++ + + LV R+ K G + +K+ Y + G+F EA+ +
Sbjct: 177 YNSLLFALCEVKLFHGAYALVRRLIRK----GLAPNKTTYSVLVNGWCSNGKFKEAQLFL 232
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ M GF P +I GL AG FE A ++ +M + G +PD+ T+ LI+ C +
Sbjct: 233 EEMSKKGFNPPVRGRDLLIEGLLNAGYFESAKEMVFKMSKEGFVPDVNTFNCLIEAICNS 292
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
EVD + + + + + D + +LI +++ A+KLL IE +P+
Sbjct: 293 GEVDFCVDMYYSLRKLGFCPDINSYKILIPAVSKVGKIDEAFKLLNNSIEDGH-KPFPGL 351
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT----VEDASEFLKAL 572
+ +I+ + + ++A MK + +PP + I+ G VE A+ ++
Sbjct: 352 YAPIIKGMCRRGQFDDAFCFFGEMKVKGHPPNRPVYTMLITMCGRGGKYVEAANYLVEMT 411
Query: 573 SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ P S + V + N G+H AK +
Sbjct: 412 EMGLTPISRCFDMVTDGLKNCGKHDLAKRI 441
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 160/408 (39%), Gaps = 38/408 (9%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E L +L+ +T E V VLR P ++ FFNW + + P+S Y +++ L
Sbjct: 58 ERTLNKLNAPVTSELVFRVLRACSRSPTESLRFFNW--SRAYYTPTSIEYEELIKILAKS 115
Query: 143 DSLKQFWVTLRRMKEDHCY--IEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
W + +MK+ + I ET SI ++E
Sbjct: 116 KRYSSMWKLITQMKDQNPQFSISSETVRSI-----------------------IEEYGRS 152
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
+ V+V ++ + +++ N +L L E++++ R +
Sbjct: 153 GLIDQAVEVF------NQCNSLNCEQNVDIY-NSLLFALCEVKLFHGAYALVRRLI--RK 203
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TY+ ++ + ++ +EEM K+G+ + + E A
Sbjct: 204 GLAPNKTTYSVLVNGWCSNGKFKEAQLFLEEMSKKGFNPPVRGRDLLIEGLLNAGYFESA 263
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ M + P V + L+ +I N+ ++ + LG + Y +
Sbjct: 264 KEMVFKMSKEGFVPDVNTFNCLIEAIC--NSGEVDFCVDMYYSLRKLGFCPDINSYKILI 321
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A++K+G+ DEA K++ G +P Y+ +I G+C+ G+F+DA EM+ G
Sbjct: 322 PAVSKVGKIDEAFKLLNNSIEDGHKPFPGLYAPIIKGMCRRGQFDDAFCFFGEMKVKGHP 381
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
P+ +T+LI + A +M E + D++ +G
Sbjct: 382 PNRPVYTMLITMCGRGGKYVEAANYLVEMTEMGLTPISRCFDMVTDGL 429
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 161/373 (43%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +TYN + L ++ V V++ M +EG++ D+ TY + K +++A
Sbjct: 295 GFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEA 354
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + L+ ++ S N + L +A + G S ++ +
Sbjct: 355 KGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL--DLARELTVKGLSPDVYTFNILI 412
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G ++ + MK++G PD +TY+ +I LC G+ +A ++L EME NGC
Sbjct: 413 NALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCP 472
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I C ++ A F +M A + LI+G KR++ A +L
Sbjct: 473 RSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATEL 532
Query: 501 LVEMIEKVRLRPWQ-----------------------------------ATFKTLIEKLL 525
+ +M+ K L+P T+ TLI L
Sbjct: 533 IEQMV-KEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC 591
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
A R + A+ LLR M+ + P P+ P +Q + + + DA S F + V E P +
Sbjct: 592 KAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDAL 651
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 652 TYKIVFRGLCRGG 664
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 185/443 (41%), Gaps = 42/443 (9%)
Query: 108 DPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY 167
DPE A N ++ F PS VY +++ L + +R M+ E +
Sbjct: 68 DPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMR-------REGH 120
Query: 168 LSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK 227
+ GV++ ++ A L +F D A+D V L G D + L ++
Sbjct: 121 EAGAGVVRSFVES--YARLRRFDD------AVDLVRNQL--NTFGVQADTAVYNHLLNVL 170
Query: 228 IELSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
E S +L +V E+ G + + +T N +++ L R VR
Sbjct: 171 AEGSRMKLLESVYNEM---------------TDRGIQPDVVTLNTLIKALCRAHQVRTAV 215
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
++EEM D T+ + + F + +E A+++ MM+ P+ ++L+
Sbjct: 216 LMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGY 275
Query: 347 SSINNPDLGLVF---RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ + L + +A+ +E + Y+ L + G A K+M M G
Sbjct: 276 CKMGRVEDALGYIQKEIADGFEP-----DQVTYNTFVHCLCQNGHVSHALKVMDLMLQEG 330
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+PD TY+ VI L K G ++A ++++M + GC+PD T+ LI C+ N ++ AL
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEAL 390
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
++ K D ++LIN + +L EM + P + T+ LI+
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEM-KSSGCAPDEVTYNILIDH 449
Query: 524 LLGARRLEEAMNLLRLMKKQNYP 546
L +L A++LL+ M+ P
Sbjct: 450 LCSMGKLVNALDLLKEMESNGCP 472
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 156/375 (41%), Gaps = 10/375 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T YN +L VLA ++ +V EM G + D+ T + + + + A
Sbjct: 155 GVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L++ I + RV K G S ++ + +
Sbjct: 215 VLMLEEMSSHAVAPDETTFTTLMQGF--IEEGSIEAALRVKTKMMETGCSPTRVTVNVLI 272
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+GR ++A ++ GFEPD +TY+ + LC+ G A V+D M + G
Sbjct: 273 NGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHD 332
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ +I E+D A +M+++ D + LI SQ R+ A L
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDL 392
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
E+ K L P TF LI L + L MK P + + ++
Sbjct: 393 ARELTVK-GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLC 451
Query: 558 KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
G + +A + LK + P S+ Y + ++ + R EA+++ + H S +
Sbjct: 452 SMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAV 511
Query: 617 ---SLLFGSAKSNKV 628
+L+ G K+ ++
Sbjct: 512 TFNTLIDGLCKAKRI 526
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 147/372 (39%), Gaps = 42/372 (11%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT L+E + P AL + + Y I++ L + +V EM++
Sbjct: 59 LLTALRE-QADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG+E + + R +DAV L
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDL------------------------------- 146
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
V N+ + G +VY+ + L + R E + M + G +PD +T + +
Sbjct: 147 -----VRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTL 201
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I LC+A + A +L+EM + PD T+T L+QG ++ AL KMME
Sbjct: 202 IKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGC 261
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
++VLING+ RV A + + I P Q T+ T + L + A+
Sbjct: 262 SPTRVTVNVLINGYCKMGRVEDALGYIQKEIAD-GFEPDQVTYNTFVHCLCQNGHVSHAL 320
Query: 535 NLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
++ LM ++ + P + +SK G +++A + + + P + + + +
Sbjct: 321 KVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVAL 380
Query: 591 FNEGRHYEAKDL 602
++ R EA DL
Sbjct: 381 CSQNRLEEALDL 392
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 163/407 (40%), Gaps = 50/407 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++ L L + + +M + C + T+ +++ L + + AL
Sbjct: 333 PDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEE--AL 390
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL-EDMKI------ELSDNFVLTVL 239
+ + VK ++ D ++ L D +G +L E+MK E++ N ++ L
Sbjct: 391 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHL 450
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ V AL + + E +G +T+TYN I+ L + + + V ++M G
Sbjct: 451 CSMGKL-VNALDLLKEM-ESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISR 508
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
T+ + K + ++DA +L E M+ +P
Sbjct: 509 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQP------------------------- 543
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
S Y+ I K G +A +++ M GFE D +TY +I GLC
Sbjct: 544 ------------SNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLC 591
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KAGR + A +L M G P K + +IQ N + AL F +M E DA
Sbjct: 592 KAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDAL 651
Query: 480 LLDVLINGFL-SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ G + A+ LVEM+ K P ++F+ L E LL
Sbjct: 652 TYKIVFRGLCRGGGPIKEAFDFLVEMVNK-GFMPEFSSFRMLAEGLL 697
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 138/329 (41%), Gaps = 20/329 (6%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF-E 325
I N + +V H +R F EEMK G D TY + + +A+ L E
Sbjct: 410 ILINALCKVGDPHLGIRLF----EEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKE 465
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+G + +V +++ + + VF ++ ++ G S S ++ + L K
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVF---DQMDAHGISRSAVTFNTLIDGLCK 522
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
R D+A ++++ M G +P NITY+ ++ CK G + A ++L+ M NG D+ T
Sbjct: 523 AKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVT 582
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ LI G C A AL M K + +I + + A L EM
Sbjct: 583 YGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMT 642
Query: 506 EKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
E V P T+K + L G ++EA + L M + + P +F +
Sbjct: 643 E-VGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP----------EFSSFRM 691
Query: 565 ASEFLKALSVKEYPSSAAYLQVFESFFNE 593
+E L L + +Y SA L + ++ F E
Sbjct: 692 LAEGLLNLGMDDYLISAIELIIEKAKFRE 720
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 101/241 (41%), Gaps = 6/241 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFEPDNITYSQVIFGLCKAGRFED 426
G+ V + +L RFD+A +++ N G + D Y+ ++ L + R +
Sbjct: 119 GHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+V +EM + G PD+ T LI+ C A++V A+L +M D L+
Sbjct: 179 LESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQ 238
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF+ + + A ++ +M+E P + T LI R+E+A+ ++ +
Sbjct: 239 GFIEEGSIEAALRVKTKMME-TGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFE 297
Query: 547 PFP---EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P FV + + G V A + + + + + P Y V G EAK +
Sbjct: 298 PDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGI 357
Query: 603 L 603
+
Sbjct: 358 V 358
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 186/434 (42%), Gaps = 26/434 (5%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P+ Y++++ L K +Q + M + + TY ++ G K A L+
Sbjct: 267 PNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALS- 325
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
+ MV + A VA T + G K+G+ + M+ +LSD +L ++ Y
Sbjct: 326 ---LQEEMVLKGASPTVA-TYNSFIYGLC---KLGRMSDAMQ-QLSDMLANNLLPDVVSY 377
Query: 246 PVKALGFFRWVGE-----------HSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMK 293
G+ R +G S Y TI TYN +L L R + + EM
Sbjct: 378 NTLIYGYCR-LGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMI 436
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
EG DI TY + K + A + F+ M+ + + + R + + D
Sbjct: 437 NEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLE--LDSYAYATRIVGELKLGD 494
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
F + + + G +Y+ + L KLG +EA ++++ M + G PD +TY+
Sbjct: 495 TSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTS 554
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I + GR + EM G P + T+T+LI GH ++RA + F++M EK
Sbjct: 555 IIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKG 614
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + LING +R++ AY EM+EK + P + ++ LI + +EA
Sbjct: 615 ILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEK-GIFPNKYSYTILINENCNMGNWQEA 673
Query: 534 MNLLRLMKKQNYPP 547
++L + M + P
Sbjct: 674 LSLYKQMLDRGVQP 687
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 156/383 (40%), Gaps = 56/383 (14%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
VL R P AL FRW G++ + + IL +LA++ +R + V+E +
Sbjct: 87 VLSSFRTSPRMALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANM 146
Query: 298 EMDIDTYIK--ISRQ------------FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+D I +S + + K M+E + +F+ M+ P V++C+ +L
Sbjct: 147 HRIVDVLIGGCVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRIL 206
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
R + + DL +SK+V ++ + M G
Sbjct: 207 RIL---RDKDL----------------MSKAV------------------EVYRTMGEFG 229
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+P +TY+ ++ CK G+ + ++L EM+ GC P+ T+ +LI G E ++A
Sbjct: 230 IKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAK 289
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+M++ A + LI G+ ++ + A L EM+ K P AT+ + I
Sbjct: 290 GLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLK-GASPTVATYNSFIYG 348
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL-SVKEYPS 579
L R+ +AM L M N P + I + G + A L S+ +P+
Sbjct: 349 LCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPT 408
Query: 580 SAAYLQVFESFFNEGRHYEAKDL 602
Y + + +G A+ L
Sbjct: 409 IVTYNTLLDGLCRQGELEVAQQL 431
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 137/341 (40%), Gaps = 20/341 (5%)
Query: 259 HSGYKHNTITY-NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
H G + ++ Y I+ L ++ R F ++ EEM +G+ D+ Y + K +
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAF-SLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530
Query: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV- 375
E+A +L + M+ DG V S++ + + +F YE L L+ SV
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIF-----YEMLSKGLTPSVV 585
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + GR + A M+ G P+ ITY+ +I GLCK R + A N EM
Sbjct: 586 TYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEM 645
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G P+ ++TILI +C AL + +M+++ D+ L+ ++
Sbjct: 646 VEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
+ KV L T L + E ++ + +QN P F +P
Sbjct: 706 QAVHGTSTMPTAKVDLLSQTVGAAT---ALTSVSSIAENGHITKEQLRQNIPTKKQFVDP 762
Query: 552 FVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
+ Q + VE + + + ++ Y ES N
Sbjct: 763 YRQGL----IVEGGVGYSQTVVIRSYEVGPDKTATLESILN 799
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 168/382 (43%), Gaps = 39/382 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ ++ T+N ++ L RH + +V+ M +G + D+ TY + K ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK--------YESLGNS 370
+ L + M G +P V + ++ ++ + N + L L + NK Y SL
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 371 L---------SKSVYDGIHR--------------ALTKLGRFDEAEKMMKAMKNAGFEPD 407
L S+ + D I R A K G+ EAEK+ M +PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TYS +I G C R ++A ++ + M C P++ T+ LI+G C A VD + F
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M ++ + LI+GF + + A + +M+ L P T+ L++ L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNN 479
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAY 583
++E A+ + +++ P + ++ + K G VED + +LS+K P+ Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 584 LQVFESFFNEGRHYEAKDLLYK 605
+ F +G EA D L++
Sbjct: 540 TTMMSGFCRKGLKEEA-DALFR 560
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 42/326 (12%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + S LL +I+ +N DL V + + ++LG S + Y
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL--VISLGEQMQNLGISHNLYTY 119
Query: 377 D----------------GIHRALTKLG-------------------RFDEAEKMMKAMKN 401
+ + KLG R +A ++ M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G++PD+ T++ +I GL + R +A ++D M GC PD+ T+ I++ G C ++D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AL KM + + + + +I+ + K VN A L EM K +RP T+ +LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLI 298
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY- 577
L R +A LL M ++ P F I F G + +A + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P Y + F R EAK +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMF 384
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ D G+ +FR ++ +GN+++ Y +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT---YTTLIHGF 441
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G PD +TYS ++ GLC G+ E A V + ++ + PDI
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + +++GF + A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E+ L P T+ TLI L + L+R M+
Sbjct: 562 MKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 107/447 (23%), Positives = 192/447 (42%), Gaps = 30/447 (6%)
Query: 115 FFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
+FN + DK F P S ++ +L +V S Q+W C+ E +L V
Sbjct: 116 YFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWW----------CFFNESKIKVVLDVY 164
Query: 175 KKA---KKASDLAALNQFHDGMV--KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
K + + + D +V +E ++ G +I +K +D+ E
Sbjct: 165 SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEI-EKAKDLFFE 223
Query: 230 L------SDNFVLTVL-KELRIYPVKALGF--FRWVGEHSGYKHNTITYNGILRVLARHE 280
+ ++ + TVL L +K GF + + EH G N TYN ++ L +
Sbjct: 224 MGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEH-GVFPNLHTYNCVMNQLCKDG 282
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
+D + V +EM++ G +I TY + + +A ++ + M P++ +
Sbjct: 283 RTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYN 342
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
L+ + LG + +S G S S Y+ + K G A K++K M+
Sbjct: 343 TLIDGFCGVRK--LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +P +TY+ +I ++ E A + MEE G PD+ T+++LI G C ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A F M+EK ++ + + + ++ G+ + A +L EM EK L P A+++ +
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEK-ELPPNVASYRYM 519
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
IE L R+ +EA L+ M P
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S + +Y + K G ++A+ + M G + TY+ +I GL K G +
Sbjct: 192 FGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ ++M+E+G P++ T+ ++ C A F +M E+ + + LI
Sbjct: 252 GFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + N A +++ +M + + P T+ TLI+ G R+L +A++L R +K +
Sbjct: 312 GLCREMKANEANEVMDQM-KSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLS 370
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
P + +S F G A + +K + + PS Y + ++F
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTF 418
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N ITYN ++ + ++ ++K G + TY + F K A
Sbjct: 333 GINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K+ + M + KPS ++L+ + + +N + + R + E LG + Y +
Sbjct: 393 GKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR--SSMEELGLTPDVHTYSVLI 450
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
GR +EA ++ K+M FEP+ + Y+ ++ G CK G A + EMEE
Sbjct: 451 HGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
P++ ++ +I+ C + A KM++ +L+++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SGY+ N +T+N I+ + + + + + +GY D TY + K ++
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A+ L + M +P++ S L+ + + LGL ++ + G L Y+
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGER----GILLDAVTYN 234
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +GR+ E +++ M +PD+ T++ +I LCK GR +A VL M +
Sbjct: 235 SLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKR 294
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PDI T+ L++G+C+ V A F +M+++ + D +VLI+G+ K V+ A
Sbjct: 295 GEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEA 354
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L E+ K L P A++ +LI+ L + R+ LL M PP
Sbjct: 355 MVLFKELCNK-NLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 140/321 (43%), Gaps = 46/321 (14%)
Query: 232 DNFVLTVL-----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
D++ +L KE RI ++A G + + G K + +TYN ++ E+V +
Sbjct: 264 DDYTFNILIDALCKEGRI--LEAQGVLAMMSKR-GEKPDIVTYNALMEGYCSRENVHEAR 320
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ M K G E D+ Y + + K +M+++A+ LF+ + + P++
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIA--------- 371
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
Y SL + L S GR +K++ M + P
Sbjct: 372 ----------------SYNSLIDGLCNS------------GRISHVKKLLDEMHGSAQPP 403
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D +TY+ +I LCK GR +A VL M + G P+I T+ ++ G+C N V+ A F
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M++ + D +VLING+ + V+ A L EM K L P A++ +LI+ L
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHK-NLIPDIASYNSLIDGLCN 522
Query: 527 ARRLEEAMNLLRLMKKQNYPP 547
R+ LL M P
Sbjct: 523 LGRIPHVQELLDEMCDSGQSP 543
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 148/329 (44%), Gaps = 24/329 (7%)
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-KE 241
+A+ N DG+ + +V K L+D + GS + ++ N ++ L KE
Sbjct: 370 IASYNSLIDGLCNSGRISHVKK-LLDEMHGSAQPPDV----------VTYNILIDALCKE 418
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
RI ++ALG + + G K N +TYN ++ +V ++ M K G E DI
Sbjct: 419 GRI--LEALGVLVMMMK-KGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDI 475
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
Y + + K M+++A+ LF+ M P + + L+ + +LG + V
Sbjct: 476 LNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLC-----NLGRIPHVQ 530
Query: 362 NKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ + G S Y+ + A K FD+A + + + G PD T ++ L
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK + + A + L + +GC P+++T+TILI C A+L +KM + + DA
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+++I L + + A KL EMI +
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIAR 678
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 12/284 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKLFEF 326
+YN ++ L + +++EM D+ TY I I ++ R++E A+ +
Sbjct: 372 SYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILE-ALGVLVM 430
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MM KP++ + ++ NN + + + N+ G Y+ + K
Sbjct: 431 MMKKGVKPNIVTYNAMMDGYCLRNN--VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKT 488
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
DEA + K M++ PD +Y+ +I GLC GR +LDEM ++G PD+ T+
Sbjct: 489 EMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITY 548
Query: 447 TILIQGHCAANEVDRALLCFAKMME---KNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
IL+ C D+A+ F +++E ++ + ++D L G + + LL+
Sbjct: 549 NILLDAFCKTQPFDKAISLFRQIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMH 608
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P T+ LI L EAM LL M+ + PP
Sbjct: 609 -----GCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 11/223 (4%)
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D+A M P + +++ + + G + A ++ +++ G P I T+TIL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I + + A A +++ Y + + +INGF +NG ++ + +
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFC----INGMIFKALDFCQNLL 152
Query: 510 LRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
+ + Q T+ TLI L +++ A++LL+ M+K + P + + K G V
Sbjct: 153 AQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVS 212
Query: 564 DASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLLYK 605
DA + + A Y + + + GR E LL K
Sbjct: 213 DALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTK 255
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 16/379 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N T+ ++ L+R + +M +G TY + Q E A
Sbjct: 337 GCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETA 396
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F++M+ PS Q + +++ + + +V + +K G+S + Y+ +
Sbjct: 397 FTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV--IFDKMLKAGSSPNVITYNTLI 454
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G + A ++++ MK G +PD TY+++I G + G+ E A ++ M E+G
Sbjct: 455 YGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGIS 514
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+T +I G+ +VD AL F KM+E + +V+I+GF ++ A
Sbjct: 515 PNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF 574
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-----VQY 555
+M+ K L P T+ + I+ L R A + M+K+NY FP + +
Sbjct: 575 CGKMV-KQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY--FPNLYTYSSLIYG 631
Query: 556 ISKFGTVEDASEFLKALSVKEY---PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
+ + G EDA + + Y P+ Y + + EGR YEA L+ Q
Sbjct: 632 LCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQ 691
Query: 613 DSK---ISLLFGSAKSNKV 628
S+ +LL G K+ KV
Sbjct: 692 PSEEIYRALLIGECKNLKV 710
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 237/605 (39%), Gaps = 91/605 (15%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR-------------- 126
E ++L LSPKL VV +L+ N + FF W+ +K F+
Sbjct: 64 EHSSELCHLSPKLKPHHVVNILQTHKNT-DSVLRFFFWISRRKFFKHDMSCFVSMLNRLV 122
Query: 127 ------PSSTVYSLMLRNLVNKDSLKQFWVTLRRM--KEDHCY--IEEETYLSILGVLKK 176
P+ V LM+++ N+ +K+ L + K D Y T L LG
Sbjct: 123 RDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDM 182
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
A D+ + + G+ + N T+++++ K G+ +++ K+ +S F
Sbjct: 183 VDLARDMY-IKMLNSGIRPSLLTFN---TMINILC------KKGR-VQEAKLIMSHIFRY 231
Query: 237 TVLKELRIYPVKALG-------------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
Y LG F R V + G N++TY+ ++ L +
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLE 289
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ +++EEM ++G E + TY +AV+L M P++Q + L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349
Query: 344 RSISSINNPDL-----------GLV------------FRVANKYE----------SLGNS 370
+S ++ GLV V ++E S G+
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
S Y+ I + +G +A + M AG P+ ITY+ +I+G CK G +A +
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L+ M+ NG PD T+T LI G +++ A F MME + +I+G+ +
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+V+ A L +M+E L P T+ +I + EA N M KQ P
Sbjct: 530 LAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588
Query: 551 PFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK--DLLY 604
+ +I G A + + + Y P+ Y + EGR +A+ +LL
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648
Query: 605 KCPHH 609
+ H+
Sbjct: 649 RLTHY 653
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 174/436 (39%), Gaps = 18/436 (4%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+S YS ++ L ++ L++ L M + IE Y + ++ A+
Sbjct: 270 PNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKG--IEPTVYTYTIPLVSLCDAGCSSEAV 327
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT------VLK 240
+ M K + N+ +T ++ G D K + L+D V T ++
Sbjct: 328 -ELLGKMKKRGCVPNI-QTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 241 ELRIYPV--KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+L + A F+W+ H G +T TYN I++ ++ + ++M K G
Sbjct: 386 QLCVEGRFETAFTIFKWMLSH-GSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSS 444
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ TY + + K + +A++L E M KP + L+ S L
Sbjct: 445 PNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS--RGGKLEHAT 502
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ G S + Y I L + D+A + M +G P + TY+ +I G
Sbjct: 503 SLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGF 562
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
K +A N +M + G +P++ T+T I G C A F +M ++NY +
Sbjct: 563 SKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNL 622
Query: 479 DLLDVLINGFLSQKRVNGA--YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
LI G + R A Y LL + P T+ TL++ L G R EA L
Sbjct: 623 YTYSSLIYGLCQEGRAEDAEMYNLLARLTH-YGCEPNVDTYTTLVKGLCGEGRCYEADQL 681
Query: 537 LRLMKKQNYPPFPEPF 552
+ M+K+ P E +
Sbjct: 682 VVSMQKKGLQPSEEIY 697
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 5/288 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + TY ++ +R + ++ M + G + TY I + ++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ LF M++ PS Q ++++ S N+ F K G + Y
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF--CGKMVKQGLLPNVITYTSF 593
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA--CNVLDEMEEN 437
L + GR A K+ M+ + P+ TYS +I+GLC+ GR EDA N+L +
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P++ T+T L++G C A M +K ++ L+ G +V A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ M + + + + +K LI L +EEA + + M ++++
Sbjct: 714 LNIFYSM-DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 112/253 (44%), Gaps = 1/253 (0%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F W SG ++ TYN ++ ++ S+ + N +M K+G ++ TY
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ A K+F M Y P++ S L+ + + ++ + + G
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y + + L GR EA++++ +M+ G +P Y ++ G CK + E A
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N+ M+ G + + LI C N ++ A F M+EK++++D + VL++G
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGL 774
Query: 489 LSQKRVNGAYKLL 501
L + + KLL
Sbjct: 775 LKEGETDLCLKLL 787
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 20/305 (6%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD----FWNVVEEMKKEGYEMDIDTY 304
A F + EH G N +TY I+ V D FW +VE G TY
Sbjct: 501 ATSLFYGMMEH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES----GNLPSSQTY 555
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ F K + +A M+ P+V + + + N GL F++ ++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC--RNGRTGLAFKIFHEM 613
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAE--KMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
E + Y + L + GR ++AE ++ + + G EP+ TY+ ++ GLC G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R +A ++ M++ G P + + L+ G C +V+ AL F M +
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRL 539
LI + + A + M+EK W + + L++ LL + + LL +
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLEK----HWNSDEVVWTVLLDGLLKEGETDLCLKLLHV 789
Query: 540 MKKQN 544
M+ +N
Sbjct: 790 MESRN 794
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 4/194 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRD--FWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
E Y N TY+ ++ L + D +N++ + G E ++DTY + +
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+A +L M +PS + LL I N + + ++LG L S
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALL--IGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + AL K +EA+ + + M + D + ++ ++ GL K G + +L ME
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVME 791
Query: 436 ENGCIPDIKTWTIL 449
C + +T+ +L
Sbjct: 792 SRNCTLNFQTYVML 805
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 150/344 (43%), Gaps = 9/344 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TYN ++ + +R+ N+ + MKK G + I+TY + + K M++AVKL+
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459
Query: 325 -EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+G +KP+V L+R I D + + ++ + G S + Y+ + +
Sbjct: 460 SEMPMEG-FKPNVVTYITLMRGY--IAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGI 516
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ R E + M+K+ + GF P +TY+ +I G KAG A V +M E G P+I
Sbjct: 517 CMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNI 576
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T I G+C D AL + + D + LINGF + ++ A +LLV
Sbjct: 577 ITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVI 636
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
++ K L P + +LI ++E M K + I F G
Sbjct: 637 LL-KDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDG 695
Query: 561 TVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
V A E + K Y P + + + G AK LL
Sbjct: 696 NVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 138/320 (43%), Gaps = 10/320 (3%)
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
AR S +D + EM+ GY +D + + K M EDAV+LF+ M P
Sbjct: 168 ARGSSAKDALALFMEMRGRGYRVDAWMFDALMSACLKEGMHEDAVRLFDEMPGAEIDPDQ 227
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ +L + ++ + D G R+ + + +G Y + L K GR +EA ++
Sbjct: 228 RVYALAITALCKLG--DGGRALRMLREMKEVGFDTCDFTYRTMVDVLVKTGRMEEALRVN 285
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M++AG + D I + ++ G C +A N+ E ++G +P + +LI+G
Sbjct: 286 DEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQV 345
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+A +M + L +++ G L+ +R A L EM + P T
Sbjct: 346 GMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG--LPDVFT 403
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFLKAL 572
+ LI A +L EA+NL MKK P + + Y K G +++A + +
Sbjct: 404 YNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK-GCMDEAVKLYSEM 462
Query: 573 SVKEY-PSSAAYLQVFESFF 591
++ + P+ Y+ + +
Sbjct: 463 PMEGFKPNVVTYITLMRGYI 482
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 166/397 (41%), Gaps = 48/397 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL R + E G+ TY ++ VL + + + V +EM+ G +MD+ +
Sbjct: 245 RALRMLREMKE-VGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTL 303
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R + + + +A+ LF+ + P+ +L+R + G+ + +
Sbjct: 304 MRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQV-----GMTQKAYELCRQM 358
Query: 368 -GNSLSKSVYDG--IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G L S ++ + + L R+ +A + + M ++G PD TY+ +I C+A +
Sbjct: 359 TGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKL 417
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ D M++ G P I T+ L+ G+C +D A+ +++M + + + L
Sbjct: 418 REALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITL 477
Query: 485 INGFLSQKRVNGAYKLLVE---------------------MIEKV-------------RL 510
+ G++++K + AY LL E M+++V
Sbjct: 478 MRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGF 537
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
P T+ ++I + A + A + + M+++ PP + +I + + LK
Sbjct: 538 IPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALK 597
Query: 571 ALS-VKE---YPSSAAYLQVFESFFNEGRHYEAKDLL 603
L+ V+ P AY + F EG A LL
Sbjct: 598 MLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLL 634
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/430 (21%), Positives = 165/430 (38%), Gaps = 41/430 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKED------------HCYIEEETYLSILGVL 174
PS+ SL+L+ L+N K M + H + + L +
Sbjct: 365 PSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLF 424
Query: 175 KKAKKASDLAALNQFHD---GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS 231
+ KKA ++N ++ G K+ MD K +M +E
Sbjct: 425 DRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY-----------------SEMPMEGF 467
Query: 232 DNFVLTVLKELRIYPVK-----ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
V+T + +R Y K A + + +G N TYN ++ + + V +
Sbjct: 468 KPNVVTYITLMRGYIAKKDFDNAYALLDEM-KQNGVSCNDYTYNVLINGICMVDRVCEVD 526
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+++ EG+ + TY I F K MM A +++ M + P++ + +
Sbjct: 527 GMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGY 586
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
D+ L ++ N G Y+ + + G A +++ + G P
Sbjct: 587 CRTGCSDMAL--KMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAP 644
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ + Y+ +I G ++ + M + G + D T+T LI G V AL +
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++MM K Y DA L +G ++GA KLL EM ++ +RP + LI L
Sbjct: 705 SEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEM-RRLDVRPNVFIYNMLINGYLR 763
Query: 527 ARRLEEAMNL 536
+L+EA L
Sbjct: 764 DCKLQEAFRL 773
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 114/263 (43%), Gaps = 3/263 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +TYN I+ + + + V ++M+++G +I TY + + + A
Sbjct: 536 GFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMA 595
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+ + +P + + L+ N L V + L + + VY+ +
Sbjct: 596 LKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGL--APNTVVYNSLI 653
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L E K ++M G D TY+ +I G K G A + EM G I
Sbjct: 654 TGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYI 713
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T+T L G C + ++D A +M + + + ++LING+L ++ A++L
Sbjct: 714 PDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRL 773
Query: 501 LVEMIEKVRLRPWQATFKTLIEK 523
EM+ + ++P T+ L+ K
Sbjct: 774 HDEML-NMGIQPDDTTYDILVSK 795
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 146/324 (45%), Gaps = 14/324 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++R L + ++ + + M +G D TY I + K M+++A +L
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316
Query: 325 EFMMDGPYKPSVQD----CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ D +K V D CSL+ + D+ + N+ ++ G VY+ +
Sbjct: 317 K---DAVFKGFVPDQVTYCSLINGLCAE---GDVERALELFNEAQAKGIKPDIVVYNSLV 370
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L G A ++M M G PD TY+ VI GLCK G DA V+++ G +
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 430
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G+C ++D AL +M E D + ++NG +VN +
Sbjct: 431 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 490
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EMI K P T+ LIE + ++EEA ++ M ++ P F I F
Sbjct: 491 FQEMILK-GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFC 549
Query: 560 --GTVEDASEFLKALSVKEYPSSA 581
G +E A + L K Y ++A
Sbjct: 550 RNGDLEGAYLLFQKLEEKGYSATA 573
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 183/438 (41%), Gaps = 46/438 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ ++R L K ++ LRRM C ++ TY +I+ K + L
Sbjct: 256 PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATEL 315
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
D + K D V T ++ G + + + LE + E
Sbjct: 316 --LKDAVFKGFVPDQV--TYCSLINGLCAEGDVERALE-------------LFNE----- 353
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+ G K + + YN +++ L + V+ EM +EG DI TY
Sbjct: 354 ----------AQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNI 403
Query: 307 ISRQFQKFRMMEDA-VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K + DA V + + +M G Y P V + L+ D L ++ +
Sbjct: 404 VINGLCKMGNISDATVVMNDAIMKG-YLPDVFTFNTLIDGYCKRLKLDSAL--QLVERMW 460
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L K G+ +E + + M G P+ ITY+ +I C++ + E
Sbjct: 461 EYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKME 520
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V+ +M + G PD ++ LI G C +++ A L F K+ EK Y A AD + LI
Sbjct: 521 EASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLI 580
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA-MNLLRLMKKQN 544
F + ++ A K+ EM+ K R T++ LI+ ++ A M+L+ ++KK
Sbjct: 581 GAFSGKLNMHMAEKIFDEMLSKGH-RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKG- 638
Query: 545 YPPFPEPFVQYISKFGTV 562
F+ +S FG V
Sbjct: 639 -------FIPSMSTFGRV 649
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 122/264 (46%), Gaps = 9/264 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-DLGLVFRVANKYESLGNSLSKSVY 376
DA +LF+ M+ P++ + +L ++ + + GL+ K G S++ Y
Sbjct: 171 HDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLL---GKVIQRGMSINLFTY 227
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ R L + GR EA +++ M+ A PD +TY+ +I GLCK ++A + L M
Sbjct: 228 NIWIRGLCEAGRLPEAVRLVDGMR-AYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN 286
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC+PD T+ +I G+C + V A + K + D LING ++ V
Sbjct: 287 QGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVER 346
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A +L E K ++P + +L++ L + A+ ++ M ++ P + + +
Sbjct: 347 ALELFNEAQAK-GIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVI 405
Query: 554 QYISKFGTVEDASEFLKALSVKEY 577
+ K G + DA+ + +K Y
Sbjct: 406 NGLCKMGNISDATVVMNDAIMKGY 429
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 162/403 (40%), Gaps = 42/403 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ D E+A FN K +P VY+ +++ L + + + M E+ C+ + +
Sbjct: 341 EGDVERALELFNEA-QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 399
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE- 224
TY ++ L K SD + +D ++K L DV + D K+L+
Sbjct: 400 TYNIVINGLCKMGNISDATVV--MNDAIMK--------GYLPDVFTFNTLIDGYCKRLKL 449
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
D ++L + W G +TITYN +L L + V +
Sbjct: 450 DSALQLVERM--------------------W---EYGIAPDTITYNSVLNGLCKAGKVNE 486
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+EM +G + TY + F + ME+A K+ M P + L+
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N DL + + K E G S + ++ + A + AEK+ M + G
Sbjct: 547 GFC--RNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGH 604
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D+ TY +I G CK + A L EM + G IP + T+ +I + V +A+
Sbjct: 605 RADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVG 664
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M++ +++D ++N + K+ A K+LVE + K
Sbjct: 665 IIHIMVK--IGVVPEVVDTILN---ADKKEIAAPKILVEDLMK 702
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 113/314 (35%), Gaps = 43/314 (13%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R AR +RD + E M Y I + A K++ M+
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P + ++ LRS P + L R+ G +V G++ G
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIAL--RLLRALPHRGAVAYCTVVCGLYAH----GH 169
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK---------------------------- 420
+A ++ M + P+ +++V+ LCK
Sbjct: 170 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 229
Query: 421 -------AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
AGR +A ++D M +PD+ T+ LI+G C + A+ +MM +
Sbjct: 230 WIRGLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 288
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D + +I+G+ V A +LL + + K P Q T+ +LI L +E A
Sbjct: 289 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFK-GFVPDQVTYCSLINGLCAEGDVERA 347
Query: 534 MNLLRLMKKQNYPP 547
+ L + + P
Sbjct: 348 LELFNEAQAKGIKP 361
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 217/540 (40%), Gaps = 27/540 (5%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S+ + N + +L ES V K D + FF+ + + F+ +++ Y +M+
Sbjct: 24 SNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIER 83
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIA 198
L + + L++MK D E+ ++ I+ K+ A AL F+ + E
Sbjct: 84 LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ--ALKMFYR--IGEFG 139
Query: 199 MDNVAKT---LVDVVLGSDWDDKIGKKLEDMKIE--LSDNFVLTVLKELRIYPVKALGFF 253
+ L+D +L + I +MK + + + F +L + +
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199
Query: 254 RWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG--YEMDIDTYIKISR 309
+ E S G + +TY ++ L + + D + K Y ID K R
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+E A+KL MMD P+V S ++ S+ N +L F + + G
Sbjct: 260 -------IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA--FALFAQMFLRGC 310
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ + + + G+ EA + K M G EP+ + Y+ +I GLC G E+A
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
V D+M+ +GC+P++ T++ILI G + ++ A + +M+ + +++
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ A LVE + P TF T I+ L G R+E AM LL M+ P
Sbjct: 431 KNSMFDQANS-LVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 550 EPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + + + E+A + + + P+ Y V F G EA L K
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 188/466 (40%), Gaps = 49/466 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K P+ Y+++L+ L D + M C + TY +++ L KA K
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 182 DLAAL-----------NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK-------IGKKL 223
D L N DGM KE ++ VA L+ ++ + D I
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIE-VAIKLLGEMMDNGVDPNVVSYSCIINSLC 290
Query: 224 EDMKIELSDNFVLTVLKELR--------IYPVKALGFFR---------W-VGEHSGYKHN 265
+EL+ F L LR P+ F R W + G + N
Sbjct: 291 VSGNVELA--FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+ YN ++ L + S+ + V ++M++ G ++ TY + F K + A + +
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M+ +P+V + ++ + N + K G + + ++ + L
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCK--NSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCG 466
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR + A K+++ M+ G P+ TY++++ L + ++E+A + E+E P++ T
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ++ G A + AL F K + + D+ + +I+ + Q +V K+ +++
Sbjct: 527 YNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV----KIAAQLV 582
Query: 506 EKV-RLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
E+V ++ W T+ +LI +EEAM L Q P
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 133/328 (40%), Gaps = 39/328 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+ ++ L + SL++ +M+ C TY SIL + K+ DL
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY-SIL--IDGFAKSGDLVGA 403
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
++ + M+ NV +VDV+ + D+ +E M +E
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE--------------- 448
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
G NT+T+N ++ L + V ++E M+ G +I TY
Sbjct: 449 ----------------GCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
++ + E+A LF+ + +P++ + +L S +G ++ K
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM--MGEALQLFGKA 550
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGR 423
G + Y+ + A K G+ A ++++ + + + PD ITY+ +I+G C
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQ 451
E+A LD+ G P+ TW L++
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVR 638
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TY ++ VL ++ ++VE+M EG + T+ + +E A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWA 473
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KL E M P++ + LL ++ +N + F + + E+ + Y+ +
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA--FGLFQEIEARNLQPNLVTYNTVL 531
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE---MEEN 437
++ G EA ++ G PD+ITY+ +I CK G+ + A +++ M+E
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
PDI T+T LI G C ++ A+ K + + + + L+ F G
Sbjct: 592 H--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGP 649
Query: 498 YKLLVEMIEK 507
+L +++ K
Sbjct: 650 IHILDDILRK 659
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 159/355 (44%), Gaps = 20/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + +N++ +M++ E + Y I K++ M+DA
Sbjct: 11 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 70
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF+ M +P+V S L+ + + R ++ L + + + +
Sbjct: 71 LNLFKEMETKGIRPNVVTYSSLISCLCNYG--------RWSDASRLLSDMIERKINPDVF 122
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +P +TYS +I G C R ++A + + M
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C PD+ T+ LI+G C V+ + F +M ++ + ++LI G
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 242
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A ++ EM+ + P T+ TL++ L +LE+AM + +++ P +
Sbjct: 243 DMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 301
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G VED + LS+K P AY + F +G EA D L+K
Sbjct: 302 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFK 355
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T++ ++ + + + + +EM K + I TY + F +++A ++F
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G+ VFR ++ +GN+++ Y+ + + L
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT---YNILIQGL 236
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+++ K M + G P+ +TY+ ++ GLCK G+ E A V + ++ + P I
Sbjct: 237 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 296
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K D + +I+GF + A L E
Sbjct: 297 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 356
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P + TLI L E + L++ M+ +
Sbjct: 357 MKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 397
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 151/359 (42%), Gaps = 43/359 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F+ + E G + N +TY+ ++ L + D ++ +M + D+ T+ +
Sbjct: 70 ALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI 128
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F K + +A KL++ M+ PS+ Y SL
Sbjct: 129 DAFVKEGKLVEAEKLYDEMVKRSIDPSIV-------------------------TYSSLI 163
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
N +H R DEA++M + M + PD +TY+ +I G CK R E+
Sbjct: 164 NGFC------MHD------RLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 211
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
V EM + G + + T+ ILIQG A + D A F +M+ + + L++G
Sbjct: 212 EVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGL 271
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
++ A ++ E +++ ++ P T+ +IE + A ++E+ +L + + P
Sbjct: 272 CKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 330
Query: 549 PEPFVQYISKF---GTVEDASEFLKALSV-KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS F G+ E+A K + P+S Y + + +G + +L+
Sbjct: 331 VVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELI 389
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M G +PD +TY V+ GLCK G + A N+L++ME+ P + + +I G C
Sbjct: 3 LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+D AL F +M K + LI+ + R + A +LL +MIE+ ++ P
Sbjct: 63 KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDV 121
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKA 571
TF LI+ + +L EA L M K++ P + I+ F +++A + +
Sbjct: 122 FTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF 181
Query: 572 LSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K +P Y + + F R E ++
Sbjct: 182 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKL 323
+ +TYN +++ +++ V + V EM + G + TY I I FQ + A ++
Sbjct: 190 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEI 248
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---YDGIH 380
F+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 249 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQRSKMEPTIYTYNIMI 303
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K G+ ++ + + G +PD + Y+ +I G C+ G E+A + EM+E+G +
Sbjct: 304 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 363
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + LI+ + + + +M + DA + ++ N
Sbjct: 364 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 409
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 167/371 (45%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + YN ++ L +++ V + + + ++G TY + K + E +
Sbjct: 260 NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVM 319
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M++ + P+ S L+ + + F + N+ + +G S VY+ + +L
Sbjct: 320 DEMIELGFVPTEAALSSLVEGLR--RKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLC 377
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G+FDEAE + K M G +++TYS +I C+ G+ + A + L +M G +
Sbjct: 378 KDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVY 437
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI GHC + A+ F +M++K LI+G+ ++ +++ A++L EM
Sbjct: 438 PYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEM 497
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGT 561
K + P TF TLI L A R+ +A L M +QN P + ++ K G
Sbjct: 498 TGK-GIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGN 556
Query: 562 VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK---DLLYKCPHHIRQDSKIS 617
A E L + K P + Y + S + GR EAK D L++ + + +
Sbjct: 557 TVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSA 616
Query: 618 LLFGSAKSNKV 628
LL G K ++
Sbjct: 617 LLHGYCKEGRL 627
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 103/483 (21%), Positives = 189/483 (39%), Gaps = 90/483 (18%)
Query: 224 EDMKIELSDNFVLTVLKELRIYPVK---------ALGFFRWVGEHSGYKHNTITYNGILR 274
E KI +D F+ T LK + V AL FF ++G H + H+T+++ ++
Sbjct: 54 ESWKIAFNDPFISTKLKPHHVEKVLLLTLDDTRLALRFFNFLGLHKNFNHSTMSFCILIH 113
Query: 275 VLAR-------------------------HESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
L E++ D + + + G+++ I +Y++ R
Sbjct: 114 ALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKR 173
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
F D+V +F M P V+ +L ++ I D+ LV + + S+G
Sbjct: 174 MF-------DSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLV--LFGEILSMGI 224
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA--------------------------- 402
+Y + R+ +L F +A++M++ M+++
Sbjct: 225 RPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIK 284
Query: 403 ------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
G +TY ++ GLCK FE V+DEM E G +P + L++G
Sbjct: 285 NGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRK 344
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+V A ++ + + + LIN + + A L EM EK L T
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEK-GLCANDVT 403
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALS 573
+ LI+ +L+ A++ L M P+ I+ K G + A F +
Sbjct: 404 YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI 463
Query: 574 VKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAKSN 626
K P+ +Y + + N+G+ +EA L ++ P+ + IS LF ++N
Sbjct: 464 DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALF---RAN 520
Query: 627 KVT 629
++T
Sbjct: 521 RMT 523
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 143/346 (41%), Gaps = 6/346 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K ++Y ++ + + + + EM +G + T+ + + M DA
Sbjct: 466 GLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDA 525
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M++ P+ ++++ N F + N+ G Y +
Sbjct: 526 FRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKA--FELLNQMVQKGLVPDTYTYRPLI 583
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L GR EA+K + + F+ + + YS ++ G CK GR DA V EM + G
Sbjct: 584 SSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVD 643
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ + +LI G + M ++ D + +I+G+ V A+ +
Sbjct: 644 MDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGI 703
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP---FVQYIS 557
MI++ P T+ TLI +L A +++A L + M N P F+ +++
Sbjct: 704 WDIMIDE-GCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLA 762
Query: 558 KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G++E A + + ++ +Y + F GR EA LL
Sbjct: 763 REGSMEKAVQLHNDMLKGLLANTVSYNILVRGFCKLGRVEEATKLL 808
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 158/390 (40%), Gaps = 43/390 (11%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ +GE G N +TY+ ++ R + + + +M G ++ + Y +
Sbjct: 388 LFKEMGE-KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGH 446
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + AV F+ M+D KP+V + L+ N L FR+ ++ G +
Sbjct: 447 CKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYC--NKGKLHEAFRLYHEMTGKGIAP 504
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + + AL + R +A ++ M P+ +TY+ +I G CK G A +L
Sbjct: 505 NTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELL 564
Query: 432 DEMEENGCIPDIKT-----------------------------------WTILIQGHCAA 456
++M + G +PD T ++ L+ G+C
Sbjct: 565 NQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKE 624
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ AL +M+++ D D VLI+G + ++ + + LL M ++ RLRP +
Sbjct: 625 GRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQ-RLRPDKVI 683
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--GTVEDASEFL--KAL 572
+ ++I+ A +++A + +M + P + I++ + D +E L + L
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEML 743
Query: 573 SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P+ Y + EG +A L
Sbjct: 744 VSNSTPNHVTYCCFLDHLAREGSMEKAVQL 773
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 121/297 (40%), Gaps = 39/297 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
EH +K N + Y+ +L + +RD V EM K G +MD+ Y + K +
Sbjct: 605 EH--FKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDT 662
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
L + M D +P + ++ S + + F + + G + + Y
Sbjct: 663 SAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGS--VKKAFGIWDIMIDEGCTPNIVTYT 720
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY-------------------------- 411
+ L K G D+AE + K M + P+++TY
Sbjct: 721 TLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKG 780
Query: 412 --------SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ ++ G CK GR E+A +LDEM +N PD T++ +I C +D A+
Sbjct: 781 LLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAI 840
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+ M+ K D + LI G + A++L +MI + ++P QAT K+L
Sbjct: 841 EFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRR-GVKPNQATHKSL 896
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 71/188 (37%), Gaps = 38/188 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY L LAR S+ + +M K G + +Y + R F K +E+A KL
Sbjct: 750 NHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLL 808
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+D P DC + S +Y R
Sbjct: 809 DEMIDNAIFP---DCI-----------------------------TYSTIIYQCCRR--- 833
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G D A + M N G +PD + Y+ +I+G C AG A + D+M G P+
Sbjct: 834 --GNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQA 891
Query: 445 TWTILIQG 452
T L G
Sbjct: 892 THKSLSHG 899
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 108 bits (270), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 149/307 (48%), Gaps = 12/307 (3%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
VLK++ Y ALGFF W+ G+KH+ TY ++ L R + +++EM K+G
Sbjct: 322 VLKQMDNY-ANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGC 380
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLG 355
+ + TY ++ + + + +A+ +F+ M + +P V C+L+ + + + L
Sbjct: 381 KPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGF----LD 436
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ + + ++ G S Y I L K G A ++ M G P+ +T++ +I
Sbjct: 437 IAMDMYQRMQAAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMI 496
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKN 473
KA +E A + +M+ G PD T++I+++ GHC ++ A FA+M KN
Sbjct: 497 ALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF--LEEAEGVFAEMQRKN 554
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ D + +L++ + V A++ EM+ LRP T +L+ L R+ EA
Sbjct: 555 WVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLH-AGLRPNVPTCNSLLSTFLRVHRMSEA 613
Query: 534 MNLLRLM 540
NLL+ M
Sbjct: 614 YNLLQSM 620
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 111/249 (44%), Gaps = 15/249 (6%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
++ I R+F+ E+A+ F F MD + +L+ + + N LG + +
Sbjct: 287 VENVSGILRRFKWGHAAEEALHNFGFRMD------AYQANQVLKQMDNYANA-LGFFYWL 339
Query: 361 ANK--YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ ++ G++ + V + L + +F +++ M G +P+ +TY+++I
Sbjct: 340 KRQPGFKHDGHTYTTMVGN-----LGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIHSY 394
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+A +A NV +M+E GC PD T+ LI H A +D A+ + +M D
Sbjct: 395 GRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSPDT 454
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
V+IN + A++L EM+ + P TF +I AR E A+ L R
Sbjct: 455 FTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYR 513
Query: 539 LMKKQNYPP 547
M+ + P
Sbjct: 514 DMQNAGFQP 522
>gi|359474405|ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g47360-like [Vitis vinifera]
Length = 638
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 164/340 (48%), Gaps = 14/340 (4%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK-ALGFFRWVGEHSGYKHNTITYNGIL 273
+ D I K L ++ +L + V VL + + L FF W G S Y+H++ Y+
Sbjct: 38 YGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSSYLYSKAC 97
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+ +++ R +V+E + EG + + T+ + ++ ++ ++A+ + + M + +
Sbjct: 98 ELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIR 157
Query: 334 PSVQDCSLLLRSISSINNPDL--GLV--FRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
+ ++R + DL GL+ + + Y ++ Y + + +GR
Sbjct: 158 ADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNM------ITYVTMIKGFCNVGRL 211
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME-ENG-CIPDIKTWT 447
++A K+ K MK G P+ + Y+ ++ G+C+ G E A +L EME E+G C P++ T+T
Sbjct: 212 EDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYT 271
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+IQ C ++ AL +M + + +L+ GF ++ RV A+KL+ +++
Sbjct: 272 SMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAG 331
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + + +LI L+G + L+EA L R M P
Sbjct: 332 GNV-SYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKP 370
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 131/305 (42%), Gaps = 38/305 (12%)
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
N VL +L+E ++ +AL + + E + + +T+ YN ++R+ + +++EM
Sbjct: 129 NVVLHLLREAKLAD-EALWILKKMAEFN-IRADTVAYNSVIRLFCEKGDMDLAAGLMKEM 186
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
++ TY+ + + F +EDA KLF+ M P+V +++L +
Sbjct: 187 GLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCR---- 242
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ + RAL LG E EK ++ P+ +TY+
Sbjct: 243 -----------------------FGSLERALELLG---EMEK-----ESGDCSPNVVTYT 271
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I C+ G+ +A +LD M GC P+ T +IL++G CA V+ A K++
Sbjct: 272 SMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAG 331
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ + LI + K + A KL M+ ++P TLI+ L R+ +
Sbjct: 332 GNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLANA-VKPDGLACGTLIKALCLEGRVLD 390
Query: 533 AMNLL 537
+L
Sbjct: 391 GFHLF 395
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 121/540 (22%), Positives = 217/540 (40%), Gaps = 27/540 (5%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S+ + N + +L ES V K D + FF+ + + F+ +++ Y +M+
Sbjct: 24 SNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIER 83
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIA 198
L + + L++MK D E+ ++ I+ K+ A AL F+ + E
Sbjct: 84 LGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQ--ALKMFYR--IGEFG 139
Query: 199 MDNVAKT---LVDVVLGSDWDDKIGKKLEDMKIE--LSDNFVLTVLKELRIYPVKALGFF 253
+ L+D +L + I +MK + + + F +L + +
Sbjct: 140 CKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAH 199
Query: 254 RWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG--YEMDIDTYIKISR 309
+ E S G + +TY ++ L + + D + K Y ID K R
Sbjct: 200 KLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPSVPVYNALIDGMCKEGR 259
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+E A+KL MMD P+V S ++ S+ N +L F + + G
Sbjct: 260 -------IEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELA--FALFAQMFLRGC 310
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ + + + G+ EA + K M G EP+ + Y+ +I GLC G E+A
Sbjct: 311 DANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQ 370
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
V D+M+ +GC+P++ T++ILI G + ++ A + +M+ + +++
Sbjct: 371 VCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLC 430
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ A LVE + P TF T I+ L G R+E AM LL M+ P
Sbjct: 431 KNSMFDQANS-LVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNI 489
Query: 550 EPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + + + E+A + + + P+ Y V F G EA L K
Sbjct: 490 TTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGK 549
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 98/466 (21%), Positives = 188/466 (40%), Gaps = 49/466 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K P+ Y+++L+ L D + M C + TY +++ L KA K
Sbjct: 172 KDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKID 231
Query: 182 DLAAL-----------NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK-------IGKKL 223
D L N DGM KE ++ VA L+ ++ + D I
Sbjct: 232 DARELAGRFKPSVPVYNALIDGMCKEGRIE-VAIKLLGEMMDNGVDPNVVSYSCIINSLC 290
Query: 224 EDMKIELSDNFVLTVLKELR--------IYPVKALGFFR---------W-VGEHSGYKHN 265
+EL+ F L LR P+ F R W + G + N
Sbjct: 291 VSGNVELA--FALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+ YN ++ L + S+ + V ++M++ G ++ TY + F K + A + +
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M+ +P+V + ++ + N + K G + + ++ + L
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCK--NSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCG 466
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR + A K+++ M+ G P+ TY++++ L + ++E+A + E+E P++ T
Sbjct: 467 NGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVT 526
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ++ G A + AL F K + + D+ + +I+ + Q +V K+ +++
Sbjct: 527 YNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKV----KIAAQLV 582
Query: 506 EKV-RLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
E+V ++ W T+ +LI +EEAM L Q P
Sbjct: 583 ERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICP 628
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 39/328 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+ ++ L + SL++ +M+ C TY SIL + K+ DL
Sbjct: 347 PNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY-SIL--IDGFAKSGDLVGA 403
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
++ + M+ NV +VDV+ + D+ +E M +E
Sbjct: 404 SETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLE--------------- 448
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
G NTIT+N ++ L + V ++E M+ G +I TY
Sbjct: 449 ----------------GCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTY 492
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
++ + E+A LF+ + +P++ + +L S +G ++ K
Sbjct: 493 NELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM--MGEALQLFGKA 550
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGR 423
G + Y+ + A K G+ A ++++ + + + PD ITY+ +I+G C
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQ 451
E+A LD+ G P+ TW L++
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVR 638
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 7/250 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TY ++ VL ++ ++VE+M EG + T+ + +E A
Sbjct: 414 GCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWA 473
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KL E M P++ + LL ++ +N + F + + E+ + Y+ +
Sbjct: 474 MKLLERMQGHGCLPNITTYNELLDALFRMNKYEEA--FGLFQEIEARNLQPNLVTYNTVL 531
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE---MEEN 437
++ G EA ++ G PD+ITY+ +I CK G+ + A +++ M+E
Sbjct: 532 YGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEW 591
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
PDI T+T LI G C ++ A+ K + + + + L+ F G
Sbjct: 592 H--PDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGP 649
Query: 498 YKLLVEMIEK 507
+L +++ K
Sbjct: 650 IHILDDILRK 659
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 54 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM+ K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQANDLIDEMVMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLL 410
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V +L
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +PD TY+ +I CK G +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRL 409
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ NG +P + T+ +L+ G
Sbjct: 410 LKEMQRNGHVPSVVTYNVLMNG 431
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/558 (22%), Positives = 232/558 (41%), Gaps = 58/558 (10%)
Query: 66 PNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQF 125
P+ L ++ +W + L+ L P +T S V L L+ DP A F W+ F
Sbjct: 41 PHHLLSILSKPNWQNN--PSLKSLLPAIT-PSHVSSLFSLNLDPHTALQFSYWISQTPNF 97
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+ + Y+ +L + DH I + I+ ++K A D A
Sbjct: 98 KHNVDSYASLLTLI------------------DHHKIVSDVPKIIVSMIKCCYSAPD--A 137
Query: 186 LNQFHDGMVKEIAMDNVAK-------TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
L F + ++++ D++ K L+ ++ D++ + +M E + T
Sbjct: 138 L--FVSDICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTF 195
Query: 239 LKELRIYPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
+ +Y +GF + + +G + T + R + V + V EEM
Sbjct: 196 NLMINVYC--KMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEM 253
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-N 351
+Y ++ + +++AV LF M D P+V + L++ + N +
Sbjct: 254 PNRNEV----SYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVH 309
Query: 352 PDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+GL+ E L +L + Y+ + + G D A +++ MK G PD
Sbjct: 310 KAMGLL------DEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQR 363
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY I LCK+ R E+A + D + E G ++ +++LI G+C +VD A F KM
Sbjct: 364 TYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKM 423
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ KN +A + LI+G S + A L +M+ K+ L+P TF LI ++L
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMV-KMGLKPTVYTFNILIGRMLKQGD 482
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA-AYLQ 585
++A L+ M P + +I + G V++A + + + + P Y
Sbjct: 483 FDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTS 542
Query: 586 VFESFFNEGRHYEAKDLL 603
+ +++ G Y A D+L
Sbjct: 543 LIKAYGKLGLTYSAFDVL 560
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 120/297 (40%), Gaps = 19/297 (6%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ R + + ++ MK+ G D TY K +E+A +LF+
Sbjct: 328 ITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDS 387
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPD-LGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ + +V S+L+ + D G +F K S S + ++ + L
Sbjct: 388 LTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFE---KMLSKNCSPNAYTFNALIHGLCS 444
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G EA + M G +P T++ +I + K G F+DA L +M +G P +T
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ I+ +C+A +V A +M E+ D LI + A+ +L M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
+ P TF +LI++L R + E E V+ +S FG V
Sbjct: 565 D-ADCEPSHHTFLSLIKQLFDKRYVVEKSG--------------ETGVESVSNFGDV 606
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 177/456 (38%), Gaps = 67/456 (14%)
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQF 189
Y+ ++ L + + RMK+D CY TY +++ L K KA
Sbjct: 261 YNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAM-------- 312
Query: 190 HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKA 249
G++ E+ N+ L+ ++ I + ++ S +L+++KE + P
Sbjct: 313 --GLLDEMLERNLVPDLIT------YNSLIAGQCRAGHLD-SAYRLLSLMKERGLVP--- 360
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ TY + L + V + + + + +EG ++ Y +
Sbjct: 361 ---------------DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLID 405
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ K +++A LFE M+ P+ + L+ + S N L + ++ +G
Sbjct: 406 GYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGN--LKEALSLFDQMVKMGL 463
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ ++ + + K G FD+A K ++ M ++G +P TY+ I C AG+ ++A +
Sbjct: 464 KPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAED 523
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ +M+E G PD T+T LI+ + A M + + + LI
Sbjct: 524 MMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLF 583
Query: 490 SQKRV--------------------NGAYKL--------LVEMIEKVRLRPWQATFKTLI 521
++ V + +K+ L E +EK P ++ LI
Sbjct: 584 DKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLI 643
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+ L A+ LL M+K+ P F IS
Sbjct: 644 SGICKVENLGIALKLLDQMQKEGISPSEMVFNAVIS 679
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 117/302 (38%), Gaps = 44/302 (14%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K TYN + V V++ +++ +MK+EG D TY + + + K +
Sbjct: 496 SGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYS 555
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + + M D +PS L++ + V K G + D
Sbjct: 556 AFDVLKSMFDADCEPSHHTFLSLIKQLFDKR--------YVVEKSGETGVESVSNFGDVP 607
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ K+ FD ++ + M+ G PD+ Y ++I G+CK A +LD+M++ G
Sbjct: 608 GSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGI 667
Query: 440 IPDIKTWTILIQGHC-------AANEVD--------------RALLC------------- 465
P + +I C AAN V+ + L+C
Sbjct: 668 SPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727
Query: 466 -FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F K+ Y+ D +LI+G L Q V +L EM EK T+ L +KL
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM-EKNGCNFSPRTYSILTQKL 786
Query: 525 LG 526
G
Sbjct: 787 HG 788
>gi|449455469|ref|XP_004145475.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Cucumis sativus]
Length = 728
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FF V + G N I Y+ ++ L + SV+ + ++EEM K G++ ++ T+ +
Sbjct: 297 RAVWFFHKVTKM-GLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSL 355
Query: 308 SRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
K E A +LF + + YKP+V + ++ L + + +
Sbjct: 356 IHGLCKKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYC--KEEKLSRAEMLFERMKE 413
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + + Y + K G F +A ++M+ M N GF P+ TY+ ++ GLCK GR E+
Sbjct: 414 QGLVPNTNTYTTLIDGHCKAGNFSKAYELMELMSNEGFFPNTCTYNSIVDGLCKRGRAEE 473
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L+ +N D T+TILI C ++++AL+ KM + + D L LI
Sbjct: 474 AFKLLNTGFQNQIEADGVTYTILISEQCKRADMNQALVFLNKMFKVGFQPDIHLYTTLIA 533
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F Q + + KL E+I K+ L P + T+ ++I +++ A+ + M
Sbjct: 534 AFCRQNMMKDSEKLFDEVI-KLGLAPTKETYTSMICGYCREKKVSLAVKFFQKMSDHGCA 592
Query: 547 P 547
P
Sbjct: 593 P 593
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 21/263 (7%)
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
I + N L L RV N+ + + Y G FDE M G
Sbjct: 197 ILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAG--------NVFDE-------MSARGVY 241
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD+ TY +I G C+ G +A + EM E G + D T T++I C + V+RA+
Sbjct: 242 PDSCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAVWF 301
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F K+ + + +I+G + V A++LL EM+ K +P T +LI L
Sbjct: 302 FHKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMV-KNGWKPNVYTHTSLIHGLC 360
Query: 526 GARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSS 580
E A L L+L++ NY P + IS + E S F + P++
Sbjct: 361 KKGWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLFERMKEQGLVPNT 420
Query: 581 AAYLQVFESFFNEGRHYEAKDLL 603
Y + + G +A +L+
Sbjct: 421 NTYTTLIDGHCKAGNFSKAYELM 443
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 93/226 (41%), Gaps = 6/226 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
++G+ EA M+ M+N G +++I + E A NV DEM G PD
Sbjct: 184 FAEIGKLKEAVDMILDMRNQGLVLTTRVMNRIILVAAEMRLVEYAGNVFDEMSARGVYPD 243
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ +I G+C V A +MME+ + D L ++I F + VN A
Sbjct: 244 SCTYKYIIVGYCRNGNVLEADRWICEMMERGFVVDNATLTLIITAFCEKSLVNRAV-WFF 302
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKF 559
+ K+ L P + ++I L +++A LL M K + P + + K
Sbjct: 303 HKVTKMGLSPNLINYSSMISGLCKRGSVKQAFELLEEMVKNGWKPNVYTHTSLIHGLCKK 362
Query: 560 GTVEDASE-FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G E A FLK + Y P+ Y + + E + A+ L
Sbjct: 363 GWTERAFRLFLKLIRSDNYKPNVHTYTAMISGYCKEEKLSRAEMLF 408
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 38/382 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HN T N +L R + + + +M K G+E I T+ + F + + DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVAN--------KYESLGNS 370
+ +F+ M+ YKP+V + ++ + D L L+ R+ Y SL +
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 371 LSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L S ++ + A K GR EAE+ + M +PD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TYS +I+GLC R ++A + M GC PD+ T++ILI G+C + +V+ + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M ++ + +LI G+ ++N A ++ M+ + P T+ L+ L
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHGLCDN 409
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAY 583
++E+A+ +L M+K + ++ + K G V DA + +L+ + P Y
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 584 LQVFESFFNEGRHYEAKDLLYK 605
+ + +G EA L K
Sbjct: 470 TTMMLGLYKKGLRREADALFRK 491
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 34/277 (12%)
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD---------- 353
Y ++ R +F ++D++ LF M+ PS+ D S LL +IS + D
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 354 -----------------------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
L L K LG+ S + + + R
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A M M G++P+ + Y+ +I GLCK+ + ++A ++L+ ME++G PD+ T+ LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C++ A + M ++ D + LI+ + + RV+ A + EMI + L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SL 287
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P T+ LI L RL+EA + M + P
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 146/363 (40%), Gaps = 18/363 (4%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFN--WVCDKK---QFRPSSTVYSLMLRNLVNKDSLK 146
KL HE + L N + ++ ++ D+ ++P+ +Y+ ++ L +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KT 205
L RM++D + TY S++ L + + SD A +EI D
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD--ATRMVSCMTKREIYPDVFTFNA 261
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK-- 263
L+D + + + E+M D ++T L IY + E G+
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY--SLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 264 ----HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+ +TY+ ++ + + V + EM + G + TY + + + + +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M+ P++ ++LL + + LV + + G Y+ I
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV--ILADMQKNGMDADIVTYNII 437
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R + K G +A + ++ G PD TY+ ++ GL K G +A + +M+E+G
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 440 IPD 442
+P+
Sbjct: 498 LPN 500
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 163/366 (44%), Gaps = 6/366 (1%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
V ++ ++ W + +L ++ + + V+ VL+ L+ A+ +FRW +
Sbjct: 67 VIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVN-NAVNYFRWAERLTD 125
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
H YN +L V+AR ++EEM G+ +T I+I F K R + +A
Sbjct: 126 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAF 185
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M ++P+ + L+ ++S+ + D L + + + LG +++ ++ + R
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT--LFQQMQELGYAVNVHLFTTLIR 243
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ GR D A ++ MK+ EPD + Y+ I KAG+ + A EM+ NG +
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVL 303
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+T +I C A+ ++ A+ F M + A + +I G+ + AY LL
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP--EPFVQYISKF 559
E + P ++ ++ L +++EA+ MKK P + + K
Sbjct: 364 -ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKA 422
Query: 560 GTVEDA 565
G +E A
Sbjct: 423 GKLETA 428
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G +T YN ++ + V + ++EEMK +G+E + TY + K +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSK 373
++A LFE + +V S L+ G V R+ Y E + L+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDG--------FGKVGRIDEAYLIMEELMQKGLTP 722
Query: 374 SVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+VY + + AL K EA ++MK+ P+ ITYS +I GLCK +F A
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P++ T+T +I G A + A F K EK AD+ + + +I G +
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKT---LIEKLLGARRLEEA 533
R + AY+L E+ RL+ KT L++ L A +E+A
Sbjct: 843 NRASDAYRLF----EEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+E+K G+ D +Y + K +A +LF Y Q C L R+ +++
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF-------YTMKEQGCVLDTRAYNTV 625
Query: 350 -----NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + +++ + ++ G+ + Y + L K+ R DEA + + K+ G
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
E + + YS +I G K GR ++A +++E+ + G P++ TW L+ A E+ AL+
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
CF M + + +LI+G ++ N A+ EM +K +P T+ T+I L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQGFKPNVFTYTTMISGL 804
Query: 525 LGARRLEEAMNLLRLMKKQN 544
A + EA L K++
Sbjct: 805 AKAGNIVEADTLFEKFKEKG 824
>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
Length = 532
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 112/438 (25%), Positives = 185/438 (42%), Gaps = 41/438 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFW-VTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
K R + ++ +LR L K + LRRM E C + +Y ++L L KK
Sbjct: 41 KTGLRADAVAFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKC 100
Query: 181 SDLAALNQF--HDGMVKEIAMDNVAKTLVD---VVLGSDWDDKIGK------KLEDMKIE 229
+ A L DG DN +V V+ G + +GK K+ D I
Sbjct: 101 EEAAELIHMMAEDG-------DNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIP 153
Query: 230 ---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
++ N V+ L +++ + + EH N TYN ++ +
Sbjct: 154 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH--IMPNCTTYNSLIHGYLSSGQWTEAV 211
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+++EM ++G ++ TY + K +A ++F M+ KP LL
Sbjct: 212 RILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGY 271
Query: 347 SSINNPDLGLV-------FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
++ N LV V N S ++ S +Y A K GR DEA M
Sbjct: 272 ATEGN----LVEMNNVKDLMVQNGMRSNHHTFSIEIY-----AYCKCGRLDEASLTFIKM 322
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
+ GF PD +TY+ VI GLCK GR +DA + +M ++G P+I T+T LI G +
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
++A F +MM++ D + +I+ + +V A KL +++ + +P ++ T
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLF-DLMPRAGAKPNVVSYNT 441
Query: 520 LIEKLLGARRLEEAMNLL 537
+I A + E M LL
Sbjct: 442 MIHGYFIAGEVGEVMKLL 459
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 23/284 (8%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG K + TY +L A ++ + NV + M + G + T+ + K ++
Sbjct: 254 QSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLD 313
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--Y 376
+A F M + P + + ++ + I D + + + + + LS ++ +
Sbjct: 314 EASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAM----SRFCQMIDDGLSPNIITF 369
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + G++++AE++ M + G PD ++ +I L K G+ +A + D M
Sbjct: 370 TTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPR 429
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ ++ +I G+ A EV + M+ A + L++G +S
Sbjct: 430 AGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVS------ 483
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ L+P T KTLI+ R+E+ + L R M
Sbjct: 484 -----------MGLKPDVDTCKTLIDSCCEDGRIEDILTLFREM 516
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 2/109 (1%)
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ ILI C A ++ ++++ ADA L+ ++KR + A +
Sbjct: 11 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK--QNYPP 547
++ + ++ P ++ TL++ L ++ EEA L+ +M + N PP
Sbjct: 71 VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPP 119
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M++ G+ DI TY + K ++DA+ F M+D P++ + L+ S
Sbjct: 321 KMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYG 380
Query: 351 NPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+ L + + ++ G +++ + L K G+ EA+K+ M AG +P+
Sbjct: 381 KWEKAEELFYEMMDR----GIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNV 436
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEM-------------------EENGCIPDIKTWTIL 449
++Y+ +I G AG + +LD+M G PD+ T L
Sbjct: 437 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTL 496
Query: 450 IQGHCAANEVDRALLCFAKMMEK 472
I C ++ L F +M+ K
Sbjct: 497 IDSCCEDGRIEDILTLFREMLGK 519
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 154/334 (46%), Gaps = 9/334 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ I+Y+ + L + + + + EM+++G D TY + K +E V L
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M + P+V + L+ + D + + ++ E G + + Y + + L
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAM--DILDEMEHRGITPNTVTYTALIQGLC 207
Query: 385 KLGRFDEAEKMMKAMKNAGFE--PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
G + A ++K MK G E P+ +TY+Q+I GLC+ G FE LDEM +GC P+
Sbjct: 208 DCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPN 267
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LI G C A + +M+ + D + + LI+G ++ A ++ +
Sbjct: 268 NATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQI 327
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
M+EK + P T+ +LI+ L A L+EA+ L++ M+ + P + I+ F
Sbjct: 328 LMVEK-GVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQA 386
Query: 563 EDASEFLKAL----SVKEYPSSAAYLQVFESFFN 592
+ L+ + S P+ Y +F+S ++
Sbjct: 387 DRTDHALQLVNEMKSNGLMPAGDIYKILFKSLYS 420
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 104/235 (44%), Gaps = 4/235 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFR 315
EH G NT+TY +++ L V V++EMK G E ++ TY ++ +
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ E ++ + M+ P+ + L+ + + V N+ ++G L +
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVL--LNEMVAIGCELDVVI 305
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + L K+G D A +M M G PD TY+ +I GLC AG ++A ++ EM
Sbjct: 306 YNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMR 365
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
G +P+ T+T LI G A+ D AL +M D+ +L S
Sbjct: 366 AKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLYS 420
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 134/317 (42%), Gaps = 47/317 (14%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FR + E G ++ TYN ++ L + + ++++EM+ G+ + TY +
Sbjct: 109 EAMEIFREM-EEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTL 167
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR---VANKY 364
F ++ A+ + + M P+ + L++ + D G V R V +
Sbjct: 168 IHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLC-----DCGEVERAILVLKEM 222
Query: 365 ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ GN +V Y + L + G F+ + + M +G P+N TY+ +I GLC+ G
Sbjct: 223 KLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKG 282
Query: 423 RFEDACNVLDEMEENGC-----------------------------------IPDIKTWT 447
F +A +L+EM GC PD+ T+T
Sbjct: 283 SFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYT 342
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LIQG C A +D AL +M K ++ LINGF R + A +L+ EM +
Sbjct: 343 SLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEM-KS 401
Query: 508 VRLRPWQATFKTLIEKL 524
L P +K L + L
Sbjct: 402 NGLMPAGDIYKILFKSL 418
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 42/228 (18%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K G+ EA ++ + M+ G PD+ TY+ +I GLCK + E +++DEM+ G P
Sbjct: 100 GLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGFSP 159
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T+T LI G C A VD A+ D+LD
Sbjct: 160 TVVTYTTLIHGFCTAGRVDAAM---------------DILD------------------- 185
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQYI 556
EM E + P T+ LI+ L +E A+ +L+ MK + P + +
Sbjct: 186 -EM-EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGL 243
Query: 557 SKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G E EFL + + +P++A Y + +G EA LL
Sbjct: 244 CQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLL 291
>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 580
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 142/303 (46%), Gaps = 25/303 (8%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + T N +L L +R+ + + + GY +I TY + + + +
Sbjct: 98 SGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISE 157
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS----- 374
A +LF M P V L++ + N ++ L ++ + N +S+
Sbjct: 158 ATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKL-----HQEMLNDISRYEINCK 212
Query: 375 ----VYDGIHRALTKLGRFDEAEKMMKAMK----------NAGFEPDNITYSQVIFGLCK 420
Y+ I L K+GR DEA+++ + MK + G +PD +T++ +I LCK
Sbjct: 213 PNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCK 272
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G+ +A +L M E+G +PD+ T+ LI+G C +++ A F M K + D
Sbjct: 273 EGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVIS 332
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+VLING+ +V A KL EM+ V RP T+ +L++ + A ++++A L +M
Sbjct: 333 YNVLINGYSKTLKVEEAMKLYNEML-LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM 391
Query: 541 KKQ 543
K
Sbjct: 392 KAH 394
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/455 (21%), Positives = 193/455 (42%), Gaps = 46/455 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ + P+ Y+ +++ L + + + RM++ C + TY +++ K
Sbjct: 132 RRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLI---KGLCGTG 188
Query: 182 DLAALNQFHDGMVKEIAMDNVA--------KTLVDVVLGSDWDDKIGKKLEDMKI----- 228
++ + H M+ +I+ + +VD + +D+ + E+MK
Sbjct: 189 NINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIP 248
Query: 229 -ELSDN-----------FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
E+ D + T+ KE ++ K L V SG + +TYN ++
Sbjct: 249 NEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL---LGVMIESGIVPDLVTYNSLIEGF 305
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ + M +G E D+ +Y + + K +E+A+KL+ M+ +P+V
Sbjct: 306 CMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNV 365
Query: 337 QDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEK 394
LL+ I D +F V + NS + ++ DG L K EA K
Sbjct: 366 ITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG----LCKNDCLFEAMK 421
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ +K++ F+ + + +I GLCKAG+ E A + +++ G P++ T+TI+I G C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+VD+A + KM D + L+ GF ++ +LL M +K + P
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK-DVSPDA 540
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
T +++ L + +E ++LL P FP
Sbjct: 541 ITCSIVVDMLSKDEKYQECLHLL--------PRFP 567
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 17/260 (6%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ F MM PS+ + LL ++ I + VF + N+ G S + + +
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKH--YSQVFSLYNQMRLSGLSSDRCTLNIL 110
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + R E + G+ P+ +TY+ +I GLC R +A + M++ GC
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMM------EKNYDADADLLDVLINGFLSQKR 493
PD+ T+ LI+G C ++ AL +M+ E N + +++++G R
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 494 VNGAYKLLVEMIEKVR---------LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ A +L EM + L+P TF LI+ L ++ EA LL +M +
Sbjct: 231 EDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 290
Query: 545 YPPFPEPFVQYISKFGTVED 564
P + I F V D
Sbjct: 291 IVPDLVTYNSLIEGFCMVGD 310
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 206 LVDVVLGSDWDDKIGKKLEDM---KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+ V +GS D+ L+D I+LS + V +L+ + ALG FRW SG+
Sbjct: 75 IAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGF 134
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
KH Y+ ++ L + + + ++EEMK E + +DT K R+F E+AV+
Sbjct: 135 KHTPDLYDILIDTLGKTKQLVKMRGMLEEMK-EARLVTLDTVAKAMRRFAGAGQWENAVR 193
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS--KSVYDGIH 380
+F+ + + + + ++LL ++ V + Y L + ++ + ++
Sbjct: 194 IFDDLETYGLEKNTESMNVLLDTLCKEKK-----VEKARQMYLELKSHIAPNANTFNMFI 248
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+ + DEA ++ MK G P I+YS +I C F +LDEM+ GC
Sbjct: 249 HGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCP 308
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ T+T ++ + E + AL +M Y+ D + LI+ +V A +
Sbjct: 309 ANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHV 368
Query: 501 L-VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
VEM K L P +T+ ++I R E+AM LL M+K +
Sbjct: 369 FEVEMPSKSVL-PNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEH 413
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 97/428 (22%), Positives = 193/428 (45%), Gaps = 38/428 (8%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
S +L+H+ V +L++ +D + A F W F+ + +Y +++ L L
Sbjct: 99 SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQL---- 154
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM-----VKEIAMDNVAK 204
V +R M E+ +E L L + KA + A Q+ + + ++ ++ +
Sbjct: 155 VKMRGMLEEM----KEARLVTLDTVAKAMRR--FAGAGQWENAVRIFDDLETYGLEKNTE 208
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIEL-------SDNFVLTVLKELRIYPVKALGFFRW-V 256
++ +V+L + +K +K M +EL ++ F + + ++ + W +
Sbjct: 209 SM-NVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEA---HWTL 264
Query: 257 GEHSGYKHN--TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
E GY H I+Y+ I+ + + +++EM +G ++ TY I K
Sbjct: 265 EEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKS 324
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES-LGNSLS 372
E+A+++ E M Y+P + L+ ++ + VF V +S L N+
Sbjct: 325 EEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNT-- 382
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFE-DACNV 430
S Y+ + + R ++A K+++ M K+ +PD TY ++ + G+ + D N+
Sbjct: 383 -STYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNL 441
Query: 431 LDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
LDEM ++ DI T+++LI G C AN+ D A F KM+ ++ +L++ F
Sbjct: 442 LDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEF- 500
Query: 490 SQKRVNGA 497
QK ++G
Sbjct: 501 KQKNMDGV 508
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 9/229 (3%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R G+++ A ++ ++ G E + + + ++ LCK + E A + E++ +
Sbjct: 180 RRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSH-IA 238
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+ + I G C N++D A +M + +I + + N Y+L
Sbjct: 239 PNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYEL 298
Query: 501 LVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
L EM + P T+ T++ L + EEA+ + MK Y P F + +
Sbjct: 299 LDEM--DAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTL 356
Query: 557 SKFGTVEDASEFLKA--LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G V +A + S P+++ Y + + R +A LL
Sbjct: 357 GRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLL 405
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 127/513 (24%), Positives = 215/513 (41%), Gaps = 57/513 (11%)
Query: 40 SFTASNQSHT-SQFHINTCQKIFFSTSPNSSLELILACDWSDELE---NKLEELSPKLTH 95
+FT++ + HT FH + S P S+ L A + L N LSP T
Sbjct: 2 AFTSTLKYHTWFPFHHH-----LASHKPTSNSTLSFATTNHEPLTTTTNSATRLSPNFTP 56
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL-------VNKDSLKQF 148
+++ LR+ + D F W + F+PSS+++ +L L KD LK+
Sbjct: 57 TQLLHSLRR-EEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM 115
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
++L + D + E+Y S G+ + + QF D M E+ VA T
Sbjct: 116 KISLSVIDNDSLLVFIESYAS-FGLYNE---------ILQFVDAM--EVEFGVVANTHF- 162
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
NF+L VL + + + V G + + T
Sbjct: 163 -----------------------YNFLLNVLVDGNKLKLVEIAHSNMVSR--GIRPDVST 197
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N +++ L R +R ++EEM+ G D T+ I + F + ++ A+++ E M+
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMV 257
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ + ++L+ + L F + G K ++ + L+K G
Sbjct: 258 EAGCVVTNVTVNVLVNGFCKEGRIEEALRF-IEEMSLREGFFPDKYTFNMLVNGLSKTGH 316
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
A ++M M GF+PD TY+ +I GLCK G ++A VL++M E C P+ T+
Sbjct: 317 VKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNT 376
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I C N+V+ A + K D + LI G + A +L EM K
Sbjct: 377 IISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK- 435
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
P + T+ LI+ L +L+EA+NLL+ M+
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 166/393 (42%), Gaps = 42/393 (10%)
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
KE RI +AL F + G+ + T+N ++ L++ V+ V++ M +EG++
Sbjct: 277 KEGRIE--EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
DI TY + K +++AVK+ M++ P+ + ++ ++ N + +
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEAT--K 392
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+A G Y+ + + L A ++ K MK G PD TY+ +I LC
Sbjct: 393 LALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLC 452
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
G+ ++A N+L EME +GC ++ T+ LI G C + A F +M + ++
Sbjct: 453 FRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSV 512
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMI-EKVR----------------------------- 509
+ LI+G +RV A +L+ +MI E +R
Sbjct: 513 TYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTM 572
Query: 510 ----LRPWQATFKTLIEKLLGARRLEEAMNLLRL--MKKQNYPPFP-EPFVQYISKFGTV 562
P T+ TLI L A R+E A LLR MK N P P +Q + +
Sbjct: 573 ASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRS 632
Query: 563 EDASEFLKALSVK-EYPSSAAYLQVFESFFNEG 594
++A + + K E P + Y VF G
Sbjct: 633 KEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 39/288 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ L +++ N+++EM+ G ++ TY + F K + + +A
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++F+ M E G S + Y+ +
Sbjct: 496 EEIFDQM-------------------------------------ELQGVSRNSVTYNTLI 518
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R +EA ++M M G PD TY+ ++ CKAG + A +++ M +GC
Sbjct: 519 DGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCE 578
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C A V+ A + K + + +I +KR A +L
Sbjct: 579 PDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRL 638
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
EMIEK P T+K + L G + EA++ + M ++ Y P
Sbjct: 639 FREMIEKAE-APDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP 685
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 4/208 (1%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + G PD T++ +I LC+A + A +++EME+ G +PD KT+T ++QG
Sbjct: 186 MVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGN 245
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D A+ +M+E ++VL+NGF + R+ A + + EM + P + TF
Sbjct: 246 LDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFN 305
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVK 575
L+ L ++ A+ ++ +M ++ + P + IS K G V++A + L + +
Sbjct: 306 MLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIER 365
Query: 576 EY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ P++ Y + + E + EA L
Sbjct: 366 DCSPNTVTYNTIISTLCKENQVEEATKL 393
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 109/245 (44%), Gaps = 5/245 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N++TYN ++ L + E V + ++++M EG D TY + F K +
Sbjct: 503 ELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDI 562
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A + + M +P + L+ + + ++ + G +L+ Y+
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAAT--KLLRTIQMKGINLTPHAYN 620
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEE 436
+ +AL + R EA ++ + M PD +TY V GLC+ G +A + + EM E
Sbjct: 621 PVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLE 680
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G +P+ ++ +L +G + V + +MEK +D ++ +I GFL +
Sbjct: 681 RGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV--TMIRGFLKISKYQD 738
Query: 497 AYKLL 501
A L
Sbjct: 739 ALATL 743
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 173/424 (40%), Gaps = 17/424 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ F P Y+ ++ L + + L +M E C TY +I+ L K +
Sbjct: 329 REGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVE 388
Query: 182 DLA--ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS--DNFVLT 237
+ AL G++ ++ N +L+ + S + ++MK + D F
Sbjct: 389 EATKLALVLTGKGILPDVCTYN---SLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYN 445
Query: 238 VLKELRIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+L + + K AL + + E SG N ITYN ++ +++ + + + ++M+
Sbjct: 446 MLIDSLCFRGKLQEALNLLKEM-EVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMEL 504
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G + TY + K +E+A +L + M+ +P + LL D+
Sbjct: 505 QGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAG--DI 562
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+ S G Y + L K GR + A K+++ ++ G Y+ V
Sbjct: 563 KKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPV 622
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC-AANEVDRALLCFAKMMEKN 473
I L + R ++A + EM E PD T+ I+ +G C + A+ +M+E+
Sbjct: 623 IQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERG 682
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
Y + +L G S V KL+ ++EK + + T+I L + ++A
Sbjct: 683 YVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKFSDNEV---TMIRGFLKISKYQDA 739
Query: 534 MNLL 537
+ L
Sbjct: 740 LATL 743
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 79/168 (47%), Gaps = 12/168 (7%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A K F+P + + +V+ L KAG F+ ++L EM+ + + D + + I+ + A+
Sbjct: 79 ASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESY-ASF 137
Query: 458 EVDRALLCFAKMMEKNYDADAD------LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+ +L F ME + A+ LL+VL++G K V A+ +V +R
Sbjct: 138 GLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGN-KLKLVEIAHSNMVSR----GIR 192
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
P +TF LI+ L A ++ A+ L+ M+ P + F + F
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGF 240
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/402 (22%), Positives = 172/402 (42%), Gaps = 15/402 (3%)
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK---ELRIYPVKALGFFRWVGEHSGYKHN 265
+ L S+W+ K + L + L+ V VL+ + RI AL FF W Y+H+
Sbjct: 141 ISLRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQDDERI----ALDFFYWADRQWRYRHD 196
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
I Y +L +L++ + ++ M + G E + + + + + M+ +A+++
Sbjct: 197 AIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILT 256
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M +P + C+ + + N + L R + + G Y+ + +
Sbjct: 257 LMQKAGVEPDLSICNTAIYVLVKGNKLEKAL--RFLERMKVAGIEPDIVSYNCLIKGYCD 314
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG-CIPDIK 444
+ R D+A +++ M G PD ++Y V+ LCK + E+ +++ M +N IPD
Sbjct: 315 VHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQV 374
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI D AL+ + EK + D +++ F K ++ A L+++M
Sbjct: 375 TYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDM 434
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
K P T+ +I+ +++EA +L+ M K P + ++
Sbjct: 435 YSK-GCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGK 493
Query: 565 ASEFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ E + ++V E P++ Y V EG+ EA DL
Sbjct: 494 SLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDL 535
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 137/603 (22%), Positives = 248/603 (41%), Gaps = 105/603 (17%)
Query: 74 LACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYS 133
L +W+ + E L L L V VLR D D A FF W + ++R + VY
Sbjct: 143 LRSNWNPKFEENLRHLLRSLNPRLVCAVLRSQD-DERIALDFFYWADRQWRYRHDAIVYY 201
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM 193
ML ++++K L Q + R+ ++ G+ +++ +A ++ GM
Sbjct: 202 TML-DILSKTRLCQGARRILRL------------MTRRGI-ERSPEAFSYVMVSYSRAGM 247
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
++ N + L + K G + D+ I + +VL +L KAL F
Sbjct: 248 LR-----NALRILTLM-------QKAGVE-PDLSICNTAIYVLVKGNKLE----KALRFL 290
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+ + +G + + ++YN +++ + D ++ EM +G D +Y + K
Sbjct: 291 ERM-KVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCK 349
Query: 314 FRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVF-RVANK-------- 363
R +E+ +L E M+ + P + L+ ++S + D LVF R A +
Sbjct: 350 DRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKV 409
Query: 364 -YESLGNSLSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAM 399
Y ++ +S K+ Y I ++G+ DEA+KM++ M
Sbjct: 410 GYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
G +P+ +TY+ ++ GLC G+ +A +++ EE+ P+ T++ ++ G ++
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE---------------- 503
A +M+EK + + +++LI + V GA K L E
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 504 ---------------MIEKVRL---RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M+E + L P T+ TL + L RL+EA L+ M +
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649
Query: 546 PPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P P + I +F G V+D + L+ + ++ P Y QV E G EA+ L
Sbjct: 650 DPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ-PFKTVYNQVIEKLCYFGNREEAEKL 708
Query: 603 LYK 605
L K
Sbjct: 709 LGK 711
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 108/247 (43%), Gaps = 6/247 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S + + + ++ G A +++ M+ AG EPD + I+ L K + E A
Sbjct: 227 GIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKA 286
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L+ M+ G PDI ++ LI+G+C + +D AL A+M K D ++
Sbjct: 287 LRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAF 346
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++V +L+ M++ L P Q T+ TLI L ++A+ LR +++ +
Sbjct: 347 LCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHI 406
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKEY-----PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + F ++ + K+L + Y P Y + + F G+ EAK +
Sbjct: 407 DKVGYSAVVDSFCKNKNIDK-AKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKM 465
Query: 603 LYKCPHH 609
L + H
Sbjct: 466 LQQMYKH 472
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 12/256 (4%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---EMDIDTYIKISRQFQ 312
V E + N ITY+ ++ L R + + ++ EM ++G+ +DI+ I+
Sbjct: 503 VSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQ---SLC 559
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
+ + + A K E + +V + + ++ I + D L + + Y L N
Sbjct: 560 RNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAALSM-LEDMY--LSNKHP 616
Query: 373 KSV-YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ Y + AL K R DEA +++ M G +P +TY VI C+ GR +D +L
Sbjct: 617 DAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLL 676
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
++M P + +I+ C + A K++ DA +LI +L
Sbjct: 677 EKMIARQ--PFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTASKLDAKTCHILIESYLID 734
Query: 492 KRVNGAYKLLVEMIEK 507
AYK+ +M +
Sbjct: 735 GNALSAYKVACQMFRR 750
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 50/249 (20%), Positives = 101/249 (40%), Gaps = 8/249 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N + N +++ L R+++V +EE +G +++ + + F + ++ A
Sbjct: 543 GFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIGDLDAA 602
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDG 378
+ + E M P + L ++ + D L+ ++ K G + Y
Sbjct: 603 LSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGK----GIDPTPVTYRA 658
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + GR D+ K+++ M +P Y+QVI LC G E+A +L ++
Sbjct: 659 VIHRFCQWGRVDDMMKLLEKM--IARQPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRTA 716
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
D KT ILI+ + A +M +N D L + + + A
Sbjct: 717 SKLDAKTCHILIESYLIDGNALSAYKVACQMFRRNLIPDLKLCEKVTKKLVLDGMPAEAD 776
Query: 499 KLLVEMIEK 507
L++ +E+
Sbjct: 777 DLMLRFVER 785
>gi|224136626|ref|XP_002322376.1| predicted protein [Populus trichocarpa]
gi|222869372|gb|EEF06503.1| predicted protein [Populus trichocarpa]
Length = 715
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 215/491 (43%), Gaps = 49/491 (9%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK-------- 142
LTHE + V+ L ++ A +FFNW +FR Y + + +
Sbjct: 103 LTHEQAITVVASLASEAGSMVALSFFNWAIGFPKFRYFMRFYIVCATSFIGNENFERAHE 162
Query: 143 --DSLKQFWVTLRRMKED-HCYIEEETYLSILGVLKKAKKASDLA--------ALNQFHD 191
D + + + + + +E + IE E + +L V + + +A A N F +
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTV-RTLNCVTGVAGEMGLVGYAENVFDE 221
Query: 192 GMVKEIAMDNVAKTLVDVV---LG--SDWDDKIGKKLEDM--KIELSDNFVLTVLKEL-- 242
V+ + D+V+ L+ + +G SD D + L+DM + + DN T++
Sbjct: 222 MRVRGVCPDSVSYKLMAIAYCRMGRISDTD----RWLKDMVRRGFVVDNATCTLMISTFC 277
Query: 243 -RIYPVKALGFF-RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
+ + + +F +WV G K N I + ++ L + S++ + ++EEM K+G++ +
Sbjct: 278 EKGFASRVFWYFDKWV--ELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKKGWKPN 335
Query: 301 IDTYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISS---INNPDLGL 356
+ T+ + K E A +LF + + YKP+V + ++ +N ++ L
Sbjct: 336 VYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLL 395
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ + G + Y + +K G F++A ++M M GF + TY+ I
Sbjct: 396 -----SRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFID 450
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LCK GRF +AC +L + G D T+TILI C + AL+ F+KM +
Sbjct: 451 SLCKKGRFLEACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVFFSKMFKAGVQP 510
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D + LI F Q+R+ + KL E + + L P + T+ ++I R + A+
Sbjct: 511 DMHTYNTLIAAFSRQRRMEESEKLFAEAV-GLGLVPTKETYTSMICGYCRDRNVSLALKF 569
Query: 537 LRLMKKQNYPP 547
M P
Sbjct: 570 FNRMSDHGCTP 580
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 9/274 (3%)
Query: 341 LLLRSISSINN--PDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKM 395
L +R+++ + ++GLV N ++ + G Y + A ++GR + ++
Sbjct: 194 LTVRTLNCVTGVAGEMGLVGYAENVFDEMRVRGVCPDSVSYKLMAIAYCRMGRISDTDRW 253
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+K M GF DN T + +I C+ G D+ E G P++ +T LI G C
Sbjct: 254 LKDMVRRGFVVDNATCTLMISTFCEKGFASRVFWYFDKWVELGLKPNLINFTSLINGLCK 313
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ +A +M++K + + LI+G + A++L ++++ +P
Sbjct: 314 RGSIKQAFEMLEEMVKKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVH 373
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
T+ ++I +L A LL MK+Q P + + I SK G E A E + +
Sbjct: 374 TYTSMIHGYCKEDKLNRAEMLLSRMKEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLM 433
Query: 573 SVKEYPSSA-AYLQVFESFFNEGRHYEAKDLLYK 605
+ + ++ Y +S +GR EA LL K
Sbjct: 434 GKEGFSANIFTYNAFIDSLCKKGRFLEACKLLKK 467
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 122/278 (43%), Gaps = 8/278 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK-ISRQFQKFRM 316
+ G NT TY ++ ++ + + +++ M KEG+ +I TY I +K R
Sbjct: 399 KEQGLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGKEGFSANIFTYNAFIDSLCKKGRF 458
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+E A KL + + ++L+ + + LVF +K G Y
Sbjct: 459 LE-ACKLLKKGFRLGLQADTVTYTILISELCRRADTREALVF--FSKMFKAGVQPDMHTY 515
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A ++ R +E+EK+ G P TY+ +I G C+ A + M +
Sbjct: 516 NTLIAAFSRQRRMEESEKLFAEAVGLGLVPTKETYTSMICGYCRDRNVSLALKFFNRMSD 575
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+GC PD T+ LI G C +++D A + M++K + L + K+ +
Sbjct: 576 HGCTPDSLTYGALISGLCKESKLDEACQLYEAMVDKGLSPCE--VTRLTLAYEYCKQDDS 633
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
A +++ +E++ + W T TLI KL R++ A+
Sbjct: 634 ATAMVI--LERLDKKLWIRTVNTLIRKLCSERKVGMAV 669
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 106/274 (38%), Gaps = 44/274 (16%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFE----------------------------- 405
V D + R ++G+F EA M+ M+N G
Sbjct: 163 VMDCMVRVFAEIGKFQEAVNMVIEMENHGLVLTVRTLNCVTGVAGEMGLVGYAENVFDEM 222
Query: 406 ------PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
PD+++Y + C+ GR D L +M G + D T T++I C
Sbjct: 223 RVRGVCPDSVSYKLMAIAYCRMGRISDTDRWLKDMVRRGFVVDNATCTLMISTFCEKGFA 282
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
R F K +E + LING + + A+++L EM++K +P T
Sbjct: 283 SRVFWYFDKWVELGLKPNLINFTSLINGLCKRGSIKQAFEMLEEMVKK-GWKPNVYTHTA 341
Query: 520 LIEKLLGARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS-VKE- 576
LI+ L E+A L L+L++ +Y P + I + + + LS +KE
Sbjct: 342 LIDGLCKKGWTEKAFRLFLKLVRSDDYKPNVHTYTSMIHGYCKEDKLNRAEMLLSRMKEQ 401
Query: 577 --YPSSAAYLQVFESFFNEG---RHYEAKDLLYK 605
P++ Y + + G + YE DL+ K
Sbjct: 402 GLVPNTKTYTCLIDGHSKAGNFEKAYELMDLMGK 435
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 187/434 (43%), Gaps = 53/434 (12%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE +K+++ V VLK VK + FF+W G+ ++H+ TY ++R
Sbjct: 45 WGPDAEKALEVLKLKVDHRLVREVLKIDVEINVK-IQFFKWAGKRRNFEHDLTTYMPLIR 103
Query: 275 VLARHESVRDFWNVVEEMKKEGY----EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
L + W +++EM + D+ +KI K +M+ A+ +F +
Sbjct: 104 CLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKI---LGKAKMVNKALSVFYQIKSR 160
Query: 331 PYKPSVQDC-SLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
KP+ S++L + ++ + L + N+ + ++++ SV + A KLGR
Sbjct: 161 KCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSV---LVSAFVKLGR 217
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
D A ++ MK G P Y+ ++ K+G E A ++ EM++ GC P + T+T
Sbjct: 218 DDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGCAPTVFTYTE 276
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM---- 504
LI+G + V+ A F M++ D L++ LIN F R+ A KL +M
Sbjct: 277 LIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLK 336
Query: 505 ----------------------------IEKVR---LRPWQATFKTLIEKLLGARRLEEA 533
EK++ + P T+ LI+ R+E+A
Sbjct: 337 CAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKA 396
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEYPSSA-AYLQVFES 589
+ LL M ++ +PP P + I+ G E A+E L SSA Y + ++
Sbjct: 397 LLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKN 456
Query: 590 FFNEGRHYEAKDLL 603
GR EA DL
Sbjct: 457 LGKCGRPSEAVDLF 470
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 130/544 (23%), Positives = 224/544 (41%), Gaps = 31/544 (5%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V VL K+D + FF W ++ F T Y ++R
Sbjct: 45 WGPDAEKALEVLKLKVDHRLVREVL-KIDVEINVKIQFFKWAGKRRNFEHDLTTYMPLIR 103
Query: 138 NLVNKDSLKQFWVTLRRM-KEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFHDGMVK 195
L + + W ++ M + C I ++ +L KAK + L+ Q K
Sbjct: 104 CLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNKALSVFYQIKSRKCK 163
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE---LSDNFVLTVLKELRI------YP 246
A + +++ +++ +KI + +M E D +VL + Y
Sbjct: 164 PTA--STYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSVLVSAFVKLGRDDYA 221
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
++ + G H K Y +L + + + +V+EMK +G + TY +
Sbjct: 222 IRLFDEMKANGLHPTAK----IYTTLLAIYFKSGDEKAL-GLVQEMKDKGCAPTVFTYTE 276
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI--NNPDLGLVFRVANKY 364
+ + K +EDA +F M+ KP V +L+ ++ +I L ++ ++
Sbjct: 277 LIKGLGKSGRVEDAYSVFLNMLKDGCKPDV----VLINNLINIFGKAGRLEDALKLFDQM 332
Query: 365 ESLGNSLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
SL + + Y+ + +AL EA + MK G P + TYS +I G CK R
Sbjct: 333 RSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNR 392
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E A +L+EM+E G P + LI A + A F ++ E + A + V
Sbjct: 393 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAV 452
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+I R + A L EM +K+ P + L+ L+ A +EEA + LR M++
Sbjct: 453 MIKNLGKCGRPSEAVDLFNEM-KKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEEN 511
Query: 544 NYPP---FPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
P + +++ G E A+E F+K P + +Y + S G EA
Sbjct: 512 GCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEA 571
Query: 600 KDLL 603
L+
Sbjct: 572 AKLM 575
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/435 (25%), Positives = 179/435 (41%), Gaps = 58/435 (13%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
E+ N+ + +T+ +V KL D + A F+ + P++ +Y+ +L
Sbjct: 191 EMCNEGDCFPDTMTYSVLVSAFVKLGRD-DYAIRLFDEM-KANGLHPTAKIYTTLLAIYF 248
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA--LNQFHDGMVKEIA 198
K + ++ MK+ C TY ++ L K+ + D + LN DG
Sbjct: 249 KSGDEKALGL-VQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKP--- 304
Query: 199 MDNVAKTLVDVVLGSDWDDKIGK--KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
DVVL ++ + GK +LED ++L D ++ L+ P
Sbjct: 305 ---------DVVLINNLINIFGKAGRLED-ALKLFDQ-----MRSLKCAP---------- 339
Query: 257 GEHSGYKHNTITYNGILRVLARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
N +TYN +++ L ++ + + E+MK G TY + F K
Sbjct: 340 --------NVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTN 391
Query: 316 MMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY-----ESLGN 369
+E A+ L E M + + P CSL IN + AN+ E+ G
Sbjct: 392 RVEKALLLLEEMDEKGFPPCPAAYCSL-------INALGKAKRYEAANELFLELKENCGR 444
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S +Y + + L K GR EA + MK G PD Y+ ++ GL +AG E+A +
Sbjct: 445 S-SARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFS 503
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
L MEENGC PD+ + I++ G ++A F KM + DA + ++
Sbjct: 504 ALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLS 563
Query: 490 SQKRVNGAYKLLVEM 504
A KL+ EM
Sbjct: 564 RSGMFEEAAKLMREM 578
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 137/295 (46%), Gaps = 13/295 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ NT+T+ +++ L + + ++ +M + GY ++ TY + A
Sbjct: 157 GHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLA 216
Query: 321 VKLFEFMMDG------PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
VKL E M++G KP++ ++ S+ D G + K G +S
Sbjct: 217 VKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMK----GRGISPD 272
Query: 375 V--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
V Y I + GR++ A+ + M + G P+ +T++ +I LCKAG+ E+A ++L
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M + G PD T+ LI G C +D A F M K + DA +VLING+
Sbjct: 333 LMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG 392
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
R+ A KL EM+ K + P T+ TL+ L ++ +A NL MK + P
Sbjct: 393 RMVEAKKLYREMMCK-EIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTP 446
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 37/220 (16%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN +L L R VRD WN+ EMK + TY + K + +A++LF +
Sbjct: 414 ITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHY 473
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+ + ++PS+Q +++ + L K
Sbjct: 474 LENHDFQPSIQ-------------------------------------IFNCLIDGLCKA 496
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
+ + A ++ + + G EP+ ITY+ +I GLCK+G+ E+A ++ MEE GC P++ T+
Sbjct: 497 RKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
L++G C +E+ + + +M EK++ DA + ++++
Sbjct: 557 NTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVD 596
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 123/303 (40%), Gaps = 47/303 (15%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
KI R F D + L++ M P ++L+ ++N D GL V +
Sbjct: 104 KIKRYF-------DVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLA--VLGEML 154
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G+S + + + + L R EA +++ M G+ P+ +TY ++ GLC G
Sbjct: 155 RRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTM 214
Query: 426 DACNVLDEM-EENGCI-----PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
A + +EM NG P++ + +I C +D+ F +M + D
Sbjct: 215 LAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVV 274
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+I+G R GA L EM+++ + P TF LI+ L A ++EEA +LL+L
Sbjct: 275 AYSSIIHGMCHTGRWEGAKGLFNEMVDE-GVHPNVVTFNVLIDALCKAGKMEEANHLLKL 333
Query: 540 MKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
M ++ E P + Y + + F EGR +A
Sbjct: 334 MIQRG-------------------------------ESPDTFTYNTLIDGFCLEGRIDDA 362
Query: 600 KDL 602
+DL
Sbjct: 363 RDL 365
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 29/298 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T TYN ++ + D ++ M+ +G E D +Y + + K M +A
Sbjct: 338 GESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEA 397
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR---VANKYESLGN------SL 371
KL+ MM P+V + LL + FR V + + G +
Sbjct: 398 KKLYREMMCKEIMPTVITYNTLLTGL-----------FREGKVRDAWNLFGEMKVHDLTP 446
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L K EA ++ ++N F+P ++ +I GLCKA + E A +
Sbjct: 447 ESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELF 506
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+ + G P++ T+T++I G C + +++ A F M EK + + L+ GF
Sbjct: 507 NRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQN 566
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ +LL EM EK P +T +++ L + E ++LL P FP
Sbjct: 567 DEMQKVVELLQEMAEK-DFSPDASTISIVVDLLSKDEKYREYLHLL--------PTFP 615
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 86/208 (41%), Gaps = 13/208 (6%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P +++ ++ + K R+ D ++ M G PD T ILI +C N+VD L
Sbjct: 90 PPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAV 149
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL- 524
+M+ + + + L+ G R++ A LL +M+ ++ RP T+ TL+ L
Sbjct: 150 LGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMV-RMGYRPNVVTYGTLLNGLC 208
Query: 525 ------LGARRLEEAMN---LLRLMKKQNYPPFPEPFVQYISKFGTVEDASE-FLKALSV 574
L + EE +N + K N + + + K G ++ E FL+
Sbjct: 209 MTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCT-IIDSLCKDGLIDKGKELFLEMKGR 267
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P AY + + GR AK L
Sbjct: 268 GISPDVVAYSSIIHGMCHTGRWEGAKGL 295
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 147/315 (46%), Gaps = 7/315 (2%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+GF E G+K N ++YN I+ + ++ +++ M+ +G E D TY +
Sbjct: 196 IGFM----EGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLIS 251
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K +E+A LF+ M++ P+ + L+ N DL F ++ G
Sbjct: 252 GMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYC--NKGDLERAFSYRDEMVKKGI 309
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S S Y+ + AL GR EA+ M+K M+ G PD ITY+ +I G + G + A +
Sbjct: 310 MPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFD 369
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +EM G P T+T LI N + A F K++++ D + + +I+G
Sbjct: 370 LHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHC 429
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ V A+ LL EM ++ + P + TF TL++ ++EEA LL MK + P
Sbjct: 430 ANGNVERAFMLLKEM-DRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDH 488
Query: 550 EPFVQYISKFGTVED 564
+ IS +G D
Sbjct: 489 ISYNTLISGYGRRGD 503
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/308 (24%), Positives = 132/308 (42%), Gaps = 5/308 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMED 319
G N +TYN ++ + ++ +EM K+G + TY + + F + RM E
Sbjct: 273 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE- 331
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + + M P ++L+ S N F + N+ S G + Y +
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR--AFDLHNEMLSKGIEPTHVTYTSL 389
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L++ R EA+ + + + + G PD I ++ +I G C G E A +L EM+
Sbjct: 390 IYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSV 449
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ L+QG C +V+ A + +M + D + LI+G+ + + A+
Sbjct: 450 PPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFX 509
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+ EM+ + P T+ LI+ L + + A LL+ M + P ++ I
Sbjct: 510 VRDEML-SIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 568
Query: 560 GTVEDASE 567
G V+ E
Sbjct: 569 GNVDTLVE 576
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 5/223 (2%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ +A + + M+ GF+P+ ++Y+ +I G G E A +LD M G PD T+
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI G C ++ A F KM+E +A + LI+G+ ++ + A+ EM++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
K + P +T+ L+ L R+ EA ++++ M+K+ P + I+ + +A
Sbjct: 307 K-GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365
Query: 567 EFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ LS P+ Y + R EA DL K
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 175/409 (42%), Gaps = 65/409 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDT 303
++L FF W Y + YN ++ + + VR F W++++ MK E+ I+T
Sbjct: 132 QSLAFFNWATSRDDYDQKSPHPYNEMIDLAGK---VRQFDLAWHLIDLMKSRNVEISIET 188
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + R++ + + +AV F M D P S+++ ++S R A++
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRK---------RRASE 239
Query: 364 YESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+S +SL VY + R + G EAEK+ K MK AG EP+ TYS VI
Sbjct: 240 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDA 299
Query: 418 LC-----------------------------------KAGRFEDACNVLDEMEENGCIPD 442
LC KAGR E V ++M++ GC PD
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPD 359
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI+ HC ++ A+ M++K + +A + + ++ VNGA+++
Sbjct: 360 TITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+M+E + P T+ L+ G++ + + + + M + P + ++ F
Sbjct: 420 KMME-AKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 560 GTVEDASEFLKALSVKE---YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G +A + K + V+E PS + Y V G+ + ++L+ K
Sbjct: 479 GHWNNAYKLFKEM-VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEK 526
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 129/570 (22%), Positives = 225/570 (39%), Gaps = 48/570 (8%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ +LE K+ L L V VL +D A FF W + ++R VY +ML
Sbjct: 33 WNHKLEGKMRHLLRGLKPRLVCAVLLS-QSDERVALDFFFWSDRQWRYRHDPIVYCVML- 90
Query: 138 NLVNKDSLKQ---------FWVTLRRMKEDHCYI--------EEETYLSILGVLKKAKKA 180
++++K L Q ++R +D C + + + +L +++KA
Sbjct: 91 DVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGIE 150
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIG-----------KKLEDMKIE 229
+L N +V ++ + L + L + + ++ED +E
Sbjct: 151 PNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNVVTYNCLIKGYCDLHRVED-AME 209
Query: 230 LSDNFVLTVLKELRIYPVKALGFF------RWVG------EHSGYKHNTITYNGILRVLA 277
L L ++ +GF R V E + + +TYN ++ +L
Sbjct: 210 LISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLC 269
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+H+ + + E +K G+++D Y I + K M+ A ++ M P V
Sbjct: 270 KHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVV 329
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ ++ S ++G ++ + G + Y + L + G EA +MMK
Sbjct: 330 TYTAIINGFSQAG--EVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMK 387
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A + + P+ ITYS V+ G + G+ DAC+V+ EM G P +L+Q C
Sbjct: 388 ASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIG 447
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
VD A + + +A +I+ F Q + A LL +M + P T+
Sbjct: 448 RVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNK-HPDAVTY 506
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS--VK 575
T+I+ L R+EEA L M K+ P P + I ++G + + L L +
Sbjct: 507 TTIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLT 566
Query: 576 EYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
A+ QV E G A LL K
Sbjct: 567 RQECRTAFNQVIEKLCTFGNLEAADKLLGK 596
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 174/395 (44%), Gaps = 8/395 (2%)
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
S W+ K+ K+ + L V VL V AL FF W Y+H+ I Y +
Sbjct: 31 SAWNHKLEGKMRHLLRGLKPRLVCAVLLSQSDERV-ALDFFFWSDRQWRYRHDPIVYCVM 89
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
L VL++ + + V+ M + G + + + + + + +A+++ M
Sbjct: 90 LDVLSKTKLCQGARRVLRLMVRRGIQRTPQDFCCVMVSYSRAGKLRNAMQVLTMMQKAGI 149
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P++ C+ + + N + L R + + LG + Y+ + + L R ++A
Sbjct: 150 EPNLLVCNTAIHVLVMANMLEKAL--RFLERMQLLGIMPNVVTYNCLIKGYCDLHRVEDA 207
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ M G PD ++Y V+ LCK R + +V+++ME+ + D T+ LI
Sbjct: 208 MELISEMPLKGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHM 267
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C D AL + ++ + D +++ + + R++ A +++ EM + + P
Sbjct: 268 LCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCI-P 326
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFL 569
T+ +I A + +A +L+ M K P F++ + + G +A E +
Sbjct: 327 DVVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMM 386
Query: 570 KALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
KA + + P++ Y V F EG+ +A D++
Sbjct: 387 KASEEQWWTPNAITYSVVMHGFRREGKLSDACDVV 421
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 5/230 (2%)
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
++ G+ A +++ M+ AG EP+ + + I L A E A L+ M+ G +P++
Sbjct: 129 SRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALRFLERMQLLGIMPNV 188
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ LI+G+C + V+ A+ ++M K D + + GFL + R ++E
Sbjct: 189 VTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPD-KVSYYTVMGFLCKNRRIREVMDVIE 247
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFG 560
+E +L Q T+ TLI L + +EA+ LR +K+ + + V K G
Sbjct: 248 KMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSAIVDSYCKEG 307
Query: 561 TVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
++ A E + + + P Y + F G +A+ +L + H
Sbjct: 308 RMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKH 357
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 191/469 (40%), Gaps = 60/469 (12%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K P Y ++ L +++ + +M++ ++ TY +++ +L K + A +
Sbjct: 217 KGCSPDKVSYYTVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADE 276
Query: 183 LAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
AL + + +D V +VD D+ + + +M F + +
Sbjct: 277 --ALQFLREAQKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEM-------FTRGCIPD 327
Query: 242 LRIYPVKALGFFRW--VGE-----HSGYKH----NTITYNGILRVLARHESVRDFWNVVE 290
+ Y GF + VG+ YKH NT++Y L+ L + + + +++
Sbjct: 328 VVTYTAIINGFSQAGEVGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMK 387
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+++ + + TY + F++ + DA + M+ + P+ + +LLL+S+ I
Sbjct: 388 ASEEQWWTPNAITYSVVMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIG 447
Query: 351 NPD-----------LGLVFRVAN---------KYESLGNSLS-------------KSVYD 377
D +G N + + + +LS Y
Sbjct: 448 RVDEAKKFMEECLNMGCAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYT 507
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I AL K GR +EA ++ M G +P +TY VI + GR ED N+LD+M
Sbjct: 508 TIIDALGKKGRIEEATELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR 567
Query: 438 GCIPDIKT-WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+ +T + +I+ C ++ A K++ DA+ VL+ +L +
Sbjct: 568 ---QECRTAFNQVIEKLCTFGNLEAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLS 624
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQN 544
AYK+ M + L P + + +KL+ + EEA NL LR +++ N
Sbjct: 625 AYKVACRMFSR-SLIPDLKLCEKVCKKLMQEGKSEEADNLFLRFVERGN 672
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 150/339 (44%), Gaps = 7/339 (2%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
++G++ +RD ++ + + DT K+ K + + +E ++
Sbjct: 75 FSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEIL 134
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ Y S+ ++L+ + D+ + V + G S Y+ + +LG
Sbjct: 135 ECGYPASLYFFNILMHRFC--KDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGD 192
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ AM +G +PD TYS +I GLCK + +DA + DEM G +P+ T+T
Sbjct: 193 LDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTT 252
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI GHC VD A+ + +M+ ++ D + LI G + + A+ L+ EM K
Sbjct: 253 LIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK- 311
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
L+P + T+ TLI+ L+ A + M ++N + IS G DA
Sbjct: 312 GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDA 371
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L+ LSV P + Y + F +G ++ LL
Sbjct: 372 EKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K ++DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 232 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 286
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +E
Sbjct: 287 TLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQE 346
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C + A +M+ DA ++IN F + V
Sbjct: 347 NTRLDDV-VYTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 405
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 406 GSKLLKEM 413
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 78/188 (41%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K + DL F + L VY + L
Sbjct: 323 --LIDGCCK-----------------DGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G+ +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 REGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 2/228 (0%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + TY+ ++ L + + D + +EM +G + T+ + K ++
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDL 265
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++++ M+ P + + L+ + DL + ++ G K Y +
Sbjct: 266 AMEIYKQMLSQSLSPDLITYNTLIYGLC--KKGDLKQAHHLIDEMSMKGLKPDKITYTTL 323
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D A + K M D++ Y+ +I GLC+ G+ DA +L EM G
Sbjct: 324 IDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREMLSVGL 383
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PD +T+T++I C +V + +M + +VL+NG
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 163/366 (44%), Gaps = 6/366 (1%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
V ++ ++ W + +L ++ + + V+ VL+ L+ A+ +FRW +
Sbjct: 67 VIDSVCQILETGPWGSSVENRLAELDLNPNPELVIGVLRRLKDVN-NAVNYFRWAERLTD 125
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
H YN +L V+AR ++EEM G+ +T I+I F K R + +A
Sbjct: 126 RAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAF 185
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M ++P+ + L+ ++S+ + D L + + + LG +++ ++ + R
Sbjct: 186 TFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLT--LFQQMQELGYAVNVHLFTTLIR 243
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ GR D A ++ MK+ EPD + Y+ I KAG+ + A EM+ NG +
Sbjct: 244 VFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVL 303
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+T +I C A+ ++ A+ F M + A + +I G+ + AY LL
Sbjct: 304 DDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLL 363
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP--EPFVQYISKF 559
E + P ++ ++ L +++EA+ MKK P + + K
Sbjct: 364 -ERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLSTYNIMIDMLCKA 422
Query: 560 GTVEDA 565
G +E A
Sbjct: 423 GKLETA 428
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 130/285 (45%), Gaps = 21/285 (7%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G +T YN ++ + V + ++EEMK +G+E + TY + K +
Sbjct: 611 KEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRL 670
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSK 373
++A LFE + +V S L+ G V R+ Y E + L+
Sbjct: 671 DEAYMLFEEAKSKGIELNVVIYSSLIDG--------FGKVGRIDEAYLIMEELMQKGLTP 722
Query: 374 SVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+VY + + AL K EA ++MK+ P+ ITYS +I GLCK +F A
Sbjct: 723 NVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFW 782
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P++ T+T +I G A + A F K EK AD+ + + +I G +
Sbjct: 783 QEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNA 842
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKT---LIEKLLGARRLEEA 533
R + AY+L E+ RL+ KT L++ L A +E+A
Sbjct: 843 NRASDAYRLF----EEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 119/260 (45%), Gaps = 13/260 (5%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+E+K G+ D +Y + K +A +LF Y Q C L R+ +++
Sbjct: 573 QEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELF-------YTMKEQGCVLDTRAYNTV 625
Query: 350 -----NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + +++ + ++ G+ + Y + L K+ R DEA + + K+ G
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGI 685
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
E + + YS +I G K GR ++A +++E+ + G P++ TW L+ A E+ AL+
Sbjct: 686 ELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALV 745
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
CF M + + +LI+G ++ N A+ EM +K +P T+ T+I L
Sbjct: 746 CFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEM-QKQGFKPNVFTYTTMISGL 804
Query: 525 LGARRLEEAMNLLRLMKKQN 544
A + EA L K++
Sbjct: 805 AKAGNIVEADTLFEKFKEKG 824
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 131/283 (46%), Gaps = 3/283 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG +T ++ R + V E M+ +G E ++ TY I + F +
Sbjct: 294 SGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYK 353
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ L + M + +P V +LL+R + +G FR+ E G + + Y+ +
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRG--QCIDGHIGSAFRLLRLMEGNGLAADQYTYNVL 411
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K G+ DEA + ++ G P+++T++ VI GLCKAG+F+ AC L+ M G
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGY 471
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T++ I+ C L +M++K+ ++IN +++ A +
Sbjct: 472 APDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ +M+ + P T+ T + RL+EA N++ MKK
Sbjct: 532 IWGQMVSQ-GCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKK 573
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 45/376 (11%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ + T+N ++ R + + ++ +M G+ D +Y + F + +++
Sbjct: 158 SGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDE 217
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A++LF M +P + + L++ + + GL + K + LG + Y +
Sbjct: 218 ALELFREMT----QPDMYTHAALVKGLCDAGRGEEGLC--MLQKMKELGWRPTTRAYAAL 271
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + +EAEK++ M ++G P +T + V+ C+ GR A V + M GC
Sbjct: 272 VDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGC 331
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ ++QG C A +V +A+ +M E + D ++LI G + A++
Sbjct: 332 EPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFR 391
Query: 500 LLVEM----------------------------------IEKVRLRPWQATFKTLIEKLL 525
LL M +E +RP TF T+I L
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLC 451
Query: 526 GARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
A + + A L M Y P PF++ + K ++ F+ + K+ PS+
Sbjct: 452 KAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTV 511
Query: 582 AYLQVFESFFNEGRHY 597
Y V FNE R+Y
Sbjct: 512 NYTIVINRLFNE-RNY 526
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 107/247 (43%), Gaps = 9/247 (3%)
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A+ Y + + + Y+ + RAL + A++ + M +G+ PD T++ +I G C+
Sbjct: 117 AHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCR 176
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+ E A ++ +M G D ++ LI+G C A +D AL F +M + + A
Sbjct: 177 TQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPDMYTHA-- 234
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+ G R +L +M E + RP + L++ ++ EEA +L M
Sbjct: 235 --ALVKGLCDAGRGEEGLCMLQKMKE-LGWRPTTRAYAALVDLWCREQKAEEAEKILNEM 291
Query: 541 KKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
P ++ + G + A +++ K P+ Y + + F N G+
Sbjct: 292 FDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKV 351
Query: 597 YEAKDLL 603
Y+A LL
Sbjct: 352 YKAMALL 358
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 121/305 (39%), Gaps = 54/305 (17%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E+ G + N++T+N ++ L + +E M GY D TY K +
Sbjct: 432 EYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGS 491
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ + + M+ KPS + ++++ + N + GL R+ +
Sbjct: 492 QEGLFFIDEMLQKDVKPSTVNYTIVINRL--FNERNYGLATRIWGQ-------------- 535
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
M + G PD +TY+ + C GR ++A NV+ EM++
Sbjct: 536 ---------------------MVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKM-----MEKNYD-----------ADADLL 481
I D + LI GH + + DRA+ M M ++ A+ +
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHV 634
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ + ++L E+++K + T+ +++E RRL+E +L+ LMK
Sbjct: 635 PLKATSVWKTIELADVFELF-ELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMK 693
Query: 542 KQNYP 546
++N P
Sbjct: 694 EENLP 698
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 111/278 (39%), Gaps = 15/278 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TY +R + + NVV EMKK +D Y + + A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRA 599
Query: 321 VKLFEFMMDGPYKPS--------------VQDCSLLLRSISSINNPDLGLVFRVANKYES 366
V + + M P+ + L++ S +L VF + +
Sbjct: 600 VTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFELFELMKK 659
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
S Y I ++ R DE ++ MK + Y+ ++ CK + D
Sbjct: 660 NSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSD 719
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L M +G +P++ + L+ G A + DRA F K Y+ D + V+I+
Sbjct: 720 AWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIID 779
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
GF+ + + + ++ M+E+++ +P T+ L E+L
Sbjct: 780 GFIRKGHADMCHD-MISMLEQMKCKPSDETYAMLTEEL 816
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++GI+ +RD K+ + + DT K+
Sbjct: 52 ASAVFAAILETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 111
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ S ++ L V +
Sbjct: 112 LEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFC--KEGEIRLAQSVFDAITKW 169
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG +E ++ KAM+ +G +PD TYS +I GLCK + +D
Sbjct: 170 GLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDX 229
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 230 NELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYG 289
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A M K+N
Sbjct: 290 LCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRL 348
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + L+
Sbjct: 349 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLM 408
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + + M+ G + D+ TY + K M+D
Sbjct: 170 GLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDX 229
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 230 NELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLVTYN 284
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 285 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKE 344
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN F + V
Sbjct: 345 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 404
Query: 498 YKLLVEM 504
KL+ EM
Sbjct: 405 SKLMKEM 411
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 240 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQA 299
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ S DL F + L Y +
Sbjct: 300 QDLIDEMSMKGLKPDKITYTTLIDG--SCKEGDLETAFEYRXRMIKENIRLDDVAYTALI 357
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+ TY+ +I CK G ++ EM+ +G +
Sbjct: 358 SGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYV 417
Query: 441 PDIKTWTILIQG 452
P + T+ +L+ G
Sbjct: 418 PSVVTYNVLMNG 429
>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Cucumis sativus]
Length = 950
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 144/342 (42%), Gaps = 63/342 (18%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + ITYN +L + + D + +++ + K+G+ + + Y + + R E+
Sbjct: 262 SGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEE 321
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---- 375
A ++ M+ KP V ++++R +S RV LG + +
Sbjct: 322 AHMWYQKMLRENIKPDVMLYTIMIRGLSQEG--------RVTEALTLLGEMTERGLRPDT 373
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ + + +G DEAE + + P+N TYS +I G+CK G A ++ E
Sbjct: 374 ICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKE 433
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRA------------------------------- 462
ME+ GC+P + T+ LI G C AN ++ A
Sbjct: 434 MEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIAS 493
Query: 463 ------LLCFAKMMEKNYDADADLLD-----------VLINGFLSQKRVNGAYKLLVEMI 505
LC + M+ K Y L+D +LINGF +NGA+KL EM
Sbjct: 494 LQVMMERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQ 553
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K + P T+ TLI+ L A R E+A+ + M K+ P
Sbjct: 554 LKGHM-PDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVP 594
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 173/408 (42%), Gaps = 41/408 (10%)
Query: 237 TVLKELRIYPVKALGF--FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
T+ L+ P LGF F W + + T+ + I+ L + + +W V++E+K
Sbjct: 63 TITSVLQEQPDTRLGFRLFIWSLKSWHLRCRTVQ-DLIIGKLIKENAFELYWKVLQELKN 121
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR---------- 344
++ + + + + + M E AV+ F M D KP + +L+L
Sbjct: 122 SAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFDCKPDLFAFNLILHFLVRKEAFLL 181
Query: 345 SISSIN-------NPDL---GLVFRVANKYESLGNSL-------------SKSVYDGIHR 381
+++ N NPD+ G++ K ++L ++ +Y +
Sbjct: 182 ALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLS 241
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + + +A+++ M+ +G D ITY+ ++ G CK+G +DA +L + ++G I
Sbjct: 242 GLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHIL 301
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ + LI G A + A + + KM+ +N D L ++I G + RV A LL
Sbjct: 302 GVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLL 361
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
EM E+ LRP + LI+ L+EA +L + K + P + + + K
Sbjct: 362 GEMTER-GLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCK 420
Query: 559 FGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G + A K + + PS + + R EA+ L Y+
Sbjct: 421 NGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKANRLEEARLLFYQ 468
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 142/324 (43%), Gaps = 22/324 (6%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+ +H + +N TY+ ++ + ++ + ++ +EM+K G + T+ + K
Sbjct: 399 ISKHDCFPNNH-TYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457
Query: 316 MMEDAVKLFEFMMDGPYKPS-----------VQDCSLLLRSISSINNPDLGL-VFRVANK 363
+E+A LF + M+ KPS V D + L + + + L +++ +
Sbjct: 458 RLEEARLLF-YQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQ 516
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G Y+ + K G + A K+ K M+ G PD++TY +I GL +AGR
Sbjct: 517 LVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGR 576
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
EDA + ++M + GC+P+ T+ ++ C N + AL + K + + + + V
Sbjct: 577 NEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISLALSVWMKYLRDFRGWEDEKVRV 636
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ F + + A + L+EM K + L P+ L++ A+R EA + ++
Sbjct: 637 VAESF-DNEELQTAIRRLLEMDIKSKNFDLAPYTIFLIGLVQ----AKRDCEAFAIFSVL 691
Query: 541 KKQNYPPFPEPFVQYISKFGTVED 564
K V I + VE+
Sbjct: 692 KDFKMNISSASCVMLIGRLCMVEN 715
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 8/303 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A GFF WVG GY H +Y+ ++ +L + + W ++ +M + G M + T K
Sbjct: 1426 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTK 1485
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R+ +A+ F M + ++LL ++ + V R ++
Sbjct: 1486 VMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERS-----VKRARGVFQE 1540
Query: 367 LGNSLS--KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L ++ ++ ++ + K EA M+ MK GF P +TY+ ++ C F
Sbjct: 1541 LRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF 1600
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ +LDEM + C P++ T+TIL+ A AL F K+ E DA + L
Sbjct: 1601 QTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSL 1660
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I R+ AY ++ EM + P TF TLI + E A+ LL M++Q+
Sbjct: 1661 IYILGRAGRLEDAYSVVEEM-RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1719
Query: 545 YPP 547
P
Sbjct: 1720 CNP 1722
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 188/460 (40%), Gaps = 49/460 (10%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
S ++T V +L + ND A FF WV + + + Y LM+ L W
Sbjct: 1406 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1465
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMDNVAKT 205
+ +M E + T ++ L A + ++ A++ FH G+VK+ NV
Sbjct: 1466 GLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE--AIDAFHKMDRFGVVKDTKAMNVL-- 1521
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR--IYPVKALGFFRWVGEHSGYK 263
L+ + E S V +ELR I P
Sbjct: 1522 -----------------LDTLCKERSVKRARGVFQELRGTIPP----------------- 1547
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ ++N ++ + +++ + +EEMK+ G+ + TY + + + + L
Sbjct: 1548 -DENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYAL 1606
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M P+V ++L+ ++ L +K + G + S Y+ + L
Sbjct: 1607 LDEMRKRRCPPNVVTYTILMHALGKAGRTREAL--DTFDKLKEDGVAPDASFYNSLIYIL 1664
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ GR ++A +++ M+ G P+ T++ +I C + E+A +L +MEE C PDI
Sbjct: 1665 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 1724
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
KT+T L++ C V L M K+ D +L++ +V + L E
Sbjct: 1725 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 1784
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
M+ K P Q TF ++EK L R L+ +++++ Q
Sbjct: 1785 MVSK-GFAPKQETFDLVMEK-LEKRNLQSVYKKIQVLRTQ 1822
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 6/200 (3%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+Y ++ L K +F+ ++++M E G + + T T +++ A+ A+ F KM
Sbjct: 1447 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1506
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
D ++VL++ ++ V A + E+ + + P + +F TL+ AR
Sbjct: 1507 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARM 1564
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS----VKEYPSSAAYLQ 585
L+EA++ + MK+ + P + + + +D L + P+ Y
Sbjct: 1565 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1624
Query: 586 VFESFFNEGRHYEAKDLLYK 605
+ + GR EA D K
Sbjct: 1625 LMHALGKAGRTREALDTFDK 1644
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 152/351 (43%), Gaps = 8/351 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + + ++G++ + D ++ + + DT K+
Sbjct: 48 ASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K + + ++ +++ Y S+ ++L+ ++ L V ++
Sbjct: 108 LEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFC--KEGEMRLAQSVFDEITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM NG +P+ T+T LI GHC +D A+ + +M+ + + D + LI G
Sbjct: 226 NELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKEGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEG 594
+ IS G A + L+ LSV P + Y + F +G
Sbjct: 345 DDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 101/247 (40%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
+LF+ M+ P+ + L+ + DL + Y+ + G S Y+
Sbjct: 226 NELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAM-----EAYKEMLRQGFSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C + A +M+ D ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ + S+ +EM ++G+ D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ S DL F+ + L Y +
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDG--SCKEGDLETAFKYKKRMIKENIRLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + G+ AEKM++ M + G +PDN TY+ +I CK G + +L EM+ +G
Sbjct: 353 ISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGH 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPCVVT 418
>gi|296084709|emb|CBI25851.3| unnamed protein product [Vitis vinifera]
Length = 528
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 164/340 (48%), Gaps = 14/340 (4%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK-ALGFFRWVGEHSGYKHNTITYNGIL 273
+ D I K L ++ +L + V VL + + L FF W G S Y+H++ Y+
Sbjct: 44 YGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSSYLYSKAC 103
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+ +++ R +V+E + EG + + T+ + ++ ++ ++A+ + + M + +
Sbjct: 104 ELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIR 163
Query: 334 PSVQDCSLLLRSISSINNPDL--GLV--FRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
+ ++R + DL GL+ + + Y ++ Y + + +GR
Sbjct: 164 ADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNM------ITYVTMIKGFCNVGRL 217
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME-ENG-CIPDIKTWT 447
++A K+ K MK G P+ + Y+ ++ G+C+ G E A +L EME E+G C P++ T+T
Sbjct: 218 EDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYT 277
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+IQ C ++ AL +M + + +L+ GF ++ RV A+KL+ +++
Sbjct: 278 SMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKLIDKVVAG 337
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + + +LI L+G + L+EA L R M P
Sbjct: 338 GNV-SYGECYSSLIVSLVGNKNLQEAEKLFRRMLANAVKP 376
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 148/340 (43%), Gaps = 6/340 (1%)
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
N VL +L+E ++ +AL + + E + + +T+ YN ++R+ + +++EM
Sbjct: 135 NVVLHLLREAKLAD-EALWILKKMAEFN-IRADTVAYNSVIRLFCEKGDMDLAAGLMKEM 192
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
++ TY+ + + F +EDA KLF+ M P+V +++L + +
Sbjct: 193 GLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSL 252
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ L + ES S + Y + ++ + G+ EA +++ M+ G P+ +T S
Sbjct: 253 ERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVS 312
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ G C GR E+A ++D++ G + + ++ LI + A F +M+
Sbjct: 313 ILMKGFCAEGRVEEAFKLIDKVVAGGNVSYGECYSSLIVSLVGNKNLQEAEKLFRRMLAN 372
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLE 531
D LI + RV + L E L + + L+ L R
Sbjct: 373 AVKPDGLACGTLIKALCLEGRVLDGFHLFDEFENMEGLSYLDSDIYSILLVGLSQKRHSV 432
Query: 532 EAMNLLRLMKKQNY---PPFPEPFVQYISKFGTVEDASEF 568
EA+ L RLM + P+ + V+++ + G E + F
Sbjct: 433 EAVKLARLMVDRGIQLKTPYFDSIVEHLKESGDKEICTHF 472
>gi|297814175|ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297320808|gb|EFH51230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 802
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 203/475 (42%), Gaps = 65/475 (13%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV-GEHSGYKHNTITYNGILRVLARH 279
+ L+ I +S+ VL +L+ I P K L FFRW +GYKH+ Y+ I R + R
Sbjct: 46 RGLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRTGYKHSVSAYSQIFRTVCRT 105
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM--MDGPYKPSVQ 337
+ + +++ MK++G +D + + E A+ + ++M + PS+
Sbjct: 106 GLLGEVPDLLCSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSLY 165
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS------------------------- 372
D L+ + + L + F++ ++ G+ S
Sbjct: 166 DSVLIALAKKNELRLALSIFFKLLEASDNHGDDTSGVTVSYLPGRVAVNELLVGLRRADM 225
Query: 373 ----KSVYD---GIHR-------------ALTKLGRFDEAEKMMKAMK------NAGFEP 406
K+V++ G++R G D A + K MK + F P
Sbjct: 226 RSEFKTVFEKLKGMNRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVSGSSFAP 285
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D TY+ +I LC G+ +DA V DE++ +G PD T+ ILIQG C + +D A+ F
Sbjct: 286 DICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIF 345
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEKLL 525
+M + D + + L++G L ++V A +L +M+ E VR W T+ LI+ L
Sbjct: 346 GEMQYNGFVPDTVVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCW--TYNILIDGLF 403
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAA 582
R E L +KK+ F V + + G +E+A + ++ + + +
Sbjct: 404 RNGRAEAGFTLFCDLKKKGQFVDAITFSIVVLQLCREGKLEEAVKLVEEMETRGFTVDLV 463
Query: 583 YLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS--LLFGSAKSNKVTIPSRKE 635
+ F++ ++ K+ L K H+R+ + + L + + + P RK+
Sbjct: 464 TISSLLIGFHKQGRWDWKEKLMK---HVREGNLVPNVLRWNAGVEASLKRPQRKD 515
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 196/464 (42%), Gaps = 57/464 (12%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCD-KKQFRPSSTVYSLMLRNLVNKDS 144
L+ S ++ V+ +LR+ DP K FF W + ++ S + YS + R +
Sbjct: 48 LDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSLRTGYKHSVSAYSQIFRTVCRTGL 107
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSIL--GVLKKAKKASDLAALNQFHDGMVKEIAMDNV 202
L + L MKED +++ T IL +++ K S L L+ ++E+ D +
Sbjct: 108 LGEVPDLLCSMKEDGVNLDQ-TMAKILLDSLIRSGKFESALGVLD-----YMEELG-DCL 160
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+L D VL + + KK E +++ LS F L + G Y
Sbjct: 161 NPSLYDSVLIA-----LAKKNE-LRLALSIFFKLLEASDNHGDDTS--------GVTVSY 206
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQFQKFRMMEDAV 321
+ N +L L R + +F V E++K ++ D +Y F + ++ A+
Sbjct: 207 LPGRVAVNELLVGLRRADMRSEFKTVFEKLKGMNRFKFDTWSYNICIHGFGCWGDLDAAL 266
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
LF+ M + + SV S PD+ Y+ +
Sbjct: 267 SLFKEMKE---RSSVSGSSFA---------PDI-------------------CTYNSLIH 295
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L G+ +A + +K +G EPDN TY +I G CK+ R +DA + EM+ NG +P
Sbjct: 296 VLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIFGEMQYNGFVP 355
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D + L+ G A +V A F KM+++ A ++LI+G R + L
Sbjct: 356 DTVVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLF 415
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
++ +K + TF ++ +L +LEEA+ L+ M+ + +
Sbjct: 416 CDLKKKGQFVD-AITFSIVVLQLCREGKLEEAVKLVEEMETRGF 458
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 349 INNPDLGLVFRVANKYESLG-NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
++ DL L ++ + +G L+ Y+ + + K G F ++ M D
Sbjct: 603 LSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFKTVRGVLDQMGENFCAAD 662
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TY+ +I GL K GR + A VLD + + G DI + LI AN +D A F
Sbjct: 663 IATYNVIIQGLGKMGRADLAGAVLDRLTKQGGYLDIVMYNTLINAIGKANRLDAATQLFD 722
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
M + D + +I ++ AYK L M++
Sbjct: 723 HMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLD 761
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+++++ + + DL V ++ G L +Y+ + A+ K R D A ++ M
Sbjct: 667 NVIIQGLGKMGRADLAGA--VLDRLTKQGGYLDIVMYNTLINAIGKANRLDAATQLFDHM 724
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
K+ G PD ++Y+ +I KAG+ ++A L M + GC+P+ T TIL
Sbjct: 725 KSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 774
>gi|147828617|emb|CAN73046.1| hypothetical protein VITISV_008668 [Vitis vinifera]
Length = 477
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 208/461 (45%), Gaps = 31/461 (6%)
Query: 99 VYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK 156
V L K + D +KA F+ + FR S +SLM+ LV+ + + L RMK
Sbjct: 18 VAQLIKAERDIQKAIVIFDSATAEYTNGFRHSHQTFSLMISRLVSANHFRLAEELLCRMK 77
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDV--VLGSD 214
E+ C I E+ +LSI + K D A+ F +KE + K+ + V +L +
Sbjct: 78 EEKCNITEDIFLSICRAYGRVHKPLD--AVRVFRK--MKEYECEPSQKSYITVFAILVGE 133
Query: 215 WDDKIG----KKLEDMKIE---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
K+ + + +M I S N ++ L + AL FR + + G ++
Sbjct: 134 NQLKLALRFYRYMREMGIPPSVASLNVLIKALCKNSGTMDAALRIFREM-PNRGCPPHSY 192
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L R + + + +EM+ + + TY + + + ++ A++L E M
Sbjct: 193 TYGTLIXGLCRLGKIGEAKELFKEMETKACSPTVVTYXSLIHGLCQSKDLDSAIRLLEEM 252
Query: 328 MDGPYKPSVQDCSLLL--RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
KP+V S L+ S ++ L L+ + ++ L N ++ Y + L K
Sbjct: 253 ASKGIKPNVFTYSSLMDGHCKSGCSSRALELLDMMVSR-RHLPNMIT---YSTLVHGLCK 308
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G+ EA +++ MK G PD Y ++I G C +F +A N LDEM G P+ T
Sbjct: 309 EGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLT 368
Query: 446 WT-------ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
W+ I++QG C + +RA + M + DA D L+N F ++ ++ A
Sbjct: 369 WSLHVRIHNIVVQGLCTEHP-NRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAA 427
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L+ EM+ + P + T+ ++ R++ E+ L+++
Sbjct: 428 HLVDEMVLDGCI-PDEXTWNAVVCAFWDRRKVRESAELVQV 467
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 146/314 (46%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++H+ T++ ++ L R ++ MK+E + D ++ I R + + D
Sbjct: 44 NGFRHSHQTFSLMISRLVSANHFRLAEELLCRMKEEKCNITEDIFLSICRAYGRVHKPLD 103
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV++F M + +PS Q + + +I + L L R +G S + + +
Sbjct: 104 AVRVFRKMKEYECEPS-QKSYITVFAIL-VGENQLKLALRFYRYMREMGIPPSVASLNVL 161
Query: 380 HRALTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL K G D A ++ + M N G P + TY +I GLC+ G+ +A + EME
Sbjct: 162 IKALCKNSGTMDAALRIFREMPNRGCPPHSYTYGTLIXGLCRLGKIGEAKELFKEMETKA 221
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+ LI G C + ++D A+ +M K + L++G + A
Sbjct: 222 CSPTVVTYXSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHCKSGCSSRAL 281
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+LL M+ + L P T+ TL+ L +L+EA+ +L MK Q P + + IS
Sbjct: 282 ELLDMMVSRRHL-PNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISG 340
Query: 559 FGTV---EDASEFL 569
F + +A+ FL
Sbjct: 341 FCDICKFHEAANFL 354
>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
lyrata]
Length = 988
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 27/346 (7%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+W E G N +TY ++ + + V + E M EG +I TY +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ME A ++FE R S + PD+ + F+ + S
Sbjct: 599 CKAGQMEKACQIFE------------------RMCGSKDVPDVDMYFKQYDDDNS--ERP 638
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ +Y + KL R +EA K++ AM G EP+ I Y +I GLCK G+ ++A V
Sbjct: 639 NVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 698
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM E+G + T++ LI + D A +KM+E + + + +I+G
Sbjct: 699 AEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 758
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ + AYKL+ +M+E+ +P T+ +I+ ++E + LL M + P
Sbjct: 759 GKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPSSAA-YLQVFESFFNE 593
+ + + K G ++ A L+ + +P+ AA Y +V E F E
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKE 863
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 155/327 (47%), Gaps = 11/327 (3%)
Query: 203 AKTLVDVVLGSD--WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
A+ + D V G D + K K L + +LS++ V+ VL+ + P + FF W G
Sbjct: 101 ARAIADAVSGGDDVFGSKSQKFLRQFREKLSESLVIEVLRLIE-RPSAVISFFVWAGRQI 159
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GYKH + YN ++ ++ R + + ++++++ + E+ + + R++ + A
Sbjct: 160 GYKHTSPVYNALVDLIVRDDDEKVPEELLQQIRDDDKEVFGEFLNVLVRKYCRSGSFSIA 219
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-LGLVFRVANKYESLGNSLSKSVYDGI 379
++ + D ++PS + L+++ + D LV R + + + Y
Sbjct: 220 LEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCY--- 276
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+L K+G++ EA + M+ F PD + Y+++I GLC+A FE+A + L+ M C
Sbjct: 277 AYSLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSC 333
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+P++ T++ L+ G ++ R MM + + + L++ + + + AYK
Sbjct: 334 LPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYK 393
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLG 526
LL +M+ K P + LI + G
Sbjct: 394 LLKKMV-KCGHTPGYVVYNILIGSICG 419
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 132/585 (22%), Positives = 245/585 (41%), Gaps = 78/585 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L + KL+ V+ VLR ++ P +FF W + ++ +S VY+ ++ +V D
Sbjct: 123 LRQFREKLSESLVIEVLRLIER-PSAVISFFVWAGRQIGYKHTSPVYNALVDLIVRDDDE 181
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K L+++++D ++E + L VL K + S AL + G +K+
Sbjct: 182 KVPEELLQQIRDD----DKEVFGEFLNVLVRKYCRSGSFSIALEEL--GRLKDFRFRPSR 235
Query: 204 KT---LVDVVLGSDWDD-----------------------------KIGKKLEDMKIELS 231
T L+ L +D D K+GK E + + +
Sbjct: 236 STYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTLMET 295
Query: 232 DNFV---------LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+NFV ++ L E ++ +A+ F + S N +TY+ +L + +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQL 353
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+ M EG + + + A KL + M+ + P ++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNIL 413
Query: 343 LRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ SI S++ L L + ++ + G L+K R L G++++A +++
Sbjct: 414 IGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GF PD TYS+V+ LC A + E A + +EM+ G + D+ T+TI++ C A
Sbjct: 474 MIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A F +M E + LI+ +L K+V+ A +L M+ + L P T+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYS 592
Query: 519 TLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY-------------------ISK 558
LI+ A ++E+A + R+ ++ P F QY K
Sbjct: 593 ALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCK 652
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
VE+A + L A+S++ P+ Y + + G+ EA+++
Sbjct: 653 LHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TY ++ R + ++E M +G + TY + K +
Sbjct: 772 EEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 831
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M + ++ + LGL+ + + SL + + D
Sbjct: 832 DVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVD 891
Query: 378 GIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
L K R + A ++++ A +A + TY+ +I LC A + + A + EM
Sbjct: 892 N----LIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMS 947
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ G IP+++T+ LI+G +++ ALL
Sbjct: 948 KKGVIPEMQTFCSLIKGLFRNSKISEALL 976
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + +++ M+++G + ++ TY + F + +E ++L
Sbjct: 744 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELL 803
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M P+ +L+ D+ N E + + + G + +
Sbjct: 804 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVA-----HNLLEEMKQTHWPTHAAGYRKVIE 858
Query: 385 KLGR-FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGCIPD 442
+ F E+ ++ + P Y ++ L KA R E A +L+E+ + + D
Sbjct: 859 GFNKEFIESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVD 918
Query: 443 IK-TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
T+ LI+ C AN+VD+A F++M +K + LI G +++ A LL
Sbjct: 919 YSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKISEALLLL 978
>gi|297733848|emb|CBI15095.3| unnamed protein product [Vitis vinifera]
Length = 815
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 152/343 (44%), Gaps = 19/343 (5%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
T+V++VL +D + + LE +E + N V VLK L + KAL FF+ + H Y H
Sbjct: 41 TIVNLVLKTD-SQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAH 99
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +++ + + R + W +V+ M+ + T+ I+ ++ + A+K+F
Sbjct: 100 VSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIF 159
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + C L S ++I + V + + E N L K V+ G RA
Sbjct: 160 FSMHE-------HGCVQDLNSFNTILD-----VLCKSKRVEMADNKLFK-VFRGFFRA-- 204
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G+ EA + MK E D +TY+ V+ G AG A V +EM G +P +
Sbjct: 205 --GQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVA 262
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ IQ C + V+ A+ F +M+ K Y ++ +V+I G R+ A + + M
Sbjct: 263 TYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARM 322
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ P + +I A +E+ +N+ M + P
Sbjct: 323 KDD-ECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLP 364
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 195/502 (38%), Gaps = 110/502 (21%)
Query: 11 LRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSL 70
L LAN L S+R T PL +++ +++++ T+ +N
Sbjct: 2 LILANRLSSLRP--TEPLLKPISYNYNLTTTTSPPSPPQDATIVN--------------- 44
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
L+L D S L LE+ + T V VL+ L N KA FF + + S+
Sbjct: 45 -LVLKTD-SQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSS 102
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL--NQ 188
+ + K W + RM+ +T+ I A K + +
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
G V+++ N T++DV+ S ++E++DN + V +
Sbjct: 163 HEHGCVQDL---NSFNTILDVLCKSK------------RVEMADNKLFKVFR-------- 199
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
GFFR G+ +++ W +MKK E+D+ TY +
Sbjct: 200 --GFFR-AGQ-----------------------LKEAWEFFLQMKKRKCEIDVVTYTTVV 233
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F + A ++F M+ PSV
Sbjct: 234 HGFGVAGEVRKAQRVFNEMIGEGVLPSV-------------------------------- 261
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + L K + A + + M G+ P++ TY+ VI GLC GR E A
Sbjct: 262 -----ATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAM 316
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ M+++ C P+++ + ++I+ C A E+++ L F KM + + + D ++LI+
Sbjct: 317 EFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAM 376
Query: 489 LSQKRVN---GAYKLLVEMIEK 507
+K+ + A KLL+EM+E+
Sbjct: 377 FVRKKSDYLLTAGKLLIEMVER 398
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/227 (19%), Positives = 92/227 (40%), Gaps = 24/227 (10%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI---- 450
++ M+ P+ T++ + AG+ + A + M E+GC+ D+ ++ ++
Sbjct: 123 LVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLC 182
Query: 451 ----------------QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+G A ++ A F +M ++ + D +++GF V
Sbjct: 183 KSKRVEMADNKLFKVFRGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEV 242
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
A ++ EMI + L P AT+ I+ L +E A+++ M ++ Y P +
Sbjct: 243 RKAQRVFNEMIGEGVL-PSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNV 301
Query: 553 -VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
++ + G +E A EF+ + E + V +F + E
Sbjct: 302 VIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIE 348
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 173/393 (44%), Gaps = 24/393 (6%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ + YK T+ ++ A + V + MK+E +I + R +
Sbjct: 66 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 125
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYE-SLG 368
K + E A++LF M+D C +RS +S+ N + GL R YE +G
Sbjct: 126 GKAHLPEKAIELFGRMVDE------FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 179
Query: 369 N--SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
++S +V ++ + +A+ KLG D A ++ + M EPD TY ++ GLCK R
Sbjct: 180 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 239
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A +LDEM+ GC P T+ +LI G C ++ R M K + + +
Sbjct: 240 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 299
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
ING + +++ A LL M+ + P T+ TLI L+ R + ++LL ++++
Sbjct: 300 INGLCLKGKLDKAVSLLDRMVAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 358
Query: 545 YPPFPEPFVQYISKFGTVEDASEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ + IS E + E + K + P+ Y + + EG+ EAK
Sbjct: 359 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 418
Query: 601 DLLYK-----C-PHHIRQDSKISLLFGSAKSNK 627
++L + C P+ S I F + S K
Sbjct: 419 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 451
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 180/459 (39%), Gaps = 76/459 (16%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKAS 181
++ P Y ++ L +D + + + L M+ + C+ T+ + I G+ KK
Sbjct: 217 QKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKG---- 272
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D+ + + D M + + N T ++ G K+ D + L D V +
Sbjct: 273 DMVRVTKLVDNMFLKGCVPNEV-TYNTIINGLCLKGKL-----DKAVSLLDRMVAS---- 322
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ P N +TY ++ L + D +++ +++ G+ +
Sbjct: 323 -KCVP------------------NDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
Y + K E+A+ L++ M++ +P++
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNI------------------------- 398
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
VY + L + G+ DEA++++ M N G P+ TYS +I G K
Sbjct: 399 ------------VVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKT 446
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G + A V EM +N C+P+ +++LI G C ++ A++ + M+ + D
Sbjct: 447 GNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAY 506
Query: 482 DVLINGFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+I+G + V KL EM+ ++ +P T+ L+ L + A++LL M
Sbjct: 507 SSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSM 566
Query: 541 KKQNYPP---FPEPFVQYI-SKFGTVEDASEFLKALSVK 575
+ P F+ + K +D EFL L V+
Sbjct: 567 LDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR 605
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 52 ASAVFAAILETQGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 111
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ D+ + V +
Sbjct: 112 LEHLMKLKYFKLVWXFYKEILECGYPASLYFFNILMHRFC--KEGDIRVALSVFDAITKW 169
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 170 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 229
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 230 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYG 289
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + ++ TLI+ LE A + M ++N
Sbjct: 290 LCKKGDLKQAQDLIDEMRMK-GLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRL 348
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G + LL
Sbjct: 349 DDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLL 408
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 170 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 229
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + V++ + L SLS + Y+
Sbjct: 230 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYK-----QMLSQSLSPDLITYN 284
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M+ G +PD I+Y+ +I G CK G E A M +
Sbjct: 285 TLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQE 344
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 345 NIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTG 404
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 405 SKLLKEM 411
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM+ +G + D KIS +
Sbjct: 281 ITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPD-----KIS---------------YTT 320
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 321 LIDGCCKEG-----------------DLETAFEHRKRMIQENIRLDDVAYTALISGLCQE 363
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR +AEKM++ M + G PD TY+ +I CK G +L EM+ +G +P + T+
Sbjct: 364 GRSIDAEKMLREMLSVGLRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTY 423
Query: 447 TILIQG 452
+L+ G
Sbjct: 424 NVLMNG 429
>gi|225461712|ref|XP_002283237.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g53330-like [Vitis vinifera]
Length = 464
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 132/287 (45%), Gaps = 16/287 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI-------SRQFQKFRMM 317
+ TYN ++ S+ D WNV +EM ++ ++ T+ + SR + FR+
Sbjct: 147 DVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRLK 206
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
ED VK+F KP+ + L++ + +N +L L F + + + L +Y
Sbjct: 207 EDMVKVFN------VKPNAFVYASLMKGLCRVN--ELSLAFELKKEMVANKLRLDSGIYS 258
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K+GR DE +++ M+ G +PD +TY+ +I G C FE A VL+EM
Sbjct: 259 TLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAK 318
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PD+ ++ ++I G C + A F M + D +L +G + N A
Sbjct: 319 GCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEA 378
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+L EM+ K P A+ +E L LE +L + K N
Sbjct: 379 AFILDEMVFK-GYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGN 424
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 6/209 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I C +G DA NV DEM P++ T+ LI G C + +D A
Sbjct: 146 PDVCTYNVLINACCSSGSLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCGDSRLDEAFRL 205
Query: 466 FAKMMEK-NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M++ N +A + L+ G ++ A++L EM+ +LR + TLI L
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAAL 264
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEY-PSS 580
R +E +L M++ P + IS F +D A L+ + K P
Sbjct: 265 FKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVAKGCKPDV 324
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
+Y + EG+ EA DL P
Sbjct: 325 ISYNVIISGLCKEGKWREANDLFEDMPRR 353
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 63/237 (26%)
Query: 218 KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA 277
K+G+K E V VL+E+R +G K +T+TYN ++
Sbjct: 266 KVGRKDE----------VFVVLEEMR---------------ENGCKPDTVTYNAMISGFC 300
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+ + V+EEM +G + D+ +Y I K +A LFE D P +
Sbjct: 301 NEKDFEAAYGVLEEMVAKGCKPDVISYNVIISGLCKEGKWREANDLFE---DMPRR---- 353
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
C+ PD+G +R+ ++DG+ + +F+EA ++
Sbjct: 354 GCT-----------PDVG-SYRI--------------LFDGLCEGM----QFNEAAFILD 383
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M G+ P + + ++ + LC+ G E C VL+ + + I D W++ + C
Sbjct: 384 EMVFKGYAPKSASKTKFVEALCQEGNLELLCKVLNSLVKGNVI-DGDAWSLAVSKVC 439
>gi|343887304|dbj|BAK61850.1| PPR containing protein [Citrus unshiu]
Length = 567
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 145/291 (49%), Gaps = 13/291 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGY-EMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+YN +L VL R S++ ++ KE D+ TY + R + K M+E+A K+F+
Sbjct: 160 SYNSLLGVLVRVNSIKLAEEFFHQIVKENVVPPDVSTYTTMIRGYCKMGMIENAKKVFDV 219
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLG-LVF-RVANKYESLGNSLSKSVYDGIHRALT 384
M KP++ + ++ + + LVF R+ + + L N ++ Y +
Sbjct: 220 MT---VKPNLLAYNTMINGFCKKGDMESARLVFDRMMSGEDCLPNHVT---YTTLIDGYC 273
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G +EA+K M M N G P+ +TY+ +I+GLC GR ++A ++ +M NG ++
Sbjct: 274 KKGELEEAKKCMNEMMNRGCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVS 333
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T +++G C + D+A+ +ME N + D +V+INGF + + A LL EM
Sbjct: 334 THKSMLKGLCVVGKFDQAVGYLRNVMEANMNPDVKSYEVVINGFCKIGKSDEAISLLKEM 393
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
+ L+P +F + L+ L+ A+ LL+ M + + P FV Y
Sbjct: 394 RAR-GLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCLP---NFVSY 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/285 (18%), Positives = 115/285 (40%), Gaps = 53/285 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TYN ++ L + V + ++ +M+ G++ ++ T+ + + + A
Sbjct: 292 GCRPNELTYNAMIYGLCINGRVDEAKMLMAKMRLNGFKDNVSTHKSMLKGLCVVGKFDQA 351
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V +M+ P V+ Y+ +
Sbjct: 352 VGYLRNVMEANMNPDVKS-------------------------------------YEVVI 374
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+G+ DEA ++K M+ G +P +++ V L + G + A +L +M + C+
Sbjct: 375 NGFCKIGKSDEAISLLKEMRARGLKPTVFSFNAVFRILVENGELDRAILLLKQMPQMDCL 434
Query: 441 PDIKTWTILIQGHCAA--------NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
P+ ++ +I G C A + VDR M+ ++ D + L+ G+ +
Sbjct: 435 PNFVSYNTIICGLCMAKGRMQDVEDLVDR-------MIRSGHNLDFTMYSCLLKGYCEEG 487
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
V ++ EM+ K + + +F L+++L ++ EA L
Sbjct: 488 NVENVMQIAHEMVTKKYVIGLE-SFSVLVKQLCAKGKVTEAEKLF 531
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 133/303 (43%), Gaps = 8/303 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A GFF WVG GY H +Y+ ++ +L + + W ++ +M + G M + T K
Sbjct: 1467 VAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTK 1526
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R+ +A+ F M + ++LL ++ + V R ++
Sbjct: 1527 VMRRLAGASRWTEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERS-----VKRARGVFQE 1581
Query: 367 LGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L ++ ++ ++ + K EA M+ MK GF P +TY+ ++ C F
Sbjct: 1582 LRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDF 1641
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ +LDEM + C P++ T+TIL+ A AL F K+ E DA + L
Sbjct: 1642 QTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSL 1701
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I R+ AY ++ EM + P TF TLI + E A+ LL M++Q+
Sbjct: 1702 IYILGRAGRLEDAYSVVEEM-RTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQS 1760
Query: 545 YPP 547
P
Sbjct: 1761 CNP 1763
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 102/460 (22%), Positives = 188/460 (40%), Gaps = 49/460 (10%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
S ++T V +L + ND A FF WV + + + Y LM+ L W
Sbjct: 1447 SVRVTGCLVDKILTRFSNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1506
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD----GMVKEIAMDNVAKT 205
+ +M E + T ++ L A + ++ A++ FH G+VK+ NV
Sbjct: 1507 GLINQMVEVGGLMSLMTMTKVMRRLAGASRWTE--AIDAFHKMDRFGVVKDTKAMNVL-- 1562
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR--IYPVKALGFFRWVGEHSGYK 263
L+ + E S V +ELR I P
Sbjct: 1563 -----------------LDTLCKERSVKRARGVFQELRGTIPP----------------- 1588
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ ++N ++ + +++ + +EEMK+ G+ + TY + + + + L
Sbjct: 1589 -DENSFNTLVHGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYAL 1647
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M P+V ++L+ ++ L +K + G + S Y+ + L
Sbjct: 1648 LDEMRKRRCPPNVVTYTILMHALGKAGRTREAL--DTFDKLKEDGVAPDASFYNSLIYIL 1705
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ GR ++A +++ M+ G P+ T++ +I C + E+A +L +MEE C PDI
Sbjct: 1706 GRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDI 1765
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
KT+T L++ C V L M K+ D +L++ +V + L E
Sbjct: 1766 KTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEE 1825
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
M+ K P Q TF ++EK L R L+ +++++ Q
Sbjct: 1826 MVSK-GFAPKQETFDLVMEK-LEKRNLQSVYKKIQVLRTQ 1863
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 85/200 (42%), Gaps = 6/200 (3%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+Y ++ L K +F+ ++++M E G + + T T +++ A+ A+ F KM
Sbjct: 1488 SYDLMVDILGKFKQFDLMWGLINQMVEVGGLMSLMTMTKVMRRLAGASRWTEAIDAFHKM 1547
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
D ++VL++ ++ V A + E+ + + P + +F TL+ AR
Sbjct: 1548 DRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQEL--RGTIPPDENSFNTLVHGWCKARM 1605
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS----VKEYPSSAAYLQ 585
L+EA++ + MK+ + P + + + +D L + P+ Y
Sbjct: 1606 LKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTI 1665
Query: 586 VFESFFNEGRHYEAKDLLYK 605
+ + GR EA D K
Sbjct: 1666 LMHALGKAGRTREALDTFDK 1685
>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 804
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 196/460 (42%), Gaps = 44/460 (9%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 166 LKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 225
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 226 VLFLRTSEWKD-IGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLK-CGLVP--------- 274
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY + + F
Sbjct: 275 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLG 325
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
M+ A ++ + M+D P V ++LL + N D+GL+ + S G L +
Sbjct: 326 MISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLI--LLKDMLSRGFELKSII 383
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K GR DEA + ++ G PD + YS VI GLCK G+F+ A V DEM
Sbjct: 384 PYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEM 443
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+P+ +T ++ G C + A ++ D L +++I+G+ +
Sbjct: 444 CYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCI 503
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A +L IE + P ATF +LI + + EA +L ++K P +
Sbjct: 504 EEALELFKVAIES-GITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTT 562
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+ + G+++ E + + + P++ Y +F+
Sbjct: 563 LMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGL 602
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/348 (19%), Positives = 143/348 (41%), Gaps = 23/348 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ I Y+ +L L + V + ++ +++ G D+ Y + K + AV+++
Sbjct: 381 SIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVY 440
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHR 381
+ M P+ + ++ + G++ + +SL G++L +Y+ +
Sbjct: 441 DEMCYKRILPNSRTLGAIMLGLCQ-----KGMLLEARSLLDSLISSGDTLDIILYNIVID 495
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K G +EA ++ K +G P+ T++ +I+G CK +A +LD ++ G +P
Sbjct: 496 GYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVP 555
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ ++T L+ + + +M + V+ G ++ ++L
Sbjct: 556 SVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVL 615
Query: 502 VEMI-----------EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
E I E + P Q T+ T+I+ L + L A L + MK QN P
Sbjct: 616 RERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSA 675
Query: 551 PF---VQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEG 594
+ + + +G + A FL +L + S AY V ++ +G
Sbjct: 676 TYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKG 723
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 108/249 (43%), Gaps = 11/249 (4%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL F+ V SG N T+N ++ + +++ + +++ +K G + +Y +
Sbjct: 505 EALELFK-VAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTL 563
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS---SINNPDLGLVFRVANKY 364
+ ++ +L M P+ S++ + + + N + L R+ K+
Sbjct: 564 MDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKF 623
Query: 365 -------ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
ES G + + Y+ I + L ++ A ++ K MK+ +P + TY+ +I
Sbjct: 624 NHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDS 683
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LC G A L +++ +T +I+ HC + + A++ F +++++ ++
Sbjct: 684 LCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDRGFNVS 743
Query: 478 ADLLDVLIN 486
+IN
Sbjct: 744 IRDYSAVIN 752
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 148/301 (49%), Gaps = 10/301 (3%)
Query: 251 GFFRWVG-EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
GF + G GY N +TYN +++ L + + + M+K G D+ TY + +
Sbjct: 123 GFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIK 182
Query: 310 QFQKFRMMEDAVKLFEFMMDG------PYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ A+KL + M++ KP+V ++++ + + D ++ +
Sbjct: 183 GLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAK--QLFEE 240
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
++ G S Y+ + G+++E+++++ M + G +PD +T++ +I LCK G+
Sbjct: 241 MKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGK 300
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A +L M E+G +PD+ T+ LI+G C +++ A F M K + D +V
Sbjct: 301 VIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNV 360
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LING+ +V A KL EM+ V RP T+ +L++ + A ++++A L +MK
Sbjct: 361 LINGYSKTLKVEEAMKLYNEML-LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAH 419
Query: 544 N 544
Sbjct: 420 G 420
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 145/322 (45%), Gaps = 12/322 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + T N +L L +R+ + + + GY +I TY + + + +
Sbjct: 98 SGLSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISE 157
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-----VFRVANKYESLGNSLSKS 374
A +LF M P V L++ + N ++ L + ++YE + +
Sbjct: 158 ATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE-INCKPNVI 216
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ I L K+GR DEA+++ + MK G P I+Y+ +I G C AG++E++ +LDEM
Sbjct: 217 TYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEM 276
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G PD+ T+ +LI C +V A M+E D + LI GF +
Sbjct: 277 LDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDL 336
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL----LRLMKKQNYPPFPE 550
N A +L V M K P ++ LI ++EEAM L L + K+ N + +
Sbjct: 337 NSARELFVSMPSK-GCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITY-D 394
Query: 551 PFVQYISKFGTVEDASEFLKAL 572
++ I G V+DA + +
Sbjct: 395 SLLKGIFLAGKVDDAKKLFSVM 416
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 136/322 (42%), Gaps = 16/322 (4%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ F MM PS+ + LL ++ I + VF + N+ G S + + +
Sbjct: 53 ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKH--YSQVFSLYNQMRLSGLSSDRCTLNIL 110
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + R E + G+ P+ +TY+ +I GLC R +A + M++ GC
Sbjct: 111 LNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGC 170
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMM------EKNYDADADLLDVLINGFLSQKR 493
PD+ T+ LI+G C ++ AL +M+ E N + +++++G R
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
+ A +L EM + + P ++ +LI A + EE+ LL M Q P F
Sbjct: 231 EDEAKQLFEEM-KTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFN 289
Query: 553 --VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
+ + K G V +A + L + P Y + E F G A++L P
Sbjct: 290 VLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSK 349
Query: 610 IRQDSKIS---LLFGSAKSNKV 628
+ IS L+ G +K+ KV
Sbjct: 350 GCEPDVISYNVLINGYSKTLKV 371
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 141/315 (44%), Gaps = 18/315 (5%)
Query: 237 TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
T+ KE ++ K L V SG + +TYN ++ + + M +G
Sbjct: 294 TLCKEGKVIEAKKL---LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG 350
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLG 355
E D+ +Y + + K +E+A+KL+ M+ +P+V LL+ I D
Sbjct: 351 CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAK 410
Query: 356 LVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+F V + NS + ++ DG L K EA K+ +K++ F+ + + +
Sbjct: 411 KLFSVMKAHGIAENSYTYGIFLDG----LCKNDCLFEAMKLFTELKSSNFKLEIENLNCL 466
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I GLCKAG+ E A + +++ G P++ T+TI+I G C +VD+A + KM
Sbjct: 467 IDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGC 526
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D + L+ GF ++ +LL M +K + P T +++ L + +E +
Sbjct: 527 TPDIITYNTLMRGFYESNKLEEVVQLLHRMAQK-DVSPDAITCSIVVDMLSKDEKYQECL 585
Query: 535 NLLRLMKKQNYPPFP 549
+LL P FP
Sbjct: 586 HLL--------PRFP 592
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 158/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + + ++G++ +RD ++ + + DT K+
Sbjct: 35 ASAVFAAIVETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 94
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 95 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 152
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 153 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 213 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 272
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 273 LCKKGDLKQAHHLIDEMSMK-ELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 331
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ L+V P S Y + F +G ++ LL
Sbjct: 332 DEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKLL 391
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 153 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 213 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 267
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M +PD ITY+ +I G CK G + A M +
Sbjct: 268 TLIYGLCKKGDLKQAHHLIDEMSMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQE 327
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D+ ++IN F + V
Sbjct: 328 NIRLDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKG 387
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 388 SKLLKEM 394
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 46/82 (56%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + Y + L + GR +AEKM++ M N G +PD+ TY+ +I CK G +
Sbjct: 331 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDSRTYTMIINEFCKKGDVWKGSKL 390
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ +G +P + T+ +L+ G
Sbjct: 391 LKEMQRDGHVPSVVTYNVLMNG 412
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 180/408 (44%), Gaps = 62/408 (15%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE-- 291
++ VL +R PV AL FFRW +G+K + I+Y+ IL +LAR+ +R + V+E+
Sbjct: 49 LLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVV 108
Query: 292 -MKKEGYEMDIDTYIKISRQ------------FQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+K E +D+ + ++S + K ++E + +F M+ P V++
Sbjct: 109 SVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKN 168
Query: 339 CSLLLRSISSI-NNPDL------------------------------GLV---FRVANKY 364
C+ +LR + NN D+ G+V ++ +
Sbjct: 169 CNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQM 228
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+++G S + Y+ + L+ G ++A+++++ M G E TY +I G C+ G+
Sbjct: 229 QAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQI 288
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E+A + +EM G +P + T+ ++ G C V A M+ KN D + L
Sbjct: 289 EEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 348
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G+ + A+ L E+ + L P T+ TLI+ L L+ AM L M K
Sbjct: 349 IYGYTRLGNIGEAFLLFAELRYR-SLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407
Query: 545 YPPFPEP-------FVQYISKFGTVEDASE-FLKALSVKEYPSSAAYL 584
P+P FV+ K G + A E F + L+ P AY+
Sbjct: 408 ----PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYI 451
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ L R + + +EM K G + D+ T+ R F K + A +LF
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M++ +P + + R + + D F + + + G Y+ L
Sbjct: 436 DEMLNRGLQP--DRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLH 493
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KLG EA +++K M G PD++TY+ +I AG A + EM G P +
Sbjct: 494 KLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVV 553
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T+LI + + A+L F +M EK + + LING ++++ AY EM
Sbjct: 554 TYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEM 613
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K + P + T+ LI + +EA+ L + M + P
Sbjct: 614 QAK-GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 655
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 220/540 (40%), Gaps = 76/540 (14%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
PKL +V VL + N P A FF W + F+ S YS++L +++ ++ L
Sbjct: 47 PKL----LVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVIL-DILARNGL----- 96
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
M+ +C +E+ V + M+N ++DVV
Sbjct: 97 ----MRSAYCVMEK-----------------------------VVSVKMEN---GVIDVV 120
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
S+ + ++L + +L + + + L F++ V + G + N
Sbjct: 121 SSSE--------VSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSK--GLLPDVKNCN 170
Query: 271 GILRVLARHES----VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+LR+L ++ R+ +NV+ E G + TY + F K M+++A++L
Sbjct: 171 RVLRLLRDRDNNIDVAREVYNVMVEC---GICPTVVTYNTMLDSFCKKGMVQEALQLLFQ 227
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M P+ ++L+ +S ++ ++ + LG +S YD + R +
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLS--HSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEK 285
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ +EA ++ + M + G P +TY+ +++GLCK GR DA +LD M +PD+ ++
Sbjct: 286 GQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSY 345
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI G+ + A L FA++ ++ + LI+G ++ A +L EMI
Sbjct: 346 NTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMI- 404
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVE 563
K P TF T + L A L M + P ++ I K G
Sbjct: 405 KHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 464
Query: 564 DASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLLYK------CPHHIRQDSKI 616
A + + + +P VF + G EA +L+ K P H+ S I
Sbjct: 465 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 151/345 (43%), Gaps = 19/345 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN ++ L+ + ++++M + G E+ + TY + R + + +E+A
Sbjct: 232 GCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEA 291
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+L E M+ P+V + ++ + RV++ + L ++K++
Sbjct: 292 SRLGEEMLSRGAVPTVVTYNTIMYGLCKWG--------RVSDARKLLDVMVNKNLMPDLV 343
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + T+LG EA + ++ P +TY+ +I GLC+ G + A + DEM
Sbjct: 344 SYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEM 403
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++G PD+ T+T ++G C + A F +M+ + D I G L
Sbjct: 404 IKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDP 463
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A+ + EM+ + P T+ I+ L L+EA L++ M P +
Sbjct: 464 SKAFGMQEEMLAR-GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTS 522
Query: 555 YISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
I G + A + FL+ LS +PS Y + S+ GR
Sbjct: 523 IIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGR 567
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 96/246 (39%), Gaps = 39/246 (15%)
Query: 234 FVLTVLKELRIY-PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
++ ++ EL++ P KA G + G+ + ITYN + L + ++++ +V++M
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLAR-GFPPDLITYNVFIDGLHKLGNLKEASELVKKM 508
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
G D TY I + A LF M+ PSV ++L+ S +
Sbjct: 509 LYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAV---- 564
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
GR A M G P+ ITY+
Sbjct: 565 ---------------------------------RGRLKLAILHFFEMHEKGVHPNVITYN 591
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I GLCK + + A N EM+ G P+ T+TILI +C AL + M+++
Sbjct: 592 ALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDR 651
Query: 473 NYDADA 478
D+
Sbjct: 652 EIQPDS 657
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 156/367 (42%), Gaps = 16/367 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E GY + I+Y+ ++ R + W ++E+MK++G + + TY I + +
Sbjct: 696 ELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKL 755
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK--YESLGNSLSKSV 375
+A + F M+ P + L+ + R A+K YE ++ V
Sbjct: 756 AEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGD------IRAASKFFYEMHSRDITPDV 809
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y I ++G EA K+ M G EPD IT+++++ G CKAG +DA V +
Sbjct: 810 LTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNH 869
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + GC P++ T+T LI G C ++D A +M + + + ++NG
Sbjct: 870 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 929
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
+ A KL+ E E L T+ TL++ + +++A +L M + P F
Sbjct: 930 IEEAVKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFN 988
Query: 554 QYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK--CPH 608
++ F G +ED + L + K +A + + +A +YK C
Sbjct: 989 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048
Query: 609 HIRQDSK 615
+ D K
Sbjct: 1049 GVEPDGK 1055
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 147/351 (41%), Gaps = 15/351 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +TI Y ++ + +R EM D+ TY I F + M +A
Sbjct: 769 GILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 828
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M+ +P + + L+ + + FRV N G S + Y +
Sbjct: 829 GKLFHEMLCRGLEPDIITFTELMNGYCKAGH--IKDAFRVHNHMIQAGCSPNVVTYTTLI 886
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G D A +++ M G +P+ TY+ ++ GLCK+G E+A ++ E E G
Sbjct: 887 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 946
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D T+T L+ +C + E+D+A +M+ K +VL+NGF + KL
Sbjct: 947 ADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1006
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L M+ K + P TF L+++ L+ A + + M + P + + +
Sbjct: 1007 LNWMLAK-GIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065
Query: 561 TVEDASE--FL------KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E FL K SV S + Y + + FF + EA+++
Sbjct: 1066 NARNMKEAWFLFQEMKGKGFSV----SVSTYSVLIKGFFKRKKFVEAREIF 1112
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +YN ++ + + + + +++ M+ +GY D+ +Y + + +F ++
Sbjct: 664 GVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKV 723
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL E M KP N Y Y I
Sbjct: 724 WKLIEKMKQKGLKP---------------------------NSY----------TYGSII 746
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L ++ + EAE+ M G PD I Y+ ++ G CK G A EM
Sbjct: 747 GLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT 806
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T +I G C ++ A F +M+ + + D L+NG+ + A+++
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYIS 557
MI+ P T+ TLI+ L L+ A LL M K P V +
Sbjct: 867 HNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLC 925
Query: 558 KFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDLL 603
K G +E+A + + + + Y + +++ G +A+++L
Sbjct: 926 KSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 137/299 (45%), Gaps = 10/299 (3%)
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNS 370
+F M+ +A K+FE M++ SV C++ L +S N +VFR ++ +G
Sbjct: 610 EFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFR---EFPEVGVC 666
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ + Y+ + + +LGR +EA ++ M+ G+ PD I+YS VI G C+ G + +
Sbjct: 667 WNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKL 726
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+++M++ G P+ T+ +I C ++ A F++M+ + D + L++GF
Sbjct: 727 IEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCK 786
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ + A K EM + + P T+ +I + EA L M + P
Sbjct: 787 RGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII 845
Query: 551 PFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F + ++ + G ++DA + P+ Y + + EG A +LL++
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 904
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 166/430 (38%), Gaps = 60/430 (13%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K + P YS ++ L + W + +MK+ TY SI+G+L + K ++
Sbjct: 698 KGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAE 757
Query: 183 LAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
A F + + + I D + TLVD K +M VLT
Sbjct: 758 --AEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLT---- 811
Query: 242 LRIYPVKALGFFRWVGEH------------SGYKHNTITYNGILRVLARHESVRDFWNVV 289
Y GF + +G+ G + + IT+ ++ + ++D + V
Sbjct: 812 ---YTAIISGFCQ-IGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVH 867
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
M + G ++ TY + K ++ A +L M +P++ + ++ +
Sbjct: 868 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 927
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
N + + ++ ++E+ G + Y + A K G D+A++++ M G +P +
Sbjct: 928 GNIEEAV--KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIV 985
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENG---------------CI-------------- 440
T++ ++ G C G ED +L+ M G CI
Sbjct: 986 TFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDM 1045
Query: 441 ------PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
PD KT+ L++GHC A + A F +M K + VLI GF +K+
Sbjct: 1046 CSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKF 1105
Query: 495 NGAYKLLVEM 504
A ++ +M
Sbjct: 1106 VEAREIFDQM 1115
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 105/246 (42%), Gaps = 2/246 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN I+ L + ++ + +V E + G D TY + + K M+ A
Sbjct: 909 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 968
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ M+ +P++ ++L+ + G ++ N + G + + + ++ +
Sbjct: 969 QEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE--KLLNWMLAKGIAPNATTFNCLV 1026
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ A + K M + G EPD TY ++ G C A ++A + EM+ G
Sbjct: 1027 KQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFS 1086
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+++LI+G + A F +M AD ++ D + KR +
Sbjct: 1087 VSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDTKYKGKRPDTIVDP 1146
Query: 501 LVEMIE 506
+ E+IE
Sbjct: 1147 IDEIIE 1152
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 167/371 (45%), Gaps = 33/371 (8%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA F+ + + +G + Y ++ + + N +EM+++G ++ TY +
Sbjct: 240 KAFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTAL 298
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS------------------SI 349
+ K R + A +++E M+ P++ + L+ + ++
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
PD+ + FRV + + N + Y + L K + EA ++K+M G EP+++
Sbjct: 359 EIPDVDMHFRVVDGASNEPNVFT---YGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHV 415
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y +I G CKAG+ ++A V M E G P++ T++ LI +D AL +KM
Sbjct: 416 VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+E + + + +I+G + + AYKL+V M+E+ P T+ +I+ + R
Sbjct: 476 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV-MMEEKGCNPNVVTYTAMIDGFGKSGR 534
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQY------ISKFGTVEDASEFLKALSVKEYPSS-AA 582
+E+ + LL+ M + P FV Y G +++A + L+ + +P A
Sbjct: 535 VEKCLELLQQMSSKGCAP---NFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAG 591
Query: 583 YLQVFESFFNE 593
Y +V E F E
Sbjct: 592 YRKVIEGFNRE 602
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 157/370 (42%), Gaps = 36/370 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ L V + + +EMK+ G D+ Y + F K +E A
Sbjct: 217 GFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQA 276
Query: 321 VKLFEFMMDGPYKPSVQDCSLLL------RSISSINNPDLGLVFRVANKYESLGNSLSKS 374
F+ M P+V + L+ R +S N V S G + +
Sbjct: 277 RNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKAN--------EVYEMMLSKGCTPNIV 328
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMK-----------------NAGFEPDNITYSQVIFG 417
Y + L K G+ ++A ++ K MK A EP+ TY ++ G
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCKA + ++A ++L M GC P+ + LI G C A ++D A F M+E YD +
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
LI+ KR++ A K+L +M+E P + +I+ L + +EA L+
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLEN-SCAPNVVIYTEMIDGLCKVGKTDEAYKLM 507
Query: 538 RLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKEY-PSSAAYLQVFESFFNE 593
+M+++ P + I FG VE E L+ +S K P+ Y + +
Sbjct: 508 VMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCST 567
Query: 594 GRHYEAKDLL 603
G EA LL
Sbjct: 568 GLLDEAHKLL 577
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 159/364 (43%), Gaps = 27/364 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L E + ++ M EG + + + + A KL
Sbjct: 76 NVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLL 135
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPD---LGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M+ +P ++L+ I S P L L + + G L+K R
Sbjct: 136 KKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSR 195
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L +G+F++A +++ M + GF PD TYS+VI LC A + E A + EM+ NG P
Sbjct: 196 CLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAP 255
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ +T LI C A +++A F +M + LI+ +L ++V+ A ++
Sbjct: 256 DVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVY 315
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP------------ 549
M+ K P T+ LI+ L A ++E+A + ++MKK+N P
Sbjct: 316 EMMLSK-GCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV-EIPDVDMHFRVVDGA 373
Query: 550 --EP-------FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
EP V + K V++A + LK++SV+ P+ Y + + G+ EA
Sbjct: 374 SNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEA 433
Query: 600 KDLL 603
+++
Sbjct: 434 QEVF 437
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 189/429 (44%), Gaps = 25/429 (5%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA F + + P VY+ ++ + ++Q M+ D C TY +
Sbjct: 239 EKAFQLFQEM-KRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTA 297
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
++ K++K S N+ ++ M+ + N+ T ++ G KI K + KI
Sbjct: 298 LIHAYLKSRKVSK---ANEVYEMMLSKGCTPNIV-TYTALIDGLCKAGKIEKASQIYKIM 353
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+N + I V FR V S + N TY ++ L + V++ +++
Sbjct: 354 KKEN--------VEIPDVDM--HFRVVDGASN-EPNVFTYGALVDGLCKAYQVKEARDLL 402
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+ M EG E + Y + K +++A ++F M++ Y P+V S L+ +
Sbjct: 403 KSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRL--F 460
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ L L +V +K L NS + +V Y + L K+G+ DEA K+M M+ G P+
Sbjct: 461 KDKRLDLALKVLSKM--LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPN 518
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY+ +I G K+GR E +L +M GC P+ T+ +LI C+ +D A
Sbjct: 519 VVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLE 578
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M + + +I GF + + L E+ E + P ++ LI+ + A
Sbjct: 579 EMKQTYWPRHVAGYRKVIEGF--NREFIASLYLSFEISENDSV-PVAPVYRVLIDNFIKA 635
Query: 528 RRLEEAMNL 536
RLE A+ L
Sbjct: 636 GRLEIALEL 644
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 104/238 (43%), Gaps = 21/238 (8%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
++G + + +L K G++ EA + ++ F PD + Y+++I GLC+A FE
Sbjct: 3 TMGYRMDEFTLGCFAHSLCKSGKWREA---LSLLEKEEFVPDTVLYTKMISGLCEASLFE 59
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A + L M + C+P++ T+ IL+ G ++ R + M+ + + + L+
Sbjct: 60 EAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLV 119
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ + AYKLL +M++ +P + LI + + E ++L L +K
Sbjct: 120 HAYCRSGDYAYAYKLLKKMVQ-CGCQPGYVVYNILIGGICSSE--EPGKDVLDLAEKA-- 174
Query: 546 PPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+G + +A L +++ + + FE +N R +K +
Sbjct: 175 -------------YGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFI 219
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 67/149 (44%), Gaps = 4/149 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G+ D T LCK+G++ +A ++L++ E +PD +T +I G C A+
Sbjct: 1 MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLEKEEF---VPDTVLYTKMISGLCEASL 57
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ A+ +M + + +L+ G L+++++ ++L MI + P F
Sbjct: 58 FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITE-GCYPSPRIFN 116
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L+ + A LL+ M + P
Sbjct: 117 SLVHAYCRSGDYAYAYKLLKKMVQCGCQP 145
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 172/364 (47%), Gaps = 19/364 (5%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ + YK T+ ++ A + V++ M+ E + ++ I + +
Sbjct: 46 IFKSGPKMGSYKLGDSTFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAY 105
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYESL-- 367
K + E AV LF+ M Y+ +C ++S +S+ N + GL +R Y +
Sbjct: 106 GKAHLPEKAVGLFDRM---AYE---FECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIG 159
Query: 368 --GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G ++S +V ++ + + + K+G D+A +M + M + +PD TY ++ GLCKA R
Sbjct: 160 AKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADR 219
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++LDEM+ +GC P T+ +LI G C ++ R M K + +
Sbjct: 220 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNT 279
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI+G + ++ A LL M+ + P T+ T+I L+ R + +L LM+++
Sbjct: 280 LIHGLCLKGKLEKAISLLDRMVSS-KCVPNVVTYGTIINGLVKQGRALDGARVLALMEER 338
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEA 599
Y + IS K G ++A + K ++VKE ++ Y V + +G+ EA
Sbjct: 339 GYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEA 398
Query: 600 KDLL 603
++L
Sbjct: 399 LEVL 402
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 104/442 (23%), Positives = 190/442 (42%), Gaps = 43/442 (9%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKASDLA 184
+P Y ++ L D + + L M+ D C+ T+ + I G+ KK DLA
Sbjct: 201 QPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG----DLA 256
Query: 185 ALNQFHDGM-VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
+ + D M +K A + V T ++ G K+ K + + +S V V+
Sbjct: 257 RVAKLVDNMFLKGCAPNEV--TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGT 314
Query: 244 IY-----PVKALGFFRWVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
I +AL R + E GY N Y+ ++ L + ++ + +EM +
Sbjct: 315 IINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKE 374
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
E++ Y + + ++A+++ M + KP+ S L++ N +
Sbjct: 375 CELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAI 434
Query: 357 -VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+++ K+ N + SV IH L K G+ EA + M G +PD + Y +I
Sbjct: 435 EMWKDMAKHNFTQNEVCYSVL--IH-GLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMI 491
Query: 416 FGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
GL AG EDA + +EM +E PD+ T+ IL+ C + + RA+ M+++
Sbjct: 492 NGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRG 551
Query: 474 YDADA---------------------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
D D + LD L+ L ++RV GA K++ M++K+ L P
Sbjct: 552 CDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKL-LPP 610
Query: 513 WQATFKTLIEKLLGARRLEEAM 534
+T+ ++E L ++++ A+
Sbjct: 611 KPSTWTRVVEDLCNPKKVQAAI 632
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 128/287 (44%), Gaps = 5/287 (1%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+T+N ++ L + + +V+ M +G + TY + +E A+ L +
Sbjct: 240 VTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDR 299
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M+ P+V ++ + G RV E G +++ VY + L K
Sbjct: 300 MVSSKCVPNVVTYGTIINGLVKQGRALDGA--RVLALMEERGYHVNEYVYSALISGLFKE 357
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA ++ K M E + I YS VI GLC+ G+ ++A VL EM N C P+ T+
Sbjct: 358 GKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTY 417
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ L++G A +A+ + M + N+ + VLI+G +V A + +M+
Sbjct: 418 SSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLG 477
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
K +P + ++I L A +E+A+ L M Q P +P V
Sbjct: 478 K-GCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQE--PDSQPDV 521
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 150/340 (44%), Gaps = 7/340 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
++G++ +RD ++ + + DT K+ K + + +E +
Sbjct: 57 VFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 116
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ Y S+ ++L+ + D+ + V + G S Y+ + +LG
Sbjct: 117 LECGYPASLYFFNILMHRFC--KDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLG 174
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
DE ++ AM +G +PD TYS +I GLCK + +DA + DEM G +P+ T+T
Sbjct: 175 DLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSVTFT 234
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI GHC VD A+ + +M+ ++ D + LI G + + A+ L+ EM K
Sbjct: 235 TLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMK 294
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
L+P + T+ TLI+ L+ A + M ++N + IS G D
Sbjct: 295 -GLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVD 353
Query: 565 ASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
A + L+ LSV P + Y + F +G ++ LL
Sbjct: 354 AEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 10/248 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K ++DA
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 215 NELFDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 269
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EE 436
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +E
Sbjct: 270 TLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQE 329
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N + D+ +T LI G C A +M+ DA ++IN F + V
Sbjct: 330 NTRLDDV-VYTALISGLCREGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWK 388
Query: 497 AYKLLVEM 504
KLL EM
Sbjct: 389 GSKLLKEM 396
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTT------------------ 305
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K + DL F + L VY + L
Sbjct: 306 --LIDGCCK-----------------DGDLDTAFEHRKRMIQENTRLDDVVYTALISGLC 346
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 347 REGXSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 406
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 407 TYNVLMNG 414
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I K L + I LS + V VL + + FF W G + +Y+ ILR L R
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ +V++ M EG D++ F + + A++LFE K S +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ LLR + ++ A K +S S Y+ + +KLG +E EK++K
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS---YNIMISGWSKLGEVEEMEKVLKE 280
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M +GF PD ++YS +I GL + GR D+ + D ++ G +PD + +I +A +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
D ++ + +M+++ + + + L++G + ++V+ A ++ EM+ +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+H G + YN ++ S RDF M E E +++TY K+ K
Sbjct: 317 KHKGNVPDANVYNAMI---CNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
R + DA+++FE M+ P+ + L+ + S P +V + K G +S+S
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV--IYQKSRKAGCRISES 431
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + + L++ G+ + M+ +G+ D Y ++ GLC G E+A V++E
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
G P+ ++ L A+N+ + A F K+
Sbjct: 492 MRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI 526
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG+ + ++Y+ ++ L R + D + + +K +G D + Y + F R ++
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+++ + M+D +P+++ S L+ + I + + + S G + +
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGL--IKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ L G A + + + AG Y ++ L + G+ NV DEM+E+G
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D++ + ++ G C ++ A+L + M K + + + L + ++ + AYK
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYK 521
Query: 500 LLVEMIEKVR 509
L ++ I+K R
Sbjct: 522 LFLK-IKKAR 530
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 173/393 (44%), Gaps = 24/393 (6%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ + YK T+ ++ A + V + MK+E +I + R +
Sbjct: 50 IFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAY 109
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYE-SLG 368
K + E A++LF M+D C +RS +S+ N + GL R YE +G
Sbjct: 110 GKAHLPEKAIELFGRMVDE------FQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVG 163
Query: 369 N--SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
++S +V ++ + +A+ KLG D A ++ + M EPD TY ++ GLCK R
Sbjct: 164 GKTNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRI 223
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A +LDEM+ GC P T+ +LI G C ++ R M K + + +
Sbjct: 224 DEAVLLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTI 283
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
ING + +++ A LL M+ + P T+ TLI L+ R + ++LL ++++
Sbjct: 284 INGLCLKGKLDKAVSLLDRMVAS-KCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERG 342
Query: 545 YPPFPEPFVQYISKFGTVEDASEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ + IS E + E + K + P+ Y + + EG+ EAK
Sbjct: 343 HHANEYAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAK 402
Query: 601 DLLYK-----C-PHHIRQDSKISLLFGSAKSNK 627
++L + C P+ S I F + S K
Sbjct: 403 EILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQK 435
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 96/206 (46%), Gaps = 5/206 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
VY + L + G+ DEA++++ M N G P+ TYS +I G K G + A V EM
Sbjct: 384 VYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEM 443
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+N C+P+ +++LI G C ++ A++ + M+ + D +I+G + V
Sbjct: 444 AKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSV 503
Query: 495 NGAYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
KL EM+ ++ +P T+ L+ L + A++LL M + P
Sbjct: 504 EVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCN 563
Query: 551 PFVQYI-SKFGTVEDASEFLKALSVK 575
F+ + K +D EFL L V+
Sbjct: 564 IFLNALREKLNPPQDGREFLDELVVR 589
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 148/315 (46%), Gaps = 4/315 (1%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
S VL VL +L V AL FFRW + S +KH T ++ ++ L + + W +V
Sbjct: 85 SPELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVN 144
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+MK+ + DT+ ++R++ + R ++A+K FE M KP V D + L+ +
Sbjct: 145 DMKQRKL-LTSDTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFNKLVDVLC--K 201
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ + V +K L Y + ++ + ++ + M++ GF+ D +
Sbjct: 202 SKSVEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVA 261
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y ++ CKA +F++A + EM+ G P + LI G + +D AL F
Sbjct: 262 YGIIMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSK 321
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ +A + ++ + R++ AY+++ EM +K + P TF ++ L+ RR+
Sbjct: 322 ASGFVPEAPTYNAVVGAYCWSLRMDDAYRMVGEM-KKCGIGPNSRTFDIVLHHLIKGRRI 380
Query: 531 EEAMNLLRLMKKQNY 545
EEA ++ R M +
Sbjct: 381 EEASSVFRRMNGGEF 395
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 210/516 (40%), Gaps = 61/516 (11%)
Query: 43 ASNQSHTSQFHINTCQKI--------FFSTSPNSSLELILACDWSDELENKLEELSPKLT 94
+++HT FH + ST+P S+++ LA + K +
Sbjct: 38 GPSKTHTLAFHTAQPRPTPDAEAICRILSTTPASTVDACLAA------------VPAKPS 85
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRR 154
E V+ VL KL N A +FF W + +F+ ++ + ++ L K W +
Sbjct: 86 PELVLEVLNKLSNAGVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVND 145
Query: 155 MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLVDVVLGS 213
MK+ + L + K + + H G+ ++ N LVDV+ S
Sbjct: 146 MKQRKLLTSDTFSLVARRYARARKAKEAIKTFEKMEHYGLKPHVSDFN---KLVDVLCKS 202
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
K +E+ + V +++LR+ P + +Y +L
Sbjct: 203 -------KSVEEA------HEVFDKMRKLRLDP------------------DIKSYTILL 231
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
++ +++ V EM+ +G+++D+ Y I K + ++A+ L+ M +
Sbjct: 232 EGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVR 291
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS L+ + S D L F +K + G Y+ + A R D+A
Sbjct: 292 PSPHVYCTLINGLGSDKRLDEALEFFEVSK--ASGFVPEAPTYNAVVGAYCWSLRMDDAY 349
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME--ENGCIPDIKTWTILIQ 451
+M+ MK G P++ T+ V+ L K R E+A +V M E GC P + T+ I+++
Sbjct: 350 RMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVR 409
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C +D A+ + +M K + L+ + +++ A K EM++ V +R
Sbjct: 410 MFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLD-VGIR 468
Query: 512 PWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYP 546
P F TL E L+ A AM+ L++ K + P
Sbjct: 469 PPAKMFSTLKEALVDAGMEHVAMHFTLKIDKLRKSP 504
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 105/244 (43%), Gaps = 42/244 (17%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA K + M++ G +P +++++ LCK+ E+A V D+M + PDIK++TIL+
Sbjct: 172 EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRKLRLDPDIKSYTILL 231
Query: 451 QG-----------------------------------HCAANEVDRALLCFAKMMEKNYD 475
+G HC A + D A+ + +M +
Sbjct: 232 EGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGVR 291
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ LING S KR++ A + E+ + P T+ ++ + R+++A
Sbjct: 292 PSPHVYCTLINGLGSDKRLDEALEFF-EVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYR 350
Query: 536 LLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY---PSSAAYLQVFES 589
++ MKK P F + ++ K +E+AS + ++ E+ PS + Y +
Sbjct: 351 MVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRM 410
Query: 590 FFNE 593
F NE
Sbjct: 411 FCNE 414
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 16/363 (4%)
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++NV++ L + W + L ++ + VLK+++ +PV ALGFF W+
Sbjct: 317 VENVSRILRQL----SWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPV-ALGFFYWLKR 371
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G+KH+ TY ++ +L R ++ EM ++G + ++ TY ++ + + +
Sbjct: 372 QTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLN 431
Query: 319 DAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+AV +F+ M + +P V C+L+ + + + L + + K + S Y
Sbjct: 432 EAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGF----LDVALHMYQKMQEAHLSPDTFTY 487
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K G A K+ M + G P+ +TY+ +I KA + A + +M+
Sbjct: 488 SVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQN 547
Query: 437 NGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G PD T++I+++ GHC E A+ F +M KN+ D + +L++ + V
Sbjct: 548 AGFQPDKVTYSIVMEVLGHCGHLEEAEAI--FTEMKRKNWVPDEPVYGLLVDLWGKVGNV 605
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+++ M+ L P T +L+ L RL +A NLL+ M + P + +
Sbjct: 606 EKSWEWYQAML-NAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 664
Query: 555 YIS 557
+S
Sbjct: 665 LLS 667
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 43/260 (16%)
Query: 386 LGR---FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
LGR F K++ M G +P+ +TY+++I +A +A +V D M+E GC PD
Sbjct: 389 LGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPD 448
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D AL + KM E + D V+IN + A+KL
Sbjct: 449 RVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFC 508
Query: 503 EMIEK----------------------------------VRLRPWQATFKTLIEKLLGAR 528
EM+++ +P + T+ ++E L
Sbjct: 509 EMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCG 568
Query: 529 RLEEAMNLLRLMKKQNYPPFPEP----FVQYISKFGTVEDASEFLKA-LSVKEYPSSAAY 583
LEEA + MK++N+ P EP V K G VE + E+ +A L+ P+
Sbjct: 569 HLEEAEAIFTEMKRKNWVP-DEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTC 627
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ +F R +A +LL
Sbjct: 628 NSLLSAFLRVHRLSDAYNLL 647
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P+ Y+ ++ + + L + RM+E C + TY +++ + KA A
Sbjct: 411 QPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLD--VA 468
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLTV 238
L+ + ++ D +++ LG KL ++ ++ N ++ +
Sbjct: 469 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIAL 528
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+ R YP AL +R + +++G++ + +TY+ ++ VL + + + EMK++ +
Sbjct: 529 QAKARNYPT-ALELYRDM-QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWV 586
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
D Y + + K +E + + ++ M++ P+V C+ LL +
Sbjct: 587 PDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSA 633
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 132/286 (46%), Gaps = 3/286 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + ITYN ++ + V + + + EM K+G E D TY + + +++A
Sbjct: 521 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 580
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L+ P+V +++ + + G ++L L+ VY+ +
Sbjct: 581 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL--ELNSVVYNTLI 638
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RA + G EA K+ M++ G P TYS +I G+C GR EDA ++DEM + G +
Sbjct: 639 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 698
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ +T LI G+C ++D+ + +M + + V+I+G+ + A KL
Sbjct: 699 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 758
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
L EM+ K + P T+ L ++EE + M ++ P
Sbjct: 759 LHEMVGK-GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLP 803
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 167/384 (43%), Gaps = 42/384 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI-------SRQFQK 313
G N++T N I++ + + ++EEM G+ ++ + I SR
Sbjct: 381 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 440
Query: 314 FRMME----------------------------DAVKLFEFMMDGPYKPSVQDCSLLLRS 345
R + DAV+L+ +++ + ++ + L+
Sbjct: 441 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 500
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ N + R+ K G L K Y+ + K G+ +E K+ M G E
Sbjct: 501 LCKTGN--MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I G+C+ G+ ++A N+ +E + +P++ T+ ++I G+C A++++
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F +++ +N + ++ + + LI + A+KL +M K + P AT+ +LI +
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK-GIPPTTATYSSLIHGMC 677
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKE-YPSSA 581
R+E+A L+ M+K+ P + I K G ++ L+ +S + +P+
Sbjct: 678 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 737
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK 605
Y + + + G A LL++
Sbjct: 738 TYTVMIDGYSKSGDMKTAAKLLHE 761
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 114/501 (22%), Positives = 207/501 (41%), Gaps = 54/501 (10%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S + + + LSP +SV + +R+ + +P+ A FF + D FR + Y +++R+
Sbjct: 64 STQCKQLIPHLSPH-QFDSVFFSVRR-NVNPKTALNFFYFASDSCGFRFTLRSYCVLMRS 121
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK---ASDLAALNQFHDGMVK 195
L+ + + L R+ + L +L K + AS +A LN
Sbjct: 122 LIVSGFVSPARLLLIRLIDRK--------LPVLFGDPKNRHIEIASAMADLN-------- 165
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
E+ VA VD+++ + T + + A+G FR+
Sbjct: 166 EVGESGVAVAAVDLLI---------------------HVYCTQFRNVGFR--NAIGVFRF 202
Query: 256 VGEHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ + G T +L L + +E + +W V E ++G D+ + F K
Sbjct: 203 LA-NKGVFPTVKTCTFLLSSLVKANELEKSYW--VFETMRQGVSPDVYLFSTAINAFCKG 259
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+EDA++LF M P+V + L+ + N D FR K G + +
Sbjct: 260 GKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA--FRFKEKMVKDGVNATLI 317
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L KL +F+EA ++K GF P+ + Y+ +I G CK G DA + +M
Sbjct: 318 TYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDM 377
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G P+ T +IQG C ++++A +M+ + + + +I+ R
Sbjct: 378 VSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRF 437
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYPPF--PEP 551
A + L EM+ + +RP TL+ L + +A+ L RL++K
Sbjct: 438 ESALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNA 496
Query: 552 FVQYISKFGTVEDASEFLKAL 572
+ + K G +++A LK +
Sbjct: 497 LIHGLCKTGNMQEAVRLLKKM 517
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 3/290 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TYN ++ L +H ++ + + E+M K+G + TY + K
Sbjct: 273 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A + + ++ + P+ + L+ + N LG R+ S G + + +
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN--LGDALRIRGDMVSKGINPNSVTLN 390
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + K+G+ ++AE +++ M + GF + ++ +I LC RFE A L EM
Sbjct: 391 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 450
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P+ T L+ G C + A+ + +++EK + A+ + LI+G + A
Sbjct: 451 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 510
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+LL +M+E+ + + T+ TLI ++EE L M KQ P
Sbjct: 511 VRLLKKMLERGFVLD-KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 559
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 173/399 (43%), Gaps = 44/399 (11%)
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA-------------------------- 277
+ P AL FF + + G++ +Y ++R L
Sbjct: 90 VNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD 149
Query: 278 ---RHESVRDFWNVVEEMKKEGYEMD-IDTYIKI-SRQFQKFRMMEDAVKLFEFMMDGPY 332
RH + + E+ + G + +D I + QF+ +A+ +F F+ +
Sbjct: 150 PKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFRFLANKGV 208
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY--DGIHRALTKLGRFD 390
P+V+ C+ LL S+ N +L + V +E++ +S VY A K G+ +
Sbjct: 209 FPTVKTCTFLLSSLVKAN--ELEKSYWV---FETMRQGVSPDVYLFSTAINAFCKGGKVE 263
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A ++ M+ G P+ +TY+ +I GLCK G ++A ++M ++G + T+++LI
Sbjct: 264 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 323
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + + A + +EK + + + + LI+G+ + A ++ +M+ K +
Sbjct: 324 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSK-GI 382
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
P T ++I+ ++E+A +L M + + P F + ++ E A
Sbjct: 383 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 442
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
FL+ + ++ P+ + EG+H +A +L ++
Sbjct: 443 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR 481
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 146/349 (41%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N + YN ++ + ++ D + +M +G + T I + F K ME A
Sbjct: 346 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 405
Query: 321 VKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ E M+ + P + ++S L + + + + L ++ G
Sbjct: 406 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 465
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K G+ +A ++ + GF + +T + +I GLCK G ++A +L +M E G
Sbjct: 466 ----LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D T+ LI G C +V+ +M+++ + D ++LI+G +++ A
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQY 555
L E + L P T+ +I+ A ++EE L + QN ++
Sbjct: 582 NLWNECKSR-DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 640
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G +A + + K P++A Y + N GR +AK L+
Sbjct: 641 YCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 689
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 86/224 (38%), Gaps = 37/224 (16%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N++ YN ++R R+ + + + + ++M+ +G TY + MEDA L
Sbjct: 630 NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 689
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P+V Y +
Sbjct: 690 DEMRKEGLLPNV-------------------------------------VCYTALIGGYC 712
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KLG+ D+ +++ M + P+ ITY+ +I G K+G + A +L EM G +PD
Sbjct: 713 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 772
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
T+ +L G C +++ M ++ D L++G+
Sbjct: 773 TYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 142/316 (44%), Gaps = 15/316 (4%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY + R F ++ A++L E M ++ + + L++ + D G V
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLC-----DAGRVVEALE 65
Query: 363 KYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ ++ + V Y + AL K G+FDEA+ M++ M G PD +T+S +I GLCK
Sbjct: 66 HFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA-NEVDRALLCFAKMMEKNYDADAD 479
G E A VL+++ + G + +IQ C N V+ A ++ K +
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ +++INGF K ++ AYKLL MIEK + P TF LI L A R+ EA LL
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLEK 244
Query: 540 MKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRH 596
M P + + + K G V+DA E + + + P + + + +
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304
Query: 597 YEAKDLLYKCPHHIRQ 612
E LY H +R+
Sbjct: 305 IEEARQLY---HRMRE 317
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 126/525 (24%), Positives = 224/525 (42%), Gaps = 80/525 (15%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F ++ V++ +++ L + + + R M +D C + TY +++ L KA K +
Sbjct: 40 FEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDE-- 96
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
A + + + A D V TL+D + +++ + LED+
Sbjct: 97 AQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV----------------- 139
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
R +G +S TI I R+ ++ SV V+ + +G+ +
Sbjct: 140 --------IQRGMG-NSDAAFETI----IQRLCNKYNSVELASKVLGVVIAKGFTPTVLM 186
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + F K + ++ A KL E M++ P+V ++L+ + N +G ++ K
Sbjct: 187 FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANR--VGEAQQLLEK 244
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G S + Y + L K G+ D+A ++ + M+ P+ +T++ +I GLCKA R
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA-DADLLD 482
E+A + M E GC PDI T+ LI G C + +VD A F + E A +A
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L +G+ + R+ A ++ +++K P AT+ +LI + R E + L+ M
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDK-GFSPDLATYTSLILEYCKTSRAVEVVELVEEMAS 423
Query: 543 QNYPP----------------FPEPFVQY---ISKFGTVEDA-------------SEFLK 570
+ +PP E +Q ++ G +DA S+ K
Sbjct: 424 KGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNK 483
Query: 571 ALSVKEY----------PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
AL+V E PSS+A + ES GR +AK LL+K
Sbjct: 484 ALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHK 528
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 129/289 (44%), Gaps = 5/289 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G N +TY+ ++ L + V D + + + M++ ++ T+ + K + +E+
Sbjct: 248 GGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEE 307
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDG 378
A +L+ M + P + + L+ + D F++ G S + +V Y
Sbjct: 308 ARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE--AFQLFQTIPESGVSAANAVTYST 365
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ LGR +A ++ + + GF PD TY+ +I CK R + +++EM G
Sbjct: 366 LFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKG 425
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + T + ++ G N +RA+ F M + DA + ++++ G + N A
Sbjct: 426 FPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKAL 485
Query: 499 KLLVEMIEK--VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+L ++I+K + P + L+E L R ++A LL M ++ +
Sbjct: 486 AVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGF 534
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 109/239 (45%), Gaps = 7/239 (2%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+K Y + R + G D A ++++ MK+ GFE + + ++ ++ GLC AGR +A
Sbjct: 8 NKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHF 67
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M ++ C PD+ T+T L+ C A + D A +M+ + D LI+G
Sbjct: 68 RAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKF 126
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA-RRLEEAMNLLRLMKKQNYPPFPE 550
A+++L ++I++ + A F+T+I++L +E A +L ++ + + P
Sbjct: 127 GSEEQAFRVLEDVIQR-GMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 551 PFVQYISKFGTVEDASEFLKALSV----KEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F I+ F +D K L V P+ + + R EA+ LL K
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
Y + ++ + S+ + ++E + D + PS L+ S+ + D
Sbjct: 468 YNLVVEGMARASKHNKALAVLEQVID----KRDRKFNPSSSAVDALVESLCQVGRTDDAK 523
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ +K G + + S Y+G+ L++L R+DEA ++ +AM +AG P+ T + VI
Sbjct: 524 --QLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVIS 581
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LC A + +DA ++ M + GC PDI+T LI G+C + D A +M E +
Sbjct: 582 WLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEP 641
Query: 477 DADLLDVL 484
+ D+L
Sbjct: 642 NDTTHDLL 649
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + TY ++ + + +VEEM +G+ ++T + + E A
Sbjct: 390 GFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
++LF+ M +L++ ++ S +N L ++ +V +K + N S S D
Sbjct: 450 IQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNP-SSSAVDA 508
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ +L ++GR D+A++++ M GF +Y+ ++ GL + R+++A V + M G
Sbjct: 509 LVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAG 568
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+I T ++I C+A +VD A +M + D + + LI G+ R + A
Sbjct: 569 PAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLAR 628
Query: 499 KLLVEMIEKVRLRPWQATFKTL 520
KLL EM E L P T L
Sbjct: 629 KLLEEMTE-AGLEPNDTTHDLL 649
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 92/202 (45%), Gaps = 13/202 (6%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ TY +I G AG + A +L+EM+ NG + T L++G C A V AL
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F + M K+ D L++ + + A +L EMI + P TF TLI+ L
Sbjct: 67 F-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIAR-GCAPDTVTFSTLIDGLC 124
Query: 526 GARRLEEAMNLLRLMKKQ---NYPPFPEPFVQYI-SKFGTVEDASEFLKALSVKEY-PSS 580
E+A +L + ++ N E +Q + +K+ +VE AS+ L + K + P+
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184
Query: 581 AAYLQVFESFFNEGRHYEAKDL 602
+ V F +AKDL
Sbjct: 185 LMFNLVINGF------CKAKDL 200
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C+P+ T+ ILI+G +A ++D A+ +M ++ +A + L+ G RV
Sbjct: 5 CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV---- 60
Query: 499 KLLVEMIEKVR-----LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
VE +E R P T+ L+ L A + +EA +LR M + P F
Sbjct: 61 ---VEALEHFRAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFS 117
Query: 553 --VQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNE 593
+ + KFG+ E A L+ + + +S AA+ + + N+
Sbjct: 118 TLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNK 161
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 160/346 (46%), Gaps = 16/346 (4%)
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++NVA L + W + L ++ + VLK+L+ + V AL FF W+
Sbjct: 318 VENVAHILRQI----RWGPAAEEALANLNYSMDPYQANQVLKQLQDHTV-ALNFFYWLKR 372
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G+ H+ TY ++ +L R + ++++M K+G + ++ TY ++ + + +
Sbjct: 373 QPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLN 432
Query: 319 DAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
DAV +F M +P V C+L+ + + + L + + ++ G S Y
Sbjct: 433 DAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGF----LDFALEMYQRMQAAGLSPDTFTY 488
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K G A K+ M G P+ +TY+ +I KA ++ A + +M+
Sbjct: 489 SVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQS 548
Query: 437 NGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G PD T++I+++ GHC +D A F++M KN+ D + +L++ + V
Sbjct: 549 AGFQPDKVTYSIVMEVLGHCG--YLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNV 606
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
A++ M+ LRP T +L+ L +L +A NLL+ M
Sbjct: 607 EKAWQWYQTML-NTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSM 651
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A DA +V +EM+ GC PD
Sbjct: 390 LGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPD 449
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D AL + +M D V+IN + A+KL
Sbjct: 450 RVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFC 509
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+E+ + P T+ +I AR + A+ L R M+ + P
Sbjct: 510 EMVEQGCV-PNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQP 553
>gi|449437886|ref|XP_004136721.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
gi|449501176|ref|XP_004161299.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial-like [Cucumis sativus]
Length = 1037
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 180/408 (44%), Gaps = 14/408 (3%)
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+DW I K LE+ +E S V+ +L++ + A FF WVG+ GY H T TYN
Sbjct: 631 TDWK-LIKKALENCSVEFSPELVIEILRKCSLDGCAAFNFFAWVGKQPGYNHTTETYNMA 689
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+++ + + ++ EM++ G + T+ + Q+ + + E A+K +E M +
Sbjct: 690 IKIAGLGKDFKHMRSLFYEMRRRGCSITPYTWTIMIMQYARAGLTEIALKSYEEMKEINI 749
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
KP+ L+ S+ + + + K + + L KL R +A
Sbjct: 750 KPNANTYKYLIMSLCESKRRKVDEAITLFQEMIHSKYIPDKELLETYLGCLCKLSRLSDA 809
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILI 450
+K + ++ GF +TYS I LC+A + ++A +L+E+ +E + D + L+
Sbjct: 810 KKCIDHLRKVGFSIP-LTYSLYIRALCRARKLDEALTLLEEVVGDERSKL-DSYIYGSLV 867
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + AL M + + + I +K+ A ++L +M+++
Sbjct: 868 YGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTRRALEILAKMLQE-GC 926
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQYISKFGTVEDA 565
P AT+ ++ + ++ EA + MKK Y P P+ + + K G E+A
Sbjct: 927 EPSIATYSAIVHGYMNMGKVCEAWKVFNYMKK--YGPSPDFKAYTMLISCLCKAGRSEEA 984
Query: 566 SEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
E + L+ PSS + V EG+H A+D+L + IR+
Sbjct: 985 LEIISDMLNNGIAPSSINFRTVIFGLNREGKHVLARDVLQQKLGLIRR 1032
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 172/415 (41%), Gaps = 39/415 (9%)
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
+++E + +V + V+ G + + ++L ++ + S V VLK +P ALGF
Sbjct: 120 VLEENDVSSVVHEITAVIRGGNGLVSMEERLGNLDVMFSSEIVEKVLKRCFKFPHLALGF 179
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
F WV G++ T +N +L + + ++EEM+ DI T+ + +
Sbjct: 180 FNWVKSRDGFQCTTNVFNTVLSIAGEARDFKLIDKLLEEMESYSLLKDIKTWTILISLYG 239
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL---------------- 356
++ ++ ++ M + +P L+ S+S+ P+L +
Sbjct: 240 NAKLTGKSLMVYSKMKESGCEPDGVVYKTLICSLSAAGKPELAMEFYQEMAKKGISVVDM 299
Query: 357 ------------------VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
V +A +L N + VY I ++ R EA + ++
Sbjct: 300 KMCKMLLSSLAGSGDTASVLDIAKDMVALFNVQERDVYHYILKSFCISRRIKEALEFIRD 359
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
+ + G D+ + +I GLC+A R EDA +++ ++ G + D K + I+I + NE
Sbjct: 360 LNSKGIVLDSEYFEILIGGLCRANRIEDALELINIIKRKGDV-DGKIYGIIINWYLRKNE 418
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
V +AL F M E Y L+ S ++L EM+EK +
Sbjct: 419 VSKALDLFQNMKEMGYFPTTSTYTQLMQHLFSLAEYEKGFELYKEMLEK-GIELDTVAIM 477
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS 573
T++ + R+ EA N+ R M +N P + V +I + + E +K L+
Sbjct: 478 TVVVGNVRQNRITEAWNVFRTM--ENKPTWKSCSV-FIRELFRISRTDEIVKVLN 529
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 103/485 (21%), Positives = 187/485 (38%), Gaps = 94/485 (19%)
Query: 75 ACDWS---DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV 131
+ DW LEN E SP+L V+ +LRK D A FF WV + + ++
Sbjct: 630 STDWKLIKKALENCSVEFSPEL----VIEILRKCSLDGCAAFNFFAWVGKQPGYNHTTET 685
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD 191
Y++ ++ K M+ C I T+ + +++ A+ AL + +
Sbjct: 686 YNMAIKIAGLGKDFKHMRSLFYEMRRRGCSITPYTW--TIMIMQYARAGLTEIALKSYEE 743
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG 251
+KEI + A T +++ + +K+++ +T+ +E+
Sbjct: 744 --MKEINIKPNANTYKYLIMSLCESKR--RKVDE---------AITLFQEMI-------- 782
Query: 252 FFRWVGEHSGY---KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
HS Y K TY G L L+R + D ++ ++K G+ + + TY
Sbjct: 783 -------HSKYIPDKELLETYLGCLCKLSR---LSDAKKCIDHLRKVGFSIPL-TYSLYI 831
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R + R +++A+ L E E +G
Sbjct: 832 RALCRARKLDEALTLLE---------------------------------------EVVG 852
Query: 369 NSLSK---SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+ SK +Y + L + GR +EA M +MK G P Y+ I K +
Sbjct: 853 DERSKLDSYIYGSLVYGLLQTGRTEEALAKMNSMKQVGINPTVHVYTSFIVYSFKEKQTR 912
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +L +M + GC P I T++ ++ G+ +V A F M + D +LI
Sbjct: 913 RALEILAKMLQEGCEPSIATYSAIVHGYMNMGKVCEAWKVFNYMKKYGPSPDFKAYTMLI 972
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI-------EKLLGARRLEEAMNLLR 538
+ R A +++ +M+ + P F+T+I + +L L++ + L+R
Sbjct: 973 SCLCKAGRSEEALEIISDMLNN-GIAPSSINFRTVIFGLNREGKHVLARDVLQQKLGLIR 1031
Query: 539 LMKKQ 543
K Q
Sbjct: 1032 RRKFQ 1036
>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 164/382 (42%), Gaps = 44/382 (11%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK EL+ P AL FF W G+ Y HN Y + VLA + + +
Sbjct: 57 IKLSPNFVSFVLKSMELQKRPDLALKFFTWAGKQKKYTHNLQCYVSSIDVLAINGDLDNV 116
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+V + + G+ M++ + + F M+E+ + ++ M + +PS+ + LL
Sbjct: 117 KSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLL-- 174
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N L SV+ + AE++++ M+N
Sbjct: 175 -----------------------NGLVNSVF------------IESAERVLEVMENGKIG 199
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G C+ G+ + A +ME PD T+ LIQ A + D L
Sbjct: 200 PDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSL 259
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ +M E + ++I G + + Y + +MI+K + A + LI+
Sbjct: 260 YHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQK-GCKVNVAIYTALIDSNA 318
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAA 582
+ EAM L MKK+ P + V + K G +++A E+L+ V +A
Sbjct: 319 KCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGVAVNAM 378
Query: 583 -YLQVFESFFNEGRHYEAKDLL 603
Y + + GR +EA+ L
Sbjct: 379 LYSSLIDGLGKAGRVHEAEKLF 400
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y+ ++ L + + + V E+M ++G ++++ Y + K M +A+ LFE M
Sbjct: 274 AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERM 333
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+P V +++ + D + + + G +++ +Y + L K G
Sbjct: 334 KKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVN--GVAVNAMLYSSLIDGLGKAG 391
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R EAEK+ + M G PD+ Y+ +I L K G+ ++A ME+ GC + T+T
Sbjct: 392 RVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALAFFKRMEDEGCDQTVYTYT 451
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I+I G ++ + AL + M++K A L G +V A KLL E+
Sbjct: 452 IMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLCLSGKVARACKLLDEL-AP 510
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ + P + F+ ++ L A R++EA L
Sbjct: 511 MGVIP-ETAFEDMLNVLCKAGRIKEACKL 538
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 89/225 (39%), Gaps = 21/225 (9%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N + Y+ ++ L + V + + EEM K+G D Y + K ++
Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDE 430
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---------GNS 370
A+ F+ M D +V ++++ + FR E+L G +
Sbjct: 431 ALAFFKRMEDEGCDQTVYTYTIMINGL-----------FREHKNEEALKMWDMMIDKGIT 479
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ + + + L G+ A K++ + G P+ + ++ LCKAGR ++AC +
Sbjct: 480 PTAAAFRALSIGLCLSGKVARACKLLDELAPMGVIPET-AFEDMLNVLCKAGRIKEACKL 538
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
D + G + T+LI A D AL + YD
Sbjct: 539 ADGFVDRGREIPGRVRTVLINALRKAGNADLALKLMHSKIGIGYD 583
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 154/352 (43%), Gaps = 19/352 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +T T+ ++R L + + ++ ++M EG++ + TY + K A
Sbjct: 139 GHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAA 198
Query: 321 VKLFEFMMDGPYKPSVQ------DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
++L M+ +P+V DC R ++ N + ++ + G S + S
Sbjct: 199 IRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALN--------IFSEMIAKGISPNVS 250
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ I L K + +M M ++ P+ + ++ ++ LCK G A +V+D M
Sbjct: 251 TYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G PD+ T+T L+ GHC +E+D A F M+ K + LING+ +R+
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRI 370
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A L EM ++ L P T+ TLI L RL +A+ L M P +
Sbjct: 371 DKAMYLFEEMCQR-ELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ Y+ K ++ A LKA+ P +Y V + G A DL
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDL 481
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 183/450 (40%), Gaps = 81/450 (18%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y ++ L + + LR M + +C TY +I+ L K ++ ++
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNE-- 232
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWDDKIGKKLEDMKIELSDNFVLTVLK 240
ALN F + + K I+ NV+ T ++ G S+W K + + E+ D+
Sbjct: 233 ALNIFSEMIAKGIS-PNVS-TYNSIIHGLCKFSEW-----KHVATLMNEMVDS------- 278
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
+I P N + + ++ L + V +VV+ M + G E D
Sbjct: 279 --KIMP------------------NVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPD 318
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFR 359
+ TY + M++A K+F+ M+ P+V S L+ I D + +F
Sbjct: 319 VVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFE 378
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRF------------------------------ 389
+ E + N ++ Y+ + L +GR
Sbjct: 379 EMCQRELVPNIVT---YNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435
Query: 390 -----DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
D+A M+KA++ + PD +Y+ VI G+C+ G E A ++ + G PD+
Sbjct: 436 KTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVW 495
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+TI+I G C + A F +M D +++ GFL A +LL EM
Sbjct: 496 TYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEM 555
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ R A+ TLI ++L L++++
Sbjct: 556 LG--RGFSADASTITLIVEMLSDDGLDQSV 583
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 4/221 (1%)
Query: 328 MDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
MD PS V ++++ S +N D G F V K LG+ + + + R L
Sbjct: 100 MDSLGIPSDVYTLAIVINSFCHLNRVDFG--FSVLAKIFKLGHQPDTATFTTLIRGLCVE 157
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA + M GF+P+ +TY +I GLCK G A +L M + C P++ T+
Sbjct: 158 GKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITY 217
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I +V+ AL F++M+ K + + +I+G L+ EM++
Sbjct: 218 NTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVD 277
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ P F TL++ L + A +++ +M ++ P
Sbjct: 278 S-KIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEP 317
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 100/229 (43%), Gaps = 5/229 (2%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I ++ + + + K M + G D T + VI C R + +VL ++ + G
Sbjct: 80 ILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLG 139
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD T+T LI+G C ++ AL F KM+ + + + LI+G A
Sbjct: 140 HQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAI 199
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+LL M++K P T+ T+I+ L R++ EA+N+ M + P + +
Sbjct: 200 RLLRSMVQK-NCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHG 258
Query: 556 ISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ KF + + + + + K P+ + + ++ EG A D++
Sbjct: 259 LCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVV 307
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 7/345 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + ++G++ +RD K+ + + DT K+ K + +
Sbjct: 63 RSDXYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWG 122
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+E ++ Y S+ ++L+ ++ L V + G S ++ +
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFC--KEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNG 180
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K+G DE ++ M+ +G PD TYS +I GLCK + +DA + DEM +NG +P+
Sbjct: 181 YIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPN 240
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LI GHC VD A+ + +M+ ++ D + LI G + + A+ L+
Sbjct: 241 XVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLID 300
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
EM K L+P + T+ TLI+ LE A + M K+N + IS
Sbjct: 301 EMSMK-GLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQE 359
Query: 560 GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G DA + L+ LSV P Y + +G + LL
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLL 404
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G D+ TY + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+B P+ + L+ DL + ++R + L SL + Y+
Sbjct: 226 NELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYR-----QMLSQSLLPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN + V
Sbjct: 341 NIRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQ 408
Query: 436 ENGCIPDIKT 445
G +P++ T
Sbjct: 409 RXGYVPNVVT 418
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 168/364 (46%), Gaps = 19/364 (5%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F+ + Y+ T+ ++ A + V++ MK E + +I I + +
Sbjct: 76 IFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAY 135
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYESL-- 367
K + E AV LF+ M +C +S +S+ N + GL R Y +
Sbjct: 136 GKAHLPEKAVDLFDRM------ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIG 189
Query: 368 --GNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G S+S +V ++ + +A+ K+G D+A ++ + M EPD TY ++ GLCKA R
Sbjct: 190 AKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADR 249
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++LDEM+ +GC P T+ +LI G C ++ RA M K + +
Sbjct: 250 IDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNT 309
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI+G + ++ A LL M+ + P T+ T+I L+ R + +L LM+++
Sbjct: 310 LIHGLCLKGKLEKAISLLDRMVSS-KCVPNVVTYGTIINGLVKQGRALDGACVLALMEER 368
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEA 599
Y + IS K G ++A K ++VK Y ++ Y V + +G+ +A
Sbjct: 369 GYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDA 428
Query: 600 KDLL 603
++L
Sbjct: 429 VEVL 432
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 199/522 (38%), Gaps = 109/522 (20%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
++ DP + F +R + + ++ N N K L RMK + I E
Sbjct: 66 IEPDPPISDKIFKSGPKMGSYRLGDSTFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFE 125
Query: 165 ETYLSILGVLKKA---KKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK 221
+ ++ I KA +KA DL D++
Sbjct: 126 KCFIVIFKAYGKAHLPEKAVDLF--------------------------------DRMAC 153
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK--HNTITYNGILRVLARH 279
+ E + S N VL V+ + ++ +AL F+ V G N +T+N +++ + +
Sbjct: 154 EFECKRTGKSFNSVLNVIIQEGLFH-RALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKV 212
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL---------------F 324
V D V +M E D+ TY + K +++AV L F
Sbjct: 213 GLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTF 272
Query: 325 EFMMDGPYKPS-------------VQDC------------------------SLLLRSIS 347
+++G K ++ C SLL R +S
Sbjct: 273 NVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVS 332
Query: 348 SINNPDL--------GLVFR--------VANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
S P++ GLV + V E G +++ VY + L K G+ E
Sbjct: 333 SKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQE 392
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + K M G+E + I YS VI GLC+ G+ +DA VL EM GC P+ T + L++
Sbjct: 393 AMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMK 452
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G A RA+ + M + N+ + VLI+G +V A + +M+ K +
Sbjct: 453 GFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGK-GCK 511
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
P + ++I L A +E+AM L M Q P +P V
Sbjct: 512 PDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQG--PDSQPDV 551
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 105/461 (22%), Positives = 185/461 (40%), Gaps = 75/461 (16%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKAS 181
++ P Y ++ L D + + L M+ D C+ T+ + I G+ KK
Sbjct: 228 RKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKG---- 283
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
DL+ + D M + + N T ++ G K+ K + + +S V V+
Sbjct: 284 DLSRAAKLVDNMFLKGCIPNEV-TYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTY 342
Query: 242 LRIY-----PVKAL--GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
I +AL + E GY N Y+ ++ L + ++ ++ +EM
Sbjct: 343 GTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTV 402
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+GYE++ Y + + +DAV++ M + P+ CS L++ N
Sbjct: 403 KGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHR 462
Query: 355 GL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+ V++ K+ N + SV IH L K G+ EA + M G +PD + YS
Sbjct: 463 AVEVWKDMAKHNFTQNEVCYSVL--IH-GLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSS 519
Query: 414 VIFGLCKAGRFEDA----------------------------C---------NVLDEMEE 436
+I GL AG EDA C ++L+ M +
Sbjct: 520 MINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLD 579
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD---LLDVLINGFLSQKR 493
GC PD+ T TI F +M+ + D D LD L+ L ++R
Sbjct: 580 RGCDPDLVTCTI-----------------FLRMLREKLDPPQDGREFLDELVVRLLKRQR 622
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
V GA K++ M++K+ L P +T+ ++E L ++++ +
Sbjct: 623 VLGASKIVEVMLQKL-LPPKHSTWARVVENLCKPKKVQAVI 662
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 168/363 (46%), Gaps = 16/363 (4%)
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
++NV++ L + W + L ++ + VLK+++ +PV ALGFF W+
Sbjct: 326 VENVSRILRQL----SWGPAAEEALRNLNCLMDAYQANQVLKQIQDHPV-ALGFFYWLKR 380
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G+KH+ TY ++ +L R ++ EM ++G + ++ TY ++ + + +
Sbjct: 381 QTGFKHDGHTYTTMVGILGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLN 440
Query: 319 DAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+AV +F+ M + +P V C+L+ + + + L + + K + S Y
Sbjct: 441 EAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGF----LDVALHMYQKMQEAHLSPDTFTY 496
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K G A K+ M + G P+ +TY+ +I KA + A + +M+
Sbjct: 497 SVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQN 556
Query: 437 NGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G PD T++I+++ GHC E A+ F +M KN+ D + +L++ + V
Sbjct: 557 AGFQPDKVTYSIVMEVLGHCGHLEEAEAI--FTEMKRKNWVPDEPVYGLLVDLWGKVGNV 614
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+++ M+ L P T +L+ L RL +A NLL+ M + P + +
Sbjct: 615 EKSWEWYQAML-NAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTL 673
Query: 555 YIS 557
+S
Sbjct: 674 LLS 676
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 109/260 (41%), Gaps = 43/260 (16%)
Query: 386 LGR---FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
LGR F K++ M G +P+ +TY+++I +A +A +V D M+E GC PD
Sbjct: 398 LGRARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPD 457
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D AL + KM E + D V+IN + A+KL
Sbjct: 458 RVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFC 517
Query: 503 EMIEK----------------------------------VRLRPWQATFKTLIEKLLGAR 528
EM+++ +P + T+ ++E L
Sbjct: 518 EMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCG 577
Query: 529 RLEEAMNLLRLMKKQNYPPFPEP----FVQYISKFGTVEDASEFLKA-LSVKEYPSSAAY 583
LEEA + MK++N+ P EP V K G VE + E+ +A L+ P+
Sbjct: 578 HLEEAEAIFTEMKRKNWVP-DEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTC 636
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ +F R +A +LL
Sbjct: 637 NSLLSAFLRVHRLSDAYNLL 656
Score = 45.4 bits (106), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 43/227 (18%), Positives = 102/227 (44%), Gaps = 11/227 (4%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P+ Y+ ++ + + L + RM+E C + TY +++ + KA A
Sbjct: 420 QPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLD--VA 477
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLTV 238
L+ + ++ D +++ LG KL ++ ++ N ++ +
Sbjct: 478 LHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIAL 537
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+ R YP AL +R + +++G++ + +TY+ ++ VL + + + EMK++ +
Sbjct: 538 QAKARNYPT-ALELYRDM-QNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWV 595
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
D Y + + K +E + + ++ M++ P+V C+ LL +
Sbjct: 596 PDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLSA 642
>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
Length = 696
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 186/431 (43%), Gaps = 27/431 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLV-NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
K R + ++ +LR L K + + LRRM E C + +Y ++L L KK
Sbjct: 172 KTGLRAQAVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKC 231
Query: 181 SDLAALNQF--HDGMVKEIAMDNVAKTLVD---VVLGSDWDDKIGK------KLEDMKIE 229
+ A L DG DN +V V+ G + +GK K+ D I
Sbjct: 232 EEAAELIHMMAEDG-------DNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIP 284
Query: 230 ---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
++ N V+ L +++ + + EH N TYN ++ +
Sbjct: 285 PNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEH--IMPNCTTYNSLIHGYLSSGQWTEAV 342
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+++EM ++G ++ TY + K + +A ++F M+ KP+ LL
Sbjct: 343 RILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGY 402
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
++ N L + V + G + V++ A K GR DEA M+ GF P
Sbjct: 403 ATEGN--LVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMP 460
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D + Y+ VI GLCK GR +DA + +M ++G PDI T+ LI G + ++A F
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELF 520
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+MM++ + + + +I+ + +V A KL +++ + +P ++ T+I
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLF-DLMPRAGAKPNVVSYNTMIHGYFI 579
Query: 527 ARRLEEAMNLL 537
A + E M LL
Sbjct: 580 AGEVGEVMKLL 590
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ ILI C A ++ ++++ A A L+ ++KR + A +
Sbjct: 142 PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMNI 201
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK--QNYPPFPEPFVQYISK 558
++ + ++ P ++ TL++ L ++ EEA L+ +M + N PP + I
Sbjct: 202 VLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHG 261
Query: 559 F 559
F
Sbjct: 262 F 262
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 86/210 (40%), Gaps = 29/210 (13%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M+++G+ DI Y + K ++DA+ F M+D P + + L+ +
Sbjct: 452 KMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFA--- 508
Query: 351 NPDLGLVFRVANK--YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
L + A + YE + + +V ++ + L K G+ EA K+ M AG +P
Sbjct: 509 ---LHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKP 565
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEM-------------------EENGCIPDIKTWT 447
+ ++Y+ +I G AG + +LD+M G PD+ T
Sbjct: 566 NVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCK 625
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LI C ++ L F +M+ K D
Sbjct: 626 TLIDSCCEDGRIEDILTLFREMLGKADKTD 655
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 80/203 (39%), Gaps = 25/203 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + IT+N ++ A H + EM G +++T+ + + K + +A
Sbjct: 492 GLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEA 551
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ M KP+V + ++ ++G V ++ + +G + ++
Sbjct: 552 RKLFDLMPRAGAKPNVVSYNTMIHGYFIAG--EVGEVMKLLDDMLLIGLKPTAVTFN--- 606
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
++ M + G +PD +T +I C+ GR ED + EM
Sbjct: 607 -------------TLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADK 653
Query: 441 PDIKTWTILIQG-------HCAA 456
D T I ++G HC++
Sbjct: 654 TDTITENIKLRGVTVKASYHCSS 676
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 155/330 (46%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 309 WGHAAEEALHNFGFRMDAYQANQVLKQMDNY-ANALGFFYWLKRQPGFKHDGHTYTTMVG 367
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + + +++EM ++G + + TY ++ + + +++A+ +F M + +P
Sbjct: 368 NLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEP 427
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + + G S Y I L K G A
Sbjct: 428 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
++ M G P+ +T++ +I KA +E A + +M+ G PD T++I+++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC ++ A FA+M KN+ D + +L++ + V+ A++ M++ L
Sbjct: 544 LGHCGF--LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ-AGL 600
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L R+ EA NLL+ M
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 15/249 (6%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
++ I R+F+ E+A+ F F MD + +L+ + + N LG + +
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMD------AYQANQVLKQMDNYANA-LGFFYWL 349
Query: 361 ANK--YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ ++ G++ + V + L + +F E K++ M G +P+ +TY+++I
Sbjct: 350 KRQPGFKHDGHTYTTMVGN-----LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY 404
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+A ++A NV ++M+E GC PD T+ LI H A +D A+ + +M E D
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
V+IN + A++L EM+ + P TF +I AR E A+ L R
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 539 LMKKQNYPP 547
M+ + P
Sbjct: 524 DMQNAGFQP 532
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 37 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAXECYRLTREHKFWVPFDTCRKV 96
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ D+ + V N
Sbjct: 97 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KEGDIMVAQSVFNAITKW 154
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 214
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 215 NEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYG 274
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ LE A + M ++
Sbjct: 275 LCKKGDLKQAHDLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRL 333
Query: 548 FPEPFVQYISKFGTVE---DASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS E DA + L+ LSV P + Y + F +G + LL
Sbjct: 334 DDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLL 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 155 GLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++F+ M+D P+ + L+ DL + +SL L Y+ +
Sbjct: 215 NEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLI--TYNTLI 272
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 273 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIR 332
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 333 LDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKL 392
Query: 501 LVEM 504
L EM
Sbjct: 393 LKEM 396
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 37/171 (21%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT------------------ 305
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 306 --LIDGCCKEG-----------------DLETAFEHRKRMIQEXIRLDDVAYTALISGLC 346
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ R+ +AEK+++ M + G +PD TY+ +I CK G +L EM+
Sbjct: 347 QEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Glycine max]
Length = 892
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 151/356 (42%), Gaps = 58/356 (16%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE---------- 295
P+ AL FFRW+ H + H+ T++ +L +L RH ++R NV M K
Sbjct: 66 PLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATFL 125
Query: 296 --------------------GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
+++ + +Y ++ +F M+++ + L++ M+
Sbjct: 126 LNLLRRMNTAAAAADHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSV 185
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGN-SLSKSVYDGIHRALTKLGRFDEAEK 394
P+L + + N Y LGN ++++ + I R F
Sbjct: 186 F---------------PNLITLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSL 230
Query: 395 MMKAMKNAGFEP-----------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
++ +N E + ++Y+ +I GLC+AG+ +A M E+GC P +
Sbjct: 231 VLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEALEFWARMREDGCFPTV 290
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T+T+L+ C + AL F +M E+ + + VLI+ + R++ A K+L E
Sbjct: 291 RTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNE 350
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
M+EK + P F LI +E+A+ +L LM+ + P + + I F
Sbjct: 351 MVEK-GVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGF 405
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 151/326 (46%), Gaps = 7/326 (2%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
++AL F + E G + N TY ++ L + + + ++ EM ++G + +
Sbjct: 307 LEALSLFGEMRER-GCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNA 365
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K MMEDAV + M P+V+ + L+ + D + + NK
Sbjct: 366 LIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMA--LLNKMVE 423
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
S Y+ + L ++G D A ++ + M GF PD T++ + LC+ GR +
Sbjct: 424 SKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGE 483
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L+ ++E + +T LI G+C A +++ A F +M+ + ++ +V+I+
Sbjct: 484 AHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMID 543
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + +V A LLVE + K ++P T+ L+E++L + A +L + Y
Sbjct: 544 GLRKEGKVQDAM-LLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQ 602
Query: 547 PFPEPFVQYISKF---GTVEDASEFL 569
P + +I + G +E+A E +
Sbjct: 603 PNVVTYTAFIKAYCSQGRLEEAEEMV 628
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 135/560 (24%), Positives = 226/560 (40%), Gaps = 95/560 (16%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPS-STVYSLML-----RNL 139
L+ L P LT S++ L L+ DP A FF W+ F S +T +SL+L R L
Sbjct: 44 LKTLIPSLT-PSLLCSLFNLNPDPLTALNFFRWIRRHHNFPHSLATHHSLLLLLVRHRTL 102
Query: 140 VNKDSLKQFWVT--------------LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
++++ + LRRM + + L+ L + L
Sbjct: 103 RAAENVRNSMIKSCTSPHDATFLLNLLRRMNTAAAAADHQHQLAFKLSLTSYNRL--LMC 160
Query: 186 LNQFH--DGMV---KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L++F D M+ KE+ DN +++ + + K L +M + + F + +L+
Sbjct: 161 LSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCK-LGNMAV--ARLFFVRILR 217
Query: 241 -----ELRIYPVKALGFFRW--VGEHSGY-----KHNTITYNGILRVLAR----HESVRD 284
+L Y LG+ R V G + N ++Y ++ L HE++ +
Sbjct: 218 CEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSYTNLIHGLCEAGKLHEAL-E 276
Query: 285 FWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
FW M+++G + TY + + + R +E A+ LF M + +P+V ++L+
Sbjct: 277 FW---ARMREDGCFPTVRTYTVLVCALCESGRELE-ALSLFGEMRERGCEPNVYTYTVLI 332
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
L K GR DEA KM+ M G
Sbjct: 333 D-------------------------------------YLCKEGRMDEALKMLNEMVEKG 355
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P + ++ +I CK G EDA VL ME P+++T+ LI G C +DRA+
Sbjct: 356 VAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAM 415
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
KM+E D + LI+G V+ A +L MI P Q TF +
Sbjct: 416 ALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRD-GFSPDQWTFNAFMVC 474
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKE-YPS 579
L R+ EA +L +K+++ + I K G +E A+ K + +E P+
Sbjct: 475 LCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPN 534
Query: 580 SAAYLQVFESFFNEGRHYEA 599
S + + + EG+ +A
Sbjct: 535 SITFNVMIDGLRKEGKVQDA 554
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/474 (21%), Positives = 189/474 (39%), Gaps = 62/474 (13%)
Query: 104 KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD--SLKQFWVTLRRM------ 155
KL D + + +C+ +S ++ LM+R+ + D + F V L RM
Sbjct: 425 KLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEA 484
Query: 156 -------KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLV 207
KE H E Y +++ KA K A+L F + +E +++ ++
Sbjct: 485 HQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASL--FKRMLAEECLPNSITFNVMI 542
Query: 208 DVVLGSDWDDKIGKKL---EDM-------KIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
D G + K+ + EDM + + V VLKE + R +
Sbjct: 543 D---GLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEI-LNRLIS 598
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
SGY+ N +TY ++ + + +V ++K EG +D Y + + ++
Sbjct: 599 --SGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLL 656
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSIS---------------------SINNPDL-- 354
+ A + M +PS S+L++ + S++N D+
Sbjct: 657 DSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWS 716
Query: 355 ----GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ + K G + + Y + L K+GR + A + M+ G P I
Sbjct: 717 KIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSLYHHMREGGISPSEII 776
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
++ ++ CK G F +A +LD M E + ++++ +LI G ++A F ++
Sbjct: 777 HNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFEQMNKEKAEAVFCSLL 836
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
Y+ D VLI+G V+ +LL ++EK R T+ L+++L
Sbjct: 837 RCGYNYDEVAWKVLIDGLAKTGYVDQCSELL-NLMEKNGCRLHPETYSMLMQEL 889
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 117/493 (23%), Positives = 213/493 (43%), Gaps = 30/493 (6%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS-ILGVLKKAKKASDLA 184
+PS ++ M+ L K +++ + ++ + + TY S ILG + K L
Sbjct: 194 KPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRK----LD 249
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
+ D MVK+ N + T ++ G + +IG+ + DM E+++ + + +
Sbjct: 250 KAFEVFDRMVKDGCNPN-SVTYSTLINGLCNEGRIGEAM-DMLEEMTEKGIEPTVYTYTV 307
Query: 245 YPVK----------ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
P+ A+ R +G+ G + TY I+ L R + + +M K
Sbjct: 308 -PISSLCDIGRVDDAINLVRSMGK-KGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLK 365
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG + TY + + A+K+F++M + Q + +++ + +++ +
Sbjct: 366 EGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEK 425
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+V V NK G S + Y+ + K G + A + + MK + EPD TY ++
Sbjct: 426 AMV--VFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCEL 483
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I G CK G+ + A + EM + G P+ T+T +I G+C ++D AL F +M E
Sbjct: 484 ISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGC 543
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
A + + +I+G R + A K +M E+ L+P T+ +LI L A
Sbjct: 544 SASIETYNAIISGLSKGNRFSEAEKFCAKMTEQ-GLQPNTITYTSLINGLCKNTATNLAF 602
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKFGTVE----DASEFLKALSVKEYPSSAAYLQVFESF 590
+ M+K+N P + I +G + DA+E L + P+ Y +
Sbjct: 603 KIFHEMEKKNCLPNAHTYTSLI--YGLCQEGKVDAAERLTENGCE--PTIDTYSTLVSGL 658
Query: 591 FNEGRHYEAKDLL 603
EGR EA L+
Sbjct: 659 CREGRSNEASQLV 671
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 113/220 (51%), Gaps = 8/220 (3%)
Query: 383 LTKLGRFD---EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L +LG+FD A+ + + ++G +P +T++ +I LCK G+ ++A V +++ +
Sbjct: 169 LLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDL 228
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+T LI GHC ++D+A F +M++ + ++ LING ++ R+ A
Sbjct: 229 CPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMD 288
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS-- 557
+L EM EK + P T+ I L R+++A+NL+R M K+ P + + IS
Sbjct: 289 MLEEMTEK-GIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347
Query: 558 -KFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
+ G +E A + K L P++ Y + EGR
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGR 387
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 123/290 (42%), Gaps = 13/290 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TY ++ + + ++ E M++ G I+TY I K +A
Sbjct: 507 GISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEA 566
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K M + +P+ + L+ + N L F++ ++ E + Y +
Sbjct: 567 EKFCAKMTEQGLQPNTITYTSLINGLCK--NTATNLAFKIFHEMEKKNCLPNAHTYTSLI 624
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + G+ D AE++ + G EP TYS ++ GLC+ GR +A +++ M+E G
Sbjct: 625 YGLCQEGKVDAAERLTEN----GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLS 680
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P ++ + L+ HC + +VD AL F M K + + VLI R A +
Sbjct: 681 PSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNI 740
Query: 501 LVEMIEKVRLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++K W + + L++ LL + M L LM+ +N P
Sbjct: 741 FQSLLKK----QWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTP 786
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 123/308 (39%), Gaps = 33/308 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGIL------RVLARHESVRDFWNVVEEMKKEGYEMDID 302
AL FF W+ + YKH+ + +L ++LA + VR
Sbjct: 87 ALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILM---------------- 130
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
IK R + + + D + G + ++ + LL + + +V N
Sbjct: 131 --IKACRNEDELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFD-----MVTSAQN 183
Query: 363 KYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
Y + +S K ++ + L K G+ EA + + PD TY+ +I G C
Sbjct: 184 VYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHC 243
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ + + A V D M ++GC P+ T++ LI G C + A+ +M EK +
Sbjct: 244 RNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVY 303
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
V I+ RV+ A L+ M +K P T+ +I L A ++E A+ +
Sbjct: 304 TYTVPISSLCDIGRVDDAINLVRSMGKK-GCSPSVQTYTAIISGLFRAGKMELAIGMYHK 362
Query: 540 MKKQNYPP 547
M K+ P
Sbjct: 363 MLKEGLVP 370
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY H+ ++ ++ L + +++ MK E + D + I R + + D
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++++F M D PS + +L + N L L F+ +G + + + +
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ--LNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 380 HRALTKL-GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL + G D K+ M G +PD+ TY +I GLC+ GR ++A + EM E
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+T LI G C + VD A+ +M K + + L++G R A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L EM+ RP T+ TLI L ++++EA+ LL M Q P + + IS
Sbjct: 283 ELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 559 FGTV---EDASEFL 569
F + +A+ FL
Sbjct: 342 FCAISKFREAANFL 355
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 196/491 (39%), Gaps = 78/491 (15%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQ 147
S +T V+ ++R + D EK+ A F+ + + + + M+ LV+ + K
Sbjct: 11 SKNITPSQVIKLMRA-EKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
+ RMK ++C + E+ LSI + + D +L FH +K+ D K V
Sbjct: 70 AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD--SLRVFHK--MKDFDCDPSQKAYV 125
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
V + +E+ ++ L+ F ++E+ + P A
Sbjct: 126 TV---------LAILVEENQLNLAFKFYKN-MREIGLPPTVA------------------ 157
Query: 268 TYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+ N +++ L R++ D + EM K G + D TY + +F +++A KLF
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----------YESLGNSLSKS-- 374
M++ P+V + L+ + N D + + K Y SL + L K
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 375 ---------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
Y + L K + EA +++ M G +PD Y +
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI-------LIQGHCAANEVDRALLCF 466
VI G C +F +A N LDEM G P+ TW I +++G C AN RA +
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLY 396
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M + + + L+ L+ + A +L+ E++ + P + T+K LI L
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI-PSKGTWKLLIGHTLD 455
Query: 527 ARRLEEAMNLL 537
+ EA + L
Sbjct: 456 KTIVGEASDTL 466
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 16/230 (6%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ-VIFGLCKA-GRFE---DACNVLDEMEEN 437
L +F AE ++ MK +N S+ ++ +C+ GR D+ V +M++
Sbjct: 61 LVSANKFKAAEDLIVRMK-----IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL-SQKRVNG 496
C P K + ++ N+++ A + M E L+VLI + V+
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
K+ +EM K P T+ TLI L R++EA L M +++ P + I
Sbjct: 176 GLKIFLEM-PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 557 SKFG---TVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ V++A +L+ + K P+ Y + + +GR +A +L
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + + LL +++ +N +L V + + ++LG S Y
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL--VISLGEQMQTLGISHDLYTY 121
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A ++ M G+EPD +T S ++ G C + R DA ++D+M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A LL +M E R++ F T+I+ L R +E A++L M+ + P + +
Sbjct: 242 ALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 554 QYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ +G DAS L L K P+ + + ++FF EG+ EA+ L
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 7/338 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G H+ TY+ + R + V+ +M K GYE DI T + + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M++ YKP + L+ + N + + ++ G Y +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA--LVDQMVQRGCQPDLVTYGTVV 230
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G D A ++ M+ A + + + ++ +I LCK E A ++ EME G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI C A + M+EK + + + LI+ F + ++ A KL
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EMI++ + P T+ LI RL+EA + + M ++ P + + I+ F
Sbjct: 351 HEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 561 T---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
VED E + +S + ++ Y + + FF G
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 20/354 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + + N++ +M+ + ++ + I K+R +E A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
V LF M +P+V + L+ + + R ++ L N L K +
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYG--------RWSDASRLLSNMLEKKINPNVV 329
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + A K G+ EAEK+ + M +PD ITY+ +I G C R ++A + M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C+P+I+T+ LI G C V+ + F +M ++ + +I GF
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
+ A + +M+ R+ T+ L+ L +L+ A+ + + ++K
Sbjct: 450 DSAQMVFKQMVSN-RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 552 FVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G V +A + +LS+K P Y + ++ EA DL K
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK--PDVVTYNTMISGLCSKRLLQEADDLFRK 560
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 15/344 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TYN ++ L + D ++ M ++ ++ T+ + F K +
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVY 376
+A KL E M+ P +LL+ N D +F+ + L N Y
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI---QTY 401
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K R ++ ++ + M G + +TY+ +I G +AG + A V +M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N DI T++IL+ G C+ ++D AL+ F + + + + + + +I G +V
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A+ L + ++P T+ T+I L R L+EA +L R MK+ P + I
Sbjct: 522 AWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 557 SKFGTVED-----ASEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
+ D ++E +K + + A+ + + + ++GR
Sbjct: 578 R--ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L+ + + D+A + M + P + +++++ + K +FE ++ ++M+ G D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T++I I C +++ AL AKMM+ Y+ D L L+NG+ KR++ A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
+M+E + +P TF TLI L + EA+ L+ M ++ P + V + K
Sbjct: 178 QMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 560 GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE-AKDL 602
G ++ A L + ++ + RH E A DL
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 158/346 (45%), Gaps = 13/346 (3%)
Query: 206 LVDVVLGSDWDDKIGKKLEDM---KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+ V +GS D+ L+D I+LS + V +L+ + ALG FRW SG+
Sbjct: 44 IAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGF 103
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
KH Y+ ++ L + + + ++EEMK E + +DT K R+F E+AV+
Sbjct: 104 KHTPDLYDILIDTLGKTKQLVKMRGMLEEMK-EARLVTLDTVAKAMRRFAGAGQWENAVR 162
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS--KSVYDGIH 380
+F+ + + + + ++LL ++ V + Y L + ++ + ++
Sbjct: 163 IFDDLETYGLEKNTESMNVLLDTLCKEKK-----VEKARQMYLELKSHIAPNANTFNMFI 217
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+ + DEA ++ MK G P I+YS +I C F +LDEM+ GC
Sbjct: 218 HGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCP 277
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ T+T ++ + E + AL +M Y+ D + LI+ +V A +
Sbjct: 278 ANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHV 337
Query: 501 L-VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
VEM K L P +T+ ++I R E+AM LL M+K +
Sbjct: 338 FEVEMPSKSVL-PNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEH 382
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 96/428 (22%), Positives = 190/428 (44%), Gaps = 38/428 (8%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW 149
S +L+H+ V +L++ +D + A F W F+ + +Y +++ L L +
Sbjct: 68 SIQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMR 127
Query: 150 VTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM-----VKEIAMDNVAK 204
L MKE L L + KA + A Q+ + + ++ ++ +
Sbjct: 128 GMLEEMKE--------ARLVTLDTVAKAMRR--FAGAGQWENAVRIFDDLETYGLEKNTE 177
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIEL-------SDNFVLTVLKELRIYPVKALGFFRW-V 256
++ +V+L + +K +K M +EL ++ F + + ++ + W +
Sbjct: 178 SM-NVLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEA---HWTL 233
Query: 257 GEHSGYKHN--TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
E GY H I+Y+ I+ + + +++EM +G ++ TY I K
Sbjct: 234 EEMKGYGHRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKS 293
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES-LGNSLS 372
E+A+++ E M Y+P + L+ ++ + VF V +S L N+
Sbjct: 294 EEFEEALQIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNT-- 351
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFE-DACNV 430
S Y+ + + R ++A K+++ M K+ +PD TY ++ + G+ + D N+
Sbjct: 352 -STYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNL 410
Query: 431 LDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
LDEM ++ DI T+++LI G C AN+ D A F KM+ ++ +L++ F
Sbjct: 411 LDEMINKHHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEF- 469
Query: 490 SQKRVNGA 497
QK ++G
Sbjct: 470 KQKNMDGV 477
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 95/229 (41%), Gaps = 9/229 (3%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R G+++ A ++ ++ G E + + + ++ LCK + E A + E++ +
Sbjct: 149 RRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTLCKEKKVEKARQMYLELKSH-IA 207
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+ + I G C N++D A +M + +I + + N Y+L
Sbjct: 208 PNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYEL 267
Query: 501 LVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
L EM + P T+ T++ L + EEA+ + MK Y P F + +
Sbjct: 268 LDEM--DAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTL 325
Query: 557 SKFGTVEDASEFLKA--LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G V +A + S P+++ Y + + R +A LL
Sbjct: 326 GRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLL 374
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 181/432 (41%), Gaps = 48/432 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + LE + + + V V+K VK + FFRW + Y+H+T TY ++
Sbjct: 73 WGPDAERALEVLMLRVDHWLVREVMKTDVGVNVK-MQFFRWAAKKRNYQHDTSTYMALIH 131
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS---RQFQKFRMMEDAVKLFEFMMDGP 331
L E + W +++EM + + + T +++S R +M+ A+ +F +
Sbjct: 132 CLELVEQYGEMWKMIQEMVRS--PICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARK 189
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD 390
+P+ Q + ++ I I+ V + N+ + G+ +V Y + A KLGR D
Sbjct: 190 CQPTAQAYNSMI--IMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKLGRQD 247
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A +++ MK G +P Y+ +I K A ++ +EM C PD+ T+T LI
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELI 307
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM------ 504
+G A +D A + +M ++ D +++ +IN R++ KL EM
Sbjct: 308 RGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCI 367
Query: 505 --------------------------IEKVR---LRPWQATFKTLIEKLLGARRLEEAMN 535
E+++ + P T+ LI+ R+E+AM
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM 427
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEYPSSA-AYLQVFESFF 591
LL M ++ +PP P + I G + A E + L SSA Y + +
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 592 NEGRHYEAKDLL 603
GR +A +L
Sbjct: 488 KAGRLDDAINLF 499
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 112/476 (23%), Positives = 200/476 (42%), Gaps = 38/476 (7%)
Query: 101 VLRKLDNDP--EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRM-KE 157
V+R L N KA F + ++ +P++ Y+ M+ L+++ ++ M E
Sbjct: 165 VIRMLGNAKMIGKAITIFYQI-KARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNE 223
Query: 158 DHCYIEEETYLSILGVLKK-AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDW 215
HC+ + TY +++ K ++ S + LN+ +KE M AK ++ L
Sbjct: 224 GHCHPDTVTYSALISAFCKLGRQDSAIRLLNE-----MKENGMQPTAKIYTMIISLFFKL 278
Query: 216 DDKIG--KKLEDMKIELS--DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH------- 264
D+ G E+M+ D F T L ++ LG + E + H
Sbjct: 279 DNVHGALSLFEEMRYMYCRPDVFTYTEL-------IRGLGKAGRIDEAYHFYHEMQREDC 331
Query: 265 --NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ-FQKFRMMEDAV 321
+T+ N ++ L + + D + EEM ++ TY I + F+ + +
Sbjct: 332 KPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVF 391
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
FE M PS S+L+ N + ++ + + + G + Y +
Sbjct: 392 SWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM--LLEEMDEKGFPPCPAAYCSLID 449
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
AL K R+D A ++ + +K Y+ +I L KAGR +DA N+ DEM + GC P
Sbjct: 450 ALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTP 509
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ + L+ G A +D AL KM E D + ++++NG + A ++L
Sbjct: 510 NVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEML 569
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
M + ++P ++ T++ L A EEA LMK+ N F + Y S
Sbjct: 570 TNM-KNSTIKPDAVSYNTVLSALSHAGMFEEAA---ELMKEMNALGFEYDLITYSS 621
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 156/379 (41%), Gaps = 50/379 (13%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+P++ +Y++++ D++ M+ +C + TY ++ L KA + +
Sbjct: 261 MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDE-- 318
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLG--SDWDDKIGKKLEDMKIELSDNFVLT---VL 239
A + +H+ ++ D V + LG DD + K E+M + V+T ++
Sbjct: 319 AYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGL-KLFEEMGVSHCIPNVVTYNTII 377
Query: 240 KELRIYPVKALGFFRWVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG- 296
K L + F W + SG + TY+ ++ + + ++EEM ++G
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 297 ------YEMDIDTYIKISRQ------FQKFR----------------------MMEDAVK 322
Y ID K R FQ+ + ++DA+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
LF+ M P+V + L+ ++ D L K + G + Y+ I
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT--TMRKMQEHGCLPDINSYNIILNG 555
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K G A +M+ MKN+ +PD ++Y+ V+ L AG FE+A ++ EM G D
Sbjct: 556 LAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYD 615
Query: 443 IKTWTILIQGHCAANEVDR 461
+ T++ +++ A +VD+
Sbjct: 616 LITYSSILE---AIGKVDQ 631
>gi|356574085|ref|XP_003555182.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Glycine max]
Length = 733
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 115/466 (24%), Positives = 188/466 (40%), Gaps = 56/466 (12%)
Query: 197 IAMDNVAKTLVDVVLGSD--WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
+ + +A+ +VD +D W + +L ++ ++ N V VLK ++ A FF
Sbjct: 95 LRLSPIARFIVDAFRRNDNKWCPNVAAELSKLR-RITPNLVAEVLK-VQTNHTLASKFFH 152
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-------YEM------DI 301
W G GY HN +YN + L RH R + E M+ +G +E+ D
Sbjct: 153 WAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEILIRMHSDA 212
Query: 302 DTYIKISRQFQKFR---MMEDAVKLFEFMMDGPYKPSVQDCSLL----LRSISSINNPDL 354
+ +++ ++K R ++ V L+ +MD + D +L L+ +
Sbjct: 213 NRGLRVYHVYEKMRNKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVT 272
Query: 355 GLVF--------RVANKYESLGN---SLSKS---VYDGIHRALTKLGRFDEAEKMMKAMK 400
+V R+ E LG L K Y + + L G D ++ + MK
Sbjct: 273 FMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPAGNLDACLRVWEEMK 332
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
EPD Y+ +I GL K GR ++ + EM+ GC+ D + L++ A +V+
Sbjct: 333 RDRVEPDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVE 392
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A ++ Y AD + LI G + RV AYKL ++ + L P T K L
Sbjct: 393 LAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLF-QLTVREGLEPDFLTVKPL 451
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSS 580
+ A R+EE LL M+K +P + D S+F L K+ P
Sbjct: 452 LVAYAEANRMEEFCKLLEQMQKLGFP--------------VIADLSKFFSVLVEKKGPIM 497
Query: 581 AAYLQVFESFFNEGR-HYEAKDLLYKCPHHIRQDSKISLLFGSAKS 625
A L+ F +G E ++ H I + K LF K
Sbjct: 498 A--LETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKG 541
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 145/348 (41%), Gaps = 25/348 (7%)
Query: 129 STVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
S + ++++ L + + L RM+E C + Y +++ +L A +L A +
Sbjct: 270 SVTFMVLVKGLCKCGRIDEMLEVLGRMRERLCKPDVFAYTALVKILVPA---GNLDACLR 326
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE---DMKIE--LSDNFVLTVLKELR 243
+ M ++ +V K +++G ++ + E +MK + L D + L E
Sbjct: 327 VWEEMKRDRVEPDV-KAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAF 385
Query: 244 IYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ K F + + SGY+ + Y ++ L V+ + + + +EG E D
Sbjct: 386 VAEGKVELAFDLLKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDF 445
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
T + + + ME+ KL E M + P + D S + P + L
Sbjct: 446 LTVKPLLVAYAEANRMEEFCKLLEQMQKLGF-PVIADLSKFFSVLVEKKGPIMAL----- 499
Query: 362 NKYESLG-----NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
E+ G +S +Y+ +L K+G +A + MK +PD+ TY I
Sbjct: 500 ---ETFGQLKEKGHVSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAIL 556
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
L G ++AC + + E CIP + ++ L +G C E+D A+L
Sbjct: 557 CLVDLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAML 604
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 12/196 (6%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP-SVQDCSLLLRSISSI 349
++K++G+ + ++ Y K ++ A+ LF+ M KP S C+ +L +
Sbjct: 504 QLKEKGH-VSVEIYNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLV--- 559
Query: 350 NNPDLGLVFRVA---NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK-AMKNAGFE 405
DLG + N+ + S + Y + + L ++G DEA +++ + N
Sbjct: 560 ---DLGEIKEACACHNRIIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSDG 616
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P YS I CK+ E +VL+EM E GC D + +I G C ++ A
Sbjct: 617 PLEFKYSLTIIHACKSNVAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKV 676
Query: 466 FAKMMEKNYDADADLL 481
F+ + E+N+ +++ +
Sbjct: 677 FSNLRERNFLTESNTI 692
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 86/472 (18%), Positives = 176/472 (37%), Gaps = 28/472 (5%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKK 179
+K +P +Y+ ++ LV L +KED E T++ ++ G+ K +
Sbjct: 227 NKFGVKPRVFLYNRVMDALVRTGHLDLALSVYDDLKEDGLVEESVTFMVLVKGLCKCGRI 286
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
L L + + + K A LV +++ + D + E+MK + V
Sbjct: 287 DEMLEVLGRMRERLCKPDVFAYTA--LVKILVPAGNLDACLRVWEEMKRD-------RVE 337
Query: 240 KELRIYPVKALGFFRWVGEHSGYKH-----------NTITYNGILRVLARHESVRDFWNV 288
+++ Y +G + GY+ + + Y ++ V +++
Sbjct: 338 PDVKAYATMIVGLAKGGRVQEGYELFREMKGKGCLVDRVIYGALVEAFVAEGKVELAFDL 397
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
++++ GY D+ YI + ++ A KLF+ + +P LL + +
Sbjct: 398 LKDLVSSGYRADLGIYICLIEGLCNLNRVQKAYKLFQLTVREGLEPDFLTVKPLLVAYAE 457
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N + ++ + + LG + + + K G E + +K G
Sbjct: 458 ANR--MEEFCKLLEQMQKLGFPVIADLSKFFSVLVEKKGPIMALETFGQ-LKEKGHVSVE 514
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
I Y+ + L K G + A ++ DEM+ PD T+ I E+ A C +
Sbjct: 515 I-YNIFMDSLHKIGEVKKALSLFDEMKGLSLKPDSFTYCTAILCLVDLGEIKEACACHNR 573
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
++E + L G ++ A L+ + + V P + + I +
Sbjct: 574 IIEMSCIPSVAAYSSLTKGLCQIGEIDEAMLLVRDCLGNVSDGPLEFKYSLTIIHACKSN 633
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY 577
E+ +++L M +Q + IS K GT+E+A + L + +
Sbjct: 634 VAEKVIDVLNEMIEQGCSLDNVIYCSIISGMCKHGTIEEARKVFSNLRERNF 685
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 151/334 (45%), Gaps = 10/334 (2%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
D + + L D + ++N + +L V ALG F W +GY H Y+ ++ +L
Sbjct: 116 DSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDIL 175
Query: 277 ARHESVRDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
R + W +V+EM+ EGY + + T K+ R+ + +DAV+ F + +
Sbjct: 176 GRRKKFSFMWELVKEMENLEGY-VSLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKD 234
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAE 393
++ ++L+ ++ G V + + +S+ ++ + K + D+A
Sbjct: 235 IEALNVLMDALVK-----EGSVEHAYSAFMEFKDSIHVDFQSFNILLHGYCKARKLDDAR 289
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
K+M M GF+P+ ++Y+ I CK F + + EM+E C P++ T+TI +
Sbjct: 290 KIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHAL 349
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
A +V++AL + M DA LI R+ A+ + +M +K + P
Sbjct: 350 GKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDM-KKQGVSPD 408
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ T+I E A+ LLR M++ + P
Sbjct: 409 LLTYNTMITSACTHLEEENALKLLRRMEEDSCKP 442
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 95/481 (19%), Positives = 180/481 (37%), Gaps = 74/481 (15%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
+D + L + T+ + +L + ND A F W + + +Y LM+
Sbjct: 115 TDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLFTWAKHQTGYVHPPDLYDLMVDI 174
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK----------------ASD 182
L + W ++ M+ Y+ T ++ L +A D
Sbjct: 175 LGRRKKFSFMWELVKEMENLEGYVSLVTMKKVMRRLARAGNFQDAVEAFRGIEKLGVRKD 234
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
+ ALN D +VKE ++++ +E D+
Sbjct: 235 IEALNVLMDALVKEGSVEHAYSAF---------------------MEFKDSI-------- 265
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
H ++ ++N +L + + D +++EM K+G++ ++
Sbjct: 266 ----------------HVDFQ----SFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVV 305
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+Y + K + + +F M + KP+V ++ + ++ V +
Sbjct: 306 SYTCFIELYCKLKDFRNVEAIFSEMQEKSCKPNVITYTIFMHALGKAKQ-----VNKALE 360
Query: 363 KYESLGNSLS---KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
YE + ++ S Y + LT+ GR +A + + MK G PD +TY+ +I C
Sbjct: 361 VYEMMKSNCCVPDASFYSSLIFVLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSAC 420
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
E+A +L MEE+ C PDI+T+ L++ C + M + N D
Sbjct: 421 THLEEENALKLLRRMEEDSCKPDIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLG 480
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+L+ G ++ A EM+ K L P T+K L+E+L E + +L
Sbjct: 481 TYVLLVGGLCKSGKLELACSFFEEMVMK-GLIPRDRTYKMLVEELEQNNLTEAKEKIQKL 539
Query: 540 M 540
M
Sbjct: 540 M 540
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 190/414 (45%), Gaps = 15/414 (3%)
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
++ +V + + ++ W + L ++ + VLK+L+ + V ALGFF W+
Sbjct: 270 VSTGHVVENVSQILRQLRWGPSAEEALVNLNCHMDAYQANQVLKQLQDHTV-ALGFFHWL 328
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
+ G+KH+ TY ++ +L R + ++++M ++G + + TY ++ + +
Sbjct: 329 KQLPGFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANY 388
Query: 317 MEDAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ DAV++F M +P V C+L+ + + + L + + ++ G S
Sbjct: 389 LNDAVEVFNQMQKAGCEPDRVTYCTLIDIHAKAGF----LNFAMEMYQRMQAAGLSPDTF 444
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + L K G A+K+ M G P+ +TY+ +I KA +++A + +M
Sbjct: 445 TYSVMINCLGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDM 504
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G PD T++I+++ + +D A F++M KN+ D + +L++ + V
Sbjct: 505 QNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNV 564
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A++ M+ L P T +L+ L RL +A NLL+ M P + +
Sbjct: 565 EKAWEWYQAMLH-AGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTL 623
Query: 555 YIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEG---RHYEAKDL 602
+S + + D + + +SV +P+ +L S +G RH+ +K L
Sbjct: 624 LLSCCTEARSPYDMGCYCELMSVTGHPAH-MFLSSLPSAGPDGQNVRHHVSKFL 676
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 171/399 (42%), Gaps = 9/399 (2%)
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
+ L S W+ +L + L + V VL+ V AL FF W Y H+ +
Sbjct: 140 ITLSSAWNPNFEGRLRHLLRSLKPSLVCAVLRSQADERV-ALNFFYWADRQWRYSHHPLV 198
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +L VL++ + + V+ M + G E+ + + + + + + +A+++ M
Sbjct: 199 YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQ 258
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+P++ C+ + + + L R + + G Y+ + + L R
Sbjct: 259 KAGVEPNLSICNTTIYVL--VKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNR 316
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENGCIPDIKTWT 447
++A +++ + + G PD ++Y V+ LCK + E ++++M +++ IPD T+
Sbjct: 317 IEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYN 376
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI D AL + +K + D +++ F + R++ A L+++M +
Sbjct: 377 TLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSR 436
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
P T+ +++ R++EA +L+ M K P + ++ + E
Sbjct: 437 -SCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLE 495
Query: 568 FLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ ++V E P++ Y V F EG+ EA DL
Sbjct: 496 AREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDL 534
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 150/323 (46%), Gaps = 7/323 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F + E G+ + + Y+ I+ + + + ++V +M D+ TY I
Sbjct: 391 ALAFLKE-AEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIV 449
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDLGLVFRVANKYESL 367
F + +++A K+ + M KP+ + LL + S + + + V+ ++
Sbjct: 450 DGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWT 509
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N+++ Y + + G+ EA + + M GF P + + +I LC+ + +A
Sbjct: 510 PNAIT---YGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEA 566
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L+E GC ++ +T +I G C +++ AL M N DA L +
Sbjct: 567 KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDA 626
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYP 546
+ R++ A +L+V+M+ K L P TF+++I + R+++ +NLL R++K++ +
Sbjct: 627 LGKKGRLDEAAELIVKMLSK-GLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRKPFR 685
Query: 547 PFPEPFVQYISKFGTVEDASEFL 569
++ + FG +E+A + L
Sbjct: 686 TIYNHVIEKLCDFGNLEEAEKLL 708
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 156/407 (38%), Gaps = 81/407 (19%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ KE +I VK L + + S + +TYN ++ +L++H D ++E + +G+
Sbjct: 346 LCKEKKIEQVKCL--MEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGF 403
Query: 298 EMDIDTYIKISRQF-QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
+D Y I F QK RM E SL++ S NPD+
Sbjct: 404 HIDKVGYSAIVHSFCQKGRMDEAK-------------------SLVIDMYSRSCNPDV-- 442
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
Y I +LGR DEA+KM++ M G +P+ ++Y+ ++
Sbjct: 443 -----------------VTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLN 485
Query: 417 GLC-----------------------------------KAGRFEDACNVLDEMEENGCIP 441
GLC + G+ +AC++ EM E G P
Sbjct: 486 GLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFP 545
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+LIQ C +V A + + K + +I+GF + A +L
Sbjct: 546 TPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVL 605
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
+M + P T+ L + L RL+EA L+ M + P P F I ++
Sbjct: 606 EDMYLSNK-HPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQ 664
Query: 560 -GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G V+D L + VK P Y V E + G EA+ LL K
Sbjct: 665 WGRVDDMLNLLDRM-VKRKPFRTIYNHVIEKLCDFGNLEEAEKLLGK 710
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 119/275 (43%), Gaps = 23/275 (8%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G LS + + + ++ G+ A +++ M+ AG EP+ + I+ L K + E A
Sbjct: 226 GIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKA 285
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L+ M+ G PDI T+ LI+G+C N ++ AL A + K D ++
Sbjct: 286 LRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 345
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-------LM 540
+K++ L+ +M++ L P Q T+ TLI L ++A+ L+ +
Sbjct: 346 LCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHI 405
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-----PSSAAYLQVFESFFNEGR 595
K Y F Q G +++A K+L + Y P Y + + F GR
Sbjct: 406 DKVGYSAIVHSFCQK----GRMDEA----KSLVIDMYSRSCNPDVVTYTAIVDGFCRLGR 457
Query: 596 HYEAKDLLYKCPHHIRQDSKIS---LLFGSAKSNK 627
EAK +L + H + + +S LL G S K
Sbjct: 458 IDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGK 492
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 128/286 (44%), Gaps = 13/286 (4%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---EMDIDTYIKISRQFQ 312
V E + N ITY ++ R + + ++ EM ++G+ ++I+ I+ Q Q
Sbjct: 502 VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K + +A K E ++ +V + + ++ I + + L + + Y L N
Sbjct: 562 K---VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSV-LEDMY--LSNKHP 615
Query: 373 KSV-YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+V Y + AL K GR DEA +++ M + G +P +T+ VI C+ GR +D N+L
Sbjct: 616 DAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLL 675
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D M + P + +I+ C ++ A K++ DA+ VL+ L +
Sbjct: 676 DRMVKRK--PFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKK 733
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
AYK+ +M + L P + + +KL+ L EA L+
Sbjct: 734 GVALSAYKVACQMFRR-NLTPDLKLCEKVTKKLVLDGNLVEADKLM 778
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 142/320 (44%), Gaps = 34/320 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ +L R + V+ +M K GYE DI T + + + +
Sbjct: 108 QNLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 167
Query: 318 EDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRV 360
+AV L + M++ YKP + +L+ R ++ PDL V
Sbjct: 168 SEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 227
Query: 361 ANKYESLGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N G+ SL K +Y+ I L K D+A + M+ G
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+PD TY+ +I LC GR+ DA +L +M E P++ T+ LI ++ A
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M++++ D + + LINGF R++ A ++ M+ K L P T+ TLI+
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNTLIKGF 406
Query: 525 LGARRLEEAMNLLRLMKKQN 544
A+R+EE M L R M ++
Sbjct: 407 CKAKRVEEGMELFREMSQRG 426
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 154/355 (43%), Gaps = 25/355 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GYK +T+T+N ++ L H + +++ M G + D+ TY + K ++ A
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 240
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + M G + +V + ++ + + D F + NK E+ G Y+ +
Sbjct: 241 LSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDA--FDLFNKMETKGIKPDVFTYNSLI 298
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L GR+ +A +++ M P+ +T++ +I K G+ +A + DEM +
Sbjct: 299 SCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSID 358
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ LI G C + +D A F M+ K+ D + LI GF KRV +L
Sbjct: 359 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMEL 418
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
EM ++ L T+ TLI+ L A + A + + M PP + Y
Sbjct: 419 FREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---DIITYSILLD 474
Query: 556 -ISKFGTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+G +E KAL V EY P+ Y + E G+ + DL
Sbjct: 475 GLCKYGKLE------KALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDL 523
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 139/301 (46%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + S LL +I+ +N D +V + + +
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFD--VVISLGEQMQ 108
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+LG + Y + + + A ++ M G+EPD +T S ++ G C R
Sbjct: 109 NLGIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 168
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M E G PD T+ LI G N+ A+ +M+ + D ++
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 228
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + ++ A LL +M EK ++ + T+I+ L + +++A +L M+ +
Sbjct: 229 NGLCKRGDIDLALSLLKKM-EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P+ + + ++F EG+ EA+
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 602 L 602
L
Sbjct: 348 L 348
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ A+ + + + +EM + + +I TY + F +++A ++F
Sbjct: 325 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
M+ P V + L++ + G+ +FR ++ +GN+++ Y+ + + L
Sbjct: 385 TLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YNTLIQGL 441
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+K+ K M + G PD ITYS ++ GLCK G+ E A V + ++++ P+I
Sbjct: 442 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNI 501
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 561
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M E L P + TLI L
Sbjct: 562 MKEDGTL-PDSGCYNTLIRARL 582
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG----RFDEAEKM 395
SL++R ++ +P L +R A K+ YD L++ G + D+A +
Sbjct: 18 SLVVRGNAATVSPSLSFFWRRAFS--------GKTSYD-YREKLSRNGLSELKLDDAVAL 68
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M + P I +S+++ + K +F+ ++ ++M+ G + T++IL+ C
Sbjct: 69 FGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFCR 128
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+++ AL KMM+ Y+ D L L+NG+ KR++ A L+ +M+E + +P
Sbjct: 129 RSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVE-MGYKPDTV 187
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
TF TLI L + EA+ L+ M + P
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQP 219
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 105/235 (44%), Gaps = 5/235 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN +++ + + V + + EM + G + TY + + + + A K+F
Sbjct: 395 DVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 454
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV-FRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ P + S+LL + + LV F K + N + Y+ + +
Sbjct: 455 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT---YNIMIEGM 511
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K G+ ++ + ++ G +P+ I Y+ +I G C+ G E+A + EM+E+G +PD
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ LI+ + + +M + DA + ++IN L R+ +Y
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 625
>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
Length = 813
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 191/492 (38%), Gaps = 65/492 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDH--CYIEEETYLSIL-GVLKKA--KKAS 181
P Y ++L++L + Q LR M E C Y +++ G K+ KA
Sbjct: 177 PDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKAC 236
Query: 182 DLAALNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTV 238
DL F++ + + I+ D + +V+ + + DK L M K L DN+
Sbjct: 237 DL-----FNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNS 291
Query: 239 LKELRIYPVKALGFFRWVGEHS------GYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
L IY + G ++ S G + +T N ++ L +H ++D +V + M
Sbjct: 292 L----IYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSM 347
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+G + DI +Y + + + D +LF M+ P
Sbjct: 348 AMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPD----------------- 390
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+++ + +A K G D A + M+ G EPD +TYS
Sbjct: 391 --------------------SHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYS 430
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
VI LC+ G+ +DA ++M + G P I T+ LIQG C ++ +A +MM K
Sbjct: 431 TVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNK 490
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
D + +IN RV A + + + L P + TL++ ++E
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIF-DFTISIGLHPNVMVYNTLMDGYCLVGKMEN 549
Query: 533 AMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFE 588
A+ + +M P V K G +++ S F + L PS+ Y +
Sbjct: 550 ALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILH 609
Query: 589 SFFNEGRHYEAK 600
F GR AK
Sbjct: 610 GLFQAGRTVPAK 621
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 150/350 (42%), Gaps = 15/350 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G ++ +N +++ A+ + + EM+++G E D+ TY + + M+DA
Sbjct: 386 GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDA 445
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL----GLVFRVANKYESLGNSLSKSVY 376
V+ F M+D PS+ L++ + + DL LV ++ NK G +
Sbjct: 446 VEKFNQMIDQGVAPSISTYHFLIQGFCT--HGDLLKAKDLVLQMMNK----GMRPDIGCF 499
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I L KLGR +A+ + + G P+ + Y+ ++ G C G+ E+A V D M
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ + L+ G+C +D L F +++ K L +++++G R
Sbjct: 560 AGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVP 619
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFV 553
A EM E + + T+ ++ L +EA+ L + + N +
Sbjct: 620 AKVKFHEMTES-GIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMI 678
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + VE+A + ++S PS Y + + EG EA D+
Sbjct: 679 AGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDM 728
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 156/367 (42%), Gaps = 11/367 (2%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV-EEMKKEGYEMDIDTY 304
P L FF V + +G +TI + +LR L + + +++ M G D+ +Y
Sbjct: 124 PKLTLAFFGQVLK-TGLGIDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSY 182
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYK--PSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+ + R A +L M +G P+ + ++ D+ + N
Sbjct: 183 CIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDGF--FKEGDVNKACDLFN 240
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ G S S Y+ + AL K D+AE +++ M + G PDN TY+ +I+G G
Sbjct: 241 EMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTG 300
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
++++A V +M G +PD+ T L+ C ++ A F M K D
Sbjct: 301 QWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYK 360
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+++NG+ ++ + +L M+ + P F LI+ L+ A + M++
Sbjct: 361 IMLNGYATKGCLVDLTELFNLMLSD-GIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMRE 419
Query: 543 QNYPPFPEPFVQYIS---KFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
Q P + I+ + G ++DA E F + + PS + Y + + F G +
Sbjct: 420 QGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLK 479
Query: 599 AKDLLYK 605
AKDL+ +
Sbjct: 480 AKDLVLQ 486
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 135/318 (42%), Gaps = 12/318 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY+ ++ L R + D +M +G I TY + + F + A
Sbjct: 421 GVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKA 480
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE---SLGNSLSKSVYD 377
L MM+ +P + + ++ ++ LG V N ++ S+G + VY+
Sbjct: 481 KDLVLQMMNKGMRPDIGCFNFIINNLCK-----LGRVMDAQNIFDFTISIGLHPNVMVYN 535
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ +G+ + A ++ M +AG +P+ + Y ++ G CK GR ++ ++ E+
Sbjct: 536 TLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + I++ G A A + F +M E D +++ G + A
Sbjct: 596 GIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEA 655
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
LL + + + ++ T +I + RR+EEA +L + + P + +
Sbjct: 656 I-LLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMT 714
Query: 555 YISKFGTVEDASEFLKAL 572
+ K G VE+A + ++
Sbjct: 715 NLIKEGLVEEADDMFSSM 732
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 114/281 (40%), Gaps = 38/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +N I+ L + V D N+ + G ++ Y + + ME+A
Sbjct: 491 GMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENA 550
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+++F+ M+ +P+V VY +
Sbjct: 551 LRVFDVMVSAGIQPNV-------------------------------------VVYGTLV 573
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+GR DE + + + + G +P Y+ ++ GL +AGR A EM E+G
Sbjct: 574 NGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIA 633
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D T++I++ G + D A+L F ++ N D L+++I G +RV A L
Sbjct: 634 MDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDL 693
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
I + L P T+ ++ L+ +EEA ++ M+
Sbjct: 694 FAS-ISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSME 733
Score = 46.2 bits (108), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 101/245 (41%), Gaps = 39/245 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ L FR + H G K +T YN IL L + EM + G MD TY
Sbjct: 584 EGLSLFREI-LHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTY--- 639
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
++ G +K S D ++LL F+ + ++
Sbjct: 640 -----------------SIVLGGLFKNSCSDEAILL--------------FK---ELHAM 665
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ + + + + ++ R +EA+ + ++ +G P +TYS ++ L K G E+A
Sbjct: 666 NVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEA 725
Query: 428 CNVLDEMEENGC-IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
++ ME GC P+ + +++ E+ RA +K+ E+++ D +LI+
Sbjct: 726 DDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLID 785
Query: 487 GFLSQ 491
F S+
Sbjct: 786 LFSSK 790
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD KK + + DT +
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ ++ L V +
Sbjct: 108 LEHLMKXKYFKLVWGFYKEILECGYPASLYFFNILMHRFC--KEGEMRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + KLG DE ++ AM+ +G +PD TYS +I GLCK R ++A
Sbjct: 166 GLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ EM +NG +P+ T+T LI GHC +D A+ + +M+ + + D + LI G
Sbjct: 226 NGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A LL EM K L+P + T+ TLI+ LE A L M K++
Sbjct: 286 LCKKGDLKQARYLLDEMSRK-GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRL 344
Query: 548 FPEPFVQYI---SKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I + G DA + L+ L V P Y + F +G +A +LL
Sbjct: 345 DDVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELL 404
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 140/301 (46%), Gaps = 12/301 (3%)
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
GF++ + E GY + +N ++ + +R +V + + K G + ++ +
Sbjct: 122 GFYKEILE-CGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNG 180
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLG 368
+ K +++ +L M +P V S+L+ + + D AN E L
Sbjct: 181 YIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMD------EANGLFGEMLD 234
Query: 369 NSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
N L + + + K GR D A + + M N GF PD +TY+ +I+GLCK G +
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQ 294
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LDEM G PD T+T LI G C +++ A +M++++ D + LI
Sbjct: 295 ARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIF 354
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + R A K+L EM+ +V L+P T+ ++ + +++A LLR M++
Sbjct: 355 GLCQEGRAVDAEKMLREML-RVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRV 413
Query: 547 P 547
P
Sbjct: 414 P 414
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++ + ++ +M +G+ D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ S DL F + + L VY +
Sbjct: 295 ARYLLDEMSRKGLKPDKITYTTLIDG--SCKEGDLETAFELRERMIKESIRLDDVVYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M G +PD+ TY+ ++ CK G + A +L EM+ NG
Sbjct: 353 IFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGR 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPCVVT 418
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + +TYN ++ R + + + +++ M +G + + TY I K
Sbjct: 281 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 340
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A + + M+ P ++LL + N ++ R+ ++ S G +
Sbjct: 341 LRAKGVLDEMLKIGMSPDTATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 398
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L+K G D+A K + MKNAG PDN+ Y+ +I G C+ G +A V DEM E
Sbjct: 399 ALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 458
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC+ D+ T+ ++ G C + A F +M E+ D LING+ +N A
Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYP 546
L MI++ L+P T+ TLI+ +E+ L ++ ++ YP
Sbjct: 519 VTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 567
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 33/280 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN IL L + + + + + EM + G D T+ + + K M A
Sbjct: 459 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 518
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISS-----------------------------INN 351
V LFE M+ KP V + L+ IN
Sbjct: 519 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 578
Query: 352 -PDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
++G V FR+ ++ G + + I + + G +A++ + M G PD
Sbjct: 579 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 638
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
ITY+ +I G K + A ++++ME +G +PD+ T+ +++ G + A L
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 698
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
KM+E+ + D LING ++Q + A+++ EM+++
Sbjct: 699 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 144/363 (39%), Gaps = 58/363 (15%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + +Y++++ + + M E C ++ TY +IL L K K S+
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSE---- 482
Query: 187 NQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
D + E+ V T ++ G D + K + ++ + N
Sbjct: 483 ---ADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL--------- 530
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMD 300
K + +TYN ++ + E V + WN + + + Y
Sbjct: 531 -------------------KPDVVTYNTLIDGFCKGSEMEKVNELWN--DMISRRIYPNH 569
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
I I I+ + + +A +L++ M++ ++ ++ C+ +++ N
Sbjct: 570 ISYGILIN-GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN--------A 620
Query: 361 ANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
E L N L K + Y+ + K D A ++ M+N+G PD ITY+ +
Sbjct: 621 VKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ G + GR ++A ++ +M E G PD T+T LI GH N + A +M+++ +
Sbjct: 681 LNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGF 740
Query: 475 DAD 477
D
Sbjct: 741 VPD 743
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
FRV +S G +S + + + L K+G D A ++ + + +G + + T + +I
Sbjct: 207 FRV---LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 263
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCK + E+ + L +MEE G PD+ T+ LI +C ++ A M K
Sbjct: 264 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 323
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ +ING + A +L EM+ K+ + P AT+ L+ + + +A +
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVECCRNDNMMDAERIF 382
Query: 538 RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNE 593
M Q P F + +SK G ++ A ++ + + + P + Y + F
Sbjct: 383 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 442
Query: 594 GRHYEA 599
G EA
Sbjct: 443 GVMSEA 448
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 163/383 (42%), Gaps = 39/383 (10%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY+ NT+T+N ++ L H + +++ M +G + D+ TY + K +
Sbjct: 180 TGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK--------YESLGN 369
A L M G +P V + ++ + + D L L + K Y SL +
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299
Query: 370 SL---------SKSVYDGIHR--------------ALTKLGRFDEAEKMMKAMKNAGFEP 406
L S+ + D I R A K G+ EAEK+ M +P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+TYS +I G C R ++A + + M C PD+ +++ LI+G C A VD + F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M ++ + LI G + A ++ EM+ + P T+ TL++ L
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCK 478
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAA 582
+LE+AM + +++ P + ++ + K G VED + LS+K P A
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 583 YLQVFESFFNEGRHYEAKDLLYK 605
Y + F +G EA D L+K
Sbjct: 539 YNTMISGFCRKGSKEEA-DALFK 560
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + S LL +I+ +N D+ V + + +
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV--VISLGEQMQ 108
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+LG + Y + + + A ++ M G+EP+ +T S ++ G C + R
Sbjct: 109 NLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M G P+ T+ LI G N+ A+ +M+ K D V++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVV 228
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + + A+ LL +M E+ +L P + T+I+ L + +++A+NL + M+ +
Sbjct: 229 NGLCKRGDTDLAFILLNKM-EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P + + ++F EG+ EA+
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 602 L 602
L
Sbjct: 348 L 348
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 37/357 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ ++ R + V+ +M K GYE +I T + + + +
Sbjct: 108 QNLGMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 318 EDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDL------ 354
+AV L + M Y+P+ + +L+ R ++ PDL
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVV 227
Query: 355 ----------GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
L F + NK E +Y I L K D+A + K M+ G
Sbjct: 228 VNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P+ +TYS +I LC GR+ DA +L +M E PD+ T++ LI ++ A
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ +M++++ D LINGF R++ A ++ M+ K P ++ TLI+
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVSYSTLIKGF 406
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP 578
A+R++E M L R M ++ + +Q + + G + A E K + P
Sbjct: 407 CKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVP 463
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/444 (23%), Positives = 186/444 (41%), Gaps = 42/444 (9%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
L N +A A + + K +P Y +++ L + ++ L +M++
Sbjct: 198 LHNKASEAVALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGV 256
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKK 222
Y +I+ L K K D ALN F + K I + V +L+ + W D +
Sbjct: 257 LIYTTIIDGLCKNKHMDD--ALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDA-SRL 313
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L DM E +I P + T++ ++ + +
Sbjct: 314 LSDMI-------------ERKINP------------------DVFTFSALIDAFVKEGKL 342
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ + +EM K + I TY + F +++A ++FEFM+ P V S L
Sbjct: 343 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTL 402
Query: 343 LRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
++ D G+ +FR ++ +GN+++ Y + + L + G D A+++ K M +
Sbjct: 403 IKGFCKAKRVDEGMELFREMSQRGLVGNTVT---YTTLIQGLFQAGDCDMAQEIFKEMVS 459
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G P+ +TY+ ++ GLCK G+ E A V + ++ + P I T+ I+I+G C A +V+
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
F + K D + +I+GF + A L EM E L P + TLI
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL-PNSGCYNTLI 578
Query: 522 EKLLGARRLEEAMNLLRLMKKQNY 545
L E + L++ M+ +
Sbjct: 579 RARLRDGDREASAELIKEMRSCGF 602
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 95/239 (39%), Gaps = 38/239 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ + FR + + G NT+TY +++ L + + +EM +G +I TY +
Sbjct: 414 EGMELFREMSQR-GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTL 472
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K +E A+ +FE++ +P++
Sbjct: 473 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIY------------------------------ 502
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
Y+ + + K G+ ++ + + G +PD + Y+ +I G C+ G E+A
Sbjct: 503 -------TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ EM+E+G +P+ + LI+ + + + +M + DA + ++ N
Sbjct: 556 DALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 154/356 (43%), Gaps = 15/356 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+N ++ R V +V+ M G + I TY + + K R + A ++F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF 250
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSVYDGIHRA 382
M P V+ ++L+ + + F + ++Y + + +S S G+
Sbjct: 251 RTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVT-PDVVSFSCLIGL--- 306
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
++ G D A ++ MK G PD + Y+ VI G C+AG +A V DEM GC+PD
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ L+ G C + + A +M E+ D LI+G+ Q A +L
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
++ + RLRP T+ +LI+ + L +A L M + P + I
Sbjct: 427 TLLRQ-RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEK 485
Query: 560 GTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDS 614
G VEDA FL + K P+ Y + + + G + + L K +RQD+
Sbjct: 486 GQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQK----MRQDN 537
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 140/316 (44%), Gaps = 8/316 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +TYN +L+ L +H V M + D+ ++ + F + +++A
Sbjct: 222 GLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEA 281
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-LGLVFRVANKYESLGNSLSKSVYDGI 379
VK ++ M P V S L+ S D G R + + LG +Y +
Sbjct: 282 VKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR---EMKGLGLVPDGVIYTMV 338
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ G EA ++ M G PD +TY+ ++ GLCK R DA +L+EMEE G
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGV 398
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+T LI G+C + AL F ++ + D + LI+G + + A +
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYPPFP--EPFVQYI 556
L +M + + P T+ LI+ ++E+A L ++KK N P ++
Sbjct: 459 LWDDMHAR-EILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGY 517
Query: 557 SKFGTVEDASEFLKAL 572
+ G V+ +FL+ +
Sbjct: 518 CRSGNVKKGQQFLQKM 533
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 114/552 (20%), Positives = 233/552 (42%), Gaps = 84/552 (15%)
Query: 14 ANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINT-CQKIFFSTSPNSSLEL 72
+N+LL++ S + P + + +SS + N ++T +++ C+ + F
Sbjct: 125 SNALLAVLSRAGWPHLAQEAYRLVLSSDSEVN-AYTLNIMVHSYCKTLEF---------- 173
Query: 73 ILACDWSDELENKLEE--LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
D +D + +++E+ + P + +V+ R D + A A + + ++ +P
Sbjct: 174 ----DGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRG-LKPGIV 228
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE--TYLSILGVLKKAKKASDLAALNQ 188
Y+ +L+ L + R M D C + + ++ ++G + + + A+
Sbjct: 229 TYNSVLKGLCKHRRFDKAKEVFRTM--DQCSVAPDVRSFNILIGGFCRVGEVKE--AVKF 284
Query: 189 FHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV 247
+ + + + D V+ L+ + D G L +MK L ++ + IY +
Sbjct: 285 YKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMK-------GLGLVPDGVIYTM 337
Query: 248 KALGFFRWVGEHS------------GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
GF R G S G + +TYN +L L + + D ++ EM++
Sbjct: 338 VIGGFCR-AGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEER 396
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G D+ T+ + + + E+A++LF+ ++ +P V
Sbjct: 397 GVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVV------------------ 438
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
Y SL DG+ R G +A ++ M P++ITYS +I
Sbjct: 439 -------TYNSL--------IDGMCRK----GDLAKANELWDDMHAREILPNHITYSILI 479
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
C+ G+ EDA LDEM + G +P+I+T+ +I+G+C + V + KM + N
Sbjct: 480 DSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D + LI+G++ ++ ++GA+ + ++EK +RP T+ +I +++A
Sbjct: 540 PDLITFNTLIHGYIKEENMHGAFNVF-NIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGR 598
Query: 536 LLRLMKKQNYPP 547
+ + M P
Sbjct: 599 VFKGMGDSGIEP 610
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 118/300 (39%), Gaps = 9/300 (3%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESL 367
R + + R +A + F ++D + LL +S P L +R+ +S
Sbjct: 95 RTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSE 154
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N+ + ++ +H L FD A+ ++ M+ PD +T++ +I +AG + A
Sbjct: 155 VNAYTLNIM--VHSYCKTL-EFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAA 211
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++D M G P I T+ +++G C D+A F M + + D ++LI G
Sbjct: 212 IALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F V A K EM + + P +F LI ++ A LR MK P
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRY-VTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVP 330
Query: 548 FPEPFVQYISKFGTVEDASEFLKA----LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I F SE L+ + P Y + + R +A+ LL
Sbjct: 331 DGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLL 390
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 2/180 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ITY+ ++ V D + ++EM K+G +I TY I + + + ++ +
Sbjct: 471 NHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFL 530
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P + + L+ I ++ F V N E Y+ I +
Sbjct: 531 QKMRQDNVFPDLITFNTLIHGY--IKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFS 588
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G +A ++ K M ++G EPD TY +I G AG + A + DEM G PD K
Sbjct: 589 EQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDK 648
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G F+ M K M PD +TY+ +I G + G +DA V M ++G PD T+
Sbjct: 560 GAFNVFNIMEKEM----VRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTY 615
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LI GH A +A +M+ + + D
Sbjct: 616 MSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/401 (22%), Positives = 177/401 (44%), Gaps = 34/401 (8%)
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY-----PV 247
+V + +AK + +V+ W+ +K + N T+L ++ +
Sbjct: 4 LVFQCGETQLAKIVCGIVVKGHWNSL-------LKPNVGSNLTSTILNQVLLNLSLDGCC 56
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---------- 297
+ FF+WV + +KH+ + ++ LA+H+ + N++E + Y
Sbjct: 57 VSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 116
Query: 298 ---EMDIDTYIKISRQFQKF----RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
D D+ +I F RM +DA+++FE M +KP + C++LL S++
Sbjct: 117 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 176
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
++ V++V K +G + +++ + A K G ++AE+++ M++ PD T
Sbjct: 177 LTNM--VWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT 234
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I CK G +A + D ME G PDI T+ LI G C + AL F ++
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI- 293
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ LI+G+ + A +L E++E L P T+ +++ KL ++
Sbjct: 294 -NGATPNHVTYTTLIDGYCRVNDLEEALRLR-EVMEVEGLHPGVVTYNSILRKLCEEGKI 351
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKA 571
++A LL M ++ P I+ + + D +K
Sbjct: 352 KDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 139/348 (39%), Gaps = 11/348 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ + V ++ EM+ D+ TY + + K M +A
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ + + M G P + + L+ L +FR N G + + Y +
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN-----GATPNHVTYTTL 306
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++ +EA ++ + M+ G P +TY+ ++ LC+ G+ +DA +L+EM E
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T LI +C ++ A+ KM+E D LI+GF V+ A +
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYI 556
L EM++ P +T+ L++ E + L + ++ ++ +
Sbjct: 427 FLFEMLD-AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRL 485
Query: 557 SKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDLL 603
K +E A + K S Y + ++F G+ A D+L
Sbjct: 486 CKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 6/263 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR E +G N +TY ++ R + + + E M+ EG + TY I
Sbjct: 285 EALRLFR---EINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSI 341
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R+ + ++DA +L M + +P C+ L+ + I D+G +V K
Sbjct: 342 LRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG--DMGSAMKVKKKMLEA 399
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + + KL D A++ + M +AGF P TYS ++ E
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAV 459
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DE+ G DI + LI+ C ++++ A F M K D+ + L
Sbjct: 460 IRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYA 519
Query: 488 FLSQKRVNGAYKLLVEMIEKVRL 510
+ + A +L EM +K RL
Sbjct: 520 YFKAGKAIAASDMLDEM-DKRRL 541
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYI 305
R V E G +TYN ILR L ++D ++ EM + E D I+ Y
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 306 KI----SRQFQKFRMMEDAVK-------------------------LFEFMMDGPYKPSV 336
KI S K +M+E +K LFE M+D + PS
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE-MLDAGFSPSY 440
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
S L+ S +N + V R+ ++ G + SVY + R L K+ + + AE++
Sbjct: 441 STYSWLVDSYYDQDNKEA--VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIF 498
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
M+ G + D++ Y+ + + KAG+ A ++LDEM++ + +K +
Sbjct: 499 TLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
>gi|302806226|ref|XP_002984863.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
gi|300147449|gb|EFJ14113.1| hypothetical protein SELMODRAFT_121207 [Selaginella moellendorffii]
Length = 564
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 35/368 (9%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W D+ + L + L+ V +LK+ + V A FF W + +G+KH+ TY IL
Sbjct: 17 WGDETVRALAGLNANLNAYQVNEILKQQKEAGV-AYNFFIWARKQAGFKHDVHTYTTILG 75
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM-MDGPYK 333
+L R +S N+++EM +EG E ++ TY ++ + + ++ ++KLF M M G
Sbjct: 76 ILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEP 135
Query: 334 PSVQDCSLL-LRSISSINN---------------PD----------LGLVFRVANKYESL 367
V C+L+ L++ + ++ PD LG ++ Y+
Sbjct: 136 DRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLF 195
Query: 368 ------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
G + S Y+ I K G+FD A K+ ++ G+ PD +TY ++ L
Sbjct: 196 CEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNC 255
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G EDA V +EME G + D + +++ ++A F +M++ +
Sbjct: 256 GHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPAC 315
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ L++ +L + A +L M K L P T+ +L+ R E L LM
Sbjct: 316 NSLLSAYLRSSFYDAAGGVLGGM-AKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMG 374
Query: 542 KQNYPPFP 549
+P P
Sbjct: 375 GTGHPAHP 382
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 383 LTKLGR---FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L LGR FD ++ M G EP+ +TY+++I +A + + + + M+ GC
Sbjct: 74 LGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGC 133
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ LI A D A+ + +M + D ++I+ ++N AYK
Sbjct: 134 EPDRVTYCTLIDLQAKAGFHDAAMDLYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYK 193
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L EM ++ P T+ +I+ A + + A+ L +++ Y P + ++ +
Sbjct: 194 LFCEMTDR-GYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVL 252
Query: 557 SKFGTVEDASEFLKAL 572
G +EDA + + +
Sbjct: 253 GNCGHIEDAEQVFEEM 268
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 153/333 (45%), Gaps = 11/333 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ + T+N ++ R V ++ ++M G+ D+ +Y + F + +++
Sbjct: 40 SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDE 99
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV+LF M +P + + L++ + + GL+ + + + LG S Y +
Sbjct: 100 AVELFGEM----DQPDMHMYAALVKGLCKAGRGEEGLL--MLRRMKELGWRPSTRAYAAV 153
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ EAE+M++ M G P +T + VI CK GR DA VL+ M+ GC
Sbjct: 154 VDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 213
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ L+QG C +V +A+ KM + DA ++LI G + A++
Sbjct: 214 KPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFR 273
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
LL ++E L Q T+ LI L R ++A +L ++ + P F + +
Sbjct: 274 LL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 332
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFE 588
K G V+ A +FL K +S P + Y E
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIE 365
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 10/365 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T ++ + + D V+E MK G + ++ TY + + F + A
Sbjct: 177 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 236
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M P +LL+R + + FR+ E G + Y+ +
Sbjct: 237 MALLNKMRVCGVNPDAVTYNLLIRG--QCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 294
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR D+A + +++ G +P+ +T++ +I GLCK+G+ + A L++M GC
Sbjct: 295 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCT 354
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T++ I+ C L +M++K+ ++I+ L ++ +
Sbjct: 355 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 414
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---S 557
EM+ P T+ T + RL EA N+L M K + + +
Sbjct: 415 WGEMVSS-GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
G + A LK + SV P+ Y + R +D+L P + + ++
Sbjct: 474 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV---RMRLVEDVLPLTPAGVWKAIEL 530
Query: 617 SLLFG 621
+ +FG
Sbjct: 531 TDVFG 535
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 188/454 (41%), Gaps = 56/454 (12%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
++ + T+ +++ L K D ++A + F+ + + + +P++ ++ ++ L +
Sbjct: 284 IADQYTYNALINALCK-DGRTDQACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKVDIA 341
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
W L +M C + TY S + L K K + + L+ + + K++ V T+V
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE--GLSFIGEMLQKDVKPSTVNYTIV- 398
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
+ +LKE R Y + A + V SG + +T
Sbjct: 399 --------------------------IHKLLKE-RNYGLVARTWGEMVS--SGCNPDVVT 429
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R + + NV+ EM K G +D Y + + AV + + M
Sbjct: 430 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 489
Query: 329 DGPYKPSVQDCSLLLRSI------------------SSINNPDLGLVFRVANKYESLGNS 370
P+ +LLR + +I D+ +F V K E L NS
Sbjct: 490 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 549
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y I ++ GR +EA ++ MK + Y+ ++ CK+ R+ DA +
Sbjct: 550 ---GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 606
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ M ++G IP + ++ L+ G + D+A F K+Y D + V+I+G +
Sbjct: 607 VCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 666
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ + + ++++ M+E++ RP T+ L E+L
Sbjct: 667 KGHSDISREMII-MLERMNCRPSHQTYAMLTEEL 699
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 9/234 (3%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + R+L + A + + M +G+ PD T++ +I G C+ + + A ++ D+M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G D+ ++ LI+G C +D A+ F +M + D + L+ G R
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
+L M E + RP + +++ R+ +EA +L+ M ++ P
Sbjct: 130 EGLLMLRRMKE-LGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I+ + G + DA L+ + ++ P+ Y + + F NEG+ ++A LL K
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNK 242
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/365 (20%), Positives = 141/365 (38%), Gaps = 57/365 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N +T+N ++ L + V W +E+M G D TY K +
Sbjct: 314 ETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 373
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ + M+ KPS + ++++ + + + GLV R +
Sbjct: 374 QEGLSFIGEMLQKDVKPSTVNYTIVIHKL--LKERNYGLVARTWGE-------------- 417
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
M ++G PD +TY+ + C GR +A NVL EM +N
Sbjct: 418 ---------------------MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 456
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN-- 495
G D + L+ GH + + D A+ +M + +L+ + + V
Sbjct: 457 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 516
Query: 496 ------GAYKL--------LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
G +K L ++++K P T+ +++E R EEA +L+ LMK
Sbjct: 517 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 576
Query: 542 KQNYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHY 597
+ + + + ++ F + DA + ++ + P +Y + EG+
Sbjct: 577 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTD 636
Query: 598 EAKDL 602
+AK++
Sbjct: 637 KAKEI 641
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 87/199 (43%), Gaps = 11/199 (5%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ VI LC+ A L M +G PD T+ LI G+C N+VD A F KM
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + D LI GF R++ A +L EM + P + L++ L A R
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCKAGR 127
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE----DASEFLKALSVKEY-PSSAAYL 584
EE + +LR MK+ + P + + F E +A E L+ + K P
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVD-FRCWERKAKEAEEMLQEMFEKGLAPCVVTCT 186
Query: 585 QVFESFFNEGRHYEAKDLL 603
V ++ EGR +A +L
Sbjct: 187 AVINAYCKEGRMSDALRVL 205
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 9/293 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A R + +H G N+I Y ++ L++ V + ++EEM G D+ T+ +
Sbjct: 237 ACSLLRDMTKH-GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVI 295
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
K + DA KL + M+ + P LL + I L ++ K
Sbjct: 296 HGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIG--KLNEARKILIKIPCPN 353
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N++ ++ +G + G+ EA+ + + M N GF+PD TY+ ++ GLCK G A
Sbjct: 354 NAILNTLINGYVMS----GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++++EM GC P++ T+ IL+ G C A ++ A L +M + ++ + + LI
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+++V+ A LL EM K +P T+ +LI L R++EA L M
Sbjct: 470 LCRKEKVHVALNLLSEMCTK-GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 196/454 (43%), Gaps = 24/454 (5%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+S VY ++ L K+ + + L M C + +T+ ++ L K K D L
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED----MKIELSDNFVLTVLKEL 242
+++ DN+ + L +IGK E +KI +N +L L
Sbjct: 311 --VDRMLLRGFYPDNMTYGFLLHGLC-----RIGKLNEARKILIKIPCPNNAILNTLING 363
Query: 243 RIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ + A F + G++ + TYN ++ L + S+ ++V EM + G E
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 300 DIDTYIKISRQFQKFRMMEDA-VKLFEFMMDGPYKPSV-QDCSLLLRSISSINNPDLGLV 357
++ TY + K ++E+A + L E G SV +C + + L L+
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ K G Y+ + L K+ R DEA ++ M G +N+TY+ +I
Sbjct: 484 SEMCTK----GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L + G F+ A ++++M GC D T+ LI+ C +++ L + +M+ AD
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+++ING +V+ A++ L + I + P T+ +++ L R++EA+NL
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 538 RLMKKQNYPPFP---EPFVQYISKFGTVEDASEF 568
++ + P F+ + K G V DA F
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLF 692
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 23/275 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N++ YN ++ L R E V N++ EM +G + D+ TY + K +++A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 321 VKLFEFMM-DGPYKPSVQDCSL---LLR------SISSINNPDLGLVFRVANKYESLGNS 370
+LF M+ DG +V +L LLR +++ +N+ ++FR G +
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND----MLFR--------GCT 562
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L K Y+G+ +A K+G ++ ++ + M G D I+ + +I GLCK G+ ++A
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L + G +PDI T+ ++ G C + AL F ++ + DA + I+
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ VN A IE P T+ L+ LL
Sbjct: 683 EGMVNDACLFFYRGIEN-GFVPSNLTWNVLVYTLL 716
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 17/336 (5%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L L EL + L F VG GY H Y + L + ++ +MK+E
Sbjct: 82 LCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEE 141
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPD 353
G ++ I + + K A++L M Y +P+ + L+L + + N P
Sbjct: 142 GIVFRESIFMIIMKHYGKAGQPGQAIRLL-LDMRAVYLCEPTFKSYDLVLEILVTGNCPQ 200
Query: 354 LGL-VFRVANKYESLGNSLSKSVYD-GI-HRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ VF Y+ L +S +V+ GI +AL D A +++ M G P++I
Sbjct: 201 VATNVF-----YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIV 255
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y +I L + + +A +L+EM GC+PD++T+ +I G C N++ A +M+
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ + D L++G ++N A K+L+++ P A TLI + + +L
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-----CPNNAILNTLINGYVMSGQL 370
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+EA + L N+ P+ F I G ++ S
Sbjct: 371 KEAQSFLN-ETMINFGFQPDIFTYNILMHGLCKEGS 405
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 205/490 (41%), Gaps = 63/490 (12%)
Query: 64 TSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK- 122
+SPN++ + D L K +P L + VL++L N KA FF+++ +
Sbjct: 34 SSPNTTHQ-----DDQFLLSTKTTPWTPNLVNS----VLKRLWNHGPKALQFFHFLDNHH 84
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+++ ++ + L + W + RM+ +T+ + A K
Sbjct: 85 REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144
Query: 183 LAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD-----NFV 235
L N G +++A N T++DV+ S +K + ++ S N +
Sbjct: 145 AVKLFLNMHEHGCFQDLASFN---TILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 201
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L ++ P KAL + + E G N TYN +L+ R +R W EMKK
Sbjct: 202 LNGWCLIKRTP-KALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
E+D+ TY + F ++ A +F+ M+ PSV
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV------------------- 300
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ Y+ + + L K + A M + M G+EP+ TY+ +I
Sbjct: 301 ------------------ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GL AG F ++ ME GC P+ +T+ ++I+ + +EV++AL F KM +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 476 ADADLLDVLINGFLSQKRVNG---AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ D ++LI+G +KR A KLL+EM+E+ + P + TF ++ LL
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFI-PRKFTFNRVLNGLLLTGNQAF 461
Query: 533 AMNLLRLMKK 542
A +LRL K
Sbjct: 462 AKEILRLQSK 471
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWV-GEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ N V +VLK L + KAL FF ++ H Y H+ +++ + + AR W+++
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLL------ 342
M+ T+ ++ ++ + AVKLF M + G ++ ++L
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 343 ------------LRSISSINNPDLGLVF-------RVANKYESLGNSLSKSV------YD 377
LR S++ ++ R E L + + + Y+
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + G+ A + MK E D +TY+ V+ G AG + A NV DEM
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P + T+ +IQ C + V+ A++ F +M+ + Y+ + +VLI G +
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L+ M E P T+ +I +E+A+ L M + P
Sbjct: 355 EELMQRM-ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 123/291 (42%), Gaps = 8/291 (2%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVYDG 378
A++ F F+ D ++ V D S +I L V+ + ++ SL S +
Sbjct: 73 ALQFFHFL-DNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ G+ D+A K+ M G D +++ ++ LCK+ R E A + +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D T+ +++ G C +AL +M+E+ + + + ++ GF ++ A+
Sbjct: 192 SV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+ +EM +K T+ T++ A ++ A N+ M ++ P + +Q
Sbjct: 251 EFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K VE+A + + + Y P+ Y + F+ G ++L+ +
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/360 (24%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + J ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 286 LCKKGDLKQAHHLIDEMSVK-GLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ S G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 345 DEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 404
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 281 TLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T L G C A +M+ DA ++IN F + V
Sbjct: 341 NIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 72/181 (39%), Gaps = 37/181 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 275 DLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTT------------------ 316
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L + Y + L
Sbjct: 317 --LIDGCCKEG-----------------DLDSAFEHRKRMIQENIRLDEVAYTALXSGLC 357
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 358 QEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 417
Query: 445 T 445
T
Sbjct: 418 T 418
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 138/293 (47%), Gaps = 9/293 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A R + +H G N+I Y ++ L++ V + ++EEM G D+ T+ +
Sbjct: 237 ACSLLRDMTKH-GCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVI 295
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
K + DA KL + M+ + P LL + I L ++ K
Sbjct: 296 HGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIG--KLNEARKILIKIPCPN 353
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N++ ++ +G + G+ EA+ + + M N GF+PD TY+ ++ GLCK G A
Sbjct: 354 NAILNTLINGYVMS----GQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFA 409
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++++EM GC P++ T+ IL+ G C A ++ A L +M + ++ + + LI
Sbjct: 410 RDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICA 469
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+++V+ A LL EM K +P T+ +LI L R++EA L M
Sbjct: 470 LCRKEKVHVALNLLSEMCTK-GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNM 521
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/454 (23%), Positives = 196/454 (43%), Gaps = 24/454 (5%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+S VY ++ L K+ + + L M C + +T+ ++ L K K D L
Sbjct: 251 PNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKL 310
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED----MKIELSDNFVLTVLKEL 242
+++ DN+ + L +IGK E +KI +N +L L
Sbjct: 311 --VDRMLLRGFYPDNMTYGFLLHGLC-----RIGKLNEARKILIKIPCPNNAILNTLING 363
Query: 243 RIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ + A F + G++ + TYN ++ L + S+ ++V EM + G E
Sbjct: 364 YVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEP 423
Query: 300 DIDTYIKISRQFQKFRMMEDA-VKLFEFMMDGPYKPSV-QDCSLLLRSISSINNPDLGLV 357
++ TY + K ++E+A + L E G SV +C + + L L+
Sbjct: 424 NVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLL 483
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ K G Y+ + L K+ R DEA ++ M G +N+TY+ +I
Sbjct: 484 SEMCTK----GCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHA 539
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L + G F+ A ++++M GC D T+ LI+ C +++ L + +M+ AD
Sbjct: 540 LLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGAD 599
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+++ING +V+ A++ L + I + P T+ +++ L R++EA+NL
Sbjct: 600 TISCNIMINGLCKVGKVDNAFEFLRDAINR-GFVPDIVTYNSVLNGLCKVGRIKEALNLF 658
Query: 538 RLMKKQNYPPFP---EPFVQYISKFGTVEDASEF 568
++ + P F+ + K G V DA F
Sbjct: 659 DRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSF 692
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 127/275 (46%), Gaps = 23/275 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N++ YN ++ L R E V N++ EM +G + D+ TY + K +++A
Sbjct: 455 GLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEA 514
Query: 321 VKLFEFMM-DGPYKPSVQDCSL---LLR------SISSINNPDLGLVFRVANKYESLGNS 370
+LF M+ DG +V +L LLR +++ +N+ ++FR G +
Sbjct: 515 FRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVND----MLFR--------GCT 562
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L K Y+G+ +A K+G ++ ++ + M G D I+ + +I GLCK G+ ++A
Sbjct: 563 LDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEF 622
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L + G +PDI T+ ++ G C + AL F ++ + DA + I+
Sbjct: 623 LRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCK 682
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ VN A IE P T+ L+ LL
Sbjct: 683 EGMVNDACSFFYRGIEN-GFVPSNLTWNVLVYTLL 716
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 148/336 (44%), Gaps = 17/336 (5%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L L EL + L F VG GY H Y + L + ++ +MK+E
Sbjct: 82 LCKLLELPLDVPTLLEIFERVGGQKGYCHTFDVYYVFINKLGAIGKFKLIDKLLMQMKEE 141
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPD 353
G ++ I + + K A++L M Y +P+ + L+L + + N P
Sbjct: 142 GIVFRESIFMIIMKHYGKAGQPGQAIRLL-LDMRAVYLCEPTFKSYDLVLEILVTGNCPQ 200
Query: 354 LGL-VFRVANKYESLGNSLSKSVYD-GI-HRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ VF Y+ L +S +V+ GI +AL D A +++ M G P++I
Sbjct: 201 VATNVF-----YDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIV 255
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y +I L + + +A +L+EM GC+PD++T+ +I G C N++ A +M+
Sbjct: 256 YQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ + D L++G ++N A K+L+++ P A TLI + + +L
Sbjct: 316 LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP-----CPNNAILNTLINGYVMSGQL 370
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+EA + L N+ P+ F I G ++ S
Sbjct: 371 KEAQSFLN-ETMINFGFQPDIFTYNILMHGLCKEGS 405
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 41/451 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKK--AKKASDL 183
P Y+ ++R L +++ LRRM C ++ TY +I+ G K+ ++A++L
Sbjct: 182 PDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATEL 241
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
D + K D V T ++ G + + + LE + E
Sbjct: 242 -----LKDAIFKGFVPDRV--TYCSLINGLCAEGDVERALE-------------LFNE-- 279
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ K + + YN +++ L R + V+ EM ++G DI T
Sbjct: 280 -------------AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWT 326
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + K + DA + + Y P V + ++ D L ++ +
Sbjct: 327 YNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSAL--QLVER 384
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G + Y+ + L K G+ E + + M G P+ ITY+ +I CK +
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E+A V+ M ++G +PD ++ LI G C ++D A L F K+ EK Y A AD ++
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI + S+ + A K+ EMI K +P T++ L++ A ++ A L M +
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMISK-GYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSK 563
Query: 544 NYPPFPEPFVQYISKFGTVEDASEFLKALSV 574
+ P F + ++ SE + + +
Sbjct: 564 GFVPSMATFGRVLNSLAMNHRVSEAVAIIHI 594
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 135/307 (43%), Gaps = 15/307 (4%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL R + E G + Y ++R L H D ++ +EM + D+ T+
Sbjct: 61 PHVALRLLRSLPER-GCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFN 119
Query: 306 KISRQF-QKFRMMEDAVKLFEFMMDGPYKPSVQ--DCSLLLRSISSINNPDLGLVFRVAN 362
+ QK +ME L + + G SV C++ +R + + G +
Sbjct: 120 NVLHALCQKGDIMESGALLAKVLKRGM---SVNKFTCNIWIRGLC-----EGGRLEEAVA 171
Query: 363 KYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
ES+ ++ V Y+ + R L K + EA + ++ M N G PD+ TY+ +I G CK
Sbjct: 172 LVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
++A +L + G +PD T+ LI G CA +V+RAL F + K+ D +
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVV 291
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ L+ G Q + A +++ EM+E P T+ +I L + +A ++
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVED-GCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350
Query: 541 KKQNYPP 547
+ Y P
Sbjct: 351 IVKGYLP 357
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 147/344 (42%), Gaps = 12/344 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N +L L + + + ++ ++ K G ++ T R + +E+AV L E
Sbjct: 117 TFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE-S 175
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSVYDGIHRALTK 385
MD P V + L+R + + + R+ N+ G Y+ I K
Sbjct: 176 MDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQ----GCIPDDFTYNTIIDGYCK 231
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
EA +++K GF PD +TY +I GLC G E A + +E + PD+
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVV 291
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ L++G C + AL +M+E D +++ING ++ A ++ + I
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTV 562
K L P TF T+I+ +L+ A+ L+ M P + + + K G
Sbjct: 352 VKGYL-PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKA 410
Query: 563 EDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ +E + + +K P++ Y + E+F + EA ++ +
Sbjct: 411 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVR 454
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 89/212 (41%), Gaps = 6/212 (2%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR A ++++++ G + + Y V+ GL G DA ++ DEM PD+ T+
Sbjct: 59 GRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATF 118
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
++ C ++ + AK++++ + ++ I G R+ A L+ M
Sbjct: 119 NNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-- 176
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVE 563
+ P T+ TL+ L +++EA LR M Q P + I + ++
Sbjct: 177 DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQ 236
Query: 564 DASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
+A+E LK K + P Y + EG
Sbjct: 237 EATELLKDAIFKGFVPDRVTYCSLINGLCAEG 268
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 138/351 (39%), Gaps = 26/351 (7%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ D E+A FN K +P VY+ +++ L + + + M ED C+ +
Sbjct: 267 EGDVERALELFNEA-QAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIW 325
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE- 224
TY ++ L K SD A + +D +VK L DV + D K+L+
Sbjct: 326 TYNIVINGLCKMGNISDAAVV--MNDAIVK--------GYLPDVFTFNTMIDGYCKRLKL 375
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS------------GYKHNTITYNGI 272
D ++L + + + I L G+ G + N ITYN +
Sbjct: 376 DSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNIL 435
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ + + + V+ M ++G D ++ + F + ++ A LF+ + + Y
Sbjct: 436 IENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGY 495
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+ ++L+ + SS N + + ++ + S G Y + K D A
Sbjct: 496 SATADTFNILIGAYSSKLN--MQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRA 553
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ M + GF P T+ +V+ L R +A ++ M G +P++
Sbjct: 554 YVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVPEV 604
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 86/400 (21%), Positives = 175/400 (43%), Gaps = 8/400 (2%)
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
+ L S W+ K ++ ++ L + V VL+ V AL FF W Y+H+ +
Sbjct: 154 IGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQDDERV-ALKFFYWADRQWRYRHDPMV 212
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +L VL++ + + V+ MK+ G + ++++ + + + DA+K+ M
Sbjct: 213 YYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQ 272
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+P++ C+ + N + L R + + +G + Y+ + R L R
Sbjct: 273 RAGVEPNLLICNTTIDVFVRANRLEKAL--RFLERMQVVGIVPNVVTYNCMIRGYCDLHR 330
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM-EENGCIPDIKTWT 447
+EA +++ M + G PD ++Y ++ LCK R + +++ +M +E+G + D T+
Sbjct: 331 VEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYN 390
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI + D AL EK + D +++ + R++ A L+ EM+ K
Sbjct: 391 TLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSK 450
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
P T+ ++ +++A LL++M Y P + ++ + E
Sbjct: 451 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLE 510
Query: 568 FLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ +++ E P+S Y + EG+ EA D++
Sbjct: 511 AREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVV 550
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 129/579 (22%), Positives = 229/579 (39%), Gaps = 56/579 (9%)
Query: 74 LACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYS 133
L W+ + E ++ L L V VLR D D A FF W + ++R VY
Sbjct: 156 LRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQD-DERVALKFFYWADRQWRYRHDPMVYY 214
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFHDG 192
ML L + L MK Y E +L ++ +A + D L L
Sbjct: 215 SMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRA 274
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK------------------------- 227
V+ + + T +DV + ++ +K + LE M+
Sbjct: 275 GVEPNLL--ICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVE 332
Query: 228 --IELSDNF-----------VLTVL----KELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
IEL D+ T++ KE RI V+ L + + + G + +TYN
Sbjct: 333 EAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDL--MKKMAKEHGLVRDQVTYN 390
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF-EFMMD 329
++ +L +H+ + +++ +++G+ +D Y I K M +A L E +
Sbjct: 391 TLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSK 450
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
G P V + ++ + D + ++ + + N++S Y + L + G+
Sbjct: 451 GHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVS---YTALLNGLCRTGK 507
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
EA +MM + + P++ITYS ++ GL K G+ +AC+V+ EM G P +
Sbjct: 508 SLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINL 567
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L+Q C A + + K + +I+GF ++ A +L +M +
Sbjct: 568 LLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMY-LI 626
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEF 568
T+ TL++ L R+ EA L++ M + P P + I ++ +E +
Sbjct: 627 NKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDL 686
Query: 569 LKALS--VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ L + Y QV E G+ EA LL K
Sbjct: 687 VAILEKMILRQKCKTIYNQVIEKLCGLGKLEEADKLLGK 725
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 112/252 (44%), Gaps = 8/252 (3%)
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
++ G+ +A K++ M+ AG EP+ + + I +A R E A L+ M+ G +P++
Sbjct: 256 SRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV 315
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ +I+G+C + V+ A+ M K D ++ +KR+ L+ +
Sbjct: 316 VTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKK 375
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYISKFG 560
M ++ L Q T+ TLI L +EA+ L+ +++ + V + K G
Sbjct: 376 MAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEG 435
Query: 561 TVEDASEFLKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS- 617
+ +A + + + K + P Y V F G +AK LL H + + +S
Sbjct: 436 RMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSY 495
Query: 618 --LLFGSAKSNK 627
LL G ++ K
Sbjct: 496 TALLNGLCRTGK 507
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 157/367 (42%), Gaps = 52/367 (14%)
Query: 289 VEEMKKEGYEMDID----TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
V E K ++ D D ++K + K ++++ + M++ YKP V C+ L++
Sbjct: 61 VNETKPTKHDQDYDFRDTNFMKTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIK 120
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
N + +V E G Y+ + K R D A K++ MK GF
Sbjct: 121 GF--FNMKKIEKAIQVMEILEKHGKP-DVFAYNAVISGFCKADRVDHASKVLDRMKKRGF 177
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
EPD +TY+ +I C GR + A V+D++ ++ C P + T+TILI+ +D A+
Sbjct: 178 EPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK 237
Query: 465 CFAKMMEKNYDADADLLDVLING------------FLSQKRVNGAY-------------- 498
+M+ + D +V++NG FLS+ NG
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297
Query: 499 ---------KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
KL+ +M+ K P T+ TLI L +++EA N+L++MK++ P
Sbjct: 298 NEGKWEYGEKLMSDMLVK-GCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDG 356
Query: 550 ---EPFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+P + + + G V+ A EFL +S P +Y + S G EA ++ K
Sbjct: 357 YSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEK 416
Query: 606 -----CP 607
CP
Sbjct: 417 LGEVGCP 423
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 132/301 (43%), Gaps = 4/301 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TYN ++ + + + + + + K G + TY + R E
Sbjct: 246 GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYG 305
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
KL M+ +P+ S L+ ++ D V +V + + S YD +
Sbjct: 306 EKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYS---YDPL 362
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL + G+ D A + + M + G PD ++Y+ ++ LCK G ++A N+ +++ E GC
Sbjct: 363 ISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGC 422
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ ++ L ++ + RAL +M+ D D + LI+ V+ A +
Sbjct: 423 PPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIE 482
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LLV+M E + +P ++ T++ L +R+ +A+ +L M + P + I
Sbjct: 483 LLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGI 542
Query: 560 G 560
G
Sbjct: 543 G 543
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 146/327 (44%), Gaps = 8/327 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ + +H K + YN ++ + + V V++ MKK G+E D+ TY +
Sbjct: 130 KAIQVMEILEKHG--KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNIL 187
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F ++ A+++ + ++ KP+V ++L+ + +I + ++ ++ S
Sbjct: 188 IGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEA--TITQGGIDEAMKLLDEMLSR 245
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y+ + + K G D A + + + G TY+ ++ L G++E
Sbjct: 246 GLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYG 305
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++ +M GC P+ T++ LI C ++D A M EK D D LI+
Sbjct: 306 EKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISA 365
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +V+ A + L +MI L P ++ +++ L +EA+N+ + + PP
Sbjct: 366 LCREGKVDLAIEFLDDMISGGHL-PDILSYNSILASLCKNGNADEALNIFEKLGEVGCPP 424
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSV 574
Y + FG + + + ++AL +
Sbjct: 425 NAG---SYNTLFGALWSSGDKIRALGM 448
>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
Length = 694
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 142/298 (47%), Gaps = 7/298 (2%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F WV HN ++YN +R L + V + +V E +++ G D TY +
Sbjct: 345 FELWVMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGL 404
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGN 369
K + A+K+ + DG K S ++ +S D LG+V ++ +KY G
Sbjct: 405 CKNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQM-DKY---GC 460
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
LS V + + + + +EA + M+ G P ++Y+ +I GLCKA RF DA +
Sbjct: 461 ELSPHVCNPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYS 520
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ EM E PD+ T+++L+ G C ++D AL + +++ K + D + ++L++G
Sbjct: 521 FVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLC 580
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
S ++ A LL +++ P T TL++ L AR E A + M K + P
Sbjct: 581 SAGKIEDAL-LLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQP 637
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 188/398 (47%), Gaps = 17/398 (4%)
Query: 218 KIGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
+I + ++ K + +++ VLTVLK P +AL F+ + E G K +YN +L
Sbjct: 64 RIVELIKTQKCKCTEDVVLTVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNA 123
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTY---IKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ + + + G ++ TY IKIS + ++F +A L ++M
Sbjct: 124 FIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFV---EAKGLLDWMWSKDL 180
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
KP V ++ + + + DL V ++ G Y+ + K G + +
Sbjct: 181 KPDVYSYGTVINGM--VKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQG 238
Query: 393 EKMM-KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
+++ + +K + P+ +TY+ +I GLCK GRF+++ + + M++N C D+ T++ LI
Sbjct: 239 KEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLIC 298
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G C VD A+ + +M++++ D + L+NGF ++ +++L V M+ K
Sbjct: 299 GLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWV-MMGKENCH 357
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
++ I L R++EEA+++ L++++ + + + K G + A +
Sbjct: 358 N-VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKI 416
Query: 569 LK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
LK A + + AY + + +GR EA ++++
Sbjct: 417 LKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQ 454
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 139/336 (41%), Gaps = 40/336 (11%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL F GY H+ + ILR L+ + V +VE +K + + D +
Sbjct: 23 PKSALALFDSASRQPGYTHSPHIFLLILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVL 82
Query: 306 KISRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + + K +M +A+ F+ M + KP ++ + LL + N + F +
Sbjct: 83 TVLKAYAKSKMPNEALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAY--F 140
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E++G + Y+ + + K +F EA+ ++ M + +PD +Y VI G+ K+G
Sbjct: 141 ETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDL 200
Query: 425 EDACNVLDEMEENGCIPDIK------------------------------------TWTI 448
A V DEM E G +PD+ T+ +
Sbjct: 201 VSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNV 260
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I G C D +L + +M + + D LI G V+GA ++ EM+++
Sbjct: 261 MINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRS 320
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ T+ L+ A +++E+ L +M K+N
Sbjct: 321 VVVD-VVTYNALLNGFCRAGKIKESFELWVMMGKEN 355
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 15/272 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K + Y+ I+ L++ V + +V +M K G E+ + F + +E+
Sbjct: 423 GGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEE 482
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS----- 374
A+ F M P+V + L+ + R ++ Y + L K
Sbjct: 483 AICFFREMETKGCSPTVVSYNTLINGLCKAE--------RFSDAYSFVKEMLEKDWKPDM 534
Query: 375 -VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y + L + + D A + + + G EPD ++ ++ GLC AG+ EDA +
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M+++ C+P++ T L+ G A E + A + +A M + + D ++ + G S R
Sbjct: 595 MKQSNCLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGR 654
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ L + + K + P T+ L+ +L
Sbjct: 655 ISDGIALFDDAL-KNGILPTSITWYILVRAVL 685
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/432 (23%), Positives = 180/432 (41%), Gaps = 48/432 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + LE + + + V V+K VK + FFRW + Y+H+T TY ++
Sbjct: 73 WGPDAERALEVLMLRVDHWLVREVMKTDVGVNVK-MQFFRWAAKKRNYQHDTSTYMALIH 131
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS---RQFQKFRMMEDAVKLFEFMMDGP 331
L E + W +++EM + + + T +++S R +M+ A+ +F +
Sbjct: 132 CLELVEQYGEMWKMIQEMVRS--PICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARK 189
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD 390
+P+ Q + ++ I I+ V + N+ + G+ +V Y + A KLGR D
Sbjct: 190 CQPTAQAYNSMI--IMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQD 247
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A +++ MK G +P Y+ +I K A ++ +EM C PD+ T+T LI
Sbjct: 248 SAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELI 307
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM------ 504
+G A +D A + +M + D +++ +IN R++ KL EM
Sbjct: 308 RGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCI 367
Query: 505 --------------------------IEKVR---LRPWQATFKTLIEKLLGARRLEEAMN 535
E+++ + P T+ LI+ R+E+AM
Sbjct: 368 PNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM 427
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEYPSSA-AYLQVFESFF 591
LL M ++ +PP P + I G + A E + L SSA Y + +
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 592 NEGRHYEAKDLL 603
GR +A +L
Sbjct: 488 KAGRLDDAINLF 499
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 123/558 (22%), Positives = 217/558 (38%), Gaps = 87/558 (15%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L ++ H V V+ K D FF W K+ ++ ++ Y ++
Sbjct: 73 WGPDAERALEVLMLRVDHWLVREVM-KTDVGVNVKMQFFRWAAKKRNYQHDTSTYMALIH 131
Query: 138 NLVNKDSLKQFWVTLRRM-KEDHCYI---EEETYLSILGVLK------------KAKKAS 181
L + + W ++ M + C + E + +LG K KA+K
Sbjct: 132 CLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQ 191
Query: 182 DLA-ALNQ-----FHDGMVKEI-----AMDNVAKTLVDVVLGSDWDD---KIGKKLEDMK 227
A A N H+G +++ M N D V S K+G++ ++
Sbjct: 192 PTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIR 251
Query: 228 I--ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY-----------KHNTITYNGILR 274
+ E+ +N + K IY + FF+ H + + TY ++R
Sbjct: 252 LLNEMKENGMQPTAK---IYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIR 308
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + + + ++ EM++EG + D + K ++D +KLFE M P
Sbjct: 309 GLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIP 368
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+V + +++++ + + VF + + G S S Y + K R ++A
Sbjct: 369 NVVTYNTIIKALFE-SKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMM 427
Query: 395 MMKAMKNAGFEPDNITYSQVIFGL-------------------C---------------- 419
+++ M GF P Y +I L C
Sbjct: 428 LLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLG 487
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KAGR +DA N+ DEM + GC P++ + L+ G A +D AL KM E D +
Sbjct: 488 KAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDIN 547
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
++++NG + A ++L M + ++P ++ T++ L A EEA L
Sbjct: 548 SYNIILNGLAKTGGPHRAMEMLTNM-KNSTIKPDAVSYNTVLSALSHAGMFEEAA---EL 603
Query: 540 MKKQNYPPFPEPFVQYIS 557
MK+ N F + Y S
Sbjct: 604 MKEMNALGFEYDLITYSS 621
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 82/379 (21%), Positives = 155/379 (40%), Gaps = 50/379 (13%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
+P++ +Y++++ D++ M+ +C + TY ++ L KA + +
Sbjct: 261 MQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDE-- 318
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLG--SDWDDKIGKKLEDMKIELSDNFVLT---VL 239
A + +H+ + D V + LG DD + K E+M + V+T ++
Sbjct: 319 AYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGL-KLFEEMGVSHCIPNVVTYNTII 377
Query: 240 KELRIYPVKALGFFRWVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG- 296
K L + F W + SG + TY+ ++ + + ++EEM ++G
Sbjct: 378 KALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGF 437
Query: 297 ------YEMDIDTYIKISRQ------FQKFR----------------------MMEDAVK 322
Y ID K R FQ+ + ++DA+
Sbjct: 438 PPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAIN 497
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
LF+ M P+V + L+ ++ D L K + G + Y+ I
Sbjct: 498 LFDEMSKLGCTPNVYAYNALMSGLARACMLDEALT--TMRKMQEHGCLPDINSYNIILNG 555
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K G A +M+ MKN+ +PD ++Y+ V+ L AG FE+A ++ EM G D
Sbjct: 556 LAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYD 615
Query: 443 IKTWTILIQGHCAANEVDR 461
+ T++ +++ A +VD+
Sbjct: 616 LITYSSILE---AIGKVDQ 631
>gi|15240032|ref|NP_196258.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171850|sp|Q9FNG8.1|PP366_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g06400, mitochondrial; Flags: Precursor
gi|9758420|dbj|BAB08962.1| unnamed protein product [Arabidopsis thaliana]
gi|332003627|gb|AED91010.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1030
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 173/396 (43%), Gaps = 7/396 (1%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW+ + + LE ++ + V+ VL+ +I L FF WVG+ +GYKHN+ YN +
Sbjct: 627 DWE-RTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V + + ++ EM+++G + DT+ + Q+ + + A++ F+ M D
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 745
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS L+ + ++ R + G + + L ++G +A+
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ ++ GF P + YS I LC+ G+ E+A + L E + D T+ ++ G
Sbjct: 806 SCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
++ +AL M E + LI F +K++ + +M E P
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM-EGESCEPS 923
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLK 570
T+ +I + ++EEA N R M+++ P + + ++I+ EDA + L
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K PS+ + VF EG+H A+ L K
Sbjct: 984 EMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 157/356 (44%), Gaps = 10/356 (2%)
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
+E+ V + VV G D + +LE + V VLK P A+ FF
Sbjct: 118 EEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFN 177
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
WV + G+ H YN +L + ++ +V EM+K G + DI T+ + + K
Sbjct: 178 WVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKA 237
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSL 371
+ + + +FE M ++ ++++RS+ DL L F Y+ + G +
Sbjct: 238 KKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEF-----YKEMMEKGITF 292
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + + K + D + + M ++ + ++ C +G+ ++A ++
Sbjct: 293 GLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
E++ D K + IL++G C AN + AL M + D D+++ ++I+G+L Q
Sbjct: 353 RELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQ 411
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
V+ A + E+I+K P +T+ +++ L ++ E+ NL M + P
Sbjct: 412 NDVSKALEQF-EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 51/400 (12%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML----- 136
+E++LE+LS + E V VL++ P A FFNWV K F +Y+ ML
Sbjct: 142 MEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGE 201
Query: 137 -RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK 195
RNL D L + M+++ C + T+ ++ V KAKK
Sbjct: 202 ARNLDMVDEL------VSEMEKNGCDKDIRTWTILISVYGKAKK---------------- 239
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK--ALGFF 253
+ K L+ + +K+ EL +++ L I AL F+
Sbjct: 240 ------IGKGLL-----------VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+ + E G TY +L +A+ E V ++ ++M + + D + + + F
Sbjct: 283 KEMMEK-GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCV 341
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+++A++L + + + +L++ + N L K L +S
Sbjct: 342 SGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS--- 398
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+VY I + +A + + +K +G P TY++++ L K +FE CN+ +E
Sbjct: 399 NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNE 458
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
M ENG PD T ++ GH N V A F+ M EK
Sbjct: 459 MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG 498
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 168/389 (43%), Gaps = 16/389 (4%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L + I ++ + V VL+ ++L FF W H Y+ T+ Y +L+ LAR +
Sbjct: 65 RTLNKLPISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLSYQPTTLEYEELLKTLARTK 124
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF---EFMMDGPYKPSVQ 337
+ W + +M+ + I +F K +++ AV++F + ++ P V
Sbjct: 125 QFQPMWKIAHQMQT----LSPTVVSSIIEEFGKHGLVDQAVEVFNKAKSALNCPQTIEVY 180
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ L + L+ R+ K G + +K Y + G+ EA+ ++
Sbjct: 181 NSLLFALCEVKYFHGAYALIRRMIRK----GVTPNKQTYSVLVNGWCAAGKMKEAQDFLE 236
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M GF P ++ GL AG E A ++ +M + GC PD++T +++ C A
Sbjct: 237 EMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAG 296
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
E + + + + + ++I + R++ A+++L IE RP+ + +
Sbjct: 297 EAEFCIDIYNDVCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGH-RPFPSLY 355
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALS- 573
+I+ L + ++A MK + +PP + I+ + G DA+ +L ++
Sbjct: 356 APIIKALCRNGQFDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTE 415
Query: 574 VKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ P S + V + N G+H A+ +
Sbjct: 416 LNLTPISRCFDMVTDGLKNCGKHDLARKI 444
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 154/407 (37%), Gaps = 37/407 (9%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
LE L +L +T + V VLR N ++ FFNW ++P++ Y +L+ L
Sbjct: 63 LERTLNKLPISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLSYQPTTLEYEELLKTLAR 122
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ W +M+ + SI+ K H + + + + N
Sbjct: 123 TKQFQPMWKIAHQMQT----LSPTVVSSIIEEFGK-------------HGLVDQAVEVFN 165
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
AK+ ++ IE+ N +L L E++ + R + G
Sbjct: 166 KAKSALNC---------------PQTIEVY-NSLLFALCEVKYFHGAYALIRRMI--RKG 207
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
N TY+ ++ +++ + +EEM ++G+ + + +E A
Sbjct: 208 VTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAK 267
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
++ M P V+ + +L +I + + N LG S + Y +
Sbjct: 268 EMVRKMTKEGCAPDVETLNSMLEAICKAGEAE--FCIDIYNDVCRLGVSPNVGTYKIMIP 325
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A K GR DEA +++ G P Y+ +I LC+ G+F+DA +M+ G P
Sbjct: 326 AACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQFDDAFCFFSDMKVKGHPP 385
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ +T+LI A +M E N + D++ +G
Sbjct: 386 NRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDMVTDGL 432
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 23/353 (6%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRM 316
E G N + YN I+ R D +VE+M++EG DI T+ +IS ++ ++
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 317 MEDAVKLFEFM-MD---GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS-- 370
+ DA ++F M +D G +P+ +L+L+ + GL+ +ES+ +
Sbjct: 269 L-DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-----GLLEDAKTLFESIRENDD 322
Query: 371 -LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S Y+ + L + G+F EAE ++K M + G P +Y+ ++ GLCK G DA
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ M+ NG PD T+ L+ G+C+ +VD A +MM N +A ++L++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
R++ A +LL +M EK T +++ L G+ L++A+ +++ M+
Sbjct: 443 KMGRISEAEELLRKMNEK-GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
YI G V+D+ + P Y + GR EAK+L
Sbjct: 502 NLGNSYI---GLVDDS-----LIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 11/297 (3%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ A +LF+ M + KP+ +L+R D GL + N ES G +K +Y
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL--ELLNAMESFGVLPNKVIY 220
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D++EKM++ M+ G PD +T++ I LCK G+ DA + +ME
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 437 NGCI----PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+ + P+ T+ ++++G C ++ A F + E + A ++ + G +
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +M +K + P ++ L++ L L +A ++ LMK+ P +
Sbjct: 341 KFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 553 VQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + G V+ A L+ + P++ + S + GR EA++LL K
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 13/275 (4%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ TY + K +A LF MM +P ++ + + FR
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK--QGKISSAFR 580
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
V E G S Y+ + L + E +M MK G P+ TY+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ + EDA N+LDEM + P++ ++ LI+ C + D A F + +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG- 699
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ-ATF--KTLIEKLLGARRLEEAMNL 536
L ++ N L+ ++ A E++E V R ++ TF K L+E L LE A +
Sbjct: 700 LYSLMFNELLAAGQLLKA----TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 537 LRLMKKQNY---PPFPEPFVQYISKFGTVEDASEF 568
L M + Y P P + + K G ++A+ F
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 15/258 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T N +L L + + + ++ +M ++GY +D T I ++ A+++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M V + ++ ++ N +GLV + L + ++ Y + L
Sbjct: 490 KGM-------RVHGSA----ALGNLGNSYIGLVDDSLIENNCLPDLIT---YSTLLNGLC 535
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GRF EA+ + M +PD++ Y+ I CK G+ A VL +ME+ GC ++
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI G N++ +M EK + + I ++V A LL EM
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 505 IEKVRLRPWQATFKTLIE 522
++K + P +FK LIE
Sbjct: 656 MQK-NIAPNVFSFKYLIE 672
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 142/338 (42%), Gaps = 26/338 (7%)
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
R F + +E + + +D I+R + +M E+ +L ++ + + L
Sbjct: 21 RIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS 80
Query: 343 LRSISSINN------PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ SI + +N P LV +++ N S +Y+ + + K R + +
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLV---RSRFPE--NKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
K M G P T++ +I LC + + A + DEM E GC P+ T+ IL++G+C A
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR---LRPW 513
D+ L M + + + +++ F + R + + K M+EK+R L P
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK----MVEKMREEGLVPD 251
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-------FVQYISKFGTVEDAS 566
TF + I L ++ +A + M+ Y P P ++ K G +EDA
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 567 EFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+++ + S +Y + G+ EA+ +L
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + TYN ++ L + + +++EMK++G +I TY + + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA L + MM P+V L+ + + PD + V S+ + +Y
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV--PDFDMAQEVFETAVSICGQ-KEGLYS 702
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L G+ +A ++++A+ + GFE Y ++ LCK E A +L +M +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 438 G 438
G
Sbjct: 763 G 763
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I K L + I LS + V VL + + FF W G + +Y+ ILR L R
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ +V++ M EG D++ F + + A++LFE K S +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ LLR + ++ A K +S S Y+ + +KLG +E EK++K
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS---YNIMISGWSKLGEVEEMEKVLKE 280
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M +GF PD ++YS +I GL + GR D+ + D ++ G +PD + +I +A +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
D ++ + +M+++ + + + L++G + ++V+ A ++ EM+ +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/216 (19%), Positives = 94/216 (43%), Gaps = 2/216 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG+ + ++Y+ ++ L R + D + + +K +G D + Y + F R +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
++++ + M+D +P+++ S L+ + I + + + S G + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGL--IKGRKVSDALEIFEEMLSRGVLPTTGLVTS 400
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L G A + + + AG Y ++ L + G+ NV DEM+E+G
Sbjct: 401 FLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESG 460
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
D++ + ++ G C ++ A+L + M K +
Sbjct: 461 YPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGF 496
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 90/217 (41%), Gaps = 15/217 (6%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K +T ++N +LR L V +V KK D +Y + + K +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSCSYNIMISGWSKLGEV 271
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL------GNSL 371
E+ K+ + M++ + P S L+ LG R+ + E GN
Sbjct: 272 EEMEKVLKEMVESGFGPDCLSYSHLIEG--------LGRTGRINDSVEIFDNIKHKGNVP 323
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+VY+ + FDE+ + + M + EP+ TYS+++ GL K + DA +
Sbjct: 324 DANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+EM G +P T ++ C+ A++ + K
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQK 420
>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Glycine max]
Length = 1024
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 156/355 (43%), Gaps = 25/355 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + TY ++ + ++ N +EM ++ ++ TY + + K R + D
Sbjct: 482 NGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFD 541
Query: 320 AVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVAN 362
A KLFE M+ KP+V + C + R I + D+ + F++ +
Sbjct: 542 ANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDD 601
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
N ++ Y + L K R +EA +++ M G EP+ I Y +I G CK G
Sbjct: 602 NDCETPNIIT---YGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTG 658
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ E+A V +M E G P++ T++ LI +D L +KM+E + + +
Sbjct: 659 KLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYT 718
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+I+G + AY+L+++M E+V P T+ +I+ ++E+ + L R M
Sbjct: 719 DMIDGLCKVGKTEEAYRLMLKM-EEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCS 777
Query: 543 QNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNE 593
+ P + + G +++A L + +P ++Y ++ E F E
Sbjct: 778 KGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNRE 832
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 167/386 (43%), Gaps = 31/386 (8%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L + ++ M EG + + + + + K R A KLF
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES----LGNSLSKSVYDGIH 380
+ M+ +P ++ + SI S + +A K S LG L+K
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L G+FD+A +++ M + GF PD+ TYS+VI LC A + E A + +EM++NG +
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+TILI C A + +A F +M+ N + LI+ +L ++V A KL
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK--------------QNYP 546
EM+ +P T+ LI+ A ++++A + M+ N
Sbjct: 546 F-EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDC 604
Query: 547 PFPE-----PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
P V + K VE+A E L +SV P+ Y + + F G+ A+
Sbjct: 605 ETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQ 664
Query: 601 DLLYK------CPHHIRQDSKISLLF 620
++ K CP+ S I+ LF
Sbjct: 665 EVFVKMSERGYCPNLYTYSSLINSLF 690
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 190/434 (43%), Gaps = 34/434 (7%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA F + K PS Y++++ + ++Q M D+C TY S
Sbjct: 470 EKAFLLFEEM-KKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTS 528
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMK 227
++ KA+K D N+ + M+ E + NV L+D + DK + M+
Sbjct: 529 LIHAYLKARKVFDA---NKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQ 585
Query: 228 --IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
IE SD + + + ++ N ITY ++ L + V +
Sbjct: 586 GDIESSD-----------------IDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEA 628
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+++ M G E + Y + F K +E+A ++F M + Y P++ S L+ S
Sbjct: 629 HELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINS 688
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ L LV +V +K L NS + +V Y + L K+G+ +EA ++M M+ G
Sbjct: 689 L--FKEKRLDLVLKVLSKM--LENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVG 744
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P+ ITY+ +I G K G+ E + +M GC P+ T+ +LI C+ +D A
Sbjct: 745 CYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAH 804
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+M + + +I GF + + LL E+ E + P ++ ++ LI+
Sbjct: 805 RLLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESV-PVESLYRILIDN 861
Query: 524 LLGARRLEEAMNLL 537
+ A RLE A+NLL
Sbjct: 862 FIKAGRLEGALNLL 875
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 158/384 (41%), Gaps = 34/384 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + TY+ ++ L V + + EEMKK G + TY + F K +++ A
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
F+ M+ P+V + L+ + VF +E + G+ + Y
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARK-----VFDANKLFEMMLLEGSKPNVVTYT 562
Query: 378 GIHRALTKLGRFDEAEKMMKAMK----------------NAGFEPDNITYSQVIFGLCKA 421
+ K G+ D+A ++ M+ N P+ ITY ++ GLCKA
Sbjct: 563 ALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKA 622
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
R E+A +LD M NGC P+ + LI G C +++ A F KM E+ Y +
Sbjct: 623 NRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTY 682
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
LIN +KR++ K+L +M+E P + +I+ L + EEA L+ M+
Sbjct: 683 SSLINSLFKEKRLDLVLKVLSKMLEN-SCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKME 741
Query: 542 KQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHY 597
+ P + I K G +E E + + K P+ Y + + G
Sbjct: 742 EVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLD 801
Query: 598 EAKDLLYKC-----PHHIRQDSKI 616
EA LL + P HI KI
Sbjct: 802 EAHRLLDEMKQTYWPRHISSYRKI 825
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 172/403 (42%), Gaps = 36/403 (8%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L + LS+ V+ V+ ++ +P + FF W GY H + YN ++ +L +
Sbjct: 91 LRQFRGRLSEPLVVEVMNLVK-HPEFCVEFFLWASRQIGYSHTPVVYNALIELLCCNAVN 149
Query: 283 RD-----FWNVVEEMKKEGYEMDIDTYI-KISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
D F + + +E ++ I K R +E+ +L +F YK S
Sbjct: 150 NDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWNVALEELGRLKDF----GYKASP 205
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ L++ + L F V + + G + +L K GR +A +
Sbjct: 206 TTYNALIQVF--LRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDA---L 260
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
++ F PD + Y++++ GLC+A F++A ++LD M CIP++ T+ IL+ G
Sbjct: 261 SLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGK 320
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
++ R + MM + + ++ + L++ + + + AYKL +MI K +P
Sbjct: 321 GQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMI-KCGCQPGYLL 379
Query: 517 FKTLI------EKLLGARRLE-------EAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE 563
+ I E+L G+ LE E ++L ++ K N F + + G +
Sbjct: 380 YNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNV----SNFARCLCGAGKFD 435
Query: 564 DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
A E + + K + P + Y +V F + E LL++
Sbjct: 436 KAFEIICEMMSKGFVPDDSTYSKVI-GFLCDASKVEKAFLLFE 477
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 129/314 (41%), Gaps = 71/314 (22%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ +Y+ M+ L ++ + + +M+E CY TY +++ K K L
Sbjct: 712 PNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQ--CL 769
Query: 187 NQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
+ D K A + + + L++ + D+ + L++MK + Y
Sbjct: 770 ELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK---------------QTY 814
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
+ + +R + E G+ IT G+L L+ +ESV VE + Y + ID +I
Sbjct: 815 WPRHISSYRKIIE--GFNREFITSIGLLDELSENESVP-----VESL----YRILIDNFI 863
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K R +E A+ L E ISS +P L VANKY
Sbjct: 864 KAGR-------LEGALNLLE-------------------EISS--SPSLA----VANKY- 890
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+Y + +L+ + D+A ++ +M N P+ T+ +I GL + G+++
Sbjct: 891 ---------LYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQ 941
Query: 426 DACNVLDEMEENGC 439
+A + D + + C
Sbjct: 942 EALQLSDSICQMVC 955
>gi|297807861|ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317651|gb|EFH48073.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/390 (23%), Positives = 163/390 (41%), Gaps = 47/390 (12%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L +++ ++ FV VL+ +L FF W + Y ++ Y + + LA H+
Sbjct: 66 RSLNSLRLPVTSEFVFRVLRATSRSANDSLRFFNWARSNPSYTPTSMEYEELAKSLASHK 125
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
W ++++MK ++ +T I Q+ K ++ AV+LF +G K
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELF----NGVPK------- 174
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
+LG + VY+ + AL + F A +++ M
Sbjct: 175 -------------------------TLGCQQTVDVYNALLHALCDVKMFHGAYALIRRMI 209
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +PD TY+ ++ G C AG+ ++A LDEM G P + +LI+G A ++
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLE 269
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE---KVRLRPWQATF 517
A KM + + D + LI +G + +EM K+ L T+
Sbjct: 270 SAKEIVDKMTKGGFVPDILTFNTLIEAISK----SGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSV 574
KTLI + +++EA LL + + PFP P ++ + + G +DA F + V
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 575 KEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
K +P + Y + G+ +A + L
Sbjct: 386 KAHPPNRPVYTMLITMCGRGGKFVDAANYL 415
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 32/398 (8%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E L L +T E V VLR + FFNW + P+S Y + ++L +
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSANDSLRFFNWARSNPSYTPTSMEYEELAKSLASH 124
Query: 143 DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNV 202
+ W L++MK+ I ET + ++++ K + + +G+ K +
Sbjct: 125 KKYESMWKILKQMKDLSLDISGET---LCFIIEQYGKNGHVDQAVELFNGVPKTLG---- 177
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKI-----ELSDNFVLTVLK-ELRIYPVKALGFF--- 253
+ VDV + + L D+K+ L + LK + R Y + G+
Sbjct: 178 CQQTVDVY------NALLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAG 231
Query: 254 ------RWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
++ E S G+ + ++ L + +V++M K G+ DI T+
Sbjct: 232 KMKEAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEIVDKMTKGGFVPDILTFN 291
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K +E ++++ + L+ ++S I D FR+ N
Sbjct: 292 TLIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA--FRLLNNCV 349
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G+ S+Y I + + + G FD+A MK P+ Y+ +I + G+F
Sbjct: 350 EDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFV 409
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
DA N L EM E G +P + + ++ G + + D A+
Sbjct: 410 DAANYLVEMTEMGLVPISRCFDMVTDGLKNSGKHDLAM 447
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 118/495 (23%), Positives = 221/495 (44%), Gaps = 30/495 (6%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P + Y++ L LV + LK + +M + ++ T+ ++ L KA + A
Sbjct: 119 FKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRP-A 177
Query: 185 ALNQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT---- 237
L M++E+A + T ++ G + + L+ K L +LT
Sbjct: 178 IL------MLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSV 231
Query: 238 ------VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
KE R+ +AL F V E G+ + +T+N ++ R +V D ++V+
Sbjct: 232 KVLVNGFCKEGRVE--EALRFVLEVSEE-GFSPDQVTFNSLVNGFCRIGNVNDALDIVDF 288
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G++ D+ TY + K E A+++ + M+ P+ + L+ ++ N
Sbjct: 289 MIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKEN- 347
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
++ +A S G ++ + + L D A +M + MKN G +PD TY
Sbjct: 348 -EIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTY 406
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
S +I LC R ++A +L EME +GC + + LI G C + ++ A F +M
Sbjct: 407 SILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMEL 466
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ + LI+G KRV A +L+ +MI + L+P + T+ +L+ +E
Sbjct: 467 LGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIME-GLKPDKFTYNSLLTYFCRVGDIE 525
Query: 532 EAMNLLRLMKKQNYPP--FP-EPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVF 587
+A ++++ M P F + + + G V+ AS+ L+++ +K + AY V
Sbjct: 526 KAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 585
Query: 588 ESFFNEGRHYEAKDL 602
++ F R E L
Sbjct: 586 QALFMRKRTKEGMRL 600
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 128/287 (44%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K +T YN L L ++ + +M EG +D+ T+ + + K + A
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + E M + KP + L++ I DL ++ + G L+ +
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGF--IEEGDLNGALKMKKQMLGYGCLLTNVSVKVLV 235
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K GR +EA + + + GF PD +T++ ++ G C+ G DA +++D M E G
Sbjct: 236 NGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G C E ++A+ +M+ + + + LI+ + + A L
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDL 355
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ K L P TF TLI+ L ++ + AM + MK + P
Sbjct: 356 ARILVSK-GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKP 401
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 136/320 (42%), Gaps = 36/320 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L + + ++ + +G D+ T+ + + + + A+++F
Sbjct: 332 NTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMF 391
Query: 325 EFMMDGPYKPS----------------VQDCSLLLRSISSINNPDLGLVF---------- 358
E M + KP +++ +LL+ + S +V+
Sbjct: 392 EEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKS 451
Query: 359 -------RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+ ++ E LG S S Y+ + L K R +EA ++M M G +PD TY
Sbjct: 452 RRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ C+ G E A +++ M NGC PDI T+ LI G C A VD A +
Sbjct: 512 NSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQM 571
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL-GARRL 530
K + +I +KR +L EM+EK P T K + L G +
Sbjct: 572 KGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSD-PPDALTHKIVFRGLCNGGGPI 630
Query: 531 EEAMNL-LRLMKKQNYPPFP 549
+EA++ + +++K P FP
Sbjct: 631 QEAIDFTVEMLEKGILPEFP 650
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 41/324 (12%)
Query: 260 SGYKHNTITYNGILRV-LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
S H+ + N L + L + S +++++K G + T+ + + F F +E
Sbjct: 48 SSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIE 107
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ +K+ E + +KP ++ L ++ + + L LV + +K + G L S ++
Sbjct: 108 NLLKILENELG--FKPDTNFYNIALNAL--VEDNKLKLVEMLHSKMVNEGIVLDVSTFNV 163
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ------------------------- 413
+ +AL K + A M++ M N G +PD IT++
Sbjct: 164 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 223
Query: 414 ----------VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
++ G CK GR E+A + E+ E G PD T+ L+ G C V+ AL
Sbjct: 224 CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 283
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
M+EK +D D + LI+G A ++L +MI + P T+ TLI
Sbjct: 284 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILR-ECSPNTVTYNTLISA 342
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP 547
L +E A +L R++ + P
Sbjct: 343 LCKENEIEAATDLARILVSKGLLP 366
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 135/326 (41%), Gaps = 42/326 (12%)
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
V + V E+ +EG+ D T+ + F + + DA+ + +FM++ + P V
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVY---- 299
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
Y+ + + KLG F++A ++++ M
Sbjct: 300 ---------------------------------TYNSLISGMCKLGEFEKAIEILQQMIL 326
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
P+ +TY+ +I LCK E A ++ + G +PD+ T+ LIQG C + D
Sbjct: 327 RECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDI 386
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
A+ F +M K D +LI+ ++R+ A LL EM E + TLI
Sbjct: 387 AMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEM-ESSGCARNAVVYNTLI 445
Query: 522 EKLLGARRLEEAMNL---LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY- 577
+ L +RR+E+A + + L+ + + K VE+AS+ + + ++
Sbjct: 446 DGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLK 505
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P Y + F G +A D++
Sbjct: 506 PDKFTYNSLLTYFCRVGDIEKAGDIV 531
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 113/248 (45%), Gaps = 5/248 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +++TYN ++ L +++ V + ++++M EG + D TY + F + +E A
Sbjct: 468 GVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKA 527
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M +P + L+ + D+ ++ + G L+ Y+ +
Sbjct: 528 GDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVA--SKLLRSVQMKGIVLTPHAYNPVI 585
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR-FEDACNVLDEMEENGC 439
+AL R E ++ + M PD +T+ V GLC G ++A + EM E G
Sbjct: 586 QALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGI 645
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+P+ ++ L +G C+ + D + +MEK ++ + +I GFL ++ N A
Sbjct: 646 LPEFPSFGFLAEGLCSLSMEDTLIELINMVMEKAQMSERE--TSMIRGFLKIRKFNDALA 703
Query: 500 LLVEMIEK 507
L ++++
Sbjct: 704 NLGGILDR 711
>gi|255660948|gb|ACU25643.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 484
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 179/383 (46%), Gaps = 21/383 (5%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +++++VKLF+ M + + +++ L + I + + R NK S G
Sbjct: 88 DSYGKAGIVQESVKLFQKMEELGVERTIKSYDALFKVI--LRRGRYMMAKRYFNKMLSEG 145
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
++ ++ + G+ D A + + MK+ PD ITY+ +I G + + E+
Sbjct: 146 IEPTRHTFNFMIWGFFLSGKVDTANRFFEXMKSREIMPDVITYNTMINGYYRVKKMEEXE 205
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N EM+ P + T+T LI+G+ + + +D AL +M + +A L+ G
Sbjct: 206 NYFMEMKGRNIEPTVVTYTTLIKGYVSVDRIDDALRLVEEMKGFGINPNAITYSTLLPGL 265
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ ++++ A +L EM++K + F LI L+ A ++L++M + + P
Sbjct: 266 CNAEKMSEAQSILKEMVDKYIAPKDNSIFLRLISGQCKVGNLDAAADVLKVMIRLSVPTE 325
Query: 549 PEPF---VQYISKFGTVEDASEFLKALSVKEY---PSS------AAYLQVFESFFNEGRH 596
+ ++ K G + A +FL + K+ P S +AY + E N G+
Sbjct: 326 AGHYGVLIENCCKAGQYDRAVKFLDKVIEKDIILRPQSSLHMEPSAYNPLIEYLCNNGQT 385
Query: 597 YEAKDLLYKCPHHIRQDSKISLL 619
+A+ L +RQ K+ +L
Sbjct: 386 AKAETL-------VRQLMKLGVL 401
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 7/292 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + + YN ++ L ++ V++ V M G D TY + F + +
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVY 376
E A+++ M+ + PS +CS + I + +L F +A K LG + Y
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFM---IDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K RFD+A+++ K M G EP+ +TY+ +I LCK G EDA + D+M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + LI G+C +DRA + M+++ A LI G ++
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461
Query: 497 AYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +L EM E R W TF LI ++++EA L M N P
Sbjct: 462 AMELHREMAE--RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 38/264 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L ++E D + +EM G E + TY + K M+EDA
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M D K +V Y SL N K
Sbjct: 393 LCLFDKMRDKGIKVTVY-------------------------PYNSLINGYCKQ------ 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G D A ++ M G P +YS +I GLC+ G A + EM E G
Sbjct: 422 ------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIA 475
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+T LI G C ++D A F KM++ N + +V+I G+ + A++L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL 524
+M+E + L+P T+++LI L
Sbjct: 536 YDQMVE-MGLKPDNYTYRSLISGL 558
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 107/241 (44%), Gaps = 4/241 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K+ FR + E G K + I Y ++ L++ E++ N ++M +GY + T+ +
Sbjct: 636 KSCVLFREMKEQ-GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVL 694
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + A L + M+ G P+ + L ++ + + A L
Sbjct: 695 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL 754
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ +S ++ + + L K G+ EA +M+ + +GF PD I+YS +I LCK G A
Sbjct: 755 ASIVS---FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKA 811
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM G PD+ + I I+ E D+AL + M+ + D L++G
Sbjct: 812 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871
Query: 488 F 488
Sbjct: 872 I 872
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 13/244 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L + VY RA + D A ++ M++ G + + Y+ +++GLCK R ++A
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V + M G D T+ L+ G C E++ AL M+ + +I+
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ V A+ L ++ + + + P + LI+KL R ++A L + M + P
Sbjct: 313 LRKKELVEEAFSLACKLGD-LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP 371
Query: 548 FPEPF---VQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + + K G +EDA K + V YP Y + + +G A
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRA 427
Query: 600 KDLL 603
+ LL
Sbjct: 428 RGLL 431
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 154/390 (39%), Gaps = 51/390 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +Y+ ++ L R+ + + EM + G + T+ + F K + M++A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------PDLGL------------- 356
+LF+ M+D P+ ++++ + N ++GL
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 357 -------------VFRVANKYESLGN-SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
V + N Y L N SL+ +Y L + GRF E + M
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLY-----GLFREGRFTETYHLWDEMAVR 612
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + D ++++ +++ K E +C + EM+E G PD +T +I + +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L C+ +M+ Y + VLIN + A L EM+ L P + T+ ++
Sbjct: 673 LNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL-PNKFTYNCFLD 731
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKEY-PS 579
+E+A +L M + + ++ + K G +++A + ++ ++ + P
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPD 791
Query: 580 SAAYLQVFESFFNEGRHYEA----KDLLYK 605
+Y + G +A ++LYK
Sbjct: 792 CISYSTIIHELCKMGDINKAFELWNEMLYK 821
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 15/332 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE----HSGYKHNTITYNGILRVLAR 278
L + LS+ VL VL + + FFRW G+ H TITY ++ +L +
Sbjct: 174 LTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGK 233
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ +++EM KEG + +D + + F +++AV +FE M + V+
Sbjct: 234 ARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVES 292
Query: 339 CSLLLRSISSINNPDLGLVFRVANK-YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKM 395
+ LL +++ LG R AN+ ++ + + + + Y + A EA ++
Sbjct: 293 FNCLLVALA---QEGLG---REANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRV 346
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M G +PD + ++ +I GL + R +A + + M+ G P++ T+T+LI+ HC
Sbjct: 347 WNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCK 406
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++D A+ CF +M + D L+ G+ + KR++ LL EM +K P
Sbjct: 407 RGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK-GCPPDGR 465
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ LI+ L ++A + + M K+ P
Sbjct: 466 TYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 497
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 99/457 (21%), Positives = 176/457 (38%), Gaps = 56/457 (12%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ----FRPSSTVYSLMLR 137
LE L LSP L+ V+ VL + + + FF W F ++ Y M+
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI-----LGVLKKAKKASDLAALNQFHDG 192
L + ++ M ++ + ++I G +K A ++ + F DG
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDG 289
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
+ + +L + + +G++ + + D + +LR Y L
Sbjct: 290 VES-----------FNCLLVALAQEGLGREANQVFDRMRDRYA----PDLRSYTALMLA- 333
Query: 253 FRWVGEHS--------------GYKHNTITYN----GILRVLARHESVRDFWNVVEEMKK 294
W + G K + + +N G+LR R E+V+ F E MK
Sbjct: 334 --WCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMF----ELMKA 387
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G ++ TY + R K M+ A++ FE M D +P V + LL + N +
Sbjct: 388 KGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLL--VGYGNAKRM 445
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
V + + G Y+ + + LT D+A ++ K M G EP TY+ +
Sbjct: 446 DRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMM 505
Query: 415 IFGLCKAGR-FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ GR + C V +EM G PD+ ++T+ I GH + A +M++K
Sbjct: 506 MKSYFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKG 565
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
+ N F + G +L E+ +KV+
Sbjct: 566 MKTP----QIDYNKFAADFSKAGKPDILYELAQKVKF 598
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 103/432 (23%), Positives = 180/432 (41%), Gaps = 73/432 (16%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
++ V+K L+ V A +FRWV + H YN L V+AR ++ ++EEM
Sbjct: 103 IVGVMKRLKDVNV-AFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSV 161
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G+ + +++ F K +++A + E M ++P+ + L+ ++S+ N PD
Sbjct: 162 AGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDP 221
Query: 355 GLVF--------------------RVANKYESLGNSLS-----KS--------VYDGIHR 381
L RV + + +LS KS +Y+
Sbjct: 222 MLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCID 281
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K+G+ D A K MK G PD++TY+ +I LCKA R ++A + +E++ N +P
Sbjct: 282 CFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVP 341
Query: 442 DIKTWTILIQGHCAANEVDRA----------------------LLCFAKMM--------- 470
+ + +I G+ +A + D A L C +
Sbjct: 342 CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH 401
Query: 471 -EKNYDADADL--LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
E DA +L ++LI+ + A K+ M E L P T +I++L A
Sbjct: 402 DEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKE-AGLFPNIMTVNIMIDRLCKA 460
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDA-SEFLKALSVKEYPSSAAY 583
++L+EA ++ + + P F I + G V+DA S + K L + P+ Y
Sbjct: 461 QKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVY 520
Query: 584 LQVFESFFNEGR 595
+ ++FF GR
Sbjct: 521 TSLIQNFFKCGR 532
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 126/565 (22%), Positives = 220/565 (38%), Gaps = 23/565 (4%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W ++E L E +V V+++L D A +F WV K Q VY+ L
Sbjct: 83 WGPDVEEALNVFDEMSQPEVIVGVMKRL-KDVNVAFQYFRWVERKTQQAHCPEVYNAFLM 141
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
+ +L L M + + ++ K+ K + + +
Sbjct: 142 VMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRP 201
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-------IELSDNFVLTVLKELRIYPVKAL 250
A + TL+ + ++ D + M+ + L V +E RI AL
Sbjct: 202 AF-SAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDA--AL 258
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+ +S + + + YN + + V W EMK +G D TY +
Sbjct: 259 SLLDEMKSNS-FTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGV 317
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
K R +++AV+LFE + P V + ++ S D + + + + G
Sbjct: 318 LCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEA--YSLLERQKRKGCI 375
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
S Y+ I L + G+ +EA ++ M+ P+ TY+ +I LCKAG E A V
Sbjct: 376 PSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEAALKV 434
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
D M+E G P+I T I+I C A ++D A F + K D+ LI+G
Sbjct: 435 QDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGR 494
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
+ RV+ AY L +M++ ++ P + +LI+ R E+ + + M + P
Sbjct: 495 RGRVDDAYSLYEKMLDSDQI-PNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLM 553
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
++ + K G VE + + + P +Y + G E L Y+
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613
Query: 607 PH---HIRQDSKISLLFGSAKSNKV 628
H+ + +++ G KS KV
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKV 638
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+Y+ ++ L + R+ + + EMK++G +D+ Y + F K ++ A +L E M
Sbjct: 589 SYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEM 648
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+P+V Y + L K+
Sbjct: 649 KTKGLQPTV-------------------------------------VTYGSVVDGLAKID 671
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R DEA + + K+ G + + + YS +I G K GR ++A +L+E+ + G P+ TW
Sbjct: 672 RLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWN 731
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
L+ A E+D A +CF M +A ++ING ++ N A+ EM +K
Sbjct: 732 CLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEM-QK 790
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+P T+ T+I L A + EA L K P
Sbjct: 791 QGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVP 830
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 110/480 (22%), Positives = 202/480 (42%), Gaps = 22/480 (4%)
Query: 78 WSDELENKLEELSPK-LTHESVVYVL---RKLDNDPEKASAFFNWVCDKKQFRPSSTVYS 133
W E K + L P +T+ +++ VL R+LD +A F + D + P Y+
Sbjct: 293 WKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLD----EAVELFEEL-DLNRSVPCVYAYN 347
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM 193
M+ + + + L R K C Y IL L + K + AL + HD M
Sbjct: 348 TMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEE--AL-RIHDEM 404
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE--LSDNFVLTVLKELRIYPVK--- 248
++ A + ++ +L + + K++D E L N + + R+ +
Sbjct: 405 RQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464
Query: 249 -ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + +H ++ T+ ++ L R V D +++ E+M ++ Y +
Sbjct: 465 EACSIFLGL-DHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ F K ED K+++ M+ P + + + + + G K + L
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ Y + L K G E K+ MK G D + Y+ VI G CK+G+ + A
Sbjct: 584 VPDVRS--YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L+EM+ G P + T+ ++ G + +D A + F + D + + LI+G
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F R++ AY +L E+++K L P T+ L++ L+ A ++EA + MK P
Sbjct: 702 FGKVGRIDEAYLILEELMQK-GLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSP 760
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 141/335 (42%), Gaps = 35/335 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + I YN IL L R V + + +EM+++ ++ TY + K +E A
Sbjct: 373 GCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAP-NLTTYNILIDMLCKAGELEAA 431
Query: 321 VKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPD---------- 353
+K+ + M + P++ + CS+ L + +PD
Sbjct: 432 LKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDG 491
Query: 354 LGLVFRVANKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
LG RV + Y L VY + + K GR ++ K+ K M + G PD
Sbjct: 492 LGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPD 551
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ + + + KAG E + +E++ G +PD+++++ILI G A F
Sbjct: 552 LMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFY 611
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M E+ D + +I+GF +V+ AY+LL EM K L+P T+ ++++ L
Sbjct: 612 EMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK-GLQPTVVTYGSVVDGLAKI 670
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
RL+EA L K + I FG V
Sbjct: 671 DRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKV 705
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 131/300 (43%), Gaps = 24/300 (8%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + + YN ++ + V + ++EEMK +G + + TY + K +
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
++A LFE K D ++++ S S I+ G V R+ Y L + K +
Sbjct: 674 DEAYMLFE-----EAKSIGVDLNVVIYS-SLIDG--FGKVGRIDEAYLILEELMQKGLTP 725
Query: 376 ----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ + AL K DEA+ + MKN P+ +TYS +I GLC +F A
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P+ T+T +I G A V A F + D+ + +I G S
Sbjct: 786 QEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSA 845
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKT---LIEKLLGARRLEEAM---NLLRLMKKQNY 545
+ AY + E+ RL+ + KT L++ L A LE+A +LR M K +
Sbjct: 846 NKAMDAYIVF----EETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 901
>gi|255660932|gb|ACU25635.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 484
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 171/367 (46%), Gaps = 14/367 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FFRWV + ++HN T+ I+ +L R + ++ +M K+G E D D ++ +
Sbjct: 28 ALQFFRWVERSNLFQHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVLMI 87
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ +++++VKLF+ M + + +++ L + IS + R NK S G
Sbjct: 88 DSYGNGGIVQESVKLFQKMDELGVERTIKSYDALFKVIS--RRGRYMMAKRYFNKMLSEG 145
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
++ ++ + G+ + A + + MKN PD ITY+ +I G + + E+A
Sbjct: 146 IEPTRHTFNIMIWGFFLSGKVETANRFFEDMKNREITPDVITYNTMINGYYRVKKMEEAE 205
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
EM+ P + T+T LI+G+ + ++VD AL +M A+A L+ G
Sbjct: 206 KYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGYGIKANAITYSTLLPGL 265
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ ++++ A +L EM++K + F LI A L+ A ++L+ M + + P
Sbjct: 266 CNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISGQCKAGNLDAAADVLKAMIRLSVPTE 325
Query: 549 PEPF---VQYISKFGTVEDASEFLKALSVKE---------YPSSAAYLQVFESFFNEGRH 596
+ ++ K G + A + L L K+ + S+AY + N G+
Sbjct: 326 AGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQSTLHMESSAYNPLIGYLCNNGQT 385
Query: 597 YEAKDLL 603
+A+ L+
Sbjct: 386 AKAEALV 392
>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 108/488 (22%), Positives = 212/488 (43%), Gaps = 37/488 (7%)
Query: 90 SPKLTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
S LTH+ + V+ L ++ A +F W +FR +Y + L+ +L++
Sbjct: 93 SESLTHDQAITVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLER 152
Query: 148 FWVTLR----------RMKEDHCYIEEETYLSILGVLKKAKKASDLA---ALNQFHDGMV 194
++ ++KE + E ++ + D+A L + + M
Sbjct: 153 ANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMF 212
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-----IE---LSDNFVLTVLKEL---R 243
E+ V+ V L +G+ LE K +E + DN T++ + +
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQK 272
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
Y + +G+F W G N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 273 GYVNRVVGYF-WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYT 331
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISS---INNPDLGLVFR 359
+ + K E A +LF + + YKP+V + ++ +N ++ L
Sbjct: 332 HTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLL--- 388
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + G + + Y + K+G F A ++M M GF P+ TY+ +I GLC
Sbjct: 389 --SRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K G ++A +L+++ +G D T+TIL+ HC + +R+L+ F KM++ + D
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
LI+ F QK++ + +L E + + L P + T+ ++I A+ L +
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVS-LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565
Query: 540 MKKQNYPP 547
M P
Sbjct: 566 MSNHGCAP 573
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 116/280 (41%), Gaps = 38/280 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN I+ L + S+ + + ++ ++ G + D TY + + +
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M+ + P + + L+ + R+ + SLG +K Y +
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISXFC--RQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G A K+ + M N G PD+ITY +I GLCK + +DA N+ D M + G
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 441 PD--------------------------------IKTWTILIQGHCAANEVDRALLCFAK 468
P I+T L++ C+ ++D A L F K
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHK 667
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+++K + + V + GF+++ + Y L+ E+ E++
Sbjct: 668 LLDKEPNVN----RVTLLGFMNKCYESNKYGLVSELSERI 703
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ G NT TY ++ H V +F + +++ M KEG+ +I TY I K
Sbjct: 392 QEQGLVPNTNTYTTLID---GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK 448
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+++A +L + + ++L+ + + LVF NK +G +
Sbjct: 449 GSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF--FNKMLKVGFTPDIH 506
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + + + E+E++ + + G P TY+ +I G C+ G A + M
Sbjct: 507 SYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+GC PD T+ LI G C +++D A + MM+K L + +
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ A + +++++ R W T TL+ KL +L+ A
Sbjct: 627 STA----INVLDRLEKRQWIRTVNTLVRKLCSEGKLDMA 661
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 168/375 (44%), Gaps = 13/375 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L +LS N V VLK + A FF W G++H+ ++++ ++ +L +
Sbjct: 68 LNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILGSCKQF 127
Query: 283 RDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
W+ + EM++ YE++ + + I R + + + + A++ F M + KP++ D
Sbjct: 128 AILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTIHDLDK 187
Query: 342 LLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
LL + + L + N++ SL+ Y + ++G ++A + +AM
Sbjct: 188 LLFILCKRKHVKQAQQLFHQAKNRF-----SLTAKTYSILISGWGEIGDSEKACDLFQAM 242
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
G D + Y+ ++ LCK GR ++A N+ +M PD T++I I +C A++V
Sbjct: 243 LEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYSIFIHSYCDADDV 302
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
A KM N + + +I + V AY+LL EMI + ++P ++
Sbjct: 303 QSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDEMISR-GVKPDTWSYNA 361
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE 576
+ + A+ L+ M+K P + ++ + + G + +E + + K+
Sbjct: 362 IQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKK 421
Query: 577 -YPSSAAYLQVFESF 590
YPS + Y + F
Sbjct: 422 FYPSVSTYSVMIHGF 436
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 185/452 (40%), Gaps = 46/452 (10%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
+LE L S +L+ V VL++ N A FF W F+ S + +++ L
Sbjct: 63 DLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPGFQHSVMSFHILVEILG 122
Query: 141 NKDSLKQFWVTLRRMKEDHCY-IEEETYLSILGVLKKAK-KASDLAALNQFHDGMVKEIA 198
+ W L M+E H Y I E + I +A + + N+ + VK
Sbjct: 123 SCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGAIRSFNRMDEFGVKPTI 182
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
D +D +L K K+ + + + + F LT + Y + G+ GE
Sbjct: 183 HD------LDKLLFILCKRKHVKQAQQLFHQAKNRFSLTA----KTYSILISGW----GE 228
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ E D + + M ++G +D+ Y + + K ++
Sbjct: 229 -----------------IGDSEKACDLF---QAMLEQGCPVDLLAYNNLLQALCKGGRVD 268
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK---YESLGNSLSKSV 375
+A +F M+ +P S+ + S + D+ FRV +K Y L N +
Sbjct: 269 EAKNIFHDMLSKRVEPDAFTYSIFIHSYCDAD--DVQSAFRVLDKMRRYNLLPNVFT--- 323
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ I + L K +EA +++ M + G +PD +Y+ + C A ++ ME
Sbjct: 324 YNCIIKQLCKNEHVEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRME 383
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK-RV 494
++ C+PD T+ ++++ D+ + M++K + V+I+GF +K ++
Sbjct: 384 KDICLPDRHTYNMVLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKL 443
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
A K MI++ + P+ T + L +LLG
Sbjct: 444 EEACKYFEMMIDE-GIPPYVTTVEMLRNRLLG 474
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 161/356 (45%), Gaps = 8/356 (2%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
I +S N V +L + ALG FRW GY+H Y+ ++ +L + + V
Sbjct: 74 IPMSQNLVDVLLHRFKDDWKSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRA 133
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++EEM+ +G + + T K R+ EDAV++F+ + + + + + +LLL ++
Sbjct: 134 LMEEMR-QGNLVRLSTVAKAMRRLAGAGEWEDAVRVFDDLGNFELEKNTESMNLLLDTLC 192
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ + K N+ + +++ IH K R DEAE ++ MK G P
Sbjct: 193 KERKVEQARAIFLELKPHISPNTHTFNIF--IH-GWCKANRVDEAEWTIQEMKGHGCRPC 249
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+YS +I C+ F +LD+M+ GC P++ T+T ++ + + AL
Sbjct: 250 VISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAE 309
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M D + LI+ ++ A ++ + K + P +T+ ++I
Sbjct: 310 RMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHH 369
Query: 528 RRLEEAMNLLRLMKKQNY--PPFPE--PFVQYISKFGTVEDASEFLKALSVKEYPS 579
+ ++A+NLLR ++ + P P ++ K G ++ S FL + K + S
Sbjct: 370 SQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLS 425
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/390 (21%), Positives = 158/390 (40%), Gaps = 60/390 (15%)
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
K +L F R+ +H + + ILG LK+ K A + + G + + +
Sbjct: 93 KSALGLFRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMR--ALMEEMRQGNL--VRLST 148
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDM-KIELSDN------FVLTVLKELRIYPVKALGFFR 254
VAK + + +W+D + + +D+ EL N + T+ KE ++ +A+ F
Sbjct: 149 VAKAMRRLAGAGEWEDAV-RVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAI--FL 205
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ H NT T+N + + V + ++EMK G + +Y I + + +
Sbjct: 206 ELKPH--ISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQ 263
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+L + M P+V + ++ S++ + + L ++A + S+G
Sbjct: 264 SNFRKVYELLDDMQAQGCAPNVVTYTTIMCSLTKVEQFEEAL--QIAERMRSVGCKPDTL 321
Query: 375 VYDGIHRALTKLGRFDEAEKMMKA-MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ + L + G+ EA ++ + M G P+ TY+ +I C + + A N+L E
Sbjct: 322 FYNALIHTLGRAGQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLRE 381
Query: 434 MEENG-CIPDIKTW------------------------------------TILIQGHCAA 456
+E + C PDI+T+ T+LI G C A
Sbjct: 382 IENSTFCKPDIQTYYPVLKSCFKTGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRA 441
Query: 457 NEVDRALLCFAKMMEK----NYDADADLLD 482
N+ + F +M+ K Y A LLD
Sbjct: 442 NKCEWGYNLFEEMVGKAITPRYKTCALLLD 471
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 159/374 (42%), Gaps = 10/374 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K NT TY ++ L + + ++ EM G + DI TY + + K + ME A +
Sbjct: 369 KLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYE 428
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L + + C ++ + DL + + S G + +Y I +
Sbjct: 429 LLIEIKKENLTANAYMCGAIVNGLCHCG--DLTRANELFQEMISWGLKPNIVIYTTIVKG 486
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K GRF+EA K++ MK+ G PD Y+ VI G CKAG+ E+ + L EM G P+
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ I G+C A E+ A F +M++ + + LI+G+ A+
Sbjct: 547 VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFR 606
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KF 559
M+++ L P T LI L +L+EAM + + + P + IS K
Sbjct: 607 CMLDQGVL-PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKE 665
Query: 560 GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI-- 616
G ++ A E + K P+ Y + G +A++L P + +
Sbjct: 666 GDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725
Query: 617 -SLLFGSAKSNKVT 629
+++ G KS +T
Sbjct: 726 STIIAGYCKSANLT 739
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/414 (25%), Positives = 184/414 (44%), Gaps = 35/414 (8%)
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL-GFFRWVGE 258
DN K + ++ +W I + + +L+ + V V+K+ ++ K L GFF WV
Sbjct: 42 DNTVKEITSLLKQKNWQFLI--ESSPLPNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNS 99
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEM--KKEGYEMDIDTYIKISRQFQKFRM 316
+ + N T++ + +L + NV+E M + + +D+ IK ++
Sbjct: 100 RTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEING-SS 158
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+V +FE ++D K + ++ + + N +GL + NSLSK +
Sbjct: 159 SSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGL---------ACCNSLSKDLL 209
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
G R + K+ K M A PD TY+ +I C+ G+ E+ +VL +MEE
Sbjct: 210 KG--------NRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEE 260
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GCIP++ T++++I G C A +VD AL M K D + LI+GF QKR
Sbjct: 261 KGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTE 320
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLL------GARRLEEAMNLLRLMKKQNYPPFPE 550
+L EM + L+P + LI + GA +++E M R +K + +
Sbjct: 321 GKSMLDEMY-TMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEM-FARKIKLNTFTYY-- 376
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G +E A + +++ P Y + E ++ +A +LL
Sbjct: 377 ALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELL 430
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 140/316 (44%), Gaps = 8/316 (2%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M +G D+ T+ + K +++A+ +F ++D P V + L+ ++
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCK--E 665
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
DL F + + G + + Y+ + L KLG +A ++ + G +++TY
Sbjct: 666 GDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
S +I G CK+ +A + M+ G PD + LI G C A ++AL F M+E
Sbjct: 726 STIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ A + LI+GF ++ AY+L+ +M++ + P T+ LIE ++
Sbjct: 786 EGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDN-HITPNHVTYTILIEYHCTVGNIK 843
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVF 587
EA L M+K+N P + + + + SE F + ++ P A+ +
Sbjct: 844 EAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMV 903
Query: 588 ESFFNEGRHYEAKDLL 603
++ EG +A L+
Sbjct: 904 DAHLKEGNWIKALKLV 919
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 149/360 (41%), Gaps = 12/360 (3%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+K LG + G + YN ++ + + + + + EM +G + ++ TY
Sbjct: 497 IKILGVMK----DQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGA 552
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV-FRVANKYE 365
+ + M+ A + F M+D P+ C+ L+ N FR
Sbjct: 553 FIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQG 612
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
L + + SV IH L+K G+ EA + + + G PD TY+ +I LCK G +
Sbjct: 613 VLPDVQTHSVL--IH-GLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A + D+M + G P+I T+ LI G C E+ +A F + EK ++ +I
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTII 729
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G+ + A++L M + V + P + LI+ A E+A++L M ++
Sbjct: 730 AGYCKSANLTEAFQLFHGM-KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI 788
Query: 546 PPFP--EPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P + K G + +A + ++ + P+ Y + E G EA+ L
Sbjct: 789 ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQL 848
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 108/542 (19%), Positives = 211/542 (38%), Gaps = 40/542 (7%)
Query: 91 PKLTHESVVYVLRKLDN--DPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
P + VV+++ K + DP++ FFNWV + F + + +S++ L N
Sbjct: 67 PNKLNPDVVFLVIKQNQVIDPKRLHGFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNA 126
Query: 149 WVTLRRM---KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH--------DGMVKEI 197
L RM + H I + SI+ K+ +S +++ F G + E
Sbjct: 127 ANVLERMIDTRNPHVKILD----SIIKCYKEINGSSSSSSVVVFEILIDIYRKKGFLNEA 182
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKK-LEDMKIEL-------------SDNFVLTVL--KE 241
+ + ++G + + K L+ ++EL D + T L
Sbjct: 183 VSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLGAIVPDVYTYTNLINAY 242
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
R+ V+ + E G N +TY+ ++ L R V + + M +G D
Sbjct: 243 CRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDN 302
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
Y + F + + + + + M KP + L+ + D+G F+V
Sbjct: 303 YIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGF--VKQSDIGGAFQVK 360
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ + L+ Y + L K+G ++AE + M G +PD TY+ +I G K
Sbjct: 361 EEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKV 420
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
E A +L E+++ + ++ G C ++ RA F +M+ + +
Sbjct: 421 QNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIY 480
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++ G + + R A K+L M ++ L P + T+I A ++EE + L M
Sbjct: 481 TTIVKGLVKEGRFEEAIKILGVMKDQ-GLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMI 539
Query: 542 KQNYPPFPEPFVQYISKF---GTVEDAS-EFLKALSVKEYPSSAAYLQVFESFFNEGRHY 597
+ P + +I + G ++ A F++ L P+ + + + +G
Sbjct: 540 AKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTT 599
Query: 598 EA 599
+A
Sbjct: 600 KA 601
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 125/285 (43%), Gaps = 6/285 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +TYN ++ L + + + + + ++G + TY I + K + +A
Sbjct: 682 GINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+LF M + G S C+L+ N + L + E + S ++ +
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALI-DGCCKAGNTEKALSLFLGMVEEGIA---STPAFNAL 797
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
KLG+ EA ++++ M + P+++TY+ +I C G ++A + EM++
Sbjct: 798 IDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNV 857
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+P++ T+T L+ G+ F +M+ + D V+++ L + A K
Sbjct: 858 MPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALK 917
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L+ +M+ + + + + LI+ L L E + +L ++KQ
Sbjct: 918 LVDDMLSE-GVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQG 961
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 173/444 (38%), Gaps = 55/444 (12%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D + KA A F + D+ P +S+++ L L++ + + +
Sbjct: 595 DGNTTKAFAKFRCMLDQGVL-PDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVF 653
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
TY S++ L K DL A + HD M K+ N+ T ++ G
Sbjct: 654 TYTSLISNLCKE---GDLKAAFELHDDMCKKGINPNIV-TYNALING------------- 696
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
L L E+ KA F + E G N++TY+ I+ + ++ +
Sbjct: 697 ----------LCKLGEI----AKARELFDGIPE-KGLARNSVTYSTIIAGYCKSANLTEA 741
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ + MK G D Y + K E A+ LF M++ + S
Sbjct: 742 FQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEG-----------IAS 790
Query: 346 ISSINNPDLGLVFRVANKYES-------LGNSLSKS--VYDGIHRALTKLGRFDEAEKMM 396
+ N G F++ E+ + N ++ + Y + +G EAE++
Sbjct: 791 TPAFNALIDGF-FKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLF 849
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M+ P+ +TY+ ++ G + GR + ++ DEM G PD W++++ H
Sbjct: 850 MEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKE 909
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+AL M+ + + +L +LI+ ++ K+L E +EK + AT
Sbjct: 910 GNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDE-VEKQGSKLSLAT 968
Query: 517 FKTLIEKLLGARRLEEAMNLLRLM 540
TL+ A R +EA+ +L M
Sbjct: 969 CGTLVCCFHRAGRTDEALRVLESM 992
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 98/239 (41%), Gaps = 13/239 (5%)
Query: 270 NGILRVLARHESVRDFWNVVEE--MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+G + +++ F +VEE + ID + K+ + + ++++ED M
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVED-------M 817
Query: 328 MDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+D P+ ++L+ ++ N + +F K + N L+ Y + ++
Sbjct: 818 VDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLT---YTSLLHGYNRI 874
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR E + M G +PD++ +S ++ K G + A ++D+M G +
Sbjct: 875 GRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLY 934
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
TILI C N + L ++ ++ L+ F R + A ++L M+
Sbjct: 935 TILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 143/347 (41%), Gaps = 41/347 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G N ITY+ ++ L + + +++EM + G++ D+ Y + K R ++
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A++L + M+ P+V + L+ D FR+ G Y+
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR--AFRLIQVMSERGCPPDVINYNT 281
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR------FEDACNVLD 432
+ L + R D+A+ ++K M A PD ITYS +I GLCK R E AC +L+
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M++ GC P+ T+ ++I+G C A + +AL +M++ D ++I
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
++ AYK+ M E+ +P + LI+ L
Sbjct: 402 DLDAAYKIFGMMSER-ECKPNPVAYAALIDGL---------------------------- 432
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
SK G V+ A + + P A Y V + GR EA
Sbjct: 433 ----SKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEA 475
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR +EA ++ ++M + P+ +TY+ VI GLCK G+ + A +LD M E GC
Sbjct: 109 ALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCC 168
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+++L++G C A D+ +M + + D + + L+NG +R++ A +
Sbjct: 169 PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE- 227
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
LV+++ + P T+ +L+E +++++ A L+++M ++ PP + I+
Sbjct: 228 LVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLC 287
Query: 560 --GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGR 595
++DA LK + + + P Y + + + R
Sbjct: 288 RDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 133/295 (45%), Gaps = 12/295 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +NG+++ L + D + + DI T+ + K +E+A
Sbjct: 60 GIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
++FE M P+V + ++ + D + + + N+ N ++ SV
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV--- 176
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K GR D+ +++ M GF+PD I Y+ ++ GLCK+ R ++A ++ M +G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+ L++ C + +VDRA M E+ D + +I G R++ A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLLRLMKKQNYPP 547
LL +M+ R P T+ T+I+ L R LE A +L +MK+ PP
Sbjct: 297 ALLKQMV-AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG +TYN ++ + R + V + +++ M + G D+ Y + + ++
Sbjct: 234 RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD 293
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA L + M+ P V S ++ + +RV +
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKD--------WRVDADW-------------- 331
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + A ++++ MK G P+ TY+ VI GLC+A + + A +L M ++
Sbjct: 332 ---------KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE 382
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+PD+ +++++I C ++++D A F M E+ + LI+G V+ A
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPE--PFVQY 555
++ M+E RP AT+ ++++ L G R+EEA+ ++ ++ K+ +P ++
Sbjct: 443 RVFELMVES--FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 556 ISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
+ + VE+A E +A+ K + A + V+ NE
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGF---AMEVGVYNVLVNE 535
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 170/392 (43%), Gaps = 43/392 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ F+P +Y+ +L L L + ++ M CY TY S++ + ++K+
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV- 257
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D + I + + DV+ +++ I D +++ +L +
Sbjct: 258 ---------DRAFRLIQVMSERGCPPDVI---NYNTVIAGLCRDARLD-DAQALLKQMVA 304
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN------VVEEMKKE 295
R P + ITY+ I+ L + V W ++E MK+
Sbjct: 305 ARCVP------------------DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + TY + + R + A+ L M+D P + S+++ S+ ++ D
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 356 L-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+F + ++ E N ++ Y + L+K G D+A ++ + M + F P TY+ V
Sbjct: 407 YKIFGMMSERECKPNPVA---YAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSV 462
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLC GR E+A +++ M C PD ++ LI+G C + V+ A F + K +
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ + +VL+N +KR++ A+ + ++IE
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 41/268 (15%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA-------- 427
Y + L K G+ D+A +++ M++ G P ++ VI GLCKAGRF DA
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVA 92
Query: 428 ---C-------NVL-DEMEENG-----------------CIPDIKTWTILIQGHCAANEV 459
C N+L D + ++G C+P++ T+T +I G C ++
Sbjct: 93 GTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKL 152
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
DRA+ M E + VL+ G R + + LL EM + +P + T
Sbjct: 153 DRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRR-GFQPDVIMYNT 211
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQN-YPPFP--EPFVQYISKFGTVEDASEFLKALSVKE 576
L+ L +RRL+EA+ L++LM + YP ++ + V+ A ++ +S +
Sbjct: 212 LLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERG 271
Query: 577 YPSSAA-YLQVFESFFNEGRHYEAKDLL 603
P Y V + R +A+ LL
Sbjct: 272 CPPDVINYNTVIAGLCRDARLDDAQALL 299
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + G+ +A ++ + + P+ TY +I GLCKAG+ + A +LDEM + G P
Sbjct: 8 LVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +I+G C A AL F + D ++L++ + RV A+++
Sbjct: 65 VAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
M + P T+ T+I L +L+ A+ LL LM + P + V+ + K
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Query: 560 GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G + L+ ++ + + P Y + R EA +L+
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1113
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 169/391 (43%), Gaps = 36/391 (9%)
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
K LS V+ VL + + P A +F V E H T T N +L +L H V D
Sbjct: 86 KNALSSKEVMAVLNSI-LDPTDAFSYFNSVAEMPFVVHTTETCNHMLEILRIHRRVGDMV 144
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQ-----------FQKFRMMEDAVKLFEFMMDGPYKPS 335
V M+ + + D++TY+ I + F +M E L + +G
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIH-- 202
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEA 392
LLL+S GL Y + G S + + A K +
Sbjct: 203 -----LLLQS---------GLCREALEMYRRMVLEGLKPSLKTFSALMVATGKRRDTETV 248
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ +++ M++ G +P+ TY+ I L +AGR ++AC ++ ME++GC PD+ T+T+LI
Sbjct: 249 KSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDA 308
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C A ++D A+ F KM ++ D +++ F + + EM E P
Sbjct: 309 LCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEM-EADGYAP 367
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL 569
TF L+ L A ++EA +LL +M+KQ P + IS + ++DA +
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427
Query: 570 KAL-SVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ ++ P++ Y+ + + GR +A
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKA 458
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 152/349 (43%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N TY +RVL R + + +++ M+ +G D+ TY + +
Sbjct: 256 ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKL 315
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DA++LF M +KP +L S DLG V ++ E+ G + +
Sbjct: 316 DDAMELFVKMKASSHKPDRVTYITMLDKFSDCG--DLGRVKEFWSEMEADGYAPDVITFT 373
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K G DEA ++ M+ G P+ TY+ +I GL + R +DA ++ + ME
Sbjct: 374 ILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETL 433
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P T+ + I + + D+AL F KM + + + + R+ A
Sbjct: 434 GVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREA 493
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQ 554
K++ ++ L P T+ +++ A +++EA+ LL M + P +
Sbjct: 494 -KVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLIN 552
Query: 555 YISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G V++A F + +K P+ Y + EG+ A +L
Sbjct: 553 TLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMEL 601
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 113/513 (22%), Positives = 208/513 (40%), Gaps = 54/513 (10%)
Query: 43 ASNQSHTSQFHINTCQKIFFSTSPNSSLELILA---CDWSDELENK--LEELSPKLTHES 97
A + + FH+N + S N + L+L C + E+ + LE L P L S
Sbjct: 181 AFGKMREAGFHLN-------AYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTFS 233
Query: 98 VVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
+ V D E + + + +P+ Y++ +R L + + ++RM++
Sbjct: 234 ALMVATGKRRDTETVKSLLEEM-ESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD 217
D C + TY ++ L A K +D+ + V + S D
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGK-------------------LDDAMELFVKMKASSHKPD 333
Query: 218 KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA 277
++ M + SD L +KE F E GY + IT+ ++ L
Sbjct: 334 RV--TYITMLDKFSDCGDLGRVKE-----------FWSEMEADGYAPDVITFTILVNALC 380
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+ ++ + +++++ M+K+G ++ TY + + ++DA+ LF M P+
Sbjct: 381 KAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAY 440
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSL---SKSVYDGIHRALTKLGRFDEAEK 394
L + D L K + ++ + S+Y +L ++GR EA+
Sbjct: 441 TYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLY-----SLAEMGRLREAKV 495
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ +K+ G PD++TY+ ++ KAG+ ++A +L +M EN C PDI LI
Sbjct: 496 IFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLY 555
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
A VD A F ++ + + LI G + +V A +L M P
Sbjct: 556 KAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGN-GCPPNT 614
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
TF T+++ L ++ A+ +L M N P
Sbjct: 615 ITFNTILDCLCKNDEVDLALKMLYKMTTMNCMP 647
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 112/455 (24%), Positives = 190/455 (41%), Gaps = 54/455 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P++ ++ +L L D + L +M +C + T+ +I+ L K+ SD A+
Sbjct: 612 PNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD--AI 669
Query: 187 NQFHD-----------------GMVKEIAMDNVAKTLVDVV--LGSD-----WDDKIGKK 222
FH G+VK M++ K D V LG W+D +G
Sbjct: 670 WLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGI 729
Query: 223 LEDMKIELSDNF------------------VLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
L E + F ++ VL + + V F R+ E G K
Sbjct: 730 LTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKE-LGVKP 788
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+YN ++ + WN+ EMK G D+ TY + K + + +L+
Sbjct: 789 TLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELY 848
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKS--VYDGIHR 381
E M+ KP+ ++++ ++ N+ D L +F Y+ + S + Y +
Sbjct: 849 EQMICSSCKPNTITHNIIIANLVKSNSLDKALDLF-----YDLVSGDFSPTPCTYGPLLD 903
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K GR +EA+++ + M + G P+N Y+ +I G K G AC + M G P
Sbjct: 904 GLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRP 963
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+K++T L+ C A VD AL F K+ + D+ +++I+G R+ A L
Sbjct: 964 DLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLY 1023
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
EM + + P T+ +LI L A +E+A L
Sbjct: 1024 DEM-QSRGINPDLFTYNSLILNLGVAGMVEQAGKL 1057
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 112/261 (42%), Gaps = 3/261 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
S K NTIT+N I+ L + S+ ++ ++ + TY + K +E+
Sbjct: 854 SSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEE 913
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A +LFE M+D +P+ ++L+ D+ + + G Y +
Sbjct: 914 AKELFEEMVDYGCRPNNAIYNILINGFGKTG--DVNTACELFKRMVREGIRPDLKSYTSL 971
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR D+A + +K G D+I Y+ +I GL ++ R E+A + DEM+ G
Sbjct: 972 VGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGI 1031
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ LI A V++A + ++ + + + LI G+ + AY
Sbjct: 1032 NPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYA 1091
Query: 500 LLVEMIEKVRLRPWQATFKTL 520
+ M+ P TF L
Sbjct: 1092 VYKRMMVG-GCSPNTGTFAQL 1111
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 109/528 (20%), Positives = 206/528 (39%), Gaps = 70/528 (13%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ P+ + L +L L++ V R+K + + TY ++ KA + +
Sbjct: 468 RGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDE 527
Query: 183 LAAL------NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK---KLEDMKIELS-- 231
L NQ ++ V +L++ + + D+ K +L+DMK+ +
Sbjct: 528 AIELLSDMSENQCEPDII-------VINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVV 580
Query: 232 --DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ + + KE ++ L F G +G NTIT+N IL L +++ V ++
Sbjct: 581 TYNTLIAGLGKEGQVQRAMEL-FASMTG--NGCPPNTITFNTILDCLCKNDEVDLALKML 637
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+M D+ T+ I + + DA+ LF M V C+LL +
Sbjct: 638 YKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLL---PGVV 694
Query: 350 NNPDLGLVFRVANKY--------------ESLGNSLSK---------------------- 373
N + F++A + + +G L++
Sbjct: 695 KNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDG 754
Query: 374 SVYDGIHRALTKLGRFDEAEKM-MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV I + L K + A+ + ++ K G +P +Y+ +I G E A N+
Sbjct: 755 SVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFT 814
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM+ GC PD+ T+ +L+ H + +++ + +M+ + + +++I +
Sbjct: 815 EMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSN 874
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
++ A L +++ P T+ L++ LL + RLEEA L M P +
Sbjct: 875 SLDKALDLFYDLVSG-DFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIY 933
Query: 553 VQYISKFGTVED---ASEFLKALSVKE--YPSSAAYLQVFESFFNEGR 595
I+ FG D A E K + V+E P +Y + GR
Sbjct: 934 NILINGFGKTGDVNTACELFKRM-VREGIRPDLKSYTSLVGCLCEAGR 980
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 135/349 (38%), Gaps = 49/349 (14%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P+ Y+ ++ + + + W MK C + TY +L K+ K ++L
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846
Query: 186 L----------------NQFHDGMVKEIAMDNVAKTLVDVVLG--SDWDDKIGKKLEDMK 227
L N +VK ++D D+V G S G L+ +
Sbjct: 847 LYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGL- 905
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
LK R+ K L F + ++ G + N YN ++ + V
Sbjct: 906 -----------LKSGRLEEAKEL--FEEMVDY-GCRPNNAIYNILINGFGKTGDVNTACE 951
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ + M +EG D+ +Y + + ++DA+ FE ++ L L SI+
Sbjct: 952 LFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFE---------KLKQTGLYLDSIA 1002
Query: 348 -SINNPDLGLVFRVA------NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
++ LG R+ ++ +S G + Y+ + L G ++A K+ + ++
Sbjct: 1003 YNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQ 1062
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
G EP+ TY+ +I G +G + A V M GC P+ T+ L
Sbjct: 1063 FIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111
>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
Length = 625
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 204/471 (43%), Gaps = 30/471 (6%)
Query: 150 VTLRRMKEDHCYIEEETYLSILGVL---KKAKKASDLAALNQFHDGMVKEIAMDNVA-KT 205
+ LRRM E C + +Y +L L K +++A DL + H G +D VA T
Sbjct: 157 IVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKG---RCPLDVVAYTT 213
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+++ +L DK L D ++ ++ + +++ L + + F R V
Sbjct: 214 VINGLLREGQLDK-AYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMV-- 270
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + I Y ++ ++ + ++M + G E D+ TY + K
Sbjct: 271 KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKST 330
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSV 375
+A K+F+ ++ +KP LL ++ G + + + + + G L +
Sbjct: 331 EARKIFDSLVKRGHKPDSTTYGTLLHGYAT-----EGALVEMHDLLDLMMKKGMQLGHHI 385
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ I A K + DEA + M+ G PD + Y V+ LC AGR +DA + + ++
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P+I +T LI G C ++ D+ +M+++ D + ++ + RV
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVI 505
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A K L +++ ++ + P T+ TLI+ +++EAM LL +M P +
Sbjct: 506 EA-KNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTI 564
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
I+ + G +ED L+ + K P Y + + F GR AK+L
Sbjct: 565 INGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 615
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 102/238 (42%), Gaps = 2/238 (0%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N I+ A+H V + V M+++G DI Y + ++DA+ F +
Sbjct: 386 FNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLK 445
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P++ + L+ + + + D V +A + G L ++ I L K GR
Sbjct: 446 SEGLAPNIVVFTTLIHGLCTCDKWDK--VEELAFEMIDRGICLDTIFFNAIMGNLCKKGR 503
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
EA+ + M G EP+ TY+ +I G C G+ ++A +L M NG P T+
Sbjct: 504 VIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNT 563
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I G+ ++ L +M K + ++L+ G R A +L + MI+
Sbjct: 564 IINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 113/259 (43%), Gaps = 20/259 (7%)
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG--CIP 441
T GR + +++ M G +PD +Y+ ++ GLC + A ++L M ++ C
Sbjct: 147 TAGGRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPL 206
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ +T +I G ++D+A F M+++ D +I+ + ++ A ++
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISK 558
M+ K + P + +L+ + + +EA+ + + M + P + Y+ K
Sbjct: 267 TRMV-KNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 325
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL-------YKCPHHI 610
G +A + +L + + P S Y + + EG E DLL + HHI
Sbjct: 326 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385
Query: 611 RQDSKISLLFGS-AKSNKV 628
+++ G+ AK NKV
Sbjct: 386 -----FNMIMGAYAKHNKV 399
Score = 43.1 bits (100), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 120/311 (38%), Gaps = 52/311 (16%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ +P ST Y +L + +L + L M + + + I+G K K
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400
Query: 182 D--LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE-LSDNFVL-- 236
+ L N G+ +I N T++D++ + D + +K E L+ N V+
Sbjct: 401 EALLVFSNMRQQGLNPDIV--NYG-TVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 457
Query: 237 TVLKEL----RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
T++ L + V+ L F G +TI +N I+ L + V + N+ + M
Sbjct: 458 TLIHGLCTCDKWDKVEELAFEMI---DRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 514
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+ G E + +TY + + M++A+KL M+ KP
Sbjct: 515 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKP------------------ 556
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
S Y+ I ++ GR ++ +++ M G P +TY
Sbjct: 557 -------------------SDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYE 597
Query: 413 QVIFGLCKAGR 423
++ GL +AGR
Sbjct: 598 MLLQGLFQAGR 608
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 137/285 (48%), Gaps = 24/285 (8%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQD-CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+E+A++L E M +PS C+ L++ + + R A L + +
Sbjct: 72 LEEAIRLVESMAG--LEPSAAGPCAALIKKLCASG--------RTAEARRVLASCEPDVM 121
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + G+ D A +++ AM EPD TY+ +I GLC GR ++A VLD+M
Sbjct: 122 SYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDDM 178
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC+PD+ T+TIL++ C + +A+ +M +K D +V++NG + RV
Sbjct: 179 LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV 238
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A + L + + P ++ +++ L A R E+A L+ M ++ PP F
Sbjct: 239 DDAMEFL-KSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNM 297
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY---PSSAAYLQVFESFFNE 593
+ ++ + G VE A E L + +Y P+S +Y + +F +
Sbjct: 298 LISFLCRRGLVEPAMEILD--QIPKYGCTPNSLSYNPILHAFCKQ 340
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/415 (22%), Positives = 173/415 (41%), Gaps = 39/415 (9%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDL 183
P + Y+ ++R L + L M C + TY +L K++ +
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207
Query: 184 AALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
L++ D G +I NV VV G + ++ +E LK L
Sbjct: 208 KLLDEMRDKGCAPDIVTYNV------VVNGICQEGRVDDAME-------------FLKSL 248
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
Y G + NT++YN +L+ L E D ++ EM ++G ++
Sbjct: 249 PSY---------------GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVV 293
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
T+ + + ++E A+++ + + P+ + +L + D + F
Sbjct: 294 TFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF--VE 351
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
S G Y+ + AL + G D A +++ +K+ G P I+Y+ VI GL KAG
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ E+A +L+EM G PDI T++ + G C ++ A+ F K+ + + L +
Sbjct: 412 KTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYN 471
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
++ G ++ + A L M+ + P ++T+ LIE L ++EA ++
Sbjct: 472 AILLGLCKRRATHSAIDLFTYMVSNGCM-PNESTYTILIEGLAYEGLVKEAREMM 525
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + R L GR D A ++ M G PD +TY+ ++ CK ++ A +LDEM
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ GC PDI T+ +++ G C VD A+ + + + ++++ G + +R
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPF 552
A KL+ EM K R P TF LI L +E AM +L + K P P
Sbjct: 275 DAEKLMAEMSRKGR-PPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333
Query: 553 VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K ++ A F++ + S YP +Y + + G A +LL++
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 134/287 (46%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N + YN ++ + +V E M G ++ TY ++ F K R ++ A
Sbjct: 207 GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRA 266
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF M+D P+V + L++ S + L +R+ E+ G ++ +
Sbjct: 267 MMLFSRMVDAGLVPNVVTYTALIQGQCS--DGQLDCAYRLLQSMENSGLVPNEWTCSVLI 324
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K R EA+ ++ ++ G + + I Y+ +I GLCKAGRF A ++ + G +
Sbjct: 325 DALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFV 384
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T++ LI G C E+ A+L MMEK ++I+ + + +G+ K+
Sbjct: 385 PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKI 444
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +MI ++P T+ + R+E+A +++ M P
Sbjct: 445 LDKMI-AAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCP 490
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 118/250 (47%), Gaps = 15/250 (6%)
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC---SLLLRSISSIN 350
+ G+ D Y + + ++ A +LF M P + V+ + LL +
Sbjct: 100 RAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM---PLRGCVRTAFTYTALLHGLCGA- 155
Query: 351 NPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G+V + + + G + VY + L GR EAE ++ GFEP+
Sbjct: 156 ----GMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPN 211
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ +I G C G E A +V + M+ NGC P+++T+T LI G C + ++DRA++ F+
Sbjct: 212 VVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFS 271
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M++ + LI G S +++ AY+LL M E L P + T LI+ L
Sbjct: 272 RMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSM-ENSGLVPNEWTCSVLIDALCKH 330
Query: 528 RRLEEAMNLL 537
R+ EA LL
Sbjct: 331 ERVGEAQLLL 340
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 127/287 (44%), Gaps = 15/287 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + TY +R + D +++ M G ++ TY + + +
Sbjct: 451 AGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQ 510
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSI----SSINNPDLGL-VFRVAN-KY-ESLGNSLS 372
A F+ M+ KP+ + ++LLR + SS N P + ++++A KY L +
Sbjct: 511 AFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMV 570
Query: 373 K-------SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
K +Y+ +L ++ R DEA+ ++ M++A P Y+ +I C+
Sbjct: 571 KLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLT 630
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A +D M ++G IP ++++ +I C + A F M+ K Y+ + +LI
Sbjct: 631 EALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILI 690
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+G L + V LL M EK RP A + L K+ A ++E
Sbjct: 691 DGLLQKGYVAECSSLLSVMEEK-NYRPSDALYARLTGKITDANDIQE 736
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 1/184 (0%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + A G +++ + ++ AGF PD+ Y+ + G C+AG AC + M
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC+ T+T L+ G C A V A+ FA M D + +++G R
Sbjct: 135 LRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTR 194
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A LL + + + P + LI+ LE A+++ M P + +
Sbjct: 195 EAETLLSDAMAE-GFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253
Query: 556 ISKF 559
IS F
Sbjct: 254 ISGF 257
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 148/365 (40%), Gaps = 23/365 (6%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E+SG N T + ++ L +HE V + ++ + ++G +++ Y + K
Sbjct: 309 ENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRF 368
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A +L + ++ + P S L+ + +L V + G S Y
Sbjct: 369 AAADRLMQTLVSQGFVPDAHTYSSLIDGLC--RQKELSEAMLVLDDMMEKGVQPSPVTYT 426
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L + D ++K++ M AG +PD TY+ + C GR EDA +++ M ++
Sbjct: 427 IIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDH 486
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ T+ LI G+ +A F M+ + + VL+ + ++ N
Sbjct: 487 GVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546
Query: 498 ----------------YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ LL EM+ K++L + + L RL+EA LL M+
Sbjct: 547 PANSVSIWKIAEMKYLHGLLEEMV-KLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQ 605
Query: 542 KQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHY 597
N P + + I+ + + +A F+ ++ Y P +Y + S EG
Sbjct: 606 SANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQ 665
Query: 598 EAKDL 602
AK +
Sbjct: 666 TAKQV 670
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 12/196 (6%)
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+++T+T LI +C A ++ + + ++ + D+ + G+ + A +L
Sbjct: 71 NLRTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLF 130
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
V M + +R T+ L+ L GA + EAM++ M+ P P + V +
Sbjct: 131 VLMPLRGCVRT-AFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCG 189
Query: 559 FGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-----CPHHIRQ 612
G +A L A++ P+ Y + + + N G A D+ + C ++R
Sbjct: 190 AGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRT 249
Query: 613 DSKISLLFGSAKSNKV 628
++ L+ G KS K+
Sbjct: 250 YTE--LISGFCKSRKL 263
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 57/155 (36%), Gaps = 1/155 (0%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I C AG + L + G PD +T + G+C A + A F M
Sbjct: 74 TYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLM 133
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ A L++G V A + M + P + T++ L GA R
Sbjct: 134 PLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGM-QADGCAPDPHVYATMVHGLCGAGR 192
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
EA LL + + P + I + V D
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGD 227
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 143/347 (41%), Gaps = 41/347 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G N ITY+ ++ L + + +++EM + G++ D+ Y + K R ++
Sbjct: 164 ETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLD 223
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A++L + M+ P+V + L+ D FR+ G Y+
Sbjct: 224 EALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDR--AFRLIQVMSERGCPPDVINYNT 281
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR------FEDACNVLD 432
+ L + R D+A+ ++K M A PD ITYS +I GLCK R E AC +L+
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILE 341
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M++ GC P+ T+ ++I+G C A + +AL +M++ D ++I
Sbjct: 342 MMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSH 401
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
++ AYK+ M E+ +P + LI+ L
Sbjct: 402 DLDAAYKIFGMMSER-ECKPNPVAYAALIDGL---------------------------- 432
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
SK G V+ A + + P A Y V + GR EA
Sbjct: 433 ----SKGGEVDKAVRVFELMVESFRPGVATYNSVLDGLCGVGRIEEA 475
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 148/336 (44%), Gaps = 43/336 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TY ++ L + + + +++EM+ G + + + R K DA+ F
Sbjct: 29 NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ + P + ++L+ AL
Sbjct: 89 KTVAGTKCTPDIITFNILVD-------------------------------------ALV 111
Query: 385 KLGRFDEAEKMMKAMKNAG-FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K GR +EA ++ ++M + P+ +TY+ VI GLCK G+ + A +LD M E GC P++
Sbjct: 112 KSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNV 171
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+++L++G C A D+ +M + + D + + L+NG +R++ A + LV+
Sbjct: 172 ITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALE-LVQ 230
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
++ + P T+ +L+E +++++ A L+++M ++ PP + I+
Sbjct: 231 LMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDA 290
Query: 561 TVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGR 595
++DA LK + + + P Y + + + R
Sbjct: 291 RLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWR 326
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 12/295 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +NG++R L + D + + DI T+ + K +E+A
Sbjct: 60 GIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEA 119
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
++FE M P+V + ++ + D + + + N+ N ++ SV
Sbjct: 120 FQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSV--- 176
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K GR D+ +++ M GF+PD I Y+ ++ GLCK+ R ++A ++ M +G
Sbjct: 177 LVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSG 236
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+ L++ C + +VDRA M E+ D + +I G R++ A
Sbjct: 237 CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQ 296
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLLRLMKKQNYPP 547
LL +M+ R P T+ T+I+ L R LE A +L +MK+ PP
Sbjct: 297 ALLKQMV-AARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPP 350
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 151/338 (44%), Gaps = 39/338 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG +TYN ++ + R + V + +++ M + G D+ Y + + ++
Sbjct: 234 RSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLD 293
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DA L + M+ P V S ++ + +RV +
Sbjct: 294 DAQALLKQMVAARCVPDVITYSTIIDGLCKD--------WRVDADW-------------- 331
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + A ++++ MK G P+ TY+ VI GLC+A + + A +L M ++
Sbjct: 332 ---------KLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSE 382
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+PD+ +++++I C ++++D A F M E+ + LI+G V+ A
Sbjct: 383 VVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAV 442
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPE--PFVQY 555
++ M+E RP AT+ ++++ L G R+EEA+ ++ ++ K+ +P ++
Sbjct: 443 RVFELMVES--FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRG 500
Query: 556 ISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
+ + VE+A E +A+ K + A + V+ NE
Sbjct: 501 LCRVSCVEEAYELFQAVEAKGF---AMEVGVYNVLVNE 535
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 170/392 (43%), Gaps = 43/392 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ F+P +Y+ +L L L + ++ M CY TY S++ + ++K+
Sbjct: 199 RRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQV- 257
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D + I + + DV+ +++ I D +++ +L +
Sbjct: 258 ---------DRAFRLIQVMSERGCPPDVI---NYNTVIAGLCRDARLD-DAQALLKQMVA 304
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN------VVEEMKKE 295
R P + ITY+ I+ L + V W ++E MK+
Sbjct: 305 ARCVP------------------DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQT 346
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + TY + + R + A+ L M+D P + S+++ S+ ++ D
Sbjct: 347 GCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAA 406
Query: 356 L-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
+F + ++ E N ++ Y + L+K G D+A ++ + M + F P TY+ V
Sbjct: 407 YKIFGMMSERECKPNPVA---YAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSV 462
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLC GR E+A +++ M C PD ++ LI+G C + V+ A F + K +
Sbjct: 463 LDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGF 522
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ + +VL+N +KR++ A+ + ++IE
Sbjct: 523 AMEVGVYNVLVNELCKKKRLSDAHGVANKLIE 554
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + G+ +A ++ + + P+ TY +I GLCKAG+ + A +LDEM + G P
Sbjct: 8 LVRAGQHGQAVQLFREERCV---PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +I+G C A AL F + D ++L++ + RV A+++
Sbjct: 65 VAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
M + P T+ T+I L +L+ A+ LL LM + P + V+ + K
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184
Query: 560 GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G + L+ ++ + + P Y + R EA +L+
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELV 229
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 160/368 (43%), Gaps = 35/368 (9%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W D+ + L + L+ V +LK+ + V A FF W + +G+KH+ TY IL
Sbjct: 17 WGDETVRALAGLNASLNAYQVNEILKQQKEAGV-AYNFFIWARKQAGFKHDVHTYTTILG 75
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM-MDGPYK 333
+L R +S N+++EM +EG E ++ TY ++ + + ++ ++KLF M M G
Sbjct: 76 ILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGCEP 135
Query: 334 PSVQDCSLL-LRSISSINN---------------PD----------LGLVFRVANKYESL 367
V C+L+ L++ + ++ PD LG ++ Y+
Sbjct: 136 DRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYKLF 195
Query: 368 ------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
G + S Y+ I K G+FD A K+ ++ G+ PD +TY ++ L
Sbjct: 196 CEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVLGNC 255
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
G EDA V +EME G + D + +++ ++A F +M++ +
Sbjct: 256 GHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAAQWFNRMLDSGLQPNVPAC 315
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ L++ +L + A +L M K L P T+ +L+ R E L LM
Sbjct: 316 NSLLSAYLRSSFYDAAGGVLGGM-AKWGLYPTLQTYTSLLSSCAACRAAWEYDALFGLMG 374
Query: 542 KQNYPPFP 549
+P P
Sbjct: 375 GTGHPAHP 382
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 89/196 (45%), Gaps = 7/196 (3%)
Query: 383 LTKLGR---FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L LGR FD ++ M G EP+ +TY+++I +A + + + + M+ GC
Sbjct: 74 LGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLDSSLKLFNVMQMVGC 133
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ LI A D A+ + +M + D ++I+ ++N AYK
Sbjct: 134 EPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIIIHCLGKAGKLNAAYK 193
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L EM ++ P T+ +I+ A + + A+ L +++ Y P + ++ +
Sbjct: 194 LFCEMTDR-GYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYAPDRVTYGIIMEVL 252
Query: 557 SKFGTVEDASEFLKAL 572
G +EDA + + +
Sbjct: 253 GNCGHIEDAEQVFEEM 268
>gi|356564752|ref|XP_003550612.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 544
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 177/417 (42%), Gaps = 45/417 (10%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---------- 278
L+ + VL V+K P FFR+ E H+ TYN +LR L +
Sbjct: 72 HLTPSHVLEVVKRFN-NPNLGFKFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLL 130
Query: 279 HESVR---------------------DFWNVVEEMKKE----GYEMDIDTYIKISRQFQK 313
++S+R D ++V +E+ E G ++D+ Y K
Sbjct: 131 YDSMRSDGQLPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILIK 190
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
++DA+ LF +M ++L+R + + + D F + S G S
Sbjct: 191 HNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEA--FELLGDMGSFGCSPDI 248
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMK-NAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ + L ++ + D A +++ + F P+ ++Y+ VI G C+ + ++A ++
Sbjct: 249 VTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSLFY 308
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM +G P++ T++ L+ G A ++ AL K++ + L LING+
Sbjct: 309 EMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCRAG 368
Query: 493 RVNGAYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP-- 549
VN L EM R P T+ LI L + RL+EA NLLR++K+ + P
Sbjct: 369 WVNHGLDLWREM--NARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFV 426
Query: 550 -EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
P + K G +++A+ + + K P + + +GR EA + YK
Sbjct: 427 YNPVIDGYCKSGNIDEANAIVAEMEEKCKPDKLTFTILIIGHCMKGRTPEAIGIFYK 483
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 195/487 (40%), Gaps = 57/487 (11%)
Query: 39 SSFTASNQSHTSQFHINTCQ-KIFFSTSPNSSLELILACDW--SDELENK-LEELSPKLT 94
S FTA SH T K T+P+S I++ + S+ L+++ L LT
Sbjct: 15 SFFTAIRASHYRTLTQATASDKGLIITTPDSWFVKIVSTLFLCSNSLDDRFLGYFREHLT 74
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK---DSLKQFWVT 151
V+ V+++ +N P FF + ++ S Y+++LR+L +S K + +
Sbjct: 75 PSHVLEVVKRFNN-PNLGFKFFRFTRERLSMSHSFWTYNMLLRSLCQAGLHNSAKLLYDS 133
Query: 152 LRRMKEDHCYIEEETYLSIL----GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
+R + + + L L + + + +L A Q V I +N L+
Sbjct: 134 MRSDGQ----LPDSRLLGFLVSSFALADRFDVSKELLAEAQCSGVQVDVIVYNNFLNILI 189
Query: 208 DVVLGSDWDDKIGKKLEDMKIELS-DNFVLTVLKELRIYPVKALGFFRWVGEHS--GYKH 264
+ DD I E M+ D F +L F +G+ G
Sbjct: 190 K---HNRLDDAICLFRELMRSHSCLDAFTFNILIRGLCTAGDVDEAFELLGDMGSFGCSP 246
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN +L L R + V +++EE+ K + ++ +Y + + + M++A L
Sbjct: 247 DIVTYNILLHGLCRIDQVDRARDLLEEVCLKCEFAPNVVSYTTVISGYCRLSKMDEASSL 306
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYES 366
F M+ KP+V S L+ + P++ + + N Y
Sbjct: 307 FYEMVRSGTKPNVFTFSALVDGFVKAGDMASALGMHKKILFHGCAPNVITLTSLINGYCR 366
Query: 367 LG------------NSLSKS----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G N+ + Y + AL K R EA +++ +K + P
Sbjct: 367 AGWVNHGLDLWREMNARNIPANLYTYSVLISALCKSNRLQEARNLLRILKQSDIVPLAFV 426
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ VI G CK+G ++A ++ EMEE C PD T+TILI GHC A+ F KM+
Sbjct: 427 YNPVIDGYCKSGNIDEANAIVAEMEEK-CKPDKLTFTILIIGHCMKGRTPEAIGIFYKML 485
Query: 471 EKNYDAD 477
D
Sbjct: 486 ASGCTPD 492
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 130/290 (44%), Gaps = 4/290 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + +TYN ++ R + + + +++ M +G + + TY I K
Sbjct: 385 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 444
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A + + M+ P ++LL + N ++ R+ ++ S G +
Sbjct: 445 LRAKGVLDEMLKIGMSPDTATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 502
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L+K G D+A K + MKNAG PDN+ Y+ +I G C+ G +A V DEM E
Sbjct: 503 ALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 562
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC D+ T+ ++ G C + A F +M E+ D LING+ +N A
Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA 622
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYP 546
L MI++ L+P T+ TLI+ +E+ L ++ ++ YP
Sbjct: 623 VTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 671
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/349 (22%), Positives = 145/349 (41%), Gaps = 7/349 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T TYN +L R++++ D + +EM +G D+ ++ + K ++ A
Sbjct: 458 GMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQA 517
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K F M + P ++L+ N + +V ++ G L Y+ I
Sbjct: 518 LKYFRDMKNAGLAPDNVIYTILIGGFCR--NGVMSEALKVRDEMLEQGCXLDVVTYNTIL 575
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K EA+++ M G PD T++ +I G K G A + + M +
Sbjct: 576 NGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLK 635
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G C +E+++ + M+ + + +LING+ + V+ A++L
Sbjct: 636 PDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRL 695
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM+EK T T+++ A +A L M + P + I+ F
Sbjct: 696 WDEMVEK-GFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFI 754
Query: 561 TVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
E+ ++ E P Y + F +GR EA+ ++ K
Sbjct: 755 KEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLK 803
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 120/280 (42%), Gaps = 33/280 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN IL L + + + + + EM + G D T+ + + K M A
Sbjct: 563 GCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKA 622
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISS-----------------------------INN 351
V LFE M+ KP V + L+ IN
Sbjct: 623 VTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILING 682
Query: 352 -PDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
++G V FR+ ++ G + + I + + G +A++ + M G PD
Sbjct: 683 YCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPD 742
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
ITY+ +I G K + A ++++ME +G +PD+ T+ +++ G + A L
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 802
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
KM+E+ + D LING ++Q + A+++ EM+++
Sbjct: 803 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 145/360 (40%), Gaps = 52/360 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + +Y++++ + + M E C ++ TY +IL L K K S+ L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
F + + + D T ++ G D + K + ++ + N
Sbjct: 591 --FTEMTERGVFPD--FYTFTTLINGYXKDGNMNKAVTLFEMMIQRNL------------ 634
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDT 303
K + +TYN ++ + E V + WN + + + Y I
Sbjct: 635 ----------------KPDVVTYNTLIDGFCKGSEMEKVNELWN--DMISRRIYPNHISY 676
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
I I+ + + +A +L++ M++ ++ ++ C+ +++ N
Sbjct: 677 GILIN-GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN--------AVKA 727
Query: 364 YESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
E L N L K + Y+ + K D A ++ M+N+G PD ITY+ ++ G
Sbjct: 728 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 787
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+ GR ++A ++ +M E G PD T+T LI GH N + A +M+++ + D
Sbjct: 788 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
FRV +S G +S + + + L K+G D A ++ + + +G + + T + +I
Sbjct: 311 FRV---LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 367
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCK + E+ + L +MEE G PD+ T+ LI +C ++ A M K
Sbjct: 368 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 427
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ +ING + A +L EM+ K+ + P AT+ L+ + + +A +
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVECCRNDNMMDAERIF 486
Query: 538 RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNE 593
M Q P F + +SK G ++ A ++ + + + P + Y + F
Sbjct: 487 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 546
Query: 594 GRHYEA 599
G EA
Sbjct: 547 GVMSEA 552
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 143/343 (41%), Gaps = 10/343 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ + R + ++ +M K GY I T + F +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+AV L + M++ Y+P + L+ + N + LV R+ K G
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK----GCQPDLVT 217
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G D A ++ M+ E D + Y+ +I GLCK +DA ++ ++ME
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD+ T+ LI C A + M+EKN + D + LI+ F+ + ++
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A KL EM++ P + TLI+ +R+EE M + R M ++ +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 556 ISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEG 594
I F D F + +S +P Y + + N G
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 7/300 (2%)
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+SR+ + ++DA+ LF M+ PS+ + S LL +I+ +N DL V + + ++
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL--VISLGEQMQN 103
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S + Y + + A ++ M G+ P +T + ++ G C R +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++D+M E G PD T+T L+ G N+ A+ +M+ K D +IN
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + A LL +M EK ++ + T+I+ L + +++A +L M+ +
Sbjct: 224 GLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 547 P---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P P + + +G DAS L + K P + + ++F EG+ EA+ L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 38/372 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + N++ +M+K E D+ Y I K++ M+DA
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 321 VKLFEFMMDGPYKPSV----------------QDCSLLLRSISSIN-NPDLGLVFRVANK 363
LF M KP V D S LL + N NPDL + +
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 364 Y---------ESLGNSLSKS--------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ E L + + KS Y+ + + K R +E ++ + M G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ +TY+ +I G +A ++A V +M +G PDI T+ IL+ G C V+ AL+ F
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M +++ D +I +V + L + K ++P T+ T++
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCR 508
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAY 583
EEA L MK+ P + I + G ++E +K + + A+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Query: 584 LQVFESFFNEGR 595
+ + ++GR
Sbjct: 569 FGLVTNMLHDGR 580
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ K+ +FD + + M+N G + TYS I C+ + A +L +M + G P
Sbjct: 84 AIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP 143
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
I T L+ G C N + A+ +M+E Y D L++G + + A L+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISK 558
M+ K +P T+ +I L + A+NLL M+K + + K
Sbjct: 204 ERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++DA + + K P Y + N GR +A LL
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S + S + + R + + + D+A + M + P + +S+++ + K +F+
Sbjct: 33 SFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 92
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ ++M+ G ++ T++I I C +++ AL KMM+ Y L+ L+
Sbjct: 93 LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLL 152
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NGF R++ A L+ +M+E + +P TF TL+ L + EA+ L+ M +
Sbjct: 153 NGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 546 PP 547
P
Sbjct: 212 QP 213
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+++ L E M+ Y P V C+ L++ ++ N + RV E G Y+
Sbjct: 103 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN--VPKAVRVMEILEKFGQP-DVFAYNA 159
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K+ R D+A +++ M++ F PD +TY+ +I LC G+ + A VLD++ +
Sbjct: 160 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDN 219
Query: 439 CIPDIKTWTILIQ-----------------------------------GHCAANEVDRAL 463
C P + T+TILI+ G C VDRA
Sbjct: 220 CQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 279
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ K + D ++L+ L+Q + KL+ +M + + P T+ LI
Sbjct: 280 EMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITT 338
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKAL-SVKEYPS 579
L ++EEAMNLL+LMK++ P +P + + G ++ A EFL+ + S P
Sbjct: 339 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 398
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y V + G+ +A ++ K
Sbjct: 399 IVNYNTVLATLCKNGKADQALEIFGK 424
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 143/324 (44%), Gaps = 10/324 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN I+R + + V + ++ ++ +G E D+ +Y + R E+
Sbjct: 254 GLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEG 313
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL M P+V S+L+ ++ + + + + G + YD +
Sbjct: 314 EKLMTKMFSEKCDPNVVTYSILITTLC--RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLI 371
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A + GR D A + ++ M + G PD + Y+ V+ LCK G+ + A + ++ E GC
Sbjct: 372 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 431
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ ++ + ++ + RAL +M+ D D + +I+ + V+ A++L
Sbjct: 432 PNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFEL 491
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
LV+M P T+ ++ A R+E+A+++L M P + I G
Sbjct: 492 LVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIG 550
Query: 561 -------TVEDASEFLKALSVKEY 577
+E A++ ++ ++ EY
Sbjct: 551 FAGYRAEAMELANDLVRINAISEY 574
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 82/389 (21%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKK 176
K F P + Y++M+ +L ++ L L ++ D+C TY ++ G + +
Sbjct: 183 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDE 242
Query: 177 AKK----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
A K D+ N GM KE +D + + ++ L D I
Sbjct: 243 ALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVI------- 295
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRW-VGEHSGYKH-------NTITYNGILRVLAR 278
S N +L L L +W GE K N +TY+ ++ L R
Sbjct: 296 ----SYNILLRAL----------LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 341
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + N+++ MK++G D +Y + F + ++ A++ E M+ P + +
Sbjct: 342 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 401
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA---------------- 382
+ +L ++ D L + K +G S + S Y+ + A
Sbjct: 402 YNTVLATLCKNGKADQAL--EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 459
Query: 383 -------------------LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
L + G D+A +++ M++ F P +TY+ V+ G CKA R
Sbjct: 460 MVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 519
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQG 452
EDA +VLD M NGC P+ T+T+LI+G
Sbjct: 520 IEDAIDVLDSMVGNGCRPNETTYTVLIEG 548
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 159/371 (42%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ YN ++ + + D V++ M+ + + D TY + ++ A+K+
Sbjct: 153 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 212
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ ++ +P+V ++L+ + D L ++ ++ S G Y+ I R +
Sbjct: 213 DQLLSDNCQPTVITYTILIEATMLEGGVDEAL--KLLDEMLSRGLKPDMFTYNTIIRGMC 270
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G D A +M++ ++ G EPD I+Y+ ++ L G++E+ ++ +M C P++
Sbjct: 271 KEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 330
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ILI C +++ A+ M EK DA D LI F + R++ A + L M
Sbjct: 331 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 390
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
I L P + T++ L + ++A+ + + + P + S + D
Sbjct: 391 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 449
Query: 565 ASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY---KCPHHIRQDSKIS 617
L+ +S P Y + EG +A +LL C H +
Sbjct: 450 KIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNI 509
Query: 618 LLFGSAKSNKV 628
+L G K++++
Sbjct: 510 VLLGFCKAHRI 520
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 419 CKAGRFEDACNVLDEMEENG-------CI---------------------------PDIK 444
C++G + ++ ++L+ M G C PD+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFGQPDVF 155
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI G C N +D A +M K++ D +++I S+ +++ A K+L ++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
+ +P T+ LIE + ++EA+ LL M + P ++ + K G
Sbjct: 216 LSD-NCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V+ A E ++ L +K P +Y + + N+G+ E + L+ K
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 319
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 164/395 (41%), Gaps = 45/395 (11%)
Query: 250 LGF-FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
LGF F +G+ GY+ +T T+ ++R L + + + ++M EG++ D+ TY
Sbjct: 105 LGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGT 164
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K A++ M +P+V S ++ S+ + L + + +
Sbjct: 165 LINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLC--KDRQLTEALSLFSDMLA 222
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S + Y + L LG + EA ++ AM + PD +T++ ++ LCK G
Sbjct: 223 KGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVK 282
Query: 427 A-----------------------------------CNVLDEMEENGCIPDIKTWTILIQ 451
A NV D M GC+P + ++T LI
Sbjct: 283 AHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G+C +D+A+ F +M ++ D + LI+G R+ A L EM+ ++
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQI- 401
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
P T++ L + L RL EAM LL++++ N P + + + + G +E A +
Sbjct: 402 PDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDL 461
Query: 569 LKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
LS K +P Y + +G EA L
Sbjct: 462 FSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKL 496
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 154/384 (40%), Gaps = 42/384 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HNT T N ++ + ++V+ ++ K GY+ T+ + R + +A
Sbjct: 84 GIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEA 143
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----------YESLGNS 370
++LF+ M ++P V L+ + + N + F + + Y ++ +S
Sbjct: 144 LQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDS 203
Query: 371 LSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L K Y + L LG + EA ++ AM + PD
Sbjct: 204 LCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPD 263
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+T++ ++ LCK G A V+D M ++ PD+ T+ L+ GHC +E+ + + F
Sbjct: 264 QLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFD 323
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M+ K LING+ + ++ A L EM ++ L P T+ TLI L
Sbjct: 324 TMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ-GLIPDTVTYNTLIHGLCHV 382
Query: 528 RRLEEAMNLLRLMKKQNYPPFPE-----PFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
RL +A+ L M Y P+ Y+ K + +A LK + P
Sbjct: 383 GRLRDAIALFHEMVV--YGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIH 440
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK 605
Y V + G A+DL K
Sbjct: 441 IYSIVMDGMCRAGELEAARDLFSK 464
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 96/395 (24%), Positives = 176/395 (44%), Gaps = 23/395 (5%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P Y ++ L + LR M++ +C Y +I+ L K ++ ++
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE-- 212
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVD--VVLGSDWDDKI-------GKKLEDMKIELSDNF 234
AL+ F D + K I+ +N +L+ +LG W + I +K+ M +L+ N
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGH-WKEAIRLFYAMIHRKI--MPDQLTFNT 269
Query: 235 VLTVL-KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
++ L KE + VKA + V S K + +TYN ++ + NV + M
Sbjct: 270 LVDALCKEGMV--VKA-HYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMV 326
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-P 352
++G + +Y + + K ++M+ A+ LFE M P + L+ + +
Sbjct: 327 RKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLR 386
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D +F Y + + ++ Y + L K R EA ++K ++ +PD YS
Sbjct: 387 DAIALFHEMVVYGQIPDLVT---YRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 443
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
V+ G+C+AG E A ++ ++ G PD++T+TI+I G C + A F +M E
Sbjct: 444 IVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDEN 503
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+A +++ GFL A +L EM+ +
Sbjct: 504 GCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSR 538
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 34/264 (12%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS----------------SINNPD------- 353
++DA+ LF M+ PS+ D S LL SI+ S P
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 354 ----------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
LG F V LG S + + + R L G+ EA ++ M G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
F+PD +TY +I GLCK G A L ME+ C P + ++ +I C ++ AL
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F+ M+ K + LI+G A +L MI + ++ P Q TF TL++
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHR-KIMPDQLTFNTLVDA 273
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP 547
L + +A ++ +M + + P
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKP 297
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 14/351 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+G R +G S + ++YN ++ L + + +++ ++ EM+ G + T +
Sbjct: 162 EAMGLIREMGRKS-VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTL 220
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K M++A++L E M + V L+ + N D G +F E
Sbjct: 221 MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD-----EM 275
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
LG +S +V Y + L +LG++ EA ++ AM G PD +TY+ +I GLCK GR
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A ++L+ M E G P T+ +L+ G C V A M+EK AD + L
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ G + +V+ A KL M + L P TF LI L RL +A+ + R M K+
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESF 590
+ + K G +++A E K L + P+S Y + + F
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 122/274 (44%), Gaps = 7/274 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS S L+ + P LG F V G +++ + + + + L + G EA
Sbjct: 107 PSFGSLSALIECFADAQKPQLG--FGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAM 164
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+++ M PD ++Y+ +I GLCKA + ++A +L EME GC P+ T T L+ G
Sbjct: 165 GLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGL 224
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +D A+ M +K +DAD L LI+GF + ++ +L EM+ K +
Sbjct: 225 CKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGK-GISAN 283
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
T+ L+ L + +EA +L M + P + I K G A + L
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343
Query: 571 ALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K E PS+ Y + EG +A +L
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 377
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 5/314 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TYN +L L + V D + ++ M ++G + D+ TY + + +++A
Sbjct: 349 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 408
Query: 321 VKLFEFMMDGP--YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+KLF M D +P+V ++L+ + L ++ K G+ + Y+
Sbjct: 409 LKLFNSMFDNENCLEPNVFTFNMLIGGLCK--EGRLTKAVKIHRKMVKKGSCGNLVTYNM 466
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G+ EA ++ K + + GF P++ TYS +I G CK A + EM +G
Sbjct: 467 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 526
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + + L+ C +++A F +M N + D + +I+G L
Sbjct: 527 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 586
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L ++M+E + LRP TF TLI +L L+EA + L M + P + +
Sbjct: 587 ELQMKMVE-MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Query: 559 FGTVEDASEFLKAL 572
+ D +E + L
Sbjct: 646 LSSKGDTTEIINLL 659
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 107/476 (22%), Positives = 195/476 (40%), Gaps = 43/476 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ F + + +++L+ L + + +R M + +Y +++ L KAKK
Sbjct: 137 KRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196
Query: 182 DLAAL----------------NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
+ L DG+ K+ MD + L + + KK D
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL----------EAMKKKGFD 246
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+ L + + K L F +G+ G N +TY+ ++ L R ++
Sbjct: 247 ADVVLYGTLISGFCNNGNLDRGKEL-FDEMLGK--GISANVVTYSCLVHGLCRLGQWKEA 303
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V+ M + G D+ TY + K A+ L M++ +PS ++LL
Sbjct: 304 NTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSG 363
Query: 346 ISSINNPDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM--K 400
+ GLV F++ G Y+ + + L G+ DEA K+ +M
Sbjct: 364 LCKE-----GLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
EP+ T++ +I GLCK GR A + +M + G ++ T+ +L+ G A ++
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 478
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ + ++++ + ++ +LI+GF + +N A L EM L P + TL
Sbjct: 479 EAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEM-RTHGLNPALFDYNTL 537
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS-EFLKALSVK 575
+ L LE+A +L + M N P F I GT++ +F+K L +K
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID--GTLKAGDFQFVKELQMK 591
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T+N ++ L + + + +M K+G ++ TY + K +++A++L+
Sbjct: 425 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 484
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ ++D + P+ S+L+ + ++ + L +L Y+ + +L
Sbjct: 485 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD--YNTLMASLC 542
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G ++A+ + + M NA EPD I+++ +I G KAG F+ + +M E G PD
Sbjct: 543 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 602
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ LI E+D A +M+ + DA + D L+ G S+ LL +M
Sbjct: 603 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 662
Query: 505 IEK 507
K
Sbjct: 663 AAK 665
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N+ TY+ ++ + + + EM+ G + Y + K +E A
Sbjct: 491 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 550
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF+ M + +P + + ++ ++ D V + K +G + +
Sbjct: 551 KSLFQEMGNANCEPDIISFNTMIDG--TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 608
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+KLG DEA+ ++ M +GF PD + Y ++ GL G + N+L +M G +
Sbjct: 609 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
Query: 441 PDIKTWTILIQGHC-AANEVD 460
D K + ++ C + EVD
Sbjct: 669 LDRKIVSTILTCLCHSIQEVD 689
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 147/354 (41%), Gaps = 47/354 (13%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D A N + +K + PS+ Y+++L L + + + LR M E
Sbjct: 332 DGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE-------- 382
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
K KKA D+ N G+ + +D K + S +D++ +
Sbjct: 383 ----------KGKKA-DVVTYNTLMKGLCDKGKVDEALK-----LFNSMFDNE---NCLE 423
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+ + + + KE R+ KA+ R + G N +TYN +L + +++
Sbjct: 424 PNVFTFNMLIGGLCKEGRL--TKAVKIHRKM-VKKGSCGNLVTYNMLLGGCLKAGKIKEA 480
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ +++ G+ + TY + F K RM+ A LF M P++ D + L+ S
Sbjct: 481 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMAS 540
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSK-------SVYDGIHRALTKLGRFDEAEKMMKA 398
+ G + + + ++ +GN+ + ++ DG +A G F +++
Sbjct: 541 LCKE-----GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA----GDFQFVKELQMK 591
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
M G PD +T+S +I L K G ++A + L+ M +G PD + L++G
Sbjct: 592 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 645
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I+++G C V A+ +M K+ D + LING K++ A LL+EM E
Sbjct: 149 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EA 207
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P T TL++ L R++EAM LL MKK+ + + IS F G ++
Sbjct: 208 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 267
Query: 565 ASEFLKALSVKEYPSSAA-YLQVFESFFNEGRHYEAKDLLYKCPHH-IRQD--SKISLLF 620
E + K ++ Y + G+ EA +L H I D + L+
Sbjct: 268 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 327
Query: 621 GSAKSNKVT 629
G K + T
Sbjct: 328 GLCKDGRAT 336
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 14/351 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+G R +G S + ++YN ++ L + + +++ ++ EM+ G + T +
Sbjct: 16 EAMGLIREMGRKS-VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTL 74
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K M++A++L E M + V L+ + N D G +F E
Sbjct: 75 MDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFD-----EM 129
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
LG +S +V Y + L +LG++ EA ++ AM G PD +TY+ +I GLCK GR
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A ++L+ M E G P T+ +L+ G C V A M+EK AD + L
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ G + +V+ A KL M + L P TF LI L RL +A+ + R M K+
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESF 590
+ + K G +++A E K L + P+S Y + + F
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 5/229 (2%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + L + G EA +++ M PD ++Y+ +I GLCKA + ++A +L EME G
Sbjct: 4 VLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAG 63
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P+ T T L+ G C +D A+ M +K +DAD L LI+GF + ++
Sbjct: 64 CFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGK 123
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI-- 556
+L EM+ K + T+ L+ L + +EA +L M + P + I
Sbjct: 124 ELFDEMLGK-GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 557 -SKFGTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G A + L + K E PS+ Y + EG +A +L
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKIL 231
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 142/314 (45%), Gaps = 5/314 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TYN +L L + V D + ++ M ++G + D+ TY + + +++A
Sbjct: 203 GEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEA 262
Query: 321 VKLFEFMMDGP--YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+KLF M D +P+V ++L+ + L ++ K G+ + Y+
Sbjct: 263 LKLFNSMFDNENCLEPNVFTFNMLIGGLCK--EGRLTKAVKIHRKMVKKGSCGNLVTYNM 320
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G+ EA ++ K + + GF P++ TYS +I G CK A + EM +G
Sbjct: 321 LLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHG 380
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + + L+ C +++A F +M N + D + +I+G L
Sbjct: 381 LNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVK 440
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L ++M+E + LRP TF TLI +L L+EA + L M + P + +
Sbjct: 441 ELQMKMVE-MGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Query: 559 FGTVEDASEFLKAL 572
+ D +E + L
Sbjct: 500 LSSKGDTTEIINLL 513
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 186/460 (40%), Gaps = 46/460 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P Y+ ++ L LK+ L M+ C+ T +++
Sbjct: 26 RKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLM---------- 75
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
DG+ K+ MD + L + + KK D + L +
Sbjct: 76 ---------DGLCKDGRMDEAMELL----------EAMKKKGFDADVVLYGTLISGFCNN 116
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ K L F +G+ G N +TY+ ++ L R ++ V+ M + G D+
Sbjct: 117 GNLDRGKEL-FDEMLGK--GISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDV 173
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV---F 358
TY + K A+ L M++ +PS ++LL + GLV F
Sbjct: 174 VTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKE-----GLVIDAF 228
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIF 416
++ G Y+ + + L G+ DEA K+ +M EP+ T++ +I
Sbjct: 229 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 288
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLCK GR A + +M + G ++ T+ +L+ G A ++ A+ + ++++ +
Sbjct: 289 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVP 348
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
++ +LI+GF + +N A L EM L P + TL+ L LE+A +L
Sbjct: 349 NSFTYSILIDGFCKMRMLNIAKGLFCEM-RTHGLNPALFDYNTLMASLCKEGSLEQAKSL 407
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDAS-EFLKALSVK 575
+ M N P F I GT++ +F+K L +K
Sbjct: 408 FQEMGNANCEPDIISFNTMID--GTLKAGDFQFVKELQMK 445
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T+N ++ L + + + +M K+G ++ TY + K +++A++L+
Sbjct: 279 NVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELW 338
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ ++D + P+ S+L+ + ++ + L +L Y+ + +L
Sbjct: 339 KQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD--YNTLMASLC 396
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G ++A+ + + M NA EPD I+++ +I G KAG F+ + +M E G PD
Sbjct: 397 KEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDAL 456
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ LI E+D A +M+ + DA + D L+ G S+ LL +M
Sbjct: 457 TFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQM 516
Query: 505 IEK 507
K
Sbjct: 517 AAK 519
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 86/201 (42%), Gaps = 3/201 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N+ TY+ ++ + + + EM+ G + Y + K +E A
Sbjct: 345 GFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQA 404
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF+ M + +P + + ++ ++ D V + K +G + +
Sbjct: 405 KSLFQEMGNANCEPDIISFNTMIDG--TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLI 462
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+KLG DEA+ ++ M +GF PD + Y ++ GL G + N+L +M G +
Sbjct: 463 NRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Query: 441 PDIKTWTILIQGHC-AANEVD 460
D K + ++ C + EVD
Sbjct: 523 LDRKIVSTILTCLCHSIQEVD 543
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 147/354 (41%), Gaps = 47/354 (13%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D A N + +K + PS+ Y+++L L + + + LR M E
Sbjct: 186 DGRATHAMDLLNLMVEKGE-EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE-------- 236
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
K KKA D+ N G+ + +D K + S +D++ +
Sbjct: 237 ----------KGKKA-DVVTYNTLMKGLCDKGKVDEALK-----LFNSMFDNE---NCLE 277
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
+ + + + KE R+ KA+ R + G N +TYN +L + +++
Sbjct: 278 PNVFTFNMLIGGLCKEGRL--TKAVKIHRKM-VKKGSCGNLVTYNMLLGGCLKAGKIKEA 334
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ +++ G+ + TY + F K RM+ A LF M P++ D + L+ S
Sbjct: 335 MELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMAS 394
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSK-------SVYDGIHRALTKLGRFDEAEKMMKA 398
+ G + + + ++ +GN+ + ++ DG +A G F +++
Sbjct: 395 LCKE-----GSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKA----GDFQFVKELQMK 445
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
M G PD +T+S +I L K G ++A + L+ M +G PD + L++G
Sbjct: 446 MVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKG 499
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 8/189 (4%)
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
I+++G C V A+ +M K+ D + LING K++ A LL+EM E
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEM-EA 61
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P T TL++ L R++EAM LL MKK+ + + IS F G ++
Sbjct: 62 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121
Query: 565 ASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYKCPHH-IRQD--SKISLLF 620
E + K ++ Y + G+ EA +L H I D + L+
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181
Query: 621 GSAKSNKVT 629
G K + T
Sbjct: 182 GLCKDGRAT 190
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 7/340 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
++G++ VRD K+ + DT K+ +FR + ++ +
Sbjct: 68 VFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEV 127
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ Y S+ ++L++ ++ L V + G S ++ + KLG
Sbjct: 128 LECGYPASLYFFNILMQRFC--KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
DE ++ AM +G +PD TYS +I GLCK G+ ++A + +EM +NG +P+ T+T
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI GHC +VD A+ + +M+ + D + LI G + + + L+ EMI
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVED 564
L+P + ++ TLI+ LE A+ L M +++ + IS + G D
Sbjct: 306 -GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASD 364
Query: 565 ASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
A + L+ LSV P + Y + F + A LL
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLL 404
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 166/392 (42%), Gaps = 54/392 (13%)
Query: 203 AKTLVDVVL---GSD-WDDKIGKKLEDMKIELSDNFVLTVLKELRI---YPVKALGFFRW 255
AK+L+ VV+ G D D LE + SD +V + L + + A+ FR
Sbjct: 32 AKSLIQVVVSRKGKDSASDVFEAILETKGTQRSDFYVFSGLMIAYLESGFVRDAVQCFRL 91
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+H + ++ +VL R F W+ +E+ + GY + + + ++F
Sbjct: 92 TKQHK----IRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFC 147
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K M A +F+ + +PSV + L+ + + D G FR+ + + G
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG--FRLKSAMHASGAQPD 205
Query: 373 KSVYDGIHRALTKLGRFDEAEKMM-----------------------------------K 397
Y + L K G+ DEA ++ K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M + G PD ITY+ +I+GLCK G + +++DEM NG PD ++T LI G C
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+++ AL KM++++ D LI+ + R + A K+L EM+ V L+P T+
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLS-VGLKPDNGTY 384
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+I + R + A LLR M++ P P
Sbjct: 385 TMIINEFCKKRDSKTASKLLREMQRDG--PLP 414
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++E V + ++M +G D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
L + M+ KP + L+ S DL + + NK L Y +
Sbjct: 295 VHDLIDEMIMNGLKPDKISYTTLIDG--SCKEGDLEIALELRNKMIQESIRLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M + G +PDN TY+ +I CK + A +L EM+ +G
Sbjct: 353 ISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGP 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 LPGVVT 418
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 154/332 (46%), Gaps = 15/332 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE----HSGYKHNTITYNGILRVLAR 278
L + LS+ VL VL + + FFRW G+ H TITY ++ +L +
Sbjct: 174 LTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGK 233
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ +++EM KEG + +D + + F +++AV +FE M + V+
Sbjct: 234 ARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVES 292
Query: 339 CSLLLRSISSINNPDLGLVFRVANK-YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKM 395
+ LL +++ LG R AN+ ++ + + + + Y + A EA ++
Sbjct: 293 FNCLLVALA---QEGLG---REANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRV 346
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M G +PD + ++ +I GL + R +A + + M+ G P++ T+T+LI+ HC
Sbjct: 347 WNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCK 406
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++D A+ CF +M + D L+ G+ + KR++ LL EM +K P
Sbjct: 407 RGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQK-GCPPDGR 465
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ LI+ L ++A + + M K+ P
Sbjct: 466 TYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 497
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 165/417 (39%), Gaps = 46/417 (11%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ----FRPSSTVYSLMLR 137
LE L LSP L+ V+ VL + + + FF W F ++ Y M+
Sbjct: 170 LEAALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVH 229
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI-----LGVLKKAKKASDLAALNQFHDG 192
L + ++ M ++ + ++I G +K A ++ + F DG
Sbjct: 230 ILGKARQFQSMVALIQEMGKEGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDG 289
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
+ + +L + + +G++ + + D + +LR Y L +
Sbjct: 290 VES-----------FNCLLVALAQEGLGREANQVFDRMRDRYA----PDLRSYTALMLAW 334
Query: 253 F---------RWVGE--HSGYKHNTITYN----GILRVLARHESVRDFWNVVEEMKKEGY 297
R E +G K + + +N G+LR R E+V+ F E MK +G
Sbjct: 335 CNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMF----ELMKAKGP 390
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
++ TY + R K M+ A++ FE M D +P V + LL + N + V
Sbjct: 391 APNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLL--VGYGNAKRMDRV 448
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ + G Y+ + + LT D+A ++ K M G EP TY+ ++
Sbjct: 449 TALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKS 508
Query: 418 LCKAGR-FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
GR + C V +EM G PD+ ++T+ I GH + A +M++K
Sbjct: 509 YFLGGRNYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKG 565
>gi|15228104|ref|NP_181260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75216851|sp|Q9ZUU3.1|PP190_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g37230
gi|4056478|gb|AAC98044.1| unknown protein [Arabidopsis thaliana]
gi|28973644|gb|AAO64144.1| unknown protein [Arabidopsis thaliana]
gi|110736716|dbj|BAF00321.1| hypothetical protein [Arabidopsis thaliana]
gi|330254276|gb|AEC09370.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 757
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 43/377 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ + D+ E + V VL + AL FFRW +H+ T+ +++
Sbjct: 100 WTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLE-HALQFFRWTERSGLIRHDRDTHMKMIK 158
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+L + ++ +M ++G D D ++ + + K +++++VK+F+ M D
Sbjct: 159 MLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD----- 213
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
LG + Y+ + + + + GR+ A++
Sbjct: 214 --------------------------------LGVERTIKSYNSLFKVILRRGRYMMAKR 241
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M + G EP TY+ +++G + R E A ++M+ G PD T+ +I G C
Sbjct: 242 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC 301
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
++D A F +M +I G+L+ RV+ ++ EM + P
Sbjct: 302 RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM-RSSGIEPNA 360
Query: 515 ATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
T+ TL+ L A ++ EA N+L+ +M K P F++ + SK G + A+E LK
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK 420
Query: 571 ALSVKEYPSSAAYLQVF 587
A++ P+ A + V
Sbjct: 421 AMATLNVPAEAGHYGVL 437
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 212/545 (38%), Gaps = 97/545 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + +L P+ H S+VY + E A FF W R + M++
Sbjct: 100 WTTRLQNSIRDLVPEWDH-SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIK 158
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L L M E +E+ ++ ++ KA G+V+E
Sbjct: 159 MLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKA--------------GIVQES 204
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL---SDNFVLTVLKELRIYPVKALGFFR 254
KI +K++D+ +E S N + V+ Y + F +
Sbjct: 205 V-------------------KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 255 WVGEHSGYKHNTITYN----GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
V E G + TYN G L ++R F E+MK G D T+ +
Sbjct: 246 MVSE--GVEPTRHTYNLMLWGFFLSLRLETALRFF----EDMKTRGISPDDATFNTMING 299
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F +F+ M++A KLF M PSV + +++ +++
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD-------------------- 339
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
R D+ ++ + M+++G EP+ TYS ++ GLC AG+ +A N+
Sbjct: 340 -----------------RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 431 LDEMEENGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
L M P D + L+ A ++ A M N A+A VLI
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQAT-------FKTLIEKLLGARRLEEAMNLLR-LMK 541
N A KLL +IEK + Q T + +IE L + +A L R LMK
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 542 K--QNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYE 598
+ Q+ ++ +K G + + E LK +S + P S AY + +S+ ++G +
Sbjct: 503 RGVQDQDAL-NNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 599 AKDLL 603
AK L
Sbjct: 562 AKTAL 566
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ S Y+ I L G+ +AE + + + G + D + +I G K G + + +
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L M G + + +LI+ + + E A M+E + D+ L +I
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 491 QKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
RV A ++++ MI+K V + ++E LL +EEA+ + L+ + +
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL 650
Query: 550 EPFVQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
+ + +S+ G A + L + LS+ E+ S Y +V ++ G+ A +L
Sbjct: 651 DSLLSVLSEKGKTIAALKLLDFGLERDLSL-EFSS---YDKVLDALLGAGKTLNAYSVLC 706
Query: 605 K 605
K
Sbjct: 707 K 707
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFE 425
G+ S++ + +L + GR A ++M M KN G E + ++++ L G E
Sbjct: 573 GHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVE 632
Query: 426 DACNVLDEMEENGCIPDIKTWTILI--QGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A +D + +NG D+ + ++ +G A AL +E++ + D
Sbjct: 633 EALGRIDLLNQNGHTADLDSLLSVLSEKGKTIA-----ALKLLDFGLERDLSLEFSSYDK 687
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+++ L + AY +L +++EK W+++ LI+ L ++A L R++KK
Sbjct: 688 VLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSS-DELIKSLNQEGNTKQADVLSRMIKK 745
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 169/410 (41%), Gaps = 70/410 (17%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL +F+ V + H T N +L L H V D V + M+K+ + +TY+
Sbjct: 102 PNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYL 161
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF------- 358
I + ++ ++ F + ++ +L + S GL++
Sbjct: 162 TIFKALS----IKGGIRQAPFALG-----KMRQAGFVLNAYSYN-----GLIYFLLQPGF 207
Query: 359 -----RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+V + S G S Y + AL + +++ M+ G P+ TY+
Sbjct: 208 CKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTI 267
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
I L +AGR +DA +L ME+ GC PD+ T+T+LI CAA ++D+A + KM +
Sbjct: 268 CIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASS 327
Query: 474 YDADADLLDVL------------INGFLSQKRVNG------AYKLLVE------------ 503
+ D L + F S+ +G Y +LVE
Sbjct: 328 HKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAF 387
Query: 504 -MIEKVRLR---PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
M++ +R+R P T+ TLI LL RRL+EA+ L M+ P +V +I +
Sbjct: 388 DMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYY 447
Query: 560 GTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDL 602
G + D KAL E PS AA S GR EAKD+
Sbjct: 448 GKLGDPE---KALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDI 494
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 171/383 (44%), Gaps = 25/383 (6%)
Query: 260 SGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
S +K + +TY ++ + E+V+ FW+ EM+ +GY D+ TY + K
Sbjct: 326 SSHKPDLVTYITLMSKFGNYGDLETVKRFWS---EMEADGYAPDVVTYTILVEALCKSGK 382
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ A + + M P++ + L+ + ++ D L + N ESLG + + Y
Sbjct: 383 VDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEAL--ELFNNMESLGVAPTAYSY 440
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
KLG ++A + MK G P + ++ L + GR +A ++ +++
Sbjct: 441 VLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHN 500
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+ ++++ + A ++D+A +M+ + + D +++ LI+ RV+
Sbjct: 501 CGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDE 560
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A+++ + + ++L P T+ LI L +L +A++L MK+ PP F +
Sbjct: 561 AWQMFGRL-KDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR-------HYEAKDLLYK 605
+ K V+ A + +++ P Y + EGR +++ K L
Sbjct: 620 DCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFL-- 677
Query: 606 CPHHIRQDSKISLLFGSAKSNKV 628
P H+ + +LL G K +V
Sbjct: 678 SPDHV---TLYTLLPGVVKDGRV 697
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 185/463 (39%), Gaps = 74/463 (15%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDN--DPEKASAFFNWVCDKKQFRPSSTVYSL 134
D + EL K+ S K + + ++ K N D E F++ + + + P Y++
Sbjct: 314 DKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM-EADGYAPDVVTYTI 372
Query: 135 MLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMV 194
++ L + Q + L M+ TY +++ L ++ + AL F++
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE--ALELFNN--- 427
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
+ VA T VL D+ K+G P KAL F
Sbjct: 428 --MESLGVAPTAYSYVLFIDYYGKLGD------------------------PEKALDTFE 461
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ + G + N L LA +R+ ++ ++ G D TY + + + K
Sbjct: 462 KM-KKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKA 520
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
++ A KL M+ + C PD+ +V NSL +
Sbjct: 521 GQIDKATKLLTEMLS-------EGCE-----------PDIIVV-----------NSLIDT 551
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y K GR DEA +M +K+ P +TY+ +I GL K G+ A ++ M
Sbjct: 552 LY--------KAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSM 603
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+E+GC P+ T+ L+ C + VD AL F +M N D + +I G + + R
Sbjct: 604 KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRA 663
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A+ +M K L P T TL+ ++ R+E+A+ ++
Sbjct: 664 GYAFWFYHQM--KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIV 704
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/509 (21%), Positives = 214/509 (42%), Gaps = 58/509 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA----- 180
P++ ++ +L L D++ RM +C + TY +I+ G++K+ +
Sbjct: 610 PNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWF 669
Query: 181 ---------SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD-------WDDKIGKKLE 224
D L G+VK+ +++ K +++ V S W + + L
Sbjct: 670 YHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILI 729
Query: 225 DMKIELS---------------DNFVLTVLKEL----RIYPVKAL--GFFRWVGEHSGYK 263
+ +IE + DN +L +++ L + K L F + +G H +
Sbjct: 730 EAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPE 789
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+G+L +++ F EMK G +I TY + K + +++ +L
Sbjct: 790 SYNCLMDGLLGCNITEAALKLFV----EMKNAGCCPNIFTYNLLLDAHGKSKRIDELFEL 845
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--VYDGIHR 381
+ M+ KP++ ++++ ++ N+ + L YE + S + Y +
Sbjct: 846 YNEMLCRGCKPNIITHNIIISALVKSNSINKALDLY----YEIISGDFSPTPCTYGPLIG 901
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K GR +EA K+ + M + +P+ Y+ +I G KAG AC++ M + G P
Sbjct: 902 GLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRP 961
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+K++TIL++ VD A+ F ++ D D +++ING +R+ A L
Sbjct: 962 DLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLF 1021
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SK 558
EM + + P T+ LI A +++A + ++ P + I SK
Sbjct: 1022 SEMKNR-GISPELYTYNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSK 1080
Query: 559 FGTVEDA-SEFLKALSVKEYPSSAAYLQV 586
G + A S F K + V P++ + Q+
Sbjct: 1081 SGNKDRAFSVFKKMMIVGCSPNAGTFAQL 1109
>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 107/488 (21%), Positives = 212/488 (43%), Gaps = 37/488 (7%)
Query: 90 SPKLTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
S LTH+ + V+ L ++ A +F W +FR +Y + L+ +L++
Sbjct: 93 SESLTHDQAITVVASLADEAGSMVALSFLYWAIGFPKFRHFMRLYIVSATALIGNKNLER 152
Query: 148 FWVTLR----------RMKEDHCYIEEETYLSILGVLKKAKKASDLA---ALNQFHDGMV 194
++ ++KE + E ++ + D+A L + + M
Sbjct: 153 ANEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMF 212
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLE-----DMKIE---LSDNFVLTVLKEL---R 243
E+ V+ V L +G+ LE + +E + DN T++ + +
Sbjct: 213 VEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQK 272
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
Y + +G+F W G N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 273 GYVNRVVGYF-WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYT 331
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISS---INNPDLGLVFR 359
+ + K E A +LF + + YKP+V + ++ +N ++ L
Sbjct: 332 HTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLL--- 388
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + G + + Y + K+G F A ++M M GF P+ TY+ +I GLC
Sbjct: 389 --SRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLC 446
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K G ++A +L+++ +G D T+TIL+ HC + +R+L+ F KM++ + D
Sbjct: 447 KKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIH 506
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
LI+ F QK++ + +L E + + L P + T+ ++I A+ L +
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVS-LGLIPTKKTYTSMICGYCRYGNTSLAVKLFQR 565
Query: 540 MKKQNYPP 547
M P
Sbjct: 566 MSNHGCAP 573
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 100/228 (43%), Gaps = 9/228 (3%)
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
+G + AE M M G PD +++ ++ C GR +A L+ M E G I D T
Sbjct: 202 MGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNAT 261
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
T++I C V+R + F KM+E + LING Q + A++LL EM+
Sbjct: 262 CTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMV 321
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYPPFPEPFVQYISKFGTVED 564
+ +P T TLI+ L E+A L L+L++ Y P + I+ + +
Sbjct: 322 RR-GWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDK 380
Query: 565 ASEFLKALSVKE----YPSSAAYLQVFESFFNEG---RHYEAKDLLYK 605
+ LS + P++ Y + + G R YE DL+ K
Sbjct: 381 LNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGK 428
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 99/240 (41%), Gaps = 4/240 (1%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A +GR EAE+ + AM GF DN T + +I C+ G +M E G P
Sbjct: 233 ACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAP 292
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ +T LI G C + +A +M+ + + + LI+G + A++L
Sbjct: 293 NVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLF 352
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SK 558
++++ +P T+ +I +L A LL M++Q P + I K
Sbjct: 353 LKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
G A E + + + + P+ Y + + +G EA LL K H Q ++
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 117/280 (41%), Gaps = 38/280 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN I+ L + S+ + + ++ ++ G + D TY + + +
Sbjct: 430 GFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRS 489
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M+ + P + + L+ + + R+ + SLG +K Y +
Sbjct: 490 LVFFNKMLKVGFTPDIHSYTTLISTFC--RQKQMKESERLFEEAVSLGLIPTKKTYTSMI 547
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G A K+ + M N G PD+ITY +I GLCK + +DA N+ D M + G
Sbjct: 548 CGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLS 607
Query: 441 PD--------------------------------IKTWTILIQGHCAANEVDRALLCFAK 468
P I+T L++ C+ ++D A L F K
Sbjct: 608 PCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQWIRTVNTLVRKLCSEGKLDMAALFFHK 667
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+++K + + V + GF+++ + Y L+ E+ E++
Sbjct: 668 LLDKEPNVN----RVTLLGFMNKCYESNKYGLVSELSERI 703
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 118/279 (42%), Gaps = 12/279 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ G NT TY ++ H V +F + +++ M KEG+ +I TY I K
Sbjct: 392 QEQGLVPNTNTYTTLID---GHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKK 448
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+++A +L + + ++L+ + + LVF NK +G +
Sbjct: 449 GSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVF--FNKMLKVGFTPDIH 506
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + + + E+E++ + + G P TY+ +I G C+ G A + M
Sbjct: 507 SYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRM 566
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+GC PD T+ LI G C +++D A + MM+K L + +
Sbjct: 567 SNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDS 626
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ A + +++++ R W T TL+ KL +L+ A
Sbjct: 627 STA----INVLDRLEKRQWIRTVNTLVRKLCSEGKLDMA 661
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 93/224 (41%), Gaps = 6/224 (2%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ EA M+ M+N G P T + V+ G E A N+ EM + G PD ++
Sbjct: 168 GKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSF 227
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+++ C V A M+E+ + D ++I+ F + VN +M+E
Sbjct: 228 KLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVE 287
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
+ L P F LI L +++A LL M ++ + P + + K G E
Sbjct: 288 -MGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346
Query: 564 DASE-FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
A FLK + Y P+ Y + + E + A+ LL +
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSR 390
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 140/315 (44%), Gaps = 6/315 (1%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
T +N IL L +++ ++ ++ + G D+ T + F + A +F
Sbjct: 61 TFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFA 120
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
++ Y P+ + L++ + L F +K + G L + Y + L K
Sbjct: 121 NILKRGYHPNAITLNTLIKGLCFCGEIKRALHFH--DKVVAQGFQLDQVSYGTLINGLCK 178
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G ++++ ++ +PD + Y+ +I LCK DAC++ EM G P++ T
Sbjct: 179 AGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFT 238
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+T LI G C + A +M KN + D ++LI+ + +++ A L EM
Sbjct: 239 YTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMK 298
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTV 562
K + P T+ +LI+ L LE A+ L + MK+Q P + + + K G +
Sbjct: 299 HK-NMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357
Query: 563 EDASEFLKALSVKEY 577
E+A +F + L VK Y
Sbjct: 358 ENAKQFFQHLLVKGY 372
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 130/280 (46%), Gaps = 3/280 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ++Y ++ L + + ++ +++ + D+ Y I K +++ DA
Sbjct: 161 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDA 220
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+ M+ P+V + L+ + N L F + N+ + + ++ +
Sbjct: 221 CDLYSEMIVKGISPNVFTYTTLIHGFCIMGN--LKEAFSLLNEMKLKNINPDVYTFNILI 278
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K G+ DEA + + MK+ P+ +TY+ +I GLCK E A + +M+E G
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ ++TIL+ C ++ A F ++ K Y + +V+ING L + + G
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING-LCKAGLFGDVMD 397
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L +E P TFKT+I LL ++A LR M
Sbjct: 398 LKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREM 437
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 110/254 (43%), Gaps = 2/254 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y I+ L +++ + D ++ EM +G ++ TY + F +
Sbjct: 193 EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNL 252
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L M P V ++L+ +++ D + K++++ ++ Y
Sbjct: 253 KEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIV--TYT 310
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K + A + K MK G +P+ +Y+ ++ LCK GR E+A +
Sbjct: 311 SLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVK 370
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +++T+ ++I G C A + +KM K +A +I L + + A
Sbjct: 371 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKA 430
Query: 498 YKLLVEMIEKVRLR 511
K L EMI + L+
Sbjct: 431 EKFLREMIARGLLK 444
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 84/205 (40%), Gaps = 11/205 (5%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P ++ ++ L K R+ ++ + E NG PD+ T +ILI C + A
Sbjct: 59 PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSV 118
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIE 522
FA ++++ Y +A L+ LI G G K + +KV + + Q ++ TLI
Sbjct: 119 FANILKRGYHPNAITLNTLIKGLC----FCGEIKRALHFHDKVVAQGFQLDQVSYGTLIN 174
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-P 578
L A + LLR ++ + P + + K + DA + + VK P
Sbjct: 175 GLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISP 234
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLL 603
+ Y + F G EA LL
Sbjct: 235 NVFTYTTLIHGFCIMGNLKEAFSLL 259
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 153/351 (43%), Gaps = 8/351 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + + ++G++ + D ++ + + DT K+
Sbjct: 48 ASAVFEAILEAKGAQRSDVYVFSGLITAYLESGFLHDALECFRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K + + ++ +++ Y S+ ++L+ ++ L V ++
Sbjct: 108 LEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFC--KEGEMRLAQSVFDEITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ EM NG +P+ T+T LI GHC +D A+ + +M+ + + D + LI G
Sbjct: 226 NELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A+ + M K+N
Sbjct: 286 LCKKGDLKQAQDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEG 594
+ IS G DA + L+ LSV P + Y + F +G
Sbjct: 345 DDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKG 395
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 100/247 (40%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M DA
Sbjct: 166 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYD 377
+LF M+ P+ + L+ + DL + Y+ + G S Y+
Sbjct: 226 NELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAM-----ETYKEMLRQGFSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C + A +M+ D ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ + S+ +EM ++G+ D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ + + L +R E++ L Y +
Sbjct: 295 AQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENI--RLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + G+ +AEKM++ M + G +PDN TY+ +I CK G + +L EM+ +G
Sbjct: 353 ISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGH 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPCVVT 418
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 160/425 (37%), Gaps = 104/425 (24%)
Query: 252 FFRWVGEHSGYKHNT-----------------------------------ITYNGILRVL 276
FF+W G++HNT TY ++R
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGF 62
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ E + N++ EMK G I T+ + R+ + + A+++F M+D KP
Sbjct: 63 CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122
Query: 337 QDCSLLLRSISSINNPDLG----------------LVFRV-------ANKYE-------- 365
++++ + IN DL + + V A K+E
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182
Query: 366 --SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP----------------- 406
S G+S Y + K GR D+A +M+ +K G P
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242
Query: 407 ----------------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
D I Y+ I GLCKAG+ ++A V +M E GC PD ++ ++I
Sbjct: 243 HDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
C N V A + ME+ + VL++G +RV A +L M+E
Sbjct: 303 YSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDR 362
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P T+ +I+ L A RL++A +L+ M++ P + I F G +++A E
Sbjct: 363 APSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARE 422
Query: 568 FLKAL 572
+ +
Sbjct: 423 LFQRM 427
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 186/433 (42%), Gaps = 23/433 (5%)
Query: 83 ENKLEELSPKL-THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
E K ++P + T S++ L +L N +KA F+ + D K +P + +Y++++ +L
Sbjct: 77 EMKAAGITPTIVTFGSLIRKLCEL-NFTDKALQIFHQMIDMK-VKPDAFLYTVVIGHLCK 134
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ L RM + C ++ TY ++ L KA K + F + + K + +
Sbjct: 135 INKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQI--FEEMLSKGHSPEL 192
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMK----------IELSDNFVLTVLKELRIYPVKALG 251
V T VV G +I + L M+ L + + K R + L
Sbjct: 193 V--TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL- 249
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F +G + I Y + L + + + V +M + G D +Y I
Sbjct: 250 -FEMA---AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSL 305
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + +A +L + M+ P V C++L+ + + V + E+ +
Sbjct: 306 CKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVI-LERMLETGDRAP 364
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S Y + L K R D+A +++ M+ AG PD +TY+ +I CK GR ++A +
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M E GC D+ + ILI+G+C A +VD A+ +M + + L +++G +
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484
Query: 492 KRVNGAYKLLVEM 504
RV A L+ +M
Sbjct: 485 SRVEEARLLMEKM 497
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 103/232 (44%), Gaps = 14/232 (6%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V DG HR EA ++ K F PD+ TY +I G CKA + A N+L EM
Sbjct: 28 VNDGCHR---------EAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G P I T+ LI+ C N D+AL F +M++ DA L V+I ++
Sbjct: 79 KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A M++ L P + T+ L+ L A + E+ + M + + P +
Sbjct: 139 DLAASYFERMVQSGCL-PDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYAT 197
Query: 555 YIS---KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
++ K G ++ A ++ L PS + Y + + RH EA++L
Sbjct: 198 VVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEAREL 249
>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 647
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 101/392 (25%), Positives = 167/392 (42%), Gaps = 51/392 (13%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS +FV +L+ EL+ P A+ FF W G+ Y HN Y ++ VLA + +
Sbjct: 104 IKLSPSFVSFILRSTELQTKPDVAIRFFTWAGKQKKYTHNLECYVSLIDVLATNGVLDSV 163
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+V + K+ G M + + + + F M+E+ + ++ M + +PS+
Sbjct: 164 KSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMKENGIEPSLFS------- 216
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
Y L N L S + + AE++ + M+N
Sbjct: 217 ------------------YNFLVNGLVNSKF------------IESAERVFEVMENGKIG 246
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G C+ G+ A L ME PD T+ LIQ A + D L
Sbjct: 247 PDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGL 306
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQ-KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ +M EK + + ++I G KRV G Y + MI K + A + LI+
Sbjct: 307 YHEMDEKGLEIPPHVYSLVIGGLCKDGKRVEG-YTVFENMISK-GCKANVAIYTALIDSN 364
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSA 581
+ EAM L + MKK+ P + V + K G +++A E+++ S K +A
Sbjct: 365 AKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNA 424
Query: 582 A-YLQVFESFFNEGRHYEAKDLLYK-----CP 607
Y + + GR EA+ + Y+ CP
Sbjct: 425 MFYSSLIDGLGKSGRVDEAERIFYEMVKKGCP 456
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 39/276 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N Y ++ A+ ++ + + + MKKEG E D TY I K +++A
Sbjct: 349 GCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEA 408
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ EF CS G +++ Y +
Sbjct: 409 LEYMEF------------CS-------------------------GKGVAVNAMFYSSLI 431
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR DEAE++ M G PD+ Y+ +I L K G+ ++A + ME +GC
Sbjct: 432 DGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCD 491
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+TILI G + + AL + M++K A L G +V A K+
Sbjct: 492 QTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKI 551
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
L EM + + P + F +I L A R++EA L
Sbjct: 552 LDEM-APMGVIP-ETAFDDMINILCKAGRIKEACKL 585
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 158/396 (39%), Gaps = 75/396 (18%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
E++ K E+ P + + V+ L K E + F N + K + + +Y+ ++ +
Sbjct: 309 EMDEKGLEIPPHV-YSLVIGGLCKDGKRVEGYTVFENMI--SKGCKANVAIYTALIDSNA 365
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
++ + + +RMK++ +E TY I+ L K+ + + +F G K +A
Sbjct: 366 KCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSG--KGVA-- 421
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
V+ + S D +GK +++ ++ ++K+
Sbjct: 422 ------VNAMFYSSLIDGLGK---SGRVDEAERIFYEMVKK------------------- 453
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMED 319
G ++ YN ++ LA+ + + + + M+ +G + + TY I I+ F++ R E+
Sbjct: 454 GCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFREHRN-EE 512
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ L++ M+D P+ A + +L L S
Sbjct: 513 ALTLWDLMIDKGITPT-------------------------AAAFRALSTGLCLS----- 542
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
G+ A K++ M G P+ + +I LCKAGR ++AC + D + + G
Sbjct: 543 -------GKVARACKILDEMAPMGVIPET-AFDDMINILCKAGRIKEACKLADGIVDRGR 594
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ T+LI A D AL + YD
Sbjct: 595 EIPGRVRTVLINALRKAGNADLALKLMRSKIGIGYD 630
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 163/378 (43%), Gaps = 9/378 (2%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK E+R P A FF W + Y HN Y ++ VLA + V
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ E++K + M + + + F K M+E+ + ++ M + +P++ + L+
Sbjct: 172 RFICSEIRKFEFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG 231
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ S D RV ES Y+ + + K G+ +A + ++ M+ G E
Sbjct: 232 LVSAMFVDSAE--RVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLE 289
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
D ITY +I F + EM+E G ++++I G C +++
Sbjct: 290 ADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAV 349
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F M+ K + + VLI+G+ V A +LL MI++ P T+ ++ L
Sbjct: 350 FENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDE-GFNPDVVTYSVVVNGLC 408
Query: 526 GARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSA 581
R+EEAM+ + + F + + K G V++A + +S K S
Sbjct: 409 KNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 582 AYLQVFESFFNEGRHYEA 599
Y + ++F G+ EA
Sbjct: 469 CYNALIDAFTKHGKVDEA 486
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 142/350 (40%), Gaps = 5/350 (1%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V E K + +TYN +++ + + + M+ +G E D TY+ + +
Sbjct: 247 VMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADS 306
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
V L++ M + + SL++ + + G + V G+ + ++
Sbjct: 307 DFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEG--YAVFENMIRKGSKPNVAI 364
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + K G ++A +++ M + GF PD +TYS V+ GLCK GR E+A +
Sbjct: 365 YTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCR 424
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
NG + ++ LI G A VD A F +M EK D+ + LI+ F +V+
Sbjct: 425 FNGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVD 484
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L M E+ T+ LI + R EEA+ L +M + P
Sbjct: 485 EALALFKRMEEEEGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRAL 544
Query: 556 ISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G V A + L L+ AA + + GR EA L
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKL 594
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE-GYEMDIDTY-IKISRQFQKFRMME 318
G ++ YN ++ +H V + + + M++E G + + TY I IS F++ R E
Sbjct: 462 GCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTILISGMFKEHRN-E 520
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISS--INNPDLGLVFRVANKYESLGNSLSKSVY 376
+A+KL++ M+D P+ + LR++S+ + + ++ ++ +G L +
Sbjct: 521 EALKLWDMMIDKGITPT----AACLRALSTGLCLSGKVARACKILDELAPMGVILDAACE 576
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
D I+ L K GR EA K+ + G E + +I L K G+
Sbjct: 577 DMIN-TLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKVGK 622
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 154/351 (43%), Gaps = 8/351 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFIRDAIEFFRLTREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFC--KEGEMRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + ++A
Sbjct: 166 GLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM +NG +P+ T+T LI GHC VD A+ + +++ + + D + LI G
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQARDLIDEMSMK-ELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEG 594
+ IS G DA + L+ LSV P + Y + F +G
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKG 395
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M++A
Sbjct: 166 GLRPSVVSFNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF M+D P+ + L+ N + L + + S G S Y+ +
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIDG--HCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M +PD ITY+ +I G CK G E A M +
Sbjct: 284 FGLCKKGDLKQARDLIDEMSMKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A M+ D ++IN F + V KL
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKL 403
Query: 501 LVEM 504
L EM
Sbjct: 404 LKEM 407
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++ V + +++ +G+ D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + L+ S DL F + L Y +
Sbjct: 295 ARDLIDEMSMKELKPDKITYTTLIDG--SCKEGDLETAFEYRKRMIKENIRLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M + G +PDN TY+ +I CK G + +L EM +G
Sbjct: 353 ISGLCQEGRSVDAEKMLRGMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGH 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPCVVT 418
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 140/296 (47%), Gaps = 5/296 (1%)
Query: 254 RWVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
R VG G + + +T+N ++ L + + D + +EM +EG D +Y + +
Sbjct: 211 RLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGY 270
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + +A+ +F M P V + L+ ++ N + + + G +
Sbjct: 271 CKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVAL--VGQMRERGLRM 328
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ + + + G D+A MK M+ +P + Y+ +I G CK GR ++A ++
Sbjct: 329 NEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELI 388
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EME G PD+ T++ ++ G+C + D A KM++K DA LI G +
Sbjct: 389 HEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEE 448
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+R+ A +L +M++ + L+P + T+ TLI+ +++A++L M K+ P
Sbjct: 449 RRLGDACELFEKMLQ-LGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLP 503
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 128/282 (45%), Gaps = 6/282 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A +L M+ P+V ++L+R++ + + L V + G + + Y
Sbjct: 135 LPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGV-VGDDMRGAGCAPNVVTY 193
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A + G D AE+++ M+ G P +T++ V+ GLCKAGR EDA + DEM
Sbjct: 194 NTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAR 253
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD ++ L+ G+C A + AL FA+M +K D LI+ +
Sbjct: 254 EGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLER 313
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A L+ +M E+ LR + TF LI+ L++A+ ++ M++ P + +
Sbjct: 314 AVALVGQMRER-GLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
K G +++A E + + K P Y + + G
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIG 414
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL F + + G + +T+ ++ + R ++ +V +M++ G M+ T+ +
Sbjct: 278 EALAVFAEMAQ-KGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F + ++DA+ + M + +PSV ++L+ + D + ++ E+
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDE--ARELIHEMEAK 394
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G Y I K+G D A ++ + M G PD ITYS +I GLC+ R DA
Sbjct: 395 GMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDA 454
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
C + ++M + G PD T+T LI GHC V +AL +M++K D VLI+G
Sbjct: 455 CELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDG 514
Query: 488 FLSQKRVNGAYKLLVEM 504
R A +LL ++
Sbjct: 515 LSKSARTKEAQRLLFKL 531
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 60/288 (20%), Positives = 110/288 (38%), Gaps = 34/288 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + +TY+ IL + + + +M K+G D TY + R + R +
Sbjct: 392 EAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRL 451
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--- 374
DA +LFE M+ +P + L+ N K SL + + K
Sbjct: 452 GDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGN---------VQKALSLHDEMIKKGVL 502
Query: 375 ----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y + L+K R EA++++ + PDNI Y + + C+ F+ +
Sbjct: 503 PDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKY-EALMHCCRTAEFKSVVAL 561
Query: 431 LDEMEENGCIP----------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
L G + D +++LI GHC + +AL +++ +
Sbjct: 562 LKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGF 621
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++ L+ G + A ++ E++ L + T K LI+
Sbjct: 622 SPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAE-TSKALID 668
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 193/475 (40%), Gaps = 34/475 (7%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV-DVV 210
L M+E C TY ++G L +A + + L + D K LV DV
Sbjct: 259 LFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMD-----------KKGLVADVF 307
Query: 211 LGSDWDDKIGK--KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW--VGEH------- 259
S D GK + + K+ L + F + Y GF R GE
Sbjct: 308 TYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEM 367
Query: 260 --SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
G K N TYN +++ + + + ++ EM G + D TY + + K +
Sbjct: 368 LARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNT 427
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVY 376
L M P+ C +++ + + D VF + SLG + +Y
Sbjct: 428 SRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEI---MVSLGVKPNAVIY 484
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + GRF EA +++K M G +PD + Y+ VI GLCK+ + E+A + L EM E
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ T+ LI G+C + E+ A F +M+ + + LI+G+ +
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A + M+ + + P T+ LI LL +L+ AM LL ++ P + I
Sbjct: 605 ATSIFRCMLGR-SVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSII 663
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCP 607
S F G + A + + + K P+ Y + G A++L P
Sbjct: 664 SGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 168/395 (42%), Gaps = 44/395 (11%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL------RVLARHESV 282
+LS + V +V+ + P + L FF WV G+ +++ + R+ +R +SV
Sbjct: 64 KLSPDVVHSVITKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSV 123
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQ-------KFRMMEDAVKLFEFMMDGPYKPS 335
N + M GY +D+ IK ++F + D +FE ++DG K
Sbjct: 124 ---VNQMIMMSSGGYSEILDSLIKSCKEFDLNNVNGNENSNNNDRGVVFELLIDGYKKKG 180
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ D ++ + N +GL+ +G+ L K + + +
Sbjct: 181 LFDEAVSFFLGAKRNGFVVGLL-----------------CCNGLLSDLLKANKLELFWRF 223
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M A D TY+ +I +AG ++ +L EMEE GC P + T+ ++I G C
Sbjct: 224 YNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCR 283
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A EVD A M +K AD +LI+GF QKR A +L EM K L+P
Sbjct: 284 AGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSK-GLKPGHV 342
Query: 516 TFKTLIEKLL------GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFL 569
+ LI+ + A R++E M L R +K + V+ + KFG +E A L
Sbjct: 343 AYTALIDGFMRQGDSGEAFRVKEEM-LARGVKLNLFT--YNALVKGVCKFGDMEKADALL 399
Query: 570 -KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + V P + Y + E + E KDLL
Sbjct: 400 NEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLL 434
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 158/380 (41%), Gaps = 39/380 (10%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V + G + + + YN ++ L + + + + + EM + G + ++ TY + + K
Sbjct: 506 VMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSG 565
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRS-----------------ISSINNPDL---- 354
M+ A + F+ M+ P+ C+ L+ + +PD+
Sbjct: 566 EMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYS 625
Query: 355 ----GLV--FRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNA 402
GL+ ++ E L L K + Y+ I K G +A ++ + M
Sbjct: 626 ALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQK 685
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G P+ ITY+ +I GLCKAG E A + D + G + T+ +I G+C + + +A
Sbjct: 686 GISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKA 745
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
F +M K D+ + LI+G + A L +E ++K ++ L++
Sbjct: 746 FRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKG--FASTSSLNALMD 803
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YP 578
+ ++ EA LL M ++ P + + Y K G +++A +F + + P
Sbjct: 804 GFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMP 863
Query: 579 SSAAYLQVFESFFNEGRHYE 598
++ Y + + GR E
Sbjct: 864 NALTYTALLSGYNMAGRRSE 883
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 133/317 (41%), Gaps = 7/317 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G N ITYN ++ L + + + + + +G + TY I + K +
Sbjct: 684 QKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLS 743
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A +LF+ M P S L+ N + L + + + S S +
Sbjct: 744 KAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA---STSSLNA 800
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G+ EA ++++ M + +PD++TY+ +I CK G ++A +M++
Sbjct: 801 LMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRN 860
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+ T+T L+ G+ A F +M+ K+ + D V+I+ L +
Sbjct: 861 LMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTL 920
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQY 555
KL+ +M++K + LI+ L + E + +L +++Q V+
Sbjct: 921 KLVDDMLKKGG-NVSKNVCHVLIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRC 979
Query: 556 ISKFGTVEDASEFLKAL 572
K G ++ A+ LK++
Sbjct: 980 FHKAGKMDGAARVLKSM 996
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 3/286 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ V + + EEM K G + DI TY + R ++DA
Sbjct: 518 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 577
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KL++ ++ +++ N + V + N+ S L+ VY+ I
Sbjct: 578 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIED--VENLFNELLSKKMELNSIVYNIII 635
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+A + G A ++++ MK+ G P+ TYS +I G+C G EDA +++DEM + G +
Sbjct: 636 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 695
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ +T LI G+C ++D A + +M+ N + V+I+G+ + A L
Sbjct: 696 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 755
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
L++M E + P T+ L A ++ A + M + P
Sbjct: 756 LIKMKES-GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLP 800
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ + G + + Y+ + G+ + ++ + M G +PD TY+ ++ GL
Sbjct: 509 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 568
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C G+ +DA + DE + +G I +I T+ I+++G+C AN ++ F +++ K + ++
Sbjct: 569 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 628
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +++I V A +LL M K L P AT+ +LI + +E+A +L+
Sbjct: 629 IVYNIIIKAHCQNGNVAAALQLLENMKSKGIL-PNCATYSSLIHGVCNIGLVEDAKHLID 687
Query: 539 LMKKQNYPPFPEPFVQYIS---KFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEG 594
M+K+ + P + I K G ++ A S +L+ +S +P+ Y + + + G
Sbjct: 688 EMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG 747
Query: 595 RHYEAKDLLYK 605
+A +LL K
Sbjct: 748 NMEKANNLLIK 758
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 155/347 (44%), Gaps = 17/347 (4%)
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+ +++ I Y S QF+ AV +F + PS++ C+ LL S+ N +
Sbjct: 172 QAFDLLIHVY---STQFRNLGF-SCAVDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEK 227
Query: 355 GL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
VFRV ++ G + + AL K G+ + A ++ M+ G P+ +TY+
Sbjct: 228 CCEVFRVMSE----GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 283
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GLC+ GR ++A + ++M G P++KT+ LI G N D+ +M+
Sbjct: 284 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMIGSG 343
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
++ + + + LI+G+ + GA K+ MI K + P T +L++ + ++E A
Sbjct: 344 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK-NITPTSVTLYSLMQGFCKSDQIEHA 402
Query: 534 MNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
N L + P+ V ++ K A F K + + + PS +
Sbjct: 403 ENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCG 462
Query: 590 FFNEGRHYEAKDLLYKCPHHIRQDSKIS---LLFGSAKSNKVTIPSR 633
+G+H EA +L ++ SK++ L+ G + K+ SR
Sbjct: 463 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 509
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG N TY ++ + + D N+ E+ + E++ Y I + + +
Sbjct: 587 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 646
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A++L E M P+ S L+ + +I GLV + + + G + Y
Sbjct: 647 ALQLLENMKSKGILPNCATYSSLIHGVCNI-----GLVEDAKHLIDEMRKEGFVPNVVCY 701
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ KLG+ D AE M + P+ TY+ +I G CK G E A N+L +M+E
Sbjct: 702 TALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKE 761
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+G +PD+ T+ +L G C AN++D A +M + D L++G+
Sbjct: 762 SGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 813
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 34/312 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TYN I+ L ++ + + + + E+M +G + ++ TY + K
Sbjct: 270 EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 329
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL--------------------- 356
+ + + M+ + P+V + L+ + N + L
Sbjct: 330 DKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 389
Query: 357 --VFRVANKYESLGNSLSKSVYDG--IH--------RALTKLGRFDEAEKMMKAMKNAGF 404
F +++ E N+L + + G IH L K R+ A + K M + F
Sbjct: 390 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 449
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P ++ + ++ GLCK G+ +A + + E G T LI G C A ++ A
Sbjct: 450 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 509
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M+E+ D + LI GF ++ +V G ++L EM ++ ++P T+ L+ L
Sbjct: 510 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR-GIQPDIYTYNFLLRGL 568
Query: 525 LGARRLEEAMNL 536
+L++A+ L
Sbjct: 569 CNVGKLDDAIKL 580
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 123/314 (39%), Gaps = 39/314 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T N +L L + V M EG D+ ++ + K ME+A++LF M
Sbjct: 211 TCNFLLSSLVKANEFEKCCEVFRVMS-EGACPDVFSFTNVINALCKGGKMENAIELFMKM 269
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
P+V + ++ + N L F + K G + Y + L KL
Sbjct: 270 EKLGISPNVVTYNCIINGLCQ--NGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLN 327
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
FD+ ++ M +GF P+ + ++ +I G CK G E A + D M P T
Sbjct: 328 FFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 387
Query: 448 ILIQGHCAANEVDRA------------------------LLC----------FAKMM-EK 472
L+QG C +++++ A LC F KMM +
Sbjct: 388 SLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSR 447
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
N+ LL +L+ G + A +L ++EK + T LI L GA +L E
Sbjct: 448 NFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGS-PASKVTSNALIHGLCGAGKLPE 506
Query: 533 AMNLLRLMKKQNYP 546
A +++ M ++ P
Sbjct: 507 ASRIVKEMLERGLP 520
>gi|449449535|ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 175/391 (44%), Gaps = 14/391 (3%)
Query: 221 KKLEDMKIE-LSDNFVLTVLKELRIYPVKALGFFRWVGEHS-GYKHNTITYNGILRVLAR 278
+ L ++I L+ V VL+ ++ FF W H+ Y+ T+ + +++ LAR
Sbjct: 60 RTLNKLRISNLNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLAR 119
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM---MDGPYKPS 335
W V+ +MK + ++ +T I +++ K ++++AV +F +D P
Sbjct: 120 TRKYTTMWKVLLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVE 179
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
V + L + + L+ R+ K G + K Y + G+ EA++
Sbjct: 180 VYNALLFALCEVKMFHGAYALIRRMIRK----GVTPDKKTYGTLVTGWCSAGKMKEAQEF 235
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
++ M GF P ++ GL AG E A +++ +M + G +PDI T+ LI C
Sbjct: 236 LEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDMVRKMTKEGSVPDIGTFNSLIDVICN 295
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ EVD + F ++ + D + +LI R++ A++LL IE + P+ +
Sbjct: 296 SGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEAFRLLHCCIEDGHV-PFPS 354
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
+ +++ + + ++A MK + +PP + I+ + G DA+ +L +
Sbjct: 355 LYGPILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAANYLMEM 414
Query: 573 S-VKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + P S + V + N G+H AK +
Sbjct: 415 AELGLPPISRCFDMVTDGLKNCGKHDLAKKI 445
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 84/397 (21%), Positives = 159/397 (40%), Gaps = 47/397 (11%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCD-KKQFRPSSTVYSLMLRNLVNKDSLKQFWVT 151
L E V VLR N ++ FFNW C ++P++ + +++ L W
Sbjct: 70 LNSELVFRVLRACSNSGTESFRFFNWACSHNPSYQPTTLEFEELVKTLARTRKYTTMWKV 129
Query: 152 LRRMKEDHCYIEEETYLSIL-------------GVLKKAKKASDLAALNQFHDGM---VK 195
L +MK + I ET I+ + + K+ D + ++ + +
Sbjct: 130 LLQMKTQNLKISPETISFIIQEYGKQGLVDNAVTIFNQCSKSIDCPQTVEVYNALLFALC 189
Query: 196 EIAMDNVAKTLVDVVL--GSDWDDKIGKKL-----EDMKIELSDNFVLTVLKELRIYPVK 248
E+ M + A L+ ++ G D K L K++ + F+ + ++ P++
Sbjct: 190 EVKMFHGAYALIRRMIRKGVTPDKKTYGTLVTGWCSAGKMKEAQEFLEEMSQKGFNPPLR 249
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
++GY ES +D +V +M KEG DI T+ +
Sbjct: 250 GRDLLVEGLLNAGYL----------------ESAKD---MVRKMTKEGSVPDIGTFNSLI 290
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
++ + +F + P + +L+ + S + D FR+ + G
Sbjct: 291 DVICNSGEVDFCINIFHEVCKLGLCPDINTYKILIPATSKVGRIDEA--FRLLHCCIEDG 348
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ S+Y I + + K G+FD+A MK+ G P+ Y+ +I + GRF DA
Sbjct: 349 HVPFPSLYGPILKGMCKRGQFDDAFCFFGDMKHKGHPPNRPVYTMLITMCGRGGRFVDAA 408
Query: 429 NVLDEMEENGCIPDIKTWTILIQG--HCAANEVDRAL 463
N L EM E G P + + ++ G +C +++ + +
Sbjct: 409 NYLMEMAELGLPPISRCFDMVTDGLKNCGKHDLAKKI 445
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYTLTREHKLWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 108 LEHLMKLKYFKLVWGFYEDILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 286 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G ++ LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 404
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 102/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 281 TLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + J ++G++ +RD + + + DT K+
Sbjct: 54 ASAVFAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ J V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRJAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I G CK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ +T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQAHHLIDEMSXK-GLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 232 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 286
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 287 TLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQE 346
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ DA ++IN F + V
Sbjct: 347 NXRLDXVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 406
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 407 SKLLKEM 413
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDXAFEHXKRMIQENXRLDXVXYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 XEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 27/390 (6%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW- 286
+ LS N EL I P F+ + YK T+ R++ + + R+F
Sbjct: 55 LPLSSNSTPDAQNELSISP----QIFKSRPQFGSYKLGDATF---YRLIENYATSREFHF 107
Query: 287 --NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLL 343
V++ MK+EG + +I I + K + +AV F M + + K +V+ + +L
Sbjct: 108 IHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVL 167
Query: 344 RSISSINNPDLGLVFRV------ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
I I D F+ AN N L+ Y+ I +AL KLG+ D A +
Sbjct: 168 NVI--IQEGDFSYAFKFYLHVFGANSKGFQPNLLT---YNLIIKALCKLGQIDRAVDTFR 222
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M PD TYS ++ GLCK R ++A +LDEM+ GC+P+ T+ +LI
Sbjct: 223 EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 282
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++ RA M K + + LI+G + +++ A LL +M+ + P Q T+
Sbjct: 283 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS-KCVPNQVTY 341
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSV 574
T+I L+ RR E+ +++L M+++ + IS K G E+A K ++
Sbjct: 342 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 401
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
K P+ Y + + + EA+D+L
Sbjct: 402 KGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 431
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 130/286 (45%), Gaps = 3/286 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G N +T+N ++ L+++ + +V+ M +G + TY + +
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 319
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A+ L E M+ P+ ++ + + G+ + E G ++ +Y
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV--HILMSMEERGQKANEYIYS 377
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G+ + A ++ K M G +P+ + Y I GLC+ + ++A ++L EM
Sbjct: 378 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 437
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P+ T++ L++G + +A+L + +MM ++ + VL+NG R+ A
Sbjct: 438 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 497
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ M+ + L+P + ++I+ L +++ + L M+ Q
Sbjct: 498 LTVWTHMLGE-GLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 169/415 (40%), Gaps = 59/415 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+ ++ L K L + L +M C + TY +I+ L K ++A
Sbjct: 301 PNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA------ 354
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
DG+ ++M+ + + + + I ++ K E
Sbjct: 355 ---EDGVHILMSMEERGQKANEYI----YSSLISGLFKEGKSE----------------- 390
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A+ ++ + E G K N + Y + L R E + ++++EM +G+ + TY
Sbjct: 391 -NAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 448
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + F K + A+ +++ MM + +V CS+LL + L
Sbjct: 449 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT----HM 504
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK--NAGFEPDNITYSQVIFGLCKAG 422
LG L V Y + + L +G D+ K+ M+ PD +TY+ + LC+
Sbjct: 505 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 564
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-NYDADADL- 480
A ++L+ M + GC PD T I ++ + E+ N D L
Sbjct: 565 NLTRAIDLLNSMLDEGCDPDSLTCNIFLE----------------TLRERINPPQDGRLF 608
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
LD L+ L ++R A +++ EM+ + L P +T+ +I++ +R+ E ++
Sbjct: 609 LDELVVRLLKRERKLSALRIVEEMLLRF-LPPEPSTWSRVIQRTCKPKRIRETID 662
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 27/390 (6%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW- 286
+ LS N EL I P F+ + YK T+ R++ + + R+F
Sbjct: 31 LPLSSNSTPDAQNELSISP----QIFKSRPQFGSYKLGDATF---YRLIENYATSREFHF 83
Query: 287 --NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLL 343
V++ MK+EG + +I I + K + +AV F M + + K +V+ + +L
Sbjct: 84 IHQVLDRMKREGRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVL 143
Query: 344 RSISSINNPDLGLVFRV------ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
I I D F+ AN N L+ Y+ I +AL KLG+ D A +
Sbjct: 144 NVI--IQEGDFSYAFKFYLHVFGANSKGFQPNLLT---YNLIIKALCKLGQIDRAVDTFR 198
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M PD TYS ++ GLCK R ++A +LDEM+ GC+P+ T+ +LI
Sbjct: 199 EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNG 258
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++ RA M K + + LI+G + +++ A LL +M+ + P Q T+
Sbjct: 259 DLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSS-KCVPNQVTY 317
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSV 574
T+I L+ RR E+ +++L M+++ + IS K G E+A K ++
Sbjct: 318 GTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAE 377
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
K P+ Y + + + EA+D+L
Sbjct: 378 KGCKPNVVVYGAFIDGLCRDEKPDEAEDIL 407
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 130/286 (45%), Gaps = 3/286 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G N +T+N ++ L+++ + +V+ M +G + TY + +
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 295
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A+ L E M+ P+ ++ + + G+ + E G ++ +Y
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGV--HILMSMEERGQKANEYIYS 353
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G+ + A ++ K M G +P+ + Y I GLC+ + ++A ++L EM
Sbjct: 354 SLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSK 413
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P+ T++ L++G + +A+L + +MM ++ + VL+NG R+ A
Sbjct: 414 GFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREA 473
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ M+ + L+P + ++I+ L +++ + L M+ Q
Sbjct: 474 LTVWTHMLGE-GLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQ 518
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 169/415 (40%), Gaps = 59/415 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+ ++ L K L + L +M C + TY +I+ L K ++A
Sbjct: 277 PNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRA------ 330
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
DG+ ++M+ + + + + I ++ K E
Sbjct: 331 ---EDGVHILMSMEERGQKANEYI----YSSLISGLFKEGKSE----------------- 366
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A+ ++ + E G K N + Y + L R E + ++++EM +G+ + TY
Sbjct: 367 -NAVRLWKEMAE-KGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSS 424
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + F K + A+ +++ MM + +V CS+LL + L
Sbjct: 425 LMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWT----HM 480
Query: 367 LGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK--NAGFEPDNITYSQVIFGLCKAG 422
LG L V Y + + L +G D+ K+ M+ PD +TY+ + LC+
Sbjct: 481 LGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQD 540
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK-NYDADADL- 480
A ++L+ M + GC PD T I ++ + E+ N D L
Sbjct: 541 NLTRAIDLLNSMLDEGCDPDSLTCNIFLE----------------TLRERINPPQDGRLF 584
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
LD L+ L ++R A +++ EM+ + L P +T+ +I++ +R+ E ++
Sbjct: 585 LDELVVRLLKRERKLSALRIVEEMLLRF-LPPEPSTWSRVIQRTCKPKRIRETID 638
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 166/353 (47%), Gaps = 23/353 (6%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRM 316
E G N + YN I+ R D +VE+M++EG DI T+ +IS ++ ++
Sbjct: 209 ESFGVLPNKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 317 MEDAVKLFEFM-MD---GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS-- 370
+ DA ++F M +D G +P+ +L+L+ + GL+ +ES+ +
Sbjct: 269 L-DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-----GLLEDAKTLFESIRENDD 322
Query: 371 -LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+S Y+ + L + G+F EAE ++K M + G P +Y+ ++ GLCK G DA
Sbjct: 323 LVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ M+ NG PD T+ L+ G+C+ +VD A +MM N +A ++L++
Sbjct: 383 IVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ R++ A +LL +M EK T +++ L G+ L++A+ +++ M+
Sbjct: 443 NMGRISEAEELLRKMNEK-GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
YI G V+D+ + P Y + GR EAK L
Sbjct: 502 NLGNSYI---GLVDDS-----LIENNCLPDLITYSTLLNGLCKAGRFAEAKTL 546
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 148/335 (44%), Gaps = 31/335 (9%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+YN L+ L RH + V+++M +G I +Y + K M+ DA + M
Sbjct: 328 SYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLM 387
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
P LL S+ D + + + L N+ + ++ + +L +
Sbjct: 388 KRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI---LLHSLWNM 444
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL--------------- 431
GR EAE++++ M G+ D +T + ++ GLC +G + A ++
Sbjct: 445 GRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLG 504
Query: 432 --------DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
D + EN C+PD+ T++ L+ G C A A FA+MM + D+ ++
Sbjct: 505 NSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNI 564
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
I+ F Q +++ A+++L +M EK T+ +LI L ++ E L+ M+++
Sbjct: 565 FIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREK 623
Query: 544 NYPPFPEPF---VQYISKFGTVEDASEFLKALSVK 575
P + +QY+ + G VEDA+ L + K
Sbjct: 624 GISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQK 658
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 156/345 (45%), Gaps = 11/345 (3%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN +L R V + ++M G + T+ + R ++ A +LF+ M
Sbjct: 115 YNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMP 174
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ KP+ +L+R D GL + N ES G +K VY+ I + + GR
Sbjct: 175 EKGCKPNEFTFGILVRGYCKAGLTDKGL--ELLNSMESFGVLPNKVVYNTIVSSFCREGR 232
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI----PDIK 444
D++EK+++ M+ G PD +T++ I LCK G+ DA + +ME + + P+
Sbjct: 233 NDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSI 292
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ ++++G C ++ A F + E + ++ + G + + A +L +M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
I+K + P ++ L++ L L +A ++ LMK+ P + + + G
Sbjct: 353 IDK-GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGK 411
Query: 562 VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V+ A L+ + P++ + S +N GR EA++LL K
Sbjct: 412 VDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRK 456
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 138/402 (34%), Gaps = 95/402 (23%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +YN ++ L + + D +V MK+ G D TY + + ++ A
Sbjct: 356 GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAA 415
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSI-------------SSINNPDLGLVFRVAN----- 362
L + MM P+ C++LL S+ +N GL N
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475
Query: 363 -----------------------KYESLGNSLSKSV---------------YDGIHRALT 384
+LGNS V Y + L
Sbjct: 476 LCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC 535
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GRF EA+ + M +PD++ Y+ I CK G+ A VL +ME+ GC ++
Sbjct: 536 KAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI G N++ I+G + + R G
Sbjct: 596 TYNSLILGLGIKNQIFE-----------------------IHGLMDEMREKG-------- 624
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
+ P T+ T I+ L ++E+A NLL M ++N P F I F V D
Sbjct: 625 -----ISPNICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPD 679
Query: 565 ---ASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
A E + Y +F G+ +A +LL
Sbjct: 680 FDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELL 721
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 112/275 (40%), Gaps = 13/275 (4%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ TY + K +A LF MM +P ++ + + FR
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCK--QGKISSAFR 580
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
V E G S Y+ + L + E +M M+ G P+ TY+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ G+ EDA N+LDEM + P++ ++ LI C + D A F + +
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG- 699
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ-ATF--KTLIEKLLGARRLEEAMNL 536
L ++ N L+ ++ A E++E V R ++ TF K L+ L LE A +
Sbjct: 700 LYSLMFNELLAAGQLLKA----TELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGI 755
Query: 537 LRLMKKQNY---PPFPEPFVQYISKFGTVEDASEF 568
L M + Y P P + + K G ++A+ F
Sbjct: 756 LHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNF 790
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + TYN ++ L + + +++EM+++G +I TY + + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLCEGGKV 645
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA L + MM P+V L+ + + PD + V S+ + +Y
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIGAFCKV--PDFDMAQEVFETAVSICGQ-KEGLYS 702
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L G+ +A ++++A+ + GFE Y ++ LCK E A +L +M +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGILHKMIDK 762
Query: 438 G 438
G
Sbjct: 763 G 763
>gi|224144668|ref|XP_002325369.1| predicted protein [Populus trichocarpa]
gi|222862244|gb|EEE99750.1| predicted protein [Populus trichocarpa]
Length = 422
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 170/392 (43%), Gaps = 17/392 (4%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L + + ++ V VL+ P ++L FF W S Y TI Y ++ L R++
Sbjct: 29 RTLNKLNLPITSELVFRVLRACSNSPSESLRFFNWA--RSYYSPTTIEYEELIITLVRNK 86
Query: 281 SVRDFWNVVEEMK---KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM---MDGPYKP 334
W ++ ++K + + + DT I ++ K +++ AV++F ++ +
Sbjct: 87 KYASMWKLIAQVKDNLGDKFSVSSDTVCSIIEEYGKHGLIDQAVEVFNKCSRSLNCQHNV 146
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
V + L + + LV R+ K G K Y + G+ EA+
Sbjct: 147 CVYNSLLFALCEVKMFHGAYALVRRMIRK----GIVPDKRTYGVLVNGWCSSGKLREAKG 202
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M GF P +I GL AG E A +++ M + G +PD+ T+ +++ C
Sbjct: 203 FLEEMSKKGFNPPVRGRDLLIEGLLNAGYLESAKDMVRRMMKEGLVPDVNTFNSMVEAIC 262
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
A EVD + + + + + D + +LI R++ A++LL +IE +P+
Sbjct: 263 NAGEVDFCVDMYHSVCKLGFCPDINSYKILIPAVSKVGRIDEAFRLLHNLIEDGH-KPFP 321
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT----VEDASEFLK 570
+ + +I+ + + ++A MK + +PP + I+ G VE A+ ++
Sbjct: 322 SLYAPIIKGMFRRGQFDDAFCFFSEMKVKGHPPNRPVYTMMITMCGRGGKHVEAANYLVE 381
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ P S + V + N G+H AK +
Sbjct: 382 MTEIGLVPISRCFDMVTDGLKNCGKHDLAKRI 413
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 87/409 (21%), Positives = 170/409 (41%), Gaps = 51/409 (12%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E L +L+ +T E V VLR N P ++ FFNW + + P++ Y ++ LV
Sbjct: 28 ERTLNKLNLPITSELVFRVLRACSNSPSESLRFFNWA--RSYYSPTTIEYEELIITLVRN 85
Query: 143 DSLKQFWVTLRRMKE---DHCYIEEETYLSIL------GVLKKAKKASDLA--ALNQFHD 191
W + ++K+ D + +T SI+ G++ +A + + +LN H+
Sbjct: 86 KKYASMWKLIAQVKDNLGDKFSVSSDTVCSIIEEYGKHGLIDQAVEVFNKCSRSLNCQHN 145
Query: 192 GMVK--------EIAMDNVAKTLVDVVL--GSDWDDK-----IGKKLEDMKIELSDNFVL 236
V E+ M + A LV ++ G D + + K+ + F+
Sbjct: 146 VCVYNSLLFALCEVKMFHGAYALVRRMIRKGIVPDKRTYGVLVNGWCSSGKLREAKGFLE 205
Query: 237 TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
+ K+ PV+ ++GY ES +D +V M KEG
Sbjct: 206 EMSKKGFNPPVRGRDLLIEGLLNAGYL----------------ESAKD---MVRRMMKEG 246
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D++T+ + ++ V ++ + + P + +L+ ++S + D
Sbjct: 247 LVPDVNTFNSMVEAICNAGEVDFCVDMYHSVCKLGFCPDINSYKILIPAVSKVGRIDEA- 305
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
FR+ + G+ S+Y I + + + G+FD+A MK G P+ Y+ +I
Sbjct: 306 -FRLLHNLIEDGHKPFPSLYAPIIKGMFRRGQFDDAFCFFSEMKVKGHPPNRPVYTMMIT 364
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG--HCAANEVDRAL 463
+ G+ +A N L EM E G +P + + ++ G +C +++ + +
Sbjct: 365 MCGRGGKHVEAANYLVEMTEIGLVPISRCFDMVTDGLKNCGKHDLAKRI 413
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/500 (22%), Positives = 201/500 (40%), Gaps = 80/500 (16%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ P + ++++++ L L+ R+M + H + TY ++ L KA + D
Sbjct: 109 RGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLRD 167
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A+ + + DN T+V L +G +++D + EL + +
Sbjct: 168 --AVQVLQEMVSARHVPDNTTLTVVVQSL------CLGDRVDDAR-ELVEEML------- 211
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV-EEMKKEGYEMDI 301
H G N ITY+ ++ L + E + + ++ E+ + G+ DI
Sbjct: 212 ----------------HRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDI 255
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + K + DAV +FE M P + SL+ D+ R+
Sbjct: 256 VTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYN--SLI---GGYCRAGDMDEAIRLL 310
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K + Y + A K+GR D+A ++ + M PD +T++ ++ GLC
Sbjct: 311 GKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 370
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
GR EDA +L+E+ GC P I T+ ++ G+C +N+V +A A + + +
Sbjct: 371 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTY 430
Query: 482 DVLING------------FLSQ-------------------------KRVNGAYKLLVEM 504
++L+ G +L Q R + A + EM
Sbjct: 431 NILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEM 490
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGT 561
I++ + P ATF T++ L A + ++A LL M K + P P + V + G
Sbjct: 491 IQRGYV-PAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGM 549
Query: 562 VEDASEFLKALSVKEYPSSA 581
++ A E L + SS+
Sbjct: 550 IQKADELASELRLYTDKSSS 569
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 176/412 (42%), Gaps = 50/412 (12%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVV-EEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+GY ++ T+ +LR L +R ++ +E++ G D I + R
Sbjct: 4 AGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTT 63
Query: 319 DAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M + G + + + + + +GL+ + ++ + G L V
Sbjct: 64 TAMALFDKMAELGAVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVIG 123
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G+ RA GR A + + M +A PD +TY++++ GL KAGR DA VL EM
Sbjct: 124 GLCRA----GRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+PD T T+++Q C + VD A +M+ + A+A L++G +R++ A
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL--------------------------- 530
LL+ + + P T+ T+I+ L A RL
Sbjct: 239 VALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYC 298
Query: 531 -----EEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSA 581
+EA+ LL M N P + +S F G ++DA E F + ++ K P
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVV 358
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK-----CPHHIRQDSKISLLFGSAKSNKV 628
+ + + EGR +A +LL + CP I + + + G KSN+V
Sbjct: 359 TFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV--VDGYCKSNQV 408
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 220/526 (41%), Gaps = 80/526 (15%)
Query: 88 ELSPK---LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
E +PK ++HES V ++++ + DP++A FN +K F ++ YS++L NLV
Sbjct: 47 ETNPKTKFISHESTVSLMKR-ERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKK 105
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
L +MK + C +E +L+++ + + + + + N
Sbjct: 106 FLAVDAILHQMKYETCRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAIS 165
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
T +++++ S +++L+ +L L + P
Sbjct: 166 TCLNLLIDSG------------EVDLARKLLLYAKHNLALQP------------------ 195
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEG--YEMDIDTYIKISRQFQKFRMMEDAVK 322
NT +N +++ ++ + + VVEEMK+ G Y I + F + R E AV+
Sbjct: 196 NTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKE-AVE 254
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
LFE M+ R IS PD ++F V + +G R+
Sbjct: 255 LFEDMISK-------------RGIS----PD-PVIFNV--------------MINGFCRS 282
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
G + A+ ++ MK G P+ YS ++ G CK G+ ++A V DE+++ G D
Sbjct: 283 ----GEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLD 338
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+T L+ C E+D A+ +M ADA +V++ G S+ R A ++L
Sbjct: 339 TVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLD 398
Query: 503 EM-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
+ E V L + +++ ++ L LE+A+ L +M K+ P + + + +
Sbjct: 399 QWGCEGVHLN--KGSYRIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCE 456
Query: 560 -GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G E L L + P+ ++ V ES E + +LL
Sbjct: 457 SGNTEIGVRVLIGFLGIGLIPAPKSWGAVVESICKERKLVHVFELL 502
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 169/410 (41%), Gaps = 44/410 (10%)
Query: 253 FRWVGEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
V E SG Y YNGI+ L R V D + V+E+M +E ++ TY +
Sbjct: 74 LELVRELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGL 133
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ + A ++F+ M KP+ L++ +S D L RV + SL
Sbjct: 134 CRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL--RVMIEQRSLELPT 191
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG-------------- 417
I L K R D+A K M+ M+ G P+ +TYS ++ G
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 418 ----------------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
LCKAG + A ++E+ ++G +PD+ T+++LI
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A + D +L M D LIN +++ A++LL E++E P
Sbjct: 312 AGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL-ELMEAAGSPPNVV 370
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
T+ ++++ L + +++E + +M K P + + +SK G ++ A + + +
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELI 430
Query: 573 -SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFG 621
S +E P +AAY V S G+ EA + + + D+ L G
Sbjct: 431 KSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAG 480
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 13/242 (5%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG + +TY+ ++ AR ++E+M++ G + D+ TY + K R +
Sbjct: 292 QSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQ 351
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---V 375
DA +L E M P+V + ++ + D V RV YE + S
Sbjct: 352 DAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMD--EVHRV---YEMMLKSRCSPDVVT 406
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L+K G D A K+ + +K++ PD YS VI LC+AG+ E+AC + ME
Sbjct: 407 YSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Query: 436 ENGCIPDI-KTWTILIQGHCAANEVDRALLCFAKMMEKNY----DADADLLDVLINGFLS 490
+I + L+ C A D A E+ + D DL ++ + L
Sbjct: 467 VTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHRVTKSGDTDLAKIVEDHLLE 526
Query: 491 QK 492
K
Sbjct: 527 SK 528
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + K V DG+ A G ++A ++++ + + P Y+ +I GLC+A R DA
Sbjct: 53 GETTYKLVVDGLCGA----GMANQALELVRELSGV-YTPTVFIYNGIITGLCRASRVMDA 107
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL++M E +P++ T+TIL+ G C +N+ A F +M + LI
Sbjct: 108 YKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH 167
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ A ++++E + L T T++ L A RL++A+ + M++ P
Sbjct: 168 LSRAGEIDEALRVMIEQ-RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226
Query: 548 FPEPFVQYISKF 559
+ + F
Sbjct: 227 NEVTYSNLVHGF 238
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC-IPDIKTW 446
+F E ++ + + G TY V+ GLC AG A ++ E+ +G P + +
Sbjct: 34 KFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTVFIY 91
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I G C A+ V A KM+E++ + +L+NG + A ++ EM +
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM-K 150
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+ +P T+ TLI+ L A ++EA LR+M +Q P + + G + AS
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEA---LRVMIEQRSLELPTDVITCTTIVGGLCKAS 207
Query: 567 EFLKALSVKE-------YPSSAAYLQVFESFFNEG 594
AL E P+ Y + F G
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 1/146 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N +TYN ++ L + + + V E M K D+ TY I K M+
Sbjct: 361 EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGML 420
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ AVKLFE + P S+++ S+ + + G+++ +++
Sbjct: 421 DSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALA- 479
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAG 403
G+ AL R D A ++++ + G
Sbjct: 480 GLVAALCDAKRTDSARRIVEVARERG 505
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 127/294 (43%), Gaps = 14/294 (4%)
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+V G + T+N ++ + + D ++ EM + G D TY + F
Sbjct: 378 YVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLV 437
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ A+ L + M+ P + C+ LL + +N L + + L S
Sbjct: 438 GDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDALEMFKAMQKSKMDLDAS 495
Query: 375 -----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y+ + L G+F EAE++ K M + G P+ ITYS +I GLCK R
Sbjct: 496 RPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSR 555
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A + D M PD+ T+ L+ G+C A VD L F +M + ADA
Sbjct: 556 LDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYIT 615
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
LI+GF +NGA + EMI + P T ++++ L L+ A+ +L
Sbjct: 616 LIHGFRKVGNINGALDIFQEMISS-GVYPDTITIRSMLTVLWSKEELKRAVAML 668
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 145/362 (40%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S K N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F +A +L + M++ P+V
Sbjct: 290 MIDGFCSSGRWSEAQRLLQEMLERKINPNV------------------------------ 319
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y + A K +F EAE++ M G P+ ITY+ +I G CK R +
Sbjct: 320 -------VTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDA 372
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC PD+ T+ LI G+C A +D +M E AD + LI+
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A L +MI + P T TL++ L +L++A+ + + M+K
Sbjct: 433 GFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK---- 487
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
SK DAS + P Y + NEG+ EA++L +
Sbjct: 488 ----------SKMDL--DASRPFNGVE----PDVQTYNILISGLINEGKFLEAEELYKEM 531
Query: 607 PH 608
PH
Sbjct: 532 PH 533
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 131/304 (43%), Gaps = 14/304 (4%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D + L+ + + PDL V + K
Sbjct: 46 LKLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDL--VISLYQKM 103
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E ++ + + + A + GF+PD +T+S ++ GLC R
Sbjct: 104 ERKQIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRV 163
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A ++ +M C P++ T+T L+ G C V A+ +M+E + +
Sbjct: 164 SEALDLFHQM----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 219
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E ++P + +I+ L R +A NL M+++
Sbjct: 220 VDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKG 279
Query: 545 YPPFPEPF-----VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYE 598
FP+ F + G +A L+ L K P+ Y + ++ E + +E
Sbjct: 280 I--FPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337
Query: 599 AKDL 602
A++L
Sbjct: 338 AEEL 341
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 131/298 (43%), Gaps = 12/298 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ I +N ++ V+ R E ++ ++M+++ D+ ++ + + F + A+ F
Sbjct: 76 SVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNILIKCFCSCSKLPFALSTF 135
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRA 382
+ ++P V S LL + + RV+ + +V + +
Sbjct: 136 GKITKLGFQPDVVTFSTLLHGLCVED--------RVSEALDLFHQMCRPNVVTFTTLMNG 187
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI-P 441
L + GR EA ++ M G +P+ ITY ++ G+CK G A N+L +MEE I P
Sbjct: 188 LCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKP 247
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ ++ +I G A + +M EK D + +I+GF S R + A +LL
Sbjct: 248 NVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLL 307
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
EM+E+ ++ P T+ LI + R+ EA L M + P + I F
Sbjct: 308 QEMLER-KINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 19/259 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G +T TYN ++ + ++ ++M G DI T + ++D
Sbjct: 418 TGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKD 477
Query: 320 AVKLFEFM----MD----GPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
A+++F+ M MD P+ +P VQ ++L+ + IN G Y+ +
Sbjct: 478 ALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGL--INE---GKFLEAEELYKEMP 532
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y + L K R DEA +M +M + F PD +T++ ++ G CKAGR +
Sbjct: 533 HRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVD 592
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D + EM G + D T+ LI G ++ AL F +M+ D + ++
Sbjct: 593 DGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSML 652
Query: 486 NGFLSQKRVNGAYKLLVEM 504
S++ + A +L ++
Sbjct: 653 TVLWSKEELKRAVAMLEDL 671
>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
Length = 769
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 147/332 (44%), Gaps = 7/332 (2%)
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
G+D+D K + L + L+D+ V+ VL +R P FF W GY H Y+
Sbjct: 84 FGADFDGKAERVLRRCRGFLTDSVVVAVLGAVRDAPELCARFFLWAERQVGYSHTGACYD 143
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
+ L RD ++ E+ +E E+ + R+ + M +A++ + D
Sbjct: 144 ALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDF 203
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
Y+PS + L++ +SS DLG FRV + G + + AL K GR+
Sbjct: 204 GYRPSKVTYNALVQVLSSAGQVDLG--FRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A M++ F+ D + + +I GL +A F++A + L M N CIP++ T+ L+
Sbjct: 262 DALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLL 318
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G ++ MM + + + L + L++ + ++K AYKLL M
Sbjct: 319 SGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMT-TCGC 377
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
P + I + G +L +LL L +K
Sbjct: 378 PPGYVVYNIFIGSICGQEKLPSP-DLLDLAEK 408
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/332 (23%), Positives = 138/332 (41%), Gaps = 54/332 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ L V + + +EMK G D+ TY + F K ++E A
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 511
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LFE M S+G S + Y +
Sbjct: 512 QWLFEEM-------------------------------------RSVGCSPTVVTYTALI 534
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM------ 434
A K + +A + M +AG P+++TY ++ GLCKAG A V ++
Sbjct: 535 HAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDS 594
Query: 435 ----------EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ + P++ T+ L+ G C A++VD A M+ + + + D L
Sbjct: 595 ADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDAL 654
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+GF +++ A ++ ++M K P T+ +LI+++ RL+ AM +L M K +
Sbjct: 655 IDGFCKAGKIDSAQEVFLQMT-KCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDS 713
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKE 576
P + I + ++ + LK LS+ E
Sbjct: 714 CTPNVVTYTAMIDGLCRIGESEKALKLLSLME 745
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 155/371 (41%), Gaps = 28/371 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L + + + ++ M EG + + + + + A KL
Sbjct: 310 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 369
Query: 325 EFMMDGPYKPSVQDCSLLLRSISS---INNPDL-GLVFRVANKYESLGNSLSKSVYDGIH 380
M P ++ + SI + +PDL L ++ + + L+K
Sbjct: 370 NRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFA 429
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L +G+FD+A +++K M GF PD TYS+VI LC A + E A + EM+ G
Sbjct: 430 RCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVT 489
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C A +++A F +M LI+ +L K+V A +
Sbjct: 490 PDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDI 549
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQN------YPPFPE--- 550
M++ RP T+ L++ L A + +A + +L+ + Y P +
Sbjct: 550 FHRMVD-AGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHT 608
Query: 551 ---------PFVQYISKFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
V + K V+ A E L A LS P+ Y + + F G+ A+
Sbjct: 609 LAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQ 668
Query: 601 DL---LYKCPH 608
++ + KC +
Sbjct: 669 EVFLQMTKCGY 679
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 108/279 (38%), Gaps = 53/279 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TY ++ + + + EEM+ G + TY + + K + + A
Sbjct: 487 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 546
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---------- 370
+F M+D +P+ L+ + N + F V K +S
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGN--ISKAFEVYAKLIGTSDSADSDFYFPCE 604
Query: 371 ----LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L+ +V Y + L K + D A +++ AM ++G EP++I Y +I G CKAG+
Sbjct: 605 DRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKI 664
Query: 425 EDA---------CN--------------------------VLDEMEENGCIPDIKTWTIL 449
+ A C VL +M ++ C P++ T+T +
Sbjct: 665 DSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAM 724
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
I G C E ++AL + M EK + LI+G
Sbjct: 725 IDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/329 (24%), Positives = 154/329 (46%), Gaps = 12/329 (3%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
I LS+N + +L + AL FRW G HS +KH+ +Y+ ++ +L R +++
Sbjct: 82 IHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMRE 141
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++EEM++E + ++T K+ R+F R +DAV++F+ + + + + ++LL ++
Sbjct: 142 ILEEMRQESL-ITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLC 200
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ + K+ N+ + ++ IH + R +EA ++ MK G P
Sbjct: 201 KEKFVEQAREIYLELKHYIAPNAHTFNIL--IH-GWCNIRRVEEAHWTIQEMKGYGCRPC 257
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+YS +I C+ F+ ++LDEM+ C P++ T+T ++ A + + AL
Sbjct: 258 VISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVE 317
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M D + LI R++ A + + K + P +T+ ++I
Sbjct: 318 RMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYY 377
Query: 528 RRLEEAMNLLRLMKK--------QNYPPF 548
+ E A +L+ M+K Q Y P
Sbjct: 378 AQEERAFGILKEMEKSGLCKPDIQTYHPL 406
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 186/438 (42%), Gaps = 61/438 (13%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
+L + +D + A A F W F+ S Y +M+ L ++ + L M+++
Sbjct: 92 LLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREILEEMRQES- 150
Query: 161 YIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIG 220
I T ++ A++ D A+ F D ++ + ++ +++ +V+L + +K
Sbjct: 151 LITLNTIAKVMRRFVGARQWKD--AVRIFDD--LQFLGLEKNTESM-NVLLDTLCKEKFV 205
Query: 221 KKLEDMKIEL-------SDNFVLTVLKELRIYPVKALGFFRW-VGEHSGY--KHNTITYN 270
++ ++ +EL + F + + I V+ W + E GY + I+Y+
Sbjct: 206 EQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEA---HWTIQEMKGYGCRPCVISYS 262
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
I++ + ++ +++++EM+ + ++ TY I K E+A+++ E M
Sbjct: 263 TIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVERMNAV 322
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
+P L F NSL +Y L + GR D
Sbjct: 323 GCRPDT-------------------LFF----------NSL---IY-----TLGRAGRID 345
Query: 391 EAEKMMK-AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG-CIPDIKTWTI 448
+A + K AM A P+ TY+ +I C + E A +L EME++G C PDI+T+
Sbjct: 346 DATHVFKVAMPKASVAPNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHP 405
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADL--LDVLINGFLSQKRVNGAYKLLVEMIE 506
LI+ E+D L M Y DL +LI+G R A+ L EM +
Sbjct: 406 LIKSCFKMREIDTWLNDILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMAD 465
Query: 507 KVRLRPWQATFKTLIEKL 524
+ + P T + L++++
Sbjct: 466 Q-DIVPRYKTCRLLLDEV 482
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 108/221 (48%), Gaps = 10/221 (4%)
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
+FR A + + +S + YD + L ++ D+ ++++ M+ N T ++V+
Sbjct: 106 IFRWAGSHSNFKHS--QQSYDMMVDILGRMKAMDKMREILEEMRQESLITLN-TIAKVMR 162
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
A +++DA + D+++ G + ++ +L+ C V++A + ++ K+Y A
Sbjct: 163 RFVGARQWKDAVRIFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLEL--KHYIA 220
Query: 477 -DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+A ++LI+G+ + +RV A+ + EM + RP ++ T+I+ + + +
Sbjct: 221 PNAHTFNILIHGWCNIRRVEEAHWTIQEM-KGYGCRPCVISYSTIIQCYCQEQNFDRVYD 279
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE 576
LL M+ QN P V Y + + A +F +AL V E
Sbjct: 280 LLDEMQAQNCSP---NVVTYTTIMCALAKAEKFEEALQVVE 317
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 154/356 (43%), Gaps = 8/356 (2%)
Query: 253 FRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 58 FAAILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHL 117
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K + + ++ +++ Y S+ ++L+ + D+ + V + G
Sbjct: 118 MKLKYFKLVWGFYKEILECGYPXSLYFFNILMHRFC--KDGDIRVAXSVFDAITKWGLRP 175
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA +
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELF 235
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G +
Sbjct: 236 DEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKK 295
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A L+ EM K L+P + T+ TLI+ L+ A M ++N
Sbjct: 296 GDLKQANDLIXEMSMK-GLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVA 354
Query: 552 FVQYISKF---GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 355 YTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLL 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNXLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M E
Sbjct: 290 YGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A M+ DA ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 2/192 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY + K ++ A
Sbjct: 242 GLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQA 301
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L M KP + L+ N B R E++ L Y +
Sbjct: 302 NDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENI--RLDDVAYTALI 359
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +
Sbjct: 360 SGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHV 419
Query: 441 PDIKTWTILIQG 452
P + T+ +L+ G
Sbjct: 420 PSVVTYNVLMNG 431
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 155/347 (44%), Gaps = 19/347 (5%)
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
T+V++VL +D + + LE +E + N V VLK L + KAL FF+ + H Y H
Sbjct: 41 TIVNLVLKTD-SQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAH 99
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +++ + + R + W +V+ M+ + T+ I+ ++ + A+K+F
Sbjct: 100 VSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIF 159
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + VQD L S ++I + V + + E N L K V+ G R L
Sbjct: 160 FSMHE---HGCVQD----LNSFNTILD-----VLCKSKRVEMADNKLFK-VFRGRFRILL 206
Query: 385 K----LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G+ EA + MK E D +TY+ V+ G AG A V +EM G +
Sbjct: 207 KGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVL 266
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+ IQ C + V+ A+ F +M+ K Y ++ +V+I G R+ A +
Sbjct: 267 PSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEF 326
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ M + P + +I A +E+ +N+ M + P
Sbjct: 327 MARMKDD-ECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLP 372
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/542 (22%), Positives = 214/542 (39%), Gaps = 103/542 (19%)
Query: 11 LRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSL 70
L LAN L S+R T PL +++ +++++ T+ +N
Sbjct: 2 LILANRLSSLRP--TEPLLKPISYNYNLTTTTSPPSPPQDATIVN--------------- 44
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
L+L D S L LE+ + T V VL+ L N KA FF + + S+
Sbjct: 45 -LVLKTD-SQTLTRTLEKYPVEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHPTYAHVSS 102
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL--NQ 188
+ + K W + RM+ +T+ I A K + +
Sbjct: 103 SFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSM 162
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
G V+++ N T++DV+ S ++E++DN + V +
Sbjct: 163 HEHGCVQDL---NSFNTILDVLCKSK------------RVEMADNKLFKVFR-------- 199
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
G FR +L+ R +++ W +MKK E+D+ TY +
Sbjct: 200 --GRFRI----------------LLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVV 241
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F + A ++F M+ PSV
Sbjct: 242 HGFGVAGEVRKAQRVFNEMIGEGVLPSV-------------------------------- 269
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y+ + L K + A + + M G+ P++ TY+ VI GLC GR E A
Sbjct: 270 -----ATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAM 324
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ M+++ C P+++ + ++I+ C A E+++ L F KM + + + D ++LI+
Sbjct: 325 EFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAM 384
Query: 489 LSQKRVN---GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+K+ + A KLL+EM+E+ L P + TF +++ LL + A +LRL +
Sbjct: 385 FVRKKSDYLLTAGKLLIEMVERGFL-PRKFTFNRVLDGLLLTGNQDFAKEILRLQSRCGR 443
Query: 546 PP 547
P
Sbjct: 444 LP 445
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 94/215 (43%), Gaps = 11/215 (5%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ D A K+ +M G D +++ ++ LCK+ R E A N L ++ +
Sbjct: 150 GKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRG-------RF 202
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
IL++G A ++ A F +M ++ + D +++GF V A ++ EMI
Sbjct: 203 RILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIG 262
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVE 563
+ L P AT+ I+ L +E A+++ M ++ Y P + ++ + G +E
Sbjct: 263 EGVL-PSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRME 321
Query: 564 DASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
A EF+ + E + V +F + E
Sbjct: 322 KAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIE 356
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 70/170 (41%), Gaps = 15/170 (8%)
Query: 421 AGRFED---ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
AGR D ++D M P+ KT+ I+ + + +A + DRA+ F M E D
Sbjct: 111 AGRLRDYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQD 170
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ + +++ KRV EM + + ++ F+ L++ A +L+EA
Sbjct: 171 LNSFNTILDVLCKSKRV--------EMADNKLFKVFRGRFRILLKGFFRAGQLKEAWEFF 222
Query: 538 RLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAY 583
MKK+ + + FG + + F + + PS A Y
Sbjct: 223 LQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATY 272
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + J ++G++ +RD + + + DT K+
Sbjct: 37 ASAVFAAIXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTXEHKFWVPFDTCRKV 96
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ J V +
Sbjct: 97 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRJAQSVFDAITKW 154
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I G CK + +DA
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 214
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ +T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 215 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 274
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 275 LCKKGDLKQAHHLIDEMSXK-GLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRL 333
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 334 DEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 393
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K +DA
Sbjct: 155 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+ P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 215 NELFDEMLVKGLVPNXVXFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 269
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 270 TLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQE 329
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ DA ++IN F + V
Sbjct: 330 NXRLDEVXYTALISGLCXEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKG 389
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 390 SKLLKEM 396
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 264 DLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYTT------------------ 305
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L + Y + L
Sbjct: 306 --LIDGCCKEG-----------------DLDSAFEHXKRMIQENXRLDEVXYTALISGLC 346
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 347 XEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 406
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 407 TYNVLMNG 414
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 148/327 (45%), Gaps = 7/327 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
++G++ VRD K+ + DT K+ +FR + ++ +
Sbjct: 68 VFSGLMIAYLESGFVRDAVQCFRLTKQHKIRVPFDTCRKVLEHLMEFRYFKLVWDFYKEV 127
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ Y S+ ++L++ ++ L V + G S ++ + KLG
Sbjct: 128 LECGYPASLYFFNILMQRFC--KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLG 185
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
DE ++ AM +G +PD TYS +I GLCK G+ ++A + +EM +NG +P+ T+T
Sbjct: 186 DLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFT 245
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI GHC +VD A+ + +M+ + D + LI G + + + L+ EMI
Sbjct: 246 TLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMN 305
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVED 564
L+P + ++ TLI+ LE A+ L M +++ + IS + G D
Sbjct: 306 -GLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGD 364
Query: 565 ASEFLK-ALSVKEYPSSAAYLQVFESF 590
A + L+ LSV P + Y + F
Sbjct: 365 AEKMLREMLSVGLKPDNGTYTMIINEF 391
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 165/390 (42%), Gaps = 52/390 (13%)
Query: 203 AKTLVDVVL---GSD-WDDKIGKKLEDMKIELSDNFVLTVLKELRI---YPVKALGFFRW 255
AK+L+ VV+ G D D LE ++SD +V + L + + A+ FR
Sbjct: 32 AKSLIQVVVSRKGKDSASDVFEAILETKGTQISDFYVFSGLMIAYLESGFVRDAVQCFRL 91
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+H + ++ +VL R F W+ +E+ + GY + + + ++F
Sbjct: 92 TKQHK----IRVPFDTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYFFNILMQRFC 147
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K M A +F+ + +PSV + L+ + + D G FR+ + + G
Sbjct: 148 KEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYIKLGDLDEG--FRLKSAMHASGAQPD 205
Query: 373 KSVYDGIHRALTKLGRFDEAEKMM-----------------------------------K 397
Y + L K G+ DEA ++ K
Sbjct: 206 VYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYK 265
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M + G PD ITY+ +I+GLCK G + +++DEM NG PD ++T LI G C
Sbjct: 266 QMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEG 325
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+++ AL KM++++ D LI+ + R A K+L EM+ V L+P T+
Sbjct: 326 DLEIALELRNKMIQESIRLDDVAYTALISCLCREGRAGDAEKMLREMLS-VGLKPDNGTY 384
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I + R + A LLR M++ P
Sbjct: 385 TMIINEFCKKRDSKTASKLLREMQRDGPVP 414
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 2/186 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ ++E V + ++M +G D+ TY + K ++
Sbjct: 235 NGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQ 294
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
L + M+ KP + L+ S DL + + NK L Y +
Sbjct: 295 VHDLIDEMIMNGLKPDKISYTTLIDG--SCKEGDLEIALELRNKMIQESIRLDDVAYTAL 352
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GR +AEKM++ M + G +PDN TY+ +I CK + A +L EM+ +G
Sbjct: 353 ISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTASKLLREMQRDGP 412
Query: 440 IPDIKT 445
+P + T
Sbjct: 413 VPGVVT 418
>gi|255584314|ref|XP_002532893.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527353|gb|EEF29498.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 625
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 182/391 (46%), Gaps = 29/391 (7%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY---PVKALGFFRWV-G 257
+ + + V+ W++ + K+ + L+ + + VL +L ++ P + F+W+
Sbjct: 13 LVQNICATVIKGGWNNLLRPKICSI---LTASTLHQVLYQLSLHSQGPCLSWALFKWIES 69
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---------------EMDID 302
YKH+ + ++ +L + + ++ +++E++ + + DI+
Sbjct: 70 SIPNYKHSLQSSWTMIHILTKFKHLKTAQSLLEKIAYRDFLSTQSVLSALVRLHDDPDIN 129
Query: 303 TYI--KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+++ + + +M ++A+++FE MM ++P + C++LL S++ D+ V++V
Sbjct: 130 SHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACTVLLNSLAKDRLTDM--VWKV 187
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
K +G + VY+ + A K G ++A+ ++ M++ PD TY+ +I CK
Sbjct: 188 YKKMARIGVEANIHVYNVLIHACCKSGDVEKADNLLSEMESKCVFPDLFTYNTLISLYCK 247
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G +A +V D ME G PDI T+ LI G C + A+ F ++ ++ +
Sbjct: 248 KGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI--RDATPNHVT 305
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
LI+G+ ++ A +L EM E L P T+ +++ KL R+ +A LL M
Sbjct: 306 YTTLIDGYCRLNDLDQALRLREEM-EAQGLYPTVVTYNSILRKLCEIGRIRDANKLLNEM 364
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKA 571
++ P I+ + + D LK
Sbjct: 365 SEKKIEPDNVTCNTLINAYCKIGDMKSALKV 395
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 130/277 (46%), Gaps = 5/277 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++ + + + +V + M++EG + DI TY + F K M +A++LF+ +
Sbjct: 237 TYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGRMREAMRLFKEI 296
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
D P+ + L+ +N DL R+ + E+ G + Y+ I R L ++G
Sbjct: 297 RDAT--PNHVTYTTLIDGYCRLN--DLDQALRLREEMEAQGLYPTVVTYNSILRKLCEIG 352
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R +A K++ M EPDN+T + +I CK G + A V + M E G D T+
Sbjct: 353 RIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIGDMKSALKVKNRMVEAGLKLDQFTYK 412
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G C E+D A M++ + L++G+ +Q+ KL E + K
Sbjct: 413 ALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQNEEAVLKLPDEFVRK 472
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L ++ ++ LI + +++ A + LM+++
Sbjct: 473 -GLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKG 508
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/444 (22%), Positives = 181/444 (40%), Gaps = 40/444 (9%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVC------DKKQ-------------FRPSSTVYS 133
L+ +SV+ L +L +DP+ S F+W+ KQ FRP +
Sbjct: 110 LSTQSVLSALVRLHDDPDINSHVFSWLVIVYANTKMKQEAIQVFEHMMVNGFRPHLHACT 169
Query: 134 LMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK-KASDLAALNQFHDG 192
++L +L W ++M I E + + VL A K+ D+ +
Sbjct: 170 VLLNSLAKDRLTDMVWKVYKKMAR----IGVEANIHVYNVLIHACCKSGDVEKADNLLSE 225
Query: 193 MVKEIAMDNV--AKTLVDVVL--GSDWD-----DKIGKKLEDMKIELSDNFVLTVLKELR 243
M + ++ TL+ + G ++ D++ ++ I ++ + KE R
Sbjct: 226 MESKCVFPDLFTYNTLISLYCKKGMHYEALSVQDRMEREGIKPDIVTYNSLIHGFCKEGR 285
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ F+ + + + N +TY ++ R + + EEM+ +G + T
Sbjct: 286 MR--EAMRLFKEIRDATP---NHVTYTTLIDGYCRLNDLDQALRLREEMEAQGLYPTVVT 340
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y I R+ + + DA KL M + +P C+ L+ + I D+ +V N+
Sbjct: 341 YNSILRKLCEIGRIRDANKLLNEMSEKKIEPDNVTCNTLINAYCKIG--DMKSALKVKNR 398
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G L + Y + K+ D A++++ +M +AGF P TYS ++ G C
Sbjct: 399 MVEAGLKLDQFTYKALIHGFCKIREMDGAKELLLSMLDAGFSPSYCTYSWLVDGYCNQQN 458
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E + DE G D + LI+ C +VD A F+ M EK D+ +
Sbjct: 459 EEAVLKLPDEFVRKGLCVDKSLYRALIRRFCKREQVDYAKKIFSLMQEKGTLGDSVIYTS 518
Query: 484 LINGFLSQKRVNGAYKLLVEMIEK 507
L + + N A LL EM ++
Sbjct: 519 LAYAYWKLGKANAASDLLDEMYKR 542
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 6/315 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T+N ++R L + + ++ ++ EG++ D+ TY + K A
Sbjct: 177 GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAA 236
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M+ +P+V + ++ S+ + + F + ++ + G S Y+ +
Sbjct: 237 IRLLRSMVQKNCRPNVIAYNTIIDSLCK--DRQVTEAFNLFSEMITKGISPDIFTYNSLI 294
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ P+ + +S V+ LCK G A +V+D M + G
Sbjct: 295 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 354
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ GHC +E+D A+ F M+ K + ++LING+ +R++ A L
Sbjct: 355 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 414
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L +M + L T+ TLI L RL+ A+ L M P + + Y+
Sbjct: 415 LEQMSLQ-GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 473
Query: 558 KFGTVEDASEFLKAL 572
K + +A LKA+
Sbjct: 474 KNHHLAEAMVLLKAI 488
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/381 (21%), Positives = 150/381 (39%), Gaps = 79/381 (20%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P Y ++ L + LR M + +C Y +I+ L K ++ ++
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE-- 270
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + K I+ D +L+ + +W V T+L E+
Sbjct: 271 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEW-----------------KHVTTLLNEM 313
Query: 243 ---RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+I P N + ++ ++ L + + +VV+ M K G E
Sbjct: 314 VNSKIMP------------------NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 355
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ TY + M++AVK+F+ M+ P+V+ ++L+
Sbjct: 356 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILI---------------- 399
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
N Y ++ R D+A +++ M G D +TY+ +I GLC
Sbjct: 400 --NGY-------------------CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLC 438
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
GR + A + EM +G IPD+ T+ IL+ C + + A++ + N DAD
Sbjct: 439 HVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADIL 498
Query: 480 LLDVLINGFLSQKRVNGAYKL 500
+ ++ I+G + A L
Sbjct: 499 VYNIAIDGMCRAGELEAARDL 519
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 107/267 (40%), Gaps = 34/267 (12%)
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PD--- 353
F ++DA+ F M+ PS D + LL SI+ + + PD
Sbjct: 90 FNTLDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYT 149
Query: 354 -------------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
LG F V K LG + ++ + R L G+ EA +
Sbjct: 150 LNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTI 209
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
GF+PD +TY ++ GLCK G A +L M + C P++ + +I C +V
Sbjct: 210 GEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVT 269
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A F++M+ K D + LI+ + LL EM+ ++ P F T+
Sbjct: 270 EAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPNVVVFSTV 328
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ L + A +++ +M K+ P
Sbjct: 329 VDALCKEGMIAIAHDVVDMMIKRGVEP 355
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/384 (21%), Positives = 167/384 (43%), Gaps = 42/384 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI-------SRQFQK 313
G N++T N I++ + + ++EEM G+ ++ + I SR
Sbjct: 448 GINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESA 507
Query: 314 FRMME----------------------------DAVKLFEFMMDGPYKPSVQDCSLLLRS 345
R + DAV+L+ +++ + ++ + L+
Sbjct: 508 LRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHG 567
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ N + R+ K G L K Y+ + K G+ +E K+ M G E
Sbjct: 568 LCKTGN--MQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I G+C+ G+ ++A N+ +E + +P++ T+ ++I G+C A++++
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F +++ +N + ++ + + LI + A+KL +M K + P AT+ +LI +
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK-GIPPTTATYSSLIHGMC 744
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKE-YPSSA 581
R+E+A L+ M+K+ P + I K G ++ L+ +S + +P+
Sbjct: 745 NIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKI 804
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK 605
Y + + + G A LL++
Sbjct: 805 TYTVMIDGYSKSGDMKTAAKLLHE 828
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 3/273 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + ITYN ++ + V + + + EM K+G E D TY + + +++A
Sbjct: 588 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEA 647
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L+ P+V +++ + + G ++L L+ VY+ +
Sbjct: 648 VNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNL--ELNSVVYNTLI 705
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RA + G EA K+ M++ G P TYS +I G+C GR EDA ++DEM + G +
Sbjct: 706 RAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLL 765
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ +T LI G+C ++D+ + +M + + V+I+G+ + A KL
Sbjct: 766 PNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKL 825
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
L EM+ K + P T+ L ++EE
Sbjct: 826 LHEMVGK-GIVPDTVTYNVLTNGFCKEGKIEEG 857
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 113/500 (22%), Positives = 207/500 (41%), Gaps = 52/500 (10%)
Query: 79 SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN 138
S + + + LSP +SV + +R+ + +P+ A FF + D FR + Y +++R+
Sbjct: 131 STQCKQLIPHLSPH-QFDSVFFSVRR-NVNPKTALNFFYFASDSCGFRFTLRSYCVLMRS 188
Query: 139 LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK--AKKASDLAALNQFHDGMVKE 196
L+ + + L R+ + + + G K + AS +A LN E
Sbjct: 189 LIVSGFVSPARLLLIRLIDRKLPV-------LFGDPKNRHIEIASAMADLN--------E 233
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ VA VD+++ + T + + A+G FR++
Sbjct: 234 VGESGVAVAAVDLLI---------------------HVYCTQFRNVGFR--NAIGVFRFL 270
Query: 257 GEHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+ G T +L L + +E + +W V E ++G D+ + F K
Sbjct: 271 A-NKGVFPTVKTCTFLLSSLVKANELEKSYW--VFETMRQGVSPDVYLFSTAINAFCKGG 327
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+EDA++LF M P+V + L+ + N D FR K G + +
Sbjct: 328 KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEA--FRFKEKMVKDGVNATLIT 385
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L KL +F+EA ++K GF P+ + Y+ +I G CK G DA + +M
Sbjct: 386 YSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P+ T +IQG C ++++A +M+ + + + +I+ R
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYPPF--PEPF 552
A + L EM+ + +RP TL+ L + +A+ L RL++K
Sbjct: 506 SALRFLREMLLR-NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNAL 564
Query: 553 VQYISKFGTVEDASEFLKAL 572
+ + K G +++A LK +
Sbjct: 565 IHGLCKTGNMQEAVRLLKKM 584
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 131/290 (45%), Gaps = 3/290 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TYN ++ L +H ++ + + E+M K+G + TY + K
Sbjct: 340 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A + + ++ + P+ + L+ + N LG R+ S G + + +
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGN--LGDALRIRGDMVSKGINPNSVTLN 457
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + K+G+ ++AE +++ M + GF + ++ +I LC RFE A L EM
Sbjct: 458 SIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLR 517
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P+ T L+ G C + A+ + +++EK + A+ + LI+G + A
Sbjct: 518 NMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEA 577
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+LL +M+E+ + + T+ TLI ++EE L M KQ P
Sbjct: 578 VRLLKKMLERGFVLD-KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 626
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/399 (20%), Positives = 173/399 (43%), Gaps = 44/399 (11%)
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA-------------------------- 277
+ P AL FF + + G++ +Y ++R L
Sbjct: 157 VNPKTALNFFYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGD 216
Query: 278 ---RHESVRDFWNVVEEMKKEGYEMD-IDTYIKI-SRQFQKFRMMEDAVKLFEFMMDGPY 332
RH + + E+ + G + +D I + QF+ +A+ +F F+ +
Sbjct: 217 PKNRHIEIASAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGF-RNAIGVFRFLANKGV 275
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY--DGIHRALTKLGRFD 390
P+V+ C+ LL S+ N +L + V +E++ +S VY A K G+ +
Sbjct: 276 FPTVKTCTFLLSSLVKAN--ELEKSYWV---FETMRQGVSPDVYLFSTAINAFCKGGKVE 330
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A ++ M+ G P+ +TY+ +I GLCK G ++A ++M ++G + T+++LI
Sbjct: 331 DAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLI 390
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G + + A + +EK + + + + LI+G+ + A ++ +M+ K +
Sbjct: 391 NGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSK-GI 449
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
P T ++I+ ++E+A +L M + + P F + ++ E A
Sbjct: 450 NPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALR 509
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
FL+ + ++ P+ + EG+H +A +L ++
Sbjct: 510 FLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR 548
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 146/349 (41%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N + YN ++ + ++ D + +M +G + T I + F K ME A
Sbjct: 413 GFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQA 472
Query: 321 VKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+ E M+ + P + ++S L + + + + L ++ G
Sbjct: 473 ECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGG 532
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K G+ +A ++ + GF + +T + +I GLCK G ++A +L +M E G
Sbjct: 533 ----LCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D T+ LI G C +V+ +M+++ + D ++LI+G +++ A
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQY 555
L E + L P T+ +I+ A ++EE L + QN ++
Sbjct: 649 NLWNECKSR-DLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRA 707
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G +A + + K P++A Y + N GR +AK L+
Sbjct: 708 YCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 756
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 78/200 (39%), Gaps = 37/200 (18%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N++ YN ++R R+ + + + + ++M+ +G TY + MEDA L
Sbjct: 697 NSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLI 756
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P+V Y +
Sbjct: 757 DEMRKEGLLPNV-------------------------------------VCYTALIGGYC 779
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KLG+ D+ +++ M + P+ ITY+ +I G K+G + A +L EM G +PD
Sbjct: 780 KLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTV 839
Query: 445 TWTILIQGHCAANEVDRALL 464
T+ +L G C +++ L
Sbjct: 840 TYNVLTNGFCKEGKIEEGKL 859
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T ++ R V D ++V++M + GY+ DI Y I K + + DA
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
F+ + +P+V + L+ + + + R ++ L + + K +
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSS--------RWSDAARLLSDMIKKKITPNVI 261
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + A K G+ EA+++ + M +PD +TYS +I GLC R ++A + D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC+ D+ ++ LI G C A V+ + F +M ++ ++ + LI GF V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A + +M + + P T+ L+ L LE+A+ + M+K+ +
Sbjct: 382 DKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 555 YI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I K G VE+A +LS+K P Y + +G +E + L K
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ LF M+ PS+ D + LL +I + D +V + K E LG +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRNDLYTF 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + A ++ M G+EPD +T ++ G C+ R DA +++D+M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PDI + +I C V+ A F ++ K + L+NG + R +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +LL +MI+K ++ P T+ L++ + ++ EA L M + + P
Sbjct: 244 AARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ KL ++D + K M+ G D T++ VI C + A ++L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD T L+ G C N V A+ KM+E Y D + +I+ KRVN
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A+ E IE+ +RP T+ L+ L + R +A LL M K+ P +
Sbjct: 208 DAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 556 ISKF---GTVEDASEFLKAL 572
+ F G V +A E + +
Sbjct: 267 LDAFVKNGKVLEAKELFEEM 286
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ITY+ +L ++ V + + EEM + + DI TY + +++A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ V + L+ + G+ +FR ++ + N+++ Y+ + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT---YNTLIQGF 375
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D+A++ M G PD TY+ ++ GLC G E A + ++M++ DI
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T +I+G C +V+ A F + K D +++G ++ ++ L +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 504 M 504
M
Sbjct: 496 M 496
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K +++ ++ +ME G D+ T+ I+I C +V AL
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM++ Y+ D + L+NGF + RV+ A L+ +M+E + +P + +I+ L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLC 201
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEY-PSSA 581
+R+ +A + + ++++ P + ++ DA+ L + K+ P+
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + ++F G+ EAK+L
Sbjct: 262 TYSALLDAFVKNGKVLEAKEL 282
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ ++ L H+ + + + + M +G D+ +Y + F K + +ED +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + + L++ + D F ++ + G S Y+ + L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF--FSQMDFFGISPDIWTYNILLGGLC 411
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + M+ + D +TY+ VI G+CK G+ E+A ++ + G PDI
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNY--------DADADLLDVLINGFLS 490
T+T ++ G C + + KM ++ D D L LI LS
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS 525
>gi|359495078|ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Vitis vinifera]
Length = 1294
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 41/315 (13%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
V VLK ++ PV FF W G+ GYKHN +YN L R R V E M
Sbjct: 660 LVAEVLK-VQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMN 718
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+G PS + +L+R N
Sbjct: 719 MQGKP-----------------------------------PSEKQFEILIRMHIDANR-- 741
Query: 354 LGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
GL V+ V K + G +Y+ I L K G D A + + K G +++TY
Sbjct: 742 -GLRVYYVYEKMKKFGIKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYM 800
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ GLCKAGR ++ V +EM ++ PD+ +T L+ C N V F +M +K
Sbjct: 801 ILVKGLCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQK 860
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
Y D + LI GF+ +RV A LL ++++ R A + +LIE + +++++
Sbjct: 861 KYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMDS-GYRADLAIYNSLIEGMCNVKQVDK 919
Query: 533 AMNLLRLMKKQNYPP 547
A L ++ ++ P
Sbjct: 920 AYKLFQVTVHESLEP 934
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 126/559 (22%), Positives = 217/559 (38%), Gaps = 133/559 (23%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKK-------------------- 123
NKL ++P L E + K+ DP S FF+W +K
Sbjct: 651 NKLRRVTPVLVAEVL-----KVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSN 705
Query: 124 QFRPSSTVYSLMLRNLVNKD-SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK--- 179
QFR + V LM N+ K S KQF + +R +I+ L + V +K KK
Sbjct: 706 QFRAADQVPELM--NMQGKPPSEKQFEILIRM------HIDANRGLRVYYVYEKMKKFGI 757
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNF----- 234
+ N+ DG+VK +D D ED +E S +
Sbjct: 758 KPRVFLYNRIMDGLVKTGHLDLAMSVYEDFK-------------EDGLVEESVTYMILVK 804
Query: 235 ----------VLTVLKELR---IYP--------VKALGFFRWVGE---------HSGYKH 264
VL V +E+R + P V AL VGE Y
Sbjct: 805 GLCKAGRIDEVLEVWEEMRKDKVEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKYLI 864
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ Y ++ +E V ++++++ GY D+ Y + + ++ A KLF
Sbjct: 865 DRAIYGSLIEGFVVNERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLF 924
Query: 325 EFMMDGPYKPS----------------VQDCSLLLRSISSINNP---DLGLVFRVA-NKY 364
+ + +P+ + D LL + + P DL F V K
Sbjct: 925 QVTVHESLEPNFLTVKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKG 984
Query: 365 ESLGNSL------------SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
E L +L S S+Y+ + A+ + G +A + +K++ F+PD+ TYS
Sbjct: 985 ERLKLALEVFEHLKAKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYS 1044
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL----CFAK 468
I + G ++AC +++ E +P + + L++G C + E+D A++ C A
Sbjct: 1045 NAIICFVEVGDVQEACACYNKIIEMCQLPSVAAYRSLVKGLCKSEEIDAAIMLVRDCLAN 1104
Query: 469 M----MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ ME Y +L +G ++K ++ +L EM+++ P + T+ LI +
Sbjct: 1105 VTSGPMEFKY--TLTILHACKSGN-AEKVID----VLNEMMQE-GCTPDEVTYSALISGM 1156
Query: 525 LGARRLEEAMNLLRLMKKQ 543
LEEA + M+++
Sbjct: 1157 CKHGTLEEARKVFSNMRER 1175
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT LR Y + + +F E G H+ ++ ++ R + +V+ +M K
Sbjct: 77 LLTATANLRRY--ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK 134
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
GYE I T+ + F + DA L M+ Y+P+V + L+ + N +L
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCK--NGEL 192
Query: 355 GLVFRVANKYESLG--------NSL-------------SKSVYDGIHRAL---------- 383
+ + N+ E G N+L ++ + D + R++
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 384 ----TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G DEA+++ K M + +P+N+TY+ +I GLC GR DA D M GC
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ LI G C VD + F +M + ++AD + LI+G+ ++ A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK-QNYPPFP--EPFVQYI 556
+ M+ + R+ P T L+ L +E A+ M++ + Y + +
Sbjct: 373 IFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K VE A E L V+ P + Y + G EA +L+ +
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 131/282 (46%), Gaps = 7/282 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DA LF M+ PS+ D + +L I+ +N D+ V + +K E+LG S +
Sbjct: 586 DDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDI--VIYLYHKMENLGISHDLYSFT 643
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + R A ++ M GF P +T ++ G C+ RF++A +++D M+
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P++ + +I G C +++ AL F M +K ADA + LI+G + R A
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL +M+++ ++ P F LI+ + L EA NL + M +++ P + I+
Sbjct: 764 ARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822
Query: 558 KF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGR 595
F G + DA + K +P Y + F R
Sbjct: 823 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKR 864
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 138/346 (39%), Gaps = 42/346 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N + YN ++ L ++ + + V M+K+G D TY + DA
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L M+ P+V +F + +
Sbjct: 764 ARLLRDMVKRKIDPNV--------------------IF-----------------FTALI 786
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G EA + K M P+ TY+ +I G C G DA + D M GC
Sbjct: 787 DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ LI G C + V+ + F +M + DA + LI+G+ ++N A K+
Sbjct: 847 PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
M++ + P T+ L++ L ++E+A+ ++ ++K + +Q +
Sbjct: 907 FNRMVD-CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ +++A ++L+ K P + AY+ + +G EA L
Sbjct: 966 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA LF M+ PS+ D + LL + +++ + + F + K E G S +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYF--SQKMELYGISHDLYSFT 110
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + R A ++ M G+EP +T+ ++ G C R DA +++ M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ + LI G C E++ AL +M +K AD + L+ G R + A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++L +M+++ + P TF LI+ + L+EA L + M + + P + I+
Sbjct: 231 ARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 558 KF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
G + DA + ++ K +P+ Y + F
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 109/243 (44%), Gaps = 4/243 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N I + ++ + ++ + N+ +EM + ++ TY + F + DA +F
Sbjct: 778 NVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMF 837
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVYDGIHRAL 383
+ M+ P V + L+ + G+ Y+ L G++ + Y+ +
Sbjct: 838 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT---YNTLIHGY 894
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G+ + A+K+ M + G PD +TY+ ++ LC G+ E A ++++++++ DI
Sbjct: 895 CQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDI 954
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+IQG C +++ A F + K DA +I+G + A KL
Sbjct: 955 ITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRR 1014
Query: 504 MIE 506
M E
Sbjct: 1015 MKE 1017
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 147/389 (37%), Gaps = 75/389 (19%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + P+ VY+ ++ L L L M++ + TY ++L L + + S
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 182 DLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
D A + D M + I D V T L+DV + D+ + ++M
Sbjct: 229 DAARM--LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI------------- 273
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
S N +TYN I+ L H + D + M +G +
Sbjct: 274 ------------------QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ TY + F KFRM+++ +KLF+ M + N D+
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF------------------NADI------ 351
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
Y+ + ++G+ A + M + PD IT+ ++ GLC
Sbjct: 352 -------------FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G E A D+M E+ I + I+I G C A++V++A F ++ + DA
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
++I G NG + E+I +++
Sbjct: 459 YTIMILGLCK----NGPRREADELIRRMK 483
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
RF++A + M ++ P + +++++ R+E +ME G D+ ++T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
ILI C + + AL KMM+ Y+ L++GF R+ A+ L++ M+ K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-K 169
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P + TLI+ L L A+ LL M+K+ + ++ G D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
A+ L+ + + P + + + F +G EA++L
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 97/219 (44%), Gaps = 5/219 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+FD+A + M + P + +++V+ + K +F+ + +ME G D+ ++T
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
ILI C + + AL KMM+ + L L+NGF R A LV+ ++
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVS-LVDSMDG 702
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P + T+I L R L A+ + M+K+ + IS G D
Sbjct: 703 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
A+ L+ + ++ P+ + + ++F EG EA++L
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNL 801
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 84/189 (44%), Gaps = 2/189 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ + + V D + EM +G D TY + + + + A K+F
Sbjct: 848 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 907
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+D P + ++LL + NN + + + + Y+ I + L
Sbjct: 908 NRMVDCGVSPDIVTYNILLDCLC--NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLC 965
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ + EA + +++ G +PD I Y +I GLC+ G +A + M+E+G +P +
Sbjct: 966 RTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSER 1025
Query: 445 TWTILIQGH 453
+ ++ H
Sbjct: 1026 IYDETLRDH 1034
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L+ + ++ L V +
Sbjct: 108 IEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFC--KEGEIRLAQSVFDSITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + K+G DE ++ M+ +G +PD T+S +I GLCK + +DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 286 LCKKGDLKQXXDLIDEMSMK-GLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G + LL
Sbjct: 345 DDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLL 404
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ + + + + + M+ G + D+ T+ + K M+DA
Sbjct: 166 GLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+B P+ + L+ DL + ++R + L SL + Y+
Sbjct: 226 NELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYR-----QMLSQSLLPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G + ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 68/179 (37%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG K DL F + L Y + L +
Sbjct: 317 LIDGNCKEG-----------------DLETAFEYRKRMIKENIRLDDXAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+ G P+ T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRXGYXPNXVT 418
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 51 ASAVFAAILETKGTQRSDIYVFSGLITAYLETGFLRDAIECYRLTREHKLWVPFDTCRKV 110
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 111 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 168
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G PD TYS +I GLCK + +DA
Sbjct: 169 GLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDA 228
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G IP+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 229 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYG 288
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 289 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 347
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 348 DDVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 407
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 278 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT------------------ 319
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 320 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYAALISGLC 360
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ NG P +
Sbjct: 361 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVV 420
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 421 TYNVLMNG 428
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 106/260 (40%), Gaps = 33/260 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G D+ TY + K M+DA
Sbjct: 169 GLRPSVVSYNTLMNGYIRLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDA 228
Query: 321 VKLFEFMM---------------DGPYKPSVQDCSLLL--RSISSINNPDL----GLVFR 359
+LF+ M+ DG K D ++ + R +S PDL L++
Sbjct: 229 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYG 288
Query: 360 VANKYE-----SLGNSLS-------KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ K + L + +S K Y + K G D A + K M D
Sbjct: 289 LCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLD 348
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++ Y+ +I GLC+ GR DA +L EM G PD T+T++I C +V +
Sbjct: 349 DVAYAALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLK 408
Query: 468 KMMEKNYDADADLLDVLING 487
+M + +VL+NG
Sbjct: 409 EMQRNGHAPSVVTYNVLMNG 428
>gi|302791145|ref|XP_002977339.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
gi|300154709|gb|EFJ21343.1| hypothetical protein SELMODRAFT_32460 [Selaginella moellendorffii]
Length = 336
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 11/291 (3%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A+++F M D P++ + L+ + N D L+ + + G + Y
Sbjct: 49 LTGAIRVFHEMPDKNL-PNMVTYNSLIHGLCMTNGVDSTLLL--MEEMTATGCLPDINTY 105
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K GR EA ++ MK PD ITYS +I G CK R AC + D+M +
Sbjct: 106 NTLIDGLCKTGRVPEANRLFGEMKAKFCNPDVITYSCLIGGFCKLDRINMACTLFDDMLK 165
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+PD+ T+ L++G+C A VD A +M+ + D L++ F KR+
Sbjct: 166 QAALPDVVTFPTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVE 225
Query: 497 AYKLLVEMIEKVRLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A+++L M + + +A ++ +++ L R+ A+ LL +K+ PP + +V
Sbjct: 226 AHRVLKRMAKGGSNKNCKADMFAYRMMMDGLCRTGRMSAALELLEAIKQSGTPPRHDIYV 285
Query: 554 QYISKFGT---VEDASEFLK--ALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
I + A E L+ LS K P++ AY V + EGRH +A
Sbjct: 286 ALIRGLCQGKELRKAMEVLEEMTLSRKGRPNAKAYKAVIQELAREGRHEKA 336
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 82/238 (34%), Gaps = 45/238 (18%)
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI------------------ 448
D + ++ + G + G ++ +LD+M ++ TW
Sbjct: 1 DAVCWNAIATGFSQCGLLDETTKILDKMPA----WNLATWNTLLTSHSLQGNLTGAIRVF 56
Query: 449 ----------------LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
LI G C N VD LL +M D + + LI+G
Sbjct: 57 HEMPDKNLPNMVTYNSLIHGLCMTNGVDSTLLLMEEMTATGCLPDINTYNTLIDGLCKTG 116
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----F 548
RV A +L EM K P T+ LI R+ A L M KQ P F
Sbjct: 117 RVPEANRLFGEMKAKF-CNPDVITYSCLIGGFCKLDRINMACTLFDDMLKQAALPDVVTF 175
Query: 549 PEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
P V+ G V+DA L+ + + P Y + + F R EA +L +
Sbjct: 176 PT-LVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDDFCKVKRMVEAHRVLKR 232
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 103/468 (22%), Positives = 189/468 (40%), Gaps = 55/468 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP+ T Y+ ML + +++ + +M+E CY E T+ ++ L K +
Sbjct: 233 IRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGEL---- 288
Query: 185 ALNQFHDGMVKEIAMDNV---AKTLVDVVLG-----------SDWDDKIGK--------- 221
Q G+++E+A + T ++ G + W++ + +
Sbjct: 289 ---QQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH 345
Query: 222 -----------KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW--VGE---------H 259
K+ D + +LSD ++ ++ Y GF R +GE
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
N +TYN ++ L R + + E+M G D+ TY + K M
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + F+ M+ P + R + + D F++ + + G Y+
Sbjct: 466 AKEFFDEMLHVGLAPD--QFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVF 523
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L KLG +EA ++++ M G PD++TY+ + + G + + +M G
Sbjct: 524 VNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQ 583
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P + T+T+LI H +D A+ F +M EK + +VLINGF ++++ A K
Sbjct: 584 TPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACK 643
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+EM EK + P + T+ LI + + +EA+ L M + P
Sbjct: 644 FFIEMQEK-GIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRP 690
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 143/312 (45%), Gaps = 12/312 (3%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
++ VL +R P AL FF+ V G+K + + IL++L + ++ + V+E +
Sbjct: 107 LLIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERII 166
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+D I +Q + +FE MM + P V++C+ +L+ + N
Sbjct: 167 SFEMYGIVDVLIGGYLNYQ-------CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLV 219
Query: 354 LGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
L V+R+ +Y G + + Y+ + + K G A ++ M+ G P +T++
Sbjct: 220 KALEVYRMMGEY---GIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFN 276
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I GL K G + A ++ EM + G T+ LI G+C + AL + +M+ +
Sbjct: 277 VLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTR 336
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ ++ GF + +++ A + L +M++K L P ++ TLI + E
Sbjct: 337 GVSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKK-NLMPDIISYNTLIYGFCRLGNIGE 395
Query: 533 AMNLLRLMKKQN 544
A LL ++ +N
Sbjct: 396 AFILLDELRFRN 407
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 133/608 (21%), Positives = 240/608 (39%), Gaps = 77/608 (12%)
Query: 25 TRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDW------ 78
R LF FH S + ++ HT+ +T Q I + + I W
Sbjct: 35 VRFLFPSSVSLFHNYSPSIASSKHTTVE--STIQSIAVAPYKDLIFNTIQEKPWAFCNQN 92
Query: 79 --SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
SD+ + + + P+L ++ VL + P A FF V + F+ S + +L
Sbjct: 93 WVSDKFNSVITD--PQL----LIRVLYSIREKPTIALRFFKCVLTQPGFKTSEYAFCAIL 146
Query: 137 RNLVNKDSLKQ-FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK 195
+ LV+ +K +WV R I E Y I+ VL + + +V
Sbjct: 147 QILVDNCLMKSAYWVMER-------IISFEMY-GIVDVL--------IGGYLNYQCLLVF 190
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV-------- 247
E M N + L DV ++I K L D + + V ++ E I P
Sbjct: 191 EKMMRN--RFLPDV----KNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTML 244
Query: 248 ----------KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+AL + E Y + +T+N ++ L++ ++ +++EM K G
Sbjct: 245 HSFCKGGEVQRALDLVPKMQERGCYP-SEVTFNVLINGLSKKGELQQAKGLIQEMAKAGL 303
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ TY + + K ++ +A+ L+E M+ P+V + ++
Sbjct: 304 RVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEG------- 356
Query: 358 FRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
++++ + L + L K++ Y+ + +LG EA ++ ++ + +TY
Sbjct: 357 -KMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTY 415
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I GLC+ G E A + ++M G PD+ T+T+L+ G C + A F +M+
Sbjct: 416 NTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLH 475
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
D I G L A+KL EM+ K P T+ + L LE
Sbjct: 476 VGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTK-GFPPDVITYNVFVNGLCKLGNLE 534
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYLQVF 587
EA LL+ M + + P + ++ G + + E F LS + P+ Y +
Sbjct: 535 EAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLI 594
Query: 588 ESFFNEGR 595
+ GR
Sbjct: 595 HAHALNGR 602
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 97/222 (43%), Gaps = 6/222 (2%)
Query: 259 HSGYKHNTITYNG-ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
H G + Y I+ L ++ + F + EEM +G+ D+ TY K +
Sbjct: 475 HVGLAPDQFAYTARIVGELKLGDTAKAF-KLQEEMLTKGFPPDVITYNVFVNGLCKLGNL 533
Query: 318 EDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
E+A +L + M+ DG V S + + + N L + S G + + Y
Sbjct: 534 EEAGELLQKMIRDGHVPDHVTYTSFMH---AHMENGHLREGREIFYDMLSRGQTPTVVTY 590
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ A GR D A M+ G P+ ITY+ +I G CK + + AC EM+E
Sbjct: 591 TVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQE 650
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
G P+ T+TILI +C + AL +A+M+ K D+
Sbjct: 651 KGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDS 692
>gi|296081308|emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 152/341 (44%), Gaps = 19/341 (5%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
+W + L ++ ++ V VLK ++ PV FF W G+ GYKHN +YN
Sbjct: 102 NWGPPVVADLNKLR-RVTPVLVAEVLK-VQTDPVICSKFFHWAGKQKGYKHNFASYNAFA 159
Query: 274 RVLARHESVRDFWNVVEEMKKEG-------YEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
L R R V E M +G +E+ I +I +R + + + E K+ +F
Sbjct: 160 YCLNRSNQFRAADQVPELMNMQGKPPSEKQFEILIRMHIDANRGLRVYYVYE---KMKKF 216
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+ KP V + ++ + + DL + V ++ G Y + + L K
Sbjct: 217 GI----KPRVFLYNRIMDGLVKTGHLDLAM--SVYEDFKEDGLVEESVTYMILVKGLCKA 270
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
GR DE +++ M+ +PD Y+ ++ L G + V +EM ++ PD+ +
Sbjct: 271 GRIDEVLELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVEPDVMAY 330
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T L+ C N V F +M +K Y D + LI GF+ +RV A LL ++++
Sbjct: 331 TTLVAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLMD 390
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
R A + +LIE + +++++A L ++ ++ P
Sbjct: 391 S-GYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEP 430
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 191/470 (40%), Gaps = 67/470 (14%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-L 183
+P +Y+ ++ LV L KED E TY+ ++ L KA + + L
Sbjct: 218 IKPRVFLYNRIMDGLVKTGHLDLAMSVYEDFKEDGLVEESVTYMILVKGLCKAGRIDEVL 277
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGS-DWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
L++ + K A V V G+ D ++ +++ K+E D T L
Sbjct: 278 ELLDRMRGNLCKPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDKVE-PDVMAYTTL--- 333
Query: 243 RIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
V AL VGE Y + Y ++ +E V ++++++
Sbjct: 334 ----VAALCNGNRVGEGFELFKEMKQKKYLIDRAIYGSLIEGFVVNERVGSACDLLKDLM 389
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS----------------VQ 337
GY D+ Y + + ++ A KLF+ + +P+ +
Sbjct: 390 DSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLTVKPMLVSYAEMKRMD 449
Query: 338 DCSLLLRSISSINNP---DLGLVFRVA-NKYESLGNSL------------SKSVYDGIHR 381
D LL + + P DL F V K E L +L S S+Y+ +
Sbjct: 450 DFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLKAKGYCSISIYNILME 509
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ + G +A + +K++ F+PD+ TYS I + G ++AC +++ E +P
Sbjct: 510 AIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQEACACYNKIIEMCQLP 569
Query: 442 DIKTWTILIQGHCAANEVDRALL----CFAKM----MEKNYDADADLLDVLINGFLSQKR 493
+ + L++G C + E+D A++ C A + ME Y +L +G ++K
Sbjct: 570 SVAAYRSLVKGLCKSEEIDAAIMLVRDCLANVTSGPMEFKY--TLTILHACKSGN-AEKV 626
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
++ +L EM+++ P + T+ LI + LEEA + M+++
Sbjct: 627 ID----VLNEMMQE-GCTPDEVTYSALISGMCKHGTLEEARKVFSNMRER 671
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 114/522 (21%), Positives = 204/522 (39%), Gaps = 105/522 (20%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKK-------------------- 123
NKL ++P L E + K+ DP S FF+W +K
Sbjct: 112 NKLRRVTPVLVAEVL-----KVQTDPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSN 166
Query: 124 QFRPSSTVYSLMLRNLVNK-DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK--- 179
QFR + V LM N+ K S KQF + +R +I+ L + V +K KK
Sbjct: 167 QFRAADQVPELM--NMQGKPPSEKQFEILIRM------HIDANRGLRVYYVYEKMKKFGI 218
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV- 238
+ N+ DG+VK +D D ED +E S +++ V
Sbjct: 219 KPRVFLYNRIMDGLVKTGHLDLAMSVYEDFK-------------EDGLVEESVTYMILVK 265
Query: 239 --LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
K RI V L R G K + Y +++VL ++ V EEM+K+
Sbjct: 266 GLCKAGRIDEVLEL-LDRMRGNLC--KPDVFAYTAMVKVLVAEGNLDGCLRVWEEMRKDK 322
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS------IN 350
E D+ Y + + + +LF+ M Y L+ R+I +
Sbjct: 323 VEPDVMAYTTLVAALCNGNRVGEGFELFKEMKQKKY--------LIDRAIYGSLIEGFVV 374
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
N +G + G ++Y+ + + + + D+A K+ + + EP+ +T
Sbjct: 375 NERVGSACDLLKDLMDSGYRADLAIYNSLIEGMCNVKQVDKAYKLFQVTVHESLEPNFLT 434
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENG--CIPDI-KTWTILIQ---------------- 451
++ + R +D C++L +M++ G I D+ K ++++I+
Sbjct: 435 VKPMLVSYAEMKRMDDFCSLLGQMQKLGFPVIDDLSKFFSVMIEKGERLKLALEVFEHLK 494
Query: 452 --GHCA-------------ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G+C+ EV +AL F + + N+ D+ I F+ V
Sbjct: 495 AKGYCSISIYNILMEAIHRTGEVKKALSLFDDIKDSNFKPDSSTYSNAIICFVEVGDVQE 554
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
A ++IE +L P A +++L++ L + ++ A+ L+R
Sbjct: 555 ACACYNKIIEMCQL-PSVAAYRSLVKGLCKSEEIDAAIMLVR 595
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 133/286 (46%), Gaps = 3/286 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ V + + EEM K G + DI TY + R ++DA
Sbjct: 495 GLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDA 554
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+KL++ ++ +++ N + V + N+ S L+ VY+ I
Sbjct: 555 IKLWDEFKASGLISNIHTYGIMMEGYCKANRIED--VENLFNELLSKKMELNSIVYNIII 612
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+A + G A ++++ MK+ G P+ TYS +I G+C G EDA +++DEM + G +
Sbjct: 613 KAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFV 672
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ +T LI G+C ++D A + +M+ N + V+I+G+ + A L
Sbjct: 673 PNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNL 732
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
L++M E + P T+ L A ++ A + M + P
Sbjct: 733 LIKMKES-GIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLP 777
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 124/251 (49%), Gaps = 5/251 (1%)
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ + G + + Y+ + G+ + ++ + M G +PD TY+ ++ GL
Sbjct: 486 RIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGL 545
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
C G+ +DA + DE + +G I +I T+ I+++G+C AN ++ F +++ K + ++
Sbjct: 546 CNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNS 605
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ +++I V A +LL M K L P AT+ +LI + +E+A +L+
Sbjct: 606 IVYNIIIKAHCQNGNVAAALQLLENMKSKGIL-PNCATYSSLIHGVCNIGLVEDAKHLID 664
Query: 539 LMKKQNYPPFPEPFVQYIS---KFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEG 594
M+K+ + P + I K G ++ A S +L+ +S +P+ Y + + + G
Sbjct: 665 EMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLG 724
Query: 595 RHYEAKDLLYK 605
+A +LL K
Sbjct: 725 NMEKANNLLIK 735
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 154/347 (44%), Gaps = 17/347 (4%)
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+ +++ I Y S QF+ AV +F + PS++ C+ L S+ N +
Sbjct: 149 QAFDLLIHVY---STQFRNLGF-SCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEK 204
Query: 355 GL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
VFRV ++ G + + AL K G+ + A ++ M+ G P+ +TY+
Sbjct: 205 CCEVFRVMSE----GACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNC 260
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GLC+ GR ++A + ++M G P++KT+ LI G N D+ +M+
Sbjct: 261 IINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAG 320
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
++ + + + LI+G+ + GA K+ MI K + P T +L++ + ++E A
Sbjct: 321 FNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISK-NITPTSVTLYSLMQGFCKSDQIEHA 379
Query: 534 MNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
N L + P+ V ++ K A F K + + + PS +
Sbjct: 380 ENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCG 439
Query: 590 FFNEGRHYEAKDLLYKCPHHIRQDSKIS---LLFGSAKSNKVTIPSR 633
+G+H EA +L ++ SK++ L+ G + K+ SR
Sbjct: 440 LCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 486
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 103/232 (44%), Gaps = 8/232 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG N TY ++ + + D N+ E+ + E++ Y I + + +
Sbjct: 564 SGLISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAA 623
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A++L E M P+ S L+ + +I GLV + + + G + Y
Sbjct: 624 ALQLLENMKSKGILPNCATYSSLIHGVCNI-----GLVEDAKHLIDEMRKEGFVPNVVCY 678
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ KLG+ D AE M + P+ TY+ +I G CK G E A N+L +M+E
Sbjct: 679 TALIGGYCKLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKE 738
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+G +PD+ T+ +L G C AN++D A +M + D L++G+
Sbjct: 739 SGIVPDVVTYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHGW 790
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 132/312 (42%), Gaps = 34/312 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TYN I+ L ++ + + + + E+M +G + ++ TY + K
Sbjct: 247 EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 306
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL--------------------- 356
+ + + M+ + P+V + L+ + N + L
Sbjct: 307 DKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSL 366
Query: 357 --VFRVANKYESLGNSLSKSVYDG--IH--------RALTKLGRFDEAEKMMKAMKNAGF 404
F +++ E N+L + + G IH L K R+ A + K M + F
Sbjct: 367 MQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNF 426
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P ++ + ++ GLCK G+ +A + + E G T LI G C A ++ A
Sbjct: 427 RPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASR 486
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M+E+ D + LI GF ++ +V G ++L EM ++ ++P T+ L+ L
Sbjct: 487 IVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR-GIQPDIYTYNFLLRGL 545
Query: 525 LGARRLEEAMNL 536
+L++A+ L
Sbjct: 546 CNVGKLDDAIKL 557
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 115/287 (40%), Gaps = 38/287 (13%)
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
EG D+ ++ + K ME+A++LF M P+V + ++ + N L
Sbjct: 214 EGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQ--NGRL 271
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
F + K G + Y + L KL FD+ ++ M AGF P+ + ++ +
Sbjct: 272 DNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNL 331
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA------------ 462
I G CK G E A + D M P T L+QG C +++++ A
Sbjct: 332 IDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGL 391
Query: 463 ------------LLC----------FAKMM-EKNYDADADLLDVLINGFLSQKRVNGAYK 499
LC F KMM +N+ LL +L+ G + A +
Sbjct: 392 SIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATE 451
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
L ++EK + T LI L GA +L EA +++ M ++ P
Sbjct: 452 LWFRLLEKGS-PASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLP 497
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 155/343 (45%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TY ++ + + + + ++ EM ++G + TY + R + + +E A+++
Sbjct: 353 NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL 412
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M +P+ + + L+ S + + L SL Y+ +
Sbjct: 413 GLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLV--TYNSLIHVQC 470
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G FD A K++ +K G PD TYS I LCK+ R E+AC++ + ++E G +
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+T LI GHC A ++D A+ +M ++ ++ + LI G + +V +VE
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLS-MVEN 589
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
+ K+ ++P AT+ LIE++L + A + M + P + +I + G
Sbjct: 590 MSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGN 649
Query: 562 VEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
V++A + + + P S Y + ++ G Y+A ++L
Sbjct: 650 VKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 165/399 (41%), Gaps = 29/399 (7%)
Query: 226 MKIELSDNFVLTVLKELRIYPVKA----------LGFFRWVGEHSG---YKHNTITYNGI 272
+KI + +N + V +++RI +KA L F R + +K + +YN +
Sbjct: 127 LKILIPNN-LFGVGEKIRISMIKACVSVDDIRFLLDFLRQMNRDDNDIKFKLSVRSYNEL 185
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF-RMMEDAVKLFEFMMDGP 331
L +LAR + + V EM + +I T + + K ++E + + + G
Sbjct: 186 LMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGL 245
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
S SL+L N D+ ++V N + G ++ Y I L + GR DE
Sbjct: 246 SPDSFTYTSLIL---GYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDE 302
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
+ K M+ P TY+ +I L R + ++ +EM E C P++ T+T+++
Sbjct: 303 GISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVD 362
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C ++D + +MMEK + LI G+ + R+ A ++L ++E R
Sbjct: 363 AMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEIL-GLMESNNCR 421
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS------KFGTVEDA 565
P + T+ LI + + +AM LL M + P V Y S K G + A
Sbjct: 422 PNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP---SLVTYNSLIHVQCKAGHFDSA 478
Query: 566 SEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L L P Y ++ R EA DL
Sbjct: 479 YKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/447 (22%), Positives = 177/447 (39%), Gaps = 57/447 (12%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ND A FN + K R + Y+ ++ L + + ++M+ED CY
Sbjct: 262 NNDVNSAYKVFNMM-PNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVR 320
Query: 166 TYLSILGVLKKAKKASDLAALNQFH------------------DGMVKEIAMDN------ 201
TY I+ L + +L ++ F+ D M KE +D
Sbjct: 321 TYTVIIHALFGNDR--NLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILN 378
Query: 202 --VAKTLVDVVL-------GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
+ K LV V+ G + +I LE + + S+N R Y GF
Sbjct: 379 EMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNN----CRPNERTYNELICGF 434
Query: 253 FRWVGEH-----------SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ H S + +TYN ++ V + + +++ +K+ G D
Sbjct: 435 SKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQ 494
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFR 359
TY K + ME+A LF + + K + + L+ D + L+ R
Sbjct: 495 WTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLER 554
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ ++ + L NS S Y+ + + K G+ E M++ M G +P TY+ +I +
Sbjct: 555 MHSE-DCLPNS---STYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEML 610
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ G F+ A V ++M G PD+ T+T I +C + V A A+M+E D+
Sbjct: 611 REGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSL 670
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIE 506
+LI+ + A+ +L M++
Sbjct: 671 TYTLLISAYERLGLAYDAFNVLKRMLD 697
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/338 (23%), Positives = 134/338 (39%), Gaps = 17/338 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K PS Y+ ++R + ++ L M+ ++C E TY ++ K K
Sbjct: 382 EKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVH 441
Query: 182 DLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE--LSDN---- 233
L + + N +L+ V + D K L+ +K + D
Sbjct: 442 KAMTLLSKMLESKLTPSLVTYN---SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498
Query: 234 -FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
F+ T+ K R+ +A F + E G K N + Y ++ + + + +++E M
Sbjct: 499 VFIDTLCKSKRME--EACDLFNSLKE-KGIKANEVMYTALIDGHCKAGKIDEAISLLERM 555
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
E + TY + K +++ + + E M KP+V ++L+ + +
Sbjct: 556 HSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEM--LREG 613
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D RV N+ S G+ Y G EAE MM M AG PD++TY+
Sbjct: 614 DFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYT 673
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+I + G DA NVL M + GC P W LI
Sbjct: 674 LLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNLI 711
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 11/333 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ + T+N ++ R V ++ ++M G+ D+ +Y + + +++
Sbjct: 182 SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE 241
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV+LF M +P + + L++ + + + GL+ + + + LG S Y +
Sbjct: 242 AVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLL--MLRRMKELGWRPSTRAYAAV 295
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + EAE+M++ M G P +T + VI CK GR DA VL+ M+ GC
Sbjct: 296 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 355
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ L+QG C +V +A+ KM + DA ++LI G + A++
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
LL ++E L Q T+ LI L R ++A +L ++ + P F + +
Sbjct: 416 LL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 474
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFE 588
K G + A +FL K +S P + Y E
Sbjct: 475 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 507
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 10/365 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T ++ + + D V+E MK G + ++ TY + + F + A
Sbjct: 319 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 378
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M P +LL+R + + FR+ E G + Y+ +
Sbjct: 379 MTLLNKMRACGVNPDAVTYNLLIRG--QCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 436
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR D+A + +++ G +P+ +T++ +I GLCK+G+ + A L++M GC
Sbjct: 437 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 496
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T++ I+ C L +M++K+ ++I+ L ++ +
Sbjct: 497 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 556
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---S 557
EM+ P T+ T + RL EA N+L M K + + +
Sbjct: 557 WGEMVSS-GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 615
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
G + A LK + SV P+ Y + R +D+L P + + ++
Sbjct: 616 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV---RMRLVEDVLPLTPAGVWKAIEL 672
Query: 617 SLLFG 621
+ +FG
Sbjct: 673 TDVFG 677
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 187/454 (41%), Gaps = 56/454 (12%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
++ + T+ +++ L K D ++A + F+ + + + +P++ ++ ++ L
Sbjct: 426 IADQYTYNALINALCK-DGRTDQACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKADIA 483
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
W L +M C + TY S + L K K + + L+ + + K++ V T+V
Sbjct: 484 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE--GLSFIGEMLQKDVKPSTVNYTIV- 540
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
+ +LKE R Y + A + V SG + +T
Sbjct: 541 --------------------------IHKLLKE-RNYGLVARTWGEMVS--SGCNPDVVT 571
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R + + NV+ EM K G +D Y + + AV + + M
Sbjct: 572 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 631
Query: 329 DGPYKPSVQDCSLLLRSI------------------SSINNPDLGLVFRVANKYESLGNS 370
P+ +LLR + +I D+ +F V K E L NS
Sbjct: 632 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 691
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y I ++ GR +EA ++ MK + Y+ ++ CK+ R+ DA +
Sbjct: 692 ---GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 748
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ M ++G IP + ++ L+ G + D+A F K+Y D + V+I+G +
Sbjct: 749 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 808
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ + + ++++ M+E++ RP T+ L E+L
Sbjct: 809 KGHSDISREMII-MLERMNCRPSHQTYAMLTEEL 841
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 192/498 (38%), Gaps = 54/498 (10%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
+P +Y+ +++ L N + ++ + LRRMKE Y +++ + +KA +
Sbjct: 251 QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKE--- 307
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR-- 243
+ M++E+ +A +V + K G+ +SD + L +LR
Sbjct: 308 ----AEEMLQEMFEKGLAPCVVTCTAVINAYCKEGR--------MSDALRVLELMKLRGC 355
Query: 244 ---IYPVKAL--GFFRWVGEH-----------SGYKHNTITYNGILRVLARHESVRDFWN 287
++ AL GF H G + +TYN ++R + +
Sbjct: 356 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 415
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ M+ +G D TY + K + A LF+ + KP+ + L+ +
Sbjct: 416 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLC 475
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
D+ ++ K S G + Y L K+ E + M +P
Sbjct: 476 KSGKADIA--WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPS 533
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ VI L K + EM +GC PD+ T+T ++ +C ++ A
Sbjct: 534 TVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLM 593
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M + D + L++G S + + A +L +M + P Q T+ L+ L+
Sbjct: 594 EMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASV-PNQFTYFILLRHLVRM 652
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT--VEDASEFLKALSVKEYPSSAAYLQ 585
R +E+ + L P ++ FG V +EFL P+S Y
Sbjct: 653 RLVEDVLPLT--------PAGVWKAIELTDVFGLFDVMKKNEFL--------PNSGTYSS 696
Query: 586 VFESFFNEGRHYEAKDLL 603
+ E F +GR EA L+
Sbjct: 697 ILEGFSEDGRTEEATSLV 714
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 111/238 (46%), Gaps = 9/238 (3%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y+ + R+L + A + + M +G+ PD T++ +I G C+ + + A ++
Sbjct: 152 TAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF 211
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D+M G D+ ++ LI+G C A +D A+ F +M + D + L+ G +
Sbjct: 212 DKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQP----DMHMYAALVKGLCNA 267
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+R +L M E + RP + +++ R+ +EA +L+ M ++ P
Sbjct: 268 ERGEEGLLMLRRMKE-LGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326
Query: 552 FVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I+ + G + DA L+ + ++ P+ Y + + F NEG+ ++A LL K
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 384
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 108/259 (41%), Gaps = 14/259 (5%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYD-GIHRALTKLGRFDEAEKMMKAM----KNAGFEPDN 408
L + V + SL + ++D L L RF A ++ ++A P
Sbjct: 94 LAVALPVVLRLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTA 153
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TY+ VI LC+ A L M +G PD T+ LI G+C N+VD A F K
Sbjct: 154 PTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 213
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M + + D LI G R++ A +L EM + P + L++ L A
Sbjct: 214 MPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ-----PDMHMYAALVKGLCNAE 268
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYL 584
R EE + +LR MK+ + P + V + + ++A E L+ + K P
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328
Query: 585 QVFESFFNEGRHYEAKDLL 603
V ++ EGR +A +L
Sbjct: 329 AVINAYCKEGRMSDALRVL 347
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 116/303 (38%), Gaps = 53/303 (17%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N +T+N ++ L + W +E+M G D TY K +
Sbjct: 456 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 515
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ + M+ KPS + ++++ + + + GLV R +
Sbjct: 516 QEGLSFIGEMLQKDVKPSTVNYTIVIHKL--LKERNYGLVARTWGE-------------- 559
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
M ++G PD +TY+ + C GR +A NVL EM +N
Sbjct: 560 ---------------------MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 598
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN-- 495
G D + L+ GH + + D A+ +M + +L+ + + V
Sbjct: 599 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 658
Query: 496 ------GAYKL--------LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
G +K L ++++K P T+ +++E R EEA +L+ LMK
Sbjct: 659 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 718
Query: 542 KQN 544
+ +
Sbjct: 719 EDS 721
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 114/243 (46%), Gaps = 20/243 (8%)
Query: 371 LSKSVYDGIHR---------------ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
L++SV+DGI + KLG DE ++ AM +G +PD TYS +I
Sbjct: 154 LAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLI 213
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCK + ++A + DEM + G +P+ T+T LI GHC ++D A+ + +M+ + +
Sbjct: 214 NGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFS 273
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D + LI G + + A L EM K L+P + T+ TLI+ LE A
Sbjct: 274 PDXITYNTLIYGLCKKGDLXQAKDLXDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFE 332
Query: 536 LLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFF 591
+ M K+N + IS K G DA + L+ LSV P + Y V F
Sbjct: 333 YRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFC 392
Query: 592 NEG 594
G
Sbjct: 393 KNG 395
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
E+R+ G +W G + + +++N ++ + + + + + M G + D
Sbjct: 151 EIRLAQSVFDGITKW-----GLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPD 205
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ TY + K M++A KLF+ M+D P+ + L+ N L L +
Sbjct: 206 VYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDG--HCKNGKLDLAMEI 263
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ S G S Y+ + L K G +A+ + M G +PD ITY+ +I G CK
Sbjct: 264 YKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCK 323
Query: 421 AGRFEDACNVLDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
G E A M +EN + D+ ++T LI G C A +M+ D
Sbjct: 324 EGDLETAFEYRKRMIKENIRLDDV-SYTALISGLCKEGRSVDAEKMLREMLSVGLKPDTG 382
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEM 504
++++ F V KLL EM
Sbjct: 383 TYTIVMHEFCKNGDVKMGSKLLKEM 407
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ + + ++M +G+ D TY + K + A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ S DL F + L Y +
Sbjct: 296 KDLXDEMSMKGLKPDKITYTTLIDG--SCKEGDLETAFEYRKRMIKENIRLDDVSYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR +AEKM++ M + G +PD TY+ V+ CK G + +L EM+ +G +
Sbjct: 354 SGLCKEGRSVDAEKMLREMLSVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHV 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PCVIT 418
>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1084
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 164/365 (44%), Gaps = 25/365 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L R + ++ M EG + + + + + K R A KLF
Sbjct: 313 NVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLF 372
Query: 325 EFMMDGPYKPSVQDCSLLLRSISS----INNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+ +P ++ + S+ S ++ L LV + ++ LG L+K
Sbjct: 373 KKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFA 432
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L G+FD+A K++ M GF PD+ TYS+VI LC A + E A ++ +EM+ NG +
Sbjct: 433 RCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIV 492
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+TILI C A + +A F +M+ K + LI+ +L K++ A +L
Sbjct: 493 PSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADEL 552
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK------------KQNYPPF 548
EM+ +P T+ LI+ A ++E+A + M+ K ++
Sbjct: 553 F-EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNC 611
Query: 549 PEP-------FVQYISKFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P V + K V++A E L L+ P+ Y V + F G+ +A+
Sbjct: 612 EGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQ 671
Query: 601 DLLYK 605
++ K
Sbjct: 672 EVFTK 676
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 158/367 (43%), Gaps = 26/367 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA F + + +G + TY ++ + ++ +EM +G ++ TY +
Sbjct: 478 KAFSLFEEM-KRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTAL 536
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSIN 350
+ K + M A +LFE M+ KP+V + C + R I
Sbjct: 537 IHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIE 596
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ D+ F++ + N ++ Y + L K R EA +++ M G EP+ I
Sbjct: 597 SSDMDKYFKLDHNNCEGPNVIT---YGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIV 653
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y VI G CK G+ +DA V +M E G P++ T++ I N +D L +KM+
Sbjct: 654 YDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKML 713
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
E + + + +++G + + AYKL+++M EK P T+ +I+ + ++
Sbjct: 714 ENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK-GCNPNVVTYTAMIDGFGKSGKI 772
Query: 531 EEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQV 586
E+ + L R M + P + + G +++A + L + +P ++ ++
Sbjct: 773 EQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKI 832
Query: 587 FESFFNE 593
E F E
Sbjct: 833 IEGFSQE 839
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 177/422 (41%), Gaps = 59/422 (13%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF--W 286
+L+D+ V+ V+ ++ P + FF W G GY H ++ +L +L + + D
Sbjct: 103 QLNDSLVVEVMNNVK-NPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPL 161
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ E+K + +E+ + R+ + A++ + D YKPS + L++
Sbjct: 162 KFLMEIKDDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVF 221
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ D + V + S + + +L K G+ EA ++ ++ F P
Sbjct: 222 LRADKLDTA--YLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAED--FVP 277
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D + Y++++ GLC+A FE+A ++L M + CIP++ T+ IL+ G ++ R
Sbjct: 278 DTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRIL 337
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT------- 519
+ M+ + + ++ + LI+ + + + AYKL +MI K +P +
Sbjct: 338 SMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMI-KCGCQPGYLVYNIFIGSVCS 396
Query: 520 -----------LIEK-----------------------LLGARRLEEAMNLLRLMKKQNY 545
L+EK L GA + ++A ++ M + +
Sbjct: 397 NEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGF 456
Query: 546 PPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYE 598
P + + I G + DAS+ KA S+ E PS Y + +SF G +
Sbjct: 457 VPDDSTYSKVI---GFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQ 513
Query: 599 AK 600
A+
Sbjct: 514 AR 515
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 111/243 (45%), Gaps = 16/243 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + ++ +M+++G ++ TY + F K +E ++LF
Sbjct: 720 NVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELF 779
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLS-KSVYDGIH 380
M P+ +L+ S N L +++ ++ + + LS + + +G
Sbjct: 780 RDMCSKGCAPNFITYRVLINHCCS--NGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFS 837
Query: 381 RA-LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG- 438
+ +T +G DE + N D++ Y +I KAGR E A ++L+E+ +
Sbjct: 838 QEFITSIGLLDELSE------NESVPVDSL-YRILIDNYIKAGRLEVALDLLEEISSSPS 890
Query: 439 -CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+ + + LI+ A++VD+AL +A M+ KN + +L LI G + + A
Sbjct: 891 HAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEA 950
Query: 498 YKL 500
+L
Sbjct: 951 LQL 953
>gi|199601721|dbj|BAG70980.1| pentatricopeptide (PPR) repeat-containing protein [Musa balbisiana]
Length = 788
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 42/335 (12%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ + + + VL VL+ R +P AL FFRWV E +G++H+ TY I+
Sbjct: 128 WTTRLQNSIRSLARSFDQSLVLAVLRGAR-HPDHALHFFRWV-EKTGFRHDPDTYREIIL 185
Query: 275 VLARHESVRDFWNV-VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+LAR + + +++M D + + + R+ ++AVK+F +
Sbjct: 186 LLARASMLNHARCILLDDMPDRLVPPSEDMFASLIEGYGCARIPQEAVKIFRRL------ 239
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+LG+ V + YD + +A+ + GR A
Sbjct: 240 ------------------PELGVTRTVRS-------------YDAVFKAILRSGRVAMAR 268
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ AM G P TY+ +++G C + + E A +M+E G PD+ T+ ++ G
Sbjct: 269 RLFNAMIAEGVLPVLSTYNTLLWGFCLSIKMETAQRFFADMKERGIAPDLVTYNTILNGW 328
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
A ++D A FA+M + ++ +++I G++ RV+ ++ EM EK LR
Sbjct: 329 ARAKKMDDAEKVFAEMTAAGFAPNSISYNIMIKGYVCSGRVDDGLRMFSEMGEK-GLRFS 387
Query: 514 QATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPP 547
+ TF L+ L R EA L M K P
Sbjct: 388 EKTFAALMPGLCDDVGRAAEARKALNEMAKLQLTP 422
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 115/573 (20%), Positives = 214/573 (37%), Gaps = 90/573 (15%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + L+ V+ VLR + P+ A FF WV +K FR Y ++
Sbjct: 128 WTTRLQNSIRSLARSFDQSLVLAVLRGARH-PDHALHFFRWV-EKTGFRHDPDTYREIIL 185
Query: 138 NLVNKDSLKQF-WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
L L + L M + E+ + S++ + A + Q + +
Sbjct: 186 LLARASMLNHARCILLDDMPDRLVPPSEDMFASLI-------EGYGCARIPQEAVKIFRR 238
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ V +T+ +D L ++ ++ ++ E + PV +
Sbjct: 239 LPELGVTRTV------RSYDAVFKAILRSGRVAMARRLFNAMIAE-GVLPVLS------- 284
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
+NT+ + L + + E+ + F+ +MK+ G D+ TY I + + +
Sbjct: 285 ------TYNTLLWGFCLSI--KMETAQRFF---ADMKERGIAPDLVTYNTILNGWARAKK 333
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
M+DA K+F M + P+ +++++ D GL R+ ++ G S+ +
Sbjct: 334 MDDAEKVFAEMTAAGFAPNSISYNIMIKGYVCSGRVDDGL--RMFSEMGEKGLRFSEKTF 391
Query: 377 DGIHRALTK-LGRFDEAEKMMKAMKNAGFEP----------------------------- 406
+ L +GR EA K + M P
Sbjct: 392 AALMPGLCDDVGRAAEARKALNEMAKLQLTPSDKSIFLRLVTSLCESGDLEGALEVHRKT 451
Query: 407 --------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI--PDIKT-----WTILIQ 451
D + Y ++ LCK + E A +LDE+ E G + P T + +I+
Sbjct: 452 SQFNHVVVDPMQYGVLLESLCKGEKHESAIALLDELLEKGTMQSPQYPTLEPSAYNPMIE 511
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C + +A F ++M+K D D + LI G + A ++L M
Sbjct: 512 YLCDHGDTKKAEAFFRQLMKKGVD-DKVAFNSLIRGHAKEGMPEAASEILTIMTRHG--V 568
Query: 512 PWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
P A ++ L+E L +A L M +Q + P F + G V+ AS
Sbjct: 569 PTDADSYVLLVESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVALFDDGRVQTASR 628
Query: 568 FLKALSVKEYPSSAAYL-QVFESFFNEGRHYEA 599
+K++ K + + ++ ++ F G EA
Sbjct: 629 VMKSMIEKGVKENMDMVHKILDALFMRGHVEEA 661
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 100/237 (42%), Gaps = 3/237 (1%)
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+L S Y+ + L G +AE + + G + D + ++ +I G K G E A
Sbjct: 500 TLEPSAYNPMIEYLCDHGDTKKAEAFFRQLMKKGVD-DKVAFNSLIRGHAKEGMPEAASE 558
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+L M +G D ++ +L++ +E A MME+ + A L ++
Sbjct: 559 ILTIMTRHGVPTDADSYVLLVESFLKKSEPADARTALDSMMEQGHLPSASLFRSVMVALF 618
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
RV A +++ MIEK ++ +++ L +EEA+ + LM + P
Sbjct: 619 DDGRVQTASRVMKSMIEK-GVKENMDMVHKILDALFMRGHVEEALGRINLMIMNDCTPDI 677
Query: 550 EPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + + +A + ++ AL S ++Y +V + + G+ A +L K
Sbjct: 678 DHLLITLCDSDKATEAQKLVEFALERDCDVSFSSYDRVLDVLYTAGKTLPAYSILCK 734
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 106/277 (38%), Gaps = 45/277 (16%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA FFR + + + + +N ++R A+ ++ M + G D D+Y+ +
Sbjct: 521 KAEAFFRQLMKKG--VDDKVAFNSLIRGHAKEGMPEAASEILTIMTRHGVPTDADSYVLL 578
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K DA + MM+ + PS
Sbjct: 579 VESFLKKSEPADARTALDSMMEQGHLPSA------------------------------- 607
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
S++ + AL GR A ++MK+M G + + +++ L G E+A
Sbjct: 608 ------SLFRSVMVALFDDGRVQTASRVMKSMIEKGVKENMDMVHKILDALFMRGHVEEA 661
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++ M N C PDI I + A E + L+ FA +E++ D D +++
Sbjct: 662 LGRINLMIMNDCTPDIDHLLITLCDSDKATEAQK-LVEFA--LERDCDVSFSSYDRVLDV 718
Query: 488 FLSQKRVNGAYKLLVEMIEK---VRLRPWQATFKTLI 521
+ + AY +L ++ K V + A K+LI
Sbjct: 719 LYTAGKTLPAYSILCKIKAKGGVVDKKGCDAIIKSLI 755
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 153/333 (45%), Gaps = 11/333 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ + T+N ++ R V ++ ++M G+ D+ +Y + + +++
Sbjct: 4 SGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDE 63
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
AV+LF M +P + + L++ + + + GL+ + + + LG S Y +
Sbjct: 64 AVELFGEM----DQPDMHMYAALVKGLCNAERGEEGLL--MLRRMKELGWRPSTRAYAAV 117
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + EAE+M++ M G P +T + VI CK GR DA VL+ M+ GC
Sbjct: 118 VDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGC 177
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ L+QG C +V +A+ KM + DA ++LI G + A++
Sbjct: 178 KPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFR 237
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
LL ++E L Q T+ LI L R ++A +L ++ + P F + +
Sbjct: 238 LL-RLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFE 588
K G + A +FL K +S P + Y E
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIE 329
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 150/365 (41%), Gaps = 10/365 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T ++ + + D V+E MK G + ++ TY + + F + A
Sbjct: 141 GLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKA 200
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M P +LL+R + + FR+ E G + Y+ +
Sbjct: 201 MTLLNKMRACGVNPDAVTYNLLIRG--QCIDGHIESAFRLLRLMEGDGLIADQYTYNALI 258
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR D+A + +++ G +P+ +T++ +I GLCK+G+ + A L++M GC
Sbjct: 259 NALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCT 318
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T++ I+ C L +M++K+ ++I+ L ++ +
Sbjct: 319 PDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVART 378
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---S 557
EM+ P T+ T + RL EA N+L M K + + +
Sbjct: 379 WGEMVSS-GCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 437
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
G + A LK + SV P+ Y + R +D+L P + + ++
Sbjct: 438 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV---RMRLVEDVLPLTPAGVWKAIEL 494
Query: 617 SLLFG 621
+ +FG
Sbjct: 495 TDVFG 499
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/454 (21%), Positives = 187/454 (41%), Gaps = 56/454 (12%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
++ + T+ +++ L K D ++A + F+ + + + +P++ ++ ++ L
Sbjct: 248 IADQYTYNALINALCK-DGRTDQACSLFDSL-ETRGIKPNAVTFNSLINGLCKSGKADIA 305
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD 208
W L +M C + TY S + L K K + + L+ + + K++ V T+V
Sbjct: 306 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQE--GLSFIGEMLQKDVKPSTVNYTIV- 362
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
+ +LKE R Y + A + V SG + +T
Sbjct: 363 --------------------------IHKLLKE-RNYGLVARTWGEMVS--SGCNPDVVT 393
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y +R + + NV+ EM K G +D Y + + AV + + M
Sbjct: 394 YTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMT 453
Query: 329 DGPYKPSVQDCSLLLRSI------------------SSINNPDLGLVFRVANKYESLGNS 370
P+ +LLR + +I D+ +F V K E L NS
Sbjct: 454 SVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNS 513
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y I ++ GR +EA ++ MK + Y+ ++ CK+ R+ DA +
Sbjct: 514 ---GTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVL 570
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ M ++G IP + ++ L+ G + D+A F K+Y D + V+I+G +
Sbjct: 571 VCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIK 630
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ + + ++++ M+E++ RP T+ L E+L
Sbjct: 631 KGHSDISREMII-MLERMNCRPSHQTYAMLTEEL 663
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 100/211 (47%), Gaps = 9/211 (4%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M +G+ PD T++ +I G C+ + + A ++ D+M G D+ ++ LI+G C A
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D A+ F +M + D + L+ G + +R +L M E + RP +
Sbjct: 61 IDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKE-LGWRPSTRAYA 115
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
+++ R+ +EA +L+ M ++ P I+ + G + DA L+ + ++
Sbjct: 116 AVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLR 175
Query: 576 EY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
P+ Y + + F NEG+ ++A LL K
Sbjct: 176 GCKPNVWTYNALVQGFCNEGKVHKAMTLLNK 206
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/365 (20%), Positives = 140/365 (38%), Gaps = 57/365 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N +T+N ++ L + W +E+M G D TY K +
Sbjct: 278 ETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGS 337
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++ + M+ KPS + ++++ + + + GLV R +
Sbjct: 338 QEGLSFIGEMLQKDVKPSTVNYTIVIHKL--LKERNYGLVARTWGE-------------- 381
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
M ++G PD +TY+ + C GR +A NVL EM +N
Sbjct: 382 ---------------------MVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKN 420
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN-- 495
G D + L+ GH + + D A+ +M + +L+ + + V
Sbjct: 421 GVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDV 480
Query: 496 ------GAYKL--------LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
G +K L ++++K P T+ +++E R EEA +L+ LMK
Sbjct: 481 LPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMK 540
Query: 542 KQNYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHY 597
+ + + + ++ F + DA + ++ + P +Y + EG+
Sbjct: 541 EDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTD 600
Query: 598 EAKDL 602
+AK++
Sbjct: 601 KAKEI 605
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 156/361 (43%), Gaps = 10/361 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD K+ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + +E ++ Y S+ ++L+ L VF K+
Sbjct: 108 LEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGL 167
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
++S ++ + +LG DE ++ AM+ +G +PD TYS +I GLCK + +
Sbjct: 168 RPTAVS---FNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDY 224
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + +EM +NG +P+ T+T LI GHC VD A+ + +M+ ++ D + LI
Sbjct: 225 ANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIY 284
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + A L+ EM K L+P + T+ TLI+ LE A + M K+N
Sbjct: 285 GLCKKGDLKQAQDLIDEMSMK-GLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIR 343
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ IS G DA + L+ LSV P Y + F +G + L
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKL 403
Query: 603 L 603
+
Sbjct: 404 M 404
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +++N ++ R + + + + M+ G + D+ TY + K M+ A
Sbjct: 166 GLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 226 NELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M G +PD +TY+ +I G CK G E A M +
Sbjct: 281 TLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTG 400
Query: 498 YKLLVEM 504
KL+ EM
Sbjct: 401 SKLMKEM 407
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 70/179 (39%), Gaps = 37/179 (20%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 277 ITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTT-------------------- 316
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++DG S DL F + L Y + L +
Sbjct: 317 LIDG-----------------SCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQE 359
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR +AEKM++ M + G +P+ TY+ +I CK G ++ EM+ +G +P + T
Sbjct: 360 GRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 163/383 (42%), Gaps = 37/383 (9%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ G++ + +TYN I+ + V+D V+++ +G++ D TY + F K +
Sbjct: 288 NGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPD 347
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANK--------YESLG 368
A+ +F+ + +PS+ + L++ +S + P L L+ +A Y +
Sbjct: 348 RAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVI 407
Query: 369 NSLSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N L K Y+ + K + D A +M+ M + G
Sbjct: 408 NGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMT 467
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD ITY+ ++ GLCKAG+ E+ + MEE GC P+I T+ I++ C A +V+ A+
Sbjct: 468 PDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDL 527
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M K D L GF ++GAY+L M ++ + AT+ ++
Sbjct: 528 LGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFS 587
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSA 581
+ AM L +MK P + + K G + +FL K + PS
Sbjct: 588 EQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLT 647
Query: 582 AYLQVFESFFNEGRHYEAKDLLY 604
+ +V + + +EA +++
Sbjct: 648 TFGRVLNCLCVKDKVHEAVGIIH 670
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 157/400 (39%), Gaps = 43/400 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D DP++A A F K RPS +Y+ +++ L + + + M E+ C
Sbjct: 343 DGDPDRAMAVFKDGLGK-GLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIW 401
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
TY ++ L K SD + L DD I K
Sbjct: 402 TYNLVINGLCKMGCVSDASHL----------------------------VDDAIAKGCPP 433
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I + + K+L++ + W G + ITYN +L L + +
Sbjct: 434 -DIFTYNTLIDGYCKQLKLDSATEMVNRMW---SQGMTPDVITYNTLLNGLCKAGKSEEV 489
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ + M+++G +I TY I K + + +AV L M KP V L
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549
Query: 346 ISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
I + D L R+ +Y+ + + Y+ I A ++ + A K+ MKN+G
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTT---ATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+PDN TY VI G CK G L E E IP + T+ ++ C ++V A+
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
M++K + + + F + K+V A K+LVE
Sbjct: 667 GIIHLMLQKGI-----VPETVNTIFEADKKVVAAPKILVE 701
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 125/555 (22%), Positives = 216/555 (38%), Gaps = 86/555 (15%)
Query: 99 VYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKED 158
V + K+ DP KA FN + F+ +++ Y +++ L + ++ L M+E+
Sbjct: 10 VAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMREN 69
Query: 159 -HCYIEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD 214
+ + E Y+ + G K ++A D F++ + + + LV+ +
Sbjct: 70 VNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGY-HN 128
Query: 215 WDDKIGKKLEDMKIELSDNFVLTV-----LKELRIYPVKALGFFRWVGEHSGYKHNTITY 269
K+ ++ D ++ SD + T+ K R P AL R + E G N + Y
Sbjct: 129 QAHKVYMRMRDRGVQ-SDVYTYTIRIKSFCKTAR--PYAALRLLRNMPE-LGCDSNAVAY 184
Query: 270 NGILRVL---ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
++ L H+ R+ + +EM D+ + K+ K ++ ++ +L
Sbjct: 185 CTVVAGLYDSGEHDHARELF---DEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLG- 240
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+L R + P+L F + + +L ++V +
Sbjct: 241 -------------KVLKRGVC----PNL-FTFNIFVQGLCREGALDRAVRNS-------- 274
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R EAE+ ++ M N GFEPD++TY+ +I G CK G +DA VL + G PD T+
Sbjct: 275 -RVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTY 333
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI G C + DRA+ F + K L + LI G Q + A +L+ EM E
Sbjct: 334 CSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAE 393
Query: 507 KVRL----------------------------------RPWQATFKTLIEKLLGARRLEE 532
L P T+ TLI+ +L+
Sbjct: 394 NGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDS 453
Query: 533 AMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFE 588
A ++ M Q P + + K G E+ E KA+ K P+ Y + +
Sbjct: 454 ATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVD 513
Query: 589 SFFNEGRHYEAKDLL 603
S + EA DLL
Sbjct: 514 SLCKAKKVNEAVDLL 528
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 7/296 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DA LF M+ PS+ D + +L +I+ +N D+ V + +K E+LG S +
Sbjct: 597 DDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDI--VIYLFHKMENLGISHDLYSFT 654
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + RF A ++ M GF+P +T ++ G C+ RF++A +++D M E
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ + +I G C +++ AL F M +K ADA + LI+G + R A
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+LL +M+++ ++ P F LI+ + L EA NL + M +++ P + I+
Sbjct: 775 ARLLRDMVKR-KIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833
Query: 558 KF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
F G + DA + K +P Y + F R + L + H
Sbjct: 834 GFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 153/350 (43%), Gaps = 15/350 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +T +L + ++ ++V+ M + G E ++ Y + K R + +A
Sbjct: 680 GFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNA 739
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN----PDLGLVFRVANKYESLGNSLSKSVY 376
+++F M K V D IS + N D + R K + N + +
Sbjct: 740 LEIFYGM---EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVI---FF 793
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K G EA+ + K M P+ +TY+ +I G C GR DA ++ D M
Sbjct: 794 TALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVS 853
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC PD+ T+ LI G C + V+ + F +M + DA + LI+G+ ++N
Sbjct: 854 KGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNV 913
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A K+ M++ + P T+ L++ L ++E+A+ ++ ++K + +
Sbjct: 914 AQKVFNRMVD-CGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIII 972
Query: 554 QYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
Q + + V++A ++L+ K A AY+ + G EA L
Sbjct: 973 QGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKL 1022
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 159/411 (38%), Gaps = 45/411 (10%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT + LR Y + + +F E G H+ ++ ++ R + +++ +M K
Sbjct: 71 LLTAIANLRRY--ETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMK 128
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
GY+ I T+ + F + DA L M+ Y+P+V + L+ + N D+
Sbjct: 129 LGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK--NGDV 186
Query: 355 GLVFRVANKYESLG----------NSLSKSVYDGIHR----------------------- 381
+ + N+ E G L+ Y G R
Sbjct: 187 NIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTA 246
Query: 382 ---ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
A K G DEA+++ K M + P+ +TY+ +I GLC GR A D M G
Sbjct: 247 LIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKG 306
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P++ T+ LI G C + V+ + F +M + D + LI+G+ ++ A
Sbjct: 307 CFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAK 366
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM---NLLRLMKKQNYPPFPEPFVQY 555
+ M+ + P T L+ L + AM N +R +K +
Sbjct: 367 DIFSWMVS-CGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHG 425
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K VE+A E L V+ P + Y + G EA +L +
Sbjct: 426 LCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRR 476
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 127/318 (39%), Gaps = 9/318 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG-YEMDIDTYIKISRQFQKFRMME 318
SGY+ N + YN ++ L ++ V ++ EM+K+G D+ TY +
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG-NSLSKSVYD 377
A ++ M P V + L+ + N D S+G N+++ Y+
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT---YN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L GR A+K M + G P+ +TY+ +I G CK+ R ED + M
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + D T+ LI G+C ++ A F+ M+ D +L++G + A
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI- 556
+M + A + +I L A ++EEA L + + P + I
Sbjct: 401 MVKFNDMRSGEKYLGIVA-YNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMIL 459
Query: 557 --SKFGTVEDASEFLKAL 572
K G +A E + +
Sbjct: 460 GLCKNGPRREADELFRRM 477
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 129/323 (39%), Gaps = 39/323 (12%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD------------------------ 353
EDA+ LF M+ PSV D + LL +I+++ +
Sbjct: 47 EDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTIL 106
Query: 354 ---------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
L L + K LG S + + R +A ++ +M +G+
Sbjct: 107 IHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGY 166
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI-PDIKTWTILIQGHCAANEVDRAL 463
EP+ + Y+ +I LCK G A +L+EME+ G + D+ T+ L+ G C + E +A
Sbjct: 167 EPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAA 226
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
M ++ + D LI+ F+ Q ++ A +L +M++ + P T+ +LI
Sbjct: 227 RILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQS-SIGPNTVTYNSLING 285
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKEYPSS 580
L RL A LM + P + I+ F VED + + + +
Sbjct: 286 LCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGD 345
Query: 581 A-AYLQVFESFFNEGRHYEAKDL 602
Y + + G+ AKD+
Sbjct: 346 TFTYNTLIHGYCQVGKLRVAKDI 368
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 108/243 (44%), Gaps = 4/243 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N I + ++ + ++ + N+ +EM + +I TY + F + DA +F
Sbjct: 789 NVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMF 848
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVYDGIHRAL 383
+ M+ P V + L+ + G+ ++ L G++ + Y+ +
Sbjct: 849 DLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFT---YNTLIHGY 905
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G+ + A+K+ M + G PD +TY+ ++ LC G+ E A +++++++N DI
Sbjct: 906 CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDI 965
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+IQG C ++V A F + K DA +I+G A KL
Sbjct: 966 ITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTR 1025
Query: 504 MIE 506
M E
Sbjct: 1026 MKE 1028
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 110/250 (44%), Gaps = 8/250 (3%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+FD+A + M + P + +++V+ + K +F+ + +ME G D+ ++T
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
ILI C + AL KMM+ + L L+NGF R A L+ M E
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAE- 713
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
+ L P + T+I L R L A+ + M+K+ + IS G D
Sbjct: 714 LGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623
A+ L+ + ++ P+ + + ++F EG EAK+ LYK IR+ ++L ++
Sbjct: 774 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKN-LYK--EMIRRSVHPNILTYNS 830
Query: 624 KSNKVTIPSR 633
N I R
Sbjct: 831 LINGFCIQGR 840
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 108/281 (38%), Gaps = 45/281 (16%)
Query: 364 YESLGNSLSKSVYDGIHRALTKLG-----RFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
Y S G S Y G +R + G RF++A + M + P + +++++ +
Sbjct: 17 YPSSGGGASARAYSG-YREKLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAI 75
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
R+E +ME G D+ ++TILI C + + AL KMM+ YD
Sbjct: 76 ANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSI 135
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMI--------------------------------- 505
L++GF + R++ A+ L+ M+
Sbjct: 136 VTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNE 195
Query: 506 --EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
+K RL T+ TL+ L + +A +LR M K+ P F I F G
Sbjct: 196 MEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQG 255
Query: 561 TVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+++A E K L P++ Y + GR Y AK
Sbjct: 256 NLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK 296
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 77/176 (43%), Gaps = 2/176 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ + V D + + M +EG D TY + + + + A +F
Sbjct: 310 NVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIF 369
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+M+ P + +LL + N ++G N S L Y+ + L
Sbjct: 370 SWMVSCGVTPDIITHCILLHGLCV--NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLC 427
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K + +EA ++ + G +PD TY+ +I GLCK G +A + M+E+G I
Sbjct: 428 KADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGII 483
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 95/251 (37%), Gaps = 16/251 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L H + + M +G ++ TY + F K R +ED +KLF
Sbjct: 275 NTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLF 334
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----YESLGNSLSKSVYDGIH 380
+ M + L+ + RVA S G + + +
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGK------LRVAKDIFSWMVSCGVTPDIITHCILL 388
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L G A M++ + Y+ +I GLCKA + E+A + + G
Sbjct: 389 HGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVK 448
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD +T+TI+I G C A F +M E A+ +G L + N L
Sbjct: 449 PDARTYTIMILGLCKNGPRREADELFRRMKEDGIICQAE------DGHLGEHGTNNQVSL 502
Query: 501 LVEMIEKVRLR 511
+I R R
Sbjct: 503 GTIIICPKRRR 513
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 2/189 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ + + V D + EM +G D TY + + + + A K+F
Sbjct: 859 DVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 918
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+D P + ++LL + NN + + + + Y+ I + +
Sbjct: 919 NRMVDCGVPPDIVTYNILLDCLC--NNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMC 976
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ + EA + +++ G + D I Y +I GLC+ G +A + M+E+G +P +
Sbjct: 977 RNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSER 1036
Query: 445 TWTILIQGH 453
+ ++ H
Sbjct: 1037 IYDETLRDH 1045
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 154/360 (42%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 54 ASAVFATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K R + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G IP+ T+T LI GHC VD A+ + M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M + N
Sbjct: 292 LCKKGDLKQAHXLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 410
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 98/228 (42%), Gaps = 2/228 (0%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + TY+ ++ L + + D + +EM +G + T+ + K ++
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDL 265
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++++ M+ P + + L+ + DL + ++ G K Y +
Sbjct: 266 AMEIYKXMLSQSLLPDLITYNTLIYGLC--KKGDLKQAHXLIDEMSMKGLKPDKFTYTTL 323
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D A K K M D++ Y+ +I GLC+ GR DA +L EM G
Sbjct: 324 IDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PDI T+T++I C +V + +M + +VL+NG
Sbjct: 384 KPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 7/292 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + + YN ++ L ++ V++ V M G D TY + F + +
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVY 376
E A+++ M+ + PS +CS + I + +L F +A K LG + Y
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFM---IDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K RFD+A+++ K M G EP+ +TY+ +I LCK G EDA + D+M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + LI G+C +DRA + M+++ A LI G ++
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461
Query: 497 AYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L EM E R W TF LI ++++EA L M N P
Sbjct: 462 CMELHREMAE--RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L ++E D + +EM G E + TY + K M+EDA
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M D K +V Y SL N K
Sbjct: 393 LCLFDKMRDKGIKVTVY-------------------------PYNSLINGYCKQ------ 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G D A ++ M G P +YS +I GLC+ G + EM E G
Sbjct: 422 ------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+T LI G C ++D A F KM++ N + +V+I G+ + A++L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL 524
+M+E + L+P T+++LI L
Sbjct: 536 YDQMVE-MGLKPDNYTYRSLISGL 558
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIY-PVKALGFFRWVGEHSGYKHNTITYNGIL 273
WD+ + +K++L +F + V L+ + K+ FR + E G K + I Y ++
Sbjct: 606 WDEM---AVRGVKLDLV-SFTIIVYAALKQHDKEKSCVLFREMKEQ-GVKPDDIFYTCMI 660
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
L++ E++ N ++M +GY + T+ + K + A L + M+ G
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+ + L ++ + + A L + +S ++ + + L K G+ EA
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVS---FNILIKGLCKAGKIQEAI 777
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+M + +GF PD I+YS +I LCK G A + +EM G PD+ + I I+
Sbjct: 778 DLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWC 837
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
E D+AL + M+ + D L++G
Sbjct: 838 NVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 13/244 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L + VY RA + D A ++ M++ G + + Y+ +++GLCK R ++A
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V + M G D T+ L+ G C E++ AL M+ + +I+
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ V A+ L ++ + + + P + LI+KL R ++A L + M + P
Sbjct: 313 LRKKELVEEAFSLACKLGD-LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP 371
Query: 548 FPEPF---VQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + + K G +EDA K + V YP Y + + +G A
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRA 427
Query: 600 KDLL 603
+ LL
Sbjct: 428 RGLL 431
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +Y+ ++ L R+ + + EM + G + T+ + F K + M++A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------PDLGL------------- 356
+LF+ M+D P+ ++++ + N ++GL
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 357 -------------VFRVANKYESLGN-SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
V + N Y L N SL+ +Y G R GRF E + M
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLY-GFFRE----GRFTETYHLWDEMAVR 612
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + D ++++ +++ K E +C + EM+E G PD +T +I + +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L C+ +M+ Y + VLIN + A L EM+ + P + T+ ++
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAG-NVLPNKFTYNCFLD 731
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKEY-PS 579
+E+A +L M + + ++ + K G +++A + + ++ + P
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 791
Query: 580 SAAYLQVFESFFNEGRHYEA----KDLLYK 605
+Y + G +A ++LYK
Sbjct: 792 CISYSTIIHELCKMGDINKAFELWNEMLYK 821
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ + E + + + EMK G + ++ TY F K M+++A+K F
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M P+ + L+ + N L ++ + G L+ Y + L
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGN--LAEALKLVEEILQAGIKLNVVTYTALLDGLC 441
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR EAE++ +AM NAG P+ TY+ ++ G KA E A ++L EM+E PD+
Sbjct: 442 EEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLL 501
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ++ G C + ++ A L ++ E + +A + L++ + + A LL EM
Sbjct: 502 LYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEM 561
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
++ + L + T+ LI+ L + ++EAM+ M + P V + K
Sbjct: 562 LD-LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNC 620
Query: 562 VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA---KDLLYKCPHHIRQDSKIS 617
E A + F + L P AY + + G EA +D + + + + +
Sbjct: 621 FEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTA 680
Query: 618 LLFGSAKSNKV 628
L++G + S +V
Sbjct: 681 LIWGLSHSGQV 691
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 155/373 (41%), Gaps = 19/373 (5%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF+ +G +G K + TYN ++ L + + ++ +MK+ G+ DI TY +
Sbjct: 242 FFKDMGA-AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGH 300
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ++++ + +FE M D P V + L+ F +E N L
Sbjct: 301 GKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFL----HEMKANGL 356
Query: 372 SKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+V Y A K G EA K M+ P+ TY+ +I CKAG +A
Sbjct: 357 KPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALK 416
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+++E+ + G ++ T+T L+ G C + A F M+ + + L++GF+
Sbjct: 417 LVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFI 476
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
K + A +L EM EK ++P + T++ L RLEEA L+ +K+
Sbjct: 477 KAKEMEYAKDILKEMKEKC-IKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNA 535
Query: 550 EPFVQYISKFGTVEDASEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + + A+E L + L + + Y + + G EA
Sbjct: 536 VIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAM----- 590
Query: 606 CPHHIRQDSKISL 618
HH + S+I L
Sbjct: 591 --HHFGRMSEIGL 601
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 173/422 (40%), Gaps = 35/422 (8%)
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
++V WDD L D L+ + VL EL AL FF W G++H +
Sbjct: 76 EIVREQRWDDFRIVSLFDSA--LAPIWASRVLVELCQDARLALRFFEWAKGRIGFQHTSE 133
Query: 268 TY----------------NGILRVLARHESVRDFWNVVEEM--KKEGYEMDIDTYIKISR 309
Y N +L+ L V W+V + + + + +
Sbjct: 134 AYCILVHILFCARFYSDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFS 193
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ M+E+A + F M P + C+ LL +S + DL F ++ +G
Sbjct: 194 ALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKF-----FKDMGA 248
Query: 370 S-LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ + +SV Y+ + L K G + A + MK AGF PD +TY+ +I G K G ++
Sbjct: 249 AGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDE 308
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ ++M++ C PD+ T+ LI C + +A +M + I+
Sbjct: 309 CICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFID 368
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL----LRLMKK 542
F + + A K V+M +V L P + T+ +LI+ A L EA+ L L+ K
Sbjct: 369 AFCKEGMLQEAIKFFVDM-RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIK 427
Query: 543 QNYPPFPEPFVQYISKFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
N + + + + G +++A E +A L+ P+ Y + F AKD
Sbjct: 428 LNVVTYT-ALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKD 486
Query: 602 LL 603
+L
Sbjct: 487 IL 488
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 129/319 (40%), Gaps = 34/319 (10%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G K N +TY +L L +++ V M G + +TY + F K + ME
Sbjct: 423 QAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEME 482
Query: 319 DAVKLFEFMMDGPYKPSV----------------QDCSLLLRSI--SSINNPD------L 354
A + + M + KP + ++ LL+ I S IN +
Sbjct: 483 YAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLM 542
Query: 355 GLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
F+ E+L G ++ Y + L K G EA M G +
Sbjct: 543 DAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQ 602
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ Y+ ++ GLCK FE A + DEM + G +PD +T LI G+ + AL
Sbjct: 603 PNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNL 662
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M+E + D LI G +V A LL EMI K L P + + LI+K
Sbjct: 663 RDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVL-PDEVVYMCLIKKYY 721
Query: 526 GARRLEEAMNLLRLMKKQN 544
+++EA+ L M K+
Sbjct: 722 ALGKVDEALELQNEMAKRG 740
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 92/214 (42%), Gaps = 12/214 (5%)
Query: 256 VGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+GE SG N + Y ++ + + ++EEM G TY + K
Sbjct: 523 IGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCK 582
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSL 371
++++A+ F M + +P+V + L+ + N F VA K E L +
Sbjct: 583 SGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNN------CFEVAKKLFDEMLDKGM 636
Query: 372 --SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
K Y + K G EA + M G E D Y+ +I+GL +G+ + A N
Sbjct: 637 MPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARN 696
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+LDEM G +PD + LI+ + A +VD AL
Sbjct: 697 LLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEAL 730
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 2/183 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +TY ++ L + V++ + M + G + ++ Y + K E A
Sbjct: 565 GLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVA 624
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ M+D P + L+ ++ + +L + ++ +G L Y +
Sbjct: 625 KKLFDEMLDKGMMPDKIAYTALIDG--NMKHGNLQEALNLRDRMIEIGMELDLHAYTALI 682
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+ G+ +A ++ M G PD + Y +I G+ ++A + +EM + G I
Sbjct: 683 WGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
Query: 441 PDI 443
+
Sbjct: 743 TGL 745
>gi|449485877|ref|XP_004157297.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g07740, mitochondrial-like [Cucumis sativus]
Length = 460
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 45/354 (12%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P +AL F E G+KH+ +Y+ ++ LAR ++ ++ + ++
Sbjct: 62 PCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ + + K ++E ++LF M PS FR +
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQM------PSFN-------------------CFRTLQSFN 155
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
L N+L +F +A ++ + GF P++++Y+ +I G K G +E
Sbjct: 156 VLLNTL------------VDCDQFSKASEIFQQAYEMGFRPNSVSYNIMIKGWIKKGGWE 203
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
ACN+ DEM E G P + T+ + C E+D AL F M EK + +A +L+
Sbjct: 204 QACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLM 263
Query: 486 NGFLSQKRVNGAYKLLVEM-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
G+ + A KL+ +M +LRP + L+ L ++E +LL MKK+
Sbjct: 264 EGWCFIGKYKEAKKLMFDMEFHGCKLRP--VNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 545 YPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
P + V Y+ K G V DA + L + V P++A Y + + + N G
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAG 375
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 10/270 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ N+++YN +++ + N+ +EM ++G + + TY + M+ A
Sbjct: 181 GFRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSXLGVLCRKGEMDTA 240
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSKSVY 376
+ LF+ M + + P+ +LL+ I ++ A K E G L Y
Sbjct: 241 LCLFKNMTEKGHHPNAVTYALLMEGWCFIGK------YKEAKKLMFDMEFHGCKLRPVNY 294
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ L K G DE E ++ MK +PD +TY+ ++ LCK G+ DA VL +M+
Sbjct: 295 GVLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQV 354
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC P+ T+ ++I G+C A + D A+ M+ + L+ G L + +
Sbjct: 355 GGCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDD 414
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++E +EK +LR T++ LI + G
Sbjct: 415 YVCFVLEEMEKRQLRFDAETWRILIMDVCG 444
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 11/226 (4%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA + + GF+ +YS +I+ L ++ RFE +L + + + LI
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
Q + A+ V++ + F +M N +VL+N + + + A ++ + E +
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE-MGF 182
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
RP ++ +I+ + E+A NL M ++ P V Y S G + E
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQP---SVVTYNSXLGVLCRKGEMDT 239
Query: 571 ALSV-------KEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
AL + +P++ Y + E + G++ EAK L++ H
Sbjct: 240 ALCLFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 285
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 145/319 (45%), Gaps = 29/319 (9%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I + L + ++LS + V VL + + FF W + + +YN ++R L R
Sbjct: 120 IERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRALGR 179
Query: 279 HESVRDFWNVVEEMKKEGYEMD-------IDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+ + + E++ EG M+ ID+ ++ R ++ +M + + F F D
Sbjct: 180 RKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEEEFGFERDA- 238
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDGIHRALTK 385
+ ++LL+ + ++ AN Y NS+ + Y+ I +K
Sbjct: 239 -----ESLNVLLQCLCRRSH------VGAANSYF---NSVKGKIPFNCMTYNVIIGGWSK 284
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR E +++ + M+ GF PD +++S ++ GL +AG+ EDA + MEE GC+PD
Sbjct: 285 FGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNV 344
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ +I + D + + ++ KN D + D +I+G + +V A ++ EM+
Sbjct: 345 YNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEML 404
Query: 506 EKVRLRPWQATFKTLIEKL 524
++ + T + IE L
Sbjct: 405 DRGMVTK-TGTVTSFIEPL 422
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 139/344 (40%), Gaps = 49/344 (14%)
Query: 237 TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV---RDFWNVVEEMK 293
++++ R+Y KA+ F + E G++ + + N +L+ L R V ++N V
Sbjct: 211 SLVRARRVY--KAIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSV---- 264
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-P 352
K + TY I + KF + + ++FE M + + P S LL +
Sbjct: 265 KGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIE 324
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
D ++F E G +VY+ + +G FDE K + + + +P+ TY+
Sbjct: 325 DAVMIF---GSMEEKGCVPDTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYT 381
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK---- 468
++I GL KA + DA + DEM + G + T T I+ C+ A++ + K
Sbjct: 382 RMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKV 441
Query: 469 -------------------------------MMEKNYDADADLLDVLINGFLSQKRVNGA 497
M E Y +D ++ + LI+G + + A
Sbjct: 442 GCKISLSAYKLLLMRLSRFGKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENA 501
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++ E + K P + L KLL + ++E A L +K
Sbjct: 502 VLVMEESMRK-GFCPSRFICSKLNNKLLASNKVERAYRLFLKIK 544
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 371 LSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+SK V Y+ + RAL + D K + ++ G ++ T+S VI L +A R A
Sbjct: 163 ISKDVDSYNVVIRALGRRKFIDFMVKFLHELRVEGVSMNSETFSIVIDSLVRARRVYKAI 222
Query: 429 NVLDEMEEN-GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EE G D ++ +L+Q C + V A F + K + +V+I G
Sbjct: 223 QMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGK-IPFNCMTYNVIIGG 281
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ RV+ ++ EM E+ P +F L+E L A ++E+A+ + M+++ P
Sbjct: 282 WSKFGRVSEMQRVFEEM-EEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVP 340
Query: 548 FPEPFVQYISKFGTVEDASEFLK 570
+ IS F +V + E +K
Sbjct: 341 DTNVYNAMISNFISVGNFDECMK 363
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 131/290 (45%), Gaps = 4/290 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + +TYN ++ R + + + +++ M +G + + TY I K
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A + + M+ P ++LL + N ++ R+ ++ S G +
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILL--VECCRNDNMMDAERIFDEMPSQGVVPDLVSFS 241
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L+K G D+A K + MKNAG PDN+ Y+ +I G C+ G +A V DEM E
Sbjct: 242 ALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQ 301
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC+ D+ T+ ++ G C + A F +M E+ D LING+ +N A
Sbjct: 302 GCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKA 361
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYP 546
L MI++ L+P T+ TLI+ +E+ L ++ ++ YP
Sbjct: 362 VTLFEMMIQR-NLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYP 410
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 33/282 (11%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G + +TYN IL L + + + + + EM + G D T+ + + K M
Sbjct: 300 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 359
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISS-----------------------------I 349
AV LFE M+ KP V + L+ I
Sbjct: 360 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 419
Query: 350 NN-PDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N ++G V FR+ ++ G + + I + + G +A++ + M G
Sbjct: 420 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 479
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD ITY+ +I G K + A ++++ME +G +PD+ T+ +++ G + A L
Sbjct: 480 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 539
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
KM+E+ + D LING ++Q + A+++ EM+++
Sbjct: 540 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 581
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/360 (20%), Positives = 145/360 (40%), Gaps = 52/360 (14%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + +Y++++ + + M E C ++ TY +IL L K K S+ L
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 329
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
F + + + D T ++ G D + K + ++ + N
Sbjct: 330 --FTEMTERGVFPD--FYTFTTLINGYSKDGNMNKAVTLFEMMIQRNL------------ 373
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDT 303
K + +TYN ++ + E V + WN + + + Y I
Sbjct: 374 ----------------KPDVVTYNTLIDGFCKGSEMEKVNELWN--DMISRRIYPNHISY 415
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
I I+ + + +A +L++ M++ ++ ++ C+ +++ N
Sbjct: 416 GILIN-GYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNA--------VKA 466
Query: 364 YESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
E L N L K + Y+ + K D A ++ M+N+G PD ITY+ ++ G
Sbjct: 467 DEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNG 526
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+ GR ++A ++ +M E G PD T+T LI GH N + A +M+++ + D
Sbjct: 527 FSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 107/246 (43%), Gaps = 8/246 (3%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
FRV +S G +S + + + L K+G D A ++ + + +G + + T + +I
Sbjct: 50 FRV---LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINA 106
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCK + E+ + L +MEE G PD+ T+ LI +C ++ A M K
Sbjct: 107 LCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPC 166
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ +ING + A +L EM+ K+ + P AT+ L+ + + +A +
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEML-KIGMSPDTATYNILLVECCRNDNMMDAERIF 225
Query: 538 RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNE 593
M Q P F + +SK G ++ A ++ + + + P + Y + F
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285
Query: 594 GRHYEA 599
G EA
Sbjct: 286 GVMSEA 291
>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Brachypodium distachyon]
Length = 886
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 140/305 (45%), Gaps = 5/305 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + + YN ++ L +++ VR+ +V M G D T + F + ++ A
Sbjct: 227 GDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMA 286
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+++ M + PS +CS +L + + FR+A + L + Y+ +
Sbjct: 287 LEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEA--FRLACQLGELRMVPNIFAYNALL 344
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K G F EA++++ M + G EP+ +TY+ +I LCK G +DA +LD M E G
Sbjct: 345 NNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVR 404
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ + LI C +++D A+ ++M+E +A +I G + ++GA +L
Sbjct: 405 MTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVEL 464
Query: 501 LVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+M EK W TF LI A++++EA L M + N P F I +
Sbjct: 465 HRKMAEKG--VAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGY 522
Query: 560 GTVED 564
V D
Sbjct: 523 CLVGD 527
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 41/271 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N YN +L + ++ + +V EM +G E + TY + K MM+DA+ +
Sbjct: 336 NIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCML 395
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M + + +V Y SL N K
Sbjct: 396 DRMREKGVRMTVY-------------------------PYNSLINCCCKK---------- 420
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
D A + M G P+ +YS VI GLC+ G A + +M E G +
Sbjct: 421 --DDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTY 478
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G C A ++D A F KM E N + + + +I G+ + A++L +M
Sbjct: 479 TFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQM 538
Query: 505 IEKVRLRPWQATFKTLIEKLL---GARRLEE 532
+ + L P T+++LI L GA + +E
Sbjct: 539 MCR-GLTPDNYTYRSLISGLCLTDGASKAKE 568
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 94/219 (42%), Gaps = 9/219 (4%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L + VY RA ++ D A+ ++ M++ G + + Y+ +I+GLCK R +A
Sbjct: 192 GVLLDEYVYTAGIRAYCEVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREA 251
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+V + M G D T L+ G C E+D AL M + +++G
Sbjct: 252 VDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDG 311
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ RV A++L ++ E +R+ P + L+ + EA L+ M + P
Sbjct: 312 LRKKGRVEEAFRLACQLGE-LRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEP 370
Query: 548 FPEPF---VQYISKFGTVEDASEFL-----KALSVKEYP 578
+ + + K G ++DA L K + + YP
Sbjct: 371 NEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYP 409
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 99/226 (43%), Gaps = 4/226 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K+ FR + E G + + + + ++ + ++ ++ N +EM +G+ + TY +
Sbjct: 635 KSCVLFREMKE-KGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTAL 693
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + A L + M+ + P+ + L ++ N + A L
Sbjct: 694 VNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFL 753
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N +S + + + K+G+ EA ++ GF PD I+YS VI LCK G +A
Sbjct: 754 ANIVS---VNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGDINEA 810
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ +EM G PDI + ILI+ E D+ L + M++K
Sbjct: 811 IELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKG 856
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 99/482 (20%), Positives = 192/482 (39%), Gaps = 39/482 (8%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K P+ Y++++ +L + + L RM+E + Y S++ K D
Sbjct: 366 KGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINC---CCKKDD 422
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLG----SDWDDKI--GKKLEDMKIELSDNFVL 236
L F MV EI + A + V+ G D + +K+ + + + +
Sbjct: 423 LDMAMGFLSEMV-EIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW-NTYTF 480
Query: 237 TVLKELRIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
T L K A F + E S + N +T+N ++ +R + + ++M
Sbjct: 481 TALINGFCKAKKMDEASRLFNKMTE-SNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM 539
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR-SISSI--- 349
G D TY + + + A K EF+ D +CS+L + S++++
Sbjct: 540 CRGLTPDNYTYRSL---ISGLCLTDGASKAKEFVAD-----LENNCSVLNKFSLTALLHG 591
Query: 350 --NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L + V N+ G L + I A K +++ + + MK G PD
Sbjct: 592 FCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPD 651
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
N+ ++ +I K G A N DEM +G +P+ T+T L+ C + + A L
Sbjct: 652 NVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCK 711
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M+ ++ ++ + ++ F ++ + A L M++ + TLI+
Sbjct: 712 EMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFAMLQGFLAN--IVSVNTLIKGFCKV 769
Query: 528 RRLEEAMNLLRLMKKQNYPPFPE-----PFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
+++EA++L+ + + FP+ + + K G + +A E + K P
Sbjct: 770 GQIQEAIDLISRSTENGF--FPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIV 827
Query: 582 AY 583
AY
Sbjct: 828 AY 829
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/128 (21%), Positives = 61/128 (47%), Gaps = 1/128 (0%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G + A+ + AM GF + ++ + +I G CK G+ ++A +++ ENG PD ++
Sbjct: 736 GNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISY 794
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ +I C +++ A+ + +M+ K D ++LI + + ++M++
Sbjct: 795 STVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVK 854
Query: 507 KVRLRPWQ 514
K W
Sbjct: 855 KGVQPNWH 862
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 127/555 (22%), Positives = 252/555 (45%), Gaps = 59/555 (10%)
Query: 67 NSSLELILACD---WSDELENKLEELSPK---LTHESVVYVLRKLDNDPEK--ASAFFNW 118
++S+ +AC+ + ++ N+++ L K LT +++ L + + P + A F+
Sbjct: 143 DTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSD 202
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK 178
V K + ++ +++++ ++ L + + +MK+ C+ + +Y +IL VL K
Sbjct: 203 VI-KLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKG 261
Query: 179 K---ASDLAALNQFHDGMVKEIAMDNV-------------AKTLVDV-----VLGSDW-- 215
K A DL L+ ++G++ N+ A ++D+ VL W
Sbjct: 262 KLNEARDLL-LDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTY 320
Query: 216 DDKIGKKLEDMKIE----LSDNFV-LTVLKELRIYPVKALGFFRWVG-----------EH 259
+ IG +D KI+ L D L +L ++ Y G F E
Sbjct: 321 NMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEG 380
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K N +TYN +++ + + + N + +M++ G+ D T+ + + K + +
Sbjct: 381 KGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSE 440
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A + MMD + ++ S+ L +I + L +++ + G + + Y
Sbjct: 441 AFR----MMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYG 496
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA K+ MK P ITY+ +I GLC +G+ + + + L+E+ E+
Sbjct: 497 TLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLES 556
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD T+ +I G+C +V++A KM++K++ D ++L+ G ++ ++ A
Sbjct: 557 GLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKA 616
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
KL I K + T+ T+I L R EEA +LL M+++ P + +S
Sbjct: 617 LKLFNTWISKGKAID-AVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILS 675
Query: 558 KF---GTVEDASEFL 569
G +++A EF+
Sbjct: 676 ALADAGRMKEAEEFM 690
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 131/285 (45%), Gaps = 6/285 (2%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSI-NNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A ++F M KP++ C+ L+ ++ + P + L + + LG ++ + ++
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + EA ++ MK+ PDN++Y+ ++ LCK G+ +A ++L +M+ NG
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+P+ T+ IL+ G+C + A M + N D ++LI G +++ A+
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+L EM E ++L P T+ TLI + L+ M+ + P + V++
Sbjct: 338 RLKDEM-ENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKW 396
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
K G +++A L+ + + P + + + GR EA
Sbjct: 397 YVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEA 441
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 5/232 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ I L K G+ +EA ++ MKN G P+ T++ ++ G CK G ++A V+D M
Sbjct: 250 YNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMA 309
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+N +PD+ T+ +LI G C ++D A +M D + LING
Sbjct: 310 QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSL 369
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
++L+ +M E ++P T+ +++ + +++ A N LR M++ + P F
Sbjct: 370 KGFELIDKM-EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTL 428
Query: 556 IS---KFGTVEDASEFLKALSVKEYPSSAAYLQ-VFESFFNEGRHYEAKDLL 603
I+ K G + +A + +S K ++ L + + E + +A LL
Sbjct: 429 INGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLL 480
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 169/410 (41%), Gaps = 44/410 (10%)
Query: 253 FRWVGEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
V E SG Y YNGI+ L R V D + V+E+M +E ++ TY +
Sbjct: 74 LELVRELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGL 133
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ + A ++F+ M KP+ L++ +S D L RV + SL
Sbjct: 134 CRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEAL--RVMIEQRSLELPT 191
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG-------------- 417
I L K R D+A K M+ M+ G P+ +TYS ++ G
Sbjct: 192 DVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFF 251
Query: 418 ----------------------LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
LCKAG + A ++E+ ++G +PD+ T+++LI
Sbjct: 252 EEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFAR 311
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A + D +L M D LIN +++ A++LL E++E P
Sbjct: 312 AGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL-ELMEAAGSPPNVV 370
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL 572
T+ ++++ L + +++E + +M K P + + +SK G ++ A + + +
Sbjct: 371 TYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELI 430
Query: 573 -SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKISLLFG 621
S +E P +AAY V S G+ EA + + + D+ L G
Sbjct: 431 KSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAG 480
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 102/242 (42%), Gaps = 13/242 (5%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
SG + +TY+ ++ AR ++E+M++ G + D+ TY + K R +
Sbjct: 292 QSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQ 351
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---V 375
DA +L E M P+V + ++ + D V YE + S
Sbjct: 352 DAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMD-----EVHRVYEMMLKSRCSPDVVT 406
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L+K G D A K+ + +K++ PD YS VI LC+AG+ E+AC + ME
Sbjct: 407 YSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGME 466
Query: 436 ENGCIPDI-KTWTILIQGHCAANEVDRALLCFAKMMEKNY----DADADLLDVLINGFLS 490
+I + L+ C A D A E+ + D DL+ ++ + L
Sbjct: 467 VTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRMTKSGDTDLVKIVEDHLLE 526
Query: 491 QK 492
K
Sbjct: 527 SK 528
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 6/192 (3%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + K V DG+ A G ++A ++++ + + P Y+ +I GLC+A R DA
Sbjct: 53 GETTYKLVVDGLCGA----GMANQALELVRELSGV-YTPTLFIYNGIITGLCRASRVMDA 107
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL++M E +P++ T+TIL+ G C +N+ A F +M + LI
Sbjct: 108 YKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQH 167
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ A ++++E + L T T++ L A RL++A+ + M++ P
Sbjct: 168 LSRAGEIDEALRVMIEQ-RSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRP 226
Query: 548 FPEPFVQYISKF 559
+ + F
Sbjct: 227 NEVTYSNLVHGF 238
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 91/215 (42%), Gaps = 14/215 (6%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC-IPDIKTW 446
+F E ++ + + G TY V+ GLC AG A ++ E+ +G P + +
Sbjct: 34 KFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVREL--SGVYTPTLFIY 91
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+I G C A+ V A KM+E++ + +L+NG + A ++ EM +
Sbjct: 92 NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEM-K 150
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
+ +P T+ TLI+ L A ++EA LR+M +Q P + + G + AS
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEA---LRVMIEQRSLELPTDVITCTTIVGGLCKAS 207
Query: 567 EFLKALSVKE-------YPSSAAYLQVFESFFNEG 594
AL E P+ Y + F G
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 40/183 (21%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N +TYN ++ L + + + V E M K D+ TY I K M+
Sbjct: 361 EAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGML 420
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ AVKLFE + SS PD + Y
Sbjct: 421 DSAVKLFELIK------------------SSREGPD-------------------AAAYS 443
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI--TYSQVIFGLCKAGRFEDACNVLDEME 435
+ +L + G+ +EA M M+ DNI + ++ LC A R + A +++
Sbjct: 444 MVITSLCRAGKLEEACGMYHGME-VTVAGDNICRALAGLVAALCDAERTDSARRIVEVAS 502
Query: 436 ENG 438
E G
Sbjct: 503 ERG 505
>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g06710, mitochondrial; Flags: Precursor
gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
Length = 987
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 28/346 (8%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+W E G N +TY ++ + + V + E M EG +I TY +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K +E A ++FE R S + PD+ + F+ +Y+
Sbjct: 599 CKAGQVEKACQIFE------------------RMCGSKDVPDVDMYFK---QYDDNSERP 637
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y + K R +EA K++ AM G EP+ I Y +I GLCK G+ ++A V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM E+G + T++ LI + D A +KM+E + + + +I+G
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ + AYKL+ +M+E+ +P T+ +I+ ++E + LL M + P
Sbjct: 758 GKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNE 593
+ + + K G ++ A L+ + +P+ +A Y +V E F E
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 133/584 (22%), Positives = 246/584 (42%), Gaps = 77/584 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L + KL+ V+ VLR L P +FF W + ++ ++ VY+ ++ +V D
Sbjct: 123 LRQFREKLSESLVIEVLR-LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 181
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K L+++++D ++E + L VL K + S AL + G +K+
Sbjct: 182 KVPEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEEL--GRLKDFRFRPSR 235
Query: 204 KT---LVDVVLGSDWDD-----------------------------KIGKKLEDMKIELS 231
T L+ L +D D K+GK E + + +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 232 DNFV---------LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+NFV ++ L E ++ +A+ F + S N +TY+ +L + +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQL 353
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+ M EG + + + A KL + M+ + P ++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 343 LRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ SI S+N L L + ++ + G L+K R L G++++A +++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GF PD TYS+V+ LC A + E A + +EM+ G + D+ T+TI++ C A
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A F +M E + LI+ +L K+V+ A +L M+ + L P T+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYS 592
Query: 519 TLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY--------ISKFGT-------- 561
LI+ A ++E+A + R+ ++ P F QY + +G
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 562 --VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
VE+A + L A+S++ P+ Y + + G+ EA+++
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TY ++ + ++E M +G + TY + K +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M + ++ + LGL+ + + SVY
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD----DTAPFLSVYR 886
Query: 378 GIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ L K R + A ++++ A +A + TY+ +I LC A + E A + EM
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ G IP+++++ LI+G +++ ALL
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + +++ M+++G + ++ TY + F +E ++L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
E M P+ +L+ D+ L+ + + + + V +G ++
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Query: 383 LTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGCI 440
+ LG DE + A P Y +I L KA R E A +L+E+ + +
Sbjct: 863 FIESLGLLDEIGQDDTA-------PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 441 PDIK-TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D T+ LI+ C AN+V+ A F++M +K + LI G +++ A
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 500 LL 501
LL
Sbjct: 976 LL 977
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 125/550 (22%), Positives = 217/550 (39%), Gaps = 91/550 (16%)
Query: 16 SLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILA 75
++L + R + +R F S H + +I+T + FS+ P +S + +L
Sbjct: 163 AVLRGGGGAARAILSRAVRF-------PSPHRHFVEHYISTYKT--FSSDP-ASFDFLLL 212
Query: 76 CDWSDELENKLEELSPKLTHESVVYVLRKLDND---------PEKASAFFN----WVCDK 122
C S L +L + + E+ VL +L D P K +N +CD
Sbjct: 213 CLPSAPLLRRLRQYGISPSPEACNAVLSRLPLDEAIELFQELPHKNVCSYNILLKALCDA 272
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ + + R L ++ + VT + HC LG L+ A K
Sbjct: 273 GRVKDA--------RQLFDEMASAPDVVTYGILIHGHC---------ALGELENAVKL-- 313
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM---KIELSDNFVLTVL 239
L++ G V+ A V ++V ++ W + +EDM K+ L + TVL
Sbjct: 314 ---LDEMVAGGVEPNA--TVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVL 368
Query: 240 KELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ RW E G + +TY ++ L R + + +++EM
Sbjct: 369 SGF-CNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRL 427
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
++D TY + + K M +A ++ M+ P+V
Sbjct: 428 DVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNV--------------------- 466
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
Y + L K G A +++ M N G E + TY+ +I G
Sbjct: 467 ----------------VTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLING 510
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCKAG E A + +M+ PD+ T+T LI C + ++DRA +M++K
Sbjct: 511 LCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPT 570
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+VL+NGF RV G KLL M+EK + P AT+ +L+++ ++ +
Sbjct: 571 IVTYNVLMNGFCMSGRVEGGKKLLDWMLEK-NIHPNAATYNSLMKQYCIENNMKSTTEIY 629
Query: 538 RLMKKQNYPP 547
+ M+ ++ P
Sbjct: 630 KGMRSRDVGP 639
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 154/366 (42%), Gaps = 41/366 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +YN +L+ L V+D + +EM D+ TY + +E+AVKL
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEMASAP---DVVTYGILIHGHCALGELENAVKLL 314
Query: 325 EFMMDGPYKPS--------------------------------VQDCSLLLRSISS-INN 351
+ M+ G +P+ + D +L +S N
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
DL R ++ + G + Y + L + +EAEK+++ M + D +TY
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I G CK G+ +A + + M + G P++ T+T L G C +V A +M
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + +A + LING + A + + +M + L+P T+ TLI+ L + L+
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADM-DTACLKPDVYTYTTLIDALCKSGDLD 553
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVF 587
A +LL+ M + P + ++ F G VE + L + K +P++A Y +
Sbjct: 554 RAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLM 613
Query: 588 ESFFNE 593
+ + E
Sbjct: 614 KQYCIE 619
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 117/262 (44%), Gaps = 13/262 (4%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+++A++LF+ + P+K +V ++LL+++ D G V ++ + ++ Y
Sbjct: 244 LDEAIELFQEL---PHK-NVCSYNILLKALC-----DAGRVKDARQLFDEMASAPDVVTY 294
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ LG + A K++ M G EP+ Y+ V+ LC G DA V+++M +
Sbjct: 295 GILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQ 354
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
I D +T ++ G C ++ A F +M K D +ING +
Sbjct: 355 RKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEE 414
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY- 555
A KLL EM + RL + T+ LI+ ++ EA + M ++ P +
Sbjct: 415 AEKLLQEMWAR-RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALT 473
Query: 556 --ISKFGTVEDASEFLKALSVK 575
+ K G V+ A+E L +S K
Sbjct: 474 DGLCKQGDVQAANELLHEMSNK 495
>gi|449445529|ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 158/381 (41%), Gaps = 62/381 (16%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L+ + +S +L +L + P L FF+W + H+ TY+ I +L R
Sbjct: 45 RTLQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSG 104
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD-- 338
+ + +++ MK++G +D T+ + F + + A+++ + M D +
Sbjct: 105 YLHEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMEDLGTSLELNTYN 164
Query: 339 ---------------CSLLLRSISSINNPDLGLVFRVANKYESLGNSLS----------- 372
S+ + + NN G V A + L NSL+
Sbjct: 165 SVLVALLRKNQVGLALSIFFKLLDGFNNG--GQVDSAATTFHFLPNSLACNELLVALRKL 222
Query: 373 ------KSVYDGIHRALTKL-----------------GRFDEAEKMMKAMK-----NAGF 404
K V+D + RA+ G D A + K MK + F
Sbjct: 223 DMRVEFKKVFDKL-RAIESFEFSVYGYNICIYAFGCWGYLDTALSLFKEMKEKSLVSESF 281
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD TY+ +I LC G+ +DA V +E++ +G PD T+ I+IQG C + +D A +
Sbjct: 282 SPDLCTYNSIIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATM 341
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEK 523
F +M D + + L+NG ++V A +L +M+ E VR PW T+ LI+
Sbjct: 342 IFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPW--TYNILIDG 399
Query: 524 LLGARRLEEAMNLLRLMKKQN 544
L R E L +KK+
Sbjct: 400 LFRNGRAEAGYTLFCDLKKKG 420
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 193/467 (41%), Gaps = 64/467 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L+ S ++H ++ +L +P FF W F S + YS + L L
Sbjct: 47 LQHHSLPISHPLLLQILHSRSLNPSHKLDFFKWCSLAPNFNHSPSTYSQIFHILCRSGYL 106
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ L MK D ++ T+ +L ++ K + L L+ D + + ++
Sbjct: 107 HEVPPLLDSMKRDGVSVDSHTFKVLLDAFIRSGKYDAALEILDHMED-LGTSLELNTYNS 165
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNF-----VLTVLKELRIYPVKALGFFRWVGEH 259
LV ++ +++G L + +L D F V + P
Sbjct: 166 VLVALLR----KNQVGLALS-IFFKLLDGFNNGGQVDSAATTFHFLP------------- 207
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMME 318
N++ N +L L + + +F V ++++ E +E + Y F + ++
Sbjct: 208 -----NSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICIYAFGCWGYLD 262
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ LF+ M ++ SL+ S S PDL Y+
Sbjct: 263 TALSLFKEM---------KEKSLVSESFS----PDL-------------------CTYNS 290
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L +G+ +A + + +K +G EPD TY +I G CK+ R +DA + +EME NG
Sbjct: 291 IIHVLCLVGKVKDALIVWEELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNG 350
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IPD + L+ G A +V A F KM++++ A ++LI+G R Y
Sbjct: 351 LIPDTIVYNSLLNGLFKARKVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGY 410
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
L ++ +K ++ T+ +I +L R LEEA+ L+ M+ + +
Sbjct: 411 TLFCDLKKKGQIVD-AVTYSIIILQLCKERLLEEALQLVEEMEARGF 456
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ + A K+ + + G P TY+ ++ K G F A + +EM EN C DI T+
Sbjct: 612 GKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATY 671
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
++IQG D A K+ME+ D + + LIN R++ KL +M
Sbjct: 672 NVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQM-R 730
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ P TF TLIE A RL++A L++M P
Sbjct: 731 NSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSP 771
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 2/147 (1%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY + F K A +F M + + +++++ + + DL V
Sbjct: 635 TYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLA--SSVLE 692
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K G L +Y+ + AL K GR D+ K+ M+N+G PD +T++ +I KAG
Sbjct: 693 KLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEVHSKAG 752
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTIL 449
R +DA L M ++GC P+ T T L
Sbjct: 753 RLKDAYKFLKMMLDSGCSPNHVTDTTL 779
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 77/180 (42%), Gaps = 4/180 (2%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L ++ + +G + K Y+ + + K G F +A + M D TY+
Sbjct: 614 LNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNV 673
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GL K GR + A +VL+++ E G DI + LI A +D F +M
Sbjct: 674 IIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSG 733
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ D + LI R+ AYK L M++ P T TL LG R +E+A
Sbjct: 734 INPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDS-GCSPNHVTDTTL--DFLG-REMEKA 789
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 157/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD +K + + DT K+
Sbjct: 48 ASAVFAAILETKGAQRSDIYVFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ ++ L V +
Sbjct: 108 LEHLMKLKYFKLVWGFYKEILECGYPTSLYFFNILMHRFC--KEGEIRLAQSVFDAITKC 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG D+ ++ AM +G PD T + +I GLCK + ++A
Sbjct: 166 GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM + G +P+ T+T LI GHC + VD AL + +M+ + Y D + LI G
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+VEM K L+P + T+ TLI+ LE A L + M +++
Sbjct: 286 LCRKGDLKQARDLIVEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G A LL
Sbjct: 345 DDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLL 404
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + M G D+ T + K M++A
Sbjct: 166 GLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF M+D P+ + L+ DL L + + G S Y+ +
Sbjct: 226 NELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLAL--EIYKQMLRQGYSPDLITYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + G +A ++ M G +PD ITY+ +I G CK G E A + M E
Sbjct: 284 YGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIR 343
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ + ++INGF Q V A KL
Sbjct: 344 LDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKL 403
Query: 501 LVEM 504
L EM
Sbjct: 404 LKEM 407
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 37/185 (20%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + ITYN ++ L R ++ +++ EM +G + D TY
Sbjct: 271 GYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTT-------------- 316
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++DG S DL F + + L Y +
Sbjct: 317 ------LIDG-----------------SCKEGDLETAFELRKRMIEESIRLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKM++ M + G +P+N TY+ +I G CK G + A +L EM+ +G +
Sbjct: 354 SGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHV 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PCVVT 418
>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 997
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 28/346 (8%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+W E G N +TY ++ + + V + E M EG +I TY +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K +E A ++FE R S + PD+ + F+ +Y+
Sbjct: 599 CKAGQVEKACQIFE------------------RMCGSKDVPDVDMYFK---QYDDNSERP 637
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y + K R +EA K++ AM G EP+ I Y +I GLCK G+ ++A V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM E+G + T++ LI + D A +KM+E + + + +I+G
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ + AYKL+ +M+E+ +P T+ +I+ ++E + LL M + P
Sbjct: 758 GKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNE 593
+ + + K G ++ A L+ + +P+ +A Y +V E F E
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 134/591 (22%), Positives = 248/591 (41%), Gaps = 77/591 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L + KL+ V+ VLR L P +FF W + ++ ++ VY+ ++ +V D
Sbjct: 123 LRQFREKLSESLVIEVLR-LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 181
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K L+++++D ++E + L VL K + S AL + G +K+
Sbjct: 182 KVPEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEEL--GRLKDFRFRPSR 235
Query: 204 KT---LVDVVLGSDWDD-----------------------------KIGKKLEDMKIELS 231
T L+ L +D D K+GK E + + +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 232 DNFV---------LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+NFV ++ L E ++ +A+ F + S N +TY+ +L + +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQL 353
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+ M EG + + + A KL + M+ + P ++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 343 LRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ SI S+N L L + ++ + G L+K R L G++++A +++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GF PD TYS+V+ LC A + E A + +EM+ G + D+ T+TI++ C A
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A F +M E + LI+ +L K+V+ A +L M+ + L P T+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYS 592
Query: 519 TLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY--------ISKFGT-------- 561
LI+ A ++E+A + R+ ++ P F QY + +G
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 562 --VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
VE+A + L A+S++ P+ Y + + G+ EA+++ + H
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 703
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TY ++ + ++E M +G + TY + K +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M + ++ + LGL+ + + SVY
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD----DTAPFLSVYR 886
Query: 378 GIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ L K R + A ++++ A +A + TY+ +I LC A + E A + EM
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ G IP+++++ LI+G +++ ALL
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + +++ M+++G + ++ TY + F +E ++L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
E M P+ +L+ D+ L+ + + + + V +G ++
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Query: 383 LTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGCI 440
+ LG DE + A P Y +I L KA R E A +L+E+ + +
Sbjct: 863 FIESLGLLDEIGQDDTA-------PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 441 PDIK-TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D T+ LI+ C AN+V+ A F++M +K + LI G +++ A
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 500 LL 501
LL
Sbjct: 976 LL 977
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 162/382 (42%), Gaps = 44/382 (11%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK E+R P A FF W + Y HN Y ++ VLA + V
Sbjct: 94 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 153
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V E+KK + M + + + F K M+E+ + ++ M + +P++
Sbjct: 154 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY-------- 205
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
Y L N L +++ D AE++ + M++ +
Sbjct: 206 -----------------TYNFLMNGLVSAMF------------VDSAERVFEVMESGRIK 236
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G CKAG+ + A L +ME G D T+ +IQ A ++ +
Sbjct: 237 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 296
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ +M EK ++I G + ++N Y + MI K +P A + LI+
Sbjct: 297 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYA 355
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSA 581
+ +E+A+ LL M + + P + V + K G VE+A ++ +S
Sbjct: 356 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 415
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + + GR EA+ L
Sbjct: 416 FYSSLIDGLGKAGRVDEAERLF 437
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 5/350 (1%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V E K + +TYN +++ + + + +M+ G+E D TY+ + +
Sbjct: 229 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 288
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
V L++ M + + SL++ + + G + V G+ + ++
Sbjct: 289 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG--YTVFENMIRKGSKPNVAI 346
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + K G ++A +++ M + GF+PD +TYS V+ GLCK GR E+A +
Sbjct: 347 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 406
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+G + ++ LI G A VD A F +M EK D+ + LI+ F ++V+
Sbjct: 407 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 466
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L M E+ T+ L+ + R EEA+ L +M + P F
Sbjct: 467 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 526
Query: 556 ISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G V A + L L+ AA + + GR EA L
Sbjct: 527 STGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKL 576
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 42/279 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL +F G N++ Y+ ++ L + V + + EEM ++G D Y +
Sbjct: 397 EALDYFH-TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 455
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K R +++A+ LF+ M E
Sbjct: 456 IDAFTKHRKVDEAIALFKRM------------------------------------EEEE 479
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y + + K R +EA K+ M + G P + + GLC +G+ A
Sbjct: 480 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 539
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
C +LDE+ G I D +I C A + A + E+ + + V+IN
Sbjct: 540 CKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINA 598
Query: 488 FLSQKRVNGAYKLLVEMI----EKVRLRPWQATFKTLIE 522
+ + A KL+ I E++ + F TL+E
Sbjct: 599 LRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 637
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T ++ R V D ++V++M + GY+ DI Y I K + + DA
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
F+ + +P+V + L+ + + + R ++ L + + K +
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSS--------RWSDAARLLSDMIKKKITPNVI 261
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + A K G+ EA+++ + M +PD +TYS ++ GLC R ++A + D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLM 321
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC+ D+ ++ LI G C A V+ + F +M ++ ++ + LI GF V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A + +M + + P T+ L+ L LE+A+ + M+K+ +
Sbjct: 382 DKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 555 YI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I K G VE+A +LS+K P Y + +G +E + L K
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ LF M+ PS+ D + LL +I + D +V + K E LG +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRNDLYTF 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + A ++ M G+EPD +T ++ G C+ R DA +++D+M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PDI + +I C V+ A F ++ K + L+NG + R +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +LL +MI+K ++ P T+ L++ + ++ EA L M + + P
Sbjct: 244 AARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ KL ++D + K M+ G D T++ VI C + A ++L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD T L+ G C N V A+ KM+E Y D + +I+ KRVN
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A+ E IE+ +RP T+ L+ L + R +A LL M K+ P +
Sbjct: 208 DAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 556 ISKF---GTVEDASEFLKAL 572
+ F G V +A E + +
Sbjct: 267 LDAFVKNGKVLEAKELFEEM 286
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ITY+ +L ++ V + + EEM + + DI TY + +++A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMF 318
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ V + L+ + G+ +FR ++ + N+++ Y+ + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT---YNTLIQGF 375
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D+A++ M G PD TY+ ++ GLC G E A + ++M++ DI
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T +I+G C +V+ A F + K D +++G ++ ++ L +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 504 M 504
M
Sbjct: 496 M 496
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K +++ ++ +ME G D+ T+ I+I C +V AL
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM++ Y+ D + L+NGF + RV+ A L+ +M+E + +P + +I+ L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLC 201
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEY-PSSA 581
+R+ +A + + ++++ P + ++ DA+ L + K+ P+
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + ++F G+ EAK+L
Sbjct: 262 TYSALLDAFVKNGKVLEAKEL 282
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ ++ L H+ + + + + M +G D+ +Y + F K + +ED +KLF
Sbjct: 294 DIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + + L++ + D F ++ + G S Y+ + L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF--FSQMDFFGISPDIWTYNILLGGLC 411
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + M+ + D +TY+ VI G+CK G+ E+A ++ + G PDI
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNY--------DADADLLDVLINGFLS 490
T+T ++ G C + + KM ++ D D L LI LS
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS 525
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 138/307 (44%), Gaps = 16/307 (5%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+++L FF W G+ + YN +L + + W+V++ MK G E+ + T+
Sbjct: 159 LQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKSRGVEITVHTFSA 218
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R++ + + +AV F M D P + S+++ S+ R AN+ +S
Sbjct: 219 LVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKK---------RRANEAQS 269
Query: 367 LGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+SL VY + + G +AE++ MK AG +P+ TYS VI LC+
Sbjct: 270 FFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCR 329
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G+ A +V EM + GC P+ T+ L++ H A ++ L + +M AD
Sbjct: 330 CGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTIS 389
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ +I + + A K+L M++K + P +TF + + + A + M
Sbjct: 390 YNFIIESHCRDENLEEAAKILNLMVKK-GVAPNASTFNFIFGCIAKLHDVNGAHRMYARM 448
Query: 541 KKQNYPP 547
K+ N P
Sbjct: 449 KELNCQP 455
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 181/436 (41%), Gaps = 43/436 (9%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF---WVTLRRMKEDHCYIEEETYLSI 170
AFFNW F S Y+ ML +L K L+QF W + MK I T+ ++
Sbjct: 163 AFFNWSSSLDGFPASPEPYNEML-DLAGK--LRQFDLAWHVIDLMKSRGVEITVHTFSAL 219
Query: 171 LGVLKKAKKASD-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+ +A A++ + A N+ D D VA ++V
Sbjct: 220 VRRYVRAGLAAEAVHAFNRMEDYGCTP---DMVAFSIV---------------------- 254
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ ++ K+ R +A FF + ++ + + Y ++ R + V
Sbjct: 255 -----ISSLCKKRRAN--EAQSFFDSLKHR--FEPDVVVYTSLVHGWCRAGDISKAEEVF 305
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+MK G + ++ TY + + + A +F M+D P+ + L+R +
Sbjct: 306 SDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRV--HV 363
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
V +V N+ + LG Y+ I + + +EA K++ M G P+
Sbjct: 364 KAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNAS 423
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T++ + + K A + M+E C P+ T+ IL++ + D L +M
Sbjct: 424 TFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEM 483
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
E + + + +LI+ F K N AYKL++EM+E+ LRP + ++T++E L A +
Sbjct: 484 DESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQ 543
Query: 530 LEEAMNLLRLMKKQNY 545
L++ L+ M + +
Sbjct: 544 LKKHEELVDKMVARGF 559
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 7/292 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + + YN ++ L ++ V++ V M G D TY + F + +
Sbjct: 225 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 284
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVY 376
E A+++ M+ + PS +CS + I + +L F +A K LG + Y
Sbjct: 285 EMALRITHDMIRLGFVPSEANCSFM---IDELRKKELVEEAFSLACKLGDLGMVPNVFAY 341
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K RFD+A+++ K M G EP+ +TY+ +I LCK G EDA + D+M +
Sbjct: 342 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 401
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + LI G+C +DRA + M+++ A LI G ++
Sbjct: 402 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 461
Query: 497 AYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L EM E R W TF LI ++++EA L M N P
Sbjct: 462 CMELHREMAE--RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 511
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L ++E D + +EM G E + TY + K M+EDA
Sbjct: 333 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 392
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M D K +V Y SL N K
Sbjct: 393 LCLFDKMRDKGIKVTVY-------------------------PYNSLINGYCKQ------ 421
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G D A ++ M G P +YS +I GLC+ G + EM E G
Sbjct: 422 ------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 475
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+T LI G C ++D A F KM++ N + +V+I G+ + A++L
Sbjct: 476 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 535
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL 524
+M+E + L+P T+++LI L
Sbjct: 536 YDQMVE-MGLKPDNYTYRSLISGL 558
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 4/241 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K+ FR + E G K + I Y ++ L++ E++ N ++M +GY + T+ +
Sbjct: 636 KSCVLFREMKEQ-GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVL 694
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + A L + M+ G P+ + L ++ + + A L
Sbjct: 695 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL 754
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ +S ++ + + L K G+ EA +M + +GF PD I+YS +I LCK G A
Sbjct: 755 ASIVS---FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 811
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM G PD+ + I I+ E D+AL + M+ + D L++G
Sbjct: 812 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 871
Query: 488 F 488
Sbjct: 872 I 872
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 13/244 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L + VY RA + D A ++ M++ G + + Y+ +++GLCK R ++A
Sbjct: 193 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 252
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V + M G D T+ L+ G C E++ AL M+ + +I+
Sbjct: 253 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 312
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ V A+ L ++ + + + P + LI+KL R ++A L + M + P
Sbjct: 313 LRKKELVEEAFSLACKLGD-LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP 371
Query: 548 FPEPF---VQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + + K G +EDA K + V YP Y + + +G A
Sbjct: 372 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRA 427
Query: 600 KDLL 603
+ LL
Sbjct: 428 RGLL 431
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +Y+ ++ L R+ + + EM + G + T+ + F K + M++A
Sbjct: 438 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 497
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------PDLGL------------- 356
+LF+ M+D P+ ++++ + N ++GL
Sbjct: 498 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 557
Query: 357 -------------VFRVANKYESLGN-SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
V + N Y L N SL+ +Y G R GRF E + M
Sbjct: 558 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLY-GFFRE----GRFTETYHLWDEMAVR 612
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + D ++++ +++ K E +C + EM+E G PD +T +I + +A
Sbjct: 613 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 672
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L C+ +M+ Y + VLIN + A L EM+ L P + T+ ++
Sbjct: 673 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL-PNKFTYNCFLD 731
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKEY-PS 579
+E+A +L M + + ++ + K G +++A + + ++ + P
Sbjct: 732 YFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 791
Query: 580 SAAYLQVFESFFNEGRHYEA----KDLLYK 605
+Y + G +A ++LYK
Sbjct: 792 CISYSTIIHELCKMGDINKAFELWNEMLYK 821
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT LR Y + + +F E G H+ ++ ++ R + +V+ +M K
Sbjct: 77 LLTATANLRRY--ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK 134
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
GYE I T+ + F + DA L M+ Y+P+V + L+ + N +L
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC--KNGEL 192
Query: 355 GLVFRVANKYESLG--------NSL-------------SKSVYDGIHRAL---------- 383
+ + N+ E G N+L ++ + D + R++
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 384 ----TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G DEA+++ K M + +P+N+TY+ +I GLC GR DA D M GC
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ LI G C VD + F +M + ++AD + LI+G+ ++ A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK-QNYPPFP--EPFVQYI 556
+ M+ + R+ P T L+ L +E A+ M++ + Y + +
Sbjct: 373 IFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K VE A E L V+ P + Y + G EA +L+ +
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA LF M+ PS+ D + LL + +++ + + F + K E G S +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYF--SQKMELYGISHDLYSFT 110
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + R A ++ M G+EP +T+ ++ G C R DA +++ M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ + LI G C E++ AL +M +K AD + L+ G R + A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++L +M+++ + P TF LI+ + L+EA L + M + + P + I+
Sbjct: 231 ARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 558 KF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
G + DA + ++ K +P+ Y + F
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 147/389 (37%), Gaps = 75/389 (19%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + P+ VY+ ++ L L L M++ + TY ++L L + + S
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 182 DLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
D A + D M + I D V T L+DV + D+ + ++M
Sbjct: 229 DAARM--LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI------------- 273
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
S N +TYN I+ L H + D + M +G +
Sbjct: 274 ------------------QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ TY + F KFRM+++ +KLF+ M + N D+
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF------------------NADI------ 351
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
Y+ + ++G+ A + M + PD IT+ ++ GLC
Sbjct: 352 -------------FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G E A D+M E+ I + I+I G C A++V++A F ++ + DA
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
++I G NG + E+I +++
Sbjct: 459 YTIMILGLCK----NGPRREADELIRRMK 483
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
RF++A + M ++ P + +++++ R+E +ME G D+ ++T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
ILI C + + AL KMM+ Y+ L++GF R+ A+ L++ M+ K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-K 169
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P + TLI+ L L A+ LL M+K+ + ++ G D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
A+ L+ + + P + + + F +G EA++L
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 171/393 (43%), Gaps = 17/393 (4%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P A F+W G+ S + HN T N +L V + V D + K +E D +Y
Sbjct: 82 PNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYN 141
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ F K ++ A+ LF M D ++ +++LR + S + + + V ++
Sbjct: 142 TLMNGFFKAGDVKKALALFGEMKDSGIA-VLRSHNIVLRGLCS--GGKISMAWEV---FK 195
Query: 366 SLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ S ++ Y + L K + D+A + K M + PD +TY +I GL K R
Sbjct: 196 DMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRR 255
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM-EKNYDADADLLD 482
++A ++ +E GC P + T+ +I G C ++ AL + M+ E + D
Sbjct: 256 VKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYS 315
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LING R AY+L EM++ P T+ TL++ L + ++AM + R M
Sbjct: 316 ALINGLNLSNRGEKAYELYEEMLD-TGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGV 374
Query: 543 QNY-PPFPEPFVQYISKFGTVE---DASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHY 597
N P + I +F V+ DA + K + + P + + V + E R
Sbjct: 375 GNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRID 434
Query: 598 EAKDLLYKCPHHIRQDSKI--SLLFGSAKSNKV 628
EA +L + DS + ++L G K ++
Sbjct: 435 EAHELFESIGKTCKPDSVLFNTMLAGYCKITRI 467
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 97/455 (21%), Positives = 178/455 (39%), Gaps = 77/455 (16%)
Query: 108 DPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIE---- 163
DP A F W + +F N ++L +V RR+++ H + +
Sbjct: 81 DPNTAWEVFQWAGKQSKFT----------HNRFTCNNLLSVYVKARRVEDAHLFFQSHMK 130
Query: 164 ------EETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD 216
E +Y +++ G K LA + D + + N+ V+ G
Sbjct: 131 NVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNI------VLRGLCSG 184
Query: 217 DKIGKKLE---DMKIELSDNFV-LTVL-----KELRIYPVKALGFFRWVGEHSGYKHNTI 267
KI E DM S N + T++ K ++ KA+ F+ + + + Y + +
Sbjct: 185 GKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVD--KAITLFKQMVDKAIYP-DVV 241
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L + V++ +++ EE + +G + TY + K +E+A+ L++ M
Sbjct: 242 TYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDM 301
Query: 328 MDGPY-KPSVQDCSLLLRSISSINNP-----------DLGLVFRVANKYESLGNSLSKS- 374
+ P+ KP + S L+ ++ N D G V Y +L + L KS
Sbjct: 302 VREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT-YNTLLDGLCKSG 360
Query: 375 -----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
Y + K+ R +A K+ K M+ PD +T+
Sbjct: 361 CEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTF 420
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ VI LCK R ++A + + + + C PD + ++ G+C +D A +M++
Sbjct: 421 TTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLD 479
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
L+ GF R + A + EMIE
Sbjct: 480 SGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIE 514
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 157/363 (43%), Gaps = 40/363 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F P+ Y++M+ L + + ++M + Y + TY +++ L K ++ +
Sbjct: 201 FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKE-- 258
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
A + F + K V T++D + K G+ +E+ + L D+ V +E
Sbjct: 259 AYDLFEEARAKGCHPTVVTYNTMIDGLC------KCGR-IEN-ALTLYDDMV----REPH 306
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ P + TY+ ++ L + + EEM G D+ T
Sbjct: 307 LKP------------------DMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVT 348
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPY-KPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y + K + A+++F M G P+V ++L+ ++ LG ++A
Sbjct: 349 YNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDR--LGDAVKLAK 406
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ E + + + L K R DEA ++ +++ +PD++ ++ ++ G CK
Sbjct: 407 EMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKT-CKPDSVLFNTMLAGYCKIT 465
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD---AD 479
R +DA + D M ++GC P + T+T L+ G C AL+ + +M+E + + A+
Sbjct: 466 RIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAE 525
Query: 480 LLD 482
L+D
Sbjct: 526 LVD 528
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 143/346 (41%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + NT YN +L VLA ++ + EM +G E D+ T+ + + R A
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTA 215
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V + E M P + L+ + + R+ + +G S + + +
Sbjct: 216 VLMLEEMSSCDVAPDETTFTTLMEGF--VEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
KLGR +A ++ GFEPD +T+S + GLC+ G + A VL M + GC
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T++ +I C E++ A +M++ D + LI ++ ++ A L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
E+ K L P TF LI L A+ L MK P + + +
Sbjct: 394 ARELTVK-GLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLC 452
Query: 558 KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDL 602
G + A + LK + V P S+ Y + + R EA+++
Sbjct: 453 SSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEV 498
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 162/373 (43%), Gaps = 42/373 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +T++ + L ++ V V+ M +EG E D+ TY + +E+A
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEA 355
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M+D P + L+ ++ + N + L +A + G S + ++ +
Sbjct: 356 KGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEAL--DLARELTVKGLSPNVYTFNILI 413
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+G A ++ + MK++G PD +TY+ +I LC +G+ A ++L EME +GC
Sbjct: 414 NALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCP 473
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
T+ +I G C ++ A F +M +A + LI+G + +R++ A +L
Sbjct: 474 QSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAEL 533
Query: 501 LVEMIEKVRLRPWQATFK-----------------------------------TLIEKLL 525
+ +MI + L+P T+ TLI L
Sbjct: 534 VDQMISE-GLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDA-SEFLKALSVKEYPSSA 581
ARR + A+ LLR M+ + P P+ P +Q + + DA S F + V P +
Sbjct: 593 KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAF 652
Query: 582 AYLQVFESFFNEG 594
Y VF G
Sbjct: 653 TYKIVFRGLCRGG 665
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 37/279 (13%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y I+R L + +V EM++EG+E+ + + + ++ +DA L
Sbjct: 93 YEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDL----- 147
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
V+N+ + G + VY+ + L + +
Sbjct: 148 -------------------------------VSNQLDMFGVQANTEVYNHLLTVLAEGSK 176
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
E M + G EPD +T++ VI LC+A + A +L+EM PD T+T
Sbjct: 177 IKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTT 236
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L++G ++ AL A+M E + ++VLING+ RV A + + I
Sbjct: 237 LMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIAD- 295
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P + TF T + L ++ A+ +L LM ++ P
Sbjct: 296 GFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEP 334
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 131/335 (39%), Gaps = 49/335 (14%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + +TYN ++ L + ++++EM+ G TY I K R +E+
Sbjct: 435 SGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEE 494
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M D + + R+ + N ++ DG+
Sbjct: 495 AEEVFDQM----------DVTGIGRNAITFN-----------------------TLIDGL 521
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A R D+A +++ M + G +P+N+TY+ ++ CK G A ++L M NG
Sbjct: 522 CNA----ERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGF 577
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D+ T+ LI G C A AL M K + +I A
Sbjct: 578 EVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALS 637
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
L EM E V P T+K + L G ++EA + L M + P +
Sbjct: 638 LFREMTE-VGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIP----------E 686
Query: 559 FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
F + +E L L + +Y A L V ++ F E
Sbjct: 687 FSSFRMLAEGLLNLGMDDYLIRAIELIVEKANFRE 721
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 162/407 (39%), Gaps = 50/407 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P YS ++ L N L++ + +M + C + T+ +++ L + + AL
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEE--AL 391
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL-EDMKI------ELSDNFVLTVL 239
+ + VK ++ + ++ L D + +L E+MK E++ N ++ L
Sbjct: 392 DLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNL 451
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
KAL + + E SG +T+TYN I+ L + + + V ++M G
Sbjct: 452 CSSGKL-AKALDLLKEM-EVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGR 509
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
+ T+ + ++DA +L + M+ +P NN
Sbjct: 510 NAITFNTLIDGLCNAERIDDAAELVDQMISEGLQP---------------NN-------- 546
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
Y+ I K G +A +++ M GFE D +TY+ +I GLC
Sbjct: 547 --------------VTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLC 592
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
KA R + A +L M G P K + +IQ N AL F +M E DA
Sbjct: 593 KARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAF 652
Query: 480 LLDVLINGFL-SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++ G + A+ LVEM + + P ++F+ L E LL
Sbjct: 653 TYKIVFRGLCRGGGPIKEAFDFLVEMADNGFI-PEFSSFRMLAEGLL 698
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 99/277 (35%), Gaps = 43/277 (15%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + S+ VY+ I R L G FD + ++ M+ G E I + F+DA
Sbjct: 85 GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDA 144
Query: 428 ----CNVLD--------------------------------EMEENGCIPDIKTWTILIQ 451
N LD EM G PD+ T+ +I
Sbjct: 145 FDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVID 204
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C A + A+L +M + D L+ GF+ + + A +L M E +
Sbjct: 205 ALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSE-MGCS 263
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEF 568
P T LI R+ +A+ ++ + P F +++ G V+ A +
Sbjct: 264 PTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKV 323
Query: 569 LKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKDLL 603
L L ++E P Y V N G EAK ++
Sbjct: 324 L-GLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIV 359
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 150/332 (45%), Gaps = 8/332 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
Y ++ LA ++ +M++ GYE+ + + + R + + DA+ L + +
Sbjct: 47 AYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEV 106
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+P + ++ + N D+ F ++ ++ G Y + L K G
Sbjct: 107 KGSCLEPDIVLYNVCIDCFGKAGNVDMACKF--FHELKAQGLKPDDVSYTSMIWVLCKAG 164
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R EAE++ M+ P Y+ +I G AGRFEDA +L+ + E GCIP + ++
Sbjct: 165 RLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFN 224
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
++ +VD AL F ++M+K+ + ++ +++I+ RV AY++L EM E
Sbjct: 225 SILTCLGKKRKVDEALSLF-EVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEM-EH 282
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVED 564
L P T ++++L AR+LEEA + ++ P + I K G V++
Sbjct: 283 ASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDE 342
Query: 565 ASE-FLKALSVKEYPSSAAYLQVFESFFNEGR 595
A F K L + Y + +FF GR
Sbjct: 343 AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGR 374
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 125/307 (40%), Gaps = 38/307 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + +Y+ ++ L + R+ N+ MK++G+ +D Y + F K + A
Sbjct: 424 GFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKA 483
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ E M + +P+V + Y I
Sbjct: 484 YEILEEMKEKCVQPTV-------------------------------------ATYGAIV 506
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K+ R DEA + + K+ G E + + YS +I G K GR ++A +L+EM + G
Sbjct: 507 DGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 566
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ TW L+ A E++ AL+CF M E + +LING ++ N A+
Sbjct: 567 PNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVF 626
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+M +K L P T+ T+I L + +A +L K P F I
Sbjct: 627 WQDM-QKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMS 685
Query: 561 TVEDASE 567
A E
Sbjct: 686 NANRAME 692
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 158/339 (46%), Gaps = 18/339 (5%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+S N +LT L + R +AL F + + + + N+ TYN I+ +L V + + ++
Sbjct: 221 VSFNSILTCLGKKRKVD-EALSLFEVMKKDA--EPNSSTYNIIIDMLCLGGRVEEAYRIL 277
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP-SVQDCSLL--LRSI 346
+EM+ ++ T + + K R +E+A K+FE P V CSL+ L
Sbjct: 278 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 337
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
++ +R+ K G++ + VY + R GR ++ K+ K + G +P
Sbjct: 338 GQVDE-----AYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCKP 392
Query: 407 DNI---TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
D TY +F KAG E + +++ G +PD+++++ILI G A +
Sbjct: 393 DLTLLNTYMDCVF---KAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F M ++ + DA + +++GF +V+ AY++L EM EK ++P AT+ +++
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKC-VQPTVATYGAIVDG 508
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
L RL+EA L K + + I FG V
Sbjct: 509 LAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKV 547
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/486 (21%), Positives = 207/486 (42%), Gaps = 44/486 (9%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL 183
+FRP+ + Y++++ L ++ LR+M+E + + +++ L + + +D
Sbjct: 40 KFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADA 99
Query: 184 AALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
AL +D V + + D+VL + D GK ++++ F
Sbjct: 100 LAL------------VDEVKGSCLEPDIVLYNVCIDCFGKA---GNVDMACKF------- 137
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+ +KA G K + ++Y ++ VL + + + + +M+ E
Sbjct: 138 --FHELKA----------QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCA 185
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
Y + + EDA KL E + + PSV + +L + D L
Sbjct: 186 YAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 245
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K ++ NS S Y+ I L GR +EA +++ M++A P+ +T + ++ LCKA
Sbjct: 246 MKKDAEPNS---STYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKA 302
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ E+A + + + GC PD T+ LI G +VD A F KM++ ++A+ +
Sbjct: 303 RKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVY 362
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
LI F R +K+ E+I + +P T ++ + A +E+ + ++
Sbjct: 363 TSLIRNFFIHGRKEDGHKVFKELIRR-GCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIR 421
Query: 542 KQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHY 597
+ P + + ++K G + S A+ + + A AY V + F G+ +
Sbjct: 422 SYGFLPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVH 481
Query: 598 EAKDLL 603
+A ++L
Sbjct: 482 KAYEIL 487
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 3/251 (1%)
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
GY + ++ + R ++DAV M ++P+ ++L+ +++ P+
Sbjct: 5 GYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERA 64
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
L + + + +G + ++ + RAL + G+ +A ++ +K + EPD + Y+ I
Sbjct: 65 L--ELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCI 122
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
KAG + AC E++ G PD ++T +I C A + A FA+M +
Sbjct: 123 DCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV 182
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
A + +I G+ S R AYKLL + E+ + P +F +++ L R+++EA++
Sbjct: 183 PCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCI-PSVVSFNSILTCLGKKRKVDEALS 241
Query: 536 LLRLMKKQNYP 546
L +MKK P
Sbjct: 242 LFEVMKKDAEP 252
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 4/209 (1%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG L + AL + R D+A + M+ F P Y+ +I L +A R E
Sbjct: 4 LGYGLPNQACADLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPER 63
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +L +M+E G + +T L++ +V AL ++ + D L +V I+
Sbjct: 64 ALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCID 123
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F V+ A K E+ + L+P ++ ++I L A RL EA L M+ +
Sbjct: 124 CFGKAGNVDMACKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSV 182
Query: 547 PFPEPFVQYISKFGTV---EDASEFLKAL 572
P + I +G+ EDA + L+ L
Sbjct: 183 PCAYAYNTMIMGYGSAGRFEDAYKLLERL 211
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAIIETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDTCKKM 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + +E +++ Y S+ ++L+ D+ L V +
Sbjct: 108 LEHLVKLKYFNLVWAFYEEILECGYPASLYFFNILMHRFC--KEGDIRLAQSVFDAITKW 165
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG +E K+ AM +G +PD TYS +I GLCK + +DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 226 NELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYG 285
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +N A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 286 LCKKGALNQAHDLMDEMSMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 344
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + ++ LS P + Y + F +G ++ LL
Sbjct: 345 DDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLL 404
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 103/247 (41%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 166 GLRPSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LFE M+ P+ + L+ DL + V++ + L SL + Y+
Sbjct: 226 NELFEEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEVYK-----QMLSQSLLPDLITYN 280
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G ++A +M M G +PD ITY+ +I G CK G + A M +
Sbjct: 281 TLIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQE 340
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 341 NIRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKG 400
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 401 SKLLKEM 407
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V V ++M + D+ TY + K + A
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQA 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ + D R E++ L Y +
Sbjct: 296 HDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENI--RLDDVAYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR +AEKMM+ M + G +PD TY+ +I CK G +L EM+ +G
Sbjct: 354 SGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHA 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|147840993|emb|CAN64120.1| hypothetical protein VITISV_037241 [Vitis vinifera]
Length = 418
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 16/273 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-------IKISRQFQKFRMM 317
N TYN ++ + D WNV +EM ++ ++ T+ + SR + R+
Sbjct: 147 NVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRLK 206
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
ED VK+F KP+ + L++ + +N +L L F + + + L +Y
Sbjct: 207 EDMVKVFN------VKPNAFVYASLMKGLCRVN--ELSLAFELKKEMVANKLRLDSGIYS 258
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K+GR DE +++ M+ G +PD +TY+ +I G C FE A VL+EM
Sbjct: 259 TLIAALFKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVK 318
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PD+ ++ ++I G C + A F M + D +L +G + N A
Sbjct: 319 GCKPDVISYNVIISGLCKEGKWREANDLFEDMPRRGCTPDVGSYRILFDGLCEGMQFNEA 378
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+L EM+ K P A+ +E L R L
Sbjct: 379 AFILDEMVFK-GYAPKSASXTKFVEALCSGREL 410
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 91/209 (43%), Gaps = 6/209 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ TY+ +I C +GR DA NV DEM P++ T+ LI G C + +D A
Sbjct: 146 PNVCTYNILINACCLSGRLGDAWNVFDEMLRKHVCPNVVTFGTLISGLCRDSRLDEASRL 205
Query: 466 FAKMMEK-NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
M++ N +A + L+ G ++ A++L EM+ +LR + TLI L
Sbjct: 206 KEDMVKVFNVKPNAFVYASLMKGLCRVNELSLAFELKKEMVAN-KLRLDSGIYSTLIAAL 264
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEY-PSS 580
R +E +L M++ P + IS F +D A L+ + VK P
Sbjct: 265 FKVGRKDEVFVVLEEMRENGCKPDTVTYNAMISGFCNEKDFEAAYGVLEEMVVKGCKPDV 324
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
+Y + EG+ EA DL P
Sbjct: 325 ISYNVIISGLCKEGKWREANDLFEDMPRR 353
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 145/335 (43%), Gaps = 37/335 (11%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A G FR +GE +G + + +TY+ I+ L + V + ++ MK +G +I TY
Sbjct: 244 VAAAGLFRKMGE-AGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 302
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------PDLG 355
+ + F +A + MM P++ SLL+ N ++G
Sbjct: 303 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMG 362
Query: 356 LVFRVANKYESL--GNSLSKSV---------------------YDGIHRALTKLGRFDEA 392
+ V Y SL G SL V Y+ + K R EA
Sbjct: 363 VEPNVVT-YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEA 421
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+++ M + G PD ++Y+ +I GLC+ GR +A ++ M NG +PD+ T++IL+ G
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + +A F M + + ++LI+ + + A KL E+ + L+P
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ-GLQP 540
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ T+I L L+EA+ R M++ PP
Sbjct: 541 NVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 575
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 131/287 (45%), Gaps = 4/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+N ++ L + + ++M GY+ D+ TY I K A
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAA 246
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF M + +P V S ++ S+ + L + + ++ G S + Y+ +
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL--DIFSYMKAKGISPNIFTYNSLI 304
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L R+ EA M+ M + P+ +T+S +I CK G +A VL M E G
Sbjct: 305 QGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVE 364
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++ L+ G+ EV A F M+ K D ++LING+ KR+ A +L
Sbjct: 365 PNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQL 424
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYP 546
EMI + L P ++ TLI+ L RL EA +L + ++ N P
Sbjct: 425 FNEMIHQ-GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLP 470
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/375 (24%), Positives = 162/375 (43%), Gaps = 16/375 (4%)
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
N +L+ + ++R Y + + + E +G +T T + ++ + + V ++V+ ++
Sbjct: 125 NKLLSAIVKMRHYHDAVISLSKQM-ELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKI 183
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K G ++ I T+ + K AV+LF+ M+ Y+P V + ++ + I
Sbjct: 184 IKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKI--- 240
Query: 353 DLGLVFRVANKYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
G A + +G + + Y I +L K R +EA + MK G P+
Sbjct: 241 --GETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIF 298
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I GLC R+ +A +L+EM +P+I T+++LI C V A M
Sbjct: 299 TYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTM 358
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
E + + L+NG+ Q V A KL MI K +P ++ LI A+R
Sbjct: 359 TEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITK-GCKPDVFSYNILINGYCKAKR 417
Query: 530 LEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQ 585
+ EA L M Q P + + + G + +A + K L+ P Y
Sbjct: 418 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 477
Query: 586 VFESFFNEGRHYEAK 600
+ + F +G Y AK
Sbjct: 478 LLDGFCKQG--YLAK 490
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 176/399 (44%), Gaps = 27/399 (6%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+ ++P Y+ ++ L R+M E C + TY +I+ L K ++ ++
Sbjct: 221 RGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 280
Query: 183 LAALNQFHDGMVKEIA-----MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
AL+ F K I+ +++ + L + S W + E M + + N V
Sbjct: 281 --ALDIFSYMKAKGISPNIFTYNSLIQGLCNF---SRWREASAMLNEMMSLNIMPNIVTF 335
Query: 238 VL------KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
L KE ++ +A G + + E G + N +TY+ ++ + V + + +
Sbjct: 336 SLLINIFCKEGNVF--EARGVLKTMTEM-GVEPNVVTYSSLMNGYSLQAEVVEARKLFDV 392
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M +G + D+ +Y + + K + + +A +LF M+ P + + L+ +
Sbjct: 393 MITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQ--- 449
Query: 352 PDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
LG + + ++++ GN Y + K G +A ++ +AM++ +P+
Sbjct: 450 --LGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ Y+ +I +CK+ ++A + E+ G P+++ +T +I G C +D AL F
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRN 567
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M E + +V+I GFL K + A +L+ EM EK
Sbjct: 568 MEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 131/292 (44%), Gaps = 7/292 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + + YN ++ L ++ V++ V M G D TY + F + +
Sbjct: 248 ESEGVKASAVPYNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEEL 307
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVY 376
E A+++ M+ + PS +CS + I + +L F +A K LG + Y
Sbjct: 308 EMALRITHDMIRLGFVPSEANCSFM---IDELRKKELVEEAFSLACKLGDLGMVPNVFAY 364
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K RFD+A+++ K M G EP+ +TY+ +I LCK G EDA + D+M +
Sbjct: 365 NALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRD 424
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G + + LI G+C +DRA + M+++ A LI G ++
Sbjct: 425 KGIKVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSS 484
Query: 497 AYKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L EM E R W TF LI ++++EA L M N P
Sbjct: 485 CMELHREMAE--RGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIP 534
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 109/264 (41%), Gaps = 38/264 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N YN ++ L ++E D + +EM G E + TY + K M+EDA
Sbjct: 356 GMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTYAILIHALCKRGMIEDA 415
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M D K +V Y SL N K
Sbjct: 416 LCLFDKMRDKGIKVTVY-------------------------PYNSLINGYCKQ------ 444
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G D A ++ M G P +YS +I GLC+ G + EM E G
Sbjct: 445 ------GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIA 498
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+T LI G C ++D A F KM++ N + +V+I G+ + A++L
Sbjct: 499 WNNYTFTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQL 558
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL 524
+M+E + L+P T+++LI L
Sbjct: 559 YDQMVE-MGLKPDNYTYRSLISGL 581
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 4/241 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K+ FR + E G K + I Y ++ L++ E++ N ++M +GY + T+ +
Sbjct: 659 KSCVLFREMKEQ-GVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVL 717
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + A L + M+ G P+ + L ++ + + A L
Sbjct: 718 INNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHL 777
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ +S ++ + + L K G+ EA +M + +GF PD I+YS +I LCK G A
Sbjct: 778 ASIVS---FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKA 834
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM G PD+ + I I+ E D+AL + M+ + D L++G
Sbjct: 835 FELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSG 894
Query: 488 F 488
Sbjct: 895 I 895
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 103/244 (42%), Gaps = 13/244 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L + VY RA + D A ++ M++ G + + Y+ +++GLCK R ++A
Sbjct: 216 GVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMYGLCKNMRVQEA 275
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
V + M G D T+ L+ G C E++ AL M+ + +I+
Sbjct: 276 VEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVPSEANCSFMIDE 335
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ V A+ L ++ + + + P + LI+KL R ++A L + M + P
Sbjct: 336 LRKKELVEEAFSLACKLGD-LGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEP 394
Query: 548 FPEPF---VQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + + K G +EDA K + V YP Y + + +G A
Sbjct: 395 NEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYP----YNSLINGYCKQGSLDRA 450
Query: 600 KDLL 603
+ LL
Sbjct: 451 RGLL 454
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 153/390 (39%), Gaps = 51/390 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +Y+ ++ L R+ + + EM + G + T+ + F K + M++A
Sbjct: 461 GLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEA 520
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------PDLGL------------- 356
+LF+ M+D P+ ++++ + N ++GL
Sbjct: 521 ARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISG 580
Query: 357 -------------VFRVANKYESLGN-SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
V + N Y L N SL+ +Y G R GRF E + M
Sbjct: 581 LCLTSGVSKANEFVADLENSYAVLNNFSLTALLY-GFFRE----GRFTETYHLWDEMAVR 635
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + D ++++ +++ K E +C + EM+E G PD +T +I + +A
Sbjct: 636 GVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQA 695
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
L C+ +M+ Y + VLIN + A L EM+ L P + T+ ++
Sbjct: 696 LNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL-PNKFTYNCFLD 754
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKEY-PS 579
+E+A +L M + + ++ + K G +++A + + ++ + P
Sbjct: 755 YFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPD 814
Query: 580 SAAYLQVFESFFNEGRHYEA----KDLLYK 605
+Y + G +A ++LYK
Sbjct: 815 CISYSTIIHELCKMGDINKAFELWNEMLYK 844
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 261 GYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G+ ++YN IL + R +SV+ + +EM + G ++ TY + R F +E
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ F M P+V + ++ + + +G F++ G + + Y+ +
Sbjct: 222 GLXFFGEMERNGCLPNVVTYNTIIDAYCKLR--KIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + G+ E ++++ M + PD +T++ +I G C G F A + EM +NG
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+T LI C A ++RA+ +M ++ + LI+GF Q + AY+
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
++ EM+E P T+ LI R+E+A LL+ M ++ + P + IS F
Sbjct: 400 IMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 560 G---TVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+E A + + K P A Y + + + R E DL
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 26/365 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +TY ++ + + ++ +++M+ G + TY + F + ++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYD 377
A ++ + M++ + P++ + L+ + + GL+ + + G Y
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER----GFIPDVVSYS 452
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + ++A ++ M G PD TYS +I GLCK R + C++ EM
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD T+T LI +C ++D+AL +M++K + D +VLINGF Q R A
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEK-----------LLGARRLEEAMN----LLRLMKK 542
+LL++++ + + P + T+ TLI+ L+ ++ MN +L M +
Sbjct: 573 KRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631
Query: 543 QNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ Y E + I SK G +E A K + + P S + + +S ++EG+ E
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691
Query: 599 AKDLL 603
LL
Sbjct: 692 LNQLL 696
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 41/263 (15%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV----------------- 414
S +V+D + ++ ++ ++A ++ K+ GF P ++Y+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 415 -------------------IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
I G C AG E EME NGC+P++ T+ +I +C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++ A M K + + +V+ING + ++ ++L EM K R P +
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRV 309
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
TF TLI +A+ L M K P + I+ K G + A EFL +
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 573 SVKE-YPSSAAYLQVFESFFNEG 594
+ +P+ Y + + F +G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQG 392
>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Vitis vinifera]
Length = 1045
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 62/362 (17%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV------------- 336
+EM ++G ++ TY + + K R M A +LFE M+ P+V
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 337 ----QDCSLLLRSISSINNPDLGLVFRVAN---------KYESLGNSLSKS--------- 374
+ C + R + + PD+ + F++ + Y +L + L K+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 375 --------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
VYD + K+G+ DEA+ + M G+ P+ TYS +I L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
R + A VL M EN C P++ +T +I G C + D A + M EK +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+I+GF +V+ +L+ +M K P T++ LI A L++A LL M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAK-GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNE 593
K+ +P + + I F EF+ +L + + P AY + +SF
Sbjct: 838 KQTYWPKHMAGYRKVIEGFN-----REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892
Query: 594 GR 595
GR
Sbjct: 893 GR 894
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 34/340 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ +L V + + + EEMK D+ TY + F K +++ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 321 VKLFEFMMDGPYKPSVQDCSLLL------RSISSINNPDLGLVFRVANKYESLGNSLSKS 374
K F+ M+ P+V + L+ R +SS N +F + + N ++
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE-----LFEMMLSEGCIPNVVT-- 587
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD---------------NI-TYSQVIFGL 418
Y + K G+ ++A ++ M+ PD NI TY ++ GL
Sbjct: 588 -YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CKA + ++A ++LD M GC P+ + LI G C ++D A + F KM E+ Y +
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI+ KR++ A K+L M+E P + +I+ L + +EA L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
+M+++ P + I F G V+ E ++ + K
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 10/344 (2%)
Query: 201 NVAKTLVDVV--LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
N A + DV+ G + K K L + +L++ V+ VL ++ P + FF W G
Sbjct: 96 NDAVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVK-NPELGVKFFIWAGR 154
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY H Y+ +L VL + R + E++ E E+ + R+ + +
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWN 214
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A++ + D YKPS + L+R + D + V + G ++
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTA--YLVHREMSDSGFNMDGYTLGC 272
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K GR+ EA + ++ F+ D + Y+Q+I GLC+A FE+A + L M +
Sbjct: 273 FVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIP++ T+ IL+ G ++ R + M+ + + + LI+ + + AY
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
KLL +M + +P + LI + G +L ++++L L +K
Sbjct: 390 KLLKKMGD-CGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEK 431
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 102/467 (21%), Positives = 189/467 (40%), Gaps = 63/467 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ + L+Q M D C TY +++ KA+K +++
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK---MSSA 569
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGK------------------KLEDM 226
N+ + M+ E + NV L+D S +K + K++D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 227 KIELSDNFVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
I + F L + + + VK V G + N I Y+ ++ + + +
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
V +M + GY ++ TY + + K + ++ A+K+ M++ P+V + ++
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + D +R+ + E G + Y + K G+ D+ ++M+ M G
Sbjct: 750 GLCKVGKTDEA--YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEME----------------------------- 435
P+ +TY +I C AG +DA +LDEM+
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLL 867
Query: 436 ----ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYD-ADADLLDVLINGFL 489
EN +P I + ILI C A ++ AL +M +Y AD DL LI
Sbjct: 868 DEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLS 927
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+V+ A++L +MI++ + P + F L++ L+ R EEA+ L
Sbjct: 928 LASKVDKAFELYADMIKRGGI-PELSIFFYLVKGLIRINRWEEALQL 973
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 156/365 (42%), Gaps = 25/365 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L R + ++ M EG + + + + A KL
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNS---LSKSVYDGIH 380
+ M D +P ++L+ I P L ++ Y + ++ L+K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L G+F++A +++ M + GF PD TYS+VI LC A + ++A + +EM+ N +
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C + +A F +M+ + LI+ +L ++++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP------------F 548
EM+ P T+ LI+ + ++E+A + M+ P
Sbjct: 573 F-EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 549 PEP-------FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
+P V + K V++A + L +SV+ P+ Y + + F G+ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 601 DLLYK 605
+ K
Sbjct: 692 MVFTK 696
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+L++ +S + NP+LG+ F + + +G + VY + L G E+ ++ +
Sbjct: 130 TLVVDVLSLVKNPELGVKFFIWAGRQ-IGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI 188
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ E + +I C+ G + A L +++ G P T+ L++ A+ +
Sbjct: 189 RDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A L +M + ++ D L ++ R ++ + +IEK + +
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYTQ 304
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I L A EEAM+ L M+ + P
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIP 332
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 176/401 (43%), Gaps = 34/401 (8%)
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY-----PV 247
+V + +AK + +V+ W+ +K + N T+L ++ +
Sbjct: 4 LVFQCGETQLAKIVCGIVVKGHWNSL-------LKPNVGSNLTSTILNQVLLNLSLDGCC 56
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---------- 297
+ FF+WV + + H+ + ++ LA+H+ + N++E + Y
Sbjct: 57 VSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTAQNLLERIAVRDYLSSPSVLNAV 116
Query: 298 ---EMDIDTYIKISRQFQKF----RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
D D+ +I F RM +DA+++FE M +KP + C++LL S++
Sbjct: 117 VRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMRVHGFKPHLHACTVLLNSLAKAR 176
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
++ V++V K +G + +++ + A K G ++AE+++ M++ PD T
Sbjct: 177 LTNM--VWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFT 234
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I CK G +A + D ME G PDI T+ LI G C + AL F ++
Sbjct: 235 YNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREI- 293
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ LI+G+ + A +L E++E L P T+ +++ KL ++
Sbjct: 294 -NGATPNHVTYTTLIDGYCRVNDLEEALRLR-EVMEVEGLHPGVVTYNSILRKLCEEGKI 351
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKA 571
++A LL M ++ P I+ + + D +K
Sbjct: 352 KDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 139/348 (39%), Gaps = 11/348 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ + V ++ EM+ D+ TY + + K M +A
Sbjct: 192 GVVPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEA 251
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ + + M G P + + L+ L +FR N G + + Y +
Sbjct: 252 LGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREIN-----GATPNHVTYTTL 306
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
++ +EA ++ + M+ G P +TY+ ++ LC+ G+ +DA +L+EM E
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T LI +C ++ A+ KM+E D LI+GF V+ A +
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYI 556
L EM++ P +T+ L++ E + L + ++ ++ +
Sbjct: 427 FLFEMLD-AGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRL 485
Query: 557 SKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDLL 603
K +E A + K S Y + ++F G+ A D+L
Sbjct: 486 CKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDML 533
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 6/263 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR E +G N +TY ++ R + + + E M+ EG + TY I
Sbjct: 285 EALRLFR---EINGATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSI 341
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
R+ + ++DA +L M + +P C+ L+ + I D+G +V K
Sbjct: 342 LRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIG--DMGSAMKVKKKMLEA 399
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + + KL D A++ + M +AGF P TYS ++ E
Sbjct: 400 GLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAV 459
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DE+ G DI + LI+ C ++++ A F M K D+ + L
Sbjct: 460 IRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYA 519
Query: 488 FLSQKRVNGAYKLLVEMIEKVRL 510
+ + A +L EM +K RL
Sbjct: 520 YFKAGKAIAASDMLDEM-DKRRL 541
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 39/230 (16%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYI 305
R V E G +TYN ILR L ++D ++ EM + E D I+ Y
Sbjct: 322 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 381
Query: 306 KI----SRQFQKFRMMEDAVK-------------------------LFEFMMDGPYKPSV 336
KI S K +M+E +K LFE M+D + PS
Sbjct: 382 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFE-MLDAGFSPSY 440
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
S L+ S +N + V R+ ++ G + SVY + R L K+ + + AE++
Sbjct: 441 STYSWLVDSYYDQDNKEA--VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIF 498
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
M+ G + D++ Y+ + + KAG+ A ++LDEM++ + +K +
Sbjct: 499 TLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIY 548
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 162/382 (42%), Gaps = 44/382 (11%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK E+R P A FF W + Y HN Y ++ VLA + V
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V E+KK + M + + + F K M+E+ + ++ M + +P++
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY-------- 223
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
Y L N L +++ D AE++ + M++ +
Sbjct: 224 -----------------TYNFLMNGLVSAMF------------VDSAERVFEVMESGRIK 254
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G CKAG+ + A L +ME G D T+ +IQ A ++ +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ +M EK ++I G + ++N Y + MI K +P A + LI+
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYA 373
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSA 581
+ +E+A+ LL M + + P + V + K G VE+A ++ +S
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + + GR EA+ L
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLF 455
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 5/350 (1%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V E K + +TYN +++ + + + +M+ G+E D TY+ + +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
V L++ M + + SL++ + + G + V G+ + ++
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG--YTVFENMIRKGSKPNVAI 364
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + K G ++A +++ M + GF+PD +TYS V+ GLCK GR E+A +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+G + ++ LI G A VD A F +M EK D+ + LI+ F ++V+
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L M E+ T+ L+ + R EEA+ L +M + P F
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 556 ISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G V A + L L+ AA + + GR EA L
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKL 594
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 42/279 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL +F G N++ Y+ ++ L + V + + EEM ++G D Y +
Sbjct: 415 EALDYFH-TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K R +++A+ LF+ M E
Sbjct: 474 IDAFTKHRKVDEAIALFKRM------------------------------------EEEE 497
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y + + K R +EA K+ M + G P + + GLC +G+ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
C +LDE+ G I D +I C A + A + E+ + + V+IN
Sbjct: 558 CKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINA 616
Query: 488 FLSQKRVNGAYKLLVEMI----EKVRLRPWQATFKTLIE 522
+ + A KL+ I E++ + F TL+E
Sbjct: 617 LRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 154/347 (44%), Gaps = 11/347 (3%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K +TY ++ + + +++EM + + D+ TY I R + ++ A +
Sbjct: 193 KPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQ 252
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ + Y P V ++LLR + + + G + + + + G + Y + +
Sbjct: 253 IISSISSKGYAPDVITYNILLRGLLNQGKWEAG--YELMSDMVARGCEANVVTYSVLISS 310
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ + G+ +E ++K MK G +PD Y +I LCK GR + A VLD M +GC+PD
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
I + ++ C D AL F K+ E +A + + + S A +++
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMIL 430
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY------I 556
EM++K + P T+ +LI L ++EA+ LL M+ ++ P V Y +
Sbjct: 431 EMLDK-GVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPS-VVSYNIVLLGL 488
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K V DA E L A+ K P+ Y + E G +A+DL
Sbjct: 489 CKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDL 535
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 136/326 (41%), Gaps = 43/326 (13%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+++ +++ +KP V C+ L+ + + D + +V + E+ G+ Y+
Sbjct: 75 ESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAI--QVMHILENHGHP-DLIAYNA 131
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK------------------ 420
I + R D A +++ MKN GF PD +TY+ +I LC
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKEN 191
Query: 421 -----------------AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
G ++A +LDEM E PD+ T+ +I+G C VDRA
Sbjct: 192 CKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAF 251
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ + K Y D ++L+ G L+Q + Y+L+ +M+ + T+ LI
Sbjct: 252 QIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVAR-GCEANVVTYSVLISS 310
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL-SVKEYPS 579
+ ++EE + LL+ MKK+ P +P + + K G V+ A E L + S P
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y + + R EA + K
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEK 396
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 141/334 (42%), Gaps = 41/334 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + ITYN +LR L + ++ +M G E ++ TY + + +E+
Sbjct: 261 GYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEG 320
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M KP + Y YD +
Sbjct: 321 VGLLKDMKKKGLKP---------------------------DGY----------CYDPLI 343
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR D A +++ M + G PD + Y+ ++ LCK R ++A ++ +++ E GC
Sbjct: 344 AALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCS 403
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ ++ + + RAL +M++K D D + LI+ V+ A +L
Sbjct: 404 PNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIEL 463
Query: 501 LVEM-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
LV+M +E +P ++ ++ L R+ +A+ +L M + P + ++ I
Sbjct: 464 LVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGI 523
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESF 590
G + DA + L + S ++ +++++F
Sbjct: 524 GFGGCLNDARDLATTLVNMDAISEHSFERLYKTF 557
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 124/266 (46%), Gaps = 18/266 (6%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P + + + + R++SS++ P + K L SLS+S K G F+E+
Sbjct: 30 PILNETTNINRTLSSVSKPQ---THTLDFKDTHLLKSLSRSC---------KAGNFNESL 77
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ + N G +PD + +++I GL + + A V+ +E +G PD+ + +I G
Sbjct: 78 YFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNAIITGF 136
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C AN +D A +M K + D ++LI S+ ++ A + +++ K +P
Sbjct: 137 CRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLL-KENCKPT 195
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
T+ LIE L ++EAM LL M + N P ++ + + G V+ A + +
Sbjct: 196 VVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIIS 255
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGR 595
++S K Y P Y + N+G+
Sbjct: 256 SISSKGYAPDVITYNILLRGLLNQGK 281
>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
Length = 946
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 28/346 (8%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+W E G N +TY ++ + + V + E M EG +I TY +
Sbjct: 498 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 557
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K +E A ++FE R S + PD+ + F+ +Y+
Sbjct: 558 CKAGQVEKACQIFE------------------RMCGSKDVPDVDMYFK---QYDDNSERP 596
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y + K R +EA K++ AM G EP+ I Y +I GLCK G+ ++A V
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM E+G + T++ LI + D A +KM+E + + + +I+G
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ + AYKL+ +M+E+ +P T+ +I+ ++E + LL M + P
Sbjct: 717 GKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 775
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNE 593
+ + + K G ++ A L+ + +P+ +A Y +V E F E
Sbjct: 776 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 821
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 134/591 (22%), Positives = 248/591 (41%), Gaps = 77/591 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L + KL+ V+ VLR L P +FF W + ++ ++ VY+ ++ +V D
Sbjct: 82 LRQFREKLSESLVIEVLR-LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 140
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K L+++++D ++E + L VL K + S AL + G +K+
Sbjct: 141 KVPEEFLQQIRDD----DKEVFGQFLNVLVRKHCRNGSFSIALEEL--GRLKDFRFRPSR 194
Query: 204 KT---LVDVVLGSDWDD-----------------------------KIGKKLEDMKIELS 231
T L+ L +D D K+GK E + + +
Sbjct: 195 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 254
Query: 232 DNFV---------LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+NFV ++ L E ++ +A+ F + S N +TY+ +L + +
Sbjct: 255 ENFVPDTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQL 312
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+ M EG + + + A KL + M+ + P ++L
Sbjct: 313 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 372
Query: 343 LRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ SI S+N L L + ++ + G L+K R L G++++A +++
Sbjct: 373 IGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 432
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GF PD TYS+V+ LC A + E A + +EM+ G + D+ T+TI++ C A
Sbjct: 433 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 492
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A F +M E + LI+ +L K+V+ A +L M+ + L P T+
Sbjct: 493 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYS 551
Query: 519 TLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY--------ISKFGT-------- 561
LI+ A ++E+A + R+ ++ P F QY + +G
Sbjct: 552 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 611
Query: 562 --VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
VE+A + L A+S++ P+ Y + + G+ EA+++ + H
Sbjct: 612 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEH 662
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TY ++ + ++E M +G + TY + K +
Sbjct: 730 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 789
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M + ++ + LGL+ + + SVY
Sbjct: 790 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD----DTAPFLSVYR 845
Query: 378 GIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ L K R + A ++++ A +A + TY+ +I LC A + E A + EM
Sbjct: 846 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 905
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ G IP+++++ LI+G +++ ALL
Sbjct: 906 KKGVIPEMQSFCSLIKGLFRNSKISEALL 934
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + +++ M+++G + ++ TY + F +E ++L
Sbjct: 702 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 761
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
E M P+ +L+ D+ L+ + + + + V +G ++
Sbjct: 762 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 821
Query: 383 LTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGCI 440
+ LG DE + A P Y +I L KA R E A +L+E+ + +
Sbjct: 822 FIESLGLLDEIGQDDTA-------PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 874
Query: 441 PDIK-TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D T+ LI+ C AN+V+ A F++M +K + LI G +++ A
Sbjct: 875 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 934
Query: 500 LL 501
LL
Sbjct: 935 LL 936
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L+++ + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +++EM ++G + + TY ++ + + + +A+ +F M + KP
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + ++ G S Y I L K G A
Sbjct: 433 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
K+ M + G P+ +TY+ ++ KA +++A + +M+ G PD T++I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC E A+ F +M +KN+ D + +L++ + V A++ M+ L
Sbjct: 549 LGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGL 605
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L ++ EA LL+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +A NV ++M+E GC PD
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M D V+IN + A+KL
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+++ P T+ +++ AR + A+ L R M+ + P
Sbjct: 494 EMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 134/337 (39%), Gaps = 55/337 (16%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR----------- 126
W E L+ L ++ VL+++ ND A FF W+ + F+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 127 ------------------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
P++ Y+ ++ + + L + +M+E C
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ TY +++ + KA A++ + ++ D +++ LG K
Sbjct: 433 DRVTYCTLIDIHAKAGFLD--IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 223 LEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
L ++ ++ N ++ + + R Y AL +R + +++G++ + +TY+ ++ V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ-NALKLYRDM-QNAGFEPDKVTYSIVMEV 548
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + V EM+++ + D Y + + K +E A + ++ M+ +P+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V C+ LL + +N ++A YE L N L+
Sbjct: 609 VPTCNSLLSTFLRVN--------KIAEAYELLQNMLA 637
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 8/356 (2%)
Query: 253 FRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 40 FATILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKMLEHL 99
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K R + +E +++ Y S+ ++L+ + D+ + V + G
Sbjct: 100 MKLRYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKWGLRP 157
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S Y+ + +LG DE ++ AM G +PD TYS +I GLCK + +DA +
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
DEM G IP+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 218 DEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKN 277
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 278 GDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVA 336
Query: 552 FVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P Y + F +G ++ LL
Sbjct: 337 YTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLL 392
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 103/260 (39%), Gaps = 33/260 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 321 VKLFEFMM---------------DGPYKPSVQDCSL----------LLRSISSIN----- 350
+LF+ M+ DG K D ++ LL + + N
Sbjct: 214 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 273
Query: 351 ---NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
N DL + ++ G K Y + K G D A K K M D
Sbjct: 274 LCKNGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLD 333
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++ Y+ +I GLC+ G+ DA +L EM G PDI T+T++I C +V +
Sbjct: 334 DVAYTALISGLCQEGQSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLK 393
Query: 468 KMMEKNYDADADLLDVLING 487
+M + +VL+NG
Sbjct: 394 EMQRNGHAPSVVTYNVLMNG 413
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L+++ + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +++EM ++G + + TY ++ + + + +A+ +F M + KP
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + ++ G S Y I L K G A
Sbjct: 433 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
K+ M + G P+ +TY+ ++ KA +++A + +M+ G PD T++I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC E A+ F +M +KN+ D + +L++ + V A++ M+ L
Sbjct: 549 LGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGL 605
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L ++ EA LL+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +A NV ++M+E GC PD
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M D V+IN + A+KL
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+++ P T+ +++ AR + A+ L R M+ + P
Sbjct: 494 EMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 134/337 (39%), Gaps = 55/337 (16%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR----------- 126
W E L+ L ++ VL+++ ND A FF W+ + F+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 127 ------------------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
P++ Y+ ++ + + L + +M+E C
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ TY +++ + KA A++ + ++ D +++ LG K
Sbjct: 433 DRVTYCTLIDIHAKAGFLD--IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 223 LEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
L ++ ++ N ++ + + R Y AL +R + +++G++ + +TY+ ++ V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ-NALKLYRDM-QNAGFEPDKVTYSIVMEV 548
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + V EM+++ + D Y + + K +E A + ++ M+ +P+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V C+ LL + +N ++A YE L N L+
Sbjct: 609 VPTCNSLLSTFLRVN--------KIAEAYELLQNMLA 637
>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
Length = 1010
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 62/362 (17%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV------------- 336
+EM ++G ++ TY + + K R M A +LFE M+ P+V
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 337 ----QDCSLLLRSISSINNPDLGLVFRVAN---------KYESLGNSLSKS--------- 374
+ C + R + + PD+ + F++ + Y +L + L K+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 375 --------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
VYD + K+G+ DEA+ + M G+ P+ TYS +I L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
R + A VL M EN C P++ +T +I G C + D A + M EK +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+I+GF +V+ +L+ +M K P T++ LI A L++A LL M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAK-GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNE 593
K+ +P + + I F EF+ +L + + P AY + +SF
Sbjct: 838 KQTYWPKHMAGYRKVIEGFN-----REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892
Query: 594 GR 595
GR
Sbjct: 893 GR 894
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 34/340 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ +L V + + + EEMK D+ TY + F K +++ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 321 VKLFEFMMDGPYKPSVQDCSLLL------RSISSINNPDLGLVFRVANKYESLGNSLSKS 374
K F+ M+ P+V + L+ R +SS N +F + + N ++
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE-----LFEMMLSEGCIPNVVT-- 587
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD---------------NI-TYSQVIFGL 418
Y + K G+ ++A ++ M+ PD NI TY ++ GL
Sbjct: 588 -YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CKA + ++A ++LD M GC P+ + LI G C ++D A + F KM E+ Y +
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI+ KR++ A K+L M+E P + +I+ L + +EA L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
+M+++ P + I F G V+ E ++ + K
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 10/344 (2%)
Query: 201 NVAKTLVDVV--LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
N A + DV+ G + K K L + +L++ V+ VL ++ P + FF W G
Sbjct: 96 NDAVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVK-NPELGVKFFIWAGR 154
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY H Y+ +L VL + R + E++ E E+ + R+ + +
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWN 214
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A++ + D YKPS + L+R + D + V + G ++
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTA--YLVHREMSDSGFNMDGYTLGC 272
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K GR+ EA + ++ F+ D + Y+Q+I GLC+A FE+A + L M +
Sbjct: 273 FVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIP++ T+ IL+ G ++ R + M+ + + + LI+ + + AY
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
KLL +M + +P + LI + G +L ++++L L +K
Sbjct: 390 KLLKKMGD-CGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEK 431
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 156/365 (42%), Gaps = 25/365 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L R + ++ M EG + + + + A KL
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNS---LSKSVYDGIH 380
+ M D +P ++L+ I P L ++ Y + ++ L+K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L G+F++A +++ M + GF PD TYS+VI LC A + ++A + +EM+ N +
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C + +A F +M+ + LI+ +L ++++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP------------F 548
EM+ P T+ LI+ + ++E+A + M+ P
Sbjct: 573 F-EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 549 PEP-------FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
+P V + K V++A + L +SV+ P+ Y + + F G+ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 601 DLLYK 605
+ K
Sbjct: 692 MVFTK 696
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/460 (21%), Positives = 183/460 (39%), Gaps = 63/460 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ + L+Q M D C TY +++ KA+K +++
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARK---MSSA 569
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGK------------------KLEDM 226
N+ + M+ E + NV L+D S +K + K++D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 227 KIELSDNFVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
I + F L + + + VK V G + N I Y+ ++ + + +
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
V +M + GY ++ TY + + K + ++ A+K+ M++ P+V + ++
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + D +R+ + E G + Y + K G+ D+ ++M+ M G
Sbjct: 750 GLCKVGKTDEA--YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEME----------------------------- 435
P+ +TY +I C AG +DA +LDEM+
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLL 867
Query: 436 ----ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYD-ADADLLDVLINGFL 489
EN +P I + ILI C A ++ AL M +Y AD DL LI
Sbjct: 868 DEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLS 927
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+V+ A++L +MI++ + P + F L++ L+ R
Sbjct: 928 LASKVDKAFELYADMIKRGGI-PELSIFFYLVKGLIRINR 966
Score = 47.4 bits (111), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+L++ +S + NP+LG+ F + + +G + VY + L G E+ ++ +
Sbjct: 130 TLVVDVLSLVKNPELGVKFFIWAGRQ-IGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI 188
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ E + +I C+ G + A L +++ G P T+ L++ A+ +
Sbjct: 189 RDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A L +M + ++ D L ++ R ++ + +IEK + +
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYTQ 304
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I L A EEAM+ L M+ + P
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIP 332
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 19/352 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TY ++ L + + +++++M+K E D+ Y I ++ + DA
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF M + +P+V + L+R + + R ++ L + + + +
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYG--------RWSDASRLLSDMIERKINPNVV 326
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +PD TYS +I G C R ++A ++ + M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C P++ T+ LI+G C A V+ + F +M ++ + + LI G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A K+ +M+ + P T+ L++ L +LE+A+ + ++K P +
Sbjct: 447 DMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
++ + K G VED + +LS+K P+ Y + F +G EA L
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ + G+ +FR ++ +GN+++ Y+ + + L
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YNTLIQGL 440
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+K+ K M + G PD ITYS ++ GLCK G+ E A V + ++++ PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A L E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M E L P T+ TLI L
Sbjct: 561 MKEDGTL-PNSGTYNTLIRARL 581
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 29/356 (8%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
Y+ NT+T+N ++ L H + +++ M G + D+ TY + K ++ A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGI 379
L + M G + V + ++ ++ + N + L L + NK G + Y+ +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK----GIRPNVVTYNSL 296
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R L GR+ +A +++ M P+ +T+S +I K G+ +A + DEM +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T++ LI G C + +D A F M+ K+ + + LI GF KRV +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY---- 555
L EM ++ L T+ TLI+ L A + A + + M PP + Y
Sbjct: 417 LFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---DIITYSILL 472
Query: 556 --ISKFGTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+G +E KAL V EY P Y + E G+ + DL
Sbjct: 473 DGLCKYGKLE------KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 34/314 (10%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
++ +YN ++ R + V+ +M K GYE DI T + + + + +AV L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 324 FEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ M Y+P+ + +L+ R ++ PDL V N
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 367 LGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ SL K +Y I AL ++A + M N G P+ +T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I LC GR+ DA +L +M E P++ T++ LI ++ A + +M+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+++ D D LINGF R++ A + MI K P T+ TLI+ A+R+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRV 411
Query: 531 EEAMNLLRLMKKQN 544
EE M L R M ++
Sbjct: 412 EEGMELFREMSQRG 425
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + + LL +I+ +N DL V + + +
Sbjct: 50 KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL--VISLGERMQ 107
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+L S Y+ + + + A ++ M G+EPD +T S ++ G C R
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M P+ T+ LI G N+ A+ +M+ + D ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + ++ A LL +M EK ++ + T+I+ L + + +A+NL M +
Sbjct: 228 NGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + ++ + +G DAS L + K P+ + + ++F EG+ EA+
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 602 L 602
L
Sbjct: 347 L 347
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN +++ + + V + + EM + G + TY + + + + A K+F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P + S+LL + + LV +E L S + Y+ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV-----FEYLQKSKMEPDIYTYNIMIE 508
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +P+ I Y+ +I G C+ G E+A + EM+E+G +P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ T+ LI+ + + +M + DA + ++IN L R+ +Y
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 11/340 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HN TYN ++ R + ++ +M K GYE I T + + + + DA
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDG 378
V L + M++ Y+P + L+ + N + LV R+ + G + Y
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGV 155
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K G D A ++ M+ A E D + ++ +I LCK +DA N+ EME G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P++ T++ LI C+ A + M+EK + + + LI+ F+ + + A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
KL +MI++ + P T+ +LI RL++A + M ++ P + + I
Sbjct: 276 KLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 559 FGT---VEDASEFLKALSVKEYPS-SAAYLQVFESFFNEG 594
F VED +E + +S + + Y + + F++G
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 7/273 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS+ + + LL +I+ + DL V + K + LG S + Y+ + + + A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M G+EP +T S ++ G C R DA ++D+M E G PD T+T LI G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
N+ A+ +M+++ + V++NG + ++ A+ LL +M E ++
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEAD 184
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLK 570
F T+I+ L R +++A+NL + M+ + P + IS +G DAS+ L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+ P+ + + ++F EG+ EA+ L
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ + + + ++M K + DI TY + F ++ A ++F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P + + L++ + G +FR + +G++++ Y + + L
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGL 370
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G D A+K+ K M + G PD +TYS ++ GLC G+ E A V D M+++ DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T +I+G C A +VD F + K + + +I+G S++ + AY LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E L P T+ TLI L + L+R M+
Sbjct: 491 MKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 527
>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
Length = 996
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 149/362 (41%), Gaps = 62/362 (17%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV------------- 336
+EM ++G ++ TY + + K R M A +LFE M+ P+V
Sbjct: 539 DEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKS 598
Query: 337 ----QDCSLLLRSISSINNPDLGLVFRVAN---------KYESLGNSLSKS--------- 374
+ C + R + + PD+ + F++ + Y +L + L K+
Sbjct: 599 GQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDL 658
Query: 375 --------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
VYD + K+G+ DEA+ + M G+ P+ TYS +I L K
Sbjct: 659 LDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFK 718
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
R + A VL M EN C P++ +T +I G C + D A + M EK +
Sbjct: 719 DKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVT 778
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+I+GF +V+ +L+ +M K P T++ LI A L++A LL M
Sbjct: 779 YTAMIDGFGKAGKVDKCLELMRQMGAK-GCAPNFVTYRVLINHCCAAGLLDDAHQLLDEM 837
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNE 593
K+ +P + + I F EF+ +L + + P AY + +SF
Sbjct: 838 KQTYWPKHMAGYRKVIEGFN-----REFIISLGLLDEIAENVAVPIIPAYRILIDSFCKA 892
Query: 594 GR 595
GR
Sbjct: 893 GR 894
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 151/340 (44%), Gaps = 34/340 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ +L V + + + EEMK D+ TY + F K +++ A
Sbjct: 475 GFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQA 534
Query: 321 VKLFEFMMDGPYKPSVQDCSLLL------RSISSINNPDLGLVFRVANKYESLGNSLSKS 374
K F+ M+ P+V + L+ R +SS N +F + + N ++
Sbjct: 535 RKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANE-----LFEMMLSEGCIPNVVT-- 587
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD---------------NI-TYSQVIFGL 418
Y + K G+ ++A ++ M+ PD NI TY ++ GL
Sbjct: 588 -YTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGL 646
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CKA + ++A ++LD M GC P+ + LI G C ++D A + F KM E+ Y +
Sbjct: 647 CKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNV 706
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI+ KR++ A K+L M+E P + +I+ L + +EA L+
Sbjct: 707 YTYSSLIDRLFKDKRLDLALKVLSRMLEN-SCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
+M+++ P + I F G V+ E ++ + K
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAK 805
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 154/344 (44%), Gaps = 10/344 (2%)
Query: 201 NVAKTLVDVV--LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
N A + DV+ G + K K L + +L++ V+ VL ++ P + FF W G
Sbjct: 96 NDAVLISDVIRNTGDGFGHKTQKFLRQFREKLNETLVVDVLSLVK-NPELGVKFFIWAGR 154
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY H Y+ +L VL + R + E++ E E+ + R+ + +
Sbjct: 155 QIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRNGLWN 214
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A++ + D YKPS + L+R + D + V + G ++
Sbjct: 215 VALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTA--YLVHREMSDSGFNMDGYTLGC 272
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K GR+ EA + ++ F+ D + Y+Q+I GLC+A FE+A + L M +
Sbjct: 273 FVHLLCKAGRWREA---LALIEKEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSS 329
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIP++ T+ IL+ G ++ R + M+ + + + LI+ + + AY
Sbjct: 330 CIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAY 389
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
KLL +M + +P + LI + G +L ++++L L +K
Sbjct: 390 KLLKKMGD-CGCQPGYVVYNILIGGICGNEKL-PSLDVLELAEK 431
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 188/467 (40%), Gaps = 63/467 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y++++ + L+Q M D C TY +++ KA+K S +
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMS---SA 569
Query: 187 NQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGK------------------KLEDM 226
N+ + M+ E + NV L+D S +K + K++D
Sbjct: 570 NELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDG 629
Query: 227 KIELSDNFVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
I + F L + + + VK V G + N I Y+ ++ + + +
Sbjct: 630 NIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDE 689
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
V +M + GY ++ TY + + K + ++ A+K+ M++ P+V + ++
Sbjct: 690 AQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMID 749
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + D +R+ + E G + Y + K G+ D+ ++M+ M G
Sbjct: 750 GLCKVGKTDEA--YRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEME----------------------------- 435
P+ +TY +I C AG +DA +LDEM+
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLL 867
Query: 436 ----ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYD-ADADLLDVLINGFL 489
EN +P I + ILI C A ++ AL +M +Y AD DL LI
Sbjct: 868 DEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLS 927
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+V+ A++L +MI++ + P + F L++ L+ R EEA+ L
Sbjct: 928 LASKVDKAFELYADMIKRGGI-PELSIFFYLVKGLIRINRWEEALQL 973
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 156/365 (42%), Gaps = 25/365 (6%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L R + ++ M EG + + + + A KL
Sbjct: 333 NVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLL 392
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNS---LSKSVYDGIH 380
+ M D +P ++L+ I P L ++ Y + ++ L+K +
Sbjct: 393 KKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLA 452
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L G+F++A +++ M + GF PD TYS+VI LC A + ++A + +EM+ N +
Sbjct: 453 RCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVV 512
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C + +A F +M+ + LI+ +L ++++ A +L
Sbjct: 513 PDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANEL 572
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP------------F 548
EM+ P T+ LI+ + ++E+A + M+ P
Sbjct: 573 F-EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNI 631
Query: 549 PEP-------FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
+P V + K V++A + L +SV+ P+ Y + + F G+ EA+
Sbjct: 632 RDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQ 691
Query: 601 DLLYK 605
+ K
Sbjct: 692 MVFTK 696
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+L++ +S + NP+LG+ F + + +G + VY + L G E+ ++ +
Sbjct: 130 TLVVDVLSLVKNPELGVKFFIWAGRQ-IGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI 188
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ E + +I C+ G + A L +++ G P T+ L++ A+ +
Sbjct: 189 RDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRL 248
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D A L +M + ++ D L ++ R ++ + +IEK + +
Sbjct: 249 DTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGR----WREALALIEKEEFKLDTVIYTQ 304
Query: 520 LIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I L A EEAM+ L M+ + P
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIP 332
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 150/345 (43%), Gaps = 7/345 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ + ++G++ +RD ++ + + DT K+ K + +
Sbjct: 55 RSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCKKVLEHLMKLKYFKLVWG 114
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
++ +++ Y S+ ++L+ ++ + V + G S ++ +
Sbjct: 115 FYKEILECGYPASLYFFNILMHRFC--KEGEIRVARSVFDAITKWGLRPSVVSFNTLMNG 172
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+LG DE ++ AM +G EPD TYS +I GLCK + + A + DEM + G +P+
Sbjct: 173 YIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPN 232
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LI GHC VD A+ + +M+ ++ AD + LI G + + A L+
Sbjct: 233 GVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLID 292
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
EM K L+P + T+ TLI+ LE A + M ++N + IS
Sbjct: 293 EMRMK-GLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQE 351
Query: 560 GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G DA + L+ LSV P + Y + F +G + LL
Sbjct: 352 GRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLL 396
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G E D+ TY + K ++ A
Sbjct: 158 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGA 217
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 218 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSADLITYN 272
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A+ ++ M+ G +PD ITY+ +I G CK G E A M +
Sbjct: 273 TLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE 332
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ D ++IN F + V
Sbjct: 333 NIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTG 392
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 393 SKLLKEM 399
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 73/181 (40%), Gaps = 37/181 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ N+++EM+ +G + D TY
Sbjct: 267 DLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTT------------------ 308
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L VY + L
Sbjct: 309 --LIDGCCKEG-----------------DLETAFEHRKRMIQENIRLDDVVYTTLISGLC 349
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 350 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVV 409
Query: 445 T 445
T
Sbjct: 410 T 410
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 149/349 (42%), Gaps = 7/349 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N T+N +L R E V + V EM + G D+ ++ I F + + A
Sbjct: 324 GLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRA 383
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ FE M P ++L+ N D+ ++ N+ G + Y+ +
Sbjct: 384 LAYFEKMKGVGLVPDTVIYTILINGYC--RNDDVSGALKMRNEMVERGCVMDVVTYNTLL 441
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + D+A+++ K M G PD T + +I G CK G A ++ + M
Sbjct: 442 NGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLK 501
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ L+ G C E+++A + M+ + +LINGF S V+ A++L
Sbjct: 502 PDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRL 561
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM EK ++P T T+I+ L A L +A + L M + PP + I+ F
Sbjct: 562 WDEMKEK-GIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFV 620
Query: 561 TVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
E+ ++ E P+ Y + F GR EA+ +L+K
Sbjct: 621 KEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHK 669
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 148/327 (45%), Gaps = 10/327 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL +F + + G +T+ Y ++ R++ V + EM + G MD+ TY +
Sbjct: 382 RALAYFEKM-KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTL 440
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ +M++DA +LF+ M++ P + L+ N + + + +E++
Sbjct: 441 LNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGN-----MTKALSLFETM 495
Query: 368 G-NSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
SL V Y+ + K+G ++A+++ M + P I++S +I G C G
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLV 555
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + DEM+E G P + T +I+G+ A + +A M+ + D + L
Sbjct: 556 SEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTL 615
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
IN F+ ++ + A+ L+ M E+ L P T+ ++ R++EA +L M +
Sbjct: 616 INSFVKEENFDRAFFLINNMEER-GLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKA 571
P + I+ + + ++ E +
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRV 701
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/352 (22%), Positives = 146/352 (41%), Gaps = 48/352 (13%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG N T N ++ L + + + + EM+++G D+ TY + + + ++ +
Sbjct: 218 SGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSE 277
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L + M KP + Y+ +
Sbjct: 278 AFGLVDCMAGKGLKPGL-------------------------------------FTYNAL 300
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K G ++ A++++ M G P+ T++ ++ C+ +A V +EM + G
Sbjct: 301 INGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGV 360
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ +++ ++ E+ RAL F KM D + +LING+ V+GA K
Sbjct: 361 VPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALK 420
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+ EM+E+ + T+ TL+ L + L++A L + M ++ FP+ +
Sbjct: 421 MRNEMVERGCVMD-VVTYNTLLNGLCRGKMLDDADELFKEMVERGV--FPDFYTLTTLIH 477
Query: 560 GTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDLLY 604
G +D + KALS+ E P Y + + F G +AK+L Y
Sbjct: 478 GYCKDGN-MTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWY 528
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 118/280 (42%), Gaps = 33/280 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN +L L R + + D + +EM + G D T + + K M A
Sbjct: 429 GCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKA 488
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--------------------------- 353
+ LFE M KP V + L+ + +
Sbjct: 489 LSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILING 548
Query: 354 ---LGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
LGLV FR+ ++ + G + + I + + G +A + M + G PD
Sbjct: 549 FCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPD 608
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
ITY+ +I K F+ A +++ MEE G +P++ T+ ++ G + A +
Sbjct: 609 CITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLH 668
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
KM++K + D LING++S+ + A+++ EM+++
Sbjct: 669 KMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR 708
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 144/357 (40%), Gaps = 46/357 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P + +Y++++ D + M E C ++ TY ++L L + K D
Sbjct: 397 PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDD---- 452
Query: 187 NQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
D + KE+ V TL ++ G D +
Sbjct: 453 ---ADELFKEMVERGVFPDFYTLTTLIHGYCKDGNM------------------------ 485
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---HESVRDFWNVVEEMKKEGYEMD 300
KAL F + S K + +TYN ++ + E ++ W + + +E +
Sbjct: 486 ---TKALSLFETMTLRS-LKPDVVTYNTLMDGFCKVGEMEKAKELW--YDMISREIFPSY 539
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
I I I+ F ++ +A +L++ M + KP++ C+ +++ N L
Sbjct: 540 ISFSILIN-GFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGN--LSKANDF 596
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
N S G Y+ + + K FD A ++ M+ G P+ +TY+ ++ G +
Sbjct: 597 LNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSR 656
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
GR ++A VL +M + G PD T+T LI G+ + + + A +M+++ + D
Sbjct: 657 HGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 4/209 (1%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G +S + + + A+ K+G D A K+ + +G + T + ++ LCK G+ ++
Sbjct: 184 GFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNV 243
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L EMEE G D+ T+ L+ +C V A M K + LING
Sbjct: 244 GVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALING 303
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A ++L EM+ V L P ATF ++ + + EA + M ++ P
Sbjct: 304 LCKEGSYERAKRVLDEML-GVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP 362
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKE 576
+ + S G E +AL+ E
Sbjct: 363 ---DLISFSSIVGVFSRNGELGRALAYFE 388
Score = 47.0 bits (110), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 1/178 (0%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
V+D + R + + E + + ++ GF + ++ + K G + A V ++
Sbjct: 156 VFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDF 215
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++G I ++ T I++ C ++D + ++M EK AD + L+N + + V
Sbjct: 216 VKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLV 275
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A+ LV+ + L+P T+ LI L E A +L M P F
Sbjct: 276 SEAFG-LVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATF 332
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 124/270 (45%), Gaps = 13/270 (4%)
Query: 332 YKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ P VQ ++L+ SI D L+F N+ G + ++ + L K
Sbjct: 219 FPPKVQYYNILINKFCKEGSIR--DAKLIF---NEIRKRGLRPTTVSFNTLINGLCKSRN 273
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DE ++ K M+ PD TYS +I GLCK GR + A + DEM++ G P+ T+T
Sbjct: 274 LDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI G C + +D A+ + +M+ D + + L+NG VN A KL+ EM V
Sbjct: 334 LIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM-RMV 392
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
++P + T+ TLI+ LE AM + + M ++ F IS F G V DA
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452
Query: 566 SEFLKAL-SVKEYPSSAAYLQVFESFFNEG 594
L+ + P A Y V + + +G
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKG 482
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 159/362 (43%), Gaps = 11/362 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
PV F+ + E+ G+ YN ++ + S+RD + E++K G ++
Sbjct: 204 PVTIWTFYSEILEY-GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFN 262
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ K R +++ +L + M + P V S+L+ + D+ ++ ++ +
Sbjct: 263 TLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAE--QLFDEMQ 320
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + + + + R D A M G +PD + Y+ ++ GLCK G
Sbjct: 321 QRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVN 380
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A ++DEM G PD T+T LI G+C +++ A+ M E+ D LI
Sbjct: 381 KARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALI 440
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+GF RV A + L EM+E ++P AT+ +I+ ++ LL+ M+ +
Sbjct: 441 SGFCRDGRVRDAERTLREMVE-AGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGH 499
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + + + K G +++A+ L+A L++ P Y + E G+ A+D
Sbjct: 500 KPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGK---AED 556
Query: 602 LL 603
LL
Sbjct: 557 LL 558
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 96/243 (39%), Gaps = 2/243 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + N IT+ ++ R + N +M G + D+ Y + K +
Sbjct: 320 QQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDV 379
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A KL + M KP + L+ DL + G L +
Sbjct: 380 NKARKLVDEMRMVGMKPDKITYTTLIDGYCK--EGDLESAMEIRKGMNEEGVVLDNVAFT 437
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + GR +AE+ ++ M AG +PD+ TY+ VI G CK G + +L EM+ N
Sbjct: 438 ALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQIN 497
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T+ +L+ G C ++ A + M+ D ++L+ G +
Sbjct: 498 GHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDL 557
Query: 498 YKL 500
KL
Sbjct: 558 LKL 560
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 148/352 (42%), Gaps = 29/352 (8%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSI 170
A FN + K+ RP++ ++ ++ L +L + + + M+E+ Y + TY + I
Sbjct: 242 AKLIFNEI-RKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLI 300
Query: 171 LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL 230
G+ K+ + L Q D M + N T ++ G +I + L
Sbjct: 301 HGLCKEGR----LDVAEQLFDEMQQRGLRPN-GITFTALIDGQCRSRRIDSAMNTYHQML 355
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHS------------GYKHNTITYNGILRVLAR 278
+ + V +L +Y G + VG+ + G K + ITY ++ +
Sbjct: 356 T----MGVKPDLVMYNTLLNGLCK-VGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCK 410
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + + M +EG +D + + F + + DA + M++ KP
Sbjct: 411 EGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDAT 470
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
++++ N +G F++ + + G+ Y+ + L K G+ A +++A
Sbjct: 471 YTMVIDGYCKKGNVKMG--FKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEA 528
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
M N G PD+ITY+ ++ G CK G+ ED +L E G I D +T L+
Sbjct: 529 MLNLGVTPDDITYNILLEGHCKNGKAED---LLKLRNEKGLIVDYAYYTSLV 577
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 111/301 (36%), Gaps = 49/301 (16%)
Query: 337 QDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
Q+C ++R + S D VF A ++ G S V+D + A G +A +
Sbjct: 118 QECQSIIRFLVSRKGKDSAASVF--AAILDTAGTRCSNFVFDALMIAYWDSGFVSDAIQC 175
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV---LDEMEENGCIPDIKTWTILIQG 452
+ ++N+ F+ I + + L K + E+ E G P ++ + ILI
Sbjct: 176 FRLVRNSNFQ---IPFHGCGYLLDKMINSNSPVTIWTFYSEILEYGFPPKVQYYNILINK 232
Query: 453 HCAANEVDRALLCF----------------------------------AKMMEKN-YDAD 477
C + A L F K ME+N D
Sbjct: 233 FCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPD 292
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
VLI+G + R++ A +L EM ++ LRP TF LI+ +RR++ AMN
Sbjct: 293 VFTYSVLIHGLCKEGRLDVAEQLFDEMQQR-GLRPNGITFTALIDGQCRSRRIDSAMNTY 351
Query: 538 RLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNE 593
M P + + K G V A + + + V P Y + + + E
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKE 411
Query: 594 G 594
G
Sbjct: 412 G 412
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 19/352 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TY ++ L + + +++++M+K E D+ Y I ++ + DA
Sbjct: 199 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 258
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF M + +P+V + L+R + + R ++ L + + + +
Sbjct: 259 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYG--------RWSDASRLLSDMIERKINPNVV 310
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +PD TYS +I G C R ++A ++ + M
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C P++ T+ LI+G C A V+ + F +M ++ + + LI G
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A K+ +M+ + P T+ L++ L +LE+A+ + ++K P +
Sbjct: 431 DMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 489
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
++ + K G VED + +LS+K P+ Y + F +G EA L
Sbjct: 490 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 541
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 308 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 367
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ + G+ +FR ++ +GN+++ Y+ + + L
Sbjct: 368 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YNTLIQGL 424
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+K+ K M + G PD ITYS ++ GLCK G+ E A V + ++++ PDI
Sbjct: 425 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 484
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A L E
Sbjct: 485 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 544
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M E L P T+ TLI L
Sbjct: 545 MKEDGTL-PNSGTYNTLIRARL 565
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 29/356 (8%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
Y+ NT+T+N ++ L H + +++ M G + D+ TY + K ++ A+
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGI 379
L + M G + V + ++ ++ + N + L L + NK G + Y+ +
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK----GIRPNVVTYNSL 280
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R L GR+ +A +++ M P+ +T+S +I K G+ +A + DEM +
Sbjct: 281 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 340
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T++ LI G C + +D A F M+ K+ + + LI GF KRV +
Sbjct: 341 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 400
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY---- 555
L EM ++ L T+ TLI+ L A + A + + M PP + Y
Sbjct: 401 LFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---DIITYSILL 456
Query: 556 --ISKFGTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+G +E KAL V EY P Y + E G+ + DL
Sbjct: 457 DGLCKYGKLE------KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 506
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 34/314 (10%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
++ +YN ++ R + V+ +M K GYE DI T + + + + +AV L
Sbjct: 97 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 156
Query: 324 FEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ M Y+P+ + +L+ R ++ PDL V N
Sbjct: 157 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 216
Query: 367 LGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ SL K +Y I AL ++A + M N G P+ +T
Sbjct: 217 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 276
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I LC GR+ DA +L +M E P++ T++ LI ++ A + +M+
Sbjct: 277 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 336
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+++ D D LINGF R++ A + MI K P T+ TLI+ A+R+
Sbjct: 337 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRV 395
Query: 531 EEAMNLLRLMKKQN 544
EE M L R M ++
Sbjct: 396 EEGMELFREMSQRG 409
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + + LL +I+ +N DL V + + +
Sbjct: 34 KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL--VISLGERMQ 91
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+L S Y+ + + + A ++ M G+EPD +T S ++ G C R
Sbjct: 92 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 151
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M P+ T+ LI G N+ A+ +M+ + D ++
Sbjct: 152 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 211
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + ++ A LL +M EK ++ + T+I+ L + + +A+NL M +
Sbjct: 212 NGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 270
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + ++ + +G DAS L + K P+ + + ++F EG+ EA+
Sbjct: 271 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 330
Query: 602 L 602
L
Sbjct: 331 L 331
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN +++ + + V + + EM + G + TY + + + + A K+F
Sbjct: 378 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P + S+LL + + LV +E L S + Y+ +
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV-----FEYLQKSKMEPDIYTYNIMIE 492
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +P+ I Y+ +I G C+ G E+A + EM+E+G +P
Sbjct: 493 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 552
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ T+ LI+ + + +M + DA + ++IN L R+ +Y
Sbjct: 553 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 608
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/452 (21%), Positives = 180/452 (39%), Gaps = 89/452 (19%)
Query: 113 SAFFNWVCDKKQF---------------RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
+ NW+C +F RP Y+ ++ L L++M+E
Sbjct: 172 TTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEE 231
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDW 215
C TY +I+ +K ++ ++ AL+ F VK I+ D +L+ + S W
Sbjct: 232 AGCQPNVVTYSTIIDSHRKDRRVNE--ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQW 289
Query: 216 DDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
+ + +L ++ L I P + +T+N ++
Sbjct: 290 KEA--------------SALLNEMRSLNIMP------------------DIVTFNVLVDT 317
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
+ + V + V++ M + G E D+ TY + + + +A KLF+ M+ KP
Sbjct: 318 ICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPD 377
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
V ++L+ N Y K+ R DEA+++
Sbjct: 378 VFSYNILI------------------NGY-------------------CKVKRIDEAKQL 400
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M + G P+N++Y+ +I GLC+ G +A N+ M NG +P++ T++IL+ G C
Sbjct: 401 FNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCK 460
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+A F M + + ++LI+ + A KL E+ K L+P
Sbjct: 461 QGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVK-GLQPNAQ 519
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ T+I L L+EA+ R M++ PP
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 551
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 127/287 (44%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+ ++ L + + ++M G D+ TY I K A
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAA 222
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M + +P+V S ++ S + L + + + G S Y+ +
Sbjct: 223 AGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL--DIFSYMKVKGISPDIFTYNSLI 280
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L ++ EA ++ M++ PD +T++ ++ +CK G+ +A VL M E G
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T++ L+ G+ +EV A F M+ K D ++LING+ KR++ A +L
Sbjct: 341 PDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQL 400
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EMI + L P ++ TLI L L EA NL + M P
Sbjct: 401 FNEMIHQ-GLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLP 446
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 100/214 (46%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ S+L+ S + DL F V K LG + + + L K+G+F +A
Sbjct: 131 PNIYTLSILINCFSHLQRVDLA--FSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAM 188
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M G PD TY+ +I GLCK G A +L +MEE GC P++ T++ +I H
Sbjct: 189 ELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSH 248
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
V+ AL F+ M K D + LI G + + A LL EM + + P
Sbjct: 249 RKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEM-RSLNIMPD 307
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
TF L++ + ++ EA +L+ M + P
Sbjct: 308 IVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEP 341
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 143/341 (41%), Gaps = 7/341 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N T + ++ + + V ++V+ ++ K G + I T+ + K
Sbjct: 125 ELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKF 184
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A++LF+ M+ +P V + ++ + I + + K E G + Y
Sbjct: 185 AQAMELFDDMVARGCRPDVYTYTTIINGLCKIG--ETAAAAGLLKKMEEAGCQPNVVTYS 242
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + K R +EA + MK G PD TY+ +I GLC ++++A +L+EM
Sbjct: 243 TIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSL 302
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+PDI T+ +L+ C +V A M E + D L+ G+ + V A
Sbjct: 303 NIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEA 362
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
KL MI K +P ++ LI +R++EA L M Q P + +
Sbjct: 363 RKLFDAMITK-GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIH 421
Query: 555 YISKFGTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEG 594
+ + G++ +A K + P+ Y + + F +G
Sbjct: 422 GLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 382 ALTKLGRF-DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A+ K+G++ D + K M+ AG P+ T S +I R + A +VL ++ + G
Sbjct: 106 AIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQ 165
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P I T+T LI C + +A+ F M+ + D +ING A L
Sbjct: 166 PTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGL 225
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYIS 557
L +M E+ +P T+ T+I+ RR+ EA+++ MK + P +Q +
Sbjct: 226 LKKM-EEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLC 284
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F ++AS L + S+ P + + ++ EG+ EA+ +L
Sbjct: 285 NFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVL 331
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 83/191 (43%), Gaps = 10/191 (5%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G N ++YN ++ L + S+R+ N+ + M G ++ TY + F K
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFG 465
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES----LGNSLSKS 374
A +LF M KP++ ++L+ ++ N R A K S G +
Sbjct: 466 KAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN------LRDARKLFSELFVKGLQPNAQ 519
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y I L K G DEA + + M+ G PD I+Y+ +I G A ++ EM
Sbjct: 520 IYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEM 579
Query: 435 EENGCIPDIKT 445
+ G I D+ T
Sbjct: 580 RDKGFIADVGT 590
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 36 ASAVFAVILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 95
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ D+ + V +
Sbjct: 96 LEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFC--KERDIRVAQSVFDAITKW 153
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD AL + +M+ ++ D + LI G
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ LI+ L+ A + M ++N
Sbjct: 274 LCKKGDLKQAHDLIDEMSMK-GLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRL 332
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 333 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 392
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 2/243 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL L +SL L Y+ +
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLI--TYNTLI 271
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 272 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIR 331
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ DA ++IN F + V KL
Sbjct: 332 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 391
Query: 501 LVE 503
L E
Sbjct: 392 LKE 394
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 145/318 (45%), Gaps = 8/318 (2%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
++M EG+ D+ TY + K A++L M+ +P+V + ++ S+
Sbjct: 122 DKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCK- 180
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+ + F + ++ + G S Y+ + AL L + ++ M ++ PD +
Sbjct: 181 -DRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVV 239
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEM-EENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+++ V+ LCK G+ +A +V+D+M + GC+P++ ++ LI G+C +D+A+ F +
Sbjct: 240 SFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGE 299
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M + D LI+G +R+ A L EM+ ++ P T++ L++ L R
Sbjct: 300 MCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI-PNLVTYRILLDYLCKNR 358
Query: 529 RLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYL 584
L EAM LL+ ++ N P + + + G +E A + LS K P Y
Sbjct: 359 YLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYS 418
Query: 585 QVFESFFNEGRHYEAKDL 602
+ G EA L
Sbjct: 419 IMINGLCRRGLLDEASKL 436
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 112/277 (40%), Gaps = 4/277 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N YN I+ L + V + +N+ EM +G DI TY + + L
Sbjct: 167 NVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLL 226
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRAL 383
M+D P V + ++ ++ + V +K G + + Y+ +
Sbjct: 227 NEMVDSKIMPDVVSFNTVVDALCK--EGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K+ R D+A + M PD +TYS +I GLC R +DA + EM IP++
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ IL+ C + A+ + N D D + ++ I+G + A L
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ K L+P T+ +I L L+EA L R M
Sbjct: 405 LSSK-GLQPDVWTYSIMINGLCRRGLLDEASKLFREM 440
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 176/427 (41%), Gaps = 50/427 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
FRP Y ++ L + L M + +C Y +I+ L K ++ ++
Sbjct: 129 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTE-- 186
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + K I+ D +L+ + +W V T+L E+
Sbjct: 187 AFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKH-----------------VATLLNEM 229
Query: 243 ---RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+I P + +++N ++ L + V + +VV++M + G M
Sbjct: 230 VDSKIMP------------------DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCM 271
Query: 300 -DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLV 357
++ +Y + + K + ++ A+ LF M P S L+ + + D +
Sbjct: 272 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 331
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
F + N ++ Y + L K EA ++KA++ + +PD + I G
Sbjct: 332 FHEMVACSQIPNLVT---YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDG 388
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+C+AG E A ++ + G PD+ T++I+I G C +D A F +M E +
Sbjct: 389 MCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLN 448
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM-NL 536
+ + + GFL + A +LL EM+ R A+ TL K+L L++++ +
Sbjct: 449 GCIYNTITRGFLRNNETSRAIQLLQEMV--ARGFSADASTMTLFVKMLSDDGLDQSLKQI 506
Query: 537 LRLMKKQ 543
LR KQ
Sbjct: 507 LRDFCKQ 513
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 6/275 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ +L+ S +N +G + +K G Y + L K+G A
Sbjct: 94 PNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAI 153
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+++ +M +P+ Y+ +I LCK + +A N+ EM G PDI T+ LI
Sbjct: 154 RLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHAL 213
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C E +M++ D + +++ + +V A+ ++ +MI++ P
Sbjct: 214 CNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPN 273
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE---DA-SEFL 569
++ TLI +R+++AM L M +Q P + I VE DA + F
Sbjct: 274 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 333
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHY-EAKDLL 603
+ ++ + P+ Y ++ + + R+ EA LL
Sbjct: 334 EMVACSQIPNLVTY-RILLDYLCKNRYLAEAMALL 367
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 90/206 (43%), Gaps = 7/206 (3%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN--EVDRAL 463
P + +++++ + K ++ +M+ G P+I T ILI C N ++ AL
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRGKIGEAL 118
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
F KM+ + + D LING + A +LL M++K +P + T+I+
Sbjct: 119 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYNTIIDS 177
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED----ASEFLKALSVKEYPS 579
L R++ EA NL M + P + I + + A+ + + K P
Sbjct: 178 LCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPD 237
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
++ V ++ EG+ EA D++ K
Sbjct: 238 VVSFNTVVDALCKEGKVTEAHDVVDK 263
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 147/315 (46%), Gaps = 6/315 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T+N ++R L + + ++ ++ EG++ D+ TY + K A
Sbjct: 215 GCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAA 274
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M+ +P+V + ++ S+ + + F + ++ + G S Y+ +
Sbjct: 275 IRLLRSMVQKNCRPNVIAYNTIIDSLCK--DRQVTEAFNLFSEMITKGISPDIFTYNSLI 332
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M N+ P+ + +S V+ LCK G A +V+D M + G
Sbjct: 333 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 392
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T L+ GHC +E+D A+ F M+ K + ++LING+ +R++ A L
Sbjct: 393 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 452
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L +M + L T+ TLI L RL+ A+ L M P + + Y+
Sbjct: 453 LEQMSLQ-GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLC 511
Query: 558 KFGTVEDASEFLKAL 572
K + +A LKA+
Sbjct: 512 KNHHLAEAMVLLKAI 526
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/458 (22%), Positives = 186/458 (40%), Gaps = 87/458 (18%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P Y ++ L + LR M + +C Y +I+ L K ++ ++
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTE-- 308
Query: 185 ALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F + + K I+ D +L+ + +W V T+L E+
Sbjct: 309 AFNLFSEMITKGISPDIFTYNSLIHALCNLCEW-----------------KHVTTLLNEM 351
Query: 243 ---RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+I P N + ++ ++ L + + +VV+ M K G E
Sbjct: 352 VNSKIMP------------------NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLV 357
D+ TY + M++AVK+F+ M+ P+V+ ++L+ I D +GL+
Sbjct: 394 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 453
Query: 358 FRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD-------------------------- 390
++ SL ++ +V Y+ + L +GR
Sbjct: 454 EQM-----SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 508
Query: 391 ---------EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
EA ++KA++ + + D + Y+ I G+C+AG E A ++ + G P
Sbjct: 509 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 568
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D++T+ I+I G C +D A F KM E D + + +I GFL GA +LL
Sbjct: 569 DVRTYNIMIHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLL 628
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
EM+ + T TLI ++L L+++ LRL
Sbjct: 629 QEMLAEGFSADVSTT--TLIVEMLSDDGLDQSFERLRL 664
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P V ++L+ S + LG F V K LG + ++ + R L G+ EA
Sbjct: 183 PDVYTLNILINSFCHLRR--LGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEAL 240
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ GF+PD +TY ++ GLCK G A +L M + C P++ + +I
Sbjct: 241 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 300
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F++M+ K D + LI+ + LL EM+ ++ P
Sbjct: 301 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS-KIMPN 359
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F T+++ L + A +++ +M K+ P
Sbjct: 360 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 393
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 67/159 (42%), Gaps = 1/159 (0%)
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
D+A M + P + +++++ + K + ++ +M+ G PD+ T I
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
LI C + A AK+++ D + LI G + ++ A L + I +
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGE- 249
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+P T+ TL+ L A+ LLR M ++N P
Sbjct: 250 GFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRP 288
>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Brachypodium distachyon]
Length = 877
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 154/354 (43%), Gaps = 10/354 (2%)
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
RW +G N + YN ++ R V ++ EM+ +G + TY + +
Sbjct: 285 RW---GAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGR 341
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+E L M + P+VQ + ++ ++ + LV V + + G
Sbjct: 342 KGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALV--VLKQMFAGGCDPDA 399
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ + L + GR EAE++++ P+ +Y+ +I G C G A N+L E
Sbjct: 400 ITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVE 459
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M E G PD+ T+ LI G A +V ALL KM + DA++ +VLI+G +K
Sbjct: 460 MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKM 519
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPE 550
+ A L+ EM+E+ + P + + TLI+ + L+EA + M+++ P
Sbjct: 520 LPAARNLIEEMLEQ-NVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYN 578
Query: 551 PFVQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
++ +FG + +A E + + V P Y + + +G A LL
Sbjct: 579 AMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLL 632
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 124/314 (39%), Gaps = 16/314 (5%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ L + + + N++EEM ++ D Y + F + +++A K+FEFM
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P V + +++ + + +G + Y + K G
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGM--MNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGN 624
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
A ++ M +P+ + YS +I G CK G + A + ME G P++ T+TI
Sbjct: 625 ISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTI 684
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS----------QKRVN--- 495
LI ++V RA + F M+ + L L+ G + VN
Sbjct: 685 LIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHG 744
Query: 496 -GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
GA + + R P + + +I L L EA++L M + Y P F+
Sbjct: 745 KGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLS 804
Query: 555 YISKFGTVEDASEF 568
+ F +V + E+
Sbjct: 805 LLYGFCSVGKSREW 818
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 130/318 (40%), Gaps = 6/318 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G + IT++ ++ L + V++ ++ E + ++ +Y + F +
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L MM+ + P V L+ + L+ R K + ++Y+ +
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVR--EKMAARQLLPDANIYNVL 510
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L K A +++ M PD Y+ +I G + ++A + + ME+ G
Sbjct: 511 ISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGI 570
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ + +I+G+C ++ A+ C + M + D LI G+ Q ++GA
Sbjct: 571 HPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALS 630
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LL +M+++ R +P + +LI + A L M+ Q FP + Y
Sbjct: 631 LLCDMMKR-RCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGL--FPN-VITYTILI 686
Query: 560 GTVEDASEFLKALSVKEY 577
G++ + ++A EY
Sbjct: 687 GSLFKKDKVVRAAMYFEY 704
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TYN ++R L ++ +++ +M+ G ++ TY + F + ++ A
Sbjct: 145 GVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGA 204
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L M+DG KP++ + S+ N + K+
Sbjct: 205 ERLVGMMLDGGLKPNLV-------------------------TFNSMVNGMCKA------ 233
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G+ ++A K+ M G PD ++Y+ ++ G CKAG +A +V EM + G +
Sbjct: 234 ------GKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIM 287
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI C A ++ A+ +M E+ + LI+GF + ++ A L
Sbjct: 288 PDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDAL-L 346
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
V + + R++P + LI R++EA LL M+ + P + IS +
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 251 GFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
G R VG G K N +T+N ++ + + + D V +EM +EG D +Y +
Sbjct: 203 GAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLV 262
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +A+ +F M P V + L+ + N L + + G
Sbjct: 263 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN--LEWAVTLVRQMRERG 320
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+++ + + K G D+A ++ M+ +P + Y+ +I G C GR ++A
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEAR 380
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L EME G PD+ T++ +I +C + A +M+EK DA LI
Sbjct: 381 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 440
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+KR++ A+ L MI K+ L+P + T+ +LI+ +E A++L M K P
Sbjct: 441 CEEKRLSDAHVLFKNMI-KLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLP 498
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A + F+ M+ P+V ++L+R++ + L + G + Y
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL--SILRDMRGAGCGPNVVTY 188
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A + G D AE+++ M + G +P+ +T++ ++ G+CKAG+ EDA V DEM
Sbjct: 189 NTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMR 248
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD ++ L+ G+C A AL FA+M +K D LI+ +
Sbjct: 249 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEW 308
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L+ +M E+ L+ + TF LI+ L++A+ +R M++ P + I
Sbjct: 309 AVTLVRQMRER-GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+ + G +++A E L + K P Y + ++
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 405
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 144/355 (40%), Gaps = 11/355 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +TYN ++ R V +V M G + ++ T+ + K MED
Sbjct: 179 AGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMED 238
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A K+F+ MM P + L+ + ++ L + + K G +
Sbjct: 239 ARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQK----GIMPDVVTFT 294
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K G + A +++ M+ G + + +T++ +I G CK G +DA + M +
Sbjct: 295 SLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQC 354
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P + + LI G+C +D A +M K D +I+ + + A
Sbjct: 355 RIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSA 414
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI- 556
++L +M+EK L P T+ +LI L +RL +A L + M K P + I
Sbjct: 415 FELNQQMLEKGVL-PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLID 473
Query: 557 --SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
K G VE A S K + P Y + R EA+ LL+K H
Sbjct: 474 GHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYH 528
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 125/307 (40%), Gaps = 18/307 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + +TY+ I+ ++ + + ++M ++G D TY + R + + +
Sbjct: 387 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRL 446
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA LF+ M+ +P + L+ N + L +K G Y
Sbjct: 447 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLH--DKMVKAGVLPDVVTYS 504
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF---------------GLCKAG 422
+ L+K R EA++++ + + P N Y ++ G C G
Sbjct: 505 VLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 564
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A V M + D +++LI GHC A V +AL +M+++ + ++
Sbjct: 565 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTI 624
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LI G V A +++ +++ L +A+ K LI+ L ++ +++L M K
Sbjct: 625 SLIRGLFENGMVVEADQVIQQLLNCCSLADAEAS-KALIDLNLNEGNVDAVLDVLHGMAK 683
Query: 543 QNYPPFP 549
P P
Sbjct: 684 DGLLPSP 690
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
V+++A +VAK + V++ S + L+ + +S V VL R + FF
Sbjct: 65 VRDVA--DVAKNISKVLMSSP-QLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFF 121
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+W + Y+H+ Y+ ++ A+ + W+++ M+K+ ++++T+ + R++ +
Sbjct: 122 QWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYAR 180
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS- 372
+ +++A+ F M P++ + LL ++ N V + +E++ + +
Sbjct: 181 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-----VRKAQEVFENMRDRFTP 235
Query: 373 -KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + K +A ++ + M +AG PD +TYS ++ LCKAGR ++A ++
Sbjct: 236 DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV 295
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+ + C P +++L+ + N ++ A+ F +M AD + + LI F
Sbjct: 296 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 355
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
R+ Y++L EM K + P + ++ L+ +EA ++ R M K P
Sbjct: 356 NRMKNVYRVLKEMKSK-GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP 409
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 139/351 (39%), Gaps = 54/351 (15%)
Query: 232 DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ F + + K R V + V E N + +NG+L L + ++VR V E
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M+ + + D TY + + K + A ++F M+D P + S+++ +
Sbjct: 229 MR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR 287
Query: 352 PD--LGLVFRVANKYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
D LG+V S+ S+ K +Y + R +EA M+ +G +
Sbjct: 288 VDEALGIV-------RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENG---------------------------- 438
D ++ +I CKA R ++ VL EM+ G
Sbjct: 341 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF 400
Query: 439 ------CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
C PD T+T++I+ C E++ A + M +K VLING ++
Sbjct: 401 RKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 460
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
A LL EMIE + +RP TF L + L+ R L E MN+L
Sbjct: 461 TTQKACVLLEEMIE-MGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVL 510
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 170/397 (42%), Gaps = 16/397 (4%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L++ L++ +++ E V VL + N FF W ++ + S Y +M+ +
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
K W + M++ + ET+ ++ +A+K + A+ F+ ++ +
Sbjct: 147 IRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYARAQKVDE--AIYAFNVMEKYDLPPNL 203
Query: 202 VA-KTLVDVVLGSDWDDKIGKKLEDMKIELS-DNFVLTVL-----KELRIYPVKALGFFR 254
VA L+ + S K + E+M+ + D+ ++L KE + P KA FR
Sbjct: 204 VAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNL-P-KAREVFR 261
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ + +G + +TY+ ++ +L + V + +V M + Y + +
Sbjct: 262 EMID-AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 320
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+E+AV F M K V + L+ + N + V+RV + +S G + +
Sbjct: 321 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR--MKNVYRVLKEMKSKGVTPNSK 378
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ I R L + G DEA + + M EPD TY+ VI C+ E A V M
Sbjct: 379 SCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYM 437
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ G P + T+++LI G C +A + +M+E
Sbjct: 438 RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 474
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T+ V+ +A + ++A + ME+ P++ + L+ C + V +A F M
Sbjct: 170 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 229
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ + D+ +L+ G+ + + A ++ EMI+ P T+ +++ L A R
Sbjct: 230 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMID-AGCHPDIVTYSIMVDILCKAGR 287
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
++EA+ ++R M P + + +GT E + E A + VF S
Sbjct: 288 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 347
Query: 590 FFN 592
Sbjct: 348 LIG 350
>gi|255544107|ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548127|gb|EEF49619.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1128
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 172/393 (43%), Gaps = 28/393 (7%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + +L ++ ++ + V VLK + P A FF W G+ GY+HN +YN
Sbjct: 545 WGPPVVAELRKLR-RVTPDLVSEVLK-VENDPHLASQFFHWAGKQKGYRHNFASYNAYAY 602
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF-RMMEDAVK------LFEFM 327
L R R + E M +G +QF+ RM DA + +++ M
Sbjct: 603 CLNRSSFFRAADQLPELMDSQGKP-------PTEKQFEILIRMHSDANRGLRVYHVYQKM 655
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
KP + ++ ++ + DL LV V + ++S G Y + + L K G
Sbjct: 656 KKFGVKPRAFLYNRIMDALIKTAHLDLALV--VYDDFKSDGLVEDSVTYMILIKGLCKFG 713
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R DE ++ + MK G PD + Y+ V+ GLCK GR + + EM+EN + D +
Sbjct: 714 RIDEMMEVWEEMKRDGVNPDVMAYATVVTGLCKGGRVAEGYELFKEMKENKVLIDRAIYG 773
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+LI+ ++ A +++ Y AD + + LI G + KRV+ A KL M+++
Sbjct: 774 VLIEAFVKDGKIGSACDLLQGLVDSGYRADLGIYNSLIEGLCNVKRVDKARKLFQIMVQE 833
Query: 508 VRLRPWQATFKTLIEKLLG---ARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGT 561
+ FKT+ L+ +R++E LL M++ + + F + +
Sbjct: 834 GL----ELDFKTVNPMLVSYAEMKRMDEFCKLLVQMERLGFSVMDDISKLFSFLVRREEI 889
Query: 562 VEDASEFLKALSVKEYPSSAAYLQVFESFFNEG 594
+ A E + L VK Y S Y + E+ G
Sbjct: 890 ITLALEVFEELKVKGYISVLIYNTLMEALLKVG 922
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SGY+ + YN ++ L + V + + M +EG E+D T + + + + M++
Sbjct: 798 SGYRADLGIYNSLIEGLCNVKRVDKARKLFQIMVQEGLELDFKTVNPMLVSYAEMKRMDE 857
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
KL M + SV D L S + L V + + G +S +Y+ +
Sbjct: 858 FCKLLVQMERLGF--SVMDDISKLFSFLVRREEIITLALEVFEELKVKG-YISVLIYNTL 914
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K+G +A + MK+ EPD+ TYS + + G ++AC +++ E
Sbjct: 915 MEALLKVGEVRKALSLFSEMKDLNCEPDSNTYSIAVICFVEDGNIQEACVCHNKIIEMSS 974
Query: 440 IPDIKTWTILIQGHCAANEVDRALL 464
+P + + L +G C E+D A++
Sbjct: 975 VPSVAAYCSLTKGLCDIGEIDEAMM 999
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 61/311 (19%), Positives = 127/311 (40%), Gaps = 14/311 (4%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
Y ++ + + ++++ + GY D+ Y + + ++ A KLF+ M+
Sbjct: 772 YGVLIEAFVKDGKIGSACDLLQGLVDSGYRADLGIYNSLIEGLCNVKRVDKARKLFQIMV 831
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
+ + + +L S + + D V + E LG SV D I + + L R
Sbjct: 832 QEGLELDFKTVNPMLVSYAEMKRMDEFCKLLV--QMERLG----FSVMDDISKLFSFLVR 885
Query: 389 FDE----AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+E A ++ + +K G+ + Y+ ++ L K G A ++ EM++ C PD
Sbjct: 886 REEIITLALEVFEELKVKGY-ISVLIYNTLMEALLKVGEVRKALSLFSEMKDLNCEPDSN 944
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++I + + A +C K++E + L G ++ A L+ +
Sbjct: 945 TYSIAVICFVEDGNIQEACVCHNKIIEMSSVPSVAAYCSLTKGLCDIGEIDEAMMLVRDC 1004
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
+ V P + + + + + E+ + +L M +N PP + + K GT
Sbjct: 1005 LGNVTSGPMEFKYTLTVLHVCRSGDAEKVIEVLNEMMHENCPPNEVILSAIISGMCKHGT 1064
Query: 562 VEDASEFLKAL 572
+E+A + L
Sbjct: 1065 LEEARKVFTNL 1075
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 7/184 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ + YN ++ L + VR ++ EMK E D +TY F + +++A
Sbjct: 907 SVLIYNTLMEALLKVGEVRKALSLFSEMKDLNCEPDSNTYSIAVICFVEDGNIQEACVCH 966
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+++ PSV L + + I D ++ + LGN S + +
Sbjct: 967 NKIIEMSSVPSVAAYCSLTKGLCDIGEIDEAMML----VRDCLGNVTSGPMEFKYTLTVL 1022
Query: 385 KLGRFDEAEKMMKAMKNAGFE---PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ R +AEK+++ + E P+ + S +I G+CK G E+A V + E +
Sbjct: 1023 HVCRSGDAEKVIEVLNEMMHENCPPNEVILSAIISGMCKHGTLEEARKVFTNLRERKLLT 1082
Query: 442 DIKT 445
+ KT
Sbjct: 1083 EAKT 1086
>gi|125537003|gb|EAY83491.1| hypothetical protein OsI_38705 [Oryza sativa Indica Group]
Length = 696
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 123/533 (23%), Positives = 222/533 (41%), Gaps = 97/533 (18%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDL 183
RPS+ VY+ ++ V ++ ++ ++M D C + TY S++ GV ++ D
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRG--IVDE 241
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
A +V+++ + + + + D G+ E ++ L +KE
Sbjct: 242 AVR------LVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRM-------LDKMKEKG 288
Query: 244 IYPVKAL------GFFR-------------WVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ P +A G FR W+G H H + + +L L++ + ++
Sbjct: 289 VAPSEATYRTLVHGVFRCLERDKAYRMLSDWLG-HETSLHPSACHT-MLYCLSKKDMAKE 346
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ M GY +D + + K + D +L + + P ++++
Sbjct: 347 AVEFAKRMSARGYLLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIK 406
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKA 398
S+ + N F AN Y LG+ + K + Y+ + K G D+AE+++K
Sbjct: 407 SLLNCKN------FSKANHY--LGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKE 458
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M++ GF P+ +T++ +I G K G +A VL + E+G +PDI T+T LI G C ++
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQ 518
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEKV--------- 508
+D A +CF +M E +A +VL++ S VN A LL +M I+ V
Sbjct: 519 LDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNA 578
Query: 509 ------RLR------------------PWQATFKTLIEKLLGARRLEEAMNLLRLMKK-- 542
R+R P T+ +LI+ L RR+ +A +L ++
Sbjct: 579 LILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638
Query: 543 ------QNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
Q+Y P V ++K G +A E + + SS Q ES
Sbjct: 639 CSTSNNQSY----WPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIES 687
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 7/231 (3%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S +VY+ + A + G D A + M G PD TY+ ++ G+C+ G ++
Sbjct: 182 LGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDE 241
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +ME G P++ T+T+L+ G C A V+ A KM EK L++
Sbjct: 242 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 487 GFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G + AY++L + + + L P + T++ L +EA+ + M + Y
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHP--SACHTMLYCLSKKDMAKEAVEFAKRMSARGY 359
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFN 592
F +S K V D E L + + P Y+ V +S N
Sbjct: 360 LLDSTAFGIVMSCSLKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLN 410
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ + G +S+ + + + +LG A ++ M G P Y+ +I
Sbjct: 139 RLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAAS 198
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+AG + A +M +GC PD T+ L+ G C VD A+ +M + +
Sbjct: 199 VRAGAVDTAYLRFQQMPADGCRPDRFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNV 258
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+L++GF + RV A+++L +M EK + P +AT++TL+ + ++A +L
Sbjct: 259 FTYTMLVDGFCNAGRVEEAFRMLDKMKEK-GVAPSEATYRTLVHGVFRCLERDKAYRMLS 317
Query: 539 ---LMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY 577
+ +P + +SK ++A EF K +S + Y
Sbjct: 318 DWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFAKRMSARGY 359
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L+++ + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 431 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVG 489
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +++EM ++G + + TY ++ + + + +A+ +F M + KP
Sbjct: 490 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 549
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + ++ G S Y I L K G A
Sbjct: 550 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 605
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
K+ M + G P+ +TY+ ++ KA +++A + +M+ G PD T++I+++
Sbjct: 606 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 665
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC E A+ F +M +KN+ D + +L++ + V A++ M+ L
Sbjct: 666 LGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGL 722
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L ++ EA LL+ M
Sbjct: 723 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 752
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 93/205 (45%), Gaps = 5/205 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +A NV ++M+E GC PD
Sbjct: 491 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 550
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M D V+IN + A+KL
Sbjct: 551 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 610
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
EM+++ P T+ +++ AR + A+ L R M+ + P + ++ +
Sbjct: 611 EMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 669
Query: 560 GTVEDASEFLKALSVKEY-PSSAAY 583
G +E+A + K + P Y
Sbjct: 670 GYLEEAEAVFTEMQQKNWIPDEPVY 694
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 134/337 (39%), Gaps = 55/337 (16%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR----------- 126
W E L+ L ++ VL+++ ND A FF W+ + F+
Sbjct: 431 WGPAAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVG 489
Query: 127 ------------------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
P++ Y+ ++ + + L + +M+E C
Sbjct: 490 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 549
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ TY +++ + KA A++ + ++ D +++ LG K
Sbjct: 550 DRVTYCTLIDIHAKAGFLD--IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 607
Query: 223 LEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
L ++ ++ N ++ + + R Y AL +R + +++G++ + +TY+ ++ V
Sbjct: 608 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ-NALKLYRDM-QNAGFEPDKVTYSIVMEV 665
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + V EM+++ + D Y + + K +E A + ++ M+ +P+
Sbjct: 666 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 725
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V C+ LL + +N ++A YE L N L+
Sbjct: 726 VPTCNSLLSTFLRVN--------KIAEAYELLQNMLA 754
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 138/302 (45%), Gaps = 14/302 (4%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+++L FF W G+ + YN ++ + + W++++ MK G + + T+
Sbjct: 124 LQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDLMKSRGVRITVSTFSV 183
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ R++ + + +AV F M D KP S+++ S+ +F ++S
Sbjct: 184 LVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRRASEAELF-----FDS 238
Query: 367 LGNSLSKS--VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L + VY + + G +AE++ MK AG +P+ TYS VI LC+ G+
Sbjct: 239 LKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQI 298
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A +V EM + GC P+ T+ L++ H A ++ L + +M AD + L
Sbjct: 299 TRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFL 358
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL------IEKLLGARRLEEAMNLLR 538
I + ++ A K+L M++K + P +TF ++ + + GA R+ M L+
Sbjct: 359 IESHCKDENLDEAVKVLDTMVKK-GVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELK 417
Query: 539 LM 540
M
Sbjct: 418 CM 419
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/284 (21%), Positives = 128/284 (45%), Gaps = 2/284 (0%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ + I Y ++ R + V +MK+ G + ++ TY + + + A
Sbjct: 243 FEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAH 302
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+F M+D P+ + L+R + V +V N+ + LG + Y+ +
Sbjct: 303 DVFSEMIDAGCDPNAVTFNSLMRV--HVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIE 360
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K DEA K++ M G P+ T++ + + + A + +M+E C+P
Sbjct: 361 SHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMP 420
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T+ IL++ + +D L +M E + + + +LI F + N AY L+
Sbjct: 421 NTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLM 480
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
EM+E+ L+P + ++T++E L A +L++ L+ M + +
Sbjct: 481 KEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGF 524
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 153/339 (45%), Gaps = 7/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN +LR L +++EEM G +I T+ + + + E
Sbjct: 212 GCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERV 271
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ M + P V+ + ++ + L + + N+ S G S + Y+ +
Sbjct: 272 HEVHAQMAEHGCAPDVRMYATIIDGVC--KEERLEVARGILNRMPSYGLSPNVVCYNTLL 329
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L R++EAE ++ M + D++T++ ++ LC+ G + VL++M E+GC+
Sbjct: 330 KGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCM 389
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T +I G C +D A++ M + +++ G S +R A +L
Sbjct: 390 PDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEEL 449
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+ +MI++ P TF TLI L +E+A+ LL+ M P + I G
Sbjct: 450 MSQMIQQ-GCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 508
Query: 561 TVEDASEFLKALSV----KEYPSSAAYLQVFESFFNEGR 595
+ E L+ L+V P++ Y + + EGR
Sbjct: 509 KAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGR 547
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 174/449 (38%), Gaps = 92/449 (20%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY---IKISRQFQKFRMMEDAV 321
N TY ++R L + D V+++M + G Y ++ + + FR AV
Sbjct: 110 NAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFR---GAV 166
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ + V +C+L+L+++ P V + + S G Y+ + R
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCD-QGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLR 225
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L R+ + +M+ M AG P+ +T+S +I LC+ G FE V +M E+GC P
Sbjct: 226 GLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAP 285
Query: 442 DIKTWTILIQGHCAAN--EVDRALL-------------CFAKMME--------------- 471
D++ + +I G C EV R +L C+ +++
Sbjct: 286 DVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLL 345
Query: 472 -KNYDADADLLDVLIN---GFLSQKRVNGAYKLLVEMIEKV---RLRPWQATFKTLIEKL 524
+ +D D L DV N FL Q NG ++E++E++ P T+ T+I
Sbjct: 346 AEMFDKDCPLDDVTFNILVDFLCQ---NGLVDRVIEVLEQMLEHGCMPDVITYTTVINGF 402
Query: 525 LGARRLEEAMNLLRLMK-----------------------------------KQNYPPFP 549
++EA+ LLR M +Q PP P
Sbjct: 403 CKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNP 462
Query: 550 EPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL-- 603
F + ++ K G VE A E LK + V P +Y V + G EA +LL
Sbjct: 463 VTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNV 522
Query: 604 ----YKCPHHIRQDSKISLLFGSAKSNKV 628
P+ I S S L G + NKV
Sbjct: 523 MVKKGMSPNTIIYSSIASALSGEGRINKV 551
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 131/290 (45%), Gaps = 7/290 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T++ ++ L R+ V +M + G D+ Y I K +E
Sbjct: 246 AGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEV 305
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYD 377
A + M P+V + LL+ + S + GL+ + +K L + + D
Sbjct: 306 ARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
L + G D ++++ M G PD ITY+ VI G CK G ++A +L M
Sbjct: 366 ----FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAAC 421
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+ ++TI+++G C+A A ++M+++ + + LIN + V A
Sbjct: 422 GCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQA 481
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+LL +M+ P ++ T+I+ L A +EA+ LL +M K+ P
Sbjct: 482 IELLKQMLVN-GCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSP 530
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 109/278 (39%), Gaps = 33/278 (11%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+T+N ++ L ++ V V+E+M + G D+ TY + F K ++++AV L
Sbjct: 358 VTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRS 417
Query: 327 MMDGPYKPSVQDCSLLLRSISSIN-------------------NPDL-----------GL 356
M +P+ +++L+ + S NP GL
Sbjct: 418 MAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 477
Query: 357 VFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
V + + + G S Y + L K G DEA +++ M G P+ I YS
Sbjct: 478 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSS 537
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ L GR + + +++ D + +I C E DRA+ A M+
Sbjct: 538 IASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSG 597
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+ +LI G S+ V A ++L E+ K LR
Sbjct: 598 CVPNESTYTILIRGLASEGFVKEAQEILTELCSKGALR 635
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 84/208 (40%), Gaps = 4/208 (1%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ TY ++ LC GR DA VLD+M GC P + + ++ C A+ A+
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ + D ++++ Q V+ A +LL +++ P ++ ++ L
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSA 581
ARR +L+ M PP F + ++ + G E E ++ P
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 582 AYLQVFESFFNEGRHYEAKDLLYKCPHH 609
Y + + E R A+ +L + P +
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSY 316
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 155/355 (43%), Gaps = 25/355 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GYK +T+T+N ++ L H + +V++M + G + D+ TY + K ++ A
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + M G + V + ++ + + D F + NK E+ G Y+ +
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDA--FALFNKMETKGIRPDVFTYNSLI 297
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L GR+ +A +++ M P+ +T+S +I K G+ +A + DEM +
Sbjct: 298 SCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 357
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T++ LI G C + +D A F M+ K+ + + LI GF KRV +L
Sbjct: 358 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMEL 417
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
EM ++ L T+ TLI+ L A + A + + M PP + Y
Sbjct: 418 FREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---DIITYSILLD 473
Query: 556 -ISKFGTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+G +E KAL V EY P Y + E G+ + DL
Sbjct: 474 GLCKYGKLE------KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 128/262 (48%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ + G+ +FR ++ +GN+++ Y+ + + L
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YNTLIQGL 440
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+K+ K M + G PD ITYS ++ GLCK G+ E A V + ++++ PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A L E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M E L P + TLI L
Sbjct: 561 MKEDGTL-PDSGCYNTLIRARL 581
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
++ +YN ++ R + V+ +M K GYE DI T + + + + DAV L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 172
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M++ YKP + L+ + N + LV ++ + G Y +
Sbjct: 173 VDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQR----GCQPDLVTYGAVVN 228
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K G D A ++K M+ E D + Y+ +I GLCK +DA + ++ME G P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+ LI C A + M+E+ + + LI+ F+ + ++ A KL
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
EMI++ + P T+ +LI RL+EA ++ LM ++ P + I F
Sbjct: 349 DEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK 407
Query: 562 ---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
VE+ E + +S + ++ Y + + F G
Sbjct: 408 AKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 128/284 (45%), Gaps = 3/284 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + +L + + D +V++M + GY+ D T+ + +A
Sbjct: 145 GYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEA 204
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P + ++ + + DL L + K E +Y+ I
Sbjct: 205 VALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL--SLLKKMEKGKIEADVVIYNTII 262
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K D+A + M+ G PD TY+ +I LC GR+ DA +L M E
Sbjct: 263 DGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKIN 322
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++ LI ++ A + +M++++ D D LINGF R++ A +
Sbjct: 323 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 382
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
MI K P T+ TLI+ A+R+EE M L R M ++
Sbjct: 383 FELMISK-DCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 139/301 (46%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DA+ LF M+ PS+ + + LL +I+ + DL V + + +
Sbjct: 50 KLSRNALLNLKLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDL--VISLGERMQ 107
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+L S Y+ + + + A ++ M G+EPD +T S ++ G C + R
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRIS 167
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA ++D+M E G PD T+ LI G N+ A+ +M+++ D ++
Sbjct: 168 DAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVV 227
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + ++ A LL +M EK ++ + T+I+ L + +++A L M+ +
Sbjct: 228 NGLCKRGDIDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGI 286
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P+ + + ++F EG+ EA+
Sbjct: 287 RPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 602 L 602
L
Sbjct: 347 L 347
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 105/237 (44%), Gaps = 9/237 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN +++ + + V + + EM + G + TY + + + + A K+F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P + S+LL + + LV +E L S + Y+ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV-----FEYLQKSKMEPDIYTYNIMIE 508
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +P+ I Y+ +I G C+ G E+A + EM+E+G +P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
D + LI+ + + +M + DA + ++IN L R+ +Y
Sbjct: 569 DSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624
>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
Length = 658
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 143/308 (46%), Gaps = 8/308 (2%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLRSISSINNPDLGLVFR-- 359
++I + R + K + E AV LF M+D K SV+ + +L I + GL F
Sbjct: 114 SFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
V N ++ S + ++ + +AL KLG D A ++ + M PD TY ++ GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLC 233
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K R ++A +LDEM+ GC P + +LI G C ++ R M K +
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEV 293
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ LI+G + +++ A LL M+ + P T+ TLI L+ RR + LL
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSS-KCIPNDVTYGTLINGLVKQRRAMDGARLLIS 352
Query: 540 MKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
M+++ Y + IS K G E+A K ++ K P+ Y V + EG+
Sbjct: 353 MEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGK 412
Query: 596 HYEAKDLL 603
EAK++L
Sbjct: 413 PNEAKEIL 420
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 5/228 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K R DEA ++ M++ G P + Y+ +I GLCK G ++D M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMF 284
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC P+ T+ LI G C ++D+A+ +M+ + LING + Q+R
Sbjct: 285 LKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAM 344
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPF 552
+LL+ M E+ R Q + LI L + EEAM L + M ++ P
Sbjct: 345 DGARLLISMEER-GYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAV 403
Query: 553 VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + + G +A E L + S P+ Y + + FF G EA
Sbjct: 404 IDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEA 451
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 204/480 (42%), Gaps = 58/480 (12%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKA---KKAS 181
F+ + S M+ N N L R++ ++ I E +++ + KA +KA
Sbjct: 73 FKLGDSTLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAV 132
Query: 182 DLAALNQFHDGMVKEIAMDNVAKT---LVDVVL-------GSDWDDKIGKKLEDMKIE-- 229
DL FH MV E K+ +++V++ G ++ D + +M I
Sbjct: 133 DL-----FHR-MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186
Query: 230 -LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
LS N V+ L +L + +A+ FR + E + TY ++ L + E + + +
Sbjct: 187 GLSFNLVIKALCKLG-FVDRAIEVFRGMPEKKCLP-DGYTYCTLMDGLCKEERIDEAVLL 244
Query: 289 VEEMKKEG-------YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD--- 338
++EM+ EG Y + ID K + +++++ F + Y +
Sbjct: 245 LDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCL 304
Query: 339 -------CSLLLRSISSINNPD--------LGLV--------FRVANKYESLGNSLSKSV 375
SLL R +SS P+ GLV R+ E G L++ +
Sbjct: 305 KGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHI 364
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G+ +EA + K M G P+ + YS VI GLC+ G+ +A +L+ M
Sbjct: 365 YSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMI 424
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+GC+P++ T++ L++G + A+ + +M E + VLI+G RV
Sbjct: 425 SSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVK 484
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A + +M+ + ++P + ++I+ L G ++ A+ L M Q P V Y
Sbjct: 485 EAMMVWSKML-TIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTY 543
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 89/433 (20%), Positives = 178/433 (41%), Gaps = 59/433 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
PS +Y++++ L K L + + M C+ E TY +++ G+ K K ++
Sbjct: 255 PSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR-- 243
L + MV + N DV G+ + + ++ D L + E R
Sbjct: 315 LER----MVSSKCIPN------DVTYGTLINGLVKQR------RAMDGARLLISMEERGY 358
Query: 244 -----IYPVKALGFFR----------WVG-EHSGYKHNTITYNGILRVLARHESVRDFWN 287
IY V G F+ W G + N + Y+ ++ L R +
Sbjct: 359 RLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKE 418
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ M G ++ TY + + F K + E+A++++ M + + S+L+ +
Sbjct: 419 ILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLC 478
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM---MKAMKNAGF 404
+ ++ V +K ++G Y + + L +G D A K+ M +
Sbjct: 479 GVGRVKEAMM--VWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKS 536
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+PD +TY+ ++ GLC A ++L+ M + GC PD+ T +
Sbjct: 537 QPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNTFLN------------- 583
Query: 465 CFAKMMEKNYDADA--DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
+ EK+ + L+ L+ L ++RV+GA K++ M+ K L P +T+ ++
Sbjct: 584 ---TLSEKSDSCEEGRSFLEELVARLLKRQRVSGACKIVEVMLGKY-LAPKTSTWAMIVP 639
Query: 523 KLLGARRLEEAMN 535
++ +++ A+N
Sbjct: 640 EICKPKKINAAIN 652
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 129/283 (45%), Gaps = 3/283 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G +T ++ R + V E MK +G E ++ TY + + F +
Sbjct: 294 NGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYK 353
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ L + M + +P V +LL+R + + FR+ E G + + Y+ +
Sbjct: 354 AMALLDQMRECGVEPDVVTYNLLIRG--QCIDGHIESAFRLLRLMEGNGLAADQYTYNVL 411
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K G+ DEA + ++ G P+++T++ VI GLCK G+F+ AC L++M GC
Sbjct: 412 IDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGC 471
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T++ I+ C L +M++K+ ++I+ ++ A +
Sbjct: 472 APDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATR 531
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ +M+ + P T+ T + RL EA N++ MKK
Sbjct: 532 IWGQMV-SLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKK 573
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 153/335 (45%), Gaps = 11/335 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG++ + T+N ++ R + + ++ ++M G+ D +Y + F + +++
Sbjct: 158 SGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDE 217
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A++LF + +P + + L++ + + GL + K + LG + Y +
Sbjct: 218 ALELFREL----EQPDMYTHAALVKGLCDARRGEEGLY--MLQKMKELGWRPATRAYAAL 271
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ + +EAEKM+ M + G P +T + V+ C+ GR A V + M+ GC
Sbjct: 272 VDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGC 331
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ ++QG C +V +A+ +M E + D ++LI G + A++
Sbjct: 332 EPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR 391
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
LL ++E L Q T+ LI+ L +++EA +L ++ + P F + +
Sbjct: 392 LL-RLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGL 450
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESF 590
K G + A FL K +S P + Y E+
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENL 485
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 109/247 (44%), Gaps = 9/247 (3%)
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A+ Y + + + Y+ + RAL + A++ + M +G+ PD T++ +I G C+
Sbjct: 117 AHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCR 176
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+ + A ++ D+M G D ++ LI+G C VD AL F ++ + + A
Sbjct: 177 TQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHA-- 234
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+ G +R +L +M E + RP + L++ ++ EEA +L M
Sbjct: 235 --ALVKGLCDARRGEEGLYMLQKMKE-LGWRPATRAYAALVDLWCREQKAEEAEKMLNEM 291
Query: 541 KKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
P ++ + G + A +++ +K P+ Y + + F N G+
Sbjct: 292 FDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKV 351
Query: 597 YEAKDLL 603
Y+A LL
Sbjct: 352 YKAMALL 358
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 118/283 (41%), Gaps = 25/283 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TY +R + + NVV EMKK G +D Y + + A
Sbjct: 540 GCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHA 599
Query: 321 VKLFEFMMDGPYKPS----------------VQDCSLLLRSI-SSINNPDLGLVFRVANK 363
V + + M P+ +D L S+ +I D+ +F + K
Sbjct: 600 VTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKK 659
Query: 364 YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
NS+ S Y I ++ R DE ++ MK + Y+ ++ CK
Sbjct: 660 -----NSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ DA +L M +G +P++ ++ L+ G A + DRA F + K Y+ D +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
++I+G + Q + + ++ ++E+++ +P T+ L E+L
Sbjct: 775 KIIIDGLIRQGHPDMCHD-MISILEQMKCKPSDETYAMLTEEL 816
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 139/364 (38%), Gaps = 56/364 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E+ G + N++T+N ++ L + +E+M G D TY K +
Sbjct: 432 EYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGS 491
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ + + M+ KPS + ++++ + N GL R+ + SLG S
Sbjct: 492 REGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERN--YGLATRIWGQMVSLGCS------- 542
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
PD +TY+ + C GR +A NV+ EM++
Sbjct: 543 ----------------------------PDVVTYTTSVRAYCNEGRLHEAENVVMEMKKG 574
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKM-----MEKNYD---------ADADLLDV 483
G I D + LI GH + + D A+ M M ++ DV
Sbjct: 575 GIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDV 634
Query: 484 LINGFLSQKRVNGAYKL-LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ K + A L E+++K + + ++E RRL+E +L+ MK+
Sbjct: 635 PLKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKE 694
Query: 543 QNYPPFPEPFVQYISKFGTVE---DASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ P + + ++ F + DA L ++ + P+ +Y + F EG+
Sbjct: 695 DDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADR 754
Query: 599 AKDL 602
AK++
Sbjct: 755 AKEI 758
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 136/322 (42%), Gaps = 8/322 (2%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
+ +S V +L+ V A GFF W G GY H+ YN ++ +L + + W
Sbjct: 122 VRVSGRMVDKILRRFGSDWVAAFGFFMWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWG 181
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ +M + G + + T K+ R+ DA+ F M + + LL ++
Sbjct: 182 LIRQMDEIGCLVSLATMTKVMRRLAGANRWTDAIDAFNKMDQFGVVRDTKAMNALLDTLC 241
Query: 348 SINNPDLGLVFRVANKYESLGNSLS--KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ V R ++ L + +S ++ + + +EA MK M+ GF
Sbjct: 242 KEKS-----VKRARGVFQELRGVVPPDESSFNTLVHGWCQARMLNEARDTMKEMEEHGFS 296
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P ITY+ +I C F+ +L+EM GC P++ T+TI++ A AL
Sbjct: 297 PSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCRPNVITYTIVMHALGKAGRTQEALDV 356
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F K+ DA + +I R+ A + EM + + P A F T+I
Sbjct: 357 FDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMC-RTGIPPTVAIFNTMISAAC 415
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
+ E A+ +L M++Q+ P
Sbjct: 416 DHSQAENALKILVKMEEQSCKP 437
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 137/317 (43%), Gaps = 6/317 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T N +L L + +SV+ V +E++ D ++ + + + RM+ +A
Sbjct: 225 GVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGV-VPPDESSFNTLVHGWCQARMLNEA 283
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ M + + PSV + L+ + D V+ + N+ S G + Y +
Sbjct: 284 RDTMKEMEEHGFSPSVITYTSLIEAYCM--EKDFQTVYAILNEMCSKGCRPNVITYTIVM 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR EA + +K G PD Y+ +I+ L +AGR EDA +V DEM G
Sbjct: 342 HALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSVFDEMCRTGIP 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + + +I C ++ + AL KM E++ D L+ ++ + L
Sbjct: 402 PTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCKRQWMKILPFL 461
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+ M K + P +T+ L+ L + ++ L M + + P E F + K
Sbjct: 462 ICHMFRK-DISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQETFDLVMEKLD 520
Query: 560 -GTVEDASEFLKALSVK 575
G + A + ++ L ++
Sbjct: 521 KGNLHSAKKKIQHLKLR 537
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F V E G + + I ++G++ +RD ++ + DT K+
Sbjct: 54 ASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLL 410
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+ A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ +I CK G +L EM +G P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 96/228 (42%), Gaps = 2/228 (0%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + TY+ ++ L + + + +EM +G + T+ + K ++
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++++ M+ P + + L+ + DL + ++ G K Y +
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLC--KKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 323
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D A + K M D++ Y+ +I GLC+ GR DA +L EM G
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PD T+T++I C +V + +M + +VL+NG
Sbjct: 384 KPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + +D K+
Sbjct: 35 ASAVFAAILETKGTQRSDIYVFSGLITXYLESGFLRDAIECYRLTREHKFWVPLDXCRKV 94
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ D+ L V +
Sbjct: 95 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFC--KEGDIRLAQSVFDAITKW 152
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 153 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + L G
Sbjct: 213 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYG 272
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ +E A + M ++N
Sbjct: 273 LCKKGDLKQAHDLIDEMSMK-GLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRL 331
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P+ Y + F +G + LL
Sbjct: 332 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLL 391
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 104/247 (42%), Gaps = 8/247 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +++N ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 153 GLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDA 212
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV--YD 377
+LF+ M+D P+ + L+ DL + +++ + L SLS + Y+
Sbjct: 213 NELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYK-----QMLSQSLSPDLITYN 267
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A ++ M G +PD ITY+ +I G CK G E A M +
Sbjct: 268 TLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQE 327
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
D +T LI G C A +M+ + ++IN F + V
Sbjct: 328 NIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTG 387
Query: 498 YKLLVEM 504
KLL EM
Sbjct: 388 SKLLKEM 394
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 2/175 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ V + ++M + D+ TY ++ K ++ A
Sbjct: 223 GLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQA 282
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ D+ F + L VY +
Sbjct: 283 HDLIDEMSMKGLKPDKITYTTLIDGCC--KEGDMETAFEHQKRMIQENIRLDDVVYTALI 340
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
L + GR +AEKM++ M + G +P+ TY+ +I CK G +L EM+
Sbjct: 341 SGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWTGSKLLKEMQ 395
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 166/379 (43%), Gaps = 44/379 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVE-EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN ILR L ++ V++ +++KE Y D+ TY + K + A+KL
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKL 273
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M + KP V ++L+ I D + F N S G + ++ I R++
Sbjct: 274 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF--LNNMPSYGCQPNVITHNIILRSM 331
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
GR+ +AEK++ M G P +T++ +I LC+ G A ++L++M +GC P+
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ L+ G C ++DRA+ M+ + D + L+ +V+ A ++L +
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFG 560
+ K P T+ T+I+ L + E A+ LL M+++ P V +S+ G
Sbjct: 452 LSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 510
Query: 561 TVEDASEF---LKALSVKE---------------------------------YPSSAAYL 584
V++A +F L+ L ++ P+ A Y
Sbjct: 511 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 570
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ E EG EA DLL
Sbjct: 571 ILIEGIAYEGLAKEALDLL 589
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 171/399 (42%), Gaps = 19/399 (4%)
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKA 177
V D+ P Y+ +LR L + LKQ L R + CY + TY + I K++
Sbjct: 206 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 265
Query: 178 KKASDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
+ L++ + G ++ NV L++ + D+ K L +M V+
Sbjct: 266 GVGQAMKLLDEMRNKGSKPDVVTYNV---LINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322
Query: 237 TVLKELRIYPVKALGFFRWVGE--------HSGYKHNTITYNGILRVLARHESVRDFWNV 288
T LR RW+ G + +T+N ++ L R + ++
Sbjct: 323 THNIILR----SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDI 378
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+E+M G + +Y + F K + M+ A++ + M+ P + + LL ++
Sbjct: 379 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 438
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D+ + + N+ S G S Y+ + L+K+G+ + A K++ M+ G +PD
Sbjct: 439 DGKVDVAV--EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 496
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
ITYS ++ GL + G+ ++A ++E G P+ T+ ++ G C + + DRA+ A
Sbjct: 497 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 556
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M+ K +LI G + A LL E+ +
Sbjct: 557 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 160/361 (44%), Gaps = 10/361 (2%)
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
RI K + + E SG + ITYN ++ + + + V++ M D+
Sbjct: 161 RIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVV 217
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY I R ++ A+++ + + P V ++L+ + + +G ++ +
Sbjct: 218 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA--TCKESGVGQAMKLLD 275
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ + G+ Y+ + + K GR DEA K + M + G +P+ IT++ ++ +C G
Sbjct: 276 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 335
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R+ DA +L +M GC P + T+ ILI C + RA+ KM ++ +
Sbjct: 336 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 395
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L++GF +K+++ A + L M+ + P T+ TL+ L +++ A+ +L +
Sbjct: 396 PLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 454
Query: 543 QNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ P + + +SK G E A + L + K P Y + EG+ E
Sbjct: 455 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 514
Query: 599 A 599
A
Sbjct: 515 A 515
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L + G ++ K +++M G PD I + +I G C+ G+ + A V++ +E++G +
Sbjct: 122 RRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV 181
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ +LI G+C + E+D AL +M N D + ++ ++ A ++
Sbjct: 182 PDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEV 238
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L ++K P T+ LIE + +AM LL M+ + P + + I
Sbjct: 239 LDRQLQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G +++A +FL + S P+ + + S + GR +A+ LL
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 344
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 122/509 (23%), Positives = 207/509 (40%), Gaps = 109/509 (21%)
Query: 72 LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQF--RPSS 129
LIL L L + + T + V +L++L ND KA FFN + + PSS
Sbjct: 44 LILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSS 103
Query: 130 TVYSL----------MLRNLVNK-------DSLKQFWVTLRR----------------MK 156
+++ LR+LV + + K F + R M
Sbjct: 104 YDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVKVFLSMH 163
Query: 157 EDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD 216
+ C+ + +++ +IL VL K+K+ L + G + D V+ ++ V G
Sbjct: 164 QFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRA---DCVSYNVM--VNGWCLI 218
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ K LE +LKE+ VK G N +YN +L+
Sbjct: 219 KRTNKALE-------------MLKEM----VK-----------RGLTPNLTSYNTMLKGY 250
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + + W+ EMKK E+D+ TY + F ++ A K+F+ M+ PSV
Sbjct: 251 FRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSV 310
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ Y+ + L K D A +
Sbjct: 311 -------------------------------------ATYNAFIQVLCKKDNVDNAIVIF 333
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ M G+ P++ITY+ VI GLC G E A + M+++GC P+++T+ ++I+ C
Sbjct: 334 EEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDE 393
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG---AYKLLVEMIEKVRLRPW 513
E+D+AL F KM + + D ++LI+ +K+ + A LL+EM+++ P
Sbjct: 394 GEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDR-GFVPR 452
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+ TF ++ LL A +LRL +
Sbjct: 453 KFTFNRVLNGLLLTGNQGFAKEILRLQSR 481
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 156/374 (41%), Gaps = 7/374 (1%)
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
A L ++L S + + L I+ + V T+LK L KAL FF + H Y
Sbjct: 38 AAALATLILTSSNPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSY 97
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
H+ +Y+ + + AR ++V M+ T+ I+ ++ AVK
Sbjct: 98 SHHPSSYDHAIDISARLRDSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVK 157
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+F M +Q + +L + ++ K + + +S Y+ +
Sbjct: 158 VFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVS---YNVMVNG 214
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ R ++A +M+K M G P+ +Y+ ++ G +AG+ +A + EM++ C D
Sbjct: 215 WCLIKRTNKALEMLKEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEID 274
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+T +I G A E+ RA F M++K + I + V+ A +
Sbjct: 275 VITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFE 334
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
EM+ K + P T+ +I L +E AM + MK P + + ++Y
Sbjct: 335 EMVVKGYV-PNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDE 393
Query: 560 GTVEDASEFLKALS 573
G ++ A + + ++
Sbjct: 394 GEIDKALDLFQKMT 407
>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 589
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 147/359 (40%), Gaps = 20/359 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-IDTYIKISRQFQKFRM 316
E G++ N+ TY I+ L + +E++K ++D + Y I K M
Sbjct: 168 EDMGHQSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGM 227
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ +A+ LF M +P + + L+ + + R LGN + K +
Sbjct: 228 VCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFG--------RWKEATTLLGNMMRKGIM 279
Query: 377 DGIHR------ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ K G A+ +M M + G EPD +TY+ VI G C + DA V
Sbjct: 280 PNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKV 339
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ M G +P++ T++ LI G C +++AL +M+ + D LI GF
Sbjct: 340 FELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCK 399
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---P 547
+ A +L M E + P T +++ L + EA++L R M+K N
Sbjct: 400 AGKPEAAKELFCTMHEHDQ-HPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVV 458
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + FG + DA E L K AY + + EG +A++LL K
Sbjct: 459 IYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMK 517
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 126/249 (50%), Gaps = 6/249 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G+ N +TY+ ++ + +++ ++ EM G D+ T+ + F K E
Sbjct: 345 HKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPE 404
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVY 376
A +LF M + P++Q C+++L + ++ + L FR + E + L+ +Y
Sbjct: 405 AAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISL-FR---EMEKMNLELNVVIY 460
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + G+ ++A+++ + + G + D + Y+ +I GLCK G +DA N+L +MEE
Sbjct: 461 NIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEE 520
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NGC+P+ T+ + ++G ++ R+ M K ADA ++LI+ F + K +
Sbjct: 521 NGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKENSA 580
Query: 497 AYKLLVEMI 505
+ L E +
Sbjct: 581 LHVFLQEFV 589
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/343 (20%), Positives = 155/343 (45%), Gaps = 8/343 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + + YN ++ L ++ ++ M ++G ++ T+ + F K M+ A
Sbjct: 242 GIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRA 301
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ FM+ +P V + ++ ++ D VF + L N ++ Y +
Sbjct: 302 KTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVT---YSSL 358
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K ++A ++ M N+G PD +T+S +I G CKAG+ E A + M E+
Sbjct: 359 IHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQ 418
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+++T I++ G A+ F +M + N + + + +++++G S ++N A +
Sbjct: 419 HPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQE 478
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYI 556
L + K ++ + T+I+ L L++A NLL M++ P FV+ +
Sbjct: 479 LFSCLPSK-GIKIDVVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGL 537
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ + ++++L + K + A ++ S+F+ + A
Sbjct: 538 LQRYDISRSTKYLLLMKGKGLSADATTTELLISYFSANKENSA 580
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 71/166 (42%), Gaps = 2/166 (1%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
++ M G +P +T++ +I GLC G A D +E+ G + T+ +I G C
Sbjct: 128 VLGVMFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLC 187
Query: 455 AANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
A + A+L K+ +N D D + +++ V A L M K ++P
Sbjct: 188 KAGDTSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSK-GIQPD 246
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+ +LI L R +EA LL M ++ P + F + F
Sbjct: 247 LVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNF 292
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 96/229 (41%), Gaps = 12/229 (5%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ K+ + ++K + + G +PD T + +I LC +VL M + G P
Sbjct: 81 IVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPT 140
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ LI G CA V RA + + + +++ +ING +GA +
Sbjct: 141 VVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGA----I 196
Query: 503 EMIEKVRLRPWQ----ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQY 555
+EK++ R + T+++ L + EA+NL M + P +
Sbjct: 197 LYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHG 256
Query: 556 ISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ FG ++A+ L + K P+ + + ++F +G AK ++
Sbjct: 257 LCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIM 305
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+++ L E M+ Y P V C+ L++ ++ N + RV E G Y+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN--IPKAVRVMEILEKFGQP-DVFAYNA 163
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K+ R D+A +++ M++ F PD +TY+ +I LC G+ + A VL+++ +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 439 CIPDIKTWTILIQ-----------------------------------GHCAANEVDRAL 463
C P + T+TILI+ G C VDRA
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ K + D ++L+ L+Q + KL+ +M + + P T+ LI
Sbjct: 284 EMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITT 342
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKAL-SVKEYPS 579
L ++EEAMNLL+LMK++ P +P + + G ++ A EFL+ + S P
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y V + G+ +A ++ K
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGK 428
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 10/324 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN I+R + + V + +V ++ +G E D+ +Y + R E+
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL M P+V S+L+ ++ + + K + L + YD +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL--TPDAYSYDPLI 375
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A + GR D A + ++ M + G PD + Y+ V+ LCK G+ + A + ++ E GC
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ ++ + ++ + RAL +MM D D + +I+ + V+ A++L
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
LV+M P T+ ++ A R+E+A+N+L M P + I G
Sbjct: 496 LVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 561 -------TVEDASEFLKALSVKEY 577
+E A++ ++ ++ EY
Sbjct: 555 FAGYRAEAMELANDLVRIDAISEY 578
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 157/389 (40%), Gaps = 82/389 (21%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKK 176
K F P + Y++M+ +L ++ L L ++ D+C TY ++ G + +
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 177 AKK----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
A K D+ N GM KE +D + + ++ L D I
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVI------- 299
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWV-GEHSGYKH-------NTITYNGILRVLAR 278
S N +L L L +W GE K N +TY+ ++ L R
Sbjct: 300 ----SYNILLRAL----------LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + N+++ MK++G D +Y + F + ++ A++ E M+ P + +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL--------------- 383
+ +L ++ D L + K +G S + S Y+ + AL
Sbjct: 406 YNTVLATLCKNGKADQAL--EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 384 --------------------TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G DEA +++ M++ F P +TY+ V+ G CKA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQG 452
EDA NVL+ M NGC P+ T+T+LI+G
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 158/371 (42%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ YN ++ + + D V++ M+ + + D TY + ++ A+K+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++ +P+V ++L+ + D L ++ ++ S G Y+ I R +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G D A +M++ ++ G EPD I+Y+ ++ L G++E+ ++ +M C P++
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ILI C +++ A+ M EK DA D LI F + R++ A + L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
I L P + T++ L + ++A+ + + + P + S + D
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 565 ASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY---KCPHHIRQDSKIS 617
L+ +S P Y + EG EA +LL C H +
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 618 LLFGSAKSNKV 628
+L G K++++
Sbjct: 514 VLLGFCKAHRI 524
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 419 CKAGRFEDACNVLDEMEENG-------CI---------------------------PDIK 444
C++G + ++ ++L+ M G C PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI G C N +D A +M K++ D +++I S+ +++ A K+L ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
+ +P T+ LIE + ++EA+ L+ M + P ++ + K G
Sbjct: 220 LSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V+ A E ++ L +K P +Y + + N+G+ E + L+ K
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 153/333 (45%), Gaps = 9/333 (2%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
V+ LK++R+ AL +FRWV + H+ YN +L ++AR ++ ++EEM
Sbjct: 105 VIRRLKDVRV----ALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSM 160
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
G+ +T I++ F K R + +A + E M ++P+ + L+ ++S+ + D
Sbjct: 161 AGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADP 220
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L + + + +G ++ ++ + + GR D A ++ MK+ F D + Y+
Sbjct: 221 MLT--LLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVC 278
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I K G+ + A E++ G +PD T+T +I C A VD A+ F ++
Sbjct: 279 IDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKS 338
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ +I G+ S + N AY LL E ++ P + ++ L ++EEA+
Sbjct: 339 VPCVYAYNTMIMGYGSVGKFNEAYSLL-ERQKRKGCIPSVIAYNCILTCLGRKGKVEEAL 397
Query: 535 NLLRLMKKQNYPPFPE--PFVQYISKFGTVEDA 565
+L MK P + + K G +E A
Sbjct: 398 RILEAMKMDAAPNLTSYNILIDMLCKAGELEAA 430
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 121/545 (22%), Positives = 203/545 (37%), Gaps = 82/545 (15%)
Query: 78 WSDELENKLEELSPK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
W E K + L P +T S++ VL K + E F D + P Y+ M+
Sbjct: 292 WKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEEL--DSNKSVPCVYAYNTMI 349
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVL-KKAKKASDLAALNQFHDGMVK 195
+ + + L R K C Y IL L +K K L L
Sbjct: 350 MGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAP 409
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-IELSDNFVLTVLKELRIYPVK----AL 250
+ N+ L+D++ + + K + MK L N + + R+ + A
Sbjct: 410 NLTSYNI---LIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
F + +H +++T+ ++ L RH V D + + E+M G + Y + R
Sbjct: 467 SIFLGL-DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRN 525
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQ------DCSL----------LLRSISSIN-NPD 353
F K ED K+++ MM P + DC L I + PD
Sbjct: 526 FFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPD 585
Query: 354 L--------GLV--------FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ GLV +++ + + G L Y+ + K G+ ++A ++++
Sbjct: 586 VRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLE 645
Query: 398 AMKNAGFEPDNITYSQVIFGLCK-----------------------------------AG 422
MK G +P +TY VI GL K G
Sbjct: 646 EMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVG 705
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R ++A +L+E+ + G P+ TW L+ A E+D AL+CF M +
Sbjct: 706 RIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYS 765
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+++NG ++ N A+ EM +K L+P T+ T+I L + EA +L K
Sbjct: 766 IMVNGLCKVRKFNKAFVFWQEM-QKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKS 824
Query: 543 QNYPP 547
P
Sbjct: 825 SGGIP 829
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 130/577 (22%), Positives = 228/577 (39%), Gaps = 65/577 (11%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML- 136
W LE+ L E VV V+R+L D A +F WV K + S Y+ +L
Sbjct: 82 WGAALEDALNTFDEMPQPELVVGVIRRL-KDVRVALHYFRWVERKTKQLHSPEAYNALLM 140
Query: 137 -----RNL------VNKDSLKQF-------------WVTLRRMKEDHCYIEE-------- 164
RNL + + S+ F +V R+++E IE
Sbjct: 141 LMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRP 200
Query: 165 --ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
Y +++G L A +A + L + + E+ + ++ TL+ V D
Sbjct: 201 AYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTV-HLFTTLICVFAREGRVDAALSL 259
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE------------HSGYKHNTITYN 270
L++MK S++F +L +Y V + F VG+ G + +T+
Sbjct: 260 LDEMK---SNSFN----ADLVLYNV-CIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFT 311
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++ VL + E V + + EE+ + Y + + +A L E
Sbjct: 312 SMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRK 371
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
PSV + +L + + L A K ++ N S Y+ + L K G +
Sbjct: 372 GCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAAPNLTS---YNILIDMLCKAGELE 428
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A K+ +MK AG P+ IT + +I LCKA R ++AC++ ++ C PD T+ LI
Sbjct: 429 AALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLI 488
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G +V+ A + + KM++ +A + LI F R +K+ EM+ +
Sbjct: 489 DGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHR-GC 547
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE 567
P ++ + A +E+ L +K Q P + + + K G +D +
Sbjct: 548 SPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYK 607
Query: 568 FLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + + AY V + F G+ +A LL
Sbjct: 608 LFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 24/300 (8%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G +T YN ++ + V + ++EEMK +G + + TY + K +
Sbjct: 613 KEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRL 672
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSK 373
++A LFE K D ++++ S S I+ G V R+ Y E + L+
Sbjct: 673 DEAYMLFE-----EAKSKAVDLNVVVYS-SLIDG--FGKVGRIDEAYLILEELMQKGLTP 724
Query: 374 SVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y + + AL K DEA + MKN P+ +TYS ++ GLCK +F A
Sbjct: 725 NTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFW 784
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P+ T+T +I G V A F + D+ + +I G +
Sbjct: 785 QEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNA 844
Query: 492 KRVNGAYKLLVEMIEKVRL---RPWQATFKTLIEKLLGARRLEEAM---NLLRLMKKQNY 545
+ AY L E+ RL R + T L++ L A LE+A +LR M K +
Sbjct: 845 NKAMDAYILF----EETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 900
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 141/326 (43%), Gaps = 43/326 (13%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+++ L E M+ Y P V C+ L++ ++ N + RV E G Y+
Sbjct: 107 ESLHLLETMVRKGYNPDVILCTKLIKGFFTLRN--IPKAVRVMEILEKFGQP-DVFAYNA 163
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K+ R D+A +++ M++ F PD +TY+ +I LC G+ + A VL+++ +
Sbjct: 164 LINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDN 223
Query: 439 CIPDIKTWTILIQ-----------------------------------GHCAANEVDRAL 463
C P + T+TILI+ G C VDRA
Sbjct: 224 CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAF 283
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ K + D ++L+ L+Q + KL+ +M + + P T+ LI
Sbjct: 284 EMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCDPNVVTYSILITT 342
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKAL-SVKEYPS 579
L ++EEAMNLL+LMK++ P +P + + G ++ A EFL+ + S P
Sbjct: 343 LCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPD 402
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK 605
Y V + G+ +A ++ K
Sbjct: 403 IVNYNTVLATLCKNGKADQALEIFGK 428
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 143/324 (44%), Gaps = 10/324 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN I+R + + V + +V ++ +G E D+ +Y + R E+
Sbjct: 258 GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEG 317
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL M P+V S+L+ ++ + + K + L + YD +
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL--TPDAYSYDPLI 375
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A + GR D A + ++ M + G PD + Y+ V+ LCK G+ + A + ++ E GC
Sbjct: 376 AAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCS 435
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ ++ + ++ + RAL +MM D D + +I+ + V+ A++L
Sbjct: 436 PNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
LV+M P T+ ++ A R+E+A+N+L M P + I G
Sbjct: 496 LVDM-RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Query: 561 -------TVEDASEFLKALSVKEY 577
+E A++ ++ ++ EY
Sbjct: 555 FAGYRAEAMELANDLVRIDAISEY 578
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/389 (23%), Positives = 157/389 (40%), Gaps = 82/389 (21%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKK 176
K F P + Y++M+ +L ++ L L ++ D+C TY ++ G + +
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDE 246
Query: 177 AKK----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
A K D+ N GM KE +D + + ++ L D I
Sbjct: 247 ALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVI------- 299
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFFRWV-GEHSGYKH-------NTITYNGILRVLAR 278
S N +L L L +W GE K N +TY+ ++ L R
Sbjct: 300 ----SYNILLRAL----------LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCR 345
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + N+++ MK++G D +Y + F + ++ A++ E M+ P + +
Sbjct: 346 DGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN 405
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL--------------- 383
+ +L ++ D L + K +G S + S Y+ + AL
Sbjct: 406 YNTVLATLCKNGKADQAL--EIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILE 463
Query: 384 --------------------TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G DEA +++ M++ F P +TY+ V+ G CKA R
Sbjct: 464 MMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHR 523
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQG 452
EDA NVL+ M NGC P+ T+T+LI+G
Sbjct: 524 IEDAINVLESMVGNGCRPNETTYTVLIEG 552
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 158/371 (42%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ YN ++ + + D V++ M+ + + D TY + ++ A+K+
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++ +P+V ++L+ + D L ++ ++ S G Y+ I R +
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEAL--KLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G D A +M++ ++ G EPD I+Y+ ++ L G++E+ ++ +M C P++
Sbjct: 275 KEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ILI C +++ A+ M EK DA D LI F + R++ A + L M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED 564
I L P + T++ L + ++A+ + + + P + S + D
Sbjct: 395 ISDGCL-PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGD 453
Query: 565 ASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY---KCPHHIRQDSKIS 617
L+ +S P Y + EG EA +LL C H +
Sbjct: 454 KIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNI 513
Query: 618 LLFGSAKSNKV 628
+L G K++++
Sbjct: 514 VLLGFCKAHRI 524
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 94/225 (41%), Gaps = 39/225 (17%)
Query: 419 CKAGRFEDACNVLDEMEENG-------CI---------------------------PDIK 444
C++G + ++ ++L+ M G C PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVF 159
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI G C N +D A +M K++ D +++I S+ +++ A K+L ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
+ +P T+ LIE + ++EA+ L+ M + P ++ + K G
Sbjct: 220 LSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 562 VEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
V+ A E ++ L +K P +Y + + N+G+ E + L+ K
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTK 323
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 175/425 (41%), Gaps = 14/425 (3%)
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
D + +E+ V T + L W K+ +L + ++ + V VL+ +
Sbjct: 48 LEDDLAEELRSRLVRDTCRLLELRDSWSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDAR 107
Query: 249 A-LGFFRWVGEHSGYKHNTITYNGILRVLAR---HESVRDFWNVVEEMKKEGYEMDIDTY 304
A FFRW Y+H ++ +L +L+R H+ R V+ M + G +
Sbjct: 108 AAFEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPAR---RVMRLMIRRGMPRGTRQF 164
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + + + A+++ + M P + C++ + + D L F A +
Sbjct: 165 AHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALEF--AERM 222
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+G Y+ + + L R +A +M+ +M G PD I+Y V+ LCK R
Sbjct: 223 RRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRV 282
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
D N+L+ M + G PD T+ +LI G D AL + K + D
Sbjct: 283 ADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSAT 342
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++ F R+ A +++ EMI K RP T+ +++ L++A +++ M K
Sbjct: 343 VHSFCLNGRMAEAKEIIGEMISK-GCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNG 401
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAK 600
P ++ V +SE + L+ E PS+ Y V F EG+ E+
Sbjct: 402 CKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESC 461
Query: 601 DLLYK 605
D++ +
Sbjct: 462 DVVMQ 466
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 136/606 (22%), Positives = 234/606 (38%), Gaps = 118/606 (19%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKAS-AFFNWVCDKKQFRPSSTVYSLML 136
WS +LE +L L +T V VLR +A+ FF W + ++R + V+ ML
Sbjct: 74 WSAKLEAQLRHLLRAMTPSQVRAVLRAQAQRDARAAFEFFRWADRQWKYRHAPEVFDEML 133
Query: 137 ----RNLVNKDSLKQFWVTLRRM--KEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
R ++ + + + +RR + + S G L+ A + L
Sbjct: 134 VLLSRTRLHDPARRVMRLMIRRGMPRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQ----K 189
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
DG +I + N+A ++ VV G +I K LE
Sbjct: 190 DGCAPDICICNMAVNVL-VVAG-----RIDKALE-------------------------- 217
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
F G + +TYN +++ L + D ++ M + G D +Y +
Sbjct: 218 --FAERMRRVGVDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSF 275
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF------------ 358
K + + D L E M D P ++L+ ++ + D L F
Sbjct: 276 LCKEKRVADVQNLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVD 335
Query: 359 ---------------RVANKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMK 397
R+A E +G +SK Y + ++G D+A KMMK
Sbjct: 336 EVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMK 395
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M G +P+ +T++ ++ GLCK G+ +A +L++ EE P T+++++ G
Sbjct: 396 HMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREG 455
Query: 458 EVDRALLCFAKMMEKNY-------------------DADA-DLLD--------------- 482
++ + +M++K + ADA D ++
Sbjct: 456 KLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFT 515
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+I+GF Q + A LL +M R P T+ +++ L +++EA +L+ M
Sbjct: 516 TVIHGFSRQGDLESALSLLDDMYLTNR-HPDVVTYTVVVDALGRKGKMKEATSLVEKMLN 574
Query: 543 QNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ P P + I ++ G VED L + KE SS AY QV E G+ EA
Sbjct: 575 RGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGFSS-AYNQVIEKLCAFGKLSEA 633
Query: 600 KDLLYK 605
+LL K
Sbjct: 634 NNLLSK 639
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/470 (18%), Positives = 193/470 (41%), Gaps = 37/470 (7%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P Y+ +++ L + + M ++ C ++ +Y +++ L K K+ +D+
Sbjct: 229 PDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADV--- 285
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
N+ + + D + D +++ N ++ L + +
Sbjct: 286 -------------QNLLERMSDAGIFPD--------------QVTYNMLIHGLAK-HGHA 317
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+AL F R E ++ + + Y+ + + + + ++ EM +G D+ TY
Sbjct: 318 DEALSFLRE-SEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRPDVVTYSA 376
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F + ++ A K+ + M KP+ + LL + + + + NK E
Sbjct: 377 VVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEA--WELLNKSEE 434
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ S Y + + G+ E+ ++ M GF P + + +I LC + D
Sbjct: 435 EWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPAD 494
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + +++ + GC ++ +T +I G +++ AL M N D V+++
Sbjct: 495 AKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVD 554
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNY 545
+ ++ A L+ +M+ + L P T++T+I + +E+ +NLL +++ K+ +
Sbjct: 555 ALGRKGKMKEATSLVEKMLNR-GLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKEGF 613
Query: 546 PPFPEPFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
++ + FG + +A+ L K L + + +SF N G
Sbjct: 614 SSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQTCHILMDSFLNRG 663
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR + E SG + + Y ++ R+ ++ D + +EM G MD+ TY
Sbjct: 415 QALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K +M DA LF M++ P + L+R N D L N +E++
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL-----NLFEAM 528
Query: 368 GNS---LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ K Y+ + K G A+++ M PD+I+Y V+ G C +G
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ D+M E G P++ T LI+G+C + ++ +A +KM+ D+ + L
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+G+L + + A+ L+ EM EK L+ T+ ++ +++EA +LR M +
Sbjct: 649 IDGYLKEANLEKAFILINEM-EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 545 YPP 547
P
Sbjct: 708 INP 710
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 154/379 (40%), Gaps = 38/379 (10%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF E G + +TYN ++ R V + + ++ G E + TY I
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDL 354
K + A + M+ P+ + LL I +N PDL
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 355 -------GLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
G++ R + Y++L G +Y + + G +A KM
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G D +TY+ + GLCK F DA + +EM E G +PD T+T LI+G+C
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D+AL F M+ N D + LI+GF + A +L +MI K + P ++
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYG 576
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFL-KALSV 574
T++ + L EA+NL M ++ P ++ + G + A E+L K +S
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Query: 575 KEYPSSAAYLQVFESFFNE 593
P S +Y + + + E
Sbjct: 637 GIIPDSFSYNTLIDGYLKE 655
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 146/375 (38%), Gaps = 48/375 (12%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +L L R V W + E+ + G E+++ T + K R E+ + F+ D
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF---FLSD 282
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKL 386
K D I++ GLV F++ N + S G Y+ I L K+
Sbjct: 283 MEGKGVFADIVTYNTLINAYCRE--GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT- 445
G++D A+ ++ M G P+ TY+ ++ +C+ +A + DEM G +PD+ +
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 446 ----------------------------------WTILIQGHCAANEVDRALLCFAKMME 471
+TILI G C + AL +M+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ D + +NG +K A L EM+E+ + P TF TLI ++
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGNMD 519
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVF 587
+A+NL M + N P + I F G + A E + K+ P +Y V
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Query: 588 ESFFNEGRHYEAKDL 602
F + G EA +L
Sbjct: 580 NGFCSSGLLPEALNL 594
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 174/448 (38%), Gaps = 67/448 (14%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
LT+ +++Y L K+ + + P++ Y+ +L + +D++ +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEML--QLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M + ++ S++GVL A+ AL F + I DNV T++ + G
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVL--ARNGHLYQALMHFREMERSGIVPDNVIYTIL--IDG 441
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+ + L+ M+ E+ A G F + +TYN
Sbjct: 442 FCRNGALSDALK-MRDEM-----------------LARGCF----------MDVVTYNTF 473
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
L L + + D + EM + G D T+ + R + K M+ A+ LFE M+
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 333 KPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESLG------N 369
KP + L+ PD V N + S G N
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 370 SLSKSVYDGIH----------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ + GI + + G +A + + M + G PD+ +Y+ +I G
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K E A +++EME+ G +I T+ +++ G CA ++ A KM+E + D
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LING +SQ + A++ EM+++
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 142/365 (38%), Gaps = 50/365 (13%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
++ P + +Y++++ +L M C+++ TY + L L K K
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483
Query: 181 SDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
+D L GMV + T ++ G D + K L + + N
Sbjct: 484 ADADMLFNEMVERGMVPDFY------TFTTLIRGYCKDGNMDKALNLFEAMVRTNL---- 533
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
K + +TYN ++ + + + ++M ++
Sbjct: 534 ------------------------KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D +Y + F ++ +A+ L + M++ +P++ C+ L++ +
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD------- 622
Query: 359 RVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ YE L +S + Y+ + K ++A ++ M+ G + + ITY+
Sbjct: 623 -MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ G C G+ ++A VL +M E G PD T++ LI GH + + + A +M+++
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 473 NYDAD 477
D
Sbjct: 742 GLVPD 746
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S+S + + + L + G D A ++ + G E + T + ++ LCK +FE+
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L +ME G DI T+ LI +C V+ A + + + ++ G
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A +L+EM++ + L P AT+ TL+ ++ + EA + M ++ P
Sbjct: 337 LCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 548 FPEPFVQYISKFGTVEDASEFLKAL 572
V + S G + +AL
Sbjct: 396 ---DLVSFSSLIGVLARNGHLYQAL 417
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 115/523 (21%), Positives = 206/523 (39%), Gaps = 80/523 (15%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA---- 180
+ S Y+ ++ L L L++M + C TY +++ L KA++
Sbjct: 6 YDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAI 65
Query: 181 ------------SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIG-------- 220
DL N G+ MD+ L ++V + I
Sbjct: 66 QTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWN 125
Query: 221 ---KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH------------- 264
++L+ + + + + + L +Y GF + S Y+
Sbjct: 126 CRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIP 185
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN + L + + ++EEM + G D+ T+ I K ++DA ++F
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M++ P S++L ++S N
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRAN---------------------------------- 271
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+L DE + M+AMK AG + T++ I LC++G+F A N+L M E+G +P++
Sbjct: 272 RLDTVDEVLEHMQAMK-AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLL 330
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ +I G C + VD A KM++ D + LI+GF R++ A++LL+E
Sbjct: 331 SYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIE 390
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFG 560
M K P T+ TLI+ L++A LL+ M+ P + I +K G
Sbjct: 391 MKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHG 450
Query: 561 TVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
E+A +S K +P Y V +F G +A+ +
Sbjct: 451 MYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGV 493
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 129/289 (44%), Gaps = 15/289 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY + +TY ++ L + + ++++M G ++ TY + K R D
Sbjct: 4 NGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHD 63
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFR--VANKYESLGNSLSKSVY 376
A++ + M+ +P + + L+ + N D GLV + V N + + S V
Sbjct: 64 AIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVI 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA----GRFEDACNVLD 432
R R D+A +++ M G + + Y IFG C+A R+E C D
Sbjct: 124 WNCRRR-----RLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYE--CRDGD 176
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM E+G IPD+ T+ I G C A ++D+ L +M D +I+G
Sbjct: 177 EMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
R++ A+++ M+E+ + P T+ +++ L A RL+ +L M+
Sbjct: 237 RIDDAFQVFKGMLERGCV-PDSLTYSIMLDNLSRANRLDTVDEVLEHMQ 284
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 116/286 (40%), Gaps = 43/286 (15%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M GY+ + TY + K ++ A L + M D P+V
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNV--------------- 45
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
Y + L K R +A + +K M +G EPD +TY
Sbjct: 46 ----------------------VTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTY 83
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I GLC A R +DA VL E+ NG P+ T++ L+ +C +D+A +M+
Sbjct: 84 NSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMIL 143
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLL--VEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + + I GF + + Y+ EMIE R+ P T+ T I L A +
Sbjct: 144 RGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRI-PDVVTYNTFISGLCKAGK 202
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
L++ + +L M + PP F IS K ++DA + K +
Sbjct: 203 LDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGM 248
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 148/351 (42%), Gaps = 29/351 (8%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G T+N + L R N++ M + G ++ +Y + K ++D
Sbjct: 288 AGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDD 347
Query: 320 AVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--- 375
A KL M+D G KP V + L+ R++ ++ L +K++
Sbjct: 348 AWKLSRKMLDSGCCKPDVIFFNTLISGFCKAG--------RLSQAHQLLIEMKAKNICVP 399
Query: 376 ----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + +K G +A+ +++ M+ G +P+ +TY+ +I G K G +E+A ++
Sbjct: 400 DVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLF 459
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN--YDADADLLDVLINGFL 489
DEM GC PDI T+ ++ A + +A + ++ K DA +LI+G+
Sbjct: 460 DEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYC 519
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQA---TFKTLIEKLLGARRL-EEAMNLLRLMKKQNY 545
+ LL EM R W T+ LI KL + +A+ + + M Q+
Sbjct: 520 RAEDTEQGLTLLQEMTA----RGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDC 575
Query: 546 PPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
P F + F G V A ++ ++ K + A+ L+ N+
Sbjct: 576 VPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKGHLVDASNLEALNKESND 626
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 117/540 (21%), Positives = 212/540 (39%), Gaps = 43/540 (7%)
Query: 72 LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV 131
+ L+ W+ E +L L L V VLR D A FF W + ++ V
Sbjct: 144 ITLSSAWNPNFEGRLRHLLRSLKPPLVCAVLRS-QADERVALNFFYWADRQWRYSHHPVV 202
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALNQFH 190
Y ML L + LR M E + ++ +A K + L L
Sbjct: 203 YYTMLDVLSKTKLCQGARRVLRLMTRRGIECPPEAFGYVMVSYSRAGKLRNALRVLTLMQ 262
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
V+ ++ T + V++ +K K LE M++
Sbjct: 263 KAGVEPSL--SICNTTIYVLVKGGKLEKALKFLERMQV---------------------- 298
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
+G K + +TYN +++ + D ++ + +G D +Y +
Sbjct: 299 ---------TGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGF 349
Query: 311 FQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K + +E+ L E M+ + P + L+ +S + D L F + + G
Sbjct: 350 LCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAF--LKEAQDKGF 407
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ K Y I + + GR DEA+ ++ M + G PD +TY+ ++ G C+ GR ++A
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKK 467
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+L +M ++GC P+ ++T L+ G C + + A E + +A +++G
Sbjct: 468 ILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLR 527
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ +++ A L EM+EK P LI+ L +++ EA L +
Sbjct: 528 REGKLSEACDLTREMVEK-GFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINV 586
Query: 550 EPFVQYISKFGTVEDASEFLKALS----VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F I F + D L L ++P + Y +F++ +GR EA +L+ K
Sbjct: 587 VNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVK 646
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 160/349 (45%), Gaps = 8/349 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F + + G+ + + Y+ I+ + + + ++V +M G D+ TY I
Sbjct: 395 ALAFLKE-AQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIV 453
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDLGLVFRVANKYESL 367
F + +++A K+ + M KP+ + LL + S + + + V+ ++
Sbjct: 454 DGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWT 513
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N+++ Y + L + G+ EA + + M GF P + + +I LC+ + +A
Sbjct: 514 PNAIT---YGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEA 570
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L+E GC ++ +T +I G C +++ AL M DA L +
Sbjct: 571 KKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDA 630
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYP 546
+ R++ A +L+V+M+ K L P T++++I + R+++ +NLL +++K+Q +
Sbjct: 631 LGKKGRLDEAAELIVKMLSK-GLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKRQPFR 689
Query: 547 PFPEPFVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
++ + FG +E+A + L K L + + ES+ +G
Sbjct: 690 TVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKG 738
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 113/255 (44%), Gaps = 15/255 (5%)
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
++ G+ A +++ M+ AG EP + I+ L K G+ E A L+ M+ G PDI
Sbjct: 246 SRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTGIKPDI 305
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ LI+G+C N ++ AL A + K D ++ +K++ L+ +
Sbjct: 306 VTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVKCLMEK 365
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
M+ L P Q T+ TLI L ++A+ L+ + + + + + F G
Sbjct: 366 MVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHSFCQKG 425
Query: 561 TVEDASEFLKALSVKEY-----PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSK 615
+++A K+L + Y P Y + + F GR EAK +L + H + +
Sbjct: 426 RMDEA----KSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNT 481
Query: 616 IS---LLFGSAKSNK 627
+S LL G S K
Sbjct: 482 VSYTALLNGLCHSGK 496
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 58/288 (20%), Positives = 110/288 (38%), Gaps = 41/288 (14%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY---EMDIDTYIKISRQFQ 312
V E + N ITY ++ L R + + ++ EM ++G+ ++I+ I+ Q Q
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K + +A K E ++ +V + + ++ I D+ V + G
Sbjct: 566 K---VVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG--DMEAALSVLDDMYLSGKHPD 620
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY--------------------- 411
Y + AL K GR DEA +++ M + G +P +TY
Sbjct: 621 AVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLE 680
Query: 412 ------------SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
+QVI LC G E+A +L ++ D T +L++ +
Sbjct: 681 KMLKRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVA 740
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
A +M +N D L + + + ++ A L++ +E+
Sbjct: 741 ISAYKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVER 788
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F V E G + + I ++G++ +RD ++ + DT K+
Sbjct: 54 ASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLL 410
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+ A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D +++N F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ ++ CK G +L EM+ +G P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 2/228 (0%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + TY+ ++ L + + + +EM +G + T+ + K ++
Sbjct: 206 SGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 265
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++++ M+ P + + L+ + DL + ++ G K Y +
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNTLIYGLC--KKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 323
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D A + K M D++ Y+ +I GLC+ GR DA +L EM G
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PD T+T+++ C +V + +M + +VL+NG
Sbjct: 384 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 155/347 (44%), Gaps = 8/347 (2%)
Query: 261 GYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G+ ++YN IL + R +SV+ + +EM + G ++ TY + R F +E
Sbjct: 162 GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEM 221
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ F M P+V + ++ + + +G F++ G + + Y+ +
Sbjct: 222 GLFFFGEMERNGCLPNVVTYNTIIDAYCKLR--KIGEAFKLLRLMALKGLNPNLISYNVV 279
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + G+ E ++++ M + PD +T++ +I G C G F A + EM +NG
Sbjct: 280 INGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGL 339
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+T LI C A ++RA+ +M ++ + LI+GF Q + AY+
Sbjct: 340 SPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQ 399
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
++ EM+E P T+ LI R+E+A LL+ M ++ + P + IS F
Sbjct: 400 IMKEMVEN-GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGF 458
Query: 560 G---TVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+E A + + K P A Y + + + R E DL
Sbjct: 459 CRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDL 505
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 164/365 (44%), Gaps = 26/365 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +TY ++ + + ++ +++M+ G + TY + F + ++
Sbjct: 337 NGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQ 396
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYD 377
A ++ + M++ + P++ + L+ + + GL+ + + G Y
Sbjct: 397 AYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIER----GFIPDVVSYS 452
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + ++A ++ M G PD TYS +I GLCK R + C++ EM
Sbjct: 453 TIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSL 512
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD T+T LI +C ++D+AL +M++K + D +VLINGF Q R A
Sbjct: 513 GLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEA 572
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEK-----------LLGARRLEEAMN----LLRLMKK 542
+LL++++ + + P + T+ TLI+ L+ ++ MN +L M +
Sbjct: 573 KRLLLKLLYEESV-PNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQ 631
Query: 543 QNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ Y E + I SK G +E A K + + P S + + +S ++EG+ E
Sbjct: 632 KGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVE 691
Query: 599 AKDLL 603
LL
Sbjct: 692 LNQLL 696
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 105/263 (39%), Gaps = 41/263 (15%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV----------------- 414
S +V+D + ++ ++ ++A ++ K+ GF P ++Y+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 415 -------------------IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
I G C AG E EME NGC+P++ T+ +I +C
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++ A M K + + +V+ING + ++ ++L EM K R P +
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM-SKRRYVPDRV 309
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
TF TLI +A+ L M K P + I+ K G + A EFL +
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 573 SVKE-YPSSAAYLQVFESFFNEG 594
+ +P+ Y + + F +G
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQG 392
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 165/364 (45%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
P +AL R + + N +TYN ++ V+ +++ EM+ + G + TY
Sbjct: 57 PARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 111
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +++AVK+F E + G KP + L+ D L++R ++
Sbjct: 112 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR--DR 169
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR EA ++++ M G PD TY+ +I G CK G
Sbjct: 170 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 229
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI +V F + + + D L +
Sbjct: 230 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 289
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L R++EA L+ M K+
Sbjct: 290 LINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 348
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G V+DA + K + P+ Y + + G+ +A
Sbjct: 349 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 408
Query: 600 KDLL 603
++++
Sbjct: 409 ENMV 412
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G TYN ++ L + + +VEEM +G D+ TY + K ++ A
Sbjct: 174 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 233
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANK 363
+++FE M + +V + L+ ++S PDL L
Sbjct: 234 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL------- 286
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y +L NS S S G D A ++M M+ PD++TY+ ++ GLC GR
Sbjct: 287 YNALINSHSTS------------GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 334
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++DEM + G PD+ T+ LI G+ +V AL +MM K ++ +
Sbjct: 335 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
LI G + + A ++ EM+E + P +T+ +LIE L
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLIEGL 434
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ + +V+ + E M + G + TY + K +++
Sbjct: 209 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 268
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ + +P + + L+ S S+ N D F + + E + Y+ +
Sbjct: 269 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR--AFEIMGEMEKKRIAPDDVTYNTLM 326
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L LGR DEA K++ M G +PD +TY+ +I G G +DA + +EM G
Sbjct: 327 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 386
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
P + T+ LIQG C + D A +M+E D LI G ++
Sbjct: 387 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 437
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A ++
Sbjct: 39 LCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDI 94
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGF 488
+ EM E G I P+ T+ +I G C VD A+ F +M+ K +A + + LI G+
Sbjct: 95 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 154
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q +++ A M+E+ + AT+ L+ L R EA L+ M + P
Sbjct: 155 CDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 212
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 140/303 (46%), Gaps = 10/303 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR + E SG + + Y ++ R+ ++ D + +EM G MD+ TY
Sbjct: 415 QALMHFREM-ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTF 473
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K +M DA LF M++ P + L+R N D L N +E++
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL-----NLFEAM 528
Query: 368 GNS---LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ K Y+ + K G A+++ M PD+I+Y V+ G C +G
Sbjct: 529 VRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLL 588
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A N+ D+M E G P++ T LI+G+C + ++ +A +KM+ D+ + L
Sbjct: 589 PEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTL 648
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+G+L + + A+ L+ EM EK L+ T+ ++ +++EA +LR M +
Sbjct: 649 IDGYLKEANLEKAFILINEM-EKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIG 707
Query: 545 YPP 547
P
Sbjct: 708 INP 710
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 154/379 (40%), Gaps = 38/379 (10%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF E G + +TYN ++ R V + + ++ G E + TY I
Sbjct: 278 FFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGL 337
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDL 354
K + A + M+ P+ + LL I +N PDL
Sbjct: 338 CKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDL 397
Query: 355 -------GLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
G++ R + Y++L G +Y + + G +A KM
Sbjct: 398 VSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDE 457
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G D +TY+ + GLCK F DA + +EM E G +PD T+T LI+G+C
Sbjct: 458 MLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGN 517
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+D+AL F M+ N D + LI+GF + A +L +MI K + P ++
Sbjct: 518 MDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRK-DIIPDHISYG 576
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFL-KALSV 574
T++ + L EA+NL M ++ P ++ + G + A E+L K +S
Sbjct: 577 TVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISN 636
Query: 575 KEYPSSAAYLQVFESFFNE 593
P S +Y + + + E
Sbjct: 637 GIIPDSFSYNTLIDGYLKE 655
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 146/375 (38%), Gaps = 48/375 (12%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +L L R V W + E+ + G E+++ T + K R E+ + F+ D
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMF---FLSD 282
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKL 386
K D I++ GLV F++ N + S G Y+ I L K+
Sbjct: 283 MEGKGVFADIVTYNTLINAYCRE--GLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT- 445
G++D A+ ++ M G P+ TY+ ++ +C+ +A + DEM G +PD+ +
Sbjct: 341 GKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSF 400
Query: 446 ----------------------------------WTILIQGHCAANEVDRALLCFAKMME 471
+TILI G C + AL +M+
Sbjct: 401 SSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLA 460
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ D + +NG +K A L EM+E+ + P TF TLI ++
Sbjct: 461 RGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVER-GMVPDFYTFTTLIRGYCKDGNMD 519
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVF 587
+A+NL M + N P + I F G + A E + K+ P +Y V
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579
Query: 588 ESFFNEGRHYEAKDL 602
F + G EA +L
Sbjct: 580 NGFCSSGLLPEALNL 594
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 174/448 (38%), Gaps = 67/448 (14%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTL 152
LT+ +++Y L K+ + + P++ Y+ +L + +D++ +
Sbjct: 328 LTYNAILYGLCKIGKYDRAKDVLIEML--QLGLTPNAATYNTLLVEICRRDNILEAQEIF 385
Query: 153 RRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M + ++ S++GVL A+ AL F + I DNV T++ + G
Sbjct: 386 DEMSRRGVLPDLVSFSSLIGVL--ARNGHLYQALMHFREMERSGIVPDNVIYTIL--IDG 441
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+ + L+ M+ E+ A G F + +TYN
Sbjct: 442 FCRNGALSDALK-MRDEM-----------------LARGCF----------MDVVTYNTF 473
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
L L + + D + EM + G D T+ + R + K M+ A+ LFE M+
Sbjct: 474 LNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNL 533
Query: 333 KPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESLG------N 369
KP + L+ PD V N + S G N
Sbjct: 534 KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALN 593
Query: 370 SLSKSVYDGIH----------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ + GI + + G +A + + M + G PD+ +Y+ +I G
Sbjct: 594 LCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYL 653
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K E A +++EME+ G +I T+ +++ G CA ++ A KM+E + D
Sbjct: 654 KEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGA 713
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LING +SQ + A++ EM+++
Sbjct: 714 TYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/365 (18%), Positives = 142/365 (38%), Gaps = 50/365 (13%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
++ P + +Y++++ +L M C+++ TY + L L K K
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483
Query: 181 SDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
+D L GMV + T ++ G D + K L + + N
Sbjct: 484 ADADMLFNEMVERGMVPDF------YTFTTLIRGYCKDGNMDKALNLFEAMVRTNL---- 533
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
K + +TYN ++ + + + ++M ++
Sbjct: 534 ------------------------KPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDII 569
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
D +Y + F ++ +A+ L + M++ +P++ C+ L++ +
Sbjct: 570 PDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGD------- 622
Query: 359 RVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ YE L +S + Y+ + K ++A ++ M+ G + + ITY+
Sbjct: 623 -MPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYN 681
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ G C G+ ++A VL +M E G PD T++ LI GH + + + A +M+++
Sbjct: 682 LILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Query: 473 NYDAD 477
D
Sbjct: 742 GLVPD 746
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S+S + + + L + G D A ++ + G E + T + ++ LCK +FE+
Sbjct: 217 GVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENV 276
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L +ME G DI T+ LI +C V+ A + + + ++ G
Sbjct: 277 MFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYG 336
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A +L+EM++ + L P AT+ TL+ ++ + EA + M ++ P
Sbjct: 337 LCKIGKYDRAKDVLIEMLQ-LGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLP 395
Query: 548 FPEPFVQYISKFGTVEDASEFLKAL 572
V + S G + +AL
Sbjct: 396 ---DLVSFSSLIGVLARNGHLYQAL 417
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
V+++A +VAK + V++ S + L+ + +S V VL R + FF
Sbjct: 29 VRDVA--DVAKNISKVLMSSP-QLVLDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFF 85
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+W + Y+H+ Y+ ++ A+ + W+++ M+K+ ++++T+ + R++ +
Sbjct: 86 QWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKM-LNVETFCIVMRKYAR 144
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS- 372
+ +++A+ F M P++ + LL ++ N V + +E++ + +
Sbjct: 145 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-----VRKAQEVFENMRDRFTP 199
Query: 373 -KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + K +A ++ + M +AG PD +TYS ++ LCKAGR ++A ++
Sbjct: 200 DSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIV 259
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+ + C P +++L+ + N ++ A+ F +M AD + + LI F
Sbjct: 260 RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKA 319
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
R+ Y++L EM K + P + ++ L+ +EA ++ R M K P
Sbjct: 320 NRMKNVYRVLKEMKSK-GVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEP 373
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 139/351 (39%), Gaps = 54/351 (15%)
Query: 232 DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ F + + K R V + V E N + +NG+L L + ++VR V E
Sbjct: 133 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 192
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M+ + + D TY + + K + A ++F M+D P + S+++ +
Sbjct: 193 MR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGR 251
Query: 352 PD--LGLVFRVANKYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
D LG+V S+ S+ K +Y + R +EA M+ +G +
Sbjct: 252 VDEALGIV-------RSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 304
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENG---------------------------- 438
D ++ +I CKA R ++ VL EM+ G
Sbjct: 305 DVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVF 364
Query: 439 ------CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
C PD T+T++I+ C E++ A + M +K VLING ++
Sbjct: 365 RKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEER 424
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
A LL EMIE + +RP TF L + L+ R L E MN+L
Sbjct: 425 TTQKACVLLEEMIE-MGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKMNVL 474
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/397 (22%), Positives = 169/397 (42%), Gaps = 16/397 (4%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L++ L++ +++ E V VL + N FF W ++ + S Y +M+ +
Sbjct: 51 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 110
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
K W + M++ + ET+ ++ +A+K + A+ F+ ++ +
Sbjct: 111 IRQYKLMWDLINAMRKKK-MLNVETFCIVMRKYARAQKVDE--AIYAFNVMEKYDLPPNL 167
Query: 202 VA-KTLVDVVLGSDWDDKIGKKLEDMKIELS-DNFVLTVL-----KELRIYPVKALGFFR 254
VA L+ + S K + E+M+ + D+ ++L KE + KA FR
Sbjct: 168 VAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNL--PKAREVFR 225
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ + +G + +TY+ ++ +L + V + +V M + Y + +
Sbjct: 226 EMID-AGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 284
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+E+AV F M K V + L+ + N + V+RV + +S G + +
Sbjct: 285 NRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANR--MKNVYRVLKEMKSKGVTPNSK 342
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ I R L + G DEA + + M EPD TY+ VI C+ E A V M
Sbjct: 343 SCNIILRHLIERGEKDEAFDVFRKMIKVC-EPDADTYTMVIKMFCEKKEMETADKVWKYM 401
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ G P + T+++LI G C +A + +M+E
Sbjct: 402 RKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIE 438
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 2/183 (1%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T+ V+ +A + ++A + ME+ P++ + L+ C + V +A F M
Sbjct: 134 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENM 193
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ + D+ +L+ G+ + + A ++ EMI+ P T+ +++ L A R
Sbjct: 194 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMID-AGCHPDIVTYSIMVDILCKAGR 251
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
++EA+ ++R M P + + +GT E + E A + VF S
Sbjct: 252 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNS 311
Query: 590 FFN 592
Sbjct: 312 LIG 314
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 166/379 (43%), Gaps = 44/379 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVE-EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN ILR L ++ V++ +++KE Y D+ TY + K + A+KL
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYP-DVITYTILIEATCKESGVGQAMKL 216
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M + KP V ++L+ I D + F N S G + ++ I R++
Sbjct: 217 LDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKF--LNNMPSYGCQPNVITHNIILRSM 274
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
GR+ +AEK++ M G P +T++ +I LC+ G A ++L++M +GC P+
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ L+ G C ++DRA+ M+ + D + L+ +V+ A ++L +
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFG 560
+ K P T+ T+I+ L + E A+ LL M+++ P V +S+ G
Sbjct: 395 LSSK-GCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREG 453
Query: 561 TVEDASEF---LKALSVKE---------------------------------YPSSAAYL 584
V++A +F L+ L ++ P+ A Y
Sbjct: 454 KVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYT 513
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ E EG EA DLL
Sbjct: 514 ILIEGIAYEGLAKEALDLL 532
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 160/361 (44%), Gaps = 10/361 (2%)
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
RI K + + E SG + ITYN ++ + + + V++ M D+
Sbjct: 104 RIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVV 160
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY I R ++ A+++ + + P V ++L+ + + +G ++ +
Sbjct: 161 TYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA--TCKESGVGQAMKLLD 218
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ + G+ Y+ + + K GR DEA K + M + G +P+ IT++ ++ +C G
Sbjct: 219 EMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTG 278
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R+ DA +L +M GC P + T+ ILI C + RA+ KM ++ +
Sbjct: 279 RWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYN 338
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L++GF +K+++ A + L M+ + P T+ TL+ L +++ A+ +L +
Sbjct: 339 PLLHGFCKEKKMDRAIEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 397
Query: 543 QNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYE 598
+ P + + +SK G E A + L + K P Y + EG+ E
Sbjct: 398 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 457
Query: 599 A 599
A
Sbjct: 458 A 458
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 171/399 (42%), Gaps = 19/399 (4%)
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKA 177
V D+ P Y+ +LR L + LKQ L R + CY + TY + I K++
Sbjct: 149 VLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKES 208
Query: 178 KKASDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
+ L++ + G ++ NV L++ + D+ K L +M V+
Sbjct: 209 GVGQAMKLLDEMRNKGSKPDVVTYNV---LINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265
Query: 237 TVLKELRIYPVKALGFFRWVGE--------HSGYKHNTITYNGILRVLARHESVRDFWNV 288
T LR RW+ G + +T+N ++ L R + ++
Sbjct: 266 THNIILR----SMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDI 321
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+E+M G + +Y + F K + M+ A++ + M+ P + + LL ++
Sbjct: 322 LEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCK 381
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D+ + + N+ S G S Y+ + L+K+G+ + A K++ M+ G +PD
Sbjct: 382 DGKVDVAV--EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDI 439
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
ITYS ++ GL + G+ ++A ++E G P+ T+ ++ G C + + DRA+ A
Sbjct: 440 ITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAY 499
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
M+ K +LI G + A LL E+ +
Sbjct: 500 MISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 110/227 (48%), Gaps = 8/227 (3%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L + G ++ K +++M G PD I + +I G C+ G+ + A V++ +E++G +
Sbjct: 65 RRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAV 124
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ +LI G+C + E+D AL +M N D + ++ ++ A ++
Sbjct: 125 PDVITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEV 181
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L ++K P T+ LIE + +AM LL M+ + P + + I
Sbjct: 182 LDRQLQK-ECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G +++A +FL + S P+ + + S + GR +A+ LL
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 287
>gi|449450197|ref|XP_004142850.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 632
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 200/477 (41%), Gaps = 63/477 (13%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L++ ++EL P L H + +L + ++ A AFFNWV R SS Y L++ L
Sbjct: 85 LQSHIKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAW 144
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL---AALNQFH---DGMVK 195
+QF + ++ + E ++ + K + D+ L H + ++
Sbjct: 145 S---RQFPLAMKFLSE------------LIELSKDVSSSEDVFQNLVLCTEHCNWNPVIF 189
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
E+ + K +D++ S W K KL + ++ N +L L +++ + +
Sbjct: 190 EMLIKAYVK--LDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK-SDAQCWELYEE 246
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G G N T+N + VL R V +E+M++EG++ D+ TY + + +
Sbjct: 247 MGR-IGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRG 305
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+EDA L++ M Y+ V PDL
Sbjct: 306 RLEDAFYLYKIM----YRRGVM--------------PDL-------------------VS 328
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + R L +LGR EA ++ M + G +PD + Y+ +I CK G ++A ++L EM
Sbjct: 329 YTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMI 388
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD T IL++G+ + AL ++ + D+ LI + R
Sbjct: 389 GIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPF 448
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
A LL ++E +P + LIE + + EA+ L M +NY P + +
Sbjct: 449 AAKSLLERILED-SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTY 504
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+++ + +A KL E+ K M GF P+ I + ++ GL K + +EM
Sbjct: 188 IFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEM 247
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G + T+ IL C +V++ KM E+ +D D + LI+ ++ + R+
Sbjct: 248 GRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRL 307
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
A+ L +++ + + P ++ +L+ L R+ EA L M + P
Sbjct: 308 EDAF-YLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 366
Query: 552 FVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G +++A L + + + +P S + E + EGR A +L+
Sbjct: 367 LIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLV 419
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 124/529 (23%), Positives = 213/529 (40%), Gaps = 60/529 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI------LGVLKKAK 178
P + Y+ +L K L + L RMK+D TY ++ LG +K+A
Sbjct: 235 LSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQAT 294
Query: 179 KASDLAALNQF---------------HDGMVKEI-----AMDNVAKTLVDVVLGSDWDDK 218
K + N F G V E M+ + L DVV + D
Sbjct: 295 KVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADA 354
Query: 219 IGK---------KLEDMKIE------LSDNFVLTVL---KELRIYPVKALGFFRWVGEHS 260
K LE+M+ + ++ N V+ L EL ALG + +
Sbjct: 355 CFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE----GALGCLNKMAD-D 409
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ + ++ + +++EM + G ++D T + K + E+A
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + + P ++ + N + L R+ ++ + S S Y+ +
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL--RLWDEMIEKKLTPSISTYNTLI 527
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L+++GR EA + + G PD+ TY+ +I CK G E+A ++M EN
Sbjct: 528 KGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFK 587
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T L+ G C ++D+AL F +EK D + LI V+ A
Sbjct: 588 PDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHF 647
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+M E L+P T+ ++ L A R EEA N+L + + + F + K
Sbjct: 648 FADM-EARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGT--LSQSFSSPLLKPS 704
Query: 561 TVEDASEFLKALSVKEY------PSSAAYLQVFESFFNEGRHYEAKDLL 603
+V++A A + +E +S AY ++ G+ EAK +L
Sbjct: 705 SVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAIL 753
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 150/347 (43%), Gaps = 42/347 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN +L R + + ++ MKK+G TY + + + ++ A
Sbjct: 234 GLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQA 293
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGI 379
K+ E M ++P + ++L + D FR+ ++ E LG L V Y+ +
Sbjct: 294 TKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEA--FRLKDEMERLGTLLPDVVTYNTL 351
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K +A ++++ M+ G + +T++ VI GLCK G E A L++M ++G
Sbjct: 352 ADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGL 411
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ LI HC A + +A +M+ + D L+ ++ +KR A
Sbjct: 412 APDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEAQG 471
Query: 500 LLV-----------------------------------EMIEKVRLRPWQATFKTLIEKL 524
LL EMIEK +L P +T+ TLI+ L
Sbjct: 472 LLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEK-KLTPSISTYNTLIKGL 530
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
RL+EA++ L + ++ P + + K G +E+A +F
Sbjct: 531 SRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQF 577
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 1/166 (0%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+H +K G +A + M+ G PD +TY+ ++ C+ G +A +L M+++G
Sbjct: 211 VHTHCSK-GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P T+ L+ + + +A M ++ D +VL G +V+ A+
Sbjct: 270 VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+L EM L P T+ TL + R +A+ LL M+++
Sbjct: 330 RLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKG 375
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 41/269 (15%)
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ G S Y+ + A + G EA ++ MK G P TY+ ++ + G
Sbjct: 231 QGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWI 290
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL--------------------- 463
+ A V++ M NG PD+ T+ +L G C A +VD A
Sbjct: 291 KQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNT 350
Query: 464 ---LCFA------------KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
CF +M EK A +++I G + GA L +M +
Sbjct: 351 LADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADD- 409
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP--PFPEPFVQY-ISKFGTVEDA 565
L P T+ TLI A + +A L+ M ++ F V Y + K E+A
Sbjct: 410 GLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKRYEEA 469
Query: 566 SEFLKALSVKEY-PSSAAYLQVFESFFNE 593
L++ + + P +Y V ++F E
Sbjct: 470 QGLLQSPPQRGFMPDEVSYGTVMAAYFKE 498
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 1/133 (0%)
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P++ T++ ++ C G DA + L M+ G PD T+ L+ HC + A
Sbjct: 200 LHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEAR 259
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
A+M + + L++ + + A K +VE + P T+ L
Sbjct: 260 ALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATK-VVEAMTANGFEPDLWTYNVLAAG 318
Query: 524 LLGARRLEEAMNL 536
L A +++EA L
Sbjct: 319 LCQAGKVDEAFRL 331
>gi|449483905|ref|XP_004156728.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Cucumis sativus]
Length = 636
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 113/477 (23%), Positives = 200/477 (41%), Gaps = 63/477 (13%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L++ ++EL P L H + +L + ++ A AFFNWV R SS Y L++ L
Sbjct: 89 LQSHIKELIPHLGHRQISKILLRCQSNFVSALAFFNWVKYDLDIRLSSHNYCLIIHILAW 148
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL---AALNQFH---DGMVK 195
+QF + ++ + E ++ + K + D+ L H + ++
Sbjct: 149 S---RQFPLAMKFLSE------------LIELSKDVSSSEDVFQNLVLCTEHCNWNPVIF 193
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
E+ + K +D++ S W K KL + ++ N +L L +++ + +
Sbjct: 194 EMLIKAYVK--LDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMK-SDAQCWELYEE 250
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
+G G N T+N + VL R V +E+M++EG++ D+ TY + + +
Sbjct: 251 MGR-IGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRG 309
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+EDA L++ M Y+ V PDL
Sbjct: 310 RLEDAFYLYKIM----YRRGVM--------------PDL-------------------VS 332
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + R L +LGR EA ++ M + G +PD + Y+ +I CK G ++A ++L EM
Sbjct: 333 YTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNTLIGAYCKDGMLQEARSLLHEMI 392
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD T IL++G+ + AL ++ + D+ LI + R
Sbjct: 393 GIGIHPDSFTCRILVEGYGREGRLISALNLVVEIQKLGVTVAHDIYKYLIISLCREDRPF 452
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
A LL ++E +P + LIE + + EA+ L M +NY P + +
Sbjct: 453 AAKSLLERILED-SFQPDSDIYNKLIESFCRSNNVSEALLLKLEMINRNYKPTTDTY 508
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 5/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+++ + +A KL E+ K M GF P+ I + ++ GL K + +EM
Sbjct: 192 IFEMLIKAYVKLDLIHESYWSFKKMVKLGFVPNVIACNCILNGLAKMKSDAQCWELYEEM 251
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G + T+ IL C +V++ KM E+ +D D + LI+ ++ + R+
Sbjct: 252 GRIGVHSNAYTFNILTYVLCRDGDVNKINGFLEKMEEEGFDPDVVTYNTLIDSYVRRGRL 311
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
A+ L +++ + + P ++ +L+ L R+ EA L M + P
Sbjct: 312 EDAF-YLYKIMYRRGVMPDLVSYTSLMRGLCRLGRVREAHQLFHRMIDRGMDPDVVLYNT 370
Query: 552 FVQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K G +++A L + + + +P S + E + EGR A +L+
Sbjct: 371 LIGAYCKDGMLQEARSLLHEMIGIGIHPDSFTCRILVEGYGREGRLISALNLV 423
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
P +AL R + + N +TYN ++ V+ +++ EM+ + G + TY
Sbjct: 504 PARALELLRQMP-----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 558
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +++AVK+F E + G KP + L+ D L++R ++
Sbjct: 559 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR--DR 616
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR EA ++++ M G PD TY+ +I G CK G
Sbjct: 617 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 676
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI +V F + + + D L +
Sbjct: 677 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 736
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L R++EA L+ M ++
Sbjct: 737 LINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 795
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G V+DA + K + P+ Y + + G+ +A
Sbjct: 796 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 855
Query: 600 KDLL 603
++++
Sbjct: 856 ENMV 859
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G TYN ++ L + + +VEEM +G D+ TY + K ++ A
Sbjct: 621 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 680
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANK 363
+++FE M + +V + L+ ++S PDL L
Sbjct: 681 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL------- 733
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y +L NS S S G D A ++M M+ PD++TY+ ++ GLC GR
Sbjct: 734 YNALINSHSTS------------GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 781
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++DEM E G PD+ T+ LI G+ +V AL +MM K ++ +
Sbjct: 782 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 841
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
LI G + + A ++ EM+E + P +T+ +LIE L
Sbjct: 842 LIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLIEGL 881
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ + +V+ + E M + G + TY + K +++
Sbjct: 656 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 715
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ + +P + + L+ S S+ N D F + + E + Y+ +
Sbjct: 716 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR--AFEIMGEMEKKRIAPDDVTYNTLM 773
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L LGR DEA K++ M G +PD +TY+ +I G G +DA + +EM G
Sbjct: 774 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 833
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
P + T+ LIQG C + D A +M+E D LI G ++
Sbjct: 834 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 884
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A ++
Sbjct: 486 LCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDI 541
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGF 488
+ EM E G I P+ T+ +I G C VD A+ F +M+ K +A + + LI G+
Sbjct: 542 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 601
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q +++ A M+E+ + AT+ L+ L R EA L+ M + P
Sbjct: 602 CDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 659
>gi|297806669|ref|XP_002871218.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317055|gb|EFH47477.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1029
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 163/368 (44%), Gaps = 36/368 (9%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW+ + + LE + ++ + V+ VL+ +I L FF WVG+ +GYKHN+ YN +
Sbjct: 625 DWE-RTQEALEKLTVQFTPELVVEVLRNAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 683
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V + + ++ EM+++G + DT+ + Q+ + + A++ F+ M D
Sbjct: 684 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 743
Query: 334 PS------------------VQDCSLLLRS-ISSINNPD-------LGLVFRVANKYE-- 365
PS V++ + R I S PD LG + V N +
Sbjct: 744 PSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 803
Query: 366 SLGNSLSK------SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
S +SL K Y RAL+++G+ +EA + + + D TY ++ GL
Sbjct: 804 SCLDSLGKIGFPVPVAYSIYIRALSRIGKLEEALSELASFEGDRSLLDQYTYGSIVHGLL 863
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ G A + ++ M+E G P + +T LI + ++ L KM E++ +
Sbjct: 864 QRGDLHKALDKVNSMKEIGIKPGVHVYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVV 923
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+I G++S +V A+K IE+ P T+ I L A + E+A+ LL
Sbjct: 924 TYTAMICGYMSLGKVEEAWKAF-RNIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSE 982
Query: 540 MKKQNYPP 547
M + P
Sbjct: 983 MLDKGIAP 990
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 159/361 (44%), Gaps = 10/361 (2%)
Query: 190 HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKA 249
G+++++ V + VV D + +LE + V VLK P A
Sbjct: 112 QKGLLEKVDFSPVVHQITSVVRADDEIVSMEDRLEILSFRFEPEIVENVLKRCFKVPHLA 171
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
+ FF WV G+ H YN +L + ++ +V+EM+K + DI T+ +
Sbjct: 172 MRFFNWVKLKDGFSHRVGIYNTMLSIAGEARNLDMVDELVKEMEKHACDKDIRTWTILIS 231
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-- 367
+ K + + + +FE M ++ ++++RS+ DL L F Y+ +
Sbjct: 232 VYGKAKKIGKGLLVFEKMRKSGFELDAAAYNIMIRSLCIAGRGDLALEF-----YKEMME 286
Query: 368 -GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + Y + + K + D + + M ++ + ++ C +G+ ++
Sbjct: 287 KGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKE 346
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ E++ D K + IL++G C AN + AL M + D D+++ ++I+
Sbjct: 347 ALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIIS 405
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G+L Q V+ A + E+I+K P +T+ ++++L ++ E+ NL M +
Sbjct: 406 GYLRQNDVSKALEQF-EIIKKSGRPPRVSTYTEIMQQLFKLKQFEKGCNLFSEMIESGIE 464
Query: 547 P 547
P
Sbjct: 465 P 465
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 177/453 (39%), Gaps = 82/453 (18%)
Query: 58 QKIFFSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFN 117
+K+ FS + ++ A D +E++LE LS + E V VL++ P A FFN
Sbjct: 117 EKVDFSPVVHQITSVVRADDEIVSMEDRLEILSFRFEPEIVENVLKRCFKVPHLAMRFFN 176
Query: 118 WVCDKKQFRPSSTVYSLML------RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
WV K F +Y+ ML RNL D L ++ M++ C + T+ ++
Sbjct: 177 WVKLKDGFSHRVGIYNTMLSIAGEARNLDMVDEL------VKEMEKHACDKDIRTWTILI 230
Query: 172 GVLKKAKKAS----------------DLAALN----------------QFHDGMV-KEIA 198
V KAKK D AA N +F+ M+ K I
Sbjct: 231 SVYGKAKKIGKGLLVFEKMRKSGFELDAAAYNIMIRSLCIAGRGDLALEFYKEMMEKGIT 290
Query: 199 MD-NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVG 257
K L+D + S+ D + +DM +RI +
Sbjct: 291 FGLRTYKMLLDCIAKSEKVDVVQSIADDM---------------VRICEI---------S 326
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
EH + + +L+ +++ ++ E+K + +D + + + + M
Sbjct: 327 EHDAFGY-------LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRM 379
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISS-INNPDLGLVFRVANKYESLGNSLSKSVY 376
DA+++ + M + + D ++ IS + D+ + G S Y
Sbjct: 380 VDALEIVDIMK----RRKLDDSNVYGIIISGYLRQNDVSKALEQFEIIKKSGRPPRVSTY 435
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I + L KL +F++ + M +G EPD++ + V+ G R +A V MEE
Sbjct: 436 TEIMQQLFKLKQFEKGCNLFSEMIESGIEPDSVAITAVVAGHLGQNRVAEAWKVFGSMEE 495
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
G P K+++I ++ C ++ D + F +M
Sbjct: 496 KGIKPTWKSYSIFMKELCRSSRYDEIITLFNQM 528
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/401 (21%), Positives = 162/401 (40%), Gaps = 42/401 (10%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
DW + + LE+L+ + T E VV VLR FF+WV + ++ +S Y++ +
Sbjct: 625 DW-ERTQEALEKLTVQFTPELVVEVLRNAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 683
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
+ KQ M+ C I ++T+ + +++ + A+ F + +K+
Sbjct: 684 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTW--AIMIMQYGRTGLTNIAIRTFKE--MKD 739
Query: 197 IAM---DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
+ + + K L+ V+ +K G+ +E+ A F
Sbjct: 740 MGLIPSSSTFKCLITVLC-----EKKGRNVEE-----------------------ATKTF 771
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
R + SG+ + L L + +D + ++ + K G+ + + I I R +
Sbjct: 772 REM-IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVPVAYSIYI-RALSR 829
Query: 314 FRMMEDAV-KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
+E+A+ +L F D S++ + DL N + +G
Sbjct: 830 IGKLEEALSELASFEGDRSLLDQYTYGSIVH---GLLQRGDLHKALDKVNSMKEIGIKPG 886
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
VY + K +F++ + MK EP +TY+ +I G G+ E+A
Sbjct: 887 VHVYTSLIVHFFKEKQFEKVLETCHKMKEESCEPSVVTYTAMICGYMSLGKVEEAWKAFR 946
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+EE G PD KT++ I C A + + AL ++M++K
Sbjct: 947 NIEEKGTSPDFKTYSKFINCLCQAGKSEDALKLLSEMLDKG 987
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 125/348 (35%), Gaps = 74/348 (21%)
Query: 281 SVRD--FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM----MDGPYKP 334
++RD F V+ M+K G + ID +I +Q + + EFM ++ +P
Sbjct: 534 AIRDDIFSWVISSMEKNGEKEKIDLIKEIQKQCNAYNQELNGSGKAEFMQKELVNKYNRP 593
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
V S L + S+++ D+ + V + S ++ AL KL E
Sbjct: 594 QVVQQSALPPASSAVDKMDVQEICHVLS---------SSRDWERTQEALEKLTVQFTPEL 644
Query: 395 MMKAMKNA------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+++ ++NA G++ ++ Y+ I F+ ++ EM
Sbjct: 645 VVEVLRNAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRR 704
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC+ TW I+I + + A+ F +M +
Sbjct: 705 QGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKD------------------------- 739
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLL--GARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ L P +TFK LI L R +EEA R M + + P E
Sbjct: 740 -----------MGLIPSSSTFKCLITVLCEKKGRNVEEATKTFREMIRSGFVPDRELVQD 788
Query: 555 YIS---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
Y+ + G +DA L +L +P AY + G+ EA
Sbjct: 789 YLGCLCEVGNTKDAKSCLDSLGKIGFPVPVAYSIYIRALSRIGKLEEA 836
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 145/321 (45%), Gaps = 6/321 (1%)
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
IE+S++ V +L + ALG FRW G GYKH Y+ ++ +L + + +
Sbjct: 36 IEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYDMMVDILGKMKQMDQMRE 95
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++EEM + + + ++T K R+F EDAV++F+ + + + + +LLL ++
Sbjct: 96 LLEEMNR-NHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGTFGLEKNAESMNLLLDTLC 154
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ + K L N+ + +++ IH K DEA ++ MK F P
Sbjct: 155 KEGKVEQARAIFLELKSHILPNAHTFNIF--IH-GWCKANLVDEAHWTLQEMKGHAFRPC 211
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+YS +I C+ F +LDEME GC P++ T+T +I + + AL
Sbjct: 212 VISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQ 271
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M D + LI R A + + + + +T+ ++I L
Sbjct: 272 RMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHH 331
Query: 528 RRLEEAMNLLRLMKKQNYPPF 548
+ +A++LLR M + PF
Sbjct: 332 GHVSKALSLLREM--ETSAPF 350
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 106/267 (39%), Gaps = 41/267 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
++ I+Y+ I+ R + + +++EM+ +G ++ TY I K + E+A
Sbjct: 207 AFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVFLAKSQNTEEA 266
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L + M KP ++ +
Sbjct: 267 LQLTQRMKSAGCKPDT-------------------------------------PFFNSLI 289
Query: 381 RALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + GRF EA + K M NAG D TY+ +I LC G A ++L EME +
Sbjct: 290 YILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETSAP 349
Query: 440 IP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGFLSQKRVNGA 497
D +T+ L++ +++ M++K+ D +LI+G + A
Sbjct: 350 FKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWA 409
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKL 524
Y L EMI K + P T L+E++
Sbjct: 410 YHLFEEMISK-DIVPKYQTCHMLLEEV 435
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 85/199 (42%), Gaps = 9/199 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TY I+ LA+ ++ + + + MK G + D + + +
Sbjct: 239 EAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRF 298
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS----LSK 373
++AV +FE M P +D S I+ + + G V + + + S L
Sbjct: 299 QEAVDVFEKEM--PNAGVSRDTSTYNSMIAMLCHH--GHVSKALSLLREMETSAPFKLDG 354
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
+ + ++ + G + +++ M K D Y+ +I GLC+A + + A ++ +
Sbjct: 355 QTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFE 414
Query: 433 EMEENGCIPDIKTWTILIQ 451
EM +P +T +L++
Sbjct: 415 EMISKDIVPKYQTCHMLLE 433
>gi|297805886|ref|XP_002870827.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316663|gb|EFH47086.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 582
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 173/393 (44%), Gaps = 29/393 (7%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY-----PVKALGFFRWV 256
+A+++ VL +W + + K++ L + + V+ EL +Y P + F+ W
Sbjct: 13 IAQSICATVLKGNWKNILKHKVDSGL--LKSSIITQVISELSLYSGYGGPSLSWSFYSWT 70
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK------------------EGYE 298
KH+ + ++ +L +H + +++++ + E E
Sbjct: 71 DSLPSCKHSLQSSWKMILILTKHNHFKTAHQLLDKLSQRELLSSPLVLRSLVGGVSEDPE 130
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+ + + + K M+ D++ +FE +M KP +Q C++LL S+ D V+
Sbjct: 131 VLSHVFSWLMIFYAKSGMINDSIAVFEQIMSCGLKPHLQACTVLLNSLVKERLTDT--VW 188
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
++ K LG + VY+ + A +K G ++AEK++ M+ G PD TY+ +I
Sbjct: 189 KIFKKMVKLGVVANIHVYNVLVHACSKSGDSEKAEKLLSEMEEKGVFPDIFTYNTLISVY 248
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK +A +V D ME +G PDI T+ LI G + A F K ++ A+
Sbjct: 249 CKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRMREATRLFRK-IKGVVMANH 307
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
LI+G+ ++ A +L E++E P T+ +++ KL R+ EA LL
Sbjct: 308 VTYTTLIDGYCRMNDIDEALRLR-EVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLT 366
Query: 539 LMKKQNYPPFPEPFVQYISKFGTVEDASEFLKA 571
M + P I+ + +ED +K
Sbjct: 367 EMSVKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 4/287 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + TYN ++ V + + +V + M++ G DI TY + F + M
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPDIVTYNSLIHGFSREGRM 289
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A +LF + G + + L+ +N+ D L R+ ES G Y+
Sbjct: 290 REATRLFR-KIKGVVMANHVTYTTLIDGYCRMNDIDEAL--RLREVMESRGFCPGVVTYN 346
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I R L + GR EA +++ M EPDNIT + +I CK A V +M E+
Sbjct: 347 SILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIES 406
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G D+ ++ LI G C E+D A M+EK L++GF +Q + +
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEI 466
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
K L E EK L P A ++ LI ++ +++ A L M+K+
Sbjct: 467 TK-LPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFESMEKKG 512
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 96/236 (40%), Gaps = 2/236 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY ++ R + + + E M+ G+ + TY I R+ + + +A +L
Sbjct: 306 NHVTYTTLIDGYCRMNDIDEALRLREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLL 365
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M +P C+ L+ + I D+ +V K G L Y +
Sbjct: 366 TEMSVKKIEPDNITCNTLINAYCKIE--DMVSAVKVKKKMIESGLKLDMYSYKALIHGFC 423
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+ D A++ + +M G P YS ++ G + ++ + +E E+ G PD+
Sbjct: 424 KVLELDNAKEELFSMIEKGLSPGYSAYSWLVDGFYNQNKQDEITKLPEEFEKRGLCPDVA 483
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ LI+ C +VD A + F M +K D+ + + + +V A L
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLMGDSVIYTTMAYAYWRTGKVTDASAL 539
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 37/244 (15%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYI 305
R V E G+ +TYN ILR L +R+ ++ EM + E D I+ Y
Sbjct: 329 LREVMESRGFCPGVVTYNSILRKLCEDGRIREANRLLTEMSVKKIEPDNITCNTLINAYC 388
Query: 306 KISRQFQ----KFRMMEDAVKLFEF------------------------MMDGPYKPSVQ 337
KI K +M+E +KL + M++ P
Sbjct: 389 KIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELDNAKEELFSMIEKGLSPGYS 448
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
S L+ + N D + ++ ++E G ++Y G+ R + KL + D A+ + +
Sbjct: 449 AYSWLVDGFYNQNKQD--EITKLPEEFEKRGLCPDVALYRGLIRRICKLEQVDYAKVLFE 506
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
+M+ G D++ Y+ + + + G+ DA + D M + ++K + L + N
Sbjct: 507 SMEKKGLMGDSVIYTTMAYAYWRTGKVTDASALFDVMYNRRLMVNLKLYKSLSASYAGDN 566
Query: 458 EVDR 461
+V R
Sbjct: 567 DVLR 570
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 150/363 (41%), Gaps = 58/363 (15%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S N + Y+ I+ L + D N+ EM+++G D+ TY
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F DA +L + M++ R IS PD+
Sbjct: 296 MIVGFCSSGRWSDAEQLLQEMLE--------------RKIS----PDV------------ 325
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EA ++ M G P+ ITY+ +I G CK R +
Sbjct: 326 -------VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 378
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC PD+ T+T LI G+C A +D + +M + A+ + LI+
Sbjct: 379 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 438
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A L +MI + P T TL++ L +L++A+ + + M+K
Sbjct: 439 GFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK---- 493
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
SK DAS + P Y + NEG+ EA++L +
Sbjct: 494 ----------SKMDL--DASHPFNGVE----PDVLTYNILICGLINEGKFLEAEELYEEM 537
Query: 607 PHH 609
PH
Sbjct: 538 PHR 540
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 14/288 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+ ++ + + D ++ EM + G + TY + F + A
Sbjct: 390 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
+ L + M+ P + C+ LL + +N L + + L S
Sbjct: 450 LDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDALEMFKAMQKSKMDLDASHPFNGV 507
Query: 375 -----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A
Sbjct: 508 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ M P++ T+ LI G+C A VD L F +M + ADA + LI GF
Sbjct: 568 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 627
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ LE A+ +L
Sbjct: 628 KVGNINGALDIFQEMISS-GVYPDTITIRNMLTGFWSKEELERAVAML 674
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 129/305 (42%), Gaps = 12/305 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ F + + +EDA+ LF M+ PSV D L+ + + PDL V + K
Sbjct: 48 LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDL--VISLYQKM 105
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E ++ + + + A + G PD +T++ ++ GLC R
Sbjct: 106 ERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRV 165
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A + +M E C P++ T+T L+ G C + A+ +MME +
Sbjct: 166 SEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTI 225
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G + A LL +M E + P + +I+ L R +A NL M+++
Sbjct: 226 VDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKG 285
Query: 545 YPPFPEPF------VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
FP+ F V + S G DA + L+ L K P Y + +F EG+ +
Sbjct: 286 I--FPDLFTYNSMIVGFCSS-GRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342
Query: 598 EAKDL 602
EA +L
Sbjct: 343 EAAEL 347
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 203/496 (40%), Gaps = 55/496 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
RP+ ++ ++ L + + + L RM ED + TY +I+ G+ KK S L
Sbjct: 181 RPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALN 240
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + M+ V+ + +VV+ S D + K D + + N + T ++E I
Sbjct: 241 LLRK----------MEEVSHIIPNVVIYSAIIDSLCK---DGRHSDAQN-LFTEMQEKGI 286
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+P + TYN ++ D +++EM + D+ TY
Sbjct: 287 FP------------------DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVAN 362
+ F K +A +L++ M+ P+ + ++ + D + + +A
Sbjct: 329 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 388
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K S ++ DG A R D+ +++ M G + +TY+ +I G C G
Sbjct: 389 KGCSPDVFTFTTLIDGYCGA----KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVG 444
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA---- 478
A ++ +M +G PDI T L+ G C ++ AL F M + D DA
Sbjct: 445 DLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPF 504
Query: 479 -----DLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
D+L ++LI G +++ + A +L EM + + P T+ ++I+ L RL+
Sbjct: 505 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHR-GIVPDTITYSSMIDGLCKQSRLD 563
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA-AYLQVF 587
EA + M +++ P F I+ + G V+D E + + + A Y+ +
Sbjct: 564 EATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLI 623
Query: 588 ESFFNEGRHYEAKDLL 603
F G A D+
Sbjct: 624 YGFRKVGNINGALDIF 639
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 19/258 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ + ++ ++M G DI T + ++DA
Sbjct: 425 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 484
Query: 321 VKLFEFM----MD----GPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-- 367
+++F+ M MD P+ +P V ++L+ + IN G YE +
Sbjct: 485 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL--INE---GKFLEAEELYEEMPH 539
Query: 368 -GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G Y + L K R DEA +M +M + F P+ +T++ +I G CKAGR +D
Sbjct: 540 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 599
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ EM G + D + LI G ++ AL F +M+ D + ++
Sbjct: 600 GLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLT 659
Query: 487 GFLSQKRVNGAYKLLVEM 504
GF S++ + A +L ++
Sbjct: 660 GFWSKEELERAVAMLEDL 677
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 37/204 (18%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + +TYN ++ L + + EEM G D TY + K +++
Sbjct: 505 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 564
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M + P+V + L+ N Y
Sbjct: 565 ATQMFVSMGSKSFSPNVVTFNTLI------------------NGY--------------- 591
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G D I Y +I+G K G A ++ EM +G
Sbjct: 592 ----CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 647
Query: 440 IPDIKTWTILIQGHCAANEVDRAL 463
PD T ++ G + E++RA+
Sbjct: 648 YPDTITIRNMLTGFWSKEELERAV 671
>gi|224080263|ref|XP_002306075.1| predicted protein [Populus trichocarpa]
gi|222849039|gb|EEE86586.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 119/247 (48%), Gaps = 5/247 (2%)
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+P+V + L+ + N ++ +V + ++ E G + Y + + GR EA
Sbjct: 244 RPNVHSFNELM--VGFYRNGEVEMVEEIWSEMERFGCVANGFSYGVLIAVFCEGGRLSEA 301
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
E++ M+ G PD + Y+ +I G CKAG E A + EM +G T+ LI+G
Sbjct: 302 ERLWDEMRVKGIMPDVVAYNTIIGGFCKAGEVEKAEGLFREMGLSGIESSCVTFEHLIEG 361
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+C +V+ A+L + M +++ +A ++VLI G QKRV A K++ + V P
Sbjct: 362 YCRIGDVNSAILVYKDMRRRDFRLEALTMEVLIGGLCEQKRVFEALKIMRSAMRDVSFHP 421
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFL 569
+++ LI L ++EEA+ L M + + P F++ K G E A+
Sbjct: 422 NGKSYELLINGLCEDGKMEEALKLQSEMVGKGFDPNSAIYGAFIEGYVKLGNEEMAAMLR 481
Query: 570 KALSVKE 576
K +SV +
Sbjct: 482 KEMSVAQ 488
>gi|302763057|ref|XP_002964950.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
gi|300167183|gb|EFJ33788.1| hypothetical protein SELMODRAFT_406577 [Selaginella moellendorffii]
Length = 464
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 164/364 (45%), Gaps = 22/364 (6%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P AL FF+W+ + Y NT+ YN +L L + + +++ + TY
Sbjct: 78 PDAALAFFQWLTREACYNPNTVAYNCLLNTLVKAGRIYQVREMLDRKTLGEFVHSEFTYG 137
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPS--VQDCSLLLRSISSINNPDLGLVFRVANK 363
+ ++A +L E D P V SL+L+ S L + R
Sbjct: 138 TLVHGHCLAGEFDEAKRLVEEFKDTGMSPGSLVVLHSLMLKGFS---EAGLAMAKR---- 190
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G + ++ Y+ + R L+K G DEA +M M++AGF +T++ V+ LCK+GR
Sbjct: 191 ----GVAPNRVAYNAMARGLSKAGLLDEAFDLMGVMESAGFALTAVTFNPVVEFLCKSGR 246
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++AC V++ M P+I T +++Q A + AL M+E + +
Sbjct: 247 PDEACKVMETMLLRNIEPNILTLNLILQ----AARPEEALGMTDVMVEMGFCPTIVTFNA 302
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+ F + +++ A +LL E + + + +P T+ +++K R+ EA L +
Sbjct: 303 LLELFCNTDQMDSATELL-ETMARSKCKPNFVTYSIMVQKFAEMGRMVEARAFLEQLVVC 361
Query: 544 NYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
Y P +V + K G ++ AS FL ++ + ++A Y + E F GR EA
Sbjct: 362 GYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEEGCRANTATYNSLVEGFCKLGRMDEA 421
Query: 600 KDLL 603
+ +L
Sbjct: 422 ERVL 425
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 176/422 (41%), Gaps = 50/422 (11%)
Query: 82 LENKLEELSPKLT----HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
LE++L ++ + H +V +L+K DP+ A AFF W+ + + P++ Y+ +L
Sbjct: 48 LESRLIQVGSRAAFQGLHFAVCKILQK-TKDPDAALAFFQWLTREACYNPNTVAYNCLLN 106
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKAKK--------ASDL 183
LV + Q L R E TY +++ G +AK+
Sbjct: 107 TLVKAGRIYQVREMLDRKTLGEFVHSEFTYGTLVHGHCLAGEFDEAKRLVEEFKDTGMSP 166
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
+L H M+K + +A V + + + L + L + F L + E
Sbjct: 167 GSLVVLHSLMLKGFSEAGLAMAKRGVAPNRVAYNAMARGLSKAGL-LDEAFDLMGVMESA 225
Query: 244 IYPVKALGFFRWVG--EHSG----------------YKHNTITYNGILRVLARHESVRDF 285
+ + A+ F V SG + N +T N IL+ AR E
Sbjct: 226 GFALTAVTFNPVVEFLCKSGRPDEACKVMETMLLRNIEPNILTLNLILQA-ARPEEALGM 284
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+V+ EM G+ I T+ + F M+ A +L E M KP+ S++++
Sbjct: 285 TDVMVEM---GFCPTIVTFNALLELFCNTDQMDSATELLETMARSKCKPNFVTYSIMVQK 341
Query: 346 ISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ ++G + E L G + + V + L K G D A + + M
Sbjct: 342 FA-----EMGRMVEARAFLEQLVVCGYAPNLLVCNAYVAGLCKTGEMDLASRFLTVMAEE 396
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + TY+ ++ G CK GR ++A VL+EM G +PD T+ +LIQG C+A +++ A
Sbjct: 397 GCRANTATYNSLVEGFCKLGRMDEAERVLEEMIAEGSLPDSTTYNVLIQGLCSAGQIEHA 456
Query: 463 LL 464
+
Sbjct: 457 FM 458
>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
Length = 1037
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 23/338 (6%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---HESVRDFW 286
SD+ V VL+ LR+ P +LGFF++V + ++ N +Y ++ +L+R ++ R +
Sbjct: 66 FSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL 125
Query: 287 NVVEEMKKEGYEMDI--DTYIKISRQF----QKFRMM----------EDAVKLFEFMMDG 330
N + ++ K ++ D + + R+F F M+ ++A+ +F+ M
Sbjct: 126 NQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 185
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
PS++ C+ LL ++ + N + V + +G + + A K G+ D
Sbjct: 186 GRIPSLRSCNSLLNNL--VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA +K M+N G EP+ +TY +I G G E A VL M E G ++ T+T+LI
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303
Query: 451 QGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+G+C ++D A M E+ D VLI+G+ +++ A +LL EM+ ++
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG 362
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+ +LI + EA ++ M N P
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 31/304 (10%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ L + + + +++ EM G +I TY + + K M++ A + M
Sbjct: 580 YNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639
Query: 329 DGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKY---ESLG 368
+ ++ CS ++ + + PD + +Y + +
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699
Query: 369 NSLSKS----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+SL +S VY+ L K G+ D+A + + GF PDN TY +I G
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
AG ++A + DEM G +P+I T+ LI G C + VDRA F K+ +K +
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ LI+G+ ++ A+KL +MIE+ + P T+ LI L +E +M LL
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEE-GISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 539 LMKK 542
M K
Sbjct: 879 QMIK 882
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 57/382 (14%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K ++ +YN +L R + +N+ ++M +EG E + TY + + + +DA++
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKS--VYDG 378
++ MM P S LL + + N F A+ + L +KS ++
Sbjct: 459 IWHLMMKXGVAPDEVGYSTLLDGLFKMEN------FEGASTLWKDILARGFTKSRITFNT 512
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY--------------------------- 411
+ L K+G+ EAE++ MK+ G PD ITY
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREX 572
Query: 412 --------SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ +I GL K+ R + ++L EM G P+I T+ LI G C +D+A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT---- 519
+ +M E A+ + +++G R++ A L+ +M++ + K+
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692
Query: 520 -LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY- 577
I+K+ A L+E+ L Y + + K G V+DA F LS+K +
Sbjct: 693 AAIQKI--ADSLDESCKTFLLPNNIVY----NIAIAGLCKTGKVDDARRFFSMLSLKGFV 746
Query: 578 PSSAAYLQVFESFFNEGRHYEA 599
P + Y + + G EA
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEA 768
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 9/361 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A GF + + E+ G + N +TY+ ++ V V++ M ++G ++ TY +
Sbjct: 244 EAAGFVKKM-ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302
Query: 308 SRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K M++A K+ M + P + +L+ D + R+ ++
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV--RLLDEMLR 360
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG + + + + K G EAE ++ M + +PD+ +Y+ ++ G C+ G +
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A N+ D+M + G P + T+ L++G C D AL + MM+ D L++
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLD 480
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + GA L +++ + + + TF T+I L ++ EA + MK
Sbjct: 481 GLFKMENFEGASTLWKDILARGFTKS-RITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNEGRHYEAKDL 602
P + I + + + K E PS Y + F R E DL
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDL 599
Query: 603 L 603
L
Sbjct: 600 L 600
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 75/160 (46%), Gaps = 2/160 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA + F + + P L+ S+ N D FR+ ++ G + Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA--FRLRDEMLRRGLVPNIVTY 787
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K D A+++ + G P+ +TY+ +I G CK G + A + D+M E
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G P + T++ LI G C +++R++ +M++ D+
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDS 887
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 2/188 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N I YN + L + V D + +G+ D TY + + +++A +L
Sbjct: 713 NNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLR 772
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+ P++ + L+ + N D R+ +K G + Y+ +
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQ--RLFHKLHQKGLFPNVVTYNTLIDGYC 830
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+G D A K+ M G P +TYS +I GLCK G E + +L++M + G +
Sbjct: 831 KIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLI 890
Query: 445 TWTILIQG 452
+ L+QG
Sbjct: 891 EYCTLVQG 898
>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 603
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 109/488 (22%), Positives = 212/488 (43%), Gaps = 43/488 (8%)
Query: 93 LTHESVVYVLRKLDNDPEKAS--AFFNWVCDKKQFRPSSTVYSLMLRNLV-NKDSLKQFW 149
LTHE V V+ L +D +FF+W +FR +Y + +L+ N++S K
Sbjct: 77 LTHEQAVSVVASLASDAGSMVTLSFFHWAIGYPKFRHFMRLYIVCAMSLIGNRNSEKACE 136
Query: 150 VT---------LRRMKEDHCYIEEETYLSILGVLKKAK------KASDLAALNQFHDGMV 194
V + R+KE +E + G++ + K + L ++ + +
Sbjct: 137 VMRCMVESFSEVGRLKEA---VEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLF 193
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLED---MKIELSDNFVL------TVLKEL--R 243
+E+ + V + + KIG LE + + L FV+ ++ +
Sbjct: 194 EEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGK 253
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
Y +AL +FR + + G + N I + ++ L + S++ + ++EEM +G++ ++ T
Sbjct: 254 GYTTRALWYFRRLVDM-GLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYT 312
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSIS---SINNPDLGLVFR 359
+ + K E A +LF + + +KP+V + ++ +N ++ L
Sbjct: 313 HTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLL--- 369
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + G + + Y + K G F+ A +M M + GF P+ TY+ ++ GLC
Sbjct: 370 --SRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLC 427
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K GR ++A +L++ +NG PD T+ IL+ HC + +AL F KM++ D
Sbjct: 428 KRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIH 487
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
LI F + R+ + ++ E ++ + P T+ ++I L AM
Sbjct: 488 SYTTLIAVFCRENRMKES-EMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHR 546
Query: 540 MKKQNYPP 547
+ P
Sbjct: 547 LSDHGCAP 554
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF---------------------------- 416
K+G EA+K + M GF DN T++ +I
Sbjct: 217 KIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLI 276
Query: 417 -------GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
GLCK G + A +L+EM G P++ T T LI G C ++A F K+
Sbjct: 277 NFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKL 336
Query: 470 ME-KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
+ +N+ + +I+G+ + ++N A LL M E+ L P T+ TLI+ A
Sbjct: 337 VRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQ-GLVPNTNTYTTLIDGHCKAG 395
Query: 529 RLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
E A +L+ LM + + P V + K G V++A + L+
Sbjct: 396 NFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 106/230 (46%), Gaps = 6/230 (2%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I + +++G + AE + + M G +PD+I+Y ++ CK G +A L M E G
Sbjct: 176 IIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEADKWLSVMLERG 235
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D T+T++I RAL F ++++ + + +I G + + A+
Sbjct: 236 FVVDNATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAF 295
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKKQNYPPFPEPFVQYIS 557
++L EM+ K +P T +LI+ L E+A L L+L++ +N+ P + IS
Sbjct: 296 EMLEEMVGK-GWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMIS 354
Query: 558 KFGTVEDASEFLKALS-VKE---YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + LS +KE P++ Y + + G A DL+
Sbjct: 355 GYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM 404
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN I+ L + V++ + ++E+ + G + D TY + + K + A
Sbjct: 411 GFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQENIRQA 470
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ LF M+ +P + + L+ N + + F A + +G + Y +
Sbjct: 471 LALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVR---IGIIPTNKTYTSM 527
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ G A K + + G PD+ITY +I GLCK + ++A ++ D M E G
Sbjct: 528 ICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIEKGL 587
Query: 440 IPDIKTWTILIQGHC 454
+P T L +C
Sbjct: 588 VPCEVTRITLAYEYC 602
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 69/330 (20%), Positives = 124/330 (37%), Gaps = 41/330 (12%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
TH S++ L K EKA F + + +P+ Y+ M+ +D L + + L
Sbjct: 312 THTSLIDGLCK-KGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLS 370
Query: 154 RMKEDHCYIEEETYLSILGVLKKA---KKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
RMKE TY +++ KA ++A DL L +G + N +V+ +
Sbjct: 371 RMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMS-SEGFSPNLCTYN---AIVNGL 426
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
+ K LED G +G K + TYN
Sbjct: 427 CKRGRVQEAYKMLED-------------------------------GFQNGLKPDKFTYN 455
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++ + E++R + +M K G + DI +Y + F + M+++ FE +
Sbjct: 456 ILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRI 515
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P+ + + ++ +L L + ++ G + Y I L K + D
Sbjct: 516 GIIPTNKTYTSMI--CGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRD 573
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
EA + +M G P +T + + CK
Sbjct: 574 EARSLYDSMIEKGLVPCEVTRITLAYEYCK 603
>gi|77556780|gb|ABA99576.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 696
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 121/533 (22%), Positives = 221/533 (41%), Gaps = 97/533 (18%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDL 183
RPS+ VY+ ++ V ++ ++ ++M D C + TY S++ GV ++ +
Sbjct: 184 LRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAV 243
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
+V+++ + + + + D G+ E ++ L +KE
Sbjct: 244 R--------LVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRM-------LDKMKEKG 288
Query: 244 IYPVKAL------GFFR-------------WVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ P +A G FR W+G H H + + +L L++ + ++
Sbjct: 289 VAPSEATYRTLVHGVFRCLERDKAYRMLSDWLG-HETSLHPSACHT-MLYCLSKKDMAKE 346
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ M GY +D + + K + D +L + + P ++++
Sbjct: 347 AVEFEKRMSARGYLLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIK 406
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKA 398
S+ + N F AN Y LG+ + K + Y+ + K G D+AE+++K
Sbjct: 407 SLLNCKN------FSKANHY--LGHMVLKGLLSSVMSYNMVIDCFVKAGAVDKAEEIVKE 458
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M++ GF P+ +T++ +I G K G +A VL + E+G +PDI T+T LI G C ++
Sbjct: 459 MQDKGFLPNLVTFNTLISGYSKLGNVHNAKVVLKMLMEHGFMPDIITFTSLIDGLCNTHQ 518
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEKV--------- 508
+D A +CF +M E +A +VL++ S VN A LL +M I+ V
Sbjct: 519 LDDAFVCFEEMAEWGVRPNAQTYNVLMHTLCSAGHVNKAIDLLNKMKIDGVTPDAYSFNA 578
Query: 509 ------RLR------------------PWQATFKTLIEKLLGARRLEEAMNLLRLMKK-- 542
R+R P T+ +LI+ L RR+ +A +L ++
Sbjct: 579 LILSFCRMRKVDKAEDIFNDMVRFGVVPDSYTYNSLIKALCDERRVNKAKEILFARERSG 638
Query: 543 ------QNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
Q+Y P V ++K G +A E + + SS Q ES
Sbjct: 639 CSTSNNQSY----WPIVAALAKMGQFSEAGELMDKYLSRNAQSSCGSNQSIES 687
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 7/231 (3%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S +VY+ + A + G D A + M G PD+ TY+ ++ G+C+ G ++
Sbjct: 182 LGLRPSTAVYNALIAASVRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDE 241
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +ME G P++ T+T+L+ G C A V+ A KM EK L++
Sbjct: 242 AVRLVRQMEGEGIRPNVFTYTMLVDGFCNAGRVEEAFRMLDKMKEKGVAPSEATYRTLVH 301
Query: 487 GFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G + AY++L + + + L P + T++ L +EA+ + M + Y
Sbjct: 302 GVFRCLERDKAYRMLSDWLGHETSLHP--SACHTMLYCLSKKDMAKEAVEFEKRMSARGY 359
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFN 592
F +S K V D E L + + P Y+ V +S N
Sbjct: 360 LLDSTAFGIVMSCALKCLEVSDLCELLDSFIKNGGNPGFDVYIMVIKSLLN 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 100/222 (45%), Gaps = 4/222 (1%)
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
R+ + G +S+ + + + +LG A ++ M G P Y+ +I
Sbjct: 139 RLVAEVRGCGCEVSEELVCALVESWGRLGLARYAHEVFVQMPRLGLRPSTAVYNALIAAS 198
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+AG + A +M +GC PD T+ L+ G C VD A+ +M + +
Sbjct: 199 VRAGAVDTAYLRFQQMPADGCRPDHFTYNSLVHGVCRRGIVDEAVRLVRQMEGEGIRPNV 258
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+L++GF + RV A+++L +M EK + P +AT++TL+ + ++A +L
Sbjct: 259 FTYTMLVDGFCNAGRVEEAFRMLDKMKEK-GVAPSEATYRTLVHGVFRCLERDKAYRMLS 317
Query: 539 ---LMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY 577
+ +P + +SK ++A EF K +S + Y
Sbjct: 318 DWLGHETSLHPSACHTMLYCLSKKDMAKEAVEFEKRMSARGY 359
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 112/497 (22%), Positives = 210/497 (42%), Gaps = 72/497 (14%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
A+ F++ + ++ P+ + ++++ L + + LR M + C Y +++
Sbjct: 196 ANVFYDML--SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLI 253
Query: 172 GVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI---GKKLEDM 226
L K + ++ L F G V + A+T DV+LG D+I K + M
Sbjct: 254 HSLSKCNRVNEALQLLEEMFLMGCVPD------AETFNDVILGLCKFDRINEAAKMVNRM 307
Query: 227 KI------ELSDNFVLTVLKEL-RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
I +++ +++ L ++ R+ K L F+R K ++ +N ++ H
Sbjct: 308 LIRGFTPDDITYGYLMNGLCKIGRVDAAKDL-FYRIP------KPTSVIFNTLIHGFVTH 360
Query: 280 ESVRDFWNVVEEMKKE-GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ D V+ +M G D+ TY + + K ++ A+++ M + KP+V
Sbjct: 361 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYS 420
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
++L+ DG KLG+ DEA ++
Sbjct: 421 YTILV---------------------------------DG----FCKLGKIDEAYNLLNE 443
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G +P+ + ++ +I CK R +A + EM GC PD+ T+ LI G C +E
Sbjct: 444 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 503
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ AL M+ + A+ + LIN FL + + A KL+ EM+ + L + T+
Sbjct: 504 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLD-EITYN 562
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKALSVK 575
+LI+ L A +++A +L M + P + + + G VE+A EF K + ++
Sbjct: 563 SLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLR 622
Query: 576 EYPSSAAYLQVFESFFN 592
S + F S N
Sbjct: 623 ---GSTPDIVTFNSLIN 636
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/416 (22%), Positives = 174/416 (41%), Gaps = 48/416 (11%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
F L L EL + ++ F W G GY+H+ Y ++ L + + ++ +MK
Sbjct: 73 FQLCKLLELPLDVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMK 132
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINN 351
EG +I I R + K +L M Y +P+ + +++L + S
Sbjct: 133 DEGIVFKESLFISIMRDYDKAGFPGQTTRLM-LEMRNVYSCEPTFKSYNVVLEILVS--- 188
Query: 352 PDLGLVFRVANK--YESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G +VA Y+ L + +++ + +AL + D A +++ M G P+
Sbjct: 189 ---GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPN 245
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++ Y +I L K R +A +L+EM GC+PD +T+ +I G C + ++ A
Sbjct: 246 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 305
Query: 468 KMMEKNY--------------------DADADL-----------LDVLINGFLSQKRVNG 496
+M+ + + DA DL + LI+GF++ R++
Sbjct: 306 RMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDD 365
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A +L +M+ + P T+ +LI + A+ +LR M+ + P + V
Sbjct: 366 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILV 425
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
K G +++A L +S P++ + + +F E R EA ++ + P
Sbjct: 426 DGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 481
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 100/201 (49%), Gaps = 2/201 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ R +++ +V EM +G +D TY + + + ++ A
Sbjct: 518 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKA 577
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LFE M+ PS C++L+ + + + F+ + G++ ++ +
Sbjct: 578 RSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQ--KEMVLRGSTPDIVTFNSLI 635
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + GR ++ M + ++ G PD +TY+ ++ LCK G DAC +LDE E+G +
Sbjct: 636 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFV 695
Query: 441 PDIKTWTILIQGHCAANEVDR 461
P+ +TW+IL+Q +DR
Sbjct: 696 PNDRTWSILLQSLVPQETLDR 716
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 5/272 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K NT+ +N ++ + + + + EM ++G + D+ T+ + + ++ A
Sbjct: 448 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 507
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M+ + + L+ + + ++ ++ N+ G+ L + Y+ +
Sbjct: 508 LWLLRDMISEGVVANTVTYNTLINAF--LRRGEIKEARKLVNEMVFQGSLLDEITYNSLI 565
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L + G D+A + + M G P +I+ + +I GLC++G E+A EM G
Sbjct: 566 KGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGST 625
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C A ++ L F K+ + D + L++ V A L
Sbjct: 626 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLL 685
Query: 501 LVEMIEKVRL---RPWQATFKTLIEKLLGARR 529
L E IE + R W ++L+ + RR
Sbjct: 686 LDEGIEDGFVPNDRTWSILLQSLVPQETLDRR 717
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ RD ++ + DT K+
Sbjct: 40 ASAVFATILETKGTQRSDIYVFSGLITAYLESGFXRDAIECYRLTREHKLWVPFDTCRKV 99
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 100 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 157
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 158 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 217
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G IP+ T+T LI G C VD A+ + +M+ ++ D + LI G
Sbjct: 218 NELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYG 277
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 278 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 336
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 337 DDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLL 396
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 158 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 217
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 218 NELFDEMLVKGLIPNGVTFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLI--TYNTLI 275
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 276 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 335
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ + D ++IN F + V KL
Sbjct: 336 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKL 395
Query: 501 LVEM 504
L EM
Sbjct: 396 LKEM 399
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 74/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 267 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT------------------ 308
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 309 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYTALISGLC 349
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + +PD TY+ +I CK G +L EM+ +G P +
Sbjct: 350 QEGRSVDAEKMLREMLSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVV 409
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 410 TYNVLMNG 417
>gi|449477018|ref|XP_004154904.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 567
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 169/371 (45%), Gaps = 25/371 (6%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---H 279
L ++ S+ + VL+ LR+ P +L FF+ + ++ + +Y I+ +L+R +
Sbjct: 89 LANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMY 148
Query: 280 ESVRDFWNVVEEMKKEGYEMDI--DTYIKISRQFQ--------------KFRMMEDAVKL 323
+ VR + N + + K Y D + + R+F + M + A+ +
Sbjct: 149 KEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVYAEKGMTKFALCV 208
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F+ M PS++ C+ LL ++ + N + V + +LG Y + A
Sbjct: 209 FDNMGKCGRVPSLRSCNSLLSNL--VQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K GR DEA +K M+ + EP+ +TY+ +I G G A VL M E G +
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T+T+LI+G+C ++++A F MMEKN D + VLI+ + + RV+ A ++
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE 563
M+ KV L+ +LI + +A +L MK N P + + F E
Sbjct: 387 ML-KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQE 445
Query: 564 DASEFLKALSV 574
D F+KA +
Sbjct: 446 D---FIKAFKL 453
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 205/532 (38%), Gaps = 67/532 (12%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
+ L LS ++E + VLR L +P+ + FF + +FRP + Y ++ L
Sbjct: 87 DALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHIL---- 142
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
+ RM Y E YL+ L VL K
Sbjct: 143 -------SRARM-----YKEVRVYLNELVVLCKN-------------------------- 164
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE-LRIYPVK-----ALGFFRWVG 257
+ + + WD+ + E +F TV L++Y K AL F +G
Sbjct: 165 ----NYIASAVWDELVSVYREF-------SFSPTVFDMILKVYAEKGMTKFALCVFDNMG 213
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + + N +L L ++ V E+M G DI +Y + + K +
Sbjct: 214 K-CGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRV 272
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A + M +P+V + L+ S+ D+ +V G + Y
Sbjct: 273 DEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLG--DVCGAKKVLALMSEKGIPENSRTYT 330
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K G+ ++AEK+ M D Y +I C AGR +DA + D M +
Sbjct: 331 LLIKGYCKRGQMEQAEKLFGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKV 390
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + LI G+C V++A M + N D+ + L++GF Q+ A
Sbjct: 391 GLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKA 450
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+KL EM K + T+ TL++ L +E A+++ LM K+ P + +
Sbjct: 451 FKLCDEMHNK-GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLD 509
Query: 558 KF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F GT + A K ALS S Y + F + +A+++ K
Sbjct: 510 AFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561
>gi|302758538|ref|XP_002962692.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
gi|300169553|gb|EFJ36155.1| hypothetical protein SELMODRAFT_62267 [Selaginella moellendorffii]
Length = 495
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/378 (23%), Positives = 161/378 (42%), Gaps = 49/378 (12%)
Query: 249 ALGFFRWVGEHSGYKHNTI----TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
A+G R + K N + TY ++ L R V++ +++ +E+ G+ +Y
Sbjct: 2 AIGVLREM-----QKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSY 56
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
I K+ ++AV+LFE M+ P + C +L + + ++ K
Sbjct: 57 SYIVCGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQ-DGGKMEQAIQLFRKM 115
Query: 365 ES-LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
E G + Y+ + L K R +E +M MK G EP+ +TY I GLCKAGR
Sbjct: 116 EGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTYILGLCKAGR 175
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA---------------LLCFA- 467
+DA V EM + C PD ++ILI C ++ ++CF+
Sbjct: 176 VDDAMVVKKEMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSS 235
Query: 468 -------------------KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+MME+ DA + V+++ F + V A +L+ E +++
Sbjct: 236 LVDCLDKAGRYGDAYRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRD 295
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEF 568
P + L+++++ ++E+ + LL+ M + P + + + ++A E
Sbjct: 296 LPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSYATLLRELCRRKNAVEA 355
Query: 569 LKALSVKEYPSSAAYLQV 586
L+ VKE +A Y V
Sbjct: 356 LEL--VKEM-RAAGYTSV 370
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 157/361 (43%), Gaps = 44/361 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ FR + G NT YN +L L + + V + + EMK++G E ++ TY
Sbjct: 107 QAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCTY 166
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K ++DA+ + + M+ + CS PD
Sbjct: 167 ILGLCKAGRVDDAMVVKKEMIQ-------KSCS-----------PD-------------- 194
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
VY + A K+G+ E EK++ M +PD + +S ++ L KAGR+ DA
Sbjct: 195 -----NVVYSILINAFCKVGKIYEGEKLLAEMLEKKLQPDVVCFSSLVDCLDKAGRYGDA 249
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD-ADADLLDVLIN 486
+ M E GC PD ++++ EV +AL + ++++ A ++ L+
Sbjct: 250 YRLFRRMMEQGCKPDAVIASVILDSFTKRGEVAQALELVNEFVDRDLPLPSAGSINQLVK 309
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+ +V +LL M + RP Q ++ TL+ +L + EA+ L++ M+ Y
Sbjct: 310 RIVVGDKVEDGVRLLKTMASRGS-RPLQCSYATLLRELCRRKNAVEALELVKEMRAAGYT 368
Query: 547 PFP-EPFVQYISKFGTVEDAS---EFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKD 601
++ + K V++A E +K+ +E PS + Y + E EGR +AKD
Sbjct: 369 SVDLSCVIEMLCKMKMVDEARGLYEEMKSSQQQELLPSVSTYNILLERLCGEGRLGDAKD 428
Query: 602 L 602
L
Sbjct: 429 L 429
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 89/399 (22%), Positives = 173/399 (43%), Gaps = 29/399 (7%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E+A F + + P++ Y+++L L KD +++ MKE C TY +
Sbjct: 106 EQAIQLFRKMEGEYGCPPNTYAYNVLLTGLKKKDRVEEMREMFLEMKEKGCEPNLVTYCT 165
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL--EDMK 227
+ L KA + D + + + + K + DNV +++ G+KL E ++
Sbjct: 166 YILGLCKAGRVDDAMVVKK--EMIQKSCSPDNVVYSILINAFCKVGKIYEGEKLLAEMLE 223
Query: 228 IELSDNFV-----LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+L + V + L + Y A FR + E G K + + + IL + V
Sbjct: 224 KKLQPDVVCFSSLVDCLDKAGRYG-DAYRLFRRMMEQ-GCKPDAVIASVILDSFTKRGEV 281
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM---MEDAVKLFEFMMDGPYKPSVQDC 339
+V E ++ + + I++ ++ + +ED V+L + M +P
Sbjct: 282 AQALELVNEFVDR--DLPLPSAGSINQLVKRIVVGDKVEDGVRLLKTMASRGSRPLQCSY 339
Query: 340 SLLLRSISSINNP--DLGLVFRV-ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ LLR + N L LV + A Y S+ S + L K+ DEA +
Sbjct: 340 ATLLRELCRRKNAVEALELVKEMRAAGYTSVDLSC-------VIEMLCKMKMVDEARGLY 392
Query: 397 KAMKNAGFE---PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ MK++ + P TY+ ++ LC GR DA ++ EM E+G IPD+ ++ IL++
Sbjct: 393 EEMKSSQQQELLPSVSTYNILLERLCGEGRLGDAKDLFQEMIESGRIPDVNSYEILVEAL 452
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
C A ++ + F +++ + +++ +++G +
Sbjct: 453 CKAGKIFQGHELFKQLISLGFIPSSEMCATIVDGLCKHQ 491
Score = 45.4 bits (106), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA VL EM++ +P++ T+ +LI+G + V A F ++ + + A A ++
Sbjct: 1 DAIGVLREMQKRNVVPELATYLMLIEGLGRDHRVKEAFDLFQEIHARGFTAKASSYSYIV 60
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ-N 544
G + A +L EMI + P + L ++E+A+ L R M+ +
Sbjct: 61 CGLAKYGYFDEAVELFEEMIRRKVAPPLGSCIGILNGYCQDGGKMEQAIQLFRKMEGEYG 120
Query: 545 YPP 547
PP
Sbjct: 121 CPP 123
>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
protein [Medicago truncatula]
Length = 970
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 155/353 (43%), Gaps = 8/353 (2%)
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
W+ E + + + +TYN ++ L + V + V + ++++G + D+ TY + F +
Sbjct: 243 WM-ESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRV 301
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ +D + L M++ + P+ S L+ + N D + + K G +
Sbjct: 302 QQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSA--YDLVVKLGRFGFLPNLF 359
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
VY+ + AL K D+AE + K M + +++TYS +I CK G + A + M
Sbjct: 360 VYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRM 419
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E+G I + LI GHC ++ A + KM+ + + A LI+G+ +V
Sbjct: 420 IEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQV 479
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
A+KL EM EK + P TF LI L + EA L M ++ P +
Sbjct: 480 EKAFKLYREMNEK-EIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNV 538
Query: 553 -VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
++ K ++ A E L+ L P + Y + + GR AKD +
Sbjct: 539 MIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFI 591
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 153/355 (43%), Gaps = 16/355 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + YN ++ + + + +M EG E T+ + + K +E A
Sbjct: 423 GIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKA 482
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL+ M + PSV + L+ + S N ++ ++ ++ ++ Y+ +
Sbjct: 483 FKLYREMNEKEIAPSVYTFTALIYGLCSTN--EMAEASKLFDEMVERKIKPTEVTYNVMI 540
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K D+A ++++ M + G PD TY +I GLC GR A + +D++ +
Sbjct: 541 EGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLK 600
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ ++ L+ G+C + AL +M+++ + D VLI+G + Q+ + + L
Sbjct: 601 LNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGL 660
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQY 555
L +M ++ LRP + ++I+ +++ L LM + FP F+
Sbjct: 661 LKKMYDQ-GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEK--CFPNVVTYTAFMNG 717
Query: 556 ISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
+ K G ++ A F K L+ P+S Y +S EG EA DL HH
Sbjct: 718 LCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL-----HH 767
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/325 (22%), Positives = 136/325 (41%), Gaps = 40/325 (12%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW---------------------N 287
AL FF ++G H H T ++ ++ L ++ + FW
Sbjct: 79 ALRFFNFLGLHKNMNHTTTSFAILVHALVQN---KLFWPANSLLHTLLLRGSDPKFVFEK 135
Query: 288 VVEEMKK------EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+E K+ G++ + +Y++ +R F DAV + M+ P V+ S
Sbjct: 136 FLESHKQCKFSSTLGFDFLVHSYLQNTRVF-------DAVVVLRLMLGNTLLPEVRTLSA 188
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
+L + I LV+ V ++ + G + R+L +L F A++ + M++
Sbjct: 189 ILNGLLRIRK--FILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKILWMES 246
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
F+ +TY+ +I GLCK G +A V + E G D+ T+ L+ G C + D
Sbjct: 247 NRFDLSIVTYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDD 306
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
+ +M+E + + L++G + ++ AY L+V++ + P + LI
Sbjct: 307 GICLMNEMVELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKL-GRFGFLPNLFVYNALI 365
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYP 546
L L++A L + M N P
Sbjct: 366 NALCKGEDLDKAELLYKNMHSMNLP 390
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 110/240 (45%), Gaps = 10/240 (4%)
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
+ + ++ + ++++M +G D Y + + K + + + + M+ P+V
Sbjct: 650 KQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVV 709
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESL--GNSLSKSV-YDGIHRALTKLGRFDEAEK 394
+ + + + D R + +E + N SV Y +LTK G EA
Sbjct: 710 TYTAFMNGLCKVGEID-----RAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATD 764
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ M G + TY+ +I G CK GR +A VL EM ENG PD T++ +I HC
Sbjct: 765 LHHEMLK-GLLANTATYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHC 823
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+ +V A+ + M+ K + D+ ++LI G ++ A++L +M+ + L+P Q
Sbjct: 824 RSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR-GLKPRQ 882
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 94/261 (36%), Gaps = 57/261 (21%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +++ Y ++ ++ S + ++ M E ++ TY K ++ A
Sbjct: 668 GLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRA 727
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN----PDLGLVFRVANKYESLGNSLSKS-V 375
LFE M+ P+ L S++ N DL +E L L+ +
Sbjct: 728 GHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDL--------HHEMLKGLLANTAT 779
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + R KLGR EA K++ M G PD ITYS +I+ C++G A + D M
Sbjct: 780 YNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTML 839
Query: 436 ENGCIPDIKTWTILI--------------------------------------------Q 451
G PD + +LI
Sbjct: 840 RKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMH 899
Query: 452 GHCAANEVDRALLCFAKMMEK 472
G C EVD AL + M+ +
Sbjct: 900 GGCVTGEVDTALRLYHSMLTR 920
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 6/290 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF-QKFRMM 317
H+G +T TY ++ L V + ++++ K+ +++ Y + + + R+
Sbjct: 561 HNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLT 620
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E E + G V C +L ++ D+ +F + K G +Y
Sbjct: 621 EALSASCEMIQRGINMDLV--CHAVLID-GAMKQQDMKRLFGLLKKMYDQGLRPDSVIYT 677
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ A +K G F ++ + + M P+ +TY+ + GLCK G + A ++ ++M
Sbjct: 678 SMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTA 737
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P+ T+ + + A +M+ K A+ ++LI GF R+ A
Sbjct: 738 NISPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEA 796
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
K+L EM E + P T+ T+I + + + A+ L M ++ P
Sbjct: 797 TKVLSEMTEN-GIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEP 845
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F V E G + + I ++G++ +RD ++ + DT K+
Sbjct: 35 ASAVFAAVLETXGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKV 94
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 95 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 152
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + + A
Sbjct: 153 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 212
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 213 NGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 272
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 273 LCKKGDLKQAHDLIDEMSMK-GLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 331
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 332 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLL 391
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+ A
Sbjct: 153 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGA 212
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 213 NGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 270
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 271 YGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 330
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D +++N F + V KL
Sbjct: 331 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKL 390
Query: 501 LVEM 504
L EM
Sbjct: 391 LKEM 394
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 262 DLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTT------------------ 303
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 304 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYTALISGLC 344
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD TY+ ++ CK G +L EM+ +G P +
Sbjct: 345 QEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVV 404
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 405 TYNVLMNG 412
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 2/228 (0%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + TY+ ++ L + + + +EM +G + T+ + K ++
Sbjct: 187 SGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 246
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+++++ M+ P + + L+ + DL + ++ G K Y +
Sbjct: 247 AMEIYKQMLSQSLLPDLITYNTLIYGLC--KKGDLKQAHDLIDEMSMKGLKPDKFTYTTL 304
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G D A + K M D++ Y+ +I GLC+ GR DA +L EM G
Sbjct: 305 IDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 364
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
PD T+T+++ C +V + +M + +VL+NG
Sbjct: 365 KPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 155/369 (42%), Gaps = 43/369 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L+++ + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +++EM ++G + + TY ++ + + + +A+ +F M + KP
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + ++ G S Y I L K G A
Sbjct: 433 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 393 EKMM-----------------------------------KAMKNAGFEPDNITYSQVIFG 417
K+ + M+NAGFEPD +TYS V+
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L G E+A V EM++ IPD + +L+ A V++A + M+ +
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPN 608
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ L++ FL ++ AY+LL M+ + LRP T+ L+ R +
Sbjct: 609 VPTCNSLLSTFLRVNKIAEAYELLQNML-ALGLRPSLQTYTLLLSCCTDGRSKLDMGYCG 667
Query: 538 RLMKKQNYP 546
+LM +P
Sbjct: 668 QLMASTGHP 676
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +A NV ++M+E GC PD
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M D V+IN + A+KL
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+++ P T+ +++ AR + A+ L R M+ + P
Sbjct: 494 EMVDQ-GCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEP 537
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 133/337 (39%), Gaps = 55/337 (16%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR----------- 126
W E L+ L ++ VL+++ ND A FF W+ + F+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 127 ------------------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
P++ Y+ ++ + + L + +M+E C
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ TY +++ + KA A++ + ++ D +++ LG K
Sbjct: 433 DRVTYCTLIDIHAKAGFLD--IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 223 LEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
L ++ ++ N ++ + + R Y AL +R + +++G++ + +TY+ ++ V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ-SALKLYRDM-QNAGFEPDKVTYSIVMEV 548
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + V EM+++ + D Y + + K +E A + ++ M+ P+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLLPN 608
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V C+ LL + +N ++A YE L N L+
Sbjct: 609 VPTCNSLLSTFLRVN--------KIAEAYELLQNMLA 637
>gi|356502394|ref|XP_003520004.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 525
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 150/370 (40%), Gaps = 33/370 (8%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVE--EMKKEGYEMDIDTYIKISRQFQKFR 315
E GY+ N+ T+ I+ L + + +E E + G+++ I Y I K
Sbjct: 104 EDMGYESNSYTHGTIINGLCKVGDTAGAISYLEKIEGRNRGFDLLI-AYSTIMDSLCKDG 162
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
M+ A+ F M +P + + L+ + S R LGN + K +
Sbjct: 163 MLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFG--------RWNEATTLLGNMMRKGI 214
Query: 376 YDGIHR------ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
+ K G+ A+ +M M + G EPD +TY+ VI G C + DA
Sbjct: 215 MPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDAVK 274
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
V + M G +P++ T++ LI G C +++A+ +M+ + D LI GF
Sbjct: 275 VFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFC 334
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
R A +L M E +L P T +++ L + EA++L R M+K N
Sbjct: 335 KAGRPEAAIELFCTMHEHHQL-PNLQTCAIILDGLFKCQFHSEAISLFRKMEKMN---LE 390
Query: 550 EPFVQY------ISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDL 602
V Y + FG DA E L K AY + + EG +A+DL
Sbjct: 391 LNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDL 450
Query: 603 LYK-----CP 607
L K CP
Sbjct: 451 LMKMEENGCP 460
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 127/247 (51%), Gaps = 7/247 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G N +TY+ ++ + ++ V++EM G +D+ T+ + F K E
Sbjct: 281 HKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPE 340
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVY 376
A++LF M + P++Q C+++L + ++ + L FR K E + L+ Y
Sbjct: 341 AAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISL-FR---KMEKMNLELNIVTY 396
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + G+F++A ++ + + G + D + Y+ +I GLCK G +DA ++L +MEE
Sbjct: 397 NIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEE 456
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NGC P+ T+ +L++G ++ R+ M K ADA ++LI+ + S + N
Sbjct: 457 NGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTELLIS-YFSANKENS 515
Query: 497 AYKLLVE 503
A ++ ++
Sbjct: 516 ALQVFLQ 522
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 149/374 (39%), Gaps = 47/374 (12%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I Y+ I+ L + + N M +G + D+ Y + F +A L
Sbjct: 149 IAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCSFGRWNEATTLLGN 208
Query: 327 MMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
MM P+VQ ++L+ + I+ + F V +G Y+ +
Sbjct: 209 MMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMV-----HVGVEPDVVTYNSVISGH 263
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
L + ++A K+ + M + G P+ +TYS +I G CK A VLDEM NG D+
Sbjct: 264 CLLSQMNDAVKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDV 323
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEK----NYDADADLLD----------------- 482
TW+ LI G C A + A+ F M E N A +LD
Sbjct: 324 VTWSTLIGGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRK 383
Query: 483 --------------VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
++++G S + N A +L + K ++ + T+I+ L
Sbjct: 384 MEKMNLELNIVTYNIVLDGMCSFGKFNDARELFSCLPSK-GIQIDVVAYTTMIKGLCKEG 442
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
L++A +LL M++ PP + V+ + + + ++++L + K + A +
Sbjct: 443 LLDDAEDLLMKMEENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKGLSADATTTE 502
Query: 586 VFESFFNEGRHYEA 599
+ S+F+ + A
Sbjct: 503 LLISYFSANKENSA 516
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 17/324 (5%)
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
DL A N G+ N A TL LG+ I ++ + L DNF KE
Sbjct: 182 DLVAYNSLIHGLC-SFGRWNEATTL----LGNMMRKGIMPNVQTFNV-LVDNFC----KE 231
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+I K + F H G + + +TYN ++ + D V E M +G ++
Sbjct: 232 GKISRAKTIMCFMV---HVGVEPDVVTYNSVISGHCLLSQMNDAVKVFELMIHKGLLPNV 288
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRV 360
TY + + K R + A+ + + M++ V S L+ P+ + +F
Sbjct: 289 VTYSSLIHGWCKTRNINKAIFVLDEMVNNGLNLDVVTWSTLIGGFCKAGRPEAAIELFCT 348
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+++ L N + ++ I L K EA + + M+ E + +TY+ V+ G+C
Sbjct: 349 MHEHHQLPNLQTCAI---ILDGLFKCQFHSEAISLFRKMEKMNLELNIVTYNIVLDGMCS 405
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G+F DA + + G D+ +T +I+G C +D A KM E +
Sbjct: 406 FGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDLLMKMEENGCPPNEFT 465
Query: 481 LDVLINGFLSQKRVNGAYKLLVEM 504
+VL+ G L + ++ + K L+ M
Sbjct: 466 YNVLVRGLLQRYDISRSTKYLMLM 489
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 119/284 (41%), Gaps = 3/284 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N T+N ++ + + ++ M G E D+ TY + M DA
Sbjct: 213 GIMPNVQTFNVLVDNFCKEGKISRAKTIMCFMVHVGVEPDVVTYNSVISGHCLLSQMNDA 272
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
VK+FE M+ P+V S L+ N + + V ++ + G +L + +
Sbjct: 273 VKVFELMIHKGLLPNVVTYSSLIHGWCKTRNINKAIF--VLDEMVNNGLNLDVVTWSTLI 330
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K GR + A ++ M P+ T + ++ GL K +A ++ +ME+
Sbjct: 331 GGFCKAGRPEAAIELFCTMHEHHQLPNLQTCAIILDGLFKCQFHSEAISLFRKMEKMNLE 390
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+I T+ I++ G C+ + + A F+ + K D +I G + ++ A L
Sbjct: 391 LNIVTYNIVLDGMCSFGKFNDARELFSCLPSKGIQIDVVAYTTMIKGLCKEGLLDDAEDL 450
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L++M E+ P + T+ L+ LL + + L LMK +
Sbjct: 451 LMKM-EENGCPPNEFTYNVLVRGLLQRYDISRSTKYLMLMKGKG 493
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 91/226 (40%), Gaps = 4/226 (1%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K+ + A ++K + G +PD T + VI LC +VL M + G P
Sbjct: 16 VIVKMKHYATAISLIKHTYSLGVKPDVHTLTIVINCLCHLKHTVFGFSVLGAMFKIGVEP 75
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T+ LI G CA V A + + Y++++ +ING GA L
Sbjct: 76 TVVTFATLINGLCAEGNVGAAARFADSLEDMGYESNSYTHGTIINGLCKVGDTAGAISYL 135
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISK 558
++ + R + T+++ L L A+N M + P + +
Sbjct: 136 EKIEGRNRGFDLLIAYSTIMDSLCKDGMLCLALNFFSGMTCKGIQPDLVAYNSLIHGLCS 195
Query: 559 FGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
FG +A+ L + K P+ + + ++F EG+ AK ++
Sbjct: 196 FGRWNEATTLLGNMMRKGIMPNVQTFNVLVDNFCKEGKISRAKTIM 241
>gi|242048586|ref|XP_002462039.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
gi|241925416|gb|EER98560.1| hypothetical protein SORBIDRAFT_02g013138 [Sorghum bicolor]
Length = 798
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 139/334 (41%), Gaps = 42/334 (12%)
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISR 309
F R GE G + T YN +LRVL V + M G + TY +
Sbjct: 159 AFSRMEGEF-GCRPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMD 217
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
K DA+KLF+ M+ P+V+ ++LL S+ N L + N E G
Sbjct: 218 GLCKRGTAVDALKLFDEMLQRGITPNVKTHTILLSSMC--NAGQLKEAENLLNSMEDKGC 275
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG-------------------------- 403
+ Y+ L K GR DEA + ++A++ G
Sbjct: 276 PPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGF 335
Query: 404 -----------FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
F PD + Y+ +I G +AGR +DA DEM+E PD + L++
Sbjct: 336 QCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLKA 395
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
C + ++D A ++M + N D + ++I+G ++ V+ A ++ M+E V P
Sbjct: 396 LCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVE-VGCHP 454
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
T+ LI+ L A RLEEA L M+ N P
Sbjct: 455 TVMTYNVLIDGLYRAHRLEEARMLFYKMEVGNNP 488
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
L + N+ + G +++ Y+ + L K G +A K+ M G P+ T++ ++
Sbjct: 192 LALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQRGITPNVKTHTILL 251
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL------------ 463
+C AG+ ++A N+L+ ME+ GC PD T+ + G C A VD A+
Sbjct: 252 SSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTF 311
Query: 464 ------------------------LCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGAY 498
C+ +++E+ ++ D L ++I G R++ A+
Sbjct: 312 VLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTIMIRGCAEAGRIDDAF 371
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQY 555
EM EK R P + TL++ L + L+ A +L+ M + N +
Sbjct: 372 AFFDEMKEK-RFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHG 430
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K V++A + + V +P+ Y + + + R EA+ L YK
Sbjct: 431 LCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYK 481
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/470 (19%), Positives = 197/470 (41%), Gaps = 68/470 (14%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ P+ ++++L ++ N LK+ L M++ C +E TY + L L KA +
Sbjct: 237 QRGITPNVKTHTILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVD 296
Query: 182 D-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM-KIELSDNFVLTVL 239
+ + L + + + + + L +++ +E + + + S + VL +
Sbjct: 297 EAIERLEALRRTGTFVLGLKGYSCLIDGLFLAGRYEEGFQCYMEVLEQADFSPDIVLYTI 356
Query: 240 ------KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ RI A FF + E + +T YN +L+ L + +++ EM
Sbjct: 357 MIRGCAEAGRID--DAFAFFDEMKEKR-FTPDTFCYNTLLKALCDSGDLDGARSLMSEMA 413
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+ +D +T+ + K +++++A+++F+ M++ P+V ++L+
Sbjct: 414 QNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHPTVMTYNVLI---------- 463
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP------- 406
DG++RA R +EA + M+ G P
Sbjct: 464 -----------------------DGLYRA----HRLEEARMLFYKME-VGNNPSLFLRLT 495
Query: 407 -------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
D+ + +++ +C++G+ A +L + ++G +PD+ T+ L+ G C +
Sbjct: 496 LGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMDSGVVPDVVTYNTLLNGLCKVRNL 555
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
D AL F ++ K + D LI+ L R N A L +++ + P + + +
Sbjct: 556 DGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDILH-IGGTPSLSIYNS 614
Query: 520 LIEKLLGARRLEEAMNLL--RLMKKQNYPPFPEPFVQYISKF--GTVEDA 565
++ L +L +A+N L+KK N E KF G++++A
Sbjct: 615 IMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEEGSLDEA 664
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 144/388 (37%), Gaps = 84/388 (21%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTL-RRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP++ VY+ +LR LV + + L RM C TY ++ L K A D
Sbjct: 170 RPTTFVYNAVLRVLVASGGVVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVD-- 227
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
AL F D M++ NV KT ++L S + K+ E++ + D
Sbjct: 228 ALKLF-DEMLQRGITPNV-KTHT-ILLSSMCNAGQLKEAENLLNSMEDK----------- 273
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK--------EG 296
G + +TYN L L + V + +E +++ +G
Sbjct: 274 ----------------GCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRRTGTFVLGLKG 317
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
Y ID R + F+ + ++ +F +PD+ L
Sbjct: 318 YSCLIDGLFLAGRYEEGFQCYMEVLEQADF------------------------SPDIVL 353
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
Y + R + GR D+A MK F PD Y+ ++
Sbjct: 354 -------------------YTIMIRGCAEAGRIDDAFAFFDEMKEKRFTPDTFCYNTLLK 394
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LC +G + A +++ EM +N + D T TI+I G C VD A+ F M+E
Sbjct: 395 ALCDSGDLDGARSLMSEMAQNNVVLDTNTHTIMIHGLCKKQLVDEAMQVFDGMVEVGCHP 454
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEM 504
+VLI+G R+ A L +M
Sbjct: 455 TVMTYNVLIDGLYRAHRLEEARMLFYKM 482
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 8/207 (3%)
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME-ENGCIPDIKTWTILIQGHCAANE 458
+ AG +P + +IF AGR +A + ME E GC P + +++ A+
Sbjct: 129 QAAGLQPPAAAFEALIFAHASAGRHHEAVDAFSRMEGEFGCRPTTFVYNAVLRVLVASGG 188
Query: 459 V-DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
V AL + +M+ + +VL++G + A KL EM+++ + P T
Sbjct: 189 VVPLALALYNRMVAAGCLPNRATYNVLMDGLCKRGTAVDALKLFDEMLQR-GITPNVKTH 247
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL-- 572
L+ + A +L+EA NLL M+ + PP F+ + K G V++A E L+AL
Sbjct: 248 TILLSSMCNAGQLKEAENLLNSMEDKGCPPDEVTYNAFLSGLCKAGRVDEAIERLEALRR 307
Query: 573 SVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ Y + + F GR+ E
Sbjct: 308 TGTFVLGLKGYSCLIDGLFLAGRYEEG 334
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 179/428 (41%), Gaps = 46/428 (10%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
+ A AFF+ + +K+F P + Y+ +L+ L + L + M +++ ++ T+
Sbjct: 368 DDAFAFFDEM-KEKRFTPDTFCYNTLLKALCDSGDLDGARSLMSEMAQNNVVLDTNTHTI 426
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK-KLEDMKI 228
++ L K K+ D A Q DGMV E+ T ++ G ++ + ++ K+
Sbjct: 427 MIHGLCK-KQLVDEAM--QVFDGMV-EVGCHPTVMTYNVLIDGLYRAHRLEEARMLFYKM 482
Query: 229 ELSDNFVLTVLKELRIYPVK--------------------ALGFFRWVGEHSGYKHNTIT 268
E+ +N L + L VK A R + + SG + +T
Sbjct: 483 EVGNNPSLFLRLTLGANQVKDSESLQKLVDSMCQSGQVLKAYKLLRGIMD-SGVVPDVVT 541
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN +L L + ++ + E++ +G+ +D TY + + DA+ LF+ ++
Sbjct: 542 YNTLLNGLCKVRNLDGALRLFRELQVKGFSLDEITYGTLIDSLLRAHRYNDAMTLFQDIL 601
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
PS+ + ++RS+ +N + F + + S V + + G
Sbjct: 602 HIGGTPSLSIYNSIMRSLCRMNKLSQAINFWFDHLLKKYNLSAQDEVIASARKKFEE-GS 660
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
DEA + + + ++ Y+ + GL +A R +DA + +EE+G I
Sbjct: 661 LDEAVRELIKIDQEYGSVNSCPYTIWLIGLIQARRIDDALKIFHILEESG---------I 711
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING-FLSQKRVNGAYKLLVEMIEK 507
I C A+ LC+ EKN D+ D++ +N F+ + V +LL + +
Sbjct: 712 DITPACCAHL--SKYLCW----EKNLDSAVDVMLYTLNKRFIMSRHVGN--RLLSSLCIR 763
Query: 508 VRLRPWQA 515
R + QA
Sbjct: 764 HRRKDAQA 771
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE-----------------S 281
L L + P AL F W+ +KHN +Y ++ +L E S
Sbjct: 33 LFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNS 92
Query: 282 VRDFWNVVE---EMKKEG-----YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
VRD VV+ M+K Y++ Y + +F ++E+ +L+ M++
Sbjct: 93 VRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVS 152
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYES----LGNSLSKSVYDGIHRALTKLGRF 389
P + + L+ LG V A +Y + G Y +
Sbjct: 153 PDIYTFNTLVNGYCK-----LGYVVE-AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV 206
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D A K+ K M G + ++Y+Q+I+GL +A + ++A ++L +M+++ C P+++T+T+L
Sbjct: 207 DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVL 266
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C + + A+ F +M E D + VLI F S ++ A LL M+E
Sbjct: 267 IDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN-G 325
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L P T+ LI K + + +AM LL M +QN P
Sbjct: 326 LMPNVITYNALI-KGFCKKNVHKAMGLLSKMLEQNLVP 362
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 101/459 (22%), Positives = 186/459 (40%), Gaps = 70/459 (15%)
Query: 70 LELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSS 129
+ + L C + E + ++S S V L L+ DP+ A +F +W+ F+ +
Sbjct: 1 MPITLNCLRTKLAEQSISKISYPFYTPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNV 60
Query: 130 TVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF 189
T Y+ ++ L +++ I E + ++K D + F
Sbjct: 61 TSYASLVTLLCSQE------------------IPYEVPKITILMIKSCNSVRDALFVVDF 102
Query: 190 HDGMVK----EI-------AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
M K EI +N+ +L L + + LED+ F V
Sbjct: 103 CRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLV 162
Query: 239 LKELRI-YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
++ Y V+A + W+ + +G + TY + R + V + V +EM + G
Sbjct: 163 NGYCKLGYVVEAKQYVTWLIQ-AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGC 221
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+ +Y ++ + + +++A+ L M D P+V+ ++L+
Sbjct: 222 HRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID------------- 268
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
AL G+ EA + K M +G +PD+ Y+ +I
Sbjct: 269 ------------------------ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQS 304
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
C ++A +L+ M ENG +P++ T+ LI+G C N V +A+ +KM+E+N D
Sbjct: 305 FCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPD 363
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ LI G S ++ AY+LL ++E+ L P Q T
Sbjct: 364 LITYNTLIAGQCSSGNLDSAYRLL-SLMEESGLVPNQRT 401
>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 576
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 161/371 (43%), Gaps = 48/371 (12%)
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+++ Y+ ++K + K +A+ E M+ YKP V C+ L++ + +
Sbjct: 69 QQQHYDFRDTHHMKALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRT 128
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ + RV E G+ S + Y+ + + RFD A +++ MK GF PD +TY+
Sbjct: 129 EKAV--RVMEILEQYGDPDSFA-YNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYN 185
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I LC G+ + A V+D++ E+ C P + T+TILI+ +D A+ +MM +
Sbjct: 186 ILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSR 245
Query: 473 NYDADADLLDVLINGFLSQKRVNGAY--------------------------------KL 500
D +V++ G + V+ A+ +L
Sbjct: 246 GLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERL 305
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYIS 557
+ +MI K P T+ LI L + EA+++LR+MK++ P +P +
Sbjct: 306 MSDMIVK-GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFC 364
Query: 558 KFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK-----CPHHIR 611
K G V+ A F+ +S P Y + S +GR EA ++ K CP +
Sbjct: 365 KEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNA- 423
Query: 612 QDSKISLLFGS 622
S + +FG+
Sbjct: 424 --SSYNTMFGA 432
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 138/330 (41%), Gaps = 41/330 (12%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
ITY ++ H S+ D +++EM G + D+ TY I R K +++ A FE
Sbjct: 216 VITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRA---FE 272
Query: 326 FMMDGPYKPS----------------------------VQDC-------SLLLRSISSIN 350
F+ + PS V+ C S+L+ S+
Sbjct: 273 FVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLC--R 330
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ G V + G + YD + A K G+ D A + M +AG+ PD +
Sbjct: 331 DGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLPDIVN 390
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++ LCK GR ++A N+ ++EE GC P+ ++ + ++ + RAL +M+
Sbjct: 391 YNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEML 450
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
D D + LI+ V+ A LLV+M E+ +P ++ ++ L A R+
Sbjct: 451 SNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDM-ERTEWQPTVISYNIVLLGLCKAHRI 509
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
+A+ +L +M P + + G
Sbjct: 510 VDAIEVLAVMVDNGCQPNETTYTLLVEGVG 539
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/285 (24%), Positives = 128/285 (44%), Gaps = 24/285 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N +TY+ ++ L R + +V+ MK++G D Y + F K ++ A
Sbjct: 313 GCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLA 372
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ + P + + + ++ S+ D L + K E +G + S Y+ +
Sbjct: 373 IGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEAL--NIFKKLEEVGCPPNASSYNTMF 430
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL G A M+ M + G +PD ITY+ +I LC+ G ++A +L +ME
Sbjct: 431 GALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQ 490
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + ++ I++ G C A+ + A+ A M++ NG + Y L
Sbjct: 491 PTVISYNIVLLGLCKAHRIVDAIEVLAVMVD--------------NGCQPNET---TYTL 533
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
LV E V W++ L + L+ + + +L R ++KQN+
Sbjct: 534 LV---EGVGYAGWRSYAVELAKSLVSMNAISQ--DLFRRLQKQNH 573
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 171/384 (44%), Gaps = 29/384 (7%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF---WNVVE 290
F L L EL + ++ F+ G GY H T++ ++ + +V DF +++
Sbjct: 67 FQLCKLLELPLDIPTSMELFQRAGAQKGYSH---TFDACYLLIDKLGAVGDFKVIEKLLK 123
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK--PSVQDCSLLLRSISS 348
+MK EG +I I + + K + A +L M G Y P+ + +++L +
Sbjct: 124 QMKDEGLLFKESLFILIMKHYGKAGLPGQATRLL-LDMWGVYSCDPTFKSYNVVLDILVD 182
Query: 349 INNPDLGLVFRVANK--YESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ P RVA Y+ L +S +VY + +AL + D A +++ M G
Sbjct: 183 GDCP------RVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGC 236
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P+++ Y +I LC+ R +A +L++M C PD++T+ +I G C A + A
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAK 296
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M+ + + DA L++G +V+ A LL ++ P + TLI
Sbjct: 297 LLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIP-----NPNTVLYNTLISGY 351
Query: 525 LGARRLEEAMNLL-RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PS 579
+ + R EEA +LL M Y P F + + K G + A E L + K + P+
Sbjct: 352 VASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPN 411
Query: 580 SAAYLQVFESFFNEGRHYEAKDLL 603
Y + F +GR EA +++
Sbjct: 412 VITYTILINGFCKQGRLEEAAEIV 435
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 159/373 (42%), Gaps = 39/373 (10%)
Query: 261 GYKHNTITYNGILRVLARHESV---RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
G+ + +TY ++ L R V R N + Y I Y+ S +F++ + +
Sbjct: 305 GFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYNTLISGYVA-SGRFEEAKDL 363
Query: 318 ----------EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
E F M+DG K L+ ++ +N VA ++E
Sbjct: 364 LYNNMVIAGYEPDAYTFNIMIDGLVKKGY-----LVSALELLNE-------MVAKRFEP- 410
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N ++ ++ + K GR +EA +++ +M G + + Y+ +I LCK G E+A
Sbjct: 411 -NVITYTI---LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ EM GC PDI T+ LI G C ++++ AL + M + A+ + L++
Sbjct: 467 LQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHA 526
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLL-RLMKKQNY 545
FL + + A+KL+ EM+ R P T+ LI+ L +E+ + L ++ K +
Sbjct: 527 FLMRDSIQQAFKLVDEML--FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIF 584
Query: 546 PPFPEP--FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P + + + G V DA +FL+ + + P Y + G EA +L
Sbjct: 585 PTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNL 644
Query: 603 LYKC-PHHIRQDS 614
K IR D+
Sbjct: 645 FNKLQSEGIRPDA 657
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 125/278 (44%), Gaps = 18/278 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+ YN ++ L + ++ + + EM +G + DI T+ + K ME+A
Sbjct: 442 GLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEA 501
Query: 321 VKLFEFM-MDGPYKPSVQDCSL----LLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ L+ M ++G +V +L L+R SI F++ ++ G L
Sbjct: 502 LSLYHDMFLEGVIANTVTYNTLVHAFLMRD--SIQQ-----AFKLVDEMLFRGCPLDNIT 554
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+G+ +AL K G ++ + + M G P I+ + +I GLC+ G+ DA L +M
Sbjct: 555 YNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMI 614
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PDI T+ LI G C V A F K+ + DA + LI+ + N
Sbjct: 615 HRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFN 674
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLL-----GAR 528
A LL + ++ P + T+ LI ++ GAR
Sbjct: 675 DACLLLYKGVDS-GFIPNEVTWSILINYIVKKIPWGAR 711
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 135/348 (38%), Gaps = 76/348 (21%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY+ + T+N ++ L + + ++ EM + +E ++ TY + F K +E+
Sbjct: 371 AGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEE 430
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + + N + G SL+ Y+ +
Sbjct: 431 AAE-------------------------------------IVNSMSAKGLSLNTVGYNCL 453
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN---------- 429
AL K G +EA ++ M G +PD T++ +I GLCK + E+A +
Sbjct: 454 ICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGV 513
Query: 430 -------------------------VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
++DEM GC D T+ LI+ C V++ L
Sbjct: 514 IANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLG 573
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M+ K ++LI+G +VN A K L +MI + L P T+ +LI L
Sbjct: 574 LFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHR-GLTPDIVTYNSLINGL 632
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFL 569
++EA NL ++ + P + IS+ G DA L
Sbjct: 633 CKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLL 680
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
P +AL R + + N +TYN ++ V+ +++ EM+ + G + TY
Sbjct: 499 PARALELLRQM-----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 553
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +++AVK+F E + G KP + L+ D L++R ++
Sbjct: 554 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR--DR 611
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR EA ++++ M G PD TY+ +I G CK G
Sbjct: 612 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 671
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI +V F + + + D L +
Sbjct: 672 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 731
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L R++EA L+ M ++
Sbjct: 732 LINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 790
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G V+DA + K + P+ Y + + G+ +A
Sbjct: 791 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 850
Query: 600 KDLL 603
++++
Sbjct: 851 ENMV 854
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G TYN ++ L + + +VEEM +G D+ TY + K ++ A
Sbjct: 616 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 675
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANK 363
+++FE M + +V + L+ ++S PDL L
Sbjct: 676 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL------- 728
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y +L NS S S G D A ++M M+ PD++TY+ ++ GLC GR
Sbjct: 729 YNALINSHSTS------------GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 776
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++DEM E G PD+ T+ LI G+ +V AL +MM K ++ +
Sbjct: 777 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 836
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
LI G + + A ++ EM+E + P +T+ +LIE L
Sbjct: 837 LIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLIEGL 876
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ + +V+ + E M + G + TY + K +++
Sbjct: 651 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 710
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ + +P + + L+ S S+ N D F + + E + Y+ +
Sbjct: 711 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR--AFEIMGEMEKKRIAPDDVTYNTLM 768
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L LGR DEA K++ M G +PD +TY+ +I G G +DA + +EM G
Sbjct: 769 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 828
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
P + T+ LIQG C + D A +M+E D LI G ++
Sbjct: 829 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 879
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A ++
Sbjct: 481 LCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDI 536
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGF 488
+ EM E G I P+ T+ +I G C VD A+ F +M+ K +A + + LI G+
Sbjct: 537 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 596
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q +++ A M+E+ + AT+ L+ L R EA L+ M + P
Sbjct: 597 CDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 654
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 12/292 (4%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL R + H G + + Y ++ L V + +++EM G D++T+ +
Sbjct: 196 ALALLRGMARH-GCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYES 366
+ +A +L + MM PSV LL+ + D ++ R+
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV 314
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ N++ I LT+ G+ A ++ + M + G PD TYS ++ GLCK GRF
Sbjct: 315 MLNTV-------IRGCLTE-GKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGS 366
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LDEMEE GC P+I T++ L+ C D A +M+ K + ++ + +I
Sbjct: 367 AVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIY 426
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+++ A +L+ EM + +P T+ T+I L +EEA ++ R
Sbjct: 427 ALCKDGKLDQATRLVQEMKSQ-GCKPDICTYNTMIYHLCNNDLMEEAEHIFR 477
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 3/262 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N+ YNGI+ L + + +V+EMK +G + DI TY + +ME+A
Sbjct: 413 GFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEA 472
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F +++ + + L+ ++ GL R+A++ G L Y+G+
Sbjct: 473 EHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGL--RLASEMLLHGCQLDVISYNGLI 530
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+AL K G D + +++ M G +P+N +Y+ +I LCKAG+ DA + EM G
Sbjct: 531 KALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 590
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C AL K+ +N D ++LI+ + ++ A L
Sbjct: 591 PDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAML 650
Query: 501 LVEMIEKVRLRPWQATFKTLIE 522
L + I + P + T+ +++
Sbjct: 651 LDKAISG-GIVPNERTWGMMVQ 671
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 110/498 (22%), Positives = 204/498 (40%), Gaps = 32/498 (6%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
PS Y+++L L D + RRM D T+ L + +A D AL
Sbjct: 140 PSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAGDALAL 199
Query: 187 NQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDM-------KIELSDNFVLT 237
+ GM + + + +T++ ++ + L++M + ++ VL
Sbjct: 200 LR---GMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLVLG 256
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ R+ L R + + G + +TY +L+ L R + ++ + +
Sbjct: 257 LCGLGRVREAARL-VDRMMTQ--GCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNV 313
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
M ++T I+ K + A +L+E M P V S+L+ + + G
Sbjct: 314 VM-LNTVIRGCLTEGK---LARATELYEMMGSKGCPPDVHTYSILMHGLCKLGR--FGSA 367
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
R+ ++ E G + + Y + + + G +D+A M+ M GF ++ Y+ +I+
Sbjct: 368 VRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYA 427
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LCK G+ + A ++ EM+ GC PDI T+ +I C + ++ A F ++E+ A+
Sbjct: 428 LCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVAN 487
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ---ATFKTLIEKLLGARRLEEAM 534
+ LI+ L R +L EM+ L Q ++ LI+ L ++ +M
Sbjct: 488 GITYNTLIHALLRNGRWQEGLRLASEML----LHGCQLDVISYNGLIKALCKEGNVDRSM 543
Query: 535 NLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESF 590
LL M + P + + + K G V DA E K L+ P Y +
Sbjct: 544 ALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGL 603
Query: 591 FNEGRHYEAKDLLYKCPH 608
G + A +LL K P+
Sbjct: 604 CKVGWTHAALNLLEKLPN 621
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 156/374 (41%), Gaps = 42/374 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + N ++R + + E M +G D+ TY + K AV++
Sbjct: 312 NVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRML 371
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M + P++ S LL S D ++ + G S++ Y+GI AL
Sbjct: 372 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAM--LDQMLAKGFSMNSQGYNGIIYALC 429
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC------------------------- 419
K G+ D+A ++++ MK+ G +PD TY+ +I+ LC
Sbjct: 430 KDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGI 489
Query: 420 ----------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+ GR+++ + EM +GC D+ ++ LI+ C VDR++ +M
Sbjct: 490 TYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMALLEEM 549
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ K + ++LIN +V A +L EM+ + L P T+ TLI L
Sbjct: 550 VTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQ-GLTPDIVTYNTLINGLCKVGW 608
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYPSSAAYLQ 585
A+NLL + +N P + IS K ++DA+ L KA+S P+ +
Sbjct: 609 THAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGIVPNERTWGM 668
Query: 586 VFESFFNEGRHYEA 599
+ ++F + + E
Sbjct: 669 MVQNFVRQTVNLEG 682
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 165/361 (45%), Gaps = 25/361 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T + ++ +L + V + ++E + + G +D+ T + + + A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLG-----NSLSK 373
+LF M P+V C+ L++ + N + L + + G N++S
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S+ I L K GR DEA ++ K MK G PD I+Y+ +I G C++G+++DA + +E
Sbjct: 643 SI---IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + G PD+ T+++LI C +V A M+++ + L+ G R
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 759
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM---KKQNYPPFPE 550
++ A +L ++M +K+ P T+ TL++ L ++ A+ L + M Q F
Sbjct: 760 ISEATQLFMKM-QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 551 PFVQY------ISKFGTVEDASEF---LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
+ Y + K G ++A E +KAL V P+ +Y + F G+ +AK
Sbjct: 819 DVISYSIIIDGLCKHGREDEARELFKEMKALGV--IPNVISYTSLIHGFCRSGKLEDAKH 876
Query: 602 L 602
L
Sbjct: 877 L 877
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 155/354 (43%), Gaps = 19/354 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T + ++ +L + V + ++E M + G +DI TY + + + +A LF
Sbjct: 346 DVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLF 405
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLGNSLSKSV--YDGIH 380
M +P L++ + N ++ L + N G ++ Y I
Sbjct: 406 MSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIII 465
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R DEA ++ + MK G PD I+Y+ +I G C +G++E A + +EM + G
Sbjct: 466 DGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 525
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T ++LI C +V A ++++ D L+ G + R++ A +L
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP------PFPEPF-- 552
++M +K+ P T TL++ L + ++ A+ L + M P P +
Sbjct: 586 FLKM-QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSI 644
Query: 553 -VQYISKFGTVEDASEF---LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + K G ++A E +KAL V P +Y + F G+ +AK L
Sbjct: 645 IIDGLCKCGREDEARELFKEMKALGV--IPDVISYTSLIHGFCRSGKWKDAKYL 696
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/395 (23%), Positives = 146/395 (36%), Gaps = 59/395 (14%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K I+Y+ I+ L + + + +EMK +G D+ +Y + F E A
Sbjct: 162 KPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKC 221
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGI 379
LF M+D +P V +L+ G V E + G L Y +
Sbjct: 222 LFNEMLDVGIQPDVTTSGVLIDMFCK-----EGKVIEANELLEVMVHRGCILDIVTYSTL 276
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE-------------- 425
+ L R EA ++ +MK G PD I Y ++ GLC+ G+
Sbjct: 277 IKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTS 336
Query: 426 ----------------------------DACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
+A +L+ M + GCI DI T++ LI+G C +
Sbjct: 337 QYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEH 396
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE-----KVRLRP 512
+ A F M + DA L+ G +N A +L EM+ ++ +P
Sbjct: 397 RISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKP 456
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA-SEF 568
++ +I+ L RR +EA L MK Q P + I F G E A F
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516
Query: 569 LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L V P + + +G+ EA LL
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 551
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 144/335 (42%), Gaps = 24/335 (7%)
Query: 261 GYKHNTITYN---------GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
GY + +TY+ ++ +L + V + ++E M + G +DI TY + +
Sbjct: 40 GYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGL 99
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLGN 369
+ +A LF M +P L++ + N ++ L + N G
Sbjct: 100 CMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGI 159
Query: 370 SLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
++ Y I L K R DEA ++ K MK G PD I+Y+ +I G C +G++E A
Sbjct: 160 KCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKA 219
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +EM + G PD+ T +LI C +V A M+ + D LI G
Sbjct: 220 KCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKG 279
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM---KKQN 544
+ R++ A +L + M +K+ RP + TL++ L ++ A++L + M Q
Sbjct: 280 LCMKHRISEATQLFMSM-KKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQY 338
Query: 545 YPPFPEP-------FVQYISKFGTVEDASEFLKAL 572
P + + K G V +A+E L+ +
Sbjct: 339 GIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVM 373
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 18/240 (7%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYS---------QVIFGLCKAGRFEDACNVLD 432
L + R +E M + G+ PD +TYS +I LCK G+ +A +L+
Sbjct: 19 CLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANELLE 78
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M + GCI DI T++ LI+G C + + A F M + DA L+ G
Sbjct: 79 VMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTG 138
Query: 493 RVNGAYKLLVEMIE-----KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+N A +L EM+ ++ +P ++ +I+ L RR +EA L + MK Q P
Sbjct: 139 NINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMP 198
Query: 548 FPEPFVQYISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I F G E A F + L V P + + F EG+ EA +LL
Sbjct: 199 DVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELL 258
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T++ ++ +L + V + ++E M + G + TY + + + +A
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSV--Y 376
+LF M P V L++ + N L ++ + G + V Y
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K GR DEA ++ K MK G P+ I+Y+ +I G C++G+ EDA ++ +EM +
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
G + T++++I G C ++D+AL F KM
Sbjct: 884 QGVQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 914
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 8/243 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + I+Y ++ R +D + EM G + D+ T+ + K + +A
Sbjct: 669 GVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA 728
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L E M+ P+ + L++ + N + ++ K + LG Y +
Sbjct: 729 NELLEVMIQRGCIPNTVTYTTLVKGLCM--NDRISEATQLFMKMQKLGCLPDVVTYGTLM 786
Query: 381 RALTKLGRFDEAEKMMKAM------KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ L + G A ++ K M F+PD I+YS +I GLCK GR ++A + EM
Sbjct: 787 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 846
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G IP++ ++T LI G C + +++ A F +M+++ +A V+I+GF + ++
Sbjct: 847 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 906
Query: 495 NGA 497
+ A
Sbjct: 907 DKA 909
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/405 (20%), Positives = 158/405 (39%), Gaps = 67/405 (16%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + +TY+ +++ L + + + MKK G D Y + + + +
Sbjct: 263 HRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKIN 322
Query: 319 DAVKLFEFMMDGP-------YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---G 368
A+ L + M++ +P V S+L+ + G V E + G
Sbjct: 323 IALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCK-----EGKVIEANELLEVMIQRG 377
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG------ 422
L Y + + L R EA + +M+ G PD ITY ++ GLC+ G
Sbjct: 378 CILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIAL 437
Query: 423 -----------------------------------RFEDACNVLDEMEENGCIPDIKTWT 447
R ++A + +EM+ G +PD+ ++T
Sbjct: 438 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYT 497
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G C + + ++A F +M++ D VLI+ + +V A KLL +I++
Sbjct: 498 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 557
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVED 564
+ T TL++ L R+ +A L M+K P ++ + + G ++
Sbjct: 558 GCILDV-VTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKI 616
Query: 565 ASEFLKAL-------SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
A E K + + P++ +Y + + GR EA++L
Sbjct: 617 ALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 661
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/339 (23%), Positives = 148/339 (43%), Gaps = 7/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + +L + + D +V++M + GY D T+ + +A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P++ +++ + D+ L F + NK E+ + +Y +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCK--RGDIDLAFNLLNKMEAAKIEANVVIYSTVI 267
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + M+N G P+ ITYS +I LC R+ DA +L +M E
Sbjct: 268 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKIN 327
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI ++ A + +M++++ D D LINGF R++ A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
MI K P T+ TLI A+R++E + L R M ++ + I F
Sbjct: 388 FELMISK-DCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 561 TVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGR 595
D F + +S +P+ Y + + G+
Sbjct: 447 QARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 485
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 140/303 (46%), Gaps = 7/303 (2%)
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y +I R ++DA+ LF M+ PS+ + + LL +I+ + DL V + K
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDL--VISLGEK 110
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ LG S + Y+ + + + A ++ M G+EP +T S ++ G C R
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
DA ++D+M E G PD T+T LI G N+ A+ +M+++ + V
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
++NG + ++ A+ LL +M E ++ + T+I+ L R ++A+NL M+ +
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 289
Query: 544 NYPPFPEPFVQYISKFGTVE---DASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
P + IS E DAS L + K P+ + + ++F EG+ EA
Sbjct: 290 GVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEA 349
Query: 600 KDL 602
+ L
Sbjct: 350 EKL 352
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 109/462 (23%), Positives = 196/462 (42%), Gaps = 54/462 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + PS S +L + + + +M E + T+ +++ L KAS
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLG------SDWDDKIGKKLEDMKIELSDNFV 235
+ AL D MV+ N+ V VV G D + K+E KIE +
Sbjct: 208 EAVAL---VDRMVQRGCQPNLVTYGV-VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIY 263
Query: 236 LTVLKELRIYPVK--ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
TV+ L Y + AL F + E+ G + N ITY+ ++ L +E D ++ +M
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+ ++ T+ + F K + +A KL++ M+ RSI +PD
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIK--------------RSI----DPD 364
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
+F Y SL N ++D R DEA+ M + M + P+ +TY+
Sbjct: 365 ---IF----TYSSLINGFC--MHD----------RLDEAKHMFELMISKDCFPNVVTYNT 405
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I G CKA R ++ + EM + G + + T+T LI G A + D A + F +M+
Sbjct: 406 LINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDG 465
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + L++G ++ A ++ E +++ ++ P T+ +IE + A ++E+
Sbjct: 466 VHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 524
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL 572
+L + + P + IS F G E+A + +
Sbjct: 525 WDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 84/184 (45%), Gaps = 8/184 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ + + + + + EM + G + TY + F + R ++A +F
Sbjct: 399 NVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 458
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---YDGIHR 381
+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 459 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQRSKMEPTIYTYNIMIE 513
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +PD I Y+ +I G C+ G E+A + +M E+G +P
Sbjct: 514 GMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLP 573
Query: 442 DIKT 445
D T
Sbjct: 574 DSGT 577
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 48/349 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +T+TYN I+R + + V + ++ + G + DI TY + R +
Sbjct: 238 GLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEG 297
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL M+ KP+V S+L+ +
Sbjct: 298 EKLISEMISIGCKPNVVTHSILIGT----------------------------------- 322
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + G+ +EA ++++MK G +PD Y +I G C+ GR + A L+ M +GC+
Sbjct: 323 --LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCL 380
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI + ++ G C + D+AL F K+ E + + L + S A ++
Sbjct: 381 PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEM 440
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----- 555
+++++ + + P + T+ +LI L ++EA+ LL M+ Y P V Y
Sbjct: 441 ILKLLNQ-GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRP---NVVSYNIILL 496
Query: 556 -ISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ K DA E L A++ K P+ Y+ + E G EA +L
Sbjct: 497 GLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 144/336 (42%), Gaps = 48/336 (14%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+++ E M+D Y P V C+ L++ N+ ++G RV E G Y+
Sbjct: 87 ESLYFLECMVDKGYTPDVILCTKLIKGF--FNSRNIGKATRVMEILERYGKP-DVFAYNA 143
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K + + A +++ MK+ GF PD +TY+ +I C G+ + A + +E+ ++
Sbjct: 144 LISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDN 203
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+TILI+ +D A+ +M+ K + D + +I G + V+ A+
Sbjct: 204 CEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAF 263
Query: 499 -----------------------------------KLLVEMIEKVRLRPWQATFKTLIEK 523
KL+ EMI + +P T LI
Sbjct: 264 ELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI-SIGCKPNVVTHSILIGT 322
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLK-ALSVKEYPS 579
L ++EEA+NLLR MK++ P +P + + G ++ A+EFL+ +S P
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382
Query: 580 SAAYLQVFESFFNEGRHYEAKDLLYK-----CPHHI 610
Y + G+ +A ++ K CP ++
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNV 418
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 167/372 (44%), Gaps = 10/372 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + YN ++ + + + V++ MK G+ D+ TY + F ++ A++
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+FE ++ +P+V ++L+ + +I + + + ++ ++ S G Y+ I R
Sbjct: 195 IFEELLKDNCEPTVITYTILIEA--TILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ K D+A ++++++ + G +PD ITY+ ++ L G++ + ++ EM GC P+
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T +ILI C +V+ A+ M EK DA D LI GF + R++ A + L
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV 562
MI L P + T++ L + ++A+ + + + PP + S +
Sbjct: 373 YMISDGCL-PDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSS 431
Query: 563 EDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS- 617
D LK L+ P Y + +G EA +LL + + +S
Sbjct: 432 GDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSY 491
Query: 618 --LLFGSAKSNK 627
+L G K N+
Sbjct: 492 NIILLGLCKVNR 503
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 7/207 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ R + E G K + Y+ ++ R + +E M +G DI Y I
Sbjct: 331 EAVNLLRSMKEK-GLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTI 389
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYE 365
+ + A+++FE + + P+V + L ++ S + L ++ ++ N+
Sbjct: 390 MAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ-- 447
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G + Y+ + L + G DEA +++ M++ + P+ ++Y+ ++ GLCK R
Sbjct: 448 --GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRAN 505
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQG 452
DA VL M E GC P+ T+ +LI+G
Sbjct: 506 DAIEVLAAMTEKGCQPNETTYILLIEG 532
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 419 CKAGRFEDACNVLDEMEENG-------CI---------------------------PDIK 444
C+AG++ ++ L+ M + G C PD+
Sbjct: 80 CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVF 139
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI G AN+++ A +M + + D +++I F S+ +++ A ++ E+
Sbjct: 140 AYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEEL 199
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGT 561
+ K P T+ LIE + ++ AM LL M + P ++ + K
Sbjct: 200 L-KDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
V+ A E L++LS + P Y + + + G+ E + L+
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLI 301
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L+ C A + + +L M++K Y D L LI GF + + + A +++ E++E+
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVM-EILERY 133
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+P + LI + A +LE A +L MK + + P
Sbjct: 134 G-KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLP 171
>gi|224111048|ref|XP_002315730.1| predicted protein [Populus trichocarpa]
gi|222864770|gb|EEF01901.1| predicted protein [Populus trichocarpa]
Length = 760
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 172/390 (44%), Gaps = 44/390 (11%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW ++ + + E + V VL R P AL FFRWV +H+ T+ I+
Sbjct: 97 DWTTRLQNSIRALVPEFDHSLVYNVLHGAR-KPDHALQFFRWVERAGLIQHDRETHMKII 155
Query: 274 RVLARHESVRDFWNVV-EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
++L R+ + +V E+M K+G+E+D D ++ + + K +++++VK+F M +
Sbjct: 156 QILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGV 215
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
+ SV+ + L + I + + R NK G ++ Y+ + R A
Sbjct: 216 ERSVKSYNALFKVI--VRKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTA 273
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ + MK G PD +TY+ +I G + R E+A + EM+ P + ++T +I+G
Sbjct: 274 VRFYEDMKVRGISPDVVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKG 333
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+ A + R+N +LL EM + V ++P
Sbjct: 334 YFAVD-----------------------------------RINDGLRLLEEM-KSVGIKP 357
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYIS---KFGTVEDASEF 568
T+ TL+ L A ++ EA ++L+ M ++ P F++ ++ K G ++ A +
Sbjct: 358 NNVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDV 417
Query: 569 LKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
L + PS A + V F + Y+
Sbjct: 418 LDGMIKLSIPSEAGHYGVLIENFCKAEEYD 447
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 220/536 (41%), Gaps = 57/536 (10%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
DW+ L+N + L P+ H S+VY + P+ A FF WV + + ++
Sbjct: 97 DWTTRLQNSIRALVPEFDH-SLVYNVLHGARKPDHALQFFRWVERAGLIQHDRETHMKII 155
Query: 137 RNLVNKDSLKQF-WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK 195
+ L L + L M + ++E+ ++ ++ KA G+V+
Sbjct: 156 QILGRYSMLNHARCIVLEDMPKKGFELDEDMFVLLIDSYGKA--------------GIVQ 201
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD---NFVLTVLKELRIYPVKALGF 252
E K+ K++++ +E S N + V+ Y + F
Sbjct: 202 ESV-------------------KMFSKMKELGVERSVKSYNALFKVIVRKGRYMMAKRFF 242
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+ + E G +T YN ++ +R E+MK G D+ TY + +
Sbjct: 243 NKMLDEGIGPTRHT--YNVLIWGFFLSMRLRTAVRFYEDMKVRGISPDVVTYNTMINGYY 300
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
+ + ME+A KLF M P+V + +++ +++ + GL R+ + +S+G +
Sbjct: 301 RHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGL--RLLEEMKSVGIKPN 358
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP-DNITYSQVIFGLCKAGRFEDACNVL 431
Y + L G+ EA+ ++K M P DN + +++ CKAG + A +VL
Sbjct: 359 NVTYTTLLPDLCDAGKMTEAKDILKEMVRRRIAPKDNSIFLKLLNSQCKAGDLKAAVDVL 418
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN--------YDADADLLDV 483
D M + + + +LI+ C A E D+A+ K++E + + ++ +
Sbjct: 419 DGMIKLSIPSEAGHYGVLIENFCKAEEYDQAVKFVDKLIENDIILRPQSTLEMESGAYNP 478
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+I S + A L ++++K P F LI + A +L++M ++
Sbjct: 479 VIQYLCSHGQTGKAEILFRQLLKKGVEDPL--AFNNLICGHAKEGTPDSAFEILKIMGRK 536
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
P + + I + G DA L ++ + P S+ + V ES + +GR
Sbjct: 537 GIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYEDGR 592
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 96/214 (44%), Gaps = 7/214 (3%)
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ M GFE D + +I KAG +++ + +M+E G +K++ L +
Sbjct: 171 VLEDMPKKGFELDEDMFVLLIDSYGKAGIVQESVKMFSKMKELGVERSVKSYNALFKVIV 230
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR-LRPW 513
A F KM+++ +VLI GF R+ A + +M KVR + P
Sbjct: 231 RKGRYMMAKRFFNKMLDEGIGPTRHTYNVLIWGFFLSMRLRTAVRFYEDM--KVRGISPD 288
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKAL- 572
T+ T+I +R+EEA L MK ++ P + I + V+ ++ L+ L
Sbjct: 289 VVTYNTMINGYYRHKRMEEAEKLFAEMKAKDIAPTVISYTTMIKGYFAVDRINDGLRLLE 348
Query: 573 ---SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
SV P++ Y + + G+ EAKD+L
Sbjct: 349 EMKSVGIKPNNVTYTTLLPDLCDAGKMTEAKDIL 382
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 2/170 (1%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ Y+ + + L G+ +AE + + + G E D + ++ +I G K G + A +
Sbjct: 471 MESGAYNPVIQYLCSHGQTGKAEILFRQLLKKGVE-DPLAFNNLICGHAKEGTPDSAFEI 529
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L M G D + +LI+ + E A M+E + D+ + ++
Sbjct: 530 LKIMGRKGIPRDADAYRLLIESYLRKGEPADAKTALDSMIEDGHLPDSSVFRSVMESLYE 589
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RV A +++ M+EK ++ ++E LL EEA+ + L+
Sbjct: 590 DGRVQTASRVMKSMVEK-GVKENMDLVAKILEALLMRGHEEEALGRIDLL 638
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/176 (21%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ SV+ + +L + GR A ++MK+M G + + ++++ L G E+A
Sbjct: 572 GHLPDSSVFRSVMESLYEDGRVQTASRVMKSMVEKGVKENMDLVAKILEALLMRGHEEEA 631
Query: 428 CNVLDEMEENGCIPDIKTWTILI--QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+D + + C + + ++ +G A AL ++++ D D D ++
Sbjct: 632 LGRIDLLMSSQCNVNFDSLLSILSEKGKTIA-----ALKLLDFGLQRDCDIDFKSYDKVL 686
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ L+ + AY +L +++EK + W+ +++ LI+ L ++A L R++K
Sbjct: 687 DALLAAGKTLNAYSILCKIMEKGGVTSWR-SYEDLIKSLNQEGNTKQADILSRMIK 741
>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 132/285 (46%), Gaps = 5/285 (1%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL FF + E G + T N I+ R V + N++ EM+ +G ++ TY
Sbjct: 482 VNALEFFNMMLE-GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNA 540
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K R E A++LF M+ PSV S L+ + +N L+ +
Sbjct: 541 VINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYA--RMLK 598
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G + Y + L R EA + K M G PD I+Y+ VI G C+ G
Sbjct: 599 IGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRK 658
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + +EM + G +P + T+T L+ G+C N +D A + +M K D +VLI
Sbjct: 659 AWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIA 718
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ ++ A ++L EM E L P T+ ++E LL A++L+
Sbjct: 719 AHRRRGNLDKALEMLNEMKENGVL-PDHMTY-MMLEWLLKAKKLK 761
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 150/359 (41%), Gaps = 19/359 (5%)
Query: 257 GEHSGYKHNTITYNGILRVLA---RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+ +G + +T + N +L+ LA R E +R + EEMK G ++ TY + + K
Sbjct: 205 AKKTGLELSTRSCNFLLKCLAEANRREFLRSLF---EEMKSTGPPPNVFTYTIMMNFYCK 261
Query: 314 FRMME------DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
E A ++ E M P+V S + + + + L F S
Sbjct: 262 GNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDF--VRSLISA 319
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
++ Y+ I L K G DEA K+++ MK+ G PD TYS +I G CK G E
Sbjct: 320 NGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKG 379
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+++EM+ + P + +++ L G C D +L F + Y D +LI G
Sbjct: 380 LYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKG 439
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F Q ++ A+KL+ EM+ L P + F++L+ A+ +M + P
Sbjct: 440 FCMQGDLDSAHKLMEEMVRN-NLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILP 498
Query: 548 ---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + G VE+A + + + +P+ Y V E + A +L
Sbjct: 499 SIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALEL 557
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 146/364 (40%), Gaps = 7/364 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G +TY+ + L R V + V + +++ Y I K +
Sbjct: 282 ERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGEL 341
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A+K+ E M P V S+L+ + + GL KY ++ SL Y
Sbjct: 342 DEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVS--YS 399
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K D + + + + AG++ D YS +I G C G + A +++EM N
Sbjct: 400 SLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRN 459
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
PD + L+ G C AL F M+E +V+I+ + RV A
Sbjct: 460 NLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEA 519
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
L+ EM + + P T+ +I +L R+ E A+ L LM K+N P + I
Sbjct: 520 LNLMNEM-QTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLID 578
Query: 558 KFGTVEDASEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD 613
F ++ + L + L + P AY + + R EA +L K +
Sbjct: 579 GFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTP 638
Query: 614 SKIS 617
KIS
Sbjct: 639 DKIS 642
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 23/338 (6%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---HESVRDFW 286
SD+ V VL+ LR+ P +LGFF++V + ++ N +Y ++ +L+R ++ R +
Sbjct: 66 FSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL 125
Query: 287 NVVEEMKKEGYEMDI--DTYIKISRQF----QKFRMM----------EDAVKLFEFMMDG 330
N + ++ K ++ D + + R+F F M+ ++A+ +F+ M
Sbjct: 126 NQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 185
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
PS++ C+ LL ++ + N + V + +G + + A K G+ D
Sbjct: 186 GRIPSLRSCNSLLNNL--VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 243
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA +K M+N G EP+ +TY +I G G E A VL M E G ++ T+T+LI
Sbjct: 244 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 303
Query: 451 QGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+G+C ++D A M E+ D VLI+G+ +++ A +LL EM+ ++
Sbjct: 304 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG 362
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+ +LI + EA ++ M N P
Sbjct: 363 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 31/304 (10%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ L + + + +++ EM G +I TY + + K M++ A + M
Sbjct: 580 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 639
Query: 329 DGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKY---ESLG 368
+ ++ CS ++ + + PD + +Y + +
Sbjct: 640 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 699
Query: 369 NSLSKS----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+SL +S VY+ L K G+ D+A + + GF PDN TY +I G
Sbjct: 700 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 759
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
AG ++A + DEM G +P+I T+ LI G C + VDRA F K+ +K +
Sbjct: 760 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 819
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ LI+G+ ++ A+KL +MIE+ + P T+ LI L +E +M LL
Sbjct: 820 VTYNTLIDGYCKIGNMDAAFKLKDKMIEE-GISPSVVTYSALINGLCKHGDIERSMKLLN 878
Query: 539 LMKK 542
M K
Sbjct: 879 QMIK 882
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 9/361 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A GF + + E+ G + N +TY+ ++ V V++ M ++G ++ TY +
Sbjct: 244 EAAGFVKKM-ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 302
Query: 308 SRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K M++A K+ M + P + +L+ D + R+ ++
Sbjct: 303 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV--RLLDEMLR 360
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG + + + + K G EAE ++ M + +PD+ +Y+ ++ G C+ G +
Sbjct: 361 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 420
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A N+ D+M + G P + T+ L++G C D AL + MM++ D L++
Sbjct: 421 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 480
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + GA L +++ + + TF T+I L ++ EA + MK
Sbjct: 481 GLFKMENFEGASTLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 539
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNEGRHYEAKDL 602
P + I + + + K E PS Y + F R E DL
Sbjct: 540 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 599
Query: 603 L 603
L
Sbjct: 600 L 600
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 57/382 (14%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K ++ +YN +L R + +N+ ++M +EG E + TY + + + +DA++
Sbjct: 399 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 458
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKS--VYDG 378
++ MM P S LL + + N F A+ + L +KS ++
Sbjct: 459 IWHLMMKRGVAPDEVGYSTLLDGLFKMEN------FEGASTLWKDILARGFTKSRITFNT 512
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY--------------------------- 411
+ L K+G+ EAE++ MK+ G PD ITY
Sbjct: 513 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 572
Query: 412 --------SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ +I GL K+ R + ++L EM G P+I T+ LI G C +D+A
Sbjct: 573 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 632
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT---- 519
+ +M E A+ + +++G R++ A L+ +M++ + K+
Sbjct: 633 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 692
Query: 520 -LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY- 577
I+K+ A L+E+ L Y + + K G V+DA F LS+K +
Sbjct: 693 AAIQKI--ADSLDESCKTFLLPNNIVY----NIAIAGLCKTGKVDDARRFFSMLSLKGFV 746
Query: 578 PSSAAYLQVFESFFNEGRHYEA 599
P + Y + + G EA
Sbjct: 747 PDNFTYCTLIHGYSAAGNVDEA 768
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 2/184 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA + F + + P L+ S+ N D FR+ ++ G + Y
Sbjct: 730 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA--FRLRDEMLRRGLVPNIVTY 787
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K D A+++ + G P+ +TY+ +I G CK G + A + D+M E
Sbjct: 788 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 847
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P + T++ LI G C +++R++ +M++ D+ L+ G++ +
Sbjct: 848 EGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQK 907
Query: 497 AYKL 500
+KL
Sbjct: 908 IHKL 911
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 37/201 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + TY ++ + +V + + + +EM + G +I TY + K ++ A
Sbjct: 744 GFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRA 803
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF + P+V Y+ +
Sbjct: 804 QRLFHKLHQKGLFPNV-------------------------------------VTYNTLI 826
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+G D A K+ M G P +TYS +I GLCK G E + +L++M + G
Sbjct: 827 DGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVD 886
Query: 441 PDIKTWTILIQGHCAANEVDR 461
+ + L+QG+ + E+ +
Sbjct: 887 SKLIEYCTLVQGYIRSGEMQK 907
>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
Length = 797
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 116/495 (23%), Positives = 212/495 (42%), Gaps = 20/495 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFW-VTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
K +R ++ V + +L+ L + L + + ++RM E C + +Y ++L K+A
Sbjct: 122 KSGWRVNNIVINQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRA 181
Query: 181 SD-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK----LEDMKIELSDNFV 235
+ L L+ D + + V+ +V + G + ++ K LE M + N V
Sbjct: 182 EEALELLHMMADSQGRSCPPNVVSYAIV--INGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239
Query: 236 L--TVLKELRIYPV--KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
TV+ L V +A G F+ + + G K + TYN ++ ++ ++EE
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMID-KGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEE 298
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M G + D TY + +A LF+ M+ KP+V +L+ ++
Sbjct: 299 MSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYAT--K 356
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
L + + N G S +++ I A K DEA + MK G PD + Y
Sbjct: 357 GALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNY 416
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+I LCK GR +DA ++M G P+I + L+ G C ++ ++A + +M+
Sbjct: 417 GALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLN 476
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ D + ++ ++ +V A + L++++E+V RP ++ TLI R++
Sbjct: 477 QGIRPDVVFFNTILCNLCTKGQVMKAQR-LIDLMERVGTRPGVISYTTLIGGHCLVGRID 535
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVF 587
EA L +M P + + + G ++DA F + L P Y +
Sbjct: 536 EAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTIL 595
Query: 588 ESFFNEGRHYEAKDL 602
F R EAK+L
Sbjct: 596 HGLFTTRRFSEAKEL 610
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 143/357 (40%), Gaps = 53/357 (14%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N I A+ + + ++ +MK++G D+ Y + K ++DAV F MM
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMM 440
Query: 329 DGPYKPSVQDCSLLLRSISSINN-----------------PDL-------------GLVF 358
+ P++ + L+ + +++ PD+ G V
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500
Query: 359 ---RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ + E +G Y + +GR DEA K + M + G +PD TY+ ++
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G C+AGR +DA V EM NG P + T++ ++ G A + M+
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + ++++NG V+ A+KL + K + TF +I L + R E+AM+
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK-DFQLEITTFNIMIGALFKSGRNEDAMH 679
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
L IS +G V D + + E YL+ F+ F+
Sbjct: 680 LF----------------ATISSYGLVPDVFTYCL---IAENLIEEGYLEEFDDLFS 717
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 140/302 (46%), Gaps = 17/302 (5%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----PDLGLVFRVANKY---ESLG 368
++DA+KLF+ ++ SV + LL ++S ++ + LV + N+ ++
Sbjct: 30 LDDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y + ++GR + + +G+ +NI +Q++ GLC A R +A
Sbjct: 90 VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAM 149
Query: 429 NVL-DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME---KNYDADADLLDVL 484
++L M E GC PD+ ++ L++G C + AL M + ++ + ++
Sbjct: 150 DILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIV 209
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
INGF ++ +V+ AY L +EM+++ ++P T+ T+I+ L A+ ++ A + + M +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNEGRHYEAK 600
P + + I + ++ E ++ L P Y + N GR EA+
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Query: 601 DL 602
L
Sbjct: 329 FL 330
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 100/226 (44%), Gaps = 2/226 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN +L R + D + V EM + G + TY I R +A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L+ M+ + ++ +++L +S N D F++ S L + ++ +
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA--FKLFQSLCSKDFQLEITTFNIMI 665
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR ++A + + + G PD TY + L + G E+ ++ ME++G
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + L++ ++ RA K+ EKN+ +A +LI+
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLIS 771
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 164/367 (44%), Gaps = 9/367 (2%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
+++ V VLK + A FF W G++H+ +Y+ ++ +L + W+
Sbjct: 77 KITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDF 136
Query: 289 VEEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ +M++ E+ + + I R + + + DA++ F M D K V D LL +
Sbjct: 137 LSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGDVDQLLYVLC 196
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ F E + N+ + S+ + R +G EA K+ + M+ G D
Sbjct: 197 KRKHVKQAQEFFDKVNVEVMPNAKTYSI---LMRGWGDVGDSSEARKLFEEMRERGCAVD 253
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ ++ LCK G ++A + EM NG PD +++I I+ +C N++ A
Sbjct: 254 VVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLD 313
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M N + + ++ ++V+ AY+LL EMIE+ + P ++ +
Sbjct: 314 RMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIER-GVSPDLWSYNAIQAFHCDH 372
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAY 583
+ +A+ L+ M+K+N P + ++ + + G + ++ + + YP+++ Y
Sbjct: 373 CEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTY 432
Query: 584 LQVFESF 590
+ F
Sbjct: 433 AVMVHGF 439
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 117/501 (23%), Positives = 199/501 (39%), Gaps = 47/501 (9%)
Query: 34 HFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELI--LACDWSD---ELENKLEE 88
HFFH S ++ H+ F T + S S + + I + D+ D +LE L
Sbjct: 16 HFFH--SLSSPKTHHSRLFSSQTILQDPNSLSSSQYINEISRILSDFRDPHHDLERPLTA 73
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
S K+T V VL++ N A FF W F S Y +++ L +
Sbjct: 74 FSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLI 133
Query: 149 WVTLRRMKEDHCY-IEEETYLSILGVLKKAKKASD-LAALNQFHDGMVKEIAMDNVAKTL 206
W L M+E C I E + I +A D + A +Q D VK D
Sbjct: 134 WDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGDAIRAFHQMGDFGVKAGVGD------ 187
Query: 207 VDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
VD +L +VL K ++ +A FF V N
Sbjct: 188 VDQLL----------------------YVLCKRKHVK----QAQEFFDKVNVE--VMPNA 219
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
TY+ ++R + + EEM++ G +D+ Y + K +++A KLF
Sbjct: 220 KTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFRE 279
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M P S+ +R+ +N D+ F+V ++ + Y+ I + L K
Sbjct: 280 MGSNGLAPDACSYSIFIRAYCEVN--DIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKS 337
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
+ DEA +++ M G PD +Y+ + C A ++ ME+ C+PD T+
Sbjct: 338 EKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY 397
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK-RVNGAYKLLVEMI 505
++++ DR + M E+ + A V+++GF +K ++ A K MI
Sbjct: 398 NMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMI 457
Query: 506 EKVRLRPWQATFKTLIEKLLG 526
+ + P+ T + L +++G
Sbjct: 458 DD-GIPPYSCTVELLRNRVIG 477
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 13/346 (3%)
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ V + DV + + D + L + LS+ VL VL + + FF+W
Sbjct: 172 VGRVCAAIADV-MAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRRFFQWAAA 230
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
++H +TY +L +L + +V+EM K G + +D + + F ++
Sbjct: 231 SDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKAG-ALCMDAFKIAIKSFAAAGEIK 289
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--Y 376
+AV +FE M + V+ + LL +++ GL A ++ + + + + Y
Sbjct: 290 NAVGVFEMMRVHGFDDGVESFNCLLVALA-----QEGLGKEAARVFDRMRDQYTPDLRSY 344
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ A EA ++ M G +PD + ++ +I GL + R +A + + M+
Sbjct: 345 TALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKA 404
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ T+T+LI+ HC ++D A+ CF +M + L+ G+ + KR++
Sbjct: 405 KGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDR 464
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+L EM +K P T+ LI KLL R + + + +R+ KK
Sbjct: 465 VTAMLEEMAQK-GCPPDGRTYNALI-KLLTNRNMPD--DAVRIYKK 506
>gi|297842741|ref|XP_002889252.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335093|gb|EFH65511.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 780
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 4/329 (1%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I LE + LS N + +V+KE + FF W + ++ ++ +L+
Sbjct: 47 IEPALEPLVPFLSKNIITSVIKE-EVNRQLGFRFFIWASRRERLRSGE-SFGLVIDMLSE 104
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+W +EE+K G +D + + + K + E AV+ F M + +P V
Sbjct: 105 DNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEKAVESFGRMKEFDCRPDVFT 164
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+++LR I + L F V N+ S + + + L K GR +A+KM
Sbjct: 165 YNVILR-IMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P+ +TY+ +I GLC+ G EDA + EM+ +G PD L+ G C
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSPEDARKLFYEMKASGNYPDSVAHNALLDGFCKLGR 283
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ A + + LI+G +R A++L M+++ ++P +
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKR-NIKPDIILYT 342
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
LI+ L A ++E+A+ LLR M + P
Sbjct: 343 ILIQGLSKAGKIEDALKLLRSMPSKGITP 371
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 133/571 (23%), Positives = 224/571 (39%), Gaps = 59/571 (10%)
Query: 67 NSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR 126
N S E+I +E LE L P L+ + V+++ + + + FF W +++ R
Sbjct: 32 NISGEVISILAKKKPIEPALEPLVPFLSKNIITSVIKE-EVNRQLGFRFFIWASRRERLR 90
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
S + L++ L + +W TL +K ++ + ++ K A A+
Sbjct: 91 -SGESFGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGLAEK--AV 147
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL------EDMKIELSDN-FVLTVL 239
F G +KE T +V+L + + L E +K S N + +L
Sbjct: 148 ESF--GRMKEFDCRPDVFT-YNVILRIMMREDVFFMLAFAVYNEMLKCNCSPNLYTFGIL 204
Query: 240 -----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
K+ R + + F G G N +TY ++ L + S D + EMK
Sbjct: 205 MDGLYKKGRTSDAQKM-FDDMTGR--GISPNRVTYTILISGLCQRGSPEDARKLFYEMKA 261
Query: 295 EGYEMD-------IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
G D +D + K+ R + F ++ +LFE DG L LR S
Sbjct: 262 SGNYPDSVAHNALLDGFCKLGRMVEAFELL----RLFE--KDGFV--------LGLRGYS 307
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKN 401
S+ + L R +E N L +++ Y + + L+K G+ ++A K++++M +
Sbjct: 308 SLID-GLFRARRYTQAFELYANMLKRNIKPDIILYTILIQGLSKAGKIEDALKLLRSMPS 366
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G PD Y+ VI LC G E+ ++ EM E PD T TILI C V +
Sbjct: 367 KGITPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVRK 426
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR-----LRPWQAT 516
A F ++ + + LI+G + A +LL+ +E R LR +
Sbjct: 427 AEEIFLEIEKSGCSPSVATFNALIDGLCKSGELKEA-RLLLHKMEVGRPASLFLRLAHSG 485
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSV 574
++ + L+ NL N P + + G ++ A + L L +
Sbjct: 486 NRSFDTMVQSGSILKAYKNLAHFADTGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQL 545
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDLLY 604
K P S Y + GR EA L Y
Sbjct: 546 KGLSPDSVTYNTLINGLHRVGREEEAFKLFY 576
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 97/238 (40%), Gaps = 15/238 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + ++YN ++ R + ++ ++ +G D TY + + E+
Sbjct: 511 TGNSPDIVSYNVLINGFCREGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A KLF D + P+V RS+ S L + F + KY + L +
Sbjct: 571 AFKLFYAKDDFRHSPAVY------RSLMTWSCRRRKLLVAFNLWMKYLKKISCLDDETAN 624
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT---YSQVIFGLCKAGRFEDACNVLDEM 434
I + + E E+ ++ + D +T Y+ + GLC++GRF +A V +
Sbjct: 625 EIEQCFKE----GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVL 680
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
E + + LI G C ++D A+ F ++ N+ + + L++ L +
Sbjct: 681 REKKILVTPPSCVKLIHGLCKREQLDAAIDVFLYTLDNNFKLMPRVCNYLLSSLLQSR 738
>gi|357150350|ref|XP_003575429.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial-like [Brachypodium distachyon]
Length = 684
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 121/532 (22%), Positives = 211/532 (39%), Gaps = 95/532 (17%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDL 183
RPS+ VY+ ++ V ++ ++ ++M D C + TY +++ GV ++ L
Sbjct: 172 LRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEAL 231
Query: 184 AALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
+ Q ++ LVD + + ED V +KE
Sbjct: 232 RLVRQMEGAGIRPNVF--TYTMLVDGFCNAG-------RPEDAV------HVFDTMKEKG 276
Query: 244 IYPVKAL------GFFRWVGEHSGY------------KHNTITYNGILRVLARHESVRDF 285
+ P +A G FR +G H Y H++ + +L L+++E ++
Sbjct: 277 VSPNEASYRTLVHGAFRCLGRHKAYVMLTEWLGREPPPHHS-AWQCMLYCLSKNEMAKEV 335
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V ++M GY +D + + K + D L + + P ++++S
Sbjct: 336 VEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLLDDFVKKGGNPGFDVYIMVIKS 395
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT----------KLGRFDEAEKM 395
+ + AN Y L + V DG+ +T K G D+A ++
Sbjct: 396 LLGCKSSS------KANHY------LKRMVLDGLLSGVTSYNMVIDCFVKAGAVDKAAEI 443
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+K M+ G P+ +T++ +I G K G +A VL + E+G IPDI T+T LI G C
Sbjct: 444 IKEMREKGVLPNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIITFTSLINGLCH 503
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM----------- 504
+++D A CF +M E +A +VL++ S VN A LL +M
Sbjct: 504 THQLDDAFDCFNEMAEWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNKMKKDGITPDAYS 563
Query: 505 -------------IEKVR------LR----PWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++K R LR P T+ +LI+ L RR++EA +L LM+
Sbjct: 564 FNAPILSFCRMKKVDKARNIFNAMLRLGVVPDNYTYNSLIKALCDERRIDEAKEILLLME 623
Query: 542 KQNYPPFPE----PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
P V ++K G A + + + + S + ES
Sbjct: 624 SSGSSATTHHTHLPIVSALTKTGQFSKAGQLMNKYNRRNVQLSCGSNRTIES 675
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 85/179 (47%), Gaps = 1/179 (0%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S +VY+ + A + G D A + M G +PD TY+ ++ G+C+ G ++
Sbjct: 170 LGLRPSTAVYNALIVASVRAGAVDTAYLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDE 229
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +ME G P++ T+T+L+ G C A + A+ F M EK + L++
Sbjct: 230 ALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDAVHVFDTMKEKGVSPNEASYRTLVH 289
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G + AY +L E + + P + ++ ++ L +E + + + M + Y
Sbjct: 290 GAFRCLGRHKAYVMLTEWLGR-EPPPHHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGY 347
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 68/155 (43%), Gaps = 1/155 (0%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G +S+ + + + +LG A ++ M G P Y+ +I +AG + A
Sbjct: 136 GCEVSEELLRALIASWGRLGLAQYAHEVFVQMPRLGLRPSTAVYNALIVASVRAGAVDTA 195
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+M +GC PD T+ L+ G C +D AL +M + +L++G
Sbjct: 196 YLRFQQMPADGCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDG 255
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
F + R A + M EK + P +A+++TL+
Sbjct: 256 FCNAGRPEDAVHVFDTMKEK-GVSPNEASYRTLVH 289
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 144/360 (40%), Gaps = 29/360 (8%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TYN ++ + + + + +V +M+ G ++ TY + F EDA
Sbjct: 206 GCQPDCFTYNTLVHGVCQRGIIDEALRLVRQMEGAGIRPNVFTYTMLVDGFCNAGRPEDA 265
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES-------LGNSLSK 373
V +F+ M + P+ L+ FR ++++ LG
Sbjct: 266 VHVFDTMKEKGVSPNEASYRTLVHG-----------AFRCLGRHKAYVMLTEWLGREPPP 314
Query: 374 --SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S + + L+K E ++ K M + G+ DN + V+ K D C +L
Sbjct: 315 HHSAWQCMLYCLSKNEMAKEVVEVTKKMNSRGYLLDNAIFGIVVSCAVKCLELSDLCGLL 374
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
D+ + G P + ++I+ +A +M+ + +++I+ F+
Sbjct: 375 DDFVKKGGNPGFDVYIMVIKSLLGCKSSSKANHYLKRMVLDGLLSGVTSYNMVIDCFVKA 434
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
V+ A +++ EM EK L P TF TLI + A +L+++ + P
Sbjct: 435 GAVDKAAEIIKEMREKGVL-PNLVTFNTLISGYSKLGNVHNAKAVLKMLMEHGLIPDIIT 493
Query: 552 FVQYISKFG---TVEDASEFLKALSVKEY---PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F I+ ++DA + ++ E+ P++ Y + + + G +A DLL K
Sbjct: 494 FTSLINGLCHTHQLDDAFDCFNEMA--EWGVRPNAHTYNVLMHALCSAGHVNKAIDLLNK 551
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 140/315 (44%), Gaps = 6/315 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +T+N +L+ L +H V M + D+ ++ + F + +E+A
Sbjct: 222 GLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEA 281
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K ++ M P V S L+ S+ D + + + LG +Y +
Sbjct: 282 MKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAY--LREMKGLGLVPDGVIYTMVI 339
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G EA ++ M G PD +TY+ ++ GLCK R DA +L+EM+E G
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI G+C ++AL F ++ + D + LI+G + + A +L
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYPPFP--EPFVQYIS 557
+M + + P T+ LI+ ++EEA L ++ K N P ++
Sbjct: 460 WDDMHAR-EIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYC 518
Query: 558 KFGTVEDASEFLKAL 572
+ G V+ +FL+ +
Sbjct: 519 RSGNVKKGQQFLQKM 533
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 145/345 (42%), Gaps = 7/345 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+N ++ R V +V+ M +G + I T+ + + K R + A ++F
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M P V+ ++L+ + + + F + + G + + + +
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKF--YKEMQQRGVTPDVVSFSCLIGLFS 308
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G+ D A ++ MK G PD + Y+ VI G C+AG +A V DEM GC+PD+
Sbjct: 309 TRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVV 368
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ L+ G C + + A +M E+ D LI+G+ A +L +
Sbjct: 369 TYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
+ + RLRP + +LI+ + L +A L M + P + I G
Sbjct: 429 LHQ-RLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487
Query: 562 VEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
VE+A FL + +S P+ Y + + + G + + L K
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK 532
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 137/307 (44%), Gaps = 38/307 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN +L L + + D ++ EMK+ G D+ T+ + + + E A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKA 421
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++LF+ ++ +P V VA Y SL DG+
Sbjct: 422 LQLFDTLLHQRLRPDV-----------------------VA--YNSL--------IDGMC 448
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R G +A ++ M P+++TYS +I C+ G+ E+A LDEM G +
Sbjct: 449 RK----GDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNL 504
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ +I+G+C + V + KMM+ N D + LI+G++ ++ ++GA+ +
Sbjct: 505 PNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNV 564
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
++EK ++P T+ +I +EEA + + M P ++ I+
Sbjct: 565 F-NIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHV 623
Query: 561 TVEDASE 567
T ++ E
Sbjct: 624 TAGNSKE 630
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 5/219 (2%)
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
FD+A+ ++ M+ PD +T++ +I +AG + A ++D M G P I T+
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+++G C D+A F M + + D ++LI GF V A K EM ++
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQR- 291
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEF 568
+ P +F LI +++ A LR MK P + I F SE
Sbjct: 292 GVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 569 LKA----LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
L+ + + P Y + + R +A++LL
Sbjct: 352 LRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELL 390
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ ++ V + + ++EM +G +I TY I + + + ++ +
Sbjct: 471 NHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFL 530
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ MM P + + L+ I ++ F V N E Y+ I +
Sbjct: 531 QKMMQDNILPDLITFNTLIHGY--IKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G +EA ++ K M +G EPD TY +I G AG ++A + DEM G PD K
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M+ +PD +TY+ +I G + G E+A V +M +G PD T+ LI GH A
Sbjct: 568 MEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGN 627
Query: 459 VDRALLCFAKMMEKNYDAD 477
A +MM + + D
Sbjct: 628 SKEAFQLHDEMMHRGFAPD 646
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 154/360 (42%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F V E G + + I ++G++ +RD + + DT K+
Sbjct: 50 ASAVFAAVLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKV 109
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 110 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 167
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G PD TYS +I GLCK + + A
Sbjct: 168 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGA 227
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 228 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 287
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 288 LCKKGDLKQAHDLIDEMSXK-GLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRL 346
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 347 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKLL 406
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 96/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G D+ TY + K M+ A
Sbjct: 168 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGA 227
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 228 NELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 285
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY+ +I G CK G + A M +
Sbjct: 286 YGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIR 345
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ DA ++IN F + V KL
Sbjct: 346 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVWKGSKL 405
Query: 501 LVEM 504
L EM
Sbjct: 406 LKEM 409
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 124/254 (48%), Gaps = 3/254 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +TYN ++ + V ++ M + G DI +Y + F K + ++A
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M P V S L+ +S + + ++ ++ G + Y+ I
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSK--SGRISYALQLVDQMHDRGVPPTIRTYNSIL 442
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K+ + D+A ++ +K+ G +P+ TYS +I GLC++G+ EDA V + + G
Sbjct: 443 DALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHN 502
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ T+TI+IQG C + AL +KM + DA +++I + + A KL
Sbjct: 503 LNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 562
Query: 501 LVEMIEKVRLRPWQ 514
L EMI + +RP Q
Sbjct: 563 LREMIAR-GVRPRQ 575
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 129/287 (44%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY +TIT+ +++ L ++ + +++ G+ D +Y + K A
Sbjct: 150 GYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + + +P+V + ++ S+ + + F + ++ S G S Y +
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVK--LVNEAFDLFSEMISKGISPDVVTYSALI 267
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
LG+ ++A + M +PD T++ ++ CK G+ ++ V D M + G
Sbjct: 268 SGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+ L+ G+C EV++A F M + + D ++INGF K+ + A L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM K + P T+ +LI+ L + R+ A+ L+ M + PP
Sbjct: 388 FKEMHRK-NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 12/228 (5%)
Query: 333 KPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
KP++ +C++L+ LGL+ F V K +G + + + L G+
Sbjct: 117 KPNLVNCNILINCFCQ-----LGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQI 171
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+A + GF D I+Y +I GLCK G A ++L ++ N P++ + +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C V+ A F++M+ K D LI+GF ++N A L +MI +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE-N 290
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++P TF L+ +++E + +M KQ P FV Y S
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP---NFVTYNS 335
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 165/364 (45%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
P +AL R + + N +TYN ++ V+ +++ EM+ + G + TY
Sbjct: 130 PARALELLRQMP-----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 184
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +++AVK+F E + G KP + L+ D L++R ++
Sbjct: 185 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR--DR 242
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR EA ++++ M G PD TY+ +I G CK G
Sbjct: 243 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGN 302
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI +V F + + + D L +
Sbjct: 303 VKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 362
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L R++EA L+ M ++
Sbjct: 363 LINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTER 421
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G V+DA + K + P+ Y + + G+ +A
Sbjct: 422 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 481
Query: 600 KDLL 603
++++
Sbjct: 482 ENMV 485
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 37/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G TYN ++ L + + +VEEM +G D+ TY + K ++ A
Sbjct: 247 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKA 306
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANK 363
+++FE M + +V + L+ ++S PDL L
Sbjct: 307 LEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL------- 359
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y +L NS S S G D A ++M M+ PD++TY+ ++ GLC GR
Sbjct: 360 YNALINSHSTS------------GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 407
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++DEM E G PD+ T+ LI G+ +V AL +MM K ++ +
Sbjct: 408 VDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
LI G + + A ++ EM+E + P +T+ +LIE L
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLIEGL 507
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ + +V+ + E M + G + TY + K +++
Sbjct: 282 GLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQET 341
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ + +P + + L+ S S+ N D F + + E + Y+ +
Sbjct: 342 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDR--AFEIMGEMEKKRIAPDDVTYNTLM 399
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L LGR DEA K++ M G +PD +TY+ +I G G +DA + +EM G
Sbjct: 400 RGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 459
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
P + T+ LIQG C + D A +M+E D LI G ++
Sbjct: 460 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 510
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 86/179 (48%), Gaps = 7/179 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A ++
Sbjct: 112 LCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDI 167
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGF 488
+ EM E G I P+ T+ +I G C VD A+ F +M+ K +A + + LI G+
Sbjct: 168 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 227
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
Q +++ A M+E+ + AT+ L+ L R EA L+ M + P
Sbjct: 228 CDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAP 285
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 170/384 (44%), Gaps = 17/384 (4%)
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
N G KE+ +D+V K L G D ++ + +E K +L V+ VL+ +
Sbjct: 55 NWTKSGTAKEV-VDDVCKILESGNWGPDVENALSLFVESPKTDL----VIGVLRRAKDVN 109
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+A+ +FRW + Y+ +L V+A++ F ++ EM G+ T I+
Sbjct: 110 -QAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTCIE 168
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K + + L + M ++P+ + L+ ++SS+ D+ L + ++ +
Sbjct: 169 LILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLT--LFHQMQE 226
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG +S ++ + R + GR D A ++ MK+ D + Y+ I KAG+ +
Sbjct: 227 LGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDM 286
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A E++ +G +PD T+T +I C N +D A+ F +M + A + +I
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIM 346
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLR---PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
G+ S + + AY LL E+ + R P + ++ L RL EA+ MKK
Sbjct: 347 GYGSAGKFDEAYSLL----ERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKD 402
Query: 544 NYPPFP--EPFVQYISKFGTVEDA 565
P + + K G VE A
Sbjct: 403 AAPNLSTYNVLIDMLCKAGEVEAA 426
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 119/287 (41%), Gaps = 38/287 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + ++Y+ ++ L + R+ + + MK++G +D Y F K + A
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L E M +P+V Y +
Sbjct: 637 YQLLEEMKTKGRQPTV-------------------------------------VTYGSVI 659
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K+ R DEA + + K+ G E + + YS +I G K GR ++A +++E+ + G
Sbjct: 660 DGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 719
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ TW L+ A E++ AL+CF M + +LING ++ N A+
Sbjct: 720 PNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVF 779
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM +K L+P T+ T+I L A + EA +L K P
Sbjct: 780 WQEM-QKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVP 825
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 130/305 (42%), Gaps = 17/305 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TYN ++ +L + V + V + MK+ G ++ T + + K + +++A +F
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIF 465
Query: 325 EFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------VYD 377
E M P V CSL+ LG RV + Y L VY
Sbjct: 466 EGMNHKICSPDEVTFCSLI---------DGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ ++ K GR ++ K+ K M + G PD + + + KAG + +E++
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G IPD+ +++ILI G A F M E+ D + I+GF +VN A
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
Y+LL EM K R +P T+ ++I+ L RL+EA L K + I
Sbjct: 637 YQLLEEMKTKGR-QPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLID 695
Query: 558 KFGTV 562
FG V
Sbjct: 696 GFGKV 700
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 107/496 (21%), Positives = 199/496 (40%), Gaps = 77/496 (15%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
L +T+ S++ VL K N ++A F + ++ + P + Y+ M+ + +
Sbjct: 300 LPDDVTYTSMIGVLCK-GNRLDEAVEIFEQM-EQNRNVPCAYAYNTMIMGYGSAGKFDEA 357
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA--KTL 206
+ L R K C Y IL L K + + AL F + +K+ A N++ L
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGE--ALRTFEE--MKKDAAPNLSTYNVL 413
Query: 207 VDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNT 266
+D++ K G+ K+ +KE ++P N
Sbjct: 414 IDMLC------KAGEVEAAFKVR-------DAMKEAGLFP------------------NV 442
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+T N ++ L + + + + ++ E M + D T+ + K ++DA +L+E
Sbjct: 443 MTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQ 502
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
M+D P+ + L++S + G ++ + G S + + + K
Sbjct: 503 MLDSDKIPNAVVYTSLIKSFFKCGRKEDG--HKIFKEMIHRGCSPDLRLLNAYMDCVFKA 560
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G + + + +K+ GF PD ++YS +I GL KAG + + M+E GC+ D +
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYD-------------ADADLLD----------- 482
I G C + +V++A +M K A D LD
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 680
Query: 483 -----------VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
LI+GF R++ AY ++ E+++K L P T+ L++ L+ A +
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQK-GLTPNVYTWNCLLDALVKAEEIN 739
Query: 532 EAMNLLRLMKKQNYPP 547
EA+ + MK P
Sbjct: 740 EALVCFQNMKNLKGTP 755
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 135/317 (42%), Gaps = 26/317 (8%)
Query: 231 SDNFVLTVLK-ELRIYPVKALGFFR------WVGEHSGYKHNTITYNGILRVLARHESVR 283
S F+ V+ + I+ + GF R + + G +T YN + + V
Sbjct: 575 SRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVN 634
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ ++EEMK +G + + TY + K +++A LFE + +V S L+
Sbjct: 635 KAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLI 694
Query: 344 RSISSINNPDLGLVFRVANKY----ESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMK 397
G V R+ Y E + L+ +VY + + AL K +EA +
Sbjct: 695 DG--------FGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQ 746
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
MKN P++ITYS +I GLC+ +F A EM++ G P+ T+T +I G A
Sbjct: 747 NMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAG 806
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
+ A F + D+ + +I G +R AYK+ E+ R++
Sbjct: 807 NIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIF----EETRMKGCNIHT 862
Query: 518 KTLIEKLLGARRLEEAM 534
KT I LL A + +E +
Sbjct: 863 KTCI-ALLDALQKDECL 878
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 144/405 (35%), Gaps = 70/405 (17%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ + YN + + V W E+K G D TY + K +++AV++F
Sbjct: 267 DIVLYNVCIDCFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIF 326
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPD--------------------LGLVFRVANKY 364
E M P + ++ S D + K
Sbjct: 327 EQMEQNRNVPCAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKK 386
Query: 365 ESLGNSLSK------------SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
LG +L S Y+ + L K G + A K+ AMK AG P+ +T +
Sbjct: 387 GRLGEALRTFEEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVN 446
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I LCKA + ++AC++ + M C PD T+ LI G VD A + +M++
Sbjct: 447 IMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDS 506
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMI--------------------------- 505
+ +A + LI F R +K+ EMI
Sbjct: 507 DKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKG 566
Query: 506 ----EKVRLR---PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
E+++ R P ++ LI L+ A E L MK+Q + +I
Sbjct: 567 RALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDG 626
Query: 559 F---GTVEDASEFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEA 599
F G V A + L+ + K P+ Y V + R EA
Sbjct: 627 FCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEA 671
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD +K + DT K+
Sbjct: 29 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYXLTRKHKLWVPFDTCRKV 88
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 89 LEYLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 146
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 147 GLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 206
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 207 DELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 266
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ +M K L+P + T+ TLI+ L A + + ++N
Sbjct: 267 LCKKGDLKQAHDLIDDMSRK-GLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRL 325
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 326 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLL 385
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 98/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 147 GLRPSAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 206
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 207 DELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 264
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G A + +
Sbjct: 265 YGLCKKGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIR 324
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ + D ++IN F + V KL
Sbjct: 325 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 384
Query: 501 LVEM 504
L EM
Sbjct: 385 LKEM 388
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L VY + L + GR +AEKM++ M + G PD TY+ +I CK G +
Sbjct: 325 LDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKL 384
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ +G +P + T+ +L+ G
Sbjct: 385 LKEMQRDGHVPSVVTYNVLMNG 406
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 143/296 (48%), Gaps = 23/296 (7%)
Query: 317 MEDAVKLFEFM--MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
++DA++L + + ++ P +V C+ L++ + + R A+ L S
Sbjct: 83 LDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASG--------RTADARRVLAASGPDV 134
Query: 375 -VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
VY+ + G+ D A +++ M EPD TY+ +I GLC GR +A VL++
Sbjct: 135 MVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLED 191
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M GC+PD+ T+TIL++ C + +A+ +M +K D +V++NG + R
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGR 251
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
V A + L + + P ++ +++ L A R E+A L+ M + PP F
Sbjct: 252 VEDAMEFL-KNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 553 --VQYISKFGTVEDASEFLKALSVKEY---PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++ + G VE A E L+ + +Y P+S +Y + +F + + ++A + +
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQM--PQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFV 364
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 173/412 (41%), Gaps = 39/412 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P + Y+ ++R L + L M C + TY +L K++ +
Sbjct: 164 PDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKL 223
Query: 186 LNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L++ HD G +I NV V+ G + ++ +E LK L
Sbjct: 224 LDEMHDKGCAPDIVTYNV------VLNGICQEGRVEDAME-------------FLKNLPS 264
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
Y G + NT++YN +L+ L E D ++EEM +G ++ T+
Sbjct: 265 Y---------------GCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTF 309
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + ++E A+++ E M P+ + LL + + F
Sbjct: 310 NMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEF--VELM 367
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
S G Y+ + AL + G D A +++ +K+ G P I+Y+ VI GL KAG+
Sbjct: 368 VSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKT 427
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A +LDEM G PDI T++ + G C + ++ A+ F K+ + A L + +
Sbjct: 428 KEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAI 487
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ G ++ + A L MI + P ++T+ L+E L ++EA L
Sbjct: 488 LLGLCKRRETHNAIDLFAYMISSGCM-PNESTYTILVEGLAYEGLVKEAREL 538
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 105/234 (44%), Gaps = 5/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + R L GR A +++ M G PD +TY+ ++ CK ++ A +LDEM
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ GC PDI T+ +++ G C V+ A+ + + + ++++ G + +R
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPF 552
A KL+ EM K P TF LI L +E AM +L M + P P
Sbjct: 289 DAEKLMEEMAHK-GCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 553 VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K + A EF++ + S YP +Y + + G A +LL++
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQ 401
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/370 (22%), Positives = 162/370 (43%), Gaps = 13/370 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L+ I +S V VL+ + A FF W + Y H+ Y+ ++ LA+
Sbjct: 13 LDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQY 72
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ W+++ MK++ ++++T+ I R++ + + +E+AV F M P++ + L
Sbjct: 73 QIMWDLINAMKRKRM-LNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFNGL 131
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSL--SKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
++ N V + ++S + Y + K +A ++ + M
Sbjct: 132 FSALCKSKN-----VRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMV 186
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G PD +TY ++ LCKAGR ++A +++ EM+ C P +++LI + N ++
Sbjct: 187 DVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIE 246
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M + AD + LI F + Y++L EM K ++P T +
Sbjct: 247 DAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYK-GMQPNSRTLNII 305
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSS 580
+ L+ +EA + R M K P + + I F + +E AL V +Y
Sbjct: 306 LNNLIARGETDEAFRVFRRMIKVCEPD-ADTYTMMIKMFC---ERNELEMALKVWKYMKK 361
Query: 581 AAYLQVFESF 590
++ +F
Sbjct: 362 KHFVPSMHTF 371
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 187/479 (39%), Gaps = 78/479 (16%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
L L++ +++ E V VLR+ +N A FF W + + S Y M+ +L
Sbjct: 9 LHTALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAK 68
Query: 142 KDSLKQFWVTLRRMK-------EDHCYI----------EEETYLSILGVLKKAKKASDLA 184
+ W + MK E C I EE Y V++K +LA
Sbjct: 69 IRQYQIMWDLINAMKRKRMLNVETFCIIMRKYARAQKLEEAVY--TFNVMEKYDVPPNLA 126
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
A N + K NV K +D + + D K + +L +
Sbjct: 127 AFNGLFSALCKS---KNVRKA------QEIFDSSKDRFVPDSK---TYTILLEGWGKTPN 174
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
P KA FR + + G + +TY ++ +L + V + ++V+EM + Y
Sbjct: 175 LP-KAREIFREMVD-VGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIY 232
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + +EDAV F LG+
Sbjct: 233 SVLIHTYGIENRIEDAVDTF-----------------------------LGM-------- 255
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E G + Y+ + A K+ +F +++ M G +P++ T + ++ L G
Sbjct: 256 EKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNLIARGET 315
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A V M + C PD T+T++I+ C NE++ AL + M +K++ VL
Sbjct: 316 DEAFRVFRRMIK-VCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSMHTFSVL 374
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
ING + V+ A +L +MIEK +RP TF L L+ R L++ +N+L
Sbjct: 375 INGLCEEGDVSHACVMLEDMIEK-GIRPSGVTFGRLRHLLIKEGREDVLEFLQQKINVL 432
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 148/338 (43%), Gaps = 37/338 (10%)
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE-----------------S 281
L L + P AL F W+ +KHN +Y ++ +L E S
Sbjct: 33 LFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKSCNS 92
Query: 282 VRDFWNVVE---EMKKEG-----YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
VRD VV+ M+K Y++ Y + +F ++E+ +L+ M++
Sbjct: 93 VRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVS 152
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYES----LGNSLSKSVYDGIHRALTKLGRF 389
P + + L+ LG V A +Y + G Y +
Sbjct: 153 PDIYTFNTLVNGYCK-----LGYVVE-AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV 206
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D A K+ K M G + ++Y+Q+I+GL +A + ++A ++L +M+++ C P+++T+T+L
Sbjct: 207 DAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVL 266
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C + + A+ F +M E D + VLI F S ++ A LL M+E
Sbjct: 267 IDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLEN-G 325
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L P T+ LI K + + +AM LL M +QN P
Sbjct: 326 LMPNVITYNALI-KGFCKKNVHKAMGLLSKMLEQNLVP 362
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 98/216 (45%), Gaps = 10/216 (4%)
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
Y V+A + W+ + +G + TY + R + V + V +EM + G + +Y
Sbjct: 170 YVVEAKQYVTWLIQ-AGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
++ + + +++A+ L M D P+V+ ++L+ ++ G N +
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS-----GQKSEAMNLF 283
Query: 365 ESLGNSLSK---SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ + S K +Y + ++ DEA +++ M G P+ ITY+ +I G CK
Sbjct: 284 KQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK 343
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A +L +M E +PD+ T+ LI G C++
Sbjct: 344 N-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSG 378
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 134/275 (48%), Gaps = 7/275 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+T+ ++ VL + V + V E M ++G E +I TY + + M DA K+F
Sbjct: 190 NTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVF 249
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHRA 382
E M+ PSV S+L+ D L+ +++ K E + N+++ Y+ + +
Sbjct: 250 EIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEK-ELIPNTVT---YNTLMQG 305
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L EA+++ K M ++G P+ TYS ++ GLCK G E+A +L M+E PD
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
I + ILIQG A +++ A F+K+ +++I G L + + AYKL
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFR 425
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+M E P ++ +I+ L + A+ L+
Sbjct: 426 KM-EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLI 459
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 140/328 (42%), Gaps = 42/328 (12%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ F M+ +PS + L SI+ V + N+ + G + +
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAK--KKQYSTVVSLCNQMDLFGVAHNDYTL 124
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + +L +L A ++ M G +PD++T++ +I GLC GR ++A + +EM
Sbjct: 125 NILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAG 184
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-------YDA------------D 477
+P+ T+TIL+ C V A F M EK Y+A D
Sbjct: 185 RDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMND 244
Query: 478 ADLL----------------DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
A + +LING+ +R++ A LL +M EK L P T+ TL+
Sbjct: 245 ASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEK-ELIPNTVTYNTLM 303
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY- 577
+ L A L EA L + M P + + + K G +E+A + L ++ ++
Sbjct: 304 QGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLE 363
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
P Y + + F G+ AK+L K
Sbjct: 364 PDIVLYNILIQGMFIAGKLEVAKELFSK 391
>gi|357512639|ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240852|gb|ABD32710.1| Tetratricopeptide-like helical [Medicago truncatula]
gi|355501623|gb|AES82826.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 451
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 133/282 (47%), Gaps = 9/282 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHES-VRDFWNVVEEMKKEGYEMDIDTY 304
P KAL F ++ K T N IL +L H + +R +++ ++ K G D +Y
Sbjct: 127 PDKALNTF-YIMLQFNIKPLTKHLNRILDILVSHRNYLRPAFDLFKDAHKHGVFPDTKSY 185
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVAN 362
+ R F + A LF M P +Q +L++++ S N + L + N
Sbjct: 186 NILMRAFCLNGDISIAYTLFNKMFKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLN 245
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
K G Y + +L + + EA K++ MK G PD + Y+ VI G C+ G
Sbjct: 246 K----GFVPDSFTYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIVHYNTVILGFCREG 301
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R DAC V+D+M+ NGC+P++ ++ L+ G C +D A +M+ K + ++
Sbjct: 302 RAHDACKVIDDMQANGCLPNLVSYRTLVNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIH 361
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
L+ GF + R+ A +L + +E R P + T+ ++ ++
Sbjct: 362 ALVKGFCNVGRIEEACGVLTKSLEH-REAPHKDTWMIIVPQI 402
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 103/259 (39%), Gaps = 34/259 (13%)
Query: 233 NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
N +L +L R Y A F+ +H G +T +YN ++R + + + + +M
Sbjct: 150 NRILDILVSHRNYLRPAFDLFKDAHKH-GVFPDTKSYNILMRAFCLNGDISIAYTLFNKM 208
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-- 350
K DI +Y + + + + AV LFE M++ + P + LL S+
Sbjct: 209 FKRDVVPDIQSYRILMQALCRKSQVNGAVDLFEDMLNKGFVPDSFTYTTLLNSLCRKKKL 268
Query: 351 ---------------NPD--------LGL--------VFRVANKYESLGNSLSKSVYDGI 379
NPD LG +V + ++ G + Y +
Sbjct: 269 REAYKLLCRMKVKGCNPDIVHYNTVILGFCREGRAHDACKVIDDMQANGCLPNLVSYRTL 328
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L LG DEA K ++ M + GF P ++ G C GR E+AC VL + E+
Sbjct: 329 VNGLCHLGMLDEATKYVEEMLSKGFSPHFAVIHALVKGFCNVGRIEEACGVLTKSLEHRE 388
Query: 440 IPDIKTWTILIQGHCAANE 458
P TW I++ C ++
Sbjct: 389 APHKDTWMIIVPQICEVDD 407
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 147/335 (43%), Gaps = 23/335 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + +TY ++ + V ++ M + G ++ +Y + F K + +++A
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M P V + L+ + + + ++ ++ G K Y+ I
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSLIDGLCK--SGKISYALKLVDEMHDRGVPHDKITYNSIL 413
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K + D+A ++ MK+ G +PD TY+ +I GLCK GR +DA N+ +++ G
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYN 473
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+T++IQG C + D+AL +KM + +A +++I + + A KL
Sbjct: 474 ITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L EMI + L W+ + L R + NL YPP G
Sbjct: 534 LREMIARGLLFGWKKAY------CLFTRFFQRRSNL--------YPPLEVRSGHGSIDLG 579
Query: 561 TVEDA----SEFLKALSVKEYPSSAAYLQVFESFF 591
VE SE LK LS Y + +L + +
Sbjct: 580 KVEHGPESKSELLKGLS---YSADTHFLNMVPGLY 611
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 3/286 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ N IT +++ L + + +++ G+ ++ Y + K A
Sbjct: 121 GYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAA 180
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L + +P+V + ++ S+ + + F + ++ S G S Y +
Sbjct: 181 LQLLRRVDGKLVQPNVVMYNTIIDSMCKVK--LVNEAFDLYSEMVSKGISPDVVTYSALI 238
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
LG+ ++A + M + PD T+S ++ G CK GR ++A NVL M + G
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ L+ G+C +V++A F M + A+ +++INGF K+V+ A L
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
EM K + P T+ +LI+ L + ++ A+ L+ M + P
Sbjct: 359 FKEMHCK-NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVP 403
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L G+ +A + GF + + Y +I GLCK G+ A +L ++
Sbjct: 134 KGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQ 193
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ + +I C V+ A +++M+ K D LI+GF ++N A L
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGL 253
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+MI + + P TF L++ R++EA N+L +M KQ P
Sbjct: 254 FNKMISE-EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKP 299
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 5/229 (2%)
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I +L K+ + A + + M+ G D +T++ +I + G + +V + + G
Sbjct: 62 ILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKG 121
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+ T T LI+G C ++ +AL K++ + + LING + + A
Sbjct: 122 YEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAAL 181
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+LL + K+ ++P + T+I+ + + + EA +L M + P + IS
Sbjct: 182 QLLRRVDGKL-VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISG 240
Query: 559 F---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F G + DA F K +S + P + + + F EGR EAK++L
Sbjct: 241 FCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 164/347 (47%), Gaps = 11/347 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TY ++ R+ ++ + V + M KEG + + TY + +++A+ +
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
E M++ +P+V +L + ++ +I + + LV R+ + G + Y +
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKR----GCRPNVQTYTALISG 347
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L++LG+ + A + M G P+ +TY+ +I LC GRF A + ME +G + +
Sbjct: 348 LSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLAN 407
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+T+ +I+G C ++++A++ F KM++ + LING+L++ VN A +LL
Sbjct: 408 TQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL- 466
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKF 559
+++++ P + T+ L+ +LE A + M + P P + I SK
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526
Query: 560 GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G V+ A LK + + P+ +Y V E R EA+ + K
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDK 573
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 108/496 (21%), Positives = 200/496 (40%), Gaps = 81/496 (16%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P+ Y+L + L + ++ + RMK+ C +TY +++ L + K
Sbjct: 296 EKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLE 355
Query: 182 DLAALNQFHDGMVKEIAMDNVA--KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
A+ +H M+KE + N L++ + +G +
Sbjct: 356 --VAIGLYHK-MLKEGLVPNTVTYNALINELC-------VGGRFS--------------- 390
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA---------------------- 277
AL F W+ H G NT TYN I++ L
Sbjct: 391 --------TALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP 441
Query: 278 -------------RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+V + +++ MK+ G E D TY ++ F K+ +E A F
Sbjct: 442 TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYF 501
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M++ P+ + L+ S D+ L + + E +G + + Y+ + L+
Sbjct: 502 QEMVECGLNPNPVSYTALIDGHSKDGKVDIAL--SLLKRMEEMGCNPNVESYNAVINGLS 559
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K RF EAEK+ M G P+ ITY+ +I GLC+ GR + A + +ME+ C+P++
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T++ LI G C + D A +M E + D L++G + R A +L+ +M
Sbjct: 620 TYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGT 561
E+ P + + +L+ ++ A+ + ++ + + + + K G
Sbjct: 676 KER-GFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 734
Query: 562 VEDASEFLKALSVKEY 577
VE+A + KE+
Sbjct: 735 VEEAQALFDNMLEKEW 750
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 157/379 (41%), Gaps = 33/379 (8%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLAR--------------------HESVRDFWNVVEE 291
FF W+ + YKHN + +L L R E +R + + E
Sbjct: 94 FFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNE 153
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+ G+ + + + Q KF M+E A L++ M++ +PS+ + L+ +S
Sbjct: 154 ISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGK 213
Query: 352 P-DLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+ L+ +Y+ LS V Y + + D A + M G +P++
Sbjct: 214 VREAELILSQIFQYD-----LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNS 268
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TYS +I GLC GR ++A ++L+EM E G P + T+T+ I CA + A+ A+
Sbjct: 269 VTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVAR 328
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M ++ + LI+G ++ A L +M+ K L P T+ LI +L
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML-KEGLVPNTVTYNALINELCVGG 387
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYL 584
R A+ + M+ + + + I G +E A F K L + P+ Y
Sbjct: 388 RFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYN 447
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ + +G A LL
Sbjct: 448 TLINGYLTKGNVNNAARLL 466
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/420 (22%), Positives = 170/420 (40%), Gaps = 40/420 (9%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
L D EKA F + P+ Y+ ++ + K ++ L MKE+ C +E
Sbjct: 420 LGGDIEKAMVLFEKMLKMGPL-PTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDE 478
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE 224
TY ++ K K L + + + MV E ++ + ++ G D K+
Sbjct: 479 WTYNELVSGFSKWGK---LESASFYFQEMV-ECGLNPNPVSYTALIDGHSKDGKV----- 529
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ L++LK + E G N +YN ++ L++ +
Sbjct: 530 --------DIALSLLKRM---------------EEMGCNPNVESYNAVINGLSKENRFSE 566
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ ++M ++G ++ TY + + + A K+F M P++ S L+
Sbjct: 567 AEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIY 626
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ D A + +G + Y + L + GRF EAE+++K MK GF
Sbjct: 627 GLCQEGKAD------EAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGF 680
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD Y ++ CK + A + +E G + + LI C A +V+ A
Sbjct: 681 CPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQA 740
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F M+EK ++AD + VL++G L + ++ KLL ++E P T+ L +L
Sbjct: 741 LFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLL-HIMESKNFTPNIQTYVILGREL 799
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 118/253 (46%), Gaps = 8/253 (3%)
Query: 359 RVA---NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
RVA N+ +G S + + L K + A + K M N+G +P +T++ +I
Sbjct: 146 RVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
L K G+ +A +L ++ + PD+ T+T LI GHC +D A F +M+++ D
Sbjct: 206 NILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCD 265
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
++ LING ++ RV+ A +L EMIEK + P T+ I L EEA+
Sbjct: 266 PNSVTYSTLINGLCNEGRVDEALDMLEEMIEK-GIEPTVYTYTLPITALCAIEHEEEAIE 324
Query: 536 LLRLMKKQNYPPFPEPFVQYI---SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFF 591
L+ MKK+ P + + I S+ G +E A + K L P++ Y +
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 592 NEGRHYEAKDLLY 604
GR A + +
Sbjct: 385 VGGRFSTALKIFH 397
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 132/290 (45%), Gaps = 7/290 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGP-YKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
K+ K + V L+ + P KPS+ S+L+ + + + +G F +
Sbjct: 74 KLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLG--QMGFAFSLLGNI 131
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+G + + + + L GR EA ++ + GF D + Y +I GLCK G+
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
DA + +M++ P++ + +I G C VD A +M+E + D + +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+GF S R A KLL EM+ + ++ P TF LI+ L R+ EA N++ +M K+
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 545 YPPFPEPFVQYISKF---GTVEDASE-FLKALSVKEYPSSAAYLQVFESF 590
+ P + ++ + G+V +A + F K + P+ +Y + +
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGY 361
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 164/392 (41%), Gaps = 73/392 (18%)
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+K++R+YP N I YN ++ L + V + + EM + G E
Sbjct: 201 MKKIRVYP------------------NLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIE 242
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
+D+ +Y + F + AVKL E ++ G P V ++L+
Sbjct: 243 LDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILI-------------- 288
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
DG L KLGR EA ++ M G++PD ++Y+ ++ G
Sbjct: 289 -------------------DG----LCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNG 325
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
C +G +A V D+M E +P++ ++ LI G+C VD A++ +M KN D
Sbjct: 326 YCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPD 385
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA---TFKTLIEKLLGARRLEEAM 534
+ L++G R Y+ +++E +R A T+ L++ + ++A+
Sbjct: 386 TVTYNCLLDGLSKSGR--SLYEW--DLVEAMRASGQPADLITYNVLLDDYFKHEKFDKAL 441
Query: 535 NLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
L + + + P + + + K G ++ A E + LS K P+ Y +
Sbjct: 442 ALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGL 501
Query: 591 FNEGRHYEAKDLLYK------CPHHIRQDSKI 616
EG EA+ LLYK P++I D+ +
Sbjct: 502 CKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 10/233 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K + ++YN ++ SV + V ++M + ++ +Y + + K RM+++A
Sbjct: 311 GWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ L M + P + LL +S S+ DL R + G Y
Sbjct: 371 MVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRAS------GQPADLITY 424
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K +FD+A + + + G P+ TY+ ++ GLCK+GR + A + +
Sbjct: 425 NVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSA 484
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
GC P+I+T+ I+I G C +D A KM+ NY + D ++ L
Sbjct: 485 KGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRAIL 537
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 124/261 (47%), Gaps = 9/261 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N ++ L + V + +NVV M K G++ DI +Y + + + +A ++F+ M
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSV-YDGIHRALT 384
++ P+V L+ + D +V + NK N + +V Y+ + L+
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNK-----NLVPDTVTYNCLLDGLS 397
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR +++AM+ +G D ITY+ ++ K +F+ A + + E G P+I+
Sbjct: 398 KSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIR 457
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ IL+ G C + + A F + K + +++I+G + ++ A LL +M
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Query: 505 IEKVRLRPWQATFKTLIEKLL 525
+ L P TF T++ +L
Sbjct: 518 VNNNYL-PNYITFDTIVRAIL 537
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 150/341 (43%), Gaps = 14/341 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + N +L L R ++ ++ EM+K + T+ + K R +++A
Sbjct: 276 GGAVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEA 335
Query: 321 VKLFEFMMDGP------YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+++F+ + +P V + L+ + + + GL K ++ N +
Sbjct: 336 LQVFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNI-NRPNTV 394
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + K G FD A ++ + M G +P+ IT + ++ GLCK GR A +EM
Sbjct: 395 TYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEM 454
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G + T+T LI C N ++RA+ CF +M+ DA + LI+G R+
Sbjct: 455 KGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRM 514
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EP 551
N A ++V ++ ++ + LI ++LE LL M++ P
Sbjct: 515 NDA-SVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNT 573
Query: 552 FVQYISKFGTVEDASEFLKALSVKE--YPSSAAYLQVFESF 590
+ Y+ K G AS+ ++ + +KE PS Y + ++
Sbjct: 574 LISYLGKTGDFATASKVMEKM-IKEGLRPSVVTYGAIIHAY 613
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 123/288 (42%), Gaps = 8/288 (2%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ NT+TYN ++ + + + +M +EG + ++ T + K + AV+
Sbjct: 390 RPNTVTYNCLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVE 449
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGI 379
F M K + + L+ + +NN + R +E + G S VY +
Sbjct: 450 FFNEMKGKGLKGNAATYTALISAFCGVNN-----INRAMQCFEEMLSSGCSPDAVVYYSL 504
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L GR ++A ++ +K AGF D Y+ +I G CK + E +L EMEE G
Sbjct: 505 ISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGV 564
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+ LI + A KM+++ +I+ + S+K V+ K
Sbjct: 565 KPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMK 624
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ EM ++ P + LI+ L ++ A++L+ MK + P
Sbjct: 625 IFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRP 672
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/335 (22%), Positives = 137/335 (40%), Gaps = 40/335 (11%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A FR + E G + N IT N ++ L +H V EMK +G + + TY +
Sbjct: 411 RAHELFRQMNEE-GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTAL 469
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F + A++ FE M+ P L+ + + V V +K +
Sbjct: 470 ISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASV--VVSKLKLA 527
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G SL +S Y+ + K + + +++ M+ G +PD ITY+ +I L K G F A
Sbjct: 528 GFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATA 587
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAA------------------------------- 456
V+++M + G P + T+ +I +C+
Sbjct: 588 SKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILID 647
Query: 457 -----NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
N+VDRA+ M K + + ++ G +K ++ A++L+ M+E+ R
Sbjct: 648 ALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEA-CR 706
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
P T + L E L +E+ + + + +YP
Sbjct: 707 PDYITMEVLTEWLSAVGEIEKLKHFVEGYQDSSYP 741
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 147/356 (41%), Gaps = 30/356 (8%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKK--EGY----EMDIDTYIKISRQFQKFRMMEDAVKL 323
+G+LRVL + D +V++EM + G+ E+ ++ R F ++ KL
Sbjct: 178 HGLLRVLLKSGRAGDALHVLDEMPQANSGFSVTGEIVFGELVRSGRSFPDGEVVGLVAKL 237
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
E G + + L+ + N G+ + V + LG ++ + + + L
Sbjct: 238 GE---RGVFPDGFKLTQLVGKLCGDQKN---GVAWEVLHCVMRLGGAVDAASCNAL---L 288
Query: 384 TKLGRFDEAEKM---MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN--- 437
T LGR + ++M + M+ P +T+ ++ LCKA R ++A V D +
Sbjct: 289 TWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGS 348
Query: 438 ---GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD-ADADLLDVLINGFLSQKR 493
G PD+ + LI G C + + L +M N + + + LI+GF
Sbjct: 349 NWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGN 408
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
+ A++L +M E+ ++P T TL++ L R+ A+ MK + +
Sbjct: 409 FDRAHELFRQMNEE-GVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYT 467
Query: 554 QYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
IS F V + + F + LS P + Y + GR +A ++ K
Sbjct: 468 ALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSK 523
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 3/258 (1%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM+++G D TY + + +++A K+ + M+ + V + + +
Sbjct: 388 DEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEML--ARRLDVDEVTYTVLVDGYC 445
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+ F+V N G + + Y + L K G A +++ M N G E +
Sbjct: 446 KRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNAC 505
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I GLCKAG + A + +M+ G PD+ T+T LI C + E+DRA +M
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ +VL+NGF RV G KLL M+EK + P T+ +L+++
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEK-NIHPNATTYNSLMKQYCIGNN 624
Query: 530 LEEAMNLLRLMKKQNYPP 547
++ + + M +N P
Sbjct: 625 MKSTTEIYKGMCSRNVEP 642
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 148/356 (41%), Gaps = 41/356 (11%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
RW E G + +TY ++ L R +++ V++EM ++D TY + +
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K M +A ++ M+ P+V + L S D+ + ++ + G L
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTAL--SDGLCKQGDVQAANELLHEMSNKGLEL 502
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y+ + L K G D+A + M M AG +PD TY+ +I LCK+G + A ++L
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA------------- 478
EM +NG P I T+ +L+ G C + V+ M+EKN +A
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622
Query: 479 ----------------------DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ ++LI G + + A EMIEK R ++
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK-GFRLTASS 681
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKAL 572
+ LI L ++ EA L M+K+ + P+ + YI F ED E AL
Sbjct: 682 YSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYID-FNFNEDNLEATLAL 736
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 145/348 (41%), Gaps = 20/348 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +YN +L+VL V D + +EM D+ TY + + +E+AVKL
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEMASPP---DVVTYGILIHGYCALGELENAVKLL 317
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS---LSKSVYDGIHR 381
+ M+ +P+ + ++ + D G V E + + L ++VY +
Sbjct: 318 DDMVARGVEPNATVYTSVVALLC-----DKGRVSDALTVVEDMVHHKVILDEAVYTTVLS 372
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
G A + M+ G D +TY+ +I GLC+AG ++A VL EM
Sbjct: 373 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV 432
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D T+T+L+ G+C ++ A M+++ + L +G Q V A +LL
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SK 558
EM K L T+ +LI L A L++AM + M P + I K
Sbjct: 493 HEMSNK-GLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCK 551
Query: 559 FGTVEDASEFLKAL---SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G ++ A + L+ + +K P+ Y + F GR K LL
Sbjct: 552 SGELDRAHDLLQEMLDNGIK--PTIVTYNVLMNGFCMSGRVEGGKKLL 597
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 159/392 (40%), Gaps = 19/392 (4%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKAS 181
+ P++TVY+ ++ L +K + + M ++E Y ++L G K
Sbjct: 323 RGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKG---- 378
Query: 182 DLAALNQFHDGMV-KEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDM---KIELSDNFVL 236
DL + ++ D M K +A D V TL++ + + + K L++M ++++ D
Sbjct: 379 DLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV-DEVTY 437
Query: 237 TVLKELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
TVL + K F+ G N +TY + L + V+ ++ EM
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G E++ TY + K ++ A++ M KP V + L+ ++ D
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557
Query: 355 GLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
E L N + ++ Y+ + GR + +K+++ M P+ TY+
Sbjct: 558 AHDLL----QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYN 613
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ C + + M P+ T+ ILI+GHC A + A +M+EK
Sbjct: 614 SLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEK 673
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ A LI +K+ A KL +M
Sbjct: 674 GFRLTASSYSALIRLLNKKKKFVEARKLFHDM 705
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 137/341 (40%), Gaps = 25/341 (7%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
+K Y+ ++ L LK+ L+ M ++E TY ++ G K+ K A
Sbjct: 392 RKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMA 451
Query: 181 SDLAALNQFHDGMVKE-IAMDNVAKTLVDVVLGSDWDDKIGKKL----EDMKIELSDNFV 235
Q H+ MV+ +A + V T + L D + +L + +EL+
Sbjct: 452 EAF----QVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTY 507
Query: 236 LTVLKELRIYPVKALGFF----RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+++ L KA G+ R + + +G K + TY ++ L + + +++
Sbjct: 508 NSLINGL----CKA-GYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G + I TY + F +E KL E+M++ P+ + L++
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
NN + + S +++ Y+ + + K EA+ M GF
Sbjct: 623 NN--MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTAS 680
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCI--PDIKTWTI 448
+YS +I L K +F +A + +M + G PD+ + I
Sbjct: 681 SYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 2/247 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +TYN ++ + V ++ M + G DI +Y + F K + ++A
Sbjct: 325 GIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEA 384
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF+ M P V S L+ +S + + ++ ++ G + Y+ I
Sbjct: 385 MNLFKEMHRKNIIPDVVTYSSLIDGLSK--SGRISYALQLVDQMHDRGVPPNICTYNSIL 442
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K + D+A ++ K+ GF+PD TYS +I GLC++G+ EDA V +++ G
Sbjct: 443 DALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYN 502
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ +TI+IQG C + AL +KM + DA +++I + + A KL
Sbjct: 503 LDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKL 562
Query: 501 LVEMIEK 507
L EMI +
Sbjct: 563 LREMIAR 569
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 127/287 (44%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY +TIT+ + + L ++ + +++ G+ D +Y + K A
Sbjct: 150 GYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + + +P+V + ++ S+ + + F + ++ S G S Y +
Sbjct: 210 LDLLQRVDGNLVQPNVVMYNTIIDSMCKVKL--VNEAFDLFSEMVSKGISPDVVTYSALI 267
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
LG+ +A + M +PD T++ ++ CK G+ ++ V D M + G
Sbjct: 268 SGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIK 327
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+ L+ G+C EV++A F M + + D ++INGF K+ + A L
Sbjct: 328 PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNL 387
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM K + P T+ +LI+ L + R+ A+ L+ M + PP
Sbjct: 388 FKEMHRK-NIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPP 433
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 99/228 (43%), Gaps = 12/228 (5%)
Query: 333 KPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
KP++ +C++L+ LGL+ F V K +G + + + L G+
Sbjct: 117 KPNLVNCNILINCFCQ-----LGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+A + GF D I+Y +I GLCK G A ++L ++ N P++ + +
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C V+ A F++M+ K D LI+GF ++ A L +MI +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILE-N 290
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++P TF L+ +++E + +M KQ P FV Y S
Sbjct: 291 IKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP---NFVTYNS 335
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 127/348 (36%), Gaps = 74/348 (21%)
Query: 101 VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHC 160
+L + D + N C + + TV+ +M+ K +K +VT + + +C
Sbjct: 287 ILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM-----KQGIKPNFVTYNSLMDGYC 341
Query: 161 YIEEETYL-SILGVLKKAKKASDLAALNQFHDGMVKEIAMD---NVAK------TLVDVV 210
++E SI + + D+ + + +G K D N+ K + DVV
Sbjct: 342 LVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVV 401
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
S D + K ++ L ++ ++ G N TYN
Sbjct: 402 TYSSLIDGLSKSGRI-------SYALQLVDQMH---------------DRGVPPNICTYN 439
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
IL L + V ++ + K +G++ DI TY + + + +EDA K+FE
Sbjct: 440 SILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFE----- 494
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
LL++ G +L Y + + G F+
Sbjct: 495 ---------DLLVK-----------------------GYNLDVYAYTIMIQGFCVEGLFN 522
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
EA ++ M++ G PD TY +I L K + A +L EM G
Sbjct: 523 EALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARG 570
>gi|449436014|ref|XP_004135789.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Cucumis sativus]
Length = 460
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 150/354 (42%), Gaps = 45/354 (12%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P +AL F E G+KH+ +Y+ ++ LAR ++ ++ + ++
Sbjct: 62 PCEALALFENYHE-KGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFV 120
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ + + K ++E ++LF M PS FR +
Sbjct: 121 ALIQHYGKAHLVEKGIELFHQM------PSFN-------------------CFRTLQSFN 155
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
L N+L +F +A ++ + F P++++Y+ +I G K G +E
Sbjct: 156 VLLNTL------------VDCDQFSKASEIFQQAYEMDFRPNSVSYNIMIKGWIKKGGWE 203
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
ACN+ DEM E G P + T+ + C E+D AL F M EK + +A +L+
Sbjct: 204 QACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALCLFKNMTEKGHHPNAVTYALLM 263
Query: 486 NGFLSQKRVNGAYKLLVEM-IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
G+ + A KL+ +M +LRP + L+ L ++E +LL MKK+
Sbjct: 264 EGWCFIGKYKEAKKLMFDMEFHGCKLRP--VNYGVLMTHLGKTGNIDEMESLLNEMKKRR 321
Query: 545 YPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
P + V Y+ K G V DA + L + V P++A Y + + + N G
Sbjct: 322 LKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVGGCDPNAATYRMMIDGYCNAG 375
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 124/269 (46%), Gaps = 10/269 (3%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++ N+++YN +++ + N+ +EM ++G + + TY + M+ A+
Sbjct: 182 FRPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTAL 241
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----YESLGNSLSKSVYD 377
LF+ M + + P+ +LL+ I ++ A K E G L Y
Sbjct: 242 CLFKNMTEKGHHPNAVTYALLMEGWCFIGK------YKEAKKLMFDMEFHGCKLRPVNYG 295
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G DE E ++ MK +PD +TY+ ++ LCK G+ DA VL +M+
Sbjct: 296 VLMTHLGKTGNIDEMESLLNEMKKRRLKPDVVTYNILVNYLCKEGKVGDAYKVLVKMQVG 355
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+ T+ ++I G+C A + D A+ M+ + L+ G L + +
Sbjct: 356 GCDPNAATYRMMIDGYCNAGDFDGAMKILNAMLMSGHYPHLKTFASLVVGLLKGENNDDY 415
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++E +EK +LR T++ LI + G
Sbjct: 416 VCFVLEEMEKRQLRFDAETWRILIMDVCG 444
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 99/223 (44%), Gaps = 5/223 (2%)
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA + + GF+ +YS +I+ L ++ RFE +L + + + LI
Sbjct: 64 EALALFENYHEKGFKHHYPSYSSLIYKLARSRRFEAVETILGHLRNRNIRCNETLFVALI 123
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
Q + A+ V++ + F +M N +VL+N + + + A ++ + E +
Sbjct: 124 QHYGKAHLVEKGIELFHQMPSFNCFRTLQSFNVLLNTLVDCDQFSKASEIFQQAYE-MDF 182
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASE 567
RP ++ +I+ + E+A NL M ++ P F+ + + G ++ A
Sbjct: 183 RPNSVSYNIMIKGWIKKGGWEQACNLFDEMLEKGVQPSVVTYNSFLGVLCRKGEMDTALC 242
Query: 568 FLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
K ++ K +P++ Y + E + G++ EAK L++ H
Sbjct: 243 LFKNMTEKGHHPNAVTYALLMEGWCFIGKYKEAKKLMFDMEFH 285
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 154/352 (43%), Gaps = 10/352 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 48 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDALECFRLSREHKFWVPFDTCRKV 107
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYES 366
K + + ++ +++ Y S+ ++L+ L LVF K+
Sbjct: 108 LDHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLVFDAITKW-- 165
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S ++ + K+G DE ++ AM +G +PD TYS +I GLCK + ++
Sbjct: 166 -GLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDE 224
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + DEM E G +P+ T+T LI GHC ++D A+ + +++ + D + LI
Sbjct: 225 AHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIY 284
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF + + L+ EM K L+P + T+ TLI+ LE A + M ++N
Sbjct: 285 GFCKKGDLKQTRDLIDEMSMK-GLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIR 343
Query: 547 PFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEG 594
+ IS K G DA + L+ LSV P S Y V F G
Sbjct: 344 LDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNG 395
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 100/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + +++N ++ + + + + + M G + D+ TY + K M++A
Sbjct: 166 GLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCKESKMDEA 225
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M++ P+ + L+ N L L + + S G S Y+ +
Sbjct: 226 HELFDEMLEKGLVPNGVTFTTLIDG--HCKNGKLDLAMEIYKQILSQGLSPDLITYNTLI 283
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G + ++ M G +PD ITY+ +I G CK G E A +M E
Sbjct: 284 YGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIR 343
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D+ +++N F VN KL
Sbjct: 344 LDDVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKL 403
Query: 501 LVEM 504
L EM
Sbjct: 404 LKEM 407
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 79/185 (42%), Gaps = 2/185 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+ ++ ++ + + +++ +G D+ TY + F K ++
Sbjct: 236 GLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQT 295
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M KP + L+ S DL F K L VY +
Sbjct: 296 RDLIDEMSMKGLKPDKITYTTLIDG--SCKEGDLETAFEYRKKMIEENIRLDDVVYTALI 353
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K GR +AEKM++ M + G +PD+ TY+ V+ CK G +L EM+ +G +
Sbjct: 354 SGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHV 413
Query: 441 PDIKT 445
P + T
Sbjct: 414 PSVVT 418
>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
Length = 839
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 159/338 (47%), Gaps = 23/338 (6%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---HESVRDFW 286
SD+ V VL+ LR+ P +LGFF++V + ++ N +Y ++ +L+R ++ R +
Sbjct: 32 FSDDIVDAVLRNLRLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETRAYL 91
Query: 287 NVVEEMKKEGYEMDI--DTYIKISRQF----QKFRMM----------EDAVKLFEFMMDG 330
N + ++ K ++ D + + R+F F M+ ++A+ +F+ M
Sbjct: 92 NQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKC 151
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
PS++ C+ LL ++ + N + V + +G + + A K G+ D
Sbjct: 152 GRIPSLRSCNSLLNNL--VKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVD 209
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA +K M+N G EP+ +TY +I G G E A VL M E G ++ T+T+LI
Sbjct: 210 EAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLI 269
Query: 451 QGHCAANEVDRALLCFAKMMEK-NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+G+C ++D A M E+ D VLI+G+ +++ A +LL EM+ ++
Sbjct: 270 KGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEML-RLG 328
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+ +LI + EA ++ M N P
Sbjct: 329 LKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 366
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 151/361 (41%), Gaps = 9/361 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A GF + + E+ G + N +TY+ ++ V V++ M ++G ++ TY +
Sbjct: 210 EAAGFVKKM-ENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLL 268
Query: 308 SRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + K M++A K+ M + P + +L+ D + R+ ++
Sbjct: 269 IKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAV--RLLDEMLR 326
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG + + + + K G EAE ++ M + +PD+ +Y+ ++ G C+ G +
Sbjct: 327 LGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSE 386
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A N+ D+M + G P + T+ L++G C D AL + MM++ D L++
Sbjct: 387 AFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLD 446
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + GA L +++ + + TF T+I L ++ EA + MK
Sbjct: 447 GLFKMENFEGASTLWKDILAR-GFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCS 505
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNEGRHYEAKDL 602
P + I + + + K E PS Y + F R E DL
Sbjct: 506 PDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDL 565
Query: 603 L 603
L
Sbjct: 566 L 566
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 157/382 (41%), Gaps = 57/382 (14%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K ++ +YN +L R + +N+ ++M +EG E + TY + + + +DA++
Sbjct: 365 KPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQ 424
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKS--VYDG 378
++ MM P S LL + + N F A+ + L +KS ++
Sbjct: 425 IWHLMMKRGVAPDEVGYSTLLDGLFKMEN------FEGASTLWKDILARGFTKSRITFNT 478
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY--------------------------- 411
+ L K+G+ EAE++ MK+ G PD ITY
Sbjct: 479 MISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREP 538
Query: 412 --------SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ +I GL K+ R + ++L EM G P+I T+ LI G C +D+A
Sbjct: 539 ISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAF 598
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT---- 519
+ +M E A+ + +++G R++ A L+ +M++ + K+
Sbjct: 599 SSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRY 658
Query: 520 -LIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY- 577
I+K+ A L+E+ L Y + + K G V+DA F LS+K +
Sbjct: 659 AAIQKI--ADSLDESCKTFLLPNNIVY----NIAIAGLCKTGKVDDARRFFSMLSLKGFV 712
Query: 578 PSSAAYLQVFESFFNEGRHYEA 599
P + Y + + G EA
Sbjct: 713 PDNFTYCTLIHGYSAAGNVDEA 734
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 30/269 (11%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ L + + + +++ EM G +I TY + + K M++ A + M
Sbjct: 546 YNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMT 605
Query: 329 DGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKY---ESLG 368
+ ++ CS ++ + + PD + +Y + +
Sbjct: 606 ENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIA 665
Query: 369 NSLSKS----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+SL +S VY+ L K G+ D+A + + GF PDN TY +I G
Sbjct: 666 DSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGY 725
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
AG ++A + DEM G +P+I T+ LI G C + VDRA F K+ +K +
Sbjct: 726 SAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNV 785
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ LI+G+ ++ A+KL +MIE+
Sbjct: 786 VTYNTLIDGYCKIGNMDAAFKLKDKMIEE 814
Score = 45.8 bits (107), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 2/128 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA + F + + P L+ S+ N D FR+ ++ G + Y
Sbjct: 696 VDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEA--FRLRDEMLRRGLVPNIVTY 753
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K D A+++ + G P+ +TY+ +I G CK G + A + D+M E
Sbjct: 754 NALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813
Query: 437 NGCIPDIK 444
G P I+
Sbjct: 814 EGISPSIQ 821
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ R ++ + +VE+M+ EG +I T I + A
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300
Query: 321 VKLFE----FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ F +G K + S L+ ++ NN +G+ + ++ S G+S +Y
Sbjct: 301 LEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNN--VGMAMELFHEKMSEGHSPDAIMY 356
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ LT+ GR ++A M +MK AGF+ D Y+ +I G C+ R +A +L EM+E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ T+ L+ G C A + KM++ L++G+ +++
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
A ++L M E + P + TLI+ L ++ A+ L MK+++ P
Sbjct: 477 ALRILRSMDES-GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K N +TY+ ++ L +V + E EG+ D Y + + +EDA
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M + +K + ++L+ L + + + + +G Y+ +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFC--RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K G F ++++ M + G +P IT+ ++ G CK G+ ++A +L M+E+G P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI C +VD A+ F +M EK+ A+ + L+ G + A++L+
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552
Query: 503 EMIEKVRLRPWQATFKTLIEKL 524
+M E+ R P T L+E L
Sbjct: 553 QMREE-RCFPDYVTVDVLMEWL 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 37/236 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + I Y ++ L + + D ++ MK+ G+++D Y + F + + + +A
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L + M + +P V + LL S D V + K G S + +
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSG--SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF---------------- 424
K+G+ DEA +++++M +G P+N+ Y+ +I LCK G
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525
Query: 425 -------------------EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
E A ++D+M E C PD T +L++ E DR
Sbjct: 526 ANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 14/236 (5%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ I AL ++ ++ M+ A PD +TY ++ GLCKAGR DA VLD M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 435 --EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLS 490
++ PD+ T ++ G C + V AL + M + + + + LI+ F
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
++ AY+ LVE +E + T T++ L A R A+ R K+ +P
Sbjct: 259 VGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR-EKRTVWPEGKG 316
Query: 551 PFVQYISKFGT------VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
V Y + G V A E F + +S P + Y + GR +A
Sbjct: 317 NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
>gi|6633861|gb|AAF19720.1|AC008047_27 F2K11.2 [Arabidopsis thaliana]
Length = 332
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 29/323 (8%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE----------MDIDTYIKISR 309
+G + N +T+N ++ L R V + +V+ M +EG++ D+ I
Sbjct: 4 TGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTAIVD 63
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+ K +A LF M + P+V + ++ S R ++ + L +
Sbjct: 64 RLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSG--------RWSDADQLLRH 115
Query: 370 SLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ K + + + A K + EAE++ K M P ITY+ +I G CK R
Sbjct: 116 MIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 175
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+DA +LD M GC PD+ T++ LI G+C A VD + F +M + A+
Sbjct: 176 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 235
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LI+GF ++ A LL EMI + P TF ++ L + L +A +L ++K
Sbjct: 236 LIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 294
Query: 544 NYPP----FPEPFVQYISKFGTV 562
P F +I FG V
Sbjct: 295 EVCPRLIFFLFSLCSFILGFGEV 317
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 327 MMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRV---ANKYESLGNSLSKS---VYDG 378
M++ +P+V + L+ S+ L LV R+ ++ ++G S K+ +
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L K G A+ + M G P+ +TY+ +I C +GR+ DA +L M E
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 120
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PDI T++ LI +V A + +M+ + + +I+GF Q RV+ A
Sbjct: 121 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 180
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
++L M K P TF TLI A+R++ M + M ++ + I
Sbjct: 181 RMLDSMASK-GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 239
Query: 559 FGTVED 564
F V D
Sbjct: 240 FCQVGD 245
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 14/190 (7%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP----------DIKTWTI 448
M G P+ +T++ ++ LC+ GR +A ++D M E G P D+ T
Sbjct: 1 MVETGCRPNVVTFNTLMNSLCREGRVLEALALVDRMVEEGHQPNAMGQSHIKADVVISTA 60
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
++ C A F +M EK + + +I+ F R + A +LL MIEK
Sbjct: 61 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK- 119
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT---VEDA 565
++ P TF LI + R++ EA + + M + + P + I F V+DA
Sbjct: 120 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 179
Query: 566 SEFLKALSVK 575
L +++ K
Sbjct: 180 KRMLDSMASK 189
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
+F +A + ++D P + ++L+R + + +L V ++ +S G
Sbjct: 215 MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLG--ELASAQNVFDEMQSRGVR 272
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ ++ + + + G D AE + + M AG PD TY +I GLC+ GR EDA V
Sbjct: 273 RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGV 332
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
++M G P+ +TILI HC + + L +M E+ DA + ++NG
Sbjct: 333 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 392
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ + A ++VEM LRP T+ TLI+ L+ AM + + M +
Sbjct: 393 ARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV 451
Query: 551 PFVQYI---SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
+ I SK G DA L + + P + Y V ++F +G
Sbjct: 452 TYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 499
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 140/346 (40%), Gaps = 42/346 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +++N ++ + R + + M + G D+ TY + + + +EDA
Sbjct: 270 GVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDA 329
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+FE M KP+ +VF + +
Sbjct: 330 RGVFEKMCGRGMKPNA-------------------VVFTI------------------LI 352
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A K G + ++ + M+ G PD +TY+ ++ GLC+A + A ++ EM G
Sbjct: 353 DAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLR 412
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD T+T LI G+C E+D A+ M+ + D LI+G R A ++
Sbjct: 413 PDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERV 472
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L EM+E L P T+ +I+ ++ + LL+ M+ + P + +
Sbjct: 473 LGEMME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFC 531
Query: 558 KFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G +++A L A+ ++ P Y + + G+ + ++L
Sbjct: 532 KLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 577
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 127/288 (44%), Gaps = 7/288 (2%)
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
+F +A + ++D P + ++L+R + + +L V ++ +S G
Sbjct: 91 MSRFPTAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLG--ELASAQNVFDEMQSRGVR 148
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ ++ + + + G D AE + + M AG PD TY +I GLC+ GR EDA V
Sbjct: 149 RTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGV 208
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
++M G P+ +TILI HC + + L +M E+ DA + ++NG
Sbjct: 209 FEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 268
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ + A ++VEM LRP T+ TLI+ L+ AM + + M +
Sbjct: 269 ARDLKSASGIVVEM-RSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEV 327
Query: 551 PFVQYI---SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEG 594
+ I SK G DA L + + P + Y V ++F +G
Sbjct: 328 TYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKG 375
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/349 (21%), Positives = 141/349 (40%), Gaps = 42/349 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G + +++N ++ + R + + M + G D+ TY + + + +
Sbjct: 143 QSRGVRRTVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRI 202
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA +FE M KP+ +VF +
Sbjct: 203 EDARGVFEKMCGRGMKPNA-------------------VVFTI----------------- 226
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ A K G + ++ + M+ G PD +TY+ ++ GLC+A + A ++ EM
Sbjct: 227 -LIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD T+T LI G+C E+D A+ M+ + D LI+G R A
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
++L EM+E L P T+ +I+ ++ + LL+ M+ + P + +
Sbjct: 346 ERVLGEMME-AGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMN 404
Query: 555 YISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G +++A L A+ ++ P Y + + G+ + ++L
Sbjct: 405 GFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVTDIEEL 453
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/397 (20%), Positives = 177/397 (44%), Gaps = 38/397 (9%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+S V VLK + A FF W G+ H+ +Y+ ++ +L + W+ +
Sbjct: 72 ISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPGFDHSKESYHILVDILGSSKQFALLWDFL 131
Query: 290 EEMKK-EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
E+++ + +E+ + + R + + + DA++ F+ M++ KP++ D LL +
Sbjct: 132 IEIRESQDFEISPQVFWLVFRAYSRANLPSDAIRAFDRMVEFGLKPTIDDLDQLLYVLCK 191
Query: 349 INNPDLG--LVFRVANKYES--------------LGNSLSKS----------------VY 376
+ + RV +++++ +G S+S Y
Sbjct: 192 RKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAY 251
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A K G+ EA KM + M + G +PD T+S I C+A A VLDEM+
Sbjct: 252 NSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKR 311
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+P++ T+ +I+ C +V+ A +++E++ DA + ++ VN
Sbjct: 312 YDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNS 371
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L+ M++ L P + ++ L++ L+ R + A+ + M ++ + P + +
Sbjct: 372 ATRLISRMVKDNCL-PDKHSYNMLLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMV 430
Query: 557 ----SKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
K G +E+A ++ + + + P ++ +++ +
Sbjct: 431 HGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRN 467
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 107/498 (21%), Positives = 211/498 (42%), Gaps = 92/498 (18%)
Query: 68 SSLELILACDWSDELENKLE-----------ELSPKLTHESVVYVLRKLDNDPEKASAFF 116
SSL I +++ LE KL+ + S +TH+ + ++++ + DP+ A F
Sbjct: 95 SSLPWISPLNFTKPLEPKLDPPPEIVVAETRKKSKYITHDVAINLIKR-EKDPQHALKIF 153
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
N V ++K F ++ Y+ +L+ L + L +M + C E +++++ K
Sbjct: 154 NMVSEQKGFNHNNATYATILQKLAQFKKFQAVDRVLHQMTYEACKFHEGVFINLMKHYSK 213
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
+ +V+E + +++++ S+ D
Sbjct: 214 CGFHEKVFDAFLSIQTIVREKPSPKAISSCLNLLVDSNQVD------------------- 254
Query: 237 TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
++++L +Y ++L YK N +N +++ R + + VV+EM+
Sbjct: 255 -LVRKLLLYAKRSLV----------YKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSK 303
Query: 297 YEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
Y ++ TY + + +++A +LFE M+
Sbjct: 304 YSYPNVITYSTLMDGLCRNGRLKEAFELFEEMV--------------------------- 336
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+K + + + L+ Y+ + + G+ D A +++ MKN G P+ YS ++
Sbjct: 337 ------SKDQIVPDPLT---YNVLINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALV 387
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKAG+ +DA VL EM+ +G PD T+T LI ++D A+ +M E +
Sbjct: 388 DGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQ 447
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ------ATFKTLIEKLLGARR 529
AD +V++ G + R + A ++MIEK+ P Q +++ ++ L
Sbjct: 448 ADTVTFNVILGGLCREGRFDEA----LDMIEKL---PQQGVYLNKGSYRIVLNSLTQNCE 500
Query: 530 LEEAMNLLRLMKKQNYPP 547
L +A LL LM + + P
Sbjct: 501 LRKANKLLGLMLSRGFVP 518
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + G+ D A +++ M EPD+ TY+ +I GLC GR +A VLD+M
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMP---MEPDSYTYNTLIRGLCGRGRTGNALVVLDDML 183
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC+PD+ T+TIL++ C + +A+ +M K D +V++NG + RV+
Sbjct: 184 RRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVD 243
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A + L + + P ++ +++ L A R E+A L+ M ++ YPP F
Sbjct: 244 DAIEFL-KSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNML 302
Query: 553 VQYISKFGTVEDASEFLKALSVKEY---PSSAAYLQVFESFFNE 593
+ ++ + G VE A E L + +Y P+S +Y + +F +
Sbjct: 303 ISFLCRRGLVEPAMEVLD--QIPKYGCTPNSLSYNPILHAFCKQ 344
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 176/415 (42%), Gaps = 39/415 (9%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDL 183
P S Y+ ++R L + V L M C + TY +L K++ +
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211
Query: 184 AALNQFH-DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
L++ G +I NV VV G + ++ +E
Sbjct: 212 KLLDEMRAKGCAPDIITYNV------VVNGICQEGRVDDAIE------------------ 247
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
F + + H G + NT++YN +L+ L E D ++ EM ++GY ++
Sbjct: 248 ---------FLKSLPSH-GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVV 297
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
T+ + + ++E A+++ + + P+ + +L + D + F
Sbjct: 298 TFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF--VE 355
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
S G Y+ + AL + G D A +++ +K+ G P I+Y+ VI GL KAG
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ ++A +L+EM G PDI T++ + G C + ++ A+ F K+ + + L +
Sbjct: 416 KTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYN 475
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
++ G ++ + A L + MI + P ++T+ LIE L ++EA LL
Sbjct: 476 AILLGLCKRRETHNAIDLFIYMISNGCM-PNESTYTILIEGLTYEGLVKEARELL 529
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 3/283 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
++ TYN ++R L + V+++M + G D+ TY + K + A+KL
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL 214
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P + ++++ I D + F S G + Y+ + + L
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEF--LKSLPSHGCEPNTVSYNIVLKGLC 272
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
R+++AEK+M M G+ P+ +T++ +I LC+ G E A VLD++ + GC P+
Sbjct: 273 TAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSL 332
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
++ ++ C ++DRA+ M+ + D + L+ V+ A +LL ++
Sbjct: 333 SYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQL 392
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+K P ++ T+I+ L A + +EA+ LL M + P
Sbjct: 393 KDK-GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQP 434
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 138/320 (43%), Gaps = 10/320 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ITYN ++ + + V D ++ + G E + +Y + + EDA
Sbjct: 221 GCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDA 280
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
KL M Y P+V ++L+ + + P + ++ ++ KY NSLS Y+
Sbjct: 281 EKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIP-KYGCTPNSLS---YNP 336
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I A K + D A ++ M + G PD ++Y+ ++ LC+ G + A +L ++++ G
Sbjct: 337 ILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKG 396
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + ++ +I G A + AL +M+ K D + +G + R+ A
Sbjct: 397 CTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAI 456
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+ + ++ + +RP + ++ L R A++L M P + I
Sbjct: 457 RAFCK-VQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515
Query: 559 F---GTVEDASEFLKALSVK 575
G V++A E L L +
Sbjct: 516 LTYEGLVKEARELLGELCSR 535
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + R L GR A ++ M G PD +TY+ ++ CK ++ A +LDEM
Sbjct: 159 YNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 218
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC PDI T+ +++ G C VD A+ + + + ++++ G + +R
Sbjct: 219 AKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWE 278
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPF 552
A KL+ EM +K P TF LI L +E AM +L + K P P
Sbjct: 279 DAEKLMAEMSQK-GYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPI 337
Query: 553 VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K ++ A F++ + S YP +Y + + G A +LL++
Sbjct: 338 LHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 17/229 (7%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNIT--YSQVIFGLCKAGRFEDACNVLDEMEENG 438
R L + G +EA +++++M +G EP + +I LC +GR +A VL
Sbjct: 67 RGLVRRGDLEEALRLVESM--SGLEPSAAPGPCAALIKKLCASGRTAEARRVL-----AA 119
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C PD+ + ++ G+C ++D A A M + D+ + LI G + R A
Sbjct: 120 CEPDVMAYNAMVAGYCVTGQLDAARRLVADM---PMEPDSYTYNTLIRGLCGRGRTGNAL 176
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+L +M+ + + P T+ L+E ++AM LL M+ + P + V
Sbjct: 177 VVLDDMLRRGCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNG 235
Query: 556 ISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
I + G V+DA EFLK+L S P++ +Y V + R +A+ L+
Sbjct: 236 ICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 134/311 (43%), Gaps = 6/311 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + + YN ++ L R+ V + V M + G D TY + F + +
Sbjct: 222 ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEEL 281
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E A+++ + M+ + PSV CS ++ + + D FR+A LG + +
Sbjct: 282 EMALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKA--FRLACHLGELGMVPNLFACN 339
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K RF EAE++ + M N G EP+ +TY+ +I LCK G +DA + D M E
Sbjct: 340 ALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREK 399
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + + LI G+C + +A +M+EK A LI G + + A
Sbjct: 400 GIRVTVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L EM + TF TLI ++EA L M + P F ++
Sbjct: 460 MELHREMARN-GVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIE 518
Query: 555 YISKFGTVEDA 565
+ G V A
Sbjct: 519 GYCRVGNVRKA 529
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 113/275 (41%), Gaps = 41/275 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N N ++ L + R+ + M G E + TY + K MM+DA
Sbjct: 330 GMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDA 389
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ +F+ M + + +V Y SL N + +D H
Sbjct: 390 LCMFDRMREKGIRVTVY-------------------------PYNSLINGYCQ--HDNFH 422
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+A ++ M G P +YS +I GLC+ G A + EM NG
Sbjct: 423 ----------QARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVS 472
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ T+T LI G C +D A F KM++ + + +V+I G+ V A++L
Sbjct: 473 GNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQL 532
Query: 501 LVEMIEKVRLRPWQATFKTLIEKL---LGARRLEE 532
+M+++ L P T+++LI L LGA + +E
Sbjct: 533 YDQMVDR-GLTPDNYTYRSLISVLCLTLGAMKAKE 566
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 13/241 (5%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + VY RA ++ D A ++ M++ G + + Y+ +++GLC+ R +A V
Sbjct: 193 LDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ M E G + D T+ L+ G C E++ AL M+ ++ +++G
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ ++ A++L + E + + P LI+KL RR EA L R M + P
Sbjct: 313 RGHIDKAFRLACHLGE-LGMVPNLFACNALIDKLCKDRRFREAERLFRGMANRGLEPNEV 371
Query: 551 PF---VQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + + K G ++DA K + V YP Y + + ++A+ L
Sbjct: 372 TYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYP----YNSLINGYCQHDNFHQARGL 427
Query: 603 L 603
L
Sbjct: 428 L 428
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 165/389 (42%), Gaps = 35/389 (8%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D + ++A+ F+ + D P+ +++M+ ++++ + +M + +
Sbjct: 488 DGNMDEAARLFDKMIDSSVV-PNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNY 546
Query: 166 TYLSILGVL------KKAKKASD-----LAALNQFH-----DGMVKEIAMDNVAKTLVDV 209
TY S++ VL KAK+ D LN F G KE +
Sbjct: 547 TYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHI---- 602
Query: 210 VLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG-FFRWVGEHSGYKHNTIT 268
WD+ + +K++L +F + V L+++ + + FR + E G K + +
Sbjct: 603 -----WDEM---RARGVKLDLI-SFTVIVYAALKLHDGEKISVLFREMKE-KGVKPDNVF 652
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+ ++ V ++ E++ N ++M +G ++ TY + K + A L E M+
Sbjct: 653 HTCMIDVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEML 712
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
G + P+ + L +++ + V L N+++ ++ + + K G+
Sbjct: 713 VGRFLPNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVT---FNTLIKGFCKAGQ 769
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
A +M+ +GF PD I+YS +I LCK G A + +EM G PDI + I
Sbjct: 770 IQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNI 829
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LI+ E D+ L ++ M+ Y D
Sbjct: 830 LIRWCNIHGEFDKGLGIYSDMVNLKYADD 858
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/331 (21%), Positives = 132/331 (39%), Gaps = 11/331 (3%)
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
R RD +V+ G M T +I K R A LF+ M+ +
Sbjct: 137 RLRRARDAADVLRLSLSSGIAMKQYTASQILFALIKIRQFALARDLFDEMVQCKFPLDEY 196
Query: 338 DCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ +R+ I N D GL+ R+ ES G S Y+ + L + R EA ++
Sbjct: 197 VYTAGIRAYCEIRNLDGARGLLTRM----ESKGVKGSAVPYNVLMYGLCRNNRVLEAVEV 252
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+M G D +TY +++G C+ E A + D+M +P + + + ++ G
Sbjct: 253 KNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLHFVPSVASCSFMVDGLRK 312
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+D+A + E + + LI+ +R A +L M + L P +
Sbjct: 313 RGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAERLFRGMANR-GLEPNEV 371
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKAL 572
T+ LI L +++A+ + M+++ P+ I+ + ++ A L +
Sbjct: 372 TYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLINGYCQHDNFHQARGLLNEM 431
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K PS+A+Y + +G A +L
Sbjct: 432 VEKGLAPSAASYSPLIAGLCRKGDLASAMEL 462
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 121/306 (39%), Gaps = 34/306 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +Y+ ++ L R + + EM + G ++ T+ + F K M++A
Sbjct: 435 GLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCKDGNMDEA 494
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNP-----------DLGLV-----FR--VAN 362
+LF+ M+D P+ ++++ + N D GL +R ++
Sbjct: 495 ARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISV 554
Query: 363 KYESLGNSLSKSVYDGIHR--------ALTKL-------GRFDEAEKMMKAMKNAGFEPD 407
+LG +K D + +LT L GR E + M+ G + D
Sbjct: 555 LCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLD 614
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+++ +++ K E + EM+E G PD T +I H + +AL C+
Sbjct: 615 LISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQALNCWD 674
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
KM+ + VLIN ++ A L EM+ R P T+ ++ L
Sbjct: 675 KMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVG-RFLPNSFTYNCFLDFLANE 733
Query: 528 RRLEEA 533
LE+A
Sbjct: 734 GELEKA 739
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 105/259 (40%), Gaps = 8/259 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ + ++ + + + +++ +EM+ G ++D+ ++ I K E LF
Sbjct: 579 NSFSLTTLMYGFCKEGRLTETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLF 638
Query: 325 EFMMDGPYKPS--VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
M + KP C + + S ++ +K + G S + Y +
Sbjct: 639 REMKEKGVKPDNVFHTCMIDVHS----KEENIVQALNCWDKMIADGCSPNVVTYTVLINH 694
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K G A+ + + M F P++ TY+ + L G E A VL GC+ +
Sbjct: 695 LCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFLANEGELEKA-KVLHATILEGCLAN 753
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI+G C A ++ A+ E + D +IN +N A++L
Sbjct: 754 TVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCISYSTIINELCKVGDINKAFQLWN 813
Query: 503 EMIEKVRLRPWQATFKTLI 521
EM+ K L+P + LI
Sbjct: 814 EMLYK-GLKPDIVAYNILI 831
>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
Length = 599
Score = 102 bits (254), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I YN I++ + ++ ++ +M++EG++ ++ Y + F + R E + F
Sbjct: 123 IVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHR 182
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+ P+ +++ + N + + + + G S +K +Y I +
Sbjct: 183 LKACGLSPTAATYGCIVKLFTKAGN--MAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 240
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G F A K+ + M +AG +PD + Y+ ++ CKAGR + A VL+ +E N +P I+T+
Sbjct: 241 GDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETY 300
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T ++ G+ + +AL F ++ + L++G +++ A +L EM+
Sbjct: 301 TSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLA 360
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGTVE 563
+ P + ++ L E A +E+A + + MKK+N ++ K G ++
Sbjct: 361 N-GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQ 419
Query: 564 DASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLYKCPHH------IRQDSKI 616
A+E + ++ + Y + + + +G +A+DLL H I S I
Sbjct: 420 RAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFI 479
Query: 617 SLLFGSAKSNKVT 629
F S + +VT
Sbjct: 480 KACFRSGDTEEVT 492
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 154/341 (45%), Gaps = 15/341 (4%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K L FF + + G TY I+++ + ++ +++EEM K G + Y I
Sbjct: 175 KCLSFFHRL-KACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 233
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYE 365
+ + A K++E M+ KP + ++L+ + D LG++ +
Sbjct: 234 MDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIE---- 289
Query: 366 SLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
N L ++ Y I K G +A ++ +K AG P ++Y+ ++ GL KA +
Sbjct: 290 --ANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 347
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E+A +L+EM NG +P+ +++T L +G+ A +V++A F +M ++N D
Sbjct: 348 MENARLMLNEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGA 407
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L+ + A ++ + I L+ + T+ T+++ L +A +LL M+K
Sbjct: 408 LLKACCKSGAMQRAAEVF-QQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKH 466
Query: 544 NY---PPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSA 581
+ F++ + G E+ +E L + K+ +A
Sbjct: 467 GFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 507
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL F + + +G + ++YN +L LA+ + + ++ EM G + +Y +
Sbjct: 315 KALEVFDRI-KTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTAL 373
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ + + +E A +F+ M + LL++ G + R A ++ +
Sbjct: 374 TEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKS-----GAMQRAAEVFQQI 428
Query: 368 ---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G ++ Y + + G +A ++ M+ GF D I Y+ I ++G
Sbjct: 429 TDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDT 488
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
E+ L M E + +T+T LI G AA + D+A+ C+ + D+ L + L
Sbjct: 489 EEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCL 548
Query: 485 INGFLS 490
++G +S
Sbjct: 549 LSGLIS 554
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/282 (19%), Positives = 106/282 (37%), Gaps = 41/282 (14%)
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
FE M KP+V + L+ + + D+ + S G L+++V+ I
Sbjct: 40 FEAMRASHIKPNVHIYTSLIHAYAEAR--DMEGAVACTEEMLSQGIQLNEAVFCSIISGY 97
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G + AE + K P I Y+ ++ C+AG E +L +MEE G ++
Sbjct: 98 ASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNL 157
Query: 444 KTWTILIQG------------------HCAANEVDRALLCFAKMMEK--NYDADADLLD- 482
+T ++ G C + C K+ K N D+L+
Sbjct: 158 GLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEE 217
Query: 483 --------------VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
++++G+ A+K+ +M+ L+P + L+ A
Sbjct: 218 MDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV-SAGLKPDIVIYNILVHAFCKAG 276
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
R+++A+ +L ++ P E + + + G ++ A E
Sbjct: 277 RMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALE 318
>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
Length = 713
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I YN I++ + ++ ++ +M++EG++ ++ Y + F + R E + F
Sbjct: 237 IVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHR 296
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
+ P+ +++ + N + + + + G S +K +Y I +
Sbjct: 297 LKACGLSPTAATYGCIVKLFTKAGN--MAKALDILEEMDKHGVSPNKMIYAMIMDGYARG 354
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G F A K+ + M +AG +PD +TY+ ++ CKAGR + A VL+ ++ N +P I+T+
Sbjct: 355 GDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETY 414
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T ++ G+ + +AL F ++ + L++G +++ A +L EM+
Sbjct: 415 TSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLA 474
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGTVE 563
+ P + ++ L E A +E+A + + MKK+N ++ K G ++
Sbjct: 475 N-GVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQ 533
Query: 564 DASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLYKCPHH------IRQDSKI 616
A E + ++ + Y + + + +G +A+DLL H I S I
Sbjct: 534 RAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFI 593
Query: 617 SLLFGSAKSNKVT 629
F S + +VT
Sbjct: 594 KACFRSGDTEEVT 606
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 159/344 (46%), Gaps = 21/344 (6%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
K L FF + + G TY I+++ + ++ +++EEM K G + Y I
Sbjct: 289 KCLSFFHRL-KACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMI 347
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYE 365
+ + A K++E M+ KP + ++L+ + D LG++ +
Sbjct: 348 MDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQ---- 403
Query: 366 SLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
N L ++ Y I K G +A ++ +K AG P ++Y+ ++ GL KA +
Sbjct: 404 --ANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 461
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E+A +LDEM NG +P+ +++T L +G+ A +V++A F +M ++N D V
Sbjct: 462 MENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDI----V 517
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L +GA + VE+ +++ L+ + T+ T+++ L +A +LL+ M
Sbjct: 518 AYGALLKACCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDM 577
Query: 541 KKQNY---PPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSA 581
+K + F++ + G E+ +E L + K+ +A
Sbjct: 578 QKHGFHLDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNA 621
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/243 (21%), Positives = 106/243 (43%), Gaps = 3/243 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL F + + +G + ++YN +L LA+ + + +++EM G + +Y +
Sbjct: 429 KALEVFDRI-KTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTAL 487
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ + + +E A +F+ M + LL++ + + V +
Sbjct: 488 TEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACC--KSGAMQRAVEVFQQITDA 545
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G ++ Y + + G +A ++K M+ GF D I Y+ I ++G E+
Sbjct: 546 GLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEV 605
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L M E + +T+T LI G AA + D+A+ C+ + D+ L + L++G
Sbjct: 606 TETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSALSNCLLSG 665
Query: 488 FLS 490
+S
Sbjct: 666 LIS 668
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/330 (19%), Positives = 123/330 (37%), Gaps = 59/330 (17%)
Query: 294 KEGYEMDIDTYIKISRQFQ--------KFRMMED----------AVKLFEFMMDGPYKPS 335
+E E+D + KI FQ ++ ++ D A FE M KP+
Sbjct: 106 RETMEIDAGNWHKIVNAFQVIDKPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPN 165
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
V + L+ + + D+ + S G L+++V+ I G + AE
Sbjct: 166 VHIYTSLIHAYAEAR--DMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHW 223
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG--- 452
+ K P I Y+ ++ C+AG E +L +MEE G ++ +T ++ G
Sbjct: 224 FEKFKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAE 283
Query: 453 ---------------HCAANEVDRALLCFAKMMEK--NYDADADLLD------------- 482
C + C K+ K N D+L+
Sbjct: 284 IRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMI 343
Query: 483 --VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
++++G+ A+K+ +M+ L+P T+ L+ A R+++A+ +L +
Sbjct: 344 YAMIMDGYARGGDFTAAFKVWEDMV-SAGLKPDIVTYNILVHAFCKAGRMDKALGVLENI 402
Query: 541 KKQNYPPFPEPFVQYISKF---GTVEDASE 567
+ P E + + + G ++ A E
Sbjct: 403 QANRLLPTIETYTSILDGYVKGGHIQKALE 432
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 147/317 (46%), Gaps = 40/317 (12%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE-- 291
++ VL +R P AL FFRW +G+K + +TY IL +LAR+ +R + V+E+
Sbjct: 49 LLVRVLNTVRHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVV 108
Query: 292 -MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+K E +D+ + + K M+E + +F M+ P +++C+ +LR + +
Sbjct: 109 SVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRD 168
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ D A ++ M G P +T
Sbjct: 169 SS------------------------------------IDVAREVYNVMVECGIRPTVVT 192
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++ CK G+ ++A +L +M++ GC+P+ T+ +L+ G + E+++A +M+
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ A D LI G+ + +++ A +L EM+ + + P T+ T++ L R+
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAV-PTLVTYNTIMYGLCKWGRV 311
Query: 531 EEAMNLLRLMKKQNYPP 547
+A LL +M +N P
Sbjct: 312 SDARKLLDVMVNKNLMP 328
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 129/287 (44%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ L R + + +EM K G + D+ T+ + R F K + A
Sbjct: 360 GLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMA 419
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M++ +P + + R + + D F + + + G Y+
Sbjct: 420 KELFDEMLNRGLQPD--RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L KLG EA +++K M G PD++TY+ +I AG A V EM G
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+T+LI + + A+L F +M EK + + LING ++++ AYK
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM K + P + T+ LI + +EA+ L + M + P
Sbjct: 598 FTEMQAK-GISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 19/341 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ L+ + +++EM + G E+ TY + R + + +++A +L
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV------YDG 378
E M+ P++ + ++ + RV++ + L ++K++ Y+
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWG--------RVSDARKLLDVMVNKNLMPDLVSYNT 335
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ T+LG EA + ++ G P +TY+ +I GLC+ G + A + DEM ++G
Sbjct: 336 LIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHG 395
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD+ T+TIL++G C + A F +M+ + D I G L + A+
Sbjct: 396 PDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 455
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+ EM+ + P T+ I+ L L+EA L++ M P + I
Sbjct: 456 GMQEEMLAR-GFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHA 514
Query: 559 F---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
G + A + FL+ LS +PS Y + S+ GR
Sbjct: 515 HLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 157/374 (41%), Gaps = 49/374 (13%)
Query: 270 NGILRVLARHES----VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
N +LR+L +S R+ +NV+ E G + TY + F K +++A++L
Sbjct: 158 NRVLRLLRDRDSSIDVAREVYNVMVEC---GIRPTVVTYNTMLDSFCKQGKVQEALQLLL 214
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M P+ ++L+ +S ++ +L + + LG +S YD + R +
Sbjct: 215 QMQKMGCLPNDVTYNVLVNGLS--HSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCE 272
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD------------- 432
G+ DEA ++ + M + G P +TY+ +++GLCK GR DA +LD
Sbjct: 273 KGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVS 332
Query: 433 ----------------------EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
E+ G +P + T+ LI G C ++D A+ +M+
Sbjct: 333 YNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMI 392
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ D D +L+ GF + A +L EM+ + L+P + + T I L
Sbjct: 393 KHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR-GLQPDRFAYITRIVGELKLGDP 451
Query: 531 EEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQV 586
+A + M + +PP F+ + K G +++ASE +K + P Y +
Sbjct: 452 SKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSI 511
Query: 587 FESFFNEGRHYEAK 600
+ G +A+
Sbjct: 512 IHAHLMAGHLRKAR 525
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 81/192 (42%), Gaps = 8/192 (4%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISS 348
EEM G+ D+ TY K +++A +L + M+ +G V S++ + +
Sbjct: 459 EEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMA 518
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ VF E L + SV Y + + GR A M G P
Sbjct: 519 GHLRKARAVF-----LEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHP 573
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ ITY+ +I GLCK + + A EM+ G P+ T+TILI +C AL +
Sbjct: 574 NVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLY 633
Query: 467 AKMMEKNYDADA 478
M+++ D+
Sbjct: 634 KDMLDREIQPDS 645
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 187/432 (43%), Gaps = 53/432 (12%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
D++ ++ M + L + + ++ RI +AL F+ +GE N ITYN ++ L
Sbjct: 23 DEMKERGVKMDVLLHSTLIQGLCRKGRID--EALEQFKSMGEEC--SPNVITYNTVVNGL 78
Query: 277 ARHESVRDFWNVVEEMKK-----EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+ + + + ++M+K G E D+ +Y + K + ++ A + F+ M
Sbjct: 79 CKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG 138
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALTKLGRFD 390
P+V S L+ + ++ D + K E + + +++ Y+ + + G+
Sbjct: 139 CAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDM---VPRAMYYNAVVNGFKRQGKPS 195
Query: 391 EAEKMMKAMKNAGF-----------------------------------EPDNITYSQVI 415
E +++ MK GF +P+ +TY+ +
Sbjct: 196 ECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAV 255
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCKAG+ ++A +L EM E+ PD+ T++ +I G C A +D+A F +MM
Sbjct: 256 HGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECI 315
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
L++GF K+ A+++ +M+ P T+ L++ + GA +E A+
Sbjct: 316 PHPVTFMTLLHGFSEHKKSREAFRVHEDMV-NAGFIPGLQTYNVLMDCVCGADSVESALE 374
Query: 536 LLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFF 591
+ MK++ P P +Q + + V++A EFL + P+ A + E
Sbjct: 375 IYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLC 434
Query: 592 NEGRHYEAKDLL 603
+G EA +L
Sbjct: 435 KQGEVDEACSVL 446
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 88/341 (25%), Positives = 152/341 (44%), Gaps = 26/341 (7%)
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
Y + F K ++ A +L + M + K V S L++ + D L +
Sbjct: 2 YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEAL-----EQ 56
Query: 364 YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK-----NAGFEPDNITYSQVIF 416
++S+G S +V Y+ + L K R DE ++ M+ + G EPD I+YS VI
Sbjct: 57 FKSMGEECSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVID 116
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LCKA R + A M GC P++ T++ LI G C + VD A ++ ++
Sbjct: 117 ALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP 176
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQATFKTLIEKLLGARRLEEA 533
A + ++NGF Q + + +LL+ M EK + + + A L + + +
Sbjct: 177 RAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFF 236
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFN 592
LL+ KK N + V + K G V++A L+ + K P Y + + F
Sbjct: 237 ERLLKSGKKPNVVTY-NVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCK 295
Query: 593 EGRHYEAKD-----LLYKC-PHHIRQDSKISLLFGSAKSNK 627
GR +A D ++++C PH + + ++LL G ++ K
Sbjct: 296 AGRMDKADDVFTRMMVHECIPHPV---TFMTLLHGFSEHKK 333
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 101/204 (49%), Gaps = 9/204 (4%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G+ D+A +++ MK G + D + +S +I GLC+ GR ++A M
Sbjct: 1 MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA----DADLL--DVLINGF 488
E C P++ T+ ++ G C AN +D L F MEK Y+A + D++ +I+
Sbjct: 61 GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDD-MEKRYEASHGCEPDVISYSTVIDAL 118
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+RV+ AY+ M V P T+ +LI+ L R++EA +LL +K ++ P
Sbjct: 119 CKAQRVDKAYEYFKRM-RAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPR 177
Query: 549 PEPFVQYISKFGTVEDASEFLKAL 572
+ ++ F SE L+ L
Sbjct: 178 AMYYNAVVNGFKRQGKPSECLELL 201
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/394 (20%), Positives = 140/394 (35%), Gaps = 81/394 (20%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+++ EKA FF + K +P+ Y++ + L + + + L M E +
Sbjct: 226 NDEQEKACQFFERLL-KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVI 284
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
TY SI+ DG K MD
Sbjct: 285 TYSSII-------------------DGFCKAGRMDKA----------------------- 302
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH---------------SGYKHNTITYN 270
D F ++ E +PV + EH +G+ TYN
Sbjct: 303 -----DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 357
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++ + +SV + +MK++ + D +TY + + + R +++A + + M
Sbjct: 358 VLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEAD 417
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
P+ C L+ + D SV D + + K G D
Sbjct: 418 NVVPNGAICHALVEVLCKQGEVDEAC-----------------SVLDNVVE-ICKAGEPD 459
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA ++++ M G PD TY V+ LC R + A ++M GC P + T+T+LI
Sbjct: 460 EAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLI 519
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
C+A+ D A F M+ + A + L
Sbjct: 520 GEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL 553
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 151/379 (39%), Gaps = 62/379 (16%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA FF + + SG K N +TYN + L + V + + ++ EM + D+ TY I
Sbjct: 231 KACQFFERLLK-SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSI 289
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K M+ A +F MM V +C I +P + +L
Sbjct: 290 IDGFCKAGRMDKADDVFTRMM-------VHEC---------IPHP---------VTFMTL 324
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ S+ H+ + EA ++ + M NAGF P TY+ ++ +C A E A
Sbjct: 325 LHGFSE------HK------KSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESA 372
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ +M+ PD T+ LIQ C A VD A M N + + L+
Sbjct: 373 LEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEV 432
Query: 488 FLSQKRVNGAYKLL---------------VEMIEKVRL---RPWQATFKTLIEKLLGARR 529
Q V+ A +L VE+IE++ L RP +AT+ ++ L G R
Sbjct: 433 LCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDR 492
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKEYPSSAAYLQV 586
++ A+ M + P + I + + +DA +A+ + A ++
Sbjct: 493 VDSAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRT 552
Query: 587 FESFFNEGRHYEAKDLLYK 605
S + + +DLL +
Sbjct: 553 LSSCLRDAGY---QDLLVR 568
>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 873
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 203/473 (42%), Gaps = 18/473 (3%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
DN+ E+A N + + P + Y+ +L L + L Q L +MK +
Sbjct: 224 DNNTEEALRLINQM-GEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRN 282
Query: 166 TY-LSILGV--LKKAKKASDLAALNQFHDGMVKEI-AMDNVAKTLVDVVLGSDWDDKIGK 221
TY + + G LK K+A+++ L GM+ ++ + + + L D D ++
Sbjct: 283 TYNILVHGYCKLKWLKEAAEVIEL-MTGKGMLPDVWTYNTMVRGLCDEG-KIDEAVRLRD 340
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS--GYKHNTITYNGILRVLARH 279
K+E K+ + D L + + F+ V E G K N +T+N +++
Sbjct: 341 KMESFKL-VPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTE 399
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
+ + NV+ +M + G+ D TY + + K M +A K+ + M K
Sbjct: 400 GKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTL 459
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
+ LL ++ L + + K G L + Y + K + D A K+ + M
Sbjct: 460 NTLLHTMCL--EKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEM 517
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
K G ITY+ +I GLC +G+ + A + L+E+ E G +PD T I+I G+C V
Sbjct: 518 KETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAV 577
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA-TFK 518
++A KM+E + D ++L+ G + + L I K +P T+
Sbjct: 578 EKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKG--KPMDTVTYN 635
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEF 568
+I RRLE+A +L+ M+ +N P V ++K G E+A +
Sbjct: 636 IIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL 688
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 111/233 (47%), Gaps = 12/233 (5%)
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ +DAVKL +P+V ++L+ S NN + L R+ N+ G
Sbjct: 198 VFQDAVKL-------GVQPNVNTFNILIHGYCSDNNTEEAL--RLINQMGEYGCCPDNVT 248
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + AL K + + ++ MKN+G P+ TY+ ++ G CK ++A V++ M
Sbjct: 249 YNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMT 308
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G +PD+ T+ +++G C ++D A+ KM D + LI+G + +
Sbjct: 309 GKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSD 368
Query: 496 GAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A+KL+ EM K R ++ T +I+ +++EA N++ M + + P
Sbjct: 369 AAFKLVEEM--KARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSP 419
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 186/441 (42%), Gaps = 56/441 (12%)
Query: 111 KASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI 170
+A F+ +C +P+ ++ ++ L + + + L RM ED + TY +I
Sbjct: 68 EALDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122
Query: 171 L-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+ G+ K S L L + + + I D V + ++ W D +++ IE
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEE--LSHIKPDVV---IYSAIIDGLWKDGRHTDAQNLFIE 177
Query: 230 LSDNFVLTVLKELRIYPVKALGFF---RWVGEHSGYKH--------NTITYNGILRVLAR 278
+ D + ++ Y GF +W + + +T++G++ L +
Sbjct: 178 MQDK---GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVK 234
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ ++++EM G ++ T + ++DA+++F+ M + S+ D
Sbjct: 235 EGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-----QKSMMD 289
Query: 339 CSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ + + N PD+ Y+ + L G+F EAE++
Sbjct: 290 ----IDATHAFNGVEPDV-------------------QTYNILISGLINEGKFLEAEELY 326
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ M + G PD +TYS +I GLCK R ++A + D M P+I T+ LI G+C A
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
VD L F +M + A+A LI GF +NG+ + EMI + P T
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS-GVYPDTIT 445
Query: 517 FKTLIEKLLGARRLEEAMNLL 537
+ ++ L L++A+ +L
Sbjct: 446 IRNMLTGLWSKEELKKALAML 466
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y I + K+G A +++ M+ + +PD + YS +I GL K GR DA N+ EM
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++ G PDI T++ +I G C++ + A +M+ + D LIN + + +
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
N A LL EMI + P T TL++ L + +L++A+ + + M+K +
Sbjct: 239 NSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD------ID 291
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
F VE P Y + NEG+ EA++L + PH
Sbjct: 292 ATHAFNGVE--------------PDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 14/232 (6%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF P +T++ ++ GLC R +A ++ +M C P++ T+T L+ G C V A
Sbjct: 45 GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEA 100
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
+ +M+E + +++G A LL +M E ++P + +I+
Sbjct: 101 VALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIID 160
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-P 578
L R +A NL M+ + P + I+ F G +A L+ + V++ P
Sbjct: 161 GLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP 220
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAK 624
+ + + EG A+DLL + CP+ + ++ + L S K
Sbjct: 221 DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 440 IP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IP DI ++ ILI+ C+ +++ AL F K+ + + + L++G + RV+ A
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
L +M +P TF TL+ L R+ EA+ LL M + P + V
Sbjct: 71 DLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 556 ISKFGTVEDASEFLKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G A L+ + + P Y + + + +GRH +A++L
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A ++F+ M + P++ + L+ D GL +F + + N+++ Y
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT---YIT 413
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ R K+G + + + + M ++G PD IT ++ GL + A +L+E++
Sbjct: 414 LIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 162/364 (44%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
PV+AL R + N +TYN ++ V+ ++ EM+ + G D TY
Sbjct: 132 PVRALELLRQM-----PSPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTY 186
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +EDA K+F E + +G +P+ + L+ N ++ L +R +
Sbjct: 187 ATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYR--GE 244
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G S++ + Y+ L GR EA +++ M G PD TY+ +I G CK G+
Sbjct: 245 MVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGK 304
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI V F + + D + +
Sbjct: 305 EKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNA 364
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L RL+EA L+ M K+
Sbjct: 365 LINSHCTGGDMDRAFEIMGEM-EKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKR 423
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G ++DA + + K + P+ Y + + G+ +A
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDA 483
Query: 600 KDLL 603
+DL+
Sbjct: 484 EDLV 487
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 126/277 (45%), Gaps = 11/277 (3%)
Query: 253 FRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
R+ GE G TYN + L + +VEEM ++G D TY +
Sbjct: 239 LRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILING 298
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS---INNPDLGLVFRVANKYESL 367
+ K + A+K+FE M+ + +V + L+ ++S + D R+ N
Sbjct: 299 YCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETD-----RLFNDAVRR 353
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G +Y+ + + G D A ++M M+ PD++TY+ ++ GLC GR ++A
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+++EM + G PD+ ++ LI G+ ++ A+ +MM K ++ + +I G
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKG 473
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ A L+ EM+ + P +T+ +LIE L
Sbjct: 474 LCLNGQGGDAEDLVKEMVGN-GITPDDSTYISLIEGL 509
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 151/377 (40%), Gaps = 21/377 (5%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE-TYLSILGVLKKAKKASDLAA 185
P++ Y+ ++ + ++ +R M+E ++ TY +++ K K D
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDA-- 202
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD-----------DKIGKKLEDMKIELSDNF 234
+ D M+ E ++ A + + ++G D ++ + M + + F
Sbjct: 203 -TKVFDEMLTEGKVEPNA-VMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLF 260
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
V T+ E R AL +GE G + TYN ++ + + + E M
Sbjct: 261 VHTLFMEGRAAEAHAL--VEEMGE-KGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVG 317
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G + TY + M+++ +LF + +P + + L+ S D+
Sbjct: 318 KGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS--HCTGGDM 375
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
F + + E + Y+ + R L LGR DEA +++ M G +PD ++Y+ +
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I G G +DA V DEM G P + T+ +I+G C + A +M+
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495
Query: 475 DADADLLDVLINGFLSQ 491
D LI G ++
Sbjct: 496 TPDDSTYISLIEGLTTE 512
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 141/296 (47%), Gaps = 15/296 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + +T N ++ L + + + + + GY D+ T+ + + + +
Sbjct: 120 AGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIE 179
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---- 375
A KLF M P+V L++ + ++ N ++ L + ++ + N S V
Sbjct: 180 ATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKW-----HQEMLNDTSPYVFNCR 234
Query: 376 -----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y I L K+G ++EA + M + G +P+ +T+S +I LCK G+ A +
Sbjct: 235 PNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKL 294
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L+ M + G +P++ T+T LI+G C +++ A F M K Y+ D ++LING+
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+V A KL EM+ V + P T L++ L A ++++A L R++K P
Sbjct: 355 TLKVEEAMKLFNEMLH-VGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMP 409
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 115/249 (46%), Gaps = 6/249 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TY +++ + + M +GYE D+ +Y + + K +E+A
Sbjct: 302 GIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEA 361
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVY-DG 378
+KLF M+ P V+ +LL+++ D +FRV Y + ++ DG
Sbjct: 362 MKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDG 421
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
L K G EA K+ +++ + D T+ +I GLCKAG+ E A + +++ E G
Sbjct: 422 ----LCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEG 477
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
PD ++ +I G C +VD+A + F KM E D +L+ GF ++
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537
Query: 499 KLLVEMIEK 507
+LL MIEK
Sbjct: 538 QLLHRMIEK 546
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 105/259 (40%), Gaps = 12/259 (4%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K+ + + + K M AG PD +T + +I LC R + + + G IP
Sbjct: 100 GLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIP 159
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+T LI+G C + + A F +M + + LI G + +N A K
Sbjct: 160 DVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWH 219
Query: 502 VEMIEKV-----RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
EM+ RP ++ +I+ L EEA+ L M Q P F +
Sbjct: 220 QEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 279
Query: 554 QYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
+ K G V A + L+ + + P+ Y + + F G AK+L P +
Sbjct: 280 DMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYE 339
Query: 613 DSKIS---LLFGSAKSNKV 628
IS L+ G K+ KV
Sbjct: 340 PDVISYNMLINGYCKTLKV 358
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 11/204 (5%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
++++++ GL K + ++ +M G PD+ T ILI C N ++ L A +
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGI 152
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
M + Y D LI G + R+ A KL + M +K+ P T+ TLI+ L
Sbjct: 153 MRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM-QKLGCTPNVVTYGTLIKGLCALGN 211
Query: 530 LEEAMNLLRLMKKQNYPPF--PEP-------FVQYISKFGTVEDA-SEFLKALSVKEYPS 579
+ A+ + M P P + + K G E+A F + + P+
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271
Query: 580 SAAYLQVFESFFNEGRHYEAKDLL 603
+ + + EG+ +AK LL
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLL 295
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + K G+ D+A + + M+ G PD ITYS ++ G ++ + E +L M
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544
Query: 436 ENGCIPDIKTWTIL 449
E PD + I+
Sbjct: 545 EKDVWPDDGIYAIV 558
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/416 (22%), Positives = 191/416 (45%), Gaps = 14/416 (3%)
Query: 196 EIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
++A+D+ AK L +++ + +L+ + ++ + VL+ L + A FF
Sbjct: 29 DVAVDSFDPAKRLCKLIISCQKASGLELELDHSDLRVTPDVAERVLERLDNAGMLAYRFF 88
Query: 254 RWVGEH--SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
W + G H +Y+ ++ LA+ + W+VV M++EG ++++T+ I R++
Sbjct: 89 EWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWDVVAIMRREGV-VNVETFGIIMRKY 147
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ + ++AV F M P++ + LL ++ N + + +K N
Sbjct: 148 ARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCKSKN--VRKAQEIFDKMNGRFNPD 205
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+K+ Y + K + ++ M +AG +PD +TY ++ LCK GR E+A V+
Sbjct: 206 AKT-YSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVLVV 264
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+M GC P +++L+ + ++ A+ F M + D + + L+ F
Sbjct: 265 QDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKV 324
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
K+ A++++ +M E + P T+ ++ KL+ + +EA + R M K+ P +
Sbjct: 325 KKFENAFRVMDDM-EGHGIAPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPD-SDT 382
Query: 552 FVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I F VE A + K + +K++ PS + + ++G +A LL
Sbjct: 383 YTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 438
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 165/375 (44%), Gaps = 10/375 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + +L + + D +V++M + GY D T+ + +A
Sbjct: 150 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P++ +++ + + DL L + NK E+ +++ I
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL--NLLNKMEAAKIEADVVIFNTII 267
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + K M+ G P+ +TYS +I LC GR+ DA +L +M E
Sbjct: 268 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 327
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI + A + M++++ D D + L+NGF R++ A ++
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
M+ K P T+ TLI+ ++R+E+ L R M + + I
Sbjct: 388 FEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 560 --GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL-YKCPHHIRQDSK 615
G ++A + K + P Y + + N G+ +A ++ Y I+ D
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 616 I--SLLFGSAKSNKV 628
I +++ G K+ KV
Sbjct: 507 IYTTMIEGMCKAGKV 521
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ LF M+ PS+ + + LL +I+ + D+ V + K + L Y
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV--VISLGEKMQRLEIVHGLYTY 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + + A ++ M G+EP +T S ++ G C R DA ++D+M E
Sbjct: 124 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ + V++NG + +
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M E ++ F T+I+ L R +++A+NL + M+ + P + I
Sbjct: 244 ALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 557 S---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS+ L + K+ P+ + + ++F EG+ EA+ L
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ + + + ++M K + DI TY + F ++ A ++F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G +FR + +G++++ Y + + L
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGL 445
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G D A+K+ K M + G PD +TYS ++ GLC G+ E A V D M+++ DI
Sbjct: 446 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T +I+G C A +VD F + K + + +I+G S++ + AY LL +
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E L P T+ TLI L + L+R M+
Sbjct: 566 MKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMR 602
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
H TYN ++ R + ++ +M K GYE I T + + + + DAV L
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M++ Y+P + L+ + N + LV R+ + G + Y +
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGVVVN 233
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K G D A ++ M+ A E D + ++ +I LCK +DA N+ EME G P
Sbjct: 234 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 293
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ T++ LI C+ A + M+EK + + + LI+ F+ + + A KL
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
+MI++ + P T+ +L+ RL++A + M ++ P + I F
Sbjct: 354 DDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 562 ---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
VED +E + +S + + Y + + F++G
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 208/491 (42%), Gaps = 31/491 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + PS S +L + + + +M E + T+ +++ L KAS
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 207
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLG------SDWDDKIGKKLEDMKIELSDNFV 235
+ AL D MV+ N+ V VV G +D + K+E KIE
Sbjct: 208 EAVAL---VDRMVQRGCQPNLVTYGV-VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 263
Query: 236 LTVLKELRIY--PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
T++ L Y AL F+ + E G + N +TY+ ++ L + D ++ +M
Sbjct: 264 NTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
++ ++ T+ + F K +A KL++ M+ P + + L+ + D
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 382
Query: 354 LGLVFRVANKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ +E + +SK Y+ + + K R ++ ++ + M + G D
Sbjct: 383 -----KAKQMFEFM---VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 434
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY+ +I GL G ++A V +M +G PDI T++IL+ G C ++++AL F
Sbjct: 435 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 494
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M + D + +I G +V+ + L + K ++P T+ T+I L
Sbjct: 495 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSK 553
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYL 584
R L+EA LL+ MK+ P + I + G ++E ++ + + A+ +
Sbjct: 554 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613
Query: 585 QVFESFFNEGR 595
+ + ++GR
Sbjct: 614 GLVANMLHDGR 624
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 144/332 (43%), Gaps = 35/332 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A G F+ + E +G + N +TYN ++ L + + V + ++ MK + DI TY +
Sbjct: 219 AAGLFKKM-EEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANK---- 363
+ FR ++A L M P++ ++L+ +I + VF+ +
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 364 -----YESL--GNSLSKSV---------------------YDGIHRALTKLGRFDEAEKM 395
Y SL G SL + Y+ + + K R DEA+++
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQL 397
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M + G PDN+ Y+ +I GLC+ GR +A ++ M NG +PD+ T+++L+ G C
Sbjct: 398 FNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK 457
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ +A F M D + ++LI+ + A KL E+ + L P
Sbjct: 458 EGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQ-GLLPNVQ 516
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ T+I L L+EA+ R M+ PP
Sbjct: 517 IYTTIINNLCKEGLLDEALEAFRNMEGDGCPP 548
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 121/280 (43%), Gaps = 7/280 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P + S+L+ S + DL F V +K LG ++ + L K+G+F +A
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLA--FSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ + +G +P TY+ +I GLCK G A + +MEE GC P++ T+ ILI
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C V+ AL F+ M K D + LI G + +R A LL EM + + P
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEM-TSLNIMPN 304
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYISKFGTVEDASEFL 569
TF L++ + ++ EA + + M + P + Y + VE F
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
++ P + +Y + + + R EAK L + H
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQ 404
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 158/379 (41%), Gaps = 44/379 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVE---EMKKEGYEMDIDTYIKISRQFQKFRMM 317
G + + +T+N ++ L + V F VE + + G + + TY I K
Sbjct: 160 GLQPDAVTFNTLINGLCK---VGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGET 216
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISS---IN--------------NPDL------ 354
A LF+ M + +P+V ++L+ S+ +N +PD+
Sbjct: 217 TAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSL 276
Query: 355 --GLV-FRVANKYESLGNSLSK-------SVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
GL FR + +L N ++ ++ + A+ K G+ EA+ + K M G
Sbjct: 277 IQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGV 336
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
EPD +TYS +++G +A + D M GC PD ++ ILI+G+C A +D A
Sbjct: 337 EPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQ 396
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M+ + D + LI+G R+ A L M L P T+ L++
Sbjct: 397 LFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL-PDLFTYSMLLDGF 455
Query: 525 LGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSS 580
L +A L R+M+ P + + KFG ++DA + L V+ P+
Sbjct: 456 CKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNV 515
Query: 581 AAYLQVFESFFNEGRHYEA 599
Y + + EG EA
Sbjct: 516 QIYTTIINNLCKEGLLDEA 534
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 92/440 (20%), Positives = 168/440 (38%), Gaps = 72/440 (16%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K +P + ++ ++ L Q + C TY +I+ L K + +
Sbjct: 158 KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETT 217
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
A G+ K++ +V ++++ S DK+ + D + + +
Sbjct: 218 AAA-------GLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALD---------IFSYM 261
Query: 240 KELRIYP--------VKALGFFRWVGEHSGYKH---------NTITYNGILRVLARHESV 282
K RI P ++ L FR E S + N T+N ++ + + V
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ V + M + G E D+ TY + + + +A KLF+ M+ KP ++L
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
++ D ++ N+ G + Y+ + L +LGR EA+ + K M +
Sbjct: 382 IKGYCKAKRIDEAK--QLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSN 439
Query: 403 GFEPDNITYSQVIFG-----------------------------------LCKAGRFEDA 427
G PD TYS ++ G +CK G +DA
Sbjct: 440 GNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDA 499
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ E+ G +P+++ +T +I C +D AL F M D +V+I G
Sbjct: 500 RKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRG 559
Query: 488 FLSQKRVNGAYKLLVEMIEK 507
FL K + A +L+ EM ++
Sbjct: 560 FLQYKDESRAAQLIGEMRDR 579
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 145/368 (39%), Gaps = 35/368 (9%)
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKD-----SLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
+C K + ++S M ++ D SL Q RR KE + E T L+I+
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIM-- 302
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN 233
++ N D + KE + K + +M +E D
Sbjct: 303 -------PNIFTFNVLVDAICKEGKVSEAQGVF--------------KTMTEMGVE-PDV 340
Query: 234 FVLTVLK---ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+ L LR+ V+A F + G K + +YN +++ + + + + +
Sbjct: 341 VTYSSLMYGYSLRMEIVEARKLFDAM-ITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFN 399
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM +G D Y + + + +A LF+ M P + S+LL
Sbjct: 400 EMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK-- 457
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
LG FR+ +S ++Y+ + A+ K G +A K+ + G P+
Sbjct: 458 EGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQI 517
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I LCK G ++A ME +GC PD ++ ++I+G + RA +M
Sbjct: 518 YTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMR 577
Query: 471 EKNYDADA 478
++ + A+A
Sbjct: 578 DRGFVAEA 585
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 2/189 (1%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + + YN ++ L + +R+ ++ + M G D+ TY + F K +
Sbjct: 403 HQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A +LF M KP + ++L+ ++ N L ++ ++ G + +Y
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN--LKDARKLFSELFVQGLLPNVQIYTT 520
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I L K G DEA + + M+ G PD +Y+ +I G + A ++ EM + G
Sbjct: 521 IINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580
Query: 439 CIPDIKTWT 447
+ + T T
Sbjct: 581 FVAEAGTTT 589
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 97/237 (40%), Gaps = 39/237 (16%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLD-EMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
P I +++++ + K G++ A L +ME G PDI T +ILI VD A
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKR--------------------------VNGAY 498
F+KM++ DA + LING + +NG
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211
Query: 499 KL--------LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
K+ L + +E+ +P T+ LI+ L + + EA+++ MK + P
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIF 271
Query: 548 FPEPFVQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+Q + F ++AS L + S+ P+ + + ++ EG+ EA+ +
Sbjct: 272 TYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVF 328
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL FR + + K N ++++ ++ L + D V +EM G + D++ +
Sbjct: 29 RALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEMLGAGLQADVNVCNTL 88
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
+ M+ A +L M + V S L+ ++ L VF K
Sbjct: 89 IHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGC 148
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE- 425
+ +++ VY+ + L K G+ DEA ++++ M G PD TY+ VI L GR+E
Sbjct: 149 MPDTV---VYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEK 205
Query: 426 ----------------------------------DACNVLDEMEENGCIPDIKTWTILIQ 451
+AC++ DEM+ N C+PD+ T+ LI
Sbjct: 206 AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLID 265
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
A ++ AL A++++ + ++ + + LI+GF +V+ Y+L +MIE
Sbjct: 266 TLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIE-CSCF 324
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
P T+ L+ AM LL+ M ++ + P + ++ +S G VEDA
Sbjct: 325 PDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTL 384
Query: 569 LKALSVKEY 577
K + K +
Sbjct: 385 FKEMIAKGF 393
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 102/222 (45%), Gaps = 8/222 (3%)
Query: 268 TYNGILRVLA---RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
TYN ++ VL+ R+E F+ + MK+ + D+ TY + +K R ++A LF
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGM---MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 245
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P + L+ +++ + L + + +G+ + +Y+ +
Sbjct: 246 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL--EQSARLVKMGHVPNSYIYNALISGFC 303
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G+ D+ ++ + M PD+ITY+ ++ G + G A +L EM G P +
Sbjct: 304 RSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALA 363
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
T+ +LI+ A +V+ A F +M+ K ++ D L N
Sbjct: 364 TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 405
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENG-CIPDIKTWTILIQGHCAANEVDRALL 464
PD + Y+ +I G CKAG + A ++ +++ G C P+ ++ L+ C + AL
Sbjct: 9 PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F +M+ AD ++ + LI+ + A +LL M + T+ L++ L
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDV-FTYSYLMDAL 127
Query: 525 LGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKE-YPSS 580
A R +A+ + M+K P + + K G V++A E L+ ++ K P
Sbjct: 128 GKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 187
Query: 581 AAYLQVFESFFNEGRHYEA 599
Y V + + GR+ +A
Sbjct: 188 RTYNIVIDVLSSCGRYEKA 206
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 6/174 (3%)
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM-MEKNYDADADLLDVLINGFLSQKR 493
E C PD+ + LI G+C A + DRAL F ++ E + +A D L+ R
Sbjct: 3 ETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSR 62
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A + EM+ L+ TLI L +A LL M + +
Sbjct: 63 ATDALAVFQEML-GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYS 121
Query: 554 QYISKFGTVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G A++ L+ S + P + Y + +G+ EA +LL
Sbjct: 122 YLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELL 175
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 83/206 (40%), Gaps = 25/206 (12%)
Query: 160 CYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA---------KTLVDVV 210
C E+ Y S G++K+ K + D+ N +G+ K D K + D+
Sbjct: 200 CGRYEKAY-SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 258
Query: 211 LGSDWDDKIGK--KLEDMKIELSDNFV-LTVLKELRIYPVKALGFFRWVGEHSGYK---- 263
D + K ++ED +E S V + + IY GF R GY+
Sbjct: 259 TFGTLIDTLAKAGRMED-ALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQD 317
Query: 264 -------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
++ITY ++ +R +++EM +EG+ + TY + R
Sbjct: 318 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 377
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLL 342
+EDA LF+ M+ + P +Q S L
Sbjct: 378 VEDAYTLFKEMIAKGFNPDMQTYSAL 403
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 110/449 (24%), Positives = 195/449 (43%), Gaps = 32/449 (7%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
++FN + DK F P S ++ +L +V S Q+W R E ++ + Y S V
Sbjct: 115 SYFNEMVDKG-FVPGSNCFNNLLTFVVGSSSFNQWW---RFFNESKIKVDLDVY-SFGIV 169
Query: 174 LKKAKKASD-------LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDM 226
+K +A + L L +F G + + TL+D G +I +K +D+
Sbjct: 170 IKGCCEAGEIEKSFDLLVELREF--GFSPNVV---IYTTLID---GCCKRGEI-EKAKDL 220
Query: 227 KIEL------SDNFVLTVL-KELRIYPVKALGFFRWVG-EHSGYKHNTITYNGILRVLAR 278
E+ ++ + TVL L +K GF + + G N TYN ++ +
Sbjct: 221 FFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCK 280
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+D + + +EM++ G +I TY + + +A K+ + M P++
Sbjct: 281 DGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLIT 340
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ L+ + LG + +S G S S Y+ + K G A K++K
Sbjct: 341 YNTLIDGFCGVGK--LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M+ G +P ITY+ +I + E A + MEE G PD+ T+++LI G C +
Sbjct: 399 MEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQ 458
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
++ A F M+ K + + + + ++ G+ + A +L EM EK L P A+++
Sbjct: 459 MNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEK-ELPPNVASYR 517
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+IE L R+ +EA L+ M P
Sbjct: 518 YMIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 109/229 (47%), Gaps = 5/229 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + K GR +A K+ M+ G + +TY+ +I GLC+ + +A V+D+M
Sbjct: 270 TYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQM 329
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ +G P++ T+ LI G C ++ +AL + + ++L++GF +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDT 389
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+GA K++ EM E+ ++P + T+ LI+ +E+A+ L M++ P +
Sbjct: 390 SGAGKVVKEMEER-GIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSV 448
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
I F G + +AS K + K+ P+ Y + + EG Y A
Sbjct: 449 LIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRA 497
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 5/228 (2%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S + +Y + K G ++A+ + M G + TY+ +I GL K G +
Sbjct: 192 FGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQ 251
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ ++M+E+G P++ T+ ++ HC A F +M E+ + + LI
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + N A K++ +M + + P T+ TLI+ G +L +A++L R +K +
Sbjct: 312 GLCREMKANEANKVMDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLS 370
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
P + +S F G A + +K + + PS Y + ++F
Sbjct: 371 PSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTF 418
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 97/224 (43%), Gaps = 2/224 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N ITYN ++ + ++ ++K G + TY + F K A
Sbjct: 333 GINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGA 392
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
K+ + M + KPS ++L+ + + ++N + + R + E LG + Y +
Sbjct: 393 GKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR--SPMEELGLTPDVHTYSVLI 450
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G+ +EA ++ K M EP+ + Y+ ++ G CK G A + EMEE
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
P++ ++ +I+ C + A KM++ D +L+++
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 142/296 (47%), Gaps = 16/296 (5%)
Query: 257 GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
G+ S + ++YN ++ V +++ EM G D+ TY I K +
Sbjct: 184 GQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQE 240
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYESLGNSLSKS 374
++ A +F+ M++ KP+ + ++ + D+ G+ ++ +K G S
Sbjct: 241 VDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDK----GVKPSNV 296
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ I L K D AE + + M + G +PD++TY+ +I GLCKA + A V +M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G PD T+TI+I G C A VDRA F +M++K + + LI+G+LS
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLS---- 412
Query: 495 NGAYKLLVEMIEKVR---LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
G ++ +V+ I+++ L P T+ L++ L + EA +L M ++ P
Sbjct: 413 TGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKP 468
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 159/353 (45%), Gaps = 16/353 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +N ++ A+ + + ++ +MK++G ++ TY + K ++D
Sbjct: 499 NGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDD 558
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY-ESLGNSLSKSV--Y 376
AV F M++ P+ + L+ + +++ + +V + E L + + +
Sbjct: 559 AVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWE-----KVEELFLEMLNQGIRPDIVFF 613
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K GR EA +++ +M G +PD I+Y+ +I G C A R ++A +LD M
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P+I ++ L+ G+C A +D A F +M+ K + + ++NG R +
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 497 AYKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
A +L V MI+ +L W T+ +++ +EA + + + + F
Sbjct: 734 ARELYVNMIKSRKL--WSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIM 791
Query: 553 VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLY 604
+ + K G EDA + A+ PS Y + E+ EG E D L+
Sbjct: 792 IDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEG-SLEELDCLF 843
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/457 (22%), Positives = 203/457 (44%), Gaps = 22/457 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQ-FWVTLRRMKEDHCYIEEETYLSILGVL---KKA 177
K +R V + +L+ L + + + V LR+M E C + +Y ++L L ++A
Sbjct: 112 KTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRA 171
Query: 178 KKASDLAALNQFHDGMVKEIAMDNVAKTLV-DVVLGSDWDDKIGKKLEDMKIE---LSDN 233
++A +L L+ DG + D V+ +V + DK +M + ++ N
Sbjct: 172 EEAREL--LHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEMGVSPDVVTYN 229
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
++ L + + +A F+ + E G K N +TYN I+ L + + V V ++M
Sbjct: 230 TIIDGLCKAQEVD-RAEDVFQQMVE-KGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+G + TY I K + ++ A +F+ M+D KP + ++ + D
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347
Query: 354 L--GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
G+ ++ +K N + DG+ +A + D AE + + M + G +P+N TY
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS----VDRAEGVFQQMIDKGVKPNNGTY 403
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I G G++E+ + EM + PD+ T+ +L+ C + + A F M+
Sbjct: 404 NCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR 463
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + ++++G+ + ++ + LL M+ + P F T+I ++
Sbjct: 464 KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVAN-GISPNHRIFNTVICAYAKRAMID 522
Query: 532 EAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDA 565
E M++ MK+Q P + + + K G V+DA
Sbjct: 523 EVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDA 559
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/499 (21%), Positives = 190/499 (38%), Gaps = 59/499 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K +PS T+Y +ML K +L + L M + + ++ + AK+A
Sbjct: 463 RKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTV--ICAYAKRAM 520
Query: 182 DLAALNQFHDGMVKEIAMDNVAK--TLVDVVLGSDWDDKIGKKLEDMKIE--LSDNFVLT 237
++ F M ++ NV TL+D + D + M E +N V
Sbjct: 521 IDEVMHIFIK-MKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFN 579
Query: 238 VLKELRIYPVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
L +Y + + + V E + G + + + +N +L L + V + +++
Sbjct: 580 SL----VYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDS 635
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M G + D+ +Y + M++AVKL + M+ KP++
Sbjct: 636 MVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVS------------- 682
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
Y+ + K GR D A + + M G P TY
Sbjct: 683 ------------------------YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETY 718
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ GL ++GRF +A + M ++ + I T++I++ G C N D A F +
Sbjct: 719 NTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCS 778
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ D +++I+G R A L I L P T++ + E L+ LE
Sbjct: 779 MDLQLDIITFNIMIDGLFKGGRKEDAMDLFAA-IPANGLVPSVVTYRLIAENLIEEGSLE 837
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFE 588
E L +M+K P I K G + A +L L K + A+ +
Sbjct: 838 ELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897
Query: 589 SFFN-EGRHYEAKDLLYKC 606
S F+ E AK L KC
Sbjct: 898 SLFSREEYQQHAKSLPEKC 916
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSK- 373
+ DA+KLF+ ++ SV+ + LL +S ++ V R N ++
Sbjct: 24 LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83
Query: 374 -SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV-L 431
Y + ++GR + + G+ D+I +Q++ GLC R +A +V L
Sbjct: 84 CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143
Query: 432 DEMEENGCIPDIKTWTILIQGHC---AANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+M E GC + ++ L++G C A E L + + D +++INGF
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ +V+ AY L +EM + P T+ T+I+ L A+ ++ A ++ + M ++ P
Sbjct: 204 FNEGQVDKAYSLFLEM----GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKP 258
>gi|302798857|ref|XP_002981188.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
gi|300151242|gb|EFJ17889.1| hypothetical protein SELMODRAFT_420654 [Selaginella moellendorffii]
Length = 796
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 6/361 (1%)
Query: 189 FHDGMVKEIAMDN--VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
F + EI + N + ++ VV W ++ ++L+ + I S+ + VLK ++ P
Sbjct: 57 FRPSKLGEIGLSNADLISKILYVVRRPYWSPEVERELQLLDIRPSEFHINEVLKNIQ-EP 115
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A GFF+W+ Y +T +++ +L R + + V+ ++K + M Y
Sbjct: 116 DVANGFFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNT 175
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + + K +++A ++ M D P + + L+ S + V V ++ +
Sbjct: 176 LIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEK--VLEVYDEMQK 233
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G SL + Y+ + K+GR D A + + MK G +P+ + YS +I G K+GR E
Sbjct: 234 IGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEI 293
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+EM P + T+ LI+ +C + ++ L F M NY + + L++
Sbjct: 294 GTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVD 353
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
++ A + E + V L F LIE+ A + E A+ L R M+
Sbjct: 354 AHAKAGMLDAALEFY-ERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLR 412
Query: 547 P 547
P
Sbjct: 413 P 413
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 115/544 (21%), Positives = 228/544 (41%), Gaps = 34/544 (6%)
Query: 21 RSSSTRPLFTRVTHFF--HISSFTASNQSHTSQFHINTCQKIFFSTSPNSS--LELILAC 76
+ +S+R ++ V F+ + SF + F + +I S + S L ++
Sbjct: 24 QEASSRVIWAPVRFFYKEELPSFLLRADDDPAFFRPSKLGEIGLSNADLISKILYVVRRP 83
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
WS E+E +L+ L + + + VL+ + +P+ A+ FF W+ +K + PS+ +S++L
Sbjct: 84 YWSPEVERELQLLDIRPSEFHINEVLKNI-QEPDVANGFFQWIRRQKWYVPSTYSFSILL 142
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL-AALNQFHDG-MV 194
+ L +K D C + Y +++ V KA K + + D V
Sbjct: 143 NTYGRGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLDEAWGYYKEMQDSRCV 202
Query: 195 KEIAMDNVAKTLVDVVLGSD-----WDD--KIGKKLEDMKIELSDNFVLTVLKELRIYPV 247
+I N +L S+ +D+ KIG L+ + E+ V+ ++ +
Sbjct: 203 PDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEV----VVPHAGKVGRLDL 258
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+ F R E G++ N + Y+ ++ + + EEM+ + T+ +
Sbjct: 259 ACMLFERMKAE--GHQPNAVAYSALIAGQLKSGRLEIGTKYFEEMRSLEIRPLLGTFASL 316
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K +E +K F+ M YKP++ + L+ + + D L F + +
Sbjct: 317 IEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEF--YERMRGV 374
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G L ++ + + G+ + A ++ + M+ G P + T V+ + K G+++D
Sbjct: 375 GLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPSHFTCRIVVGAVAKGGKYDDV 434
Query: 428 CNVLDEMEENGC-IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+L EM+E G + D +I+ + A F K+ + L +++
Sbjct: 435 ERILFEMQEMGLNVADAVNDSIV--KLVDDKRISDAWELFLKVTGHGFTPHVSLCREILH 492
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQA----TFKTLIEKLLGARRLEEAMNLLRLMKK 542
GFLS + A ++L M RP A T+ L+E L RLE ++ M++
Sbjct: 493 GFLSCGDMEHARQMLSFM-----QRPGSAVDLRTYCMLLEFFLRGSRLEHEEVVMSFMRE 547
Query: 543 QNYP 546
+P
Sbjct: 548 TKHP 551
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 105/240 (43%), Gaps = 6/240 (2%)
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
Y PS S+LL + D V RV + ++ ++ Y+ + + K + DE
Sbjct: 131 YVPSTYSFSILLNTYG--RGKDFQAVQRVLSDLKADKCPMTTVAYNTLIKVYGKAHKLDE 188
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A K M+++ PD T++ ++ AG+ E V DEM++ GC D + +++
Sbjct: 189 AWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVP 248
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+D A + F +M + + +A LI G L R+ K EM + +R
Sbjct: 249 HAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM-RSLEIR 307
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEF 568
P TF +LIE + RLE + + M+ NY P V +K G ++ A EF
Sbjct: 308 PLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEF 367
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 164/394 (41%), Gaps = 54/394 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM------- 317
N ++YN ++ L + V + + EM +G+ +I TY + K + M
Sbjct: 138 NVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVL 197
Query: 318 ---------EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-----------------N 351
E+AV+L + M G +P V SLL+ I N
Sbjct: 198 QQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQN 257
Query: 352 PDLGLVFRVANKYESLG------NSLSKSVYDGIH----------RALTKLGRFDEAEKM 395
PD + + Y + G + L+ + DGI RA K D+A
Sbjct: 258 PDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTA 317
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M+ GF P+ +TY+ VI LCKAGR EDA + +M G PDI T+T LI G C
Sbjct: 318 FIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCT 377
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
E + +M+ + +A L+ +++ + RV A+ ++I V ++P
Sbjct: 378 IGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIH-VGVKPDVV 436
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL 572
++ LI+ +++E++ LL M P + ++ + G V+DA + +
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496
Query: 573 SVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K+ P++ Y + F+ GR A++ K
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMK 530
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 155/341 (45%), Gaps = 11/341 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+N ++R A++E++ EM+++G+ ++ TY + K +EDAV F M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356
Query: 328 MDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ P + + L+ + +I L F + N+ G + + I +L K
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINR----GIHPNAIFLNTIMDSLCK 412
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR EA + + G +PD ++Y+ +I G C G+ +++ +L M G PD T
Sbjct: 413 EGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVT 472
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
++ L+ G+C VD AL + +M K+ +A +++++G RV A + ++++
Sbjct: 473 YSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIV 532
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTV 562
+ ++ T+ ++ L ++EA+ + + ++ + + F + + K G +
Sbjct: 533 DS-GIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRI 591
Query: 563 EDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
DA A L P + Y + +S EG E+ +L
Sbjct: 592 GDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDEL 632
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 190/436 (43%), Gaps = 35/436 (8%)
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
V+++++R ++L + M++ TY +++ +L KA + D A++ F
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVED--AVSHFS 354
Query: 191 DGMVKEIAMDNVAKTLVDVVLG----SDWDDKIGKKLEDMKIELSDN-------FVLTVL 239
+ + ++ D + T ++ G +W KK+E + E+ + F+ T++
Sbjct: 355 QMVSEGLSPDII--TFTSLIHGLCTIGEW-----KKVEKLSFEMINRGIHPNAIFLNTIM 407
Query: 240 ----KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
KE R+ ++A FF + H G K + ++Y ++ + + ++ M
Sbjct: 408 DSLCKEGRV--LEAHDFFDQI-IHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSI 464
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G D TY + + K ++DA+ L+ M KP+ +++L +
Sbjct: 465 GLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAA 524
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
F + K G L + Y+ + L + DEA +M + +++ F+ + T++ +I
Sbjct: 525 REFYM--KIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFNIMI 582
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GL K GR DA ++ + +G +PD + ++IQ H ++ + F M +
Sbjct: 583 VGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKNGCT 642
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
A++ L+ ++ L + V A L ++ EK +A+ L+ ++ R+ ++ +
Sbjct: 643 ANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKE--YSVEASTAVLLISIVSERKYQKEVK 700
Query: 536 LLRLMKKQNYPPFPEP 551
L + Y F EP
Sbjct: 701 FL----PEKYQSFMEP 712
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 21/238 (8%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
AL + R A M A P+ ++Y+ VI GL K G + A + EM G P
Sbjct: 113 ALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPP 172
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEK----------------NYDADADLLDVLI 485
+I T+ +I G C A +D+A +M +K D +LI
Sbjct: 173 NIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLI 232
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ + R A + M+ + + P T++TL+ L + +LL LM +
Sbjct: 233 DYYCKIGRCTEARNIFDSMVRRGQ-NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGI 291
Query: 546 PPFPEPF---VQYISKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
P F ++ +K T++ A + F++ P+ Y V + GR +A
Sbjct: 292 PLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDA 349
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 7/287 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A + F+ M+ P+V ++L+R++ + L V G + Y
Sbjct: 138 LPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL--SVLRDMRGAGCDPNAVTY 195
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A + G D AE+++ M+ G +P+ +T++ V+ G+CKAGR EDA V DEM +
Sbjct: 196 NTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVK 255
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD ++ L+ G+C AL FA+M K D LI+ +
Sbjct: 256 EGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L+ EM E+ L+ + TF LI+ L++A+ +R M++ P + I
Sbjct: 316 AVGLVREMRER-GLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+ + G +++A E ++ + K P Y + ++ G + A
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 130/290 (44%), Gaps = 7/290 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G K N +T+N ++ + + + D V +EM KEG D +Y + + K +
Sbjct: 221 GGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHE 280
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYD 377
A+ +F M P V + L+ + N + +GLV + + G +++ +
Sbjct: 281 ALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRER----GLQMNEITFT 336
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G D+A ++ M+ +P + Y+ +I G C GR ++A ++ EME
Sbjct: 337 ALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAK 396
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ T++ ++ +C + A +M+E DA LI +KR+ A
Sbjct: 397 GVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ L MI + L+P + T+ +LI+ +E A++L M K P
Sbjct: 457 HVLFKNMIS-LGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLP 505
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 104/437 (23%), Positives = 177/437 (40%), Gaps = 48/437 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKAKKA 180
P+ Y++++R L + K+ LR M+ C TY +++ G + +A++
Sbjct: 155 PNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERL 214
Query: 181 SD----------LAALNQFHDGMVKEIAMDNVAKTLVDVVL------GSDWDDKIGKKLE 224
D L N +G+ K M++ K ++V G ++ +G
Sbjct: 215 VDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYC- 273
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
K+ S L+V E+ G + +T+ ++ V+ + ++
Sbjct: 274 --KVGCSHE-ALSVFAEM---------------TRKGIMPDVVTFTSLIHVMCKAGNLER 315
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+V EM++ G +M+ T+ + F K ++DA+ M +PSV + L+
Sbjct: 316 AVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALIN 375
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ D + + E+ G Y I A K G A ++ + M G
Sbjct: 376 GYCMVGRMDEA--RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD ITYS +I LC+ R DA + M G PD T+T LI GHC V+RAL
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+M++ D VLING R A +LL ++ + P A K + L
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHE---EPVPANIK--YDAL 548
Query: 525 LGARRLEEAMNLLRLMK 541
+ R E ++L L+K
Sbjct: 549 MRCCRNAELKSVLALLK 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 148/357 (41%), Gaps = 15/357 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +TYN ++ R V +V+ M++ G + ++ T+ + K MED
Sbjct: 186 AGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMED 245
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A K+F+ M+ P + L+ + L VF + + + ++ +
Sbjct: 246 ARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVT---FTS 302
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ + K G + A +++ M+ G + + IT++ +I G CK G +DA + EM +
Sbjct: 303 LIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCR 362
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + + LI G+C +D A +M K D +++ + + A+
Sbjct: 363 IQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAF 422
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI-- 556
+L +M+E L P T+ +LI L +RL +A L + M P + I
Sbjct: 423 QLNQQMLENGVL-PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDG 481
Query: 557 -SKFGTVEDA----SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
K G VE A E +KA P Y + R EA+ LL+K H
Sbjct: 482 HCKEGNVERALSLHDEMVKA---GVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYH 535
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 124/307 (40%), Gaps = 18/307 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + +TY+ IL ++ + + ++M + G D TY + R + + +
Sbjct: 394 EAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRL 453
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA LF+ M+ +P + L+ N + L ++ G Y
Sbjct: 454 GDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLH--DEMVKAGVLPDVVTYS 511
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF---------------GLCKAG 422
+ L+K R EA++++ + + P NI Y ++ G C G
Sbjct: 512 VLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKG 571
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A V + + D +++LI GHC V +AL +M++ + ++
Sbjct: 572 LMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTI 631
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LI G + V A +++ +++ L +A+ K LI+ L ++ +++L M +
Sbjct: 632 SLIRGLFEKGMVVEADQVIQQLLNCCSLADAEAS-KALIDLNLKEGNVDAVLDVLHGMAR 690
Query: 543 QNYPPFP 549
P P
Sbjct: 691 DGLLPSP 697
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 138/314 (43%), Gaps = 15/314 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ L V + + +EMK G D+ TY + F K ++E A
Sbjct: 450 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQA 509
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRS-ISSINNPDLGLVFRVANKYESLGNSLSKS-VYDG 378
F+ M PSV + LL + + + P +F N+++ S + DG
Sbjct: 510 RSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDG 569
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAG----FE--------PDNITYSQVIFGLCKAGRFED 426
+ +A + KM+ N G FE P+ +TY +I GLCKA + D
Sbjct: 570 LCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVD 629
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LD M NGC P+ + LI G C ++D A F +M + Y LI+
Sbjct: 630 AQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLID 689
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+R++ A K+L +M+E P T+ +I+ L ++A+ LL +M+K+
Sbjct: 690 AMFKDRRLDLAIKVLSQMLES-SCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCN 748
Query: 547 PFPEPFVQYISKFG 560
P + I G
Sbjct: 749 PNVVTYTSLIDGLG 762
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 173/408 (42%), Gaps = 26/408 (6%)
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
SD+D K + L + L+D V+ VL+ +R P + FF W GY H YN
Sbjct: 84 ASDFDGKAERFLRRHRDFLNDAVVVAVLRSVRT-PELCVRFFLWAERQVGYSHTGACYNA 142
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+ VL + R ++ E+ ++ E+ I R+ + A++ + D
Sbjct: 143 LAEVLHFDDRARTTERLLREIGEDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFG 202
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
Y+PS + L++ +++ D+G FRV + LG K +AL K GR+ +
Sbjct: 203 YRPSGATYNALVQVLATAGQMDMG--FRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSD 260
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A M++ F+ D + +Q+I GL +A F++A + L M N CIP++ T+ L+
Sbjct: 261 ALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLA 317
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G ++ + MM + + + L + L++ + + + AYKLL M
Sbjct: 318 GFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRM-AGCGCP 376
Query: 512 PWQATFKTLIEKLLGARRL-------------EEAMNLLRLMKKQNYPPFPEPFVQYISK 558
P + I + L EE + ++ K N F + +
Sbjct: 377 PGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVN----TANFARCLCG 432
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G + A + +K + K + P ++ Y +V +F E E LL++
Sbjct: 433 MGKFDKAFQIIKLMMRKGFVPDTSTYSKVI-TFLCEAMKVEKAFLLFQ 479
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 112/235 (47%), Gaps = 13/235 (5%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+YD + K+G+ D A+++ M G+ P TY+ +I + K R + A VL +M
Sbjct: 648 IYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQM 707
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E+ C P++ T+T +I G C E +AL + M ++ + + LI+G +V
Sbjct: 708 LESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKV 767
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ + +L +MI + P T++ LI A L+EA +LL MK+ +P + + +
Sbjct: 768 DMSLQLFTQMITQ-GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCS 826
Query: 555 YISKFGTVEDASEFLKALSVKEYPSS-------AAYLQVFESFFNEGRHYEAKDL 602
+ F + +F+ +L + E S Y + +SF GR +A +L
Sbjct: 827 VVQGF-----SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALEL 876
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 121/273 (44%), Gaps = 5/273 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L + + + ++ M EG + + + + R A KL
Sbjct: 308 NVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 367
Query: 325 EFMMDGPYKPSVQDCSLLLRSISS---INNPDL-GLVFRVANKYESLGNSLSKSVYDGIH 380
M P ++ + SI S + +PDL L +V + + L+K
Sbjct: 368 NRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 427
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L +G+FD+A +++K M GF PD TYS+VI LC+A + E A + EM+ G I
Sbjct: 428 RCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVI 487
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C +++A F +M L++ +L K+V A +
Sbjct: 488 PDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDI 547
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
M++ P T+ L++ L A ++A
Sbjct: 548 FHRMVD-AGCAPNTITYSALVDGLCKAGESQKA 579
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 108/253 (42%), Gaps = 38/253 (15%)
Query: 253 FRWVGEHS-GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F + GEH+ N +TY ++ L + V D +++ M G E + Y + F
Sbjct: 597 FYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGF 656
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K +++A ++F M Y P+V
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYLPTVH---------------------------------- 682
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + A+ K R D A K++ M + P+ +TY+ +I GLC+ G + A +L
Sbjct: 683 ---TYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
ME+ GC P++ T+T LI G + +VD +L F +M+ + + VLIN +
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAA 799
Query: 492 KRVNGAYKLLVEM 504
++ A+ LL EM
Sbjct: 800 GLLDEAHSLLSEM 812
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 138/322 (42%), Gaps = 16/322 (4%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V +G + N I Y+ ++ + + + V M K GY + TY + K R
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
++ A+K+ M++ P+V + ++ + I L ++ + E G + +
Sbjct: 696 RLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL--KLLSMMEKRGCNPNVVT 753
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G+ D + ++ M G P+ +TY +I C AG ++A ++L EM+
Sbjct: 754 YTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMK 813
Query: 436 ENGCIPDIKTWTILIQGHCA-----ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
+ W +QG+C+ + + +L ++ + A + +LI+ F
Sbjct: 814 QT-------YWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSK 866
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQA--TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
R+ A +L EM+E + T+ +LI+ L A +LE+A L + ++ P
Sbjct: 867 AGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPE 926
Query: 549 PEPFVQYISKFGTVEDASEFLK 570
F+ I V +E L+
Sbjct: 927 LSAFICLIKGLIKVNKWNEALQ 948
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 109/253 (43%), Gaps = 21/253 (8%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY ++ L R + ++ M+K G ++ TY + K ++ +++LF
Sbjct: 715 NVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLF 774
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-------YD 377
M+ P+ +L+ + GL+ ++ SL + + ++ Y
Sbjct: 775 TQMITQGCAPNYVTYRVLINHCCAA-----GLL----DEAHSLLSEMKQTYWPKYVQGYC 825
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + +K +F + +++ +++ G Y +I KAGR E A + EM E
Sbjct: 826 SVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEV 883
Query: 438 GCIPDIK---TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+I T+T LIQ C A+++++A ++++ K + LI G + +
Sbjct: 884 SSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKW 943
Query: 495 NGAYKLLVEMIEK 507
N A +L M ++
Sbjct: 944 NEALQLCYSMCDE 956
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 158/346 (45%), Gaps = 10/346 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E+SG + ITYN ++ + + V+E M D+ TY I R +
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMS---VAPDVVTYNTILRSLCDSGKL 224
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A+++ + + P V ++L+ + + N+ +G ++ ++ G Y+
Sbjct: 225 KEAMEVLDRQLQRECYPDVITYTILIEA--TCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 282
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K GR DEA K + M + G +P+ IT++ ++ +C GR+ DA +L +M
Sbjct: 283 VLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRK 342
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P + T+ ILI C + RA+ KM + ++ + L++GF +K+++ A
Sbjct: 343 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRA 402
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L M+ + P T+ TL+ L +++ A+ +L + + P + +
Sbjct: 403 IEYLEIMVSR-GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
++K G E A E L+ + K P Y + EG+ EA
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 163/394 (41%), Gaps = 47/394 (11%)
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY----------- 167
V ++ P Y+ +LR+L + LK+ L R + CY + TY
Sbjct: 198 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDS 257
Query: 168 -----LSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ +L ++K D+ N +G+ KE +D K L ++ G K
Sbjct: 258 GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNM-------PSYGCK 310
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE--------HSGYKHNTITYNGILR 274
++ N +L + RW+ G + +T+N ++
Sbjct: 311 PN----VITHNIILRSM----------CSTGRWMDAERLLSDMLRKGCSPSVVTFNILIN 356
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +V+E+M K G + +Y + F + + M+ A++ E M+ P
Sbjct: 357 FLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 416
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+ + LL ++ D + + N+ S G S Y+ + LTK+G+ + A +
Sbjct: 417 DIVTYNTLLTALCKDGKVDAAV--EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVE 474
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ M+ G +PD ITYS ++ GL + G+ ++A + +ME P T+ ++ G C
Sbjct: 475 LLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 534
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
A + RA+ A M+EK +LI G
Sbjct: 535 KAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 127/266 (47%), Gaps = 9/266 (3%)
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH-RALTKLGRFDEAEKMMKAMKN 401
L+ I S N DL ++ ++ G+ + IH R L + G +E K ++ M
Sbjct: 75 LQQIVSTPNGDLNVIGMESSPIGVNGSRSFEEFASNIHLRKLVRNGELEEGLKFLERMIY 134
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G PD I + +I G C++G+ + A +++ +E +G +PD+ T+ +LI G+C + E+D+
Sbjct: 135 QGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDK 194
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AL +M + D + ++ ++ A ++L +++ P T+ LI
Sbjct: 195 ALEVLERM---SVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQR-ECYPDVITYTILI 250
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEY 577
E + +AM LL M+K+ P + + I K G +++A +FL + S
Sbjct: 251 EATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCK 310
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P+ + + S + GR +A+ LL
Sbjct: 311 PNVITHNIILRSMCSTGRWMDAERLL 336
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 136/333 (40%), Gaps = 43/333 (12%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R+ + +E+ +K E M+ P V C+ L+R R+ E+ G
Sbjct: 114 RKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKAT--RIMEILENSG 171
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+ + K G D+A ++++ M A PD +TY+ ++ LC +G+ ++A
Sbjct: 172 AVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLKEAM 228
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
VLD + C PD+ T+TILI+ C + V +A+ +M +K D +VLING
Sbjct: 229 EVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 288
Query: 489 LSQKRVNGAYKLLVEM----------IEKVRLR------------------------PWQ 514
+ R++ A K L M + LR P
Sbjct: 289 CKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSV 348
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLKA 571
TF LI L R L A+++L M K P P + + ++ A E+L+
Sbjct: 349 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEI 408
Query: 572 L-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ S YP Y + + +G+ A ++L
Sbjct: 409 MVSRGCYPDIVTYNTLLTALCKDGKVDAAVEIL 441
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 143/318 (44%), Gaps = 38/318 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVE-EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN ILR L +++ V++ ++++E Y D+ TY + + A+KL
Sbjct: 207 DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYP-DVITYTILIEATCNDSGVGQAMKL 265
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M KP V ++L+ I D + F N S G + ++ I R++
Sbjct: 266 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF--LNNMPSYGCKPNVITHNIILRSM 323
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
GR+ +AE+++ M G P +T++ +I LC+ A +VL++M ++GC+P+
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL-- 501
++ L+ G C ++DRA+ M+ + D + L+ +V+ A ++L
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443
Query: 502 -----------------------------VEMIEKVR---LRPWQATFKTLIEKLLGARR 529
VE++E++R L+P T+ TL+ L +
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 530 LEEAMNLLRLMKKQNYPP 547
++EA+ + M+ + P
Sbjct: 504 VDEAIKIFHDMEGLSIKP 521
>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 172/426 (40%), Gaps = 82/426 (19%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FFR + E +G N + Y + L + V+ ++V+EEM G + ++ T+ +
Sbjct: 130 FFRRMLE-TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 188
Query: 312 QKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESL 367
K E A +LF + + YKP+V ++++ + ++ LV V +
Sbjct: 189 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 248
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N+ + + G H K G FD A ++M MK GF P+ TY+ VI G CK G+ ++A
Sbjct: 249 TNTYTTLI--GGH---CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 303
Query: 428 CNVL-----------------------------------DEMEENGCIPDI--------- 443
VL D M ENGC PDI
Sbjct: 304 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 363
Query: 444 --------------------------KTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+T+T +I G+C AL F +M++ AD
Sbjct: 364 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 423
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ LI+G + R+ A L M++K RL P + T TL + + A+++L
Sbjct: 424 SITYGALISGLCKESRLEEAKALYEGMLDK-RLVPCEVTRVTLTFEYCRREKTSIAVSVL 482
Query: 538 RLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRH 596
+ K+ + V+ +S G V+ AS FLK + ++Y A Y S + R+
Sbjct: 483 DRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRY 542
Query: 597 YEAKDL 602
A ++
Sbjct: 543 ALASEM 548
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G SL + + R+L + GRF + + + M G P+ + Y+ I GLCK + A
Sbjct: 103 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQA 162
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYDADADLLDVLIN 486
+VL+EM G P++ T T LI G C +RA F K+++ +Y + V+I
Sbjct: 163 FHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIG 222
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G+ + ++ A LLV M+E+ L+P T+ TLI + A L+ MK++ +
Sbjct: 223 GYCREGKLARAEMLLVRMVEQ-GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 281
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK 570
P + I F G +++A + L+
Sbjct: 282 PNIYTYNAVIDGFCKKGKIQEAYKVLR 308
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 372 SKSVYDGIHRA---------------LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ V+DG+ RA + G+ +E + ++ AM GF DN T + V+
Sbjct: 57 ARKVFDGMTRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 116
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LC+ GRF+D M E G P++ +T I G C V +A +M+ +
Sbjct: 117 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 176
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ LI+G A++L +++I+ +P T+ +I +L A L
Sbjct: 177 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 236
Query: 537 LRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFN 592
L M +Q P + I K G+ + A E + + + + P+ Y V + F
Sbjct: 237 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 296
Query: 593 EGRHYEAKDLL 603
+G+ EA +L
Sbjct: 297 KGKIQEAYKVL 307
>gi|255556157|ref|XP_002519113.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541776|gb|EEF43324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 486
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 108/214 (50%), Gaps = 6/214 (2%)
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
++E + N S SV + +GR E EK+ + M+ G + D + Y+ VI G CK G
Sbjct: 267 RFECVPNGFSYSV---LMTVFLDVGRTKEIEKLWEEMRAKGIKGDVVAYNTVIGGFCKIG 323
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
E A + EME NG + T+ LI G+C+ +VD A+L F M+ K + A+ ++D
Sbjct: 324 EIEKAEELSREMELNGVEANCVTFEHLINGYCSVGDVDSAILVFKHMVRKGFRAEGSVMD 383
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
VLI G ++RV+ A +++ + R +++ LI+ L +++EA+ L M
Sbjct: 384 VLIGGLCEKRRVSEALEIMRIAMRNDGFRLSGKSYELLIKGLCKDGKMDEALKLQAEMVG 443
Query: 543 QNYPPFPEPFVQYIS---KFGTVEDASEFLKALS 573
+ P E + +I K G E A+ K +S
Sbjct: 444 GGFEPNFEIYGAFIDGYMKLGNEEMAAMLRKEMS 477
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 3/175 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + + YN ++ + + + EM+ G E + T+ + + ++ A
Sbjct: 304 GIKGDVVAYNTVIGGFCKIGEIEKAEELSREMELNGVEANCVTFEHLINGYCSVGDVDSA 363
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGI 379
+ +F+ M+ ++ +L+ + L + R+A + + G LS Y+ +
Sbjct: 364 ILVFKHMVRKGFRAEGSVMDVLIGGLCEKRRVSEALEIMRIAMRND--GFRLSGKSYELL 421
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ L K G+ DEA K+ M GFEP+ Y I G K G E A + EM
Sbjct: 422 IKGLCKDGKMDEALKLQAEMVGGGFEPNFEIYGAFIDGYMKLGNEEMAAMLRKEM 476
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + +TYN ++ V ++ + M G ++ Y + F K +M+++A+
Sbjct: 303 KPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAIN 362
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLSKSVYDGI 379
LFE M P+V S L+ + LG +F ++ ++ G + Y I
Sbjct: 363 LFEEMRCRKIIPNVVTYSSLIDGLCK-----LGRIFYALKLVDEMHDRGQPPNIVTYSSI 417
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K D+A ++ +K+ G PD TY+ +I GLC++GR EDA NV +++ G
Sbjct: 418 LDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGY 477
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D+ +T++IQG C D+AL +KM + +A +++I + + A K
Sbjct: 478 NLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEK 537
Query: 500 LLVEMIEK 507
LL EMI +
Sbjct: 538 LLREMIVR 545
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/342 (20%), Positives = 156/342 (45%), Gaps = 7/342 (2%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
T +N IL L + + ++ ++M+ G E D T+ + F + + + +F
Sbjct: 61 TFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFA 120
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
++ Y P+ + L++ + + L F +K + G L + Y + L K
Sbjct: 121 KILKKGYHPTAITFNTLIKGLCLKGHIHQALHFH--DKVVAQGFHLDQVSYGTLINGLCK 178
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
+GR A +++K + +P+ + Y+ +I +CKA DA ++ +M PD+ T
Sbjct: 179 VGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFT 238
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ LI G A ++++ A+ F KM ++N + + ++L++GF + +VN A K+++ ++
Sbjct: 239 YNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDA-KVVLAIM 297
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
K ++P T+ +L++ ++ +A ++ M + + ++ F ++
Sbjct: 298 MKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMV 357
Query: 566 SE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
E F + K P+ Y + + GR + A L+
Sbjct: 358 DEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLV 399
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 163/384 (42%), Gaps = 42/384 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYIKISR---- 309
GY IT+N +++ L + + +++ +G+ +D I+ K+ R
Sbjct: 126 GYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAA 185
Query: 310 ------------------------QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
K +++ DA L+ M+ P V + L+
Sbjct: 186 LQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISG 245
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
S+++ L + NK + + + ++ + K G+ ++A+ ++ M +
Sbjct: 246 FSAVSK--LNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIK 303
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ ++ G C + A ++ D M G I +++ +T ++ G C VD A+
Sbjct: 304 PDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINL 363
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F +M + + LI+G R+ A KL+ EM ++ + P T+ ++++ L
Sbjct: 364 FEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQ-PPNIVTYSSILDALC 422
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSA- 581
+++A+ LL +K Q P + ++ + + G +EDA + L VK Y
Sbjct: 423 KNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVY 482
Query: 582 AYLQVFESFFNEGRHYEAKDLLYK 605
AY + + F ++G +A LL K
Sbjct: 483 AYTVMIQGFCDKGFFDKALALLSK 506
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 126/287 (43%), Gaps = 11/287 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TYN ++ + + ++ +MKKE ++ T+ + F K + DA +
Sbjct: 235 DVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVL 294
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHR 381
MM KP V + L+ SIN V + + ++S+ G + +Y +
Sbjct: 295 AIMMKDDIKPDVVTYNSLMDGYCSINK-----VNKAKDIFDSMASGGVIANVQIYTTMVN 349
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K+ DEA + + M+ P+ +TYS +I GLCK GR A ++DEM + G P
Sbjct: 350 GFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPP 409
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+I T++ ++ C + VD+A+ + ++ D +LI G R+ A +
Sbjct: 410 NIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVF 469
Query: 502 VEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+++ K L + T +I+ ++A+ LL M+ P
Sbjct: 470 EDLLVKGYNLDVYAYT--VMIQGFCDKGFFDKALALLSKMEDNGCIP 514
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 8/177 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ ++ L + + +V+EM G +I TY I K ++ A+ L
Sbjct: 375 NVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALL 434
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHR 381
+ D +P + ++L++ + G + N +E L G +L Y + +
Sbjct: 435 TNLKDQGIRPDMYTYTILIKGLCQS-----GRLEDAQNVFEDLLVKGYNLDVYAYTVMIQ 489
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
G FD+A ++ M++ G P+ TY VI L + + A +L EM G
Sbjct: 490 GFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRG 546
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P +++++ L KA A ++ +ME NG D T+ ILI +
Sbjct: 59 PPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSI 118
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIE 522
FAK+++K Y A + LI G + ++ A + +KV + + Q ++ TLI
Sbjct: 119 FAKILKKGYHPTAITFNTLIKGLCLKGHIHQA----LHFHDKVVAQGFHLDQVSYGTLIN 174
Query: 523 KLLGARRLEEAMNLLR 538
L R+ A+ LL+
Sbjct: 175 GLCKVGRITAALQLLK 190
>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
Length = 671
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 172/426 (40%), Gaps = 82/426 (19%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FFR + E +G N + Y + L + V+ ++V+EEM G + ++ T+ +
Sbjct: 238 FFRRMLE-TGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGL 296
Query: 312 QKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESL 367
K E A +LF + + YKP+V ++++ + ++ LV V +
Sbjct: 297 CKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPN 356
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
N+ + + G H K G FD A ++M MK GF P+ TY+ VI G CK G+ ++A
Sbjct: 357 TNTYTTLI--GGH---CKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEA 411
Query: 428 CNVL-----------------------------------DEMEENGCIPDI--------- 443
VL D M ENGC PDI
Sbjct: 412 YKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLIST 471
Query: 444 --------------------------KTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+T+T +I G+C AL F +M++ AD
Sbjct: 472 YCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFAD 531
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ LI+G + R+ A L M++K RL P + T TL + + A+++L
Sbjct: 532 SITYGALISGLCKESRLEEAKALYEGMLDK-RLVPCEVTRVTLTFEYCRREKTSIAVSVL 590
Query: 538 RLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRH 596
+ K+ + V+ +S G V+ AS FLK + ++Y A Y S + R+
Sbjct: 591 DRLDKRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRY 650
Query: 597 YEAKDL 602
A ++
Sbjct: 651 ALASEM 656
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 5/207 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G SL + + R+L + GRF + + + M G P+ + Y+ I GLCK + A
Sbjct: 211 GFSLDNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQA 270
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYDADADLLDVLIN 486
+VL+EM G P++ T T LI G C +RA F K+++ +Y + V+I
Sbjct: 271 FHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIG 330
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G+ + ++ A LLV M+E+ L+P T+ TLI + A L+ MK++ +
Sbjct: 331 GYCREGKLARAEMLLVRMVEQ-GLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFL 389
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK 570
P + I F G +++A + L+
Sbjct: 390 PNIYTYNAVIDGFCKKGKIQEAYKVLR 416
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 19/251 (7%)
Query: 372 SKSVYDGIHRA---------------LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
++ V+DG+ RA + G+ +E + ++ AM GF DN T + V+
Sbjct: 165 ARKVFDGMTRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVR 224
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
LC+ GRF+D M E G P++ +T I G C V +A +M+ +
Sbjct: 225 SLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKP 284
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ LI+G A++L +++I+ +P T+ +I +L A L
Sbjct: 285 NVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEML 344
Query: 537 LRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFN 592
L M +Q P + I K G+ + A E + + + + P+ Y V + F
Sbjct: 345 LVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCK 404
Query: 593 EGRHYEAKDLL 603
+G+ EA +L
Sbjct: 405 KGKIQEAYKVL 415
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 184/438 (42%), Gaps = 60/438 (13%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE +K+++ V ++L E+ + + FF+W G+ ++H+ TY ++R
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSIL-EIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIR 134
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS--------RQFQKFRMMEDAVKLFEF 326
L + + ++E+ + +TY+ +S + + +M+ A+ +F
Sbjct: 135 CLEEARLYGEMYRTIQEVVR-------NTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 327 MMDGPYKPSVQDC-SLLLRSISSINNPDLGLVF-RVANKYESLGNSLSKSVYDGIHRALT 384
KP+ S++L + + + V+ + N+ + ++++ Y + +
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT---YSALISSYE 244
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KLGR D A ++ MK+ +P Y+ ++ K G+ E A ++ +EM+ GC P +
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY 304
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI+G A VD A + M+ D L+ L+N RV + EM
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Query: 505 --------------------------------IEKVR---LRPWQATFKTLIEKLLGARR 529
+K++ + P + T+ LI+ R
Sbjct: 365 GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVK-EYPSSAAYLQ 585
+E+A+ LL M ++ +PP P + I+ G E A+E K L SS Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV 484
Query: 586 VFESFFNEGRHYEAKDLL 603
+ + F G+ EA DL
Sbjct: 485 MIKHFGKCGKLSEAVDLF 502
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 160/398 (40%), Gaps = 50/398 (12%)
Query: 237 TVLKELRIYPVKALG-----------FFRWVGEHSGYKHNTITYNGILRVL---ARHESV 282
VL EL VKALG F++ G K + TYN ++ +L +HE V
Sbjct: 163 AVLSEL----VKALGRAKMVSKALSVFYQAKGRKC--KPTSSTYNSVILMLMQEGQHEKV 216
Query: 283 RDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+ + EM EG D TY + ++K + A++LF+ M D +P+ + +
Sbjct: 217 HEVYT---EMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTT 273
Query: 342 LLRSISSINNPDLGLVFRVANKYESL---------GNSLSKSVYDGIHRALTKLGRFDEA 392
LL G+ F+V ++L G S + Y + + L K GR DEA
Sbjct: 274 LL-----------GIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEA 322
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
K M G PD + + ++ L K GR E+ NV EM C P + ++ +I+
Sbjct: 323 YGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA 382
Query: 453 HCAAN-EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+ V F KM + +LI+G+ RV A LL EM EK
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEK-GFP 441
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE---- 567
P A + +LI L A+R E A L + +K+ + I FG SE
Sbjct: 442 PCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDL 501
Query: 568 FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F + + P AY + G EA LL K
Sbjct: 502 FNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRK 539
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 103/445 (23%), Positives = 187/445 (42%), Gaps = 61/445 (13%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN---LVNKDSLKQFWV 150
T+ SV+ +L + + EK + +C++ P + YS ++ + L DS + +
Sbjct: 199 TYNSVILMLMQ-EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF- 256
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
MK++ E+ Y ++LG+ K K AL+ F + +K T +++
Sbjct: 257 --DEMKDNCMQPTEKIYTTLLGIYFKVGKVEK--ALDLFEE--MKRAGCSPTVYTYTELI 310
Query: 211 LGSDWDDKIGKKLEDMKIELSD---------NFVLTVLKEL-RIYPV----KALGFFRWV 256
G ++ + K L D N ++ +L ++ R+ + +G +R
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 257 GEHSGYKHNTITYNGILRVLARHES-VRDFWNVVEEMKKEG-------YEMDIDTYIKIS 308
++YN +++ L ++ V + + ++MK + Y + ID Y K +
Sbjct: 371 -------PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTN 423
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSISSINNPDLGLVFRVANKY--- 364
R +E A+ L E M + + P CSL IN + AN+
Sbjct: 424 R-------VEKALLLLEEMDEKGFPPCPAAYCSL-------INALGKAKRYEAANELFKE 469
Query: 365 --ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
E+ GN +S VY + + K G+ EA + MKN G PD Y+ ++ G+ KAG
Sbjct: 470 LKENFGN-VSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAG 528
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A ++L +MEENGC DI + I++ G RA+ F + D +
Sbjct: 529 MINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYN 588
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEK 507
L+ F A +++ EM +K
Sbjct: 589 TLLGCFAHAGMFEEAARMMREMKDK 613
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 208/510 (40%), Gaps = 60/510 (11%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V +L ++D + FF W ++ F+ + Y ++R
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSIL-EIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIR 134
Query: 138 NLVNKDSLKQFWVTLRR-MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
L + + T++ ++ + + ++ L +AK S AL+ F+ ++
Sbjct: 135 CLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSK--ALSVFYQAKGRK 192
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ V ++L + +K+ ++ E+ + E +P
Sbjct: 193 CKPTSSTYNSVILMLMQEGQH---EKVHEVYTEMCN--------EGDCFP---------- 231
Query: 257 GEHSGYKHNTITYNGILRV---LARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+TITY+ ++ L R++S +R F +EMK + Y + +
Sbjct: 232 --------DTITYSALISSYEKLGRNDSAIRLF----DEMKDNCMQPTEKIYTTLLGIYF 279
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLG 368
K +E A+ LFE M P+V + L++ LG RV Y + L
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG--------LGKAGRVDEAYGFYKDMLR 331
Query: 369 NSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-GRFE 425
+ L+ V + + L K+GR +E + M P ++Y+ VI L ++
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+ + D+M+ + P T++ILI G+C N V++ALL +M EK + LI
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
N KR A +L E+ E + +I+ +L EA++L MK Q
Sbjct: 452 NALGKAKRYEAANELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKAL 572
P + +S K G + +A+ L+ +
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G+ Y ++ L + + + +E+K+ + Y + + F K +
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKS 374
+AV LF M + P V + L+ + IN + + K E G +
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN-----SLLRKMEENGCRADIN 550
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ I + G A +M + +K++G +PD +TY+ ++ AG FE+A ++ EM
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 435 EENGCIPDIKTWTILI 450
++ G D T++ ++
Sbjct: 611 KDKGFEYDAITYSSIL 626
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 155/388 (39%), Gaps = 31/388 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A ++V G + + +L H+S F ++ GY D ++
Sbjct: 121 EAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL 180
Query: 308 SRQ----------------FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS--- 348
R+ K + A +E ++D Y P V ++L+ +
Sbjct: 181 VRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK 240
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
IN L L + + G + ++ + K G D+ ++ + M PD
Sbjct: 241 INEAQL-LFGEIGKR----GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDV 295
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TYS +I GLCK G+ +DA + EM + G +P+ T+T LI GHC D + + +
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K D + LING + A KL++EM ++ L+P + T+ LI+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEG 414
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYL 584
LE A+ + + M K+ F IS F G V +A L+ L P A Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 585 QVFESFFNEGRHYEAKDLL--YKCPHHI 610
V F +G LL +C H+
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHV 502
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 4/289 (1%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F +G+ G + +++N ++ + ++ + + M + D+ TY +
Sbjct: 247 LFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGL 305
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ++DA KLF M D P+ + L+ DLG+ + + G
Sbjct: 306 CKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM--EIYQQMLRKGVKP 363
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L K+G EA+K++ M G +PD TY+ +I G CK G E A +
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM + G D +T LI G C +V A +M+E D ++I+GF +
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
V +KLL EM + P T+ L+ L +++ A LL M
Sbjct: 484 GDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 2/209 (0%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ ++M ++G + D+ TY + K + +A KL M KP ++L+
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
DL + + G L + + + G+ EAE+ ++ M AG +PD
Sbjct: 412 K--EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ TY+ VI G CK G + +L EM+ +G +P + T+ +L+ G C ++ A +
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNG 496
M+ D ++L+ L + G
Sbjct: 530 AMLNLGVVPDDITYNILLERTLQAWKQGG 558
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 165/375 (44%), Gaps = 10/375 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + +L + + D +V++M + GY D T+ + +A
Sbjct: 112 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 171
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P++ +++ + + DL L + NK E+ +++ I
Sbjct: 172 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL--NLLNKMEAAKIEADVVIFNTII 229
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + K M+ G P+ +TYS +I LC GR+ DA +L +M E
Sbjct: 230 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 289
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI + A + M++++ D D + L+NGF R++ A ++
Sbjct: 290 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 349
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
M+ K P T+ TLI+ ++R+E+ L R M + + I
Sbjct: 350 FEFMVSK-DCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 560 --GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL-YKCPHHIRQDSK 615
G ++A + K + P Y + + N G+ +A ++ Y I+ D
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468
Query: 616 I--SLLFGSAKSNKV 628
I +++ G K+ KV
Sbjct: 469 IYTTMIEGMCKAGKV 483
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 136/290 (46%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ LF M+ PS+ + + LL +I+ + D+ V + K + L Y
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDV--VISLGEKMQRLEIVHGLYTY 85
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + + A ++ M G+EP +T S ++ G C R DA ++D+M E
Sbjct: 86 NILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 145
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ + V++NG + +
Sbjct: 146 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M E ++ F T+I+ L R +++A+NL + M+ + P + I
Sbjct: 206 ALNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 264
Query: 557 S---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS+ L + K+ P+ + + ++F EG+ EA+ L
Sbjct: 265 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 314
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ + + + ++M K + DI TY + F ++ A ++F
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G +FR + +G++++ Y + + L
Sbjct: 351 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGL 407
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G D A+K+ K M + G PD +TYS ++ GLC G+ E A V D M+++ DI
Sbjct: 408 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 467
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T +I+G C A +VD F + K + + +I+G S++ + AY LL +
Sbjct: 468 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 527
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E L P T+ TLI L + L+R M+
Sbjct: 528 MKEDGPL-PNSGTYNTLIRAHLRDGDKAASAELIREMR 564
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 148/337 (43%), Gaps = 11/337 (3%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
H TYN ++ R + ++ +M K GYE I T + + + + DAV L
Sbjct: 80 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 139
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ M++ Y+P + L+ + N + LV R+ + G + Y +
Sbjct: 140 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGVVVN 195
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L K G D A ++ M+ A E D + ++ +I LCK +DA N+ EME G P
Sbjct: 196 GLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRP 255
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
++ T++ LI C+ A + M+EK + + + LI+ F+ + + A KL
Sbjct: 256 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 315
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
+MI++ + P T+ +L+ RL++A + M ++ P + I F
Sbjct: 316 DDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 374
Query: 562 ---VEDASEFLKALSVKEYPS-SAAYLQVFESFFNEG 594
VED +E + +S + + Y + + F++G
Sbjct: 375 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 109/491 (22%), Positives = 208/491 (42%), Gaps = 31/491 (6%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + PS S +L + + + +M E + T+ +++ L KAS
Sbjct: 110 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 169
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLG------SDWDDKIGKKLEDMKIELSDNFV 235
+ AL D MV+ N+ V VV G +D + K+E KIE
Sbjct: 170 EAVAL---VDRMVQRGCQPNLVTYGV-VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIF 225
Query: 236 LTVLKELRIY--PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
T++ L Y AL F+ + E G + N +TY+ ++ L + D ++ +M
Sbjct: 226 NTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
++ ++ T+ + F K +A KL++ M+ P + + L+ + D
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLD 344
Query: 354 LGLVFRVANKYESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ +E + +SK Y+ + + K R ++ ++ + M + G D
Sbjct: 345 -----KAKQMFEFM---VSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGD 396
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY+ +I GL G ++A V +M +G PDI T++IL+ G C ++++AL F
Sbjct: 397 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 456
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M + D + +I G +V+ + L + K ++P T+ T+I L
Sbjct: 457 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK-GVKPNVVTYNTMISGLCSK 515
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYL 584
R L+EA LL+ MK+ P + I + G ++E ++ + + A+ +
Sbjct: 516 RLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 575
Query: 585 QVFESFFNEGR 595
+ + ++GR
Sbjct: 576 GLVANMLHDGR 586
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 178/413 (43%), Gaps = 25/413 (6%)
Query: 237 TVLKELRI--YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV---RDFWNVVEE 291
TVL+ LR+ P L FF WV + G+ H ++ +L L R ++ R+F +E
Sbjct: 70 TVLQTLRLIKVPADGLRFFDWVS-NKGFSHKEQSFFLMLEFLGRARNLNVARNFLFSIER 128
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
++ + + R + + +++VKLF+ M PSV + LL + +
Sbjct: 129 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL--LKR 186
Query: 352 PDLGLVFRVANKY-ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ + ++ + G + ++ + K DEA ++ K M+ PD +T
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 411 YSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
Y+ +I GLC+AG+ + A NVL M + P++ ++T L++G+C E+D A+L F
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGA 527
M+ + +A + LI G R + +L+ + P TF LI+ A
Sbjct: 307 MLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDA 366
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY------- 577
L+ AM + + M P + ++ + + A L KE
Sbjct: 367 GHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDEC 426
Query: 578 -PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--SKISLLFGSAKSNK 627
P +AAY +FE G+ +A+ + + QD S +L+ G + K
Sbjct: 427 KPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGK 479
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 155/388 (39%), Gaps = 56/388 (14%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFRMMEDAVK 322
+ +TYN I+ L R V+ NV+ M K+ ++ ++ +Y + R + + +++AV
Sbjct: 243 DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVL 302
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+F M+ KP+ Y+ + +
Sbjct: 303 VFHDMLSRGLKPNA-------------------------------------VTYNTLIKG 325
Query: 383 LTKLGRFDEAEKMMKAMKNA--GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L++ R+DE + ++ +A F PD T++ +I C AG + A V EM
Sbjct: 326 LSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLH 385
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD---LLDVLINGFLSQKRVNGA 497
PD ++++LI+ C NE DRA F ++ EK D L N NG
Sbjct: 386 PDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGK 445
Query: 498 YKLLVEMIEKVRLRPWQ--ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
K ++ ++ R Q ++KTLI + + A LL LM ++ + P E +
Sbjct: 446 TKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELL 505
Query: 553 VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL-YKCPHHI 610
+ + K G A + L+ + Y P + + V E+ L+ I
Sbjct: 506 IDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRI 565
Query: 611 RQDSKIS-----LLFGSAKSNKVTIPSR 633
RQ+ +S LLF SA+ K + R
Sbjct: 566 RQNIDLSTQVVRLLFSSAQKEKAFLIVR 593
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 6/315 (1%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
T ++ IL L +++ ++ ++ + G ++ T + F + A +F
Sbjct: 93 TFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFA 152
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
++ Y P + L++ + L F +K + G L + Y + L K
Sbjct: 153 NILKRGYHPDAITLNTLIKGLCFCGEIKRALYFH--DKVVAQGFQLDQVSYGTLINGLCK 210
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G ++++ ++ +PD + Y+ +I LCK R DAC++ EM G P++ T
Sbjct: 211 AGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFT 270
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ LI G C + A +M KN + D ++LI+ + +++ A L EM
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTV 562
K + P T+ +LI+ L LE A+ L + MK+Q P + + + K G +
Sbjct: 331 HK-NMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRL 389
Query: 563 EDASEFLKALSVKEY 577
E+A +F + L VK Y
Sbjct: 390 ENAKQFFQHLLVKGY 404
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 3/280 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + ++Y ++ L + + ++ +++ + D+ Y I K + + DA
Sbjct: 193 GFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDA 252
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+ M+ P+V + L+ + N L F + N+ + + ++ +
Sbjct: 253 CDLYSEMIVKGISPNVFTYNTLIYGFCIMGN--LKEAFSLLNEMKLKNINPDVYTFNILI 310
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K G+ DEA + + MK+ P+ +TY+ +I GLCK E A + +M+E G
Sbjct: 311 DALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 370
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ ++TIL+ C ++ A F ++ K Y + +V+ING L + + G
Sbjct: 371 PDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMING-LCKAGLFGDVMD 429
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L +E P TFKT+I L ++A LR M
Sbjct: 430 LKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREM 469
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 106/250 (42%), Gaps = 2/250 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y I+ L +++ V D ++ EM +G ++ TY + F +
Sbjct: 225 EGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNL 284
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L M P V ++L+ ++ D + K++++ ++ Y
Sbjct: 285 KEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIV--TYT 342
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K + A + K MK G +PD +Y+ ++ LCK GR E+A +
Sbjct: 343 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVK 402
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +++T+ ++I G C A + +KM K DA +I + + A
Sbjct: 403 GYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKA 462
Query: 498 YKLLVEMIEK 507
K L EMI +
Sbjct: 463 EKFLREMIAR 472
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 81/205 (39%), Gaps = 11/205 (5%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + ++ L K + ++ + + NG P++ T ILI C + A
Sbjct: 91 PPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSV 150
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIE 522
FA ++++ Y DA L+ LI G G K + +KV + + Q ++ TLI
Sbjct: 151 FANILKRGYHPDAITLNTLIKGLC----FCGEIKRALYFHDKVVAQGFQLDQVSYGTLIN 206
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-P 578
L A + LLR ++ + P + + K V DA + + VK P
Sbjct: 207 GLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISP 266
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLL 603
+ Y + F G EA LL
Sbjct: 267 NVFTYNTLIYGFCIMGNLKEAFSLL 291
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 8/174 (4%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N ++ L + + + ++ EEMK + +I TY + K +E A+ L + M
Sbjct: 305 TFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKM 364
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALT 384
+ +P V ++LL ++ G + ++ L G L+ Y+ + L
Sbjct: 365 KEQGIQPDVYSYTILLDALCK-----GGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLC 419
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
K G F + + M+ G PD IT+ +I L + + A L EM G
Sbjct: 420 KAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARG 473
>gi|302801820|ref|XP_002982666.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
gi|300149765|gb|EFJ16419.1| hypothetical protein SELMODRAFT_421954 [Selaginella moellendorffii]
Length = 796
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 160/361 (44%), Gaps = 6/361 (1%)
Query: 189 FHDGMVKEIAMDN--VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
F + EI + N + ++ VV W ++ ++L+ + I S+ + VLK ++ P
Sbjct: 57 FRPSKLGEIGLSNADLISKILYVVRRPYWSPEVERELQLLDIRPSEFHINEVLKNIQ-EP 115
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A GFF+W+ Y +T +++ +L R + + V+ ++K + M Y
Sbjct: 116 DVANGFFQWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNT 175
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + + K +++A ++ M D P + + L+ S + V V ++ +
Sbjct: 176 LIKVYGKAHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEK--VLEVYDEMQK 233
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G SL + Y+ + K+GR D A + + MK G +P+ + YS +I G K+GR E
Sbjct: 234 IGCSLDRVGYEVVVPHAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEI 293
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+EM P + T+ LI+ +C + ++ L F M NY + + L++
Sbjct: 294 GTKYFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVD 353
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
++ A + E + V L F LIE+ A + E A+ L R M+
Sbjct: 354 AHAKAGMLDAALE-FYERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLR 412
Query: 547 P 547
P
Sbjct: 413 P 413
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 119/564 (21%), Positives = 237/564 (42%), Gaps = 34/564 (6%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFF--HISSFTASNQSHTSQFHINTCQ 58
+ R + L+S L + + + +S+R ++ V F+ + SF + F +
Sbjct: 4 LRRPLSRLASCLLLQANAARQEASSRVIWAPVRFFYKEELPSFLLRADDDPAFFRPSKLG 63
Query: 59 KIFFSTSPNSS--LELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFF 116
+I S + S L ++ WS E+E +L+ L + + + VL+ + +P+ A+ FF
Sbjct: 64 EIGLSNADLISKILYVVRRPYWSPEVERELQLLDIRPSEFHINEVLKNI-QEPDVANGFF 122
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
W+ +K + PS+ +S++L + L +K D C + Y +++ V K
Sbjct: 123 QWIRRQKWYVPSTYSFSILLNTYGRGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGK 182
Query: 177 AKKASDL-AALNQFHDG-MVKEIAMDNVAKTLVDVVLGSD-----WDD--KIGKKLEDMK 227
A K + + D V +I N +L S+ +D+ KIG L+ +
Sbjct: 183 AHKLDEAWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVG 242
Query: 228 IELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
E+ V+ ++ + + F R E G++ N + Y+ ++ + +
Sbjct: 243 YEV----VVPHAGKVGRLDLACMLFERMKAE--GHQPNAVAYSALIAGQLKSGRLEIGTK 296
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
EEM+ + T+ + + K +E +K F+ M YKP++ + L+ + +
Sbjct: 297 YFEEMRSLEIRPLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHA 356
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
D L F + +G L ++ + + G+ + A ++ + M+ G P
Sbjct: 357 KAGMLDAALEF--YERMRGVGLWLPPLIFAVLIEQHAQAGKAETAVRLYREMRGVGLRPS 414
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGC-IPDIKTWTILIQGHCAANEVDRALLCF 466
+ T V+ + K G+++D +L EM+E G + D +I+ + A F
Sbjct: 415 HFTCRIVVGAVAKGGKYDDVERILFEMQEMGLNVADAVNDSIV--KLVDDKRISDAWELF 472
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA----TFKTLIE 522
K+ + L +++GFLS + A ++L M RP A T+ L+E
Sbjct: 473 LKVTGHGFTPHVSLCREILHGFLSCGDMEHARQMLSFM-----QRPGSAVDLRTYCMLLE 527
Query: 523 KLLGARRLEEAMNLLRLMKKQNYP 546
L RLE ++ M++ +P
Sbjct: 528 FFLRGSRLEHEEVIISFMRETKHP 551
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 104/240 (43%), Gaps = 6/240 (2%)
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
Y PS S+LL + D V RV ++ ++ Y+ + + K + DE
Sbjct: 131 YVPSTYSFSILLNTYG--RGKDFQAVQRVLADLKADKCPMTTVAYNTLIKVYGKAHKLDE 188
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A K M+++ PD T++ ++ AG+ E V DEM++ GC D + +++
Sbjct: 189 AWGYYKEMQDSRCVPDIFTFNTLMSLYSYAGQSEKVLEVYDEMQKIGCSLDRVGYEVVVP 248
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+D A + F +M + + +A LI G L R+ K EM + +R
Sbjct: 249 HAGKVGRLDLACMLFERMKAEGHQPNAVAYSALIAGQLKSGRLEIGTKYFEEM-RSLEIR 307
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEF 568
P TF +LIE + RLE + + M+ NY P V +K G ++ A EF
Sbjct: 308 PLLGTFASLIEAYCKSGRLETGLKFFKDMEAFNYKPNLCIYAALVDAHAKAGMLDAALEF 367
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 155/388 (39%), Gaps = 31/388 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A ++V G + + +L H+S F ++ GY D ++
Sbjct: 121 EAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRL 180
Query: 308 SRQ----------------FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS--- 348
R+ K + A +E ++D Y P V ++L+ +
Sbjct: 181 VRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDCGYPPDVCKFNVLMHRLCKEHK 240
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
IN L L + + G + ++ + K G D+ ++ + M PD
Sbjct: 241 INEAQL-LFGEIGKR----GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDV 295
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
TYS +I GLCK G+ +DA + EM + G +P+ T+T LI GHC D + + +
Sbjct: 296 FTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQ 355
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ K D + LING + A KL++EM ++ L+P + T+ LI+
Sbjct: 356 MLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQR-GLKPDKFTYTMLIDGCCKEG 414
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYL 584
LE A+ + + M K+ F IS F G V +A L+ L P A Y
Sbjct: 415 DLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYT 474
Query: 585 QVFESFFNEGRHYEAKDLL--YKCPHHI 610
V F +G LL +C H+
Sbjct: 475 MVIHGFCKKGDVKTGFKLLKEMQCDGHV 502
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 4/289 (1%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F +G+ G + +++N ++ + ++ + + M + D+ TY +
Sbjct: 247 LFGEIGKR-GLRPTVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGL 305
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K ++DA KLF M D P+ + L+ DLG+ + + G
Sbjct: 306 CKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGM--EIYQQMLRKGVKP 363
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + L K+G EA+K++ M G +PD TY+ +I G CK G E A +
Sbjct: 364 DVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIR 423
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM + G D +T LI G C +V A +M+E D ++I+GF +
Sbjct: 424 KEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
V +KLL EM + P T+ L+ L +++ A LL M
Sbjct: 484 GDVKTGFKLLKEMQCDGHV-PGVVTYNVLLNGLCKQGQMKNANMLLDAM 531
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 2/200 (1%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+ ++M ++G + D+ TY + K + +A KL M KP ++L+
Sbjct: 352 IYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCC 411
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
DL + + G L + + + G+ EAE+ ++ M AG +PD
Sbjct: 412 K--EGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPD 469
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ TY+ VI G CK G + +L EM+ +G +P + T+ +L+ G C ++ A +
Sbjct: 470 DATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLD 529
Query: 468 KMMEKNYDADADLLDVLING 487
M+ D ++L+ G
Sbjct: 530 AMLNLGVVPDDITYNILLEG 549
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + ITYN ++ L + +R+ +V EM + G + D TY + K +E A
Sbjct: 360 GVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESA 419
Query: 321 VKLF-EFMMDGPYKPSVQDCSLL---LRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+++ E + +G +V +L+ R I R + G + Y
Sbjct: 420 LEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE------RTLREMLEAGIKPDDATY 473
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K G K++K M+ G P +TY+ ++ GLCK G+ ++A +LD M
Sbjct: 474 TMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLN 533
Query: 437 NGCIPDIKTWTILIQGHC 454
G +PD T+ IL++GHC
Sbjct: 534 LGVVPDDITYNILLEGHC 551
>gi|224056475|ref|XP_002298874.1| predicted protein [Populus trichocarpa]
gi|222846132|gb|EEE83679.1| predicted protein [Populus trichocarpa]
Length = 948
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 158/392 (40%), Gaps = 43/392 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SGY +TYN IL + + ++++ M+ +G E D+ TY + K
Sbjct: 2 EGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRS 61
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
L + M P+ + L+ + + +G RV N+ L S ++ Y+
Sbjct: 62 AKGYLLLKKMRKRMIAPNEFTYNTLINGL--MKERKIGGATRVFNEMLMLNLSPNRVTYN 119
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ G F++A +++ M+ G PD + Y ++ GL K +F+ A ++++ + +
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMS 179
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G + + +T +I G C +D +L M + D VLINGF ++ A
Sbjct: 180 GMVVGYRAYTAMIDGLCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNA 239
Query: 498 YKLLVEMIEKVRLRPWQATFKTLI-----------------------------------E 522
+++ +M K L P + TLI
Sbjct: 240 KEVICKMF-KAGLAPNYVIYATLIYNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLIS 298
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA----SEFLKALSVKEYP 578
L A R+ EA + +R M + P F I+ +G + DA S F + + + P
Sbjct: 299 SLCRAGRVAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCP 358
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610
S Y + + G EAK LLYK HHI
Sbjct: 359 SHFTYGSLLKGLCKGGNLREAKKLLYKL-HHI 389
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 125/324 (38%), Gaps = 3/324 (0%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL FF N + Y + L + + EEM+ +G D
Sbjct: 447 VPALLFFEKALARGTLSPNKVMYTSLFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINA 506
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + + ME KLF M G PS+ ++LL S DL + N
Sbjct: 507 VLDGYSRMGKMEKVEKLFIKMQSGSLTPSLATYNILLHGYSK--KKDLLKCSKFYNIMTR 564
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G S K I L K G D KM+K M D +T + +I C+ +
Sbjct: 565 MGISPDKLTCHSIILGLCKSGMLDVGFKMLKKMIMEDTLVDQLTLNMLITNSCETDKMGK 624
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++L+ G IPD+ T+ + G A+ + + L M+E+ + LIN
Sbjct: 625 AFDLLNIKNLLGIIPDVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLIN 684
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + GA++L EM E + + W ++ L ++EEAM +L M ++
Sbjct: 685 GMCRMGDIQGAFRLKDEM-EAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLI 743
Query: 547 PFPEPFVQYISKFGTVEDASEFLK 570
P F + SE LK
Sbjct: 744 PTVATFTTLMHMLCKKAKLSEALK 767
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 79/149 (53%), Gaps = 1/149 (0%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M+ +G+ P +TY+ ++ CK GR++ A +++D ME G D+ T+ +LI C N
Sbjct: 1 MEGSGYVPTIVTYNTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNR 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ L KM ++ + + LING + ++++ GA ++ EM+ + L P + T+
Sbjct: 61 SAKGYLLLKKMRKRMIAPNEFTYNTLINGLMKERKIGGATRVFNEML-MLNLSPNRVTYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
LI+ E+A+ LL +M+ + P
Sbjct: 120 ILIDGHCDCGNFEQALRLLDVMEAKGLRP 148
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/436 (19%), Positives = 185/436 (42%), Gaps = 33/436 (7%)
Query: 113 SAFFNWVCDKKQFRPSS---------------TVYSLMLRNLVNKDSLKQFWVTLRRMKE 157
+ NW C K +++ +S Y++++ +L + + ++ L++M++
Sbjct: 14 NTILNWCCKKGRYKAASDLIDRMESKGIEADVCTYNMLIDDLCKNNRSAKGYLLLKKMRK 73
Query: 158 DHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWD 216
E TY +++ L K +K A F++ ++ ++ + V L+D
Sbjct: 74 RMIAPNEFTYNTLINGLMKERKIG--GATRVFNEMLMLNLSPNRVTYNILIDGHCDCGNF 131
Query: 217 DKIGKKLEDMKI------ELSDNFVLTVLKELRIYPVKA--LGFFRWVGEHSGYKHNTIT 268
++ + L+ M+ E++ +L+ L +L + + + R G GY+ T
Sbjct: 132 EQALRLLDVMEAKGLRPDEVNYGALLSGLSKLAKFDIAKSLMERIRMSGMVVGYRAYTAM 191
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+G L +H + + +++ M K+G DI T+ + F K +++A ++ M
Sbjct: 192 IDG----LCKHGLLDESLQLLDMMFKDGASPDIITFSVLINGFCKAGKIKNAKEVICKMF 247
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
P+ + L+ +S D+ FR G+ + + + + +L + GR
Sbjct: 248 KAGLAPNYVIYATLI--YNSCKKGDITEAFRNYATMTRTGHDVDYFICNVLISSLCRAGR 305
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
EAE M+ M P++IT+ +I G G A ++ DEM + G P T+
Sbjct: 306 VAEAEDFMRHMSTIDLAPNSITFDCIINGYGILGDALKAFSMFDEMIKLGHCPSHFTYGS 365
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L++G C + A K+ D ++ + +++ + +++ A L EM++
Sbjct: 366 LLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDAVALFGEMVQ-F 424
Query: 509 RLRPWQATFKTLIEKL 524
+ P T+ ++ L
Sbjct: 425 NVLPDSHTYAIILAGL 440
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 122/281 (43%), Gaps = 6/281 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + TY +L+ L + ++R+ ++ ++ +D + Y I + K + DA
Sbjct: 355 GHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSETCKRGKLSDA 414
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDG 378
V LF M+ P +++L +S P L L F A +L S +K +Y
Sbjct: 415 VALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPAL-LFFEKALARGTL--SPNKVMYTS 471
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K+G+ + A + + M++ G PD I + V+ G + G+ E + +M+
Sbjct: 472 LFDGLFKVGQSNAASYIYEEMEHKGINPDTIAINAVLDGYSRMGKMEKVEKLFIKMQSGS 531
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P + T+ IL+ G+ ++ + + M D +I G ++ +
Sbjct: 532 LTPSLATYNILLHGYSKKKDLLKCSKFYNIMTRMGISPDKLTCHSIILGLCKSGMLDVGF 591
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
K+L +MI + L Q T LI ++ +A +LL +
Sbjct: 592 KMLKKMIMEDTLVD-QLTLNMLITNSCETDKMGKAFDLLNI 631
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 1/157 (0%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + + Y + + ++G A ++ M+ G ++ S ++ GL + G+ E+A
Sbjct: 671 GITPTSTQYISLINGMCRMGDIQGAFRLKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEA 730
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VLD M + IP + T+T L+ C ++ AL KM D +VLI+G
Sbjct: 731 MLVLDCMLQKRLIPTVATFTTLMHMLCKKAKLSEALKLRGKMALYGVKLDVVAYNVLISG 790
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
+ A+ L EM E+ L P T+ TLI+ +
Sbjct: 791 LCADGDALAAFNLYEEMKER-GLWPNTTTYCTLIDAI 826
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 76/174 (43%), Gaps = 2/174 (1%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D++TY I + + ++ L M++ P+ L+ + + D+ FR
Sbjct: 640 DVNTYNAIFTGLNRASALRESHLLLHDMLERGITPTSTQYISLINGMCRMG--DIQGAFR 697
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ ++ E++G S + R L + G+ +EA ++ M P T++ ++ LC
Sbjct: 698 LKDEMEAIGVSSWDVAESAMVRGLAQCGKVEEAMLVLDCMLQKRLIPTVATFTTLMHMLC 757
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
K + +A + +M G D+ + +LI G CA + A + +M E+
Sbjct: 758 KKAKLSEALKLRGKMALYGVKLDVVAYNVLISGLCADGDALAAFNLYEEMKERG 811
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 2/191 (1%)
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
F + ++ LG+ S Y + + L K G EA+K++ + + D Y+ ++
Sbjct: 345 FSMFDEMIKLGHCPSHFTYGSLLKGLCKGGNLREAKKLLYKLHHIPAAVDTNIYNTILSE 404
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDA 476
CK G+ DA + EM + +PD T+ I++ G ++ ALL F K + +
Sbjct: 405 TCKRGKLSDAVALFGEMVQFNVLPDSHTYAIILAGLSRKGKMVPALLFFEKALARGTLSP 464
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ + L +G + N A + EM E + P +++ ++E+ L
Sbjct: 465 NKVMYTSLFDGLFKVGQSNAASYIYEEM-EHKGINPDTIAINAVLDGYSRMGKMEKVEKL 523
Query: 537 LRLMKKQNYPP 547
M+ + P
Sbjct: 524 FIKMQSGSLTP 534
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/441 (22%), Positives = 185/441 (41%), Gaps = 56/441 (12%)
Query: 111 KASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI 170
+A F+ +C +P+ ++ ++ L + + + L RM ED + TY +I
Sbjct: 68 EALDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTI 122
Query: 171 L-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+ G+ K S L L + + + I D V + ++ W D +++ IE
Sbjct: 123 VDGMCKMGDTVSALNLLRKMEE--LSHIKPDVV---IYSAIIDGLWKDGRHTDAQNLFIE 177
Query: 230 LSDNFVLTVLKELRIYPVKALGFF---RWVGEHSGYKH--------NTITYNGILRVLAR 278
+ D + ++ Y GF +W + + +T++G++ L +
Sbjct: 178 MQDK---GIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVK 234
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ ++++EM G ++ T + ++DA+++F+ M + S+ D
Sbjct: 235 EGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM-----QKSMMD 289
Query: 339 CSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ + + N PD+ Y+ + L G+F EAE++
Sbjct: 290 ----IDATHAFNGVEPDV-------------------QTYNILISGLINEGKFLEAEELY 326
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ M + G PD +TYS +I GLCK R ++A + D M P+I T+ LI G+C A
Sbjct: 327 EEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKA 386
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
VD L F +M + A+A LI GF +NG+ + EMI + P T
Sbjct: 387 GMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISS-GVYPDTIT 445
Query: 517 FKTLIEKLLGARRLEEAMNLL 537
+ ++ L L+ A+ +L
Sbjct: 446 IRNMLTGLWSKEELKRALAML 466
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 106/234 (45%), Gaps = 22/234 (9%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y I + K+G A +++ M+ + +PD + YS +I GL K GR DA N+ EM
Sbjct: 119 YGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEM 178
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++ G PDI T++ +I G C++ + A +M+ + D LIN + + +
Sbjct: 179 QDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDL 238
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
N A LL EMI + P T TL++ L + +L++A+ + + M+K +
Sbjct: 239 NSAQDLLQEMISS-GVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMD------ID 291
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
F VE P Y + NEG+ EA++L + PH
Sbjct: 292 ATHAFNGVE--------------PDVQTYNILISGLINEGKFLEAEELYEEMPH 331
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 100/232 (43%), Gaps = 14/232 (6%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF P +T++ ++ GLC R +A ++ +M C P++ T+T L+ G C V A
Sbjct: 45 GFHPTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEA 100
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
+ +M+E + +++G A LL +M E ++P + +I+
Sbjct: 101 VALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIID 160
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-P 578
L R +A NL M+ + P + I+ F G +A L+ + V++ P
Sbjct: 161 GLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISP 220
Query: 579 SSAAYLQVFESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAK 624
+ + + EG A+DLL + CP+ + ++ + L S K
Sbjct: 221 DVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGK 272
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 11/169 (6%)
Query: 440 IP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
IP DI ++ ILI+ C+ +++ AL F K+ + + + L++G + RV+ A
Sbjct: 11 IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL 70
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
L +M +P TF TL+ L R+ EA+ LL M + P + V
Sbjct: 71 DLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 125
Query: 556 ISKFGTVEDASEFLKALSVKEY--PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K G A L+ + + P Y + + + +GRH +A++L
Sbjct: 126 MCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNL 174
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 78/177 (44%), Gaps = 4/177 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + TYN ++ L + + EEM G D TY + K +++
Sbjct: 297 NGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDE 356
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A ++F+ M + P++ + L+ D GL +F + + N+++ Y
Sbjct: 357 ATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAIT---YIT 413
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ R K+G + + + + M ++G PD IT ++ GL + A +L+E++
Sbjct: 414 LIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T+ Y ++ + +R EM D+ TY I F + M +A
Sbjct: 789 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 848
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M +P + L+ + + FRV N G S + Y +
Sbjct: 849 GKLFHEMFCKGLEPDSVTFTELINGYCKAGH--MKDAFRVHNHMIQAGCSPNVVTYTTLI 906
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G D A +++ M G +P+ TY+ ++ GLCK+G E+A ++ E E G
Sbjct: 907 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 966
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D T+T L+ +C + E+D+A +M+ K +VL+NGF + KL
Sbjct: 967 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 1026
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L M+ K + P TF +L+++ L+ A + + M + P
Sbjct: 1027 LNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 1072
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 173/423 (40%), Gaps = 40/423 (9%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
S N LT L + A+ FR E G N +YN ++ + + +++ +++
Sbjct: 655 SCNVYLTRLSKDCYKTATAIIVFREFPE-VGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 713
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M+ +GY D+ +Y + + +F ++ KL E M KP+ ++ + I
Sbjct: 714 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 773
Query: 351 N-----------------PDLGLV------------FRVANK--YESLGNSLSKSV--YD 377
PD + R A+K YE ++ V Y
Sbjct: 774 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 833
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I ++G EA K+ M G EPD++T++++I G CKAG +DA V + M +
Sbjct: 834 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 893
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P++ T+T LI G C ++D A +M + + + ++NG + A
Sbjct: 894 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 953
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
KL+ E E L T+ TL++ + +++A +L+ M + P F ++
Sbjct: 954 VKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Query: 558 KF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK--CPHHIRQ 612
F G +ED + L + K +A + + +A +YK C +
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 1072
Query: 613 DSK 615
D K
Sbjct: 1073 DGK 1075
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 10/298 (3%)
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSL 371
F ++ +A ++FE M++ SV C++ L +S +VFR ++ +G
Sbjct: 631 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR---EFPEVGVCW 687
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + Y+ + + +LGR EA ++ M+ G+ PD I+YS V+ G C+ G + ++
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+ M+ G P+ + +I C ++ A F++M+ + D + LI+GF +
Sbjct: 748 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 807
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A K EM + + P T+ +I + EA L M + P
Sbjct: 808 GDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 552 FVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F + I+ K G ++DA + P+ Y + + EG A +LL++
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 924
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G N +TY ++ L + + ++ EM K G + +I TY I K +E
Sbjct: 892 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 951
Query: 319 DAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
+AVKL EF G +V +L+ S + + E LG L ++
Sbjct: 952 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK-----EMLGKGLQPTIVT 1006
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + G ++ EK++ M G P+ T++ ++ C + A + +M
Sbjct: 1007 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 1066
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD KT+ L++GHC A + A F +M K + VLI GFL +K+
Sbjct: 1067 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 1126
Query: 496 GAYKLLVEM 504
A ++ +M
Sbjct: 1127 EAREVFDQM 1135
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 2/246 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN I+ L + ++ + +V E + G D TY + + K M+ A
Sbjct: 929 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 988
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ + M+ +P++ ++L+ + G ++ N + G + + + ++ +
Sbjct: 989 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE--KLLNWMLAKGIAPNATTFNSLV 1046
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ A + K M + G PD TY ++ G CKA ++A + EM+ G
Sbjct: 1047 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 1106
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+++LI+G + A F +M + AD ++ D + KR +
Sbjct: 1107 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 1166
Query: 501 LVEMIE 506
+ E+IE
Sbjct: 1167 IDEIIE 1172
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 165/378 (43%), Gaps = 35/378 (9%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
+ + + D++ W K L ++ + +LK+L+ P ALGFF W+ G
Sbjct: 314 IVEVVSDILRQLRWGPTAEKALYNLNFSMDAYQANQILKQLQD-PSVALGFFDWLRRQPG 372
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
++H+ TY ++ +L R ++E+M K+G + ++ TY ++ + +++A+
Sbjct: 373 FRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEAL 432
Query: 322 KLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLGLVFRVANK--------YESLGNSL 371
+F M + +P V C+L+ + + + + + + R+ Y + N L
Sbjct: 433 NVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCL 492
Query: 372 SKS----------------------VYDGIHRALTKLGR-FDEAEKMMKAMKNAGFEPDN 408
K+ V I AL R ++ A K+ M+NAGF+PD
Sbjct: 493 GKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDK 552
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TYS V+ L G E+A +V EM++ +PD + +L+ A V++A +
Sbjct: 553 VTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQA 612
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ + + L++ FL R+ AY L+ M+ + LRP T+ L+ A+
Sbjct: 613 MLNAGLLPNVPTCNSLLSAFLRLHRLPDAYNLVQSMV-ALGLRPSLQTYTLLLSCCTEAQ 671
Query: 529 RLEEAMNLLRLMKKQNYP 546
+ LM +P
Sbjct: 672 PAHDMGFFCELMAVTGHP 689
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 39/228 (17%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + RFD K+++ M G +P+ +TY+++I A ++A NV +EM+E GC PD
Sbjct: 387 LGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPD 446
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M E D V+IN + A+ L
Sbjct: 447 RVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFC 506
Query: 503 EMIE------------------KVR----------------LRPWQATFKTLIEKLLGAR 528
EM+E K R +P + T+ ++E L
Sbjct: 507 EMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCG 566
Query: 529 RLEEAMNLLRLMKKQNYPPFPEP----FVQYISKFGTVEDASEFLKAL 572
LEEA ++ M+++N+ P EP V K G VE ASE+ +A+
Sbjct: 567 YLEEAESVFVEMQQKNWVP-DEPVYGLLVDLWGKAGNVEKASEWYQAM 613
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 161/419 (38%), Gaps = 53/419 (12%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W E L L+ + +L++L DP A FF+W+ + FR Y+ M+
Sbjct: 327 WGPTAEKALYNLNFSMDAYQANQILKQLQ-DPSVALGFFDWLRRQPGFRHDGHTYTTMVG 385
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L +M +D C TY ++ A + ALN F++
Sbjct: 386 ILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKE--ALNVFNEMQEVGC 443
Query: 198 AMDNVAK-TLVDVVLGSDWDD---KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
D V TL+D+ + + D + K++++ + D F +V+ + L
Sbjct: 444 EPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLS-PDTFTYSVIINC-LGKAGNLAAA 501
Query: 254 RWV----GEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
W+ EH G N +TYN ++ + A+ + + +M+ G++ D TY +
Sbjct: 502 HWLFCEMVEH-GCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVME 560
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
+E+A +F M + P + P GL+ +
Sbjct: 561 ALGHCGYLEEAESVFVEMQQKNWVP---------------DEPVYGLLVDL--------- 596
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
K G ++A + +AM NAG P+ T + ++ + R DA N
Sbjct: 597 -------------WGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRLPDAYN 643
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME-KNYDADADLLDVLING 487
++ M G P ++T+T+L+ C + + F ++M + A A LL + G
Sbjct: 644 LVQSMVALGLRPSLQTYTLLLSC-CTEAQPAHDMGFFCELMAVTGHPAHAFLLSMPAAG 701
>gi|413938637|gb|AFW73188.1| hypothetical protein ZEAMMB73_055137 [Zea mays]
Length = 1115
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 182/435 (41%), Gaps = 20/435 (4%)
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGS--DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
+ DG V+EI +L S DW + LE + S + V +LK +
Sbjct: 694 YSDGDVEEICQ----------ILSSSDDWGS-TQQALETRSVHFSPSLVDAILKRCKRNS 742
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
AL FF WV Y +T TYN +++ + + W + EM + G +DT+
Sbjct: 743 CAALQFFSWVCRRPYYMPSTKTYNTAMKLAGSAKDFKHMWYLYREMLRTGCSPTVDTWNV 802
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ Q+ + E A+ F M + P + L+ ++ I + + + +
Sbjct: 803 MVCQYGNAGLSEKALNTFWDMKKCGFLPDKTTYNHLIMYLTHIKGRKIDVAVTIFQEMCH 862
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G+ K + AL + + ++A + ++ GF + YS + LC+A R E+
Sbjct: 863 AGHIPDKRILFMYLLALCECRKIEDATSSVVSLCELGFSVQAV-YSIFLRSLCRADRMEE 921
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ D +E++GC D + LI ++ + A+ +M + A + I
Sbjct: 922 ALHLFDCIEKHGCSRDQYMYGSLIHVLLRRDKFEEAVAKLMEMKNEGILQSAHIYTSFIV 981
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+ ++ V A +L EM E P TF LI + + EA ++ + MK +
Sbjct: 982 YYFQKRDVVKALDVLREMKEN-GCEPTVVTFSALIRGYMAMDMVSEAWDVFQQMKLKGPA 1040
Query: 547 PFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P E + ++S K G ED + +S + PS+ ++ V EG+H A+ +
Sbjct: 1041 PDFETYSMFMSCLCKAGRSEDGLHLIHDMSDCGFIPSTVNFMTVVHGLNVEGKHELAESV 1100
Query: 603 LYKCPHHIRQDSKIS 617
L H+R+ IS
Sbjct: 1101 LLS-KWHLRKQRTIS 1114
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 183/438 (41%), Gaps = 49/438 (11%)
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIG----KKLEDMKIELSDNFVLTVLKELRIYPV 247
GM + +DN++ +V + G + G +KLE + + N V VLK R + V
Sbjct: 170 GMTVDSDVDNIS-AMVHRITGILRSEAPGPPVEQKLESLGANYTPNLVNMVLK--RCFKV 226
Query: 248 KALGF--FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
+ LGF F W + H T TYN +L ++ S +V M +E DI T+
Sbjct: 227 RQLGFWFFHWAKRLPDFHHTTETYNTMLYIVGEARSFGIMEELVGAMDREMCSKDIKTWT 286
Query: 306 KISRQFQKFRMMEDAVKLFEFM-------MDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+ + K R + + FE M +D +V L ++ + + P+L L F
Sbjct: 287 ILLSSYGKTRQIGKMLSTFEAMRKSESIWIDSKVYRTV------LHALCNADKPELALEF 340
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKL---------GRFDEAEKMMKAMKNAGFEPDNI 409
Y+ + +++ V I R L + G + + M++ MK+ P+
Sbjct: 341 -----YKDMPSNM--EVRTDILRLLMRCLATSDNTIEGVYLIRDDMIEGMKH----PEEY 389
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y++ + C AG+F +A V +M +N + + L++G C A +D AL +
Sbjct: 390 CYTEALQSFCIAGKFGEAWKVFQKM-KNKLLANSSALENLLRGLCRAGRMDEALQ-VTEY 447
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
M++ ++ + LING+L + A LL EM E P +++ +++ L +
Sbjct: 448 MKRTSGLNSTMFSFLINGYLRKGEHINALDLLREMRE-YGCVPLASSYTQVMQHLFATDQ 506
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK-EYPSSAAYLQ 585
EEA L M K P F I + G + A + + ++ + P+ AY
Sbjct: 507 CEEACGLFEEMLKNRVEPDIVTFTALIGGYVRSGHISKAWDVFRNINKNVQKPTLKAYTV 566
Query: 586 VFESFFNEGRHYEAKDLL 603
R EA LL
Sbjct: 567 FMRELCKVSRPLEAVVLL 584
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 185/464 (39%), Gaps = 48/464 (10%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+E KLE L T V VL++ + FF+W F ++ Y+ ML +
Sbjct: 200 VEQKLESLGANYTPNLVNMVLKRCFKVRQLGFWFFHWAKRLPDFHHTTETYNTMLYIVGE 259
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK--EIAM 199
S + M + C + +T+ +L K ++ + L+ F + M K I +
Sbjct: 260 ARSFGIMEELVGAMDREMCSKDIKTWTILLSSYGKTRQIGKM--LSTF-EAMRKSESIWI 316
Query: 200 DN-VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
D+ V +T++ + +D K EL+ F + + + R +
Sbjct: 317 DSKVYRTVLHALCNAD------------KPELALEFYKDMPSNMEVRT----DILRLLMR 360
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK-EGYEMDIDTYIKISRQFQKFRMM 317
NTI G+ +RD +++E MK E Y Y + + F
Sbjct: 361 CLATSDNTI--EGVYL-------IRD--DMIEGMKHPEEY-----CYTEALQSFCIAGKF 404
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSL--LLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+A K+F+ M + K +L LLR + D L +Y + L+ ++
Sbjct: 405 GEAWKVFQKMKN---KLLANSSALENLLRGLCRAGRMDEAL---QVTEYMKRTSGLNSTM 458
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + G A +++ M+ G P +Y+QV+ L + E+AC + +EM
Sbjct: 459 FSFLINGYLRKGEHINALDLLREMREYGCVPLASSYTQVMQHLFATDQCEEACGLFEEML 518
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+N PDI T+T LI G+ + + +A F + + V + R
Sbjct: 519 KNRVEPDIVTFTALIGGYVRSGHISKAWDVFRNINKNVQKPTLKAYTVFMRELCKVSRPL 578
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
A LL EM+E RP + TF LI L LEEA N+ R+
Sbjct: 579 EAVVLLKEMLE-YDFRPSERTFCWLISALRDKSYLEEASNVERM 621
>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like, partial [Brachypodium distachyon]
Length = 907
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 142/298 (47%), Gaps = 21/298 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TY ++ + ++ D + EM ++G + ++ + F + +++A
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL--GNSLS-KSVYD 377
+ + + D +QDCS S++N + +VA+ ESL GN S K +++
Sbjct: 605 NLVLQKLAD---TDMIQDCS-----ASTLN------IGKVAHIIESLAGGNHQSAKIMWN 650
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L KLGR +A + + +K GF PDN TYS +I G +G + A + DEM
Sbjct: 651 IVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSA 710
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P+I T+ LI G C + V RA+ F K+ K +A + LI+G A
Sbjct: 711 RLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEA 770
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
+KL +MI K ++P T+ LI L +EEA+ LL M + N P F+ Y
Sbjct: 771 FKLKQKMI-KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDP---NFITY 824
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 121/289 (41%), Gaps = 2/289 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N + Y+ ++ R ++ ++ +G ++ TY + + + K M
Sbjct: 191 EEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRM 250
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A K+ + + + K + + + + RV ++ G ++ VY+
Sbjct: 251 EEAEKVVKEIKENE-KIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYN 309
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ KLGR E EK+++A + G D +Y+ ++ G C+ G A D M N
Sbjct: 310 TMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRN 369
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G T+ L+ G C+ +D AL + M+++ + L++GF + A
Sbjct: 370 GFTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQA 429
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
L E + + R T T+I L RR+ EA L MK+ + P
Sbjct: 430 LNLWKETLARGLARN-VVTINTVINGLCKNRRMTEAEELFHRMKEWSCP 477
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/346 (19%), Positives = 154/346 (44%), Gaps = 8/346 (2%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+ + +++ +LR A ++D V +EM K G + + ++ Q + + AV
Sbjct: 90 FSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAV 149
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+F+ M P D ++ + + + + + + E +G ++ Y +
Sbjct: 150 AVFQQMRCAGTLP--DDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMD 207
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN-GCI 440
++G+ + A K++ +++ G P+ +TY+ ++ G CK GR E+A V+ E++EN +
Sbjct: 208 GYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIV 267
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D + LI G+C ++ A +M++ + + + +ING+ R+ KL
Sbjct: 268 IDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKL 327
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
L + E + + ++ TL++ + +A +M + + + ++ F
Sbjct: 328 L-QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFC 386
Query: 560 --GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
G ++DA + + L P+ + + + FF G+ +A +L
Sbjct: 387 SRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNL 432
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 96/230 (41%), Gaps = 24/230 (10%)
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
H+S + WN+V I K+ R + DA LFE + + P
Sbjct: 640 GNHQSAKIMWNIV-----------ILGLCKLGR-------VADARNLFEDLKVKGFIPDN 681
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEK 394
S L+ S+ + DL R E L L+ ++ Y+ + L K A
Sbjct: 682 FTYSSLIHGCSASGSIDLAFGLR----DEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVS 737
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ +++ G P+ ITY+ +I G CK G +A + +M + G P + T+TILI G C
Sbjct: 738 LFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLC 797
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
++ A+ +M+E N D + LI G+ + KL EM
Sbjct: 798 TQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 112/289 (38%), Gaps = 16/289 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N I+ + +L + N+ +E G ++ T + K R M +A
Sbjct: 405 GVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEA 464
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF M + L+ + DLG ++ + E+LG S +++
Sbjct: 465 EELFHRMKEWSCPCDSLTYRTLIDGYCKLG--DLGRATQIRIEMENLGFVPSVEMFNSFI 522
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L + + + M G P+ +TY +I G CK G DAC + EM E G
Sbjct: 523 TGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLK 582
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY--DADADLLDVLINGFLSQKRVNGAY 498
P++ ++L+ +VD A L K+ + + D A L++ G
Sbjct: 583 PNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNI------------GKV 630
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++E + + + + +I L R+ +A NL +K + + P
Sbjct: 631 AHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIP 679
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 96/234 (41%), Gaps = 5/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + G D+A K+ M G P+ I+ S ++ G KAG+ E A N+ E
Sbjct: 378 YNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETL 437
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G ++ T +I G C + A F +M E + D+ LI+G+ +
Sbjct: 438 ARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLG 497
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A ++ +EM E + P F + I L A++ + ++ M + P +
Sbjct: 498 RATQIRIEM-ENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGAL 556
Query: 556 IS---KFGTVEDASEFLKALSVKEYPSSAAYLQVFES-FFNEGRHYEAKDLLYK 605
I+ K G + DA + K + V S F+ EG+ EA +L K
Sbjct: 557 IAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQK 610
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ R ++ + +VE+M+ EG +I T I + A
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300
Query: 321 VKLFE----FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ F +G K + S L+ ++ NN +G+ + ++ S G+S +Y
Sbjct: 301 LEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNN--VGMAMELFHEKMSEGHSPDAIMY 356
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ LT+ GR ++A M +MK AGF+ D Y+ +I G C+ R +A +L EM+E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ T+ L+ G C A + KM++ L++G+ +++
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
A ++L M E + P + TLI+ L ++ A+ L MK+++ P
Sbjct: 477 ALRILRSMDES-GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 116/262 (44%), Gaps = 3/262 (1%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K N +TY+ ++ L +V + E EG+ D Y + + +EDA
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M + +K + ++L+ L + + + + +G Y+ +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFC--RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K G F ++++ M + G +P IT+ ++ G CK G+ ++A +L M+E+G P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI C +VD A+ F +M EK+ A+ + L+ G + A++L+
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552
Query: 503 EMIEKVRLRPWQATFKTLIEKL 524
+M E+ R P T L+E L
Sbjct: 553 QMREE-RCFPDYVTVDVLMEWL 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 95/236 (40%), Gaps = 37/236 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + I Y ++ L + + D ++ MK+ G+++D Y + F + + + +A
Sbjct: 348 GHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEA 407
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L + M + +P V + LL S D V + K G S + +
Sbjct: 408 YELLQEMKEVGIRPDVCTYNTLLSG--SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLV 465
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF---------------- 424
K+G+ DEA +++++M +G P+N+ Y+ +I LCK G
Sbjct: 466 HGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525
Query: 425 -------------------EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
E A ++D+M E C PD T +L++ E DR
Sbjct: 526 ANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR 581
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 100/236 (42%), Gaps = 14/236 (5%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ I AL ++ ++ M+ A PD +TY ++ GLCKAGR DA VLD M
Sbjct: 139 FNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGM 198
Query: 435 --EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLS 490
++ PD+ T ++ G C + V AL + M + + + + LI+ F
Sbjct: 199 SRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFCR 258
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
++ AY+ LVE +E + T T++ L A R A+ R K+ +P
Sbjct: 259 VGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR-EKRTVWPEGKG 316
Query: 551 PFVQYISKFGT------VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
V Y + G V A E F + +S P + Y + GR +A
Sbjct: 317 NAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 155/341 (45%), Gaps = 13/341 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + T + + L V + + + + GY ++ TY + + + +
Sbjct: 120 AGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISE 179
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLGNSLSKSV-- 375
A +LF M P+ L++ + N ++ L + N G + V
Sbjct: 180 ATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVIT 239
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L K+GR DEA+++ + MK G PD I+YS +I G C AG+++ + ++ DEM
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMV 299
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD+ T+++LI C +V A M+++ + + LI+GF +N
Sbjct: 300 DQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLN 359
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL----LRLMKKQNYPPFPEP 551
A +L + M K L P + ++ TLI +++EAMNL L++ K N +
Sbjct: 360 SARELFLSMPSK-GLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT- 417
Query: 552 FVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
++ + + G V DA + + K Y SA Q++ F +
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVM--KTYGVSANS-QIYGIFLD 455
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 131/289 (45%), Gaps = 11/289 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N ITYN ++ + + M +G E D +Y + + K +++A
Sbjct: 337 GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEA 396
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L+ M+ P+V LL+ + +G ++ ++ G S + +Y
Sbjct: 397 MNLYNEMLQVGKSPNVTTYGTLLKGL--FQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K EA ++ +K+ F+ + YS +I GLCKAG+ E A + +++ + G
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+ I+I G C +VD A + F KM E D + L+ GF ++ KL
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKL 574
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
L +M++K + P A+ +++ L + ++ ++LL P FP
Sbjct: 575 LHKMVQK-DVSPNAASCTIVVDMLCKDEKYKKFVDLL--------PKFP 614
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 135/322 (41%), Gaps = 16/322 (4%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A F+ MM P + + LL ++ IN+ +F + N+ G S +
Sbjct: 75 AFHFFDLMMRSHPIPPISSFNRLLGGLAKINH--YSQLFSLYNEMRLAGLSPDLFTLSIL 132
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L + R EA M + G+ P+ +TY+ +I GLC R +A + M++ GC
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEK------NYDADADLLDVLINGFLSQKR 493
P+ T+ LI+G C V+ AL +M+ N ++I+G R
Sbjct: 193 TPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGR 252
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
+ A +L EM + + P ++ TLI A + +++ +L M Q P F
Sbjct: 253 EDEAKELFEEM-KAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFS 311
Query: 553 --VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHH 609
+ + K G V +A + L+ + + P+ Y + + F G A++L P
Sbjct: 312 VLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSK 371
Query: 610 IRQDSKIS---LLFGSAKSNKV 628
+ +IS L+ G K+ KV
Sbjct: 372 GLEPDEISYTTLINGYCKTWKV 393
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 94/485 (19%), Positives = 205/485 (42%), Gaps = 35/485 (7%)
Query: 83 ENKLEELSPKLTHESVVY-VLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
E +L LSP L S++ L ++ E +A + ++ + P+ Y+ +++ L
Sbjct: 116 EMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGIL--RRGYIPNVVTYTTLIKGLCM 173
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
+ + + RM++ C TY +++ K + ++ + H M+ + +
Sbjct: 174 EHRISEATRLFLRMQKLGCTPNAVTYGTLI---KGLCQTGNVNIALKLHKEMLNDASQYG 230
Query: 202 VA--------KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
V ++D + +D+ + E+MK + ++ ++ Y GF
Sbjct: 231 VNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQ-------GMIPDVISYSTLIHGFC 283
Query: 254 ---RW-VGEH-------SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+W +H G + + +T++ ++ L + V + ++E M + G ++
Sbjct: 284 CAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLI 343
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
TY + F + A +LF M +P + L+ + + N
Sbjct: 344 TYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCK--TWKVKEAMNLYN 401
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ +G S + + Y + + L + G+ +A+K+ MK G ++ Y + GLCK
Sbjct: 402 EMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKND 461
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A + +E++ +I+ ++ LI G C A +++ A F K+ ++ D +
Sbjct: 462 CLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYN 521
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
++I+GF +V+ A +L E +E+ P + TL+ +LEE + LL M +
Sbjct: 522 IMIHGFCKVGQVDNA-NILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQ 580
Query: 543 QNYPP 547
++ P
Sbjct: 581 KDVSP 585
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 153/391 (39%), Gaps = 36/391 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID------TYIKISRQFQKF 314
G N +TY +++ L + +V + +EM + + ++ TY I K
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV 250
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
++A +LFE M P V S L+ F A K++ + +
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHG------------FCCAGKWDQSKHLFDEM 298
Query: 375 VYDGIHR----------ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
V G+ L K G+ EA+K+++ M G P+ ITY+ +I G C G
Sbjct: 299 VDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDL 358
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + M G PD ++T LI G+C +V A+ + +M++ + L
Sbjct: 359 NSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTL 418
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ G + +V A KL M + + + ++ L L EAM L +K N
Sbjct: 419 LKGLFQKGKVGDAKKLFGVM-KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
Query: 545 YPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
+ E + + + K G +E A E + LS + P Y + F G+ A
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 601 DLLYKCPHHIRQDSKI---SLLFGSAKSNKV 628
L K + I +LL G + NK+
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKL 568
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 111/482 (23%), Positives = 196/482 (40%), Gaps = 68/482 (14%)
Query: 63 STSPNSSL---ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWV 119
+TSP + LIL S L L S + T + V +L++L N KA FF +
Sbjct: 23 TTSPPEATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKIL 82
Query: 120 CDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
+ ++ + + + W + RM+ T+ I
Sbjct: 83 SHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAII--------- 133
Query: 180 ASDLAALNQFHDGMVKEIAMDNVA--------KTLVDVVLGSDWDDKIGKKLEDMKIE-- 229
A AA+ + H + ++M T++DV+ S + + +K +
Sbjct: 134 AERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGKFK 193
Query: 230 ---LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW 286
+S N ++ ++ P KAL + + E G N TYN +L R + W
Sbjct: 194 ADCVSYNIIVNGWCLIKRTP-KALEMLKEMVER-GLTPNLTTYNIMLNGYFRAGQTNEAW 251
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
EMKK ++D+ TY + ++ A +F M+ PSV
Sbjct: 252 GFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGVLPSV---------- 301
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ ++ + + L K + A + + M G+ P
Sbjct: 302 ---------------------------ATFNALIQILCKKDSVENAILIFEEMVKRGYVP 334
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
++ITY+ VI GLC G + A +++ ME++ C P+++T+ ILI+ C A E+++ L F
Sbjct: 335 NSITYNLVIRGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLF 394
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNG---AYKLLVEMIEKVRLRPWQATFKTLIEK 523
KM + + D ++LIN +K + A KLLVEM+++ L P + TF +++
Sbjct: 395 QKMGNGDCLPNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFL-PRKLTFNRVLDG 453
Query: 524 LL 525
LL
Sbjct: 454 LL 455
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 166/407 (40%), Gaps = 43/407 (10%)
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
A TL ++L S + + L I+ + V T+LK L + KAL FF+ + H Y
Sbjct: 29 ATTLAALILNSTNSQTLAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSY 88
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
H +++ + + AR R W +V M+ T+ I+ ++ AV
Sbjct: 89 CHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVT 148
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+F M + C + +SS N I
Sbjct: 149 VFMSMHE-------YGC---FQDLSSFNT---------------------------ILDV 171
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K R + A + KA+K F+ D ++Y+ ++ G C R A +L EM E G P+
Sbjct: 172 LCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKRTPKALEMLKEMVERGLTPN 230
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+ I++ G+ A + + A F +M ++ D D +I+G + A +
Sbjct: 231 LTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFN 290
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
+M++ L P ATF LI+ L +E A+ + M K+ Y P + ++ +
Sbjct: 291 QMVKDGVL-PSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHV 349
Query: 560 GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G ++ A E ++ + + P+ Y + F + G + DL K
Sbjct: 350 GEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQK 396
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 164/375 (43%), Gaps = 10/375 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + +L + + D +V++M + GY D T+ + +A
Sbjct: 74 GYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEA 133
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P++ +++ + D+ L F + NK E+ +++ I
Sbjct: 134 VALVDRMVQRGCQPNLVTYGVVVNGLC--KRGDIDLAFNLLNKMEAAKIEADVVIFNTII 191
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + K M+ G P+ +TYS +I LC GR+ DA +L +M E
Sbjct: 192 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 251
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI + A M++++ D D + LINGF R++ A ++
Sbjct: 252 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 311
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
M+ K P T+ TLI+ ++R+E+ L R M + + I
Sbjct: 312 FEFMVSK-DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370
Query: 560 --GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL-YKCPHHIRQDSK 615
G ++A + K + P Y + + N G+ +A ++ Y I+ D
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430
Query: 616 I--SLLFGSAKSNKV 628
I +++ G K+ KV
Sbjct: 431 IYTTMIEGMCKAGKV 445
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ + + + ++M K + DI TY + F ++ A ++F
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P + + L++ + G +FR + +G++++ Y + + L
Sbjct: 313 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGL 369
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G D A+K+ K M + G PD +TYS ++ GLC G+ E A V D M+++ DI
Sbjct: 370 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 429
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T +I+G C A +VD F + K + + +I+G S++ + AY LL +
Sbjct: 430 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 489
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E L P T+ TLI L + L+R M+
Sbjct: 490 MKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 526
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 7/227 (3%)
Query: 382 ALTKLGRFDE--AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A+ K+ +FD + ++ M G+EP +T S ++ G C R DA ++D+M E G
Sbjct: 51 AIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 110
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD T+T LI G N+ A+ +M+++ + V++NG + ++ A+
Sbjct: 111 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFN 170
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS-- 557
LL +M E ++ F T+I+ L R +++A+NL + M+ + P + IS
Sbjct: 171 LLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 229
Query: 558 -KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+G DAS+ L + K+ P+ + + ++F EG+ EA+ L
Sbjct: 230 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 276
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 110/243 (45%), Gaps = 1/243 (0%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ LF M+ PS+ + + LL +I+ + DL + + K LG S
Sbjct: 23 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTL 82
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ R +A ++ M G+ PD IT++ +I GL + +A ++D M +
Sbjct: 83 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 142
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC P++ T+ +++ G C ++D A KM +AD + + +I+ + V+
Sbjct: 143 RGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 202
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L EM E +RP T+ +LI L R +A LL M ++ P F I
Sbjct: 203 ALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261
Query: 557 SKF 559
F
Sbjct: 262 DAF 264
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 141/313 (45%), Gaps = 11/313 (3%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ +M K GYE I T + + + + DAV L + M++ Y+P + L+ +
Sbjct: 66 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 125
Query: 348 SINNPD--LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
N + LV R+ + G + Y + L K G D A ++ M+ A E
Sbjct: 126 LHNKASEAVALVDRMVQR----GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIE 181
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
D + ++ +I LCK +DA N+ EME G P++ T++ LI C+ A
Sbjct: 182 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 241
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ M+EK + + + LI+ F+ + + A KL +MI++ + P T+ +LI
Sbjct: 242 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGFC 300
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT---VEDASEFLKALSVKEYPS-SA 581
RL++A + M ++ P + + I F VED +E + +S + +
Sbjct: 301 MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 360
Query: 582 AYLQVFESFFNEG 594
Y + + F++G
Sbjct: 361 TYTTLIQGLFHDG 373
>gi|168028441|ref|XP_001766736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681945|gb|EDQ68367.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 560
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 151/323 (46%), Gaps = 34/323 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FF W E GYKH+ TY ++ ++ R + +++EM++EG E + TY ++
Sbjct: 50 ALKFFDWAKEQEGYKHDVCTYTTMIGIMGRARNFEACSRLLQEMRREGCEPCVVTYNRLI 109
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINN--------------- 351
+ + + +A+++F M + P V C+L+ L S + ++
Sbjct: 110 HAYGRANFLGEAMRIFYQMQEEGCSPDRVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQ 169
Query: 352 PD----------LGLVFRVANK---YESL---GNSLSKSVYDGIHRALTKLGRFDEAEKM 395
PD LG +V+ +E + G + S Y+ I K G + A K+
Sbjct: 170 PDTFTYSVIIHCLGKAGKVSEALKLFEEMVERGFAPSLVTYNIIIDLQAKSGNYVMAMKL 229
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
M++AGF PD +TYS ++ L + G ++A + +EME+ G +PD + +++
Sbjct: 230 YNDMQDAGFHPDRVTYSIMMEVLGQIGHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGK 289
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
A +RAL + KM++ + + + L+ +L ++ + A+ ++E ++ L P
Sbjct: 290 ARNAERALEWYQKMLDSGLTPNVQISNSLLGSYLRMQQFDLAFG-VIETMKAWGLVPTLQ 348
Query: 516 TFKTLIEKLLGARRLEEAMNLLR 538
T L+ + + + +NL+
Sbjct: 349 THTILLSSCTASAQHHQVVNLMH 371
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 97/219 (44%), Gaps = 7/219 (3%)
Query: 386 LGR---FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+GR F+ ++++ M+ G EP +TY+++I +A +A + +M+E GC PD
Sbjct: 77 MGRARNFEACSRLLQEMRREGCEPCVVTYNRLIHAYGRANFLGEAMRIFYQMQEEGCSPD 136
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ L+ H A D A+ + KM + + D V+I+ +V+ A KL
Sbjct: 137 RVTYCTLVDLHSKAGFHDNAMDMYQKMQQAGFQPDTFTYSVIIHCLGKAGKVSEALKLFE 196
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
EM+E+ P T+ +I+ + AM L M+ + P + ++ + +
Sbjct: 197 EMVER-GFAPSLVTYNIIIDLQAKSGNYVMAMKLYNDMQDAGFHPDRVTYSIMMEVLGQI 255
Query: 560 GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE 598
G +++A + + A V + + R+ E
Sbjct: 256 GHLQEAELMFNEMEQAGWVPDAPIYGVMVDMWGKARNAE 294
>gi|224107773|ref|XP_002333469.1| predicted protein [Populus trichocarpa]
gi|222836989|gb|EEE75382.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 7/396 (1%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW I LE I+ + V L+ ++ AL FF WVG+ +G+ T TYN +
Sbjct: 645 DWP-IIQDALEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAM 703
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V R + + ++ EM++ G+ + DT+ + Q+ + + E A+K+F M
Sbjct: 704 KVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCN 763
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+ L+ + + ++ + G+ K + L ++G+ EA
Sbjct: 764 PNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEAR 823
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
K + ++ AGF +YS I LC+AG E+A +++D++ D T L+ G
Sbjct: 824 KSVDSLCKAGFTVP-ASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGL 882
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
++ AL M + + + LI F +K + A ++ E +++ P
Sbjct: 883 LQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIF-ESMKQEGCEPT 941
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS 573
T+ LI + + EA N+ +K + P + + ++S + E L+ LS
Sbjct: 942 IVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLS 1001
Query: 574 ----VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
PS+ + VF EG+ A+ +L K
Sbjct: 1002 DMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQK 1037
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 158/362 (43%), Gaps = 10/362 (2%)
Query: 178 KKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
+K L A G + E + V + +V + + ++L+ + +L V
Sbjct: 116 QKEGSLLAFGDIKVGALNETDVSAVVHEITGIVRAENCTASMEERLDKVGFQLEPEIVEK 175
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL--ARHESVRDFWNVVEEMKKE 295
VLK P A FF WV G+ H T TYN +L AR SV D ++EEM+K
Sbjct: 176 VLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSVVDV--LLEEMEKY 233
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
E DI T+ + RQ+ K +++ A+ + E M +P V+ + L S+ ++
Sbjct: 234 SCERDIKTWTILIRQYGKAKLIGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIA 293
Query: 356 L-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L +++ + E N S+Y + L K G + + M P++ + V
Sbjct: 294 LEIYKEMVQREMEPNL---SLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCV 350
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ C AGR +A ++ +++ D + L++G AN + AL M K++
Sbjct: 351 LKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIADALEIVEIMKRKDF 410
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D + ++ING+L + ++ A L M E L P +T+ L++ L + ++
Sbjct: 411 -VDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHL-PTTSTYTELMQHLFRSNEYQKCC 468
Query: 535 NL 536
L
Sbjct: 469 EL 470
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 194/470 (41%), Gaps = 71/470 (15%)
Query: 72 LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV 131
++ A + + +E +L+++ +L E V VL++ P A FFNWV K F ++
Sbjct: 147 IVRAENCTASMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKT 206
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD 191
Y+ ML V L M++ C + +T+ +IL +++ KA + H+
Sbjct: 207 YNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTW-TIL--IRQYGKAKLIGKALLVHE 263
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG 251
M K +V + +V L S D G+ L + KE+ ++
Sbjct: 264 KMRKSGCEPDVE--VYEVTLHSLCDAGKGE------------IALEIYKEMVQREMEP-- 307
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
N Y +L LA+ V +V ++M + + D ++ + + +
Sbjct: 308 -------------NLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSY 354
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ +A++L I + N ++ L + V
Sbjct: 355 CVAGRIREALEL----------------------IRDLKNKEIQLDYEV----------- 381
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S+++ G+ RA R +A ++++ MK F D Y +I G + A ++
Sbjct: 382 SETLVKGLSRA----NRIADALEIVEIMKRKDF-VDGKVYGIIINGYLRRNELSKALDLF 436
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+E G +P T+T L+Q +NE + + +M+E+ + D+ + ++ G + Q
Sbjct: 437 QSMKEFGHLPTTSTYTELMQHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQ 496
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++ A+++ E +E ++P ++ I++L R +E + +L M+
Sbjct: 497 DHISEAWEVF-ETMEDKGIKPTWKSYSIFIKELCKVSRTDEIIKVLGKMQ 545
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF TY+ +++ +A F +L+EME+ C DIKTWTILI+ + A + +A
Sbjct: 199 GFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIRQYGKAKLIGKA 258
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
LL KM + + D ++ +V ++ + A ++ EM+++ + P + +K L+
Sbjct: 259 LLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQR-EMEPNLSLYKMLLN 317
Query: 523 KLLG-----------------------------------ARRLEEAMNLLRLMKKQNYP- 546
L A R+ EA+ L+R +K +
Sbjct: 318 CLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQL 377
Query: 547 --PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
E V+ +S+ + DA E ++ + K++ Y + + +A DL
Sbjct: 378 DYEVSETLVKGLSRANRIADALEIVEIMKRKDFVDGKVYGIIINGYLRRNELSKALDLF 436
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 122/287 (42%), Gaps = 26/287 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+++ P+ ++Y ++L L + M E + ++ +L A +
Sbjct: 302 QREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIR 361
Query: 182 DLAALNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+ AL D KEI +D V++TLV G ++I LE ++I +FV
Sbjct: 362 E--ALELIRDLKNKEIQLDYEVSETLVK---GLSRANRIADALEIVEIMKRKDFV----- 411
Query: 241 ELRIYPV------------KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
+ ++Y + KAL F+ + E G+ T TY +++ L R + +
Sbjct: 412 DGKVYGIIINGYLRRNELSKALDLFQSMKEF-GHLPTTSTYTELMQHLFRSNEYQKCCEL 470
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+EM + G E+D + I + + +A ++FE M D KP+ + S+ ++ +
Sbjct: 471 YDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKPTWKSYSIFIKELCK 530
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
++ D + +V K ++ + +++ + + + G D K+
Sbjct: 531 VSRTD--EIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKV 575
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 251 GFFRWVG--EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
G R VG G K N +T+N ++ + + + D V +EM +EG D +Y +
Sbjct: 243 GAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLV 302
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ K +A+ +F M P V + L+ + N L + + G
Sbjct: 303 GGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGN--LERAVTLVRQMRERG 360
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+++ + + K G D+A ++ MK +P + Y+ +I G C GR ++A
Sbjct: 361 LQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEAR 420
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L EME G PD+ T++ +I +C + A +M+EK DA LI
Sbjct: 421 ELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVL 480
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+KR++ A+ L MI K+ L+P + T+ +LI+ +E A++L M K P
Sbjct: 481 CGEKRLSDAHVLFKNMI-KLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLP 538
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 7/278 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ A + F+ M+ P+V ++L+R++ + L + G + Y
Sbjct: 171 LTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL--SILRDMRGAGCGPNVVTY 228
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A + G D AE+++ M+ G +P+ +T++ ++ G+CKAG+ EDA V DEM
Sbjct: 229 NTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVR 288
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD ++ L+ G+C A AL FA+M +K D LI+ +
Sbjct: 289 EGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L+ +M E+ L+ + TF LI+ L++A+ +R MK+ P + I
Sbjct: 349 AVTLVRQMRER-GLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+ + G +++A E L + K P Y + ++
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAY 445
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 174/437 (39%), Gaps = 48/437 (10%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL--------------- 171
P+ Y++++R L + K+ LR M+ C TY +++
Sbjct: 188 PNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERL 247
Query: 172 -GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL------GSDWDDKIGKKLE 224
G++++ +L N +GM K M++ K ++V G ++ +G +
Sbjct: 248 VGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCK 307
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
+ L+V E+ G + +T+ ++ V+ + ++
Sbjct: 308 ----AGCSHEALSVFAEM---------------TQKGIMPDVVTFTSLIHVMCKAGNLER 348
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+V +M++ G +M+ T+ + F K ++DA+ M KPSV + L+
Sbjct: 349 AVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALIN 408
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ D + ++ E+ G Y I A K A ++ + M G
Sbjct: 409 GYCMVGRMDE--ARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGV 466
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD ITYS +I LC R DA + M + G PD T+T LI GHC V+ AL
Sbjct: 467 LPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALS 526
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
KM++ D VLING R A +LL ++ + P A K + L
Sbjct: 527 LHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHE---DPIPANTK--YDAL 581
Query: 525 LGARRLEEAMNLLRLMK 541
+ R E ++L L+K
Sbjct: 582 MHCCRKAELKSVLALLK 598
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 123/307 (40%), Gaps = 18/307 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K + +TY+ I+ ++ + + ++M ++G D TY + R + +
Sbjct: 427 EAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRL 486
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA LF+ M+ +P + L+ N + L +K G Y
Sbjct: 487 SDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLH--DKMVKAGVLPDVVTYS 544
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF---------------GLCKAG 422
+ L+K R EA++++ + + P N Y ++ G C G
Sbjct: 545 VLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKG 604
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+A V M + D +++LI GHC A V +AL +M++ + ++
Sbjct: 605 LMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTI 664
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LI G V A +++ +++ L +A+ K LI+ L ++ +++L M K
Sbjct: 665 SLIRGLFENGMVVEADQVIQQLLNYCSLADAEAS-KALIDLNLNEGNVDAVLDVLHGMAK 723
Query: 543 QNYPPFP 549
P P
Sbjct: 724 DGLLPSP 730
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 114/478 (23%), Positives = 207/478 (43%), Gaps = 55/478 (11%)
Query: 102 LRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCY 161
LRK D KA+ + + + PS Y++M+ L L + RMK++
Sbjct: 230 LRK--GDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKS 287
Query: 162 IEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK 221
+ T+ S++ L KA + AA F + + ++ D +T ++ G K+ K
Sbjct: 288 PDLFTFSSMIHGLSKAGNFN--AAEKVFQEMIESGLSPD--VRTYNAMLSGLFRTGKLNK 343
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPV-------KALGFFRWVGEHSGYKHNTITYNGILR 274
E + +N V + I + +A+ +++ + E G K ++ TY ++
Sbjct: 344 CFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHER-GLKADSTTYGLLIN 402
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L ++ + ++EE + EG ++D Y + K M+E AV+L M K
Sbjct: 403 GLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRK- 461
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
L + + S+ +G RA + +EA
Sbjct: 462 --------------------------------LNSHVFNSLINGYVRAF----KLEEAIS 485
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ MK+ P ++Y+ +I GLCKA RF DA L EM E G PD+ T+++LI G C
Sbjct: 486 VLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLC 545
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+VD AL + + + K D + +++I+G + ++V+ A ++ +M +V P
Sbjct: 546 RGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQM-RQVNCVPDL 604
Query: 515 ATFKTLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY--ISKFGTVEDASEFL 569
T T++E L A EA+ + R+++ P + + + V DA EFL
Sbjct: 605 VTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFL 662
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 217/554 (39%), Gaps = 85/554 (15%)
Query: 91 PKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
PK+ ++V L K + +P A A F+ C + V+ +LR L++ +
Sbjct: 5 PKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGR 64
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
+ M+ C E+ LS + K ALN F + +VD+
Sbjct: 65 IVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQ--ALNLFQN--------------MVDI- 107
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
G + + S N +L E + L FF + + +G N TYN
Sbjct: 108 FGCNPGIR------------SFNSMLNAFIESNQWREAEL-FFTYF-QTAGMSPNLQTYN 153
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++++ + ++ M + G DI +Y + K + DAV+LF+ M
Sbjct: 154 ILIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVR 213
Query: 331 PYKPSVQDCSLLLRSISSINNPDLGLVFRVAN---KYESLGNSLSKSV--YDGIHRALTK 385
P V ++L+ + F AN K +S+ SV Y+ + L K
Sbjct: 214 GVNPDVMCYNILIDGFLRKGD------FVKANEIWKRLLTESSVYPSVETYNIMINGLCK 267
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
LG+ DE+ +M MK PD T+S +I GL KAG F A V EM E+G PD++T
Sbjct: 268 LGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRT 327
Query: 446 ----------------------------------WTILIQGHCAANEVDRALLCFAKMME 471
+ +LIQG +V++A+ + + E
Sbjct: 328 YNAMLSGLFRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHE 387
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEKVRLRPWQATFKTLIEKLLGARRL 530
+ AD+ +LING +N A ++L E E L + + +++ L L
Sbjct: 388 RGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTF--AYSSMVHGLCKKGML 445
Query: 531 EEAMNLLRLMKKQ----NYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQ 585
E+A+ L+ MKK N F Y+ F +E+A L+ + K+ P+ +Y
Sbjct: 446 EQAVELIHQMKKNRRKLNSHVFNSLINGYVRAF-KLEEAISVLREMKSKDCAPTVVSYNT 504
Query: 586 VFESFFNEGRHYEA 599
+ R +A
Sbjct: 505 IINGLCKAERFSDA 518
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 147/323 (45%), Gaps = 11/323 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L + V + + +G D+ T+ + + E A++LF
Sbjct: 371 NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELF 430
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M + P S+L+ S+ S L + + E G + + VY+ + L
Sbjct: 431 EEMKEKGCDPDEFTYSILIESLCSERR--LKEALMLLKEMELSGCARNVVVYNTLIDGLC 488
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K R +AE + M+ G ++TY+ +I GLCK+ R E+A ++D+M G PD
Sbjct: 489 KNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKF 548
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T +++ C ++ RA M + D LI G RV+ A KLL +
Sbjct: 549 TYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSV 608
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYISKFG 560
K + QA + +I+ L +R +EAM L R M ++ PP + F + G
Sbjct: 609 QMKGMVLTPQA-YNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGG 667
Query: 561 TVEDASEF----LKALSVKEYPS 579
+++A +F L+ + E+PS
Sbjct: 668 PIQEAVDFTVEMLEKGILPEFPS 690
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N ++R L + +R ++E+M G D T+ + + F + +E A+++ E M
Sbjct: 201 TFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELM 260
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ + + ++L+ + + L F YE G + ++ + L + G
Sbjct: 261 VESGCELTSVSVNVLVNGLCKEGRIEEALRF----IYEEEGFCPDQVTFNALVNGLCRTG 316
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ +MM M GFE D TY+ +I GLCK G ++A +L M C P+ T+
Sbjct: 317 HIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYN 376
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI C N V+ A + K D + LI G A +L EM EK
Sbjct: 377 TLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEK 436
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
P + T+ LIE L RRL+EA+ LL+ M+
Sbjct: 437 -GCDPDEFTYSILIESLCSERRLKEALMLLKEME 469
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 133/291 (45%), Gaps = 5/291 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+N +++ L + + EEMK++G + D TY + R +++A
Sbjct: 402 GVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEA 461
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L + M +V + L+ + N +G + ++ E LG S S Y+ +
Sbjct: 462 LMLLKEMELSGCARNVVVYNTLIDGLCKNNR--VGDAEDIFDQMEMLGVSRSSVTYNTLI 519
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R +EA ++M M G +PD TY+ ++ C+ G + A +++ M NGC
Sbjct: 520 NGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCE 579
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C A VD A + K + +I +KR A +L
Sbjct: 580 PDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRL 639
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLL-GARRLEEAMNL-LRLMKKQNYPPFP 549
EM+EK P T+K + L G ++EA++ + +++K P FP
Sbjct: 640 FREMMEKGD-PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFP 689
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 152/396 (38%), Gaps = 46/396 (11%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F+W Y + ++ +LR LAR S ++ +M +D T++
Sbjct: 75 ALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFL 134
Query: 309 RQFQKFRMMEDAVKLFEFMM--DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + + +M D KP + ++ L + N L LV + +K +
Sbjct: 135 ETYATSHHLHAEINPLFLLMERDFAVKPDTRFYNVALSLLVKANK--LKLVETLHSKMVA 192
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ------------- 413
S ++ + RAL K + A M++ M N G PD T++
Sbjct: 193 DAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEG 252
Query: 414 ----------------------VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
++ GLCK GR E+A + EE G PD T+ L+
Sbjct: 253 ALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFI--YEEEGFCPDQVTFNALVN 310
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G C + + L M+EK ++ D + LI+G ++ A ++L M+ +
Sbjct: 311 GLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSR-DCE 369
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
P T+ TLI L +E A L R++ + P F +Q + E A E
Sbjct: 370 PNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMEL 429
Query: 569 LKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K P Y + ES +E R EA LL
Sbjct: 430 FEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLL 465
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 126/323 (39%), Gaps = 40/323 (12%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SG N + YN ++ L ++ V D ++ ++M+ G TY + K + +
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A +L + M+ KP K Y
Sbjct: 529 EEAAQLMDQMIMEGLKP-------------------------------------DKFTYT 551
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + G A +++ M G EPD +TY +I GLCKAGR + A +L ++
Sbjct: 552 TMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMK 611
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS-QKRVNG 496
G + + + +IQ C A+ F +MMEK D ++ G + +
Sbjct: 612 GMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQE 671
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL-MKKQNYPPFPEPFVQY 555
A VEM+EK L P +F L E L + + L+ + M+K + ++
Sbjct: 672 AVDFTVEMLEKGIL-PEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKGRFSQSETSIIRG 730
Query: 556 ISKFGTVEDASEFLKALSVKEYP 578
K DA L A+ ++ P
Sbjct: 731 FLKIQKFNDALANLGAILDRKKP 753
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 98/438 (22%), Positives = 183/438 (41%), Gaps = 60/438 (13%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W K LE +K+++ V ++L E+ + + FF+W G+ ++H+ TY ++R
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSIL-EIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIR 134
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS--------RQFQKFRMMEDAVKLFEF 326
L + + ++E+ + +TY+ +S + + +M+ A+ +F
Sbjct: 135 CLEEARLYGEMYRTIQEVVR-------NTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 327 MMDGPYKPSVQDC-SLLLRSISSINNPDLGLVF-RVANKYESLGNSLSKSVYDGIHRALT 384
KP+ S++L + + + V+ + N+ + ++++ Y + +
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTIT---YSALISSYE 244
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
KLGR D A ++ MK+ +P Y+ ++ K G+ E A ++ +EM+ GC P +
Sbjct: 245 KLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVY 304
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI+G A VD A + M+ D L+ L+N RV + EM
Sbjct: 305 TYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEM 364
Query: 505 --------------------------------IEKVR---LRPWQATFKTLIEKLLGARR 529
+K++ + P + T+ LI+ R
Sbjct: 365 GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNR 424
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVK-EYPSSAAYLQ 585
+E+A+ LL M ++ +PP P + I+ G E A E K L SS Y
Sbjct: 425 VEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAV 484
Query: 586 VFESFFNEGRHYEAKDLL 603
+ + F G+ EA DL
Sbjct: 485 MIKHFGKCGKLSEAVDLF 502
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 97/459 (21%), Positives = 189/459 (41%), Gaps = 49/459 (10%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRN---LVNKDSLKQFWV 150
T+ SV+ +L + + EK + +C++ P + YS ++ + L DS + +
Sbjct: 199 TYNSVILMLMQ-EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLF- 256
Query: 151 TLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVV 210
MK++ E+ Y ++LG+ K K AL+ F + +K T +++
Sbjct: 257 --DEMKDNCMQPTEKIYTTLLGIYFKVGKVEK--ALDLFEE--MKRAGCSPTVYTYTELI 310
Query: 211 LGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYN 270
G K G+ E A GF++ + G + + N
Sbjct: 311 KGLG---KAGRVDE------------------------AYGFYKDM-LRDGLTPDVVFLN 342
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ-FQKFRMMEDAVKLFEFMMD 329
++ +L + V + NV EM + +Y + + F+ + + F+ M
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
PS S+L+ N + L+ + + + G + Y + AL K R+
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALL--LLEEMDEKGFPPCPAAYCSLINALGKAKRY 460
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+ A+++ K +K + Y+ +I K G+ +A ++ +EM+ G PD+ + L
Sbjct: 461 EAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNAL 520
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+ G A ++ A KM E AD + ++++NGF G + +EM E ++
Sbjct: 521 MSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFAR----TGVPRRAIEMFETIK 576
Query: 510 ---LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
++P T+ TL+ A EEA ++R MK + +
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 113/510 (22%), Positives = 208/510 (40%), Gaps = 60/510 (11%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W + E LE L K+ H V +L ++D + FF W ++ F+ + Y ++R
Sbjct: 76 WGPDAEKALEVLKLKVDHRLVRSIL-EIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIR 134
Query: 138 NLVNKDSLKQFWVTLRR-MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
L + + T++ ++ + + ++ L +AK S AL+ F+ ++
Sbjct: 135 CLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSK--ALSVFYQAKGRK 192
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV 256
+ V ++L + +K+ ++ E+ + E +P
Sbjct: 193 CKPTSSTYNSVILMLMQEGQH---EKVHEVYTEMCN--------EGDCFP---------- 231
Query: 257 GEHSGYKHNTITYNGILRV---LARHES-VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+TITY+ ++ L R++S +R F +EMK + Y + +
Sbjct: 232 --------DTITYSALISSYEKLGRNDSAIRLF----DEMKDNCMQPTEKIYTTLLGIYF 279
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLG 368
K +E A+ LFE M P+V + L++ LG RV Y + L
Sbjct: 280 KVGKVEKALDLFEEMKRAGCSPTVYTYTELIKG--------LGKAGRVDEAYGFYKDMLR 331
Query: 369 NSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-GRFE 425
+ L+ V + + L K+GR +E + M P ++Y+ VI L ++
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+ + D+M+ + P T++ILI G+C N V++ALL +M EK + LI
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
N KR A +L E+ E + +I+ +L EA++L MK Q
Sbjct: 452 NALGKAKRYEAADELFKELKENFG-NVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGS 510
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKAL 572
P + +S K G + +A+ L+ +
Sbjct: 511 GPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 8/196 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G+ Y ++ L + + + +E+K+ + Y + + F K +
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKL 495
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSI---SSINNPDLGLVFRVANKYESLGNSLSKS 374
+AV LF M + P V + L+ + IN + + K E G +
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN-----SLLRKMEENGCRADIN 550
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ I + G A +M + +K++G +PD +TY+ ++ AG FE+A ++ EM
Sbjct: 551 SHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREM 610
Query: 435 EENGCIPDIKTWTILI 450
++ G D T++ ++
Sbjct: 611 KDKGFEYDAITYSSIL 626
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 110/496 (22%), Positives = 204/496 (41%), Gaps = 31/496 (6%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P Y++ + L + + + L++M E C TY +++ G+LK + +A
Sbjct: 40 PDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAV 99
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS--------DNFVLT 237
L Q MV++ + TL + D K G+ E +I + D FV T
Sbjct: 100 LEQ----MVEK----GNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 151
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKH------NTITYNGILRVLARHESVRDFWNVVE- 290
L + K + E + KH + +TY ++ L + + + V +
Sbjct: 152 ALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDD 211
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
E + G+ D TY I K +E+ + F M + Y+P + L+ +
Sbjct: 212 EAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGF--MK 269
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ RV + G +S Y+ I L K GR EA AM+ G +T
Sbjct: 270 AKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVT 329
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
YS ++ G C G A + M + GC P++ ++ I+I+G C A ++ +A F K++
Sbjct: 330 YSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLL 389
Query: 471 EKNYDADADLLDVLINGFLSQ-KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ D + ++G + V+ +L M+ + P ++ L++ + A
Sbjct: 390 QRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ-GTSPNLHSYSILMDGICRAGG 448
Query: 530 LEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQV 586
LE A+ + R M + P F ++++ G V++A E + L + P + +Y +
Sbjct: 449 LEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSL 508
Query: 587 FESFFNEGRHYEAKDL 602
+ R EA+ L
Sbjct: 509 LDGLSRCERMEEARLL 524
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 141/293 (48%), Gaps = 12/293 (4%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN + L + E V D + ++++M ++ TY + K ++
Sbjct: 35 RAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLD 94
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--VY 376
+A+ + E M++ P+++ ++++ +S + V + LGN VY
Sbjct: 95 EAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFV----DMLGNGCRPDAFVY 150
Query: 377 DGIHRALTKLGRFDEAEKMMKAMK----NAGFEPDNITYSQVIFGLCKAGRFEDACNVL- 431
+ + L K G+ +EA + K +A PD +TY+ +I GLCKAGR +A V
Sbjct: 151 TALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFD 210
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
DE E G IPD T+T +I G C V+ F +M + Y+ DA LI+GF+
Sbjct: 211 DEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKA 270
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
K + A+++ +M++ + T+ +++ L A R+ EA M+++
Sbjct: 271 KMIPKAHRVYRQMLQSGTVVS-TVTYNIILDGLCKAGRVAEAYATFLAMEERG 322
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 102/227 (44%), Gaps = 10/227 (4%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + R DEA +++ AG EPD +TY+ I GLCKA R +DA +L +M+E C+P
Sbjct: 16 GLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLP 75
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
T+T L+ G A +D A+ +M+EK V+I+G RV A ++
Sbjct: 76 TTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIF 135
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYISKFG 560
V+M+ RP + LI+ L + + EEA L + + + P V Y S
Sbjct: 136 VDMLGN-GCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLID 194
Query: 561 TVEDASEFLKALSVKE--------YPSSAAYLQVFESFFNEGRHYEA 599
+ A L+A V + P + Y + + GR E
Sbjct: 195 GLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 241
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 92/206 (44%), Gaps = 9/206 (4%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD + ++ VI GLC+ R ++A +VL+ GC PD T+ + I G C A VD A
Sbjct: 5 PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM EK L++G L R++ A +L +M+EK P T+ +I+ L
Sbjct: 65 LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLS 123
Query: 526 GARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY----- 577
A R+EEA + M P ++ + K G E+A K + +++
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P Y + + GR EA+ +
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVF 209
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C PD+ +T++I G C +D A + + + D +V I+G +RV+ A+
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+LL +M EK + P T+ L++ LL A RL+EAM +L M ++ P + + +
Sbjct: 63 QLLKKMDEK-KCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDG 121
Query: 556 ISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+SK G VE+A F+ L P + Y + + G+ EA L
Sbjct: 122 LSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYAL 169
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 6/183 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF-QKFRMMED 319
G + N ++YN I+R L R + + E++ + D+ T+ Q+ + D
Sbjct: 357 GCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSD 416
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
V+LFE M+ P++ S+L+ I ++ L +FR + S G + V++
Sbjct: 417 GVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFR---EMVSRGVAPDVVVFNT 473
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ R L GR DEA ++ + ++ PD +Y ++ GL + R E+A + M+ G
Sbjct: 474 LIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEARLLSFHMKLQG 532
Query: 439 CIP 441
C P
Sbjct: 533 CAP 535
>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Brachypodium distachyon]
Length = 627
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 9/361 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+ R + E SG + N + Y+ +L+ + V EEM G E D+ Y +
Sbjct: 166 KAVELLREMCE-SGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGL 224
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ ++ A ++ + MM+ +P+V ++L+ S+ + + R N
Sbjct: 225 IDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLR--NNMLEK 282
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG--FEPDNITYSQVIFGLCKAGRFE 425
G +L Y+ + L+ + DEA +++ M + EP+ +T++ VI GLCK GR
Sbjct: 283 GVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMR 342
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A V D M ENGC ++ T+ +LI G ++V +A+ +M + D+ +LI
Sbjct: 343 QAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILI 402
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NGF +V+ A LL +M + + P + L+ L +E+A N M K
Sbjct: 403 NGFCKMWQVDRAESLLSKM-RRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHKNCK 461
Query: 546 PPFP--EPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + + A EFLK L P S Y + F N G A+ +
Sbjct: 462 LDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERV 521
Query: 603 L 603
L
Sbjct: 522 L 522
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 118/282 (41%), Gaps = 3/282 (1%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ ++YN +L L R D + + +Y + R R AV L
Sbjct: 76 RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAVGL 135
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
M +P V L+R + + D+ + + G + VY + +
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLC--DAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K GR++ K+ + M G EPD + Y+ +I LC+ G+ + A V+D+M E G P++
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ +LI C V A+ M+EK DA + LI G ++ A LL E
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313
Query: 504 MIE-KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
MI + + P TF ++I L R+ +A + +M +
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENG 355
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 167/384 (43%), Gaps = 24/384 (6%)
Query: 118 WVCDKKQFR--------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
W C K F P +Y+ ++ +L + +K+ + +M E TY
Sbjct: 199 WECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNV 258
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLEDM-- 226
++ + K+ S A++ ++ + K +A+D V TL+ + G D+ LE+M
Sbjct: 259 LINSM--CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIH 316
Query: 227 -KIELSDNFVL--TVLKEL-RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+ + N V +V+ L + ++ R + +G N +T+N ++ L R V
Sbjct: 317 GETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKV 376
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ +++EM G E D TY + F K ++ A L M +P + L
Sbjct: 377 KKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPL 436
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L ++ + G++ + N ++ + + V Y + +L AE+ +K M
Sbjct: 437 LAALC-----EQGMMEQARNFFDEMHKNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHML 491
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G PD++TYS +I +G A VL +M +G +PD+ + LI+G+ A + +
Sbjct: 492 DEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTE 551
Query: 461 RALLCFAKMMEKNYDADADLLDVL 484
+ L +M K+ D+ ++ +
Sbjct: 552 KVLELIREMTAKDIALDSKIISTI 575
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 105/254 (41%), Gaps = 25/254 (9%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ L + +R + V + M + G ++ T+ + + ++ A++L
Sbjct: 324 NVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELM 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH---- 380
+ M +P S+L+ + D + ESL LSK DGI
Sbjct: 384 DEMASSGLEPDSFTYSILINGFCKMWQVD---------RAESL---LSKMRRDGIEPELV 431
Query: 381 ------RALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
AL + G ++A M KN D + YS +I G C+ + A L
Sbjct: 432 HYIPLLAALCEQGMMEQARNFFDEMHKNCKL--DVVAYSTMIHGACRLRDRKSAEEFLKH 489
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + G IPD T+++LI + ++ A +M + D + D LI G+ ++
Sbjct: 490 MLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGD 549
Query: 494 VNGAYKLLVEMIEK 507
+L+ EM K
Sbjct: 550 TEKVLELIREMTAK 563
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 72/356 (20%), Positives = 149/356 (41%), Gaps = 25/356 (7%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ P+ Y++++ ++ + S+K+ M E ++ TY +++ L +
Sbjct: 246 ERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMD 305
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK--KLEDMKIE--LSDNFV-- 235
+ A+ + + E ++ T V+ G ++ + ++ DM E + N V
Sbjct: 306 E--AMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTF 363
Query: 236 -LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
L + LR++ VK SG + ++ TY+ ++ + V +++ +M++
Sbjct: 364 NLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRR 423
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G E ++ YI + + MME A F+ M ++C L + + S++ +
Sbjct: 424 DGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH--------KNCKLDVVAYSTMIHGAC 475
Query: 355 GLVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
L R + + E L + L + + Y + G AE+++K M +GF PD
Sbjct: 476 RLRDRKSAE-EFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDV 534
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ +I G G E ++ EM D K + + A NE +ALL
Sbjct: 535 AVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVANNE-GKALL 589
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 8/292 (2%)
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
DAV LF ++ YKP ++L+R + D FR+ N S G Y+
Sbjct: 159 DAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEA--FRLLNDLRSFGCLPDVITYNT 216
Query: 379 IHRALTKLGRFDEAEKMMKAMK-NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L ++ D A ++K + N F PD ++Y+ +I G CK + E+ + EM +
Sbjct: 217 LIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRS 276
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P+ T+ LI G ++ AL + KM+ + D LING+ +V+ A
Sbjct: 277 GTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQA 336
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQ 554
+ +M +K + TF L+ L RL +A ++LRL+ + + P P P +
Sbjct: 337 MDMWHKMNDK-NIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVID 395
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G V++A++ + + V P + + +GR EA + +K
Sbjct: 396 GYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHK 447
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 137/341 (40%), Gaps = 10/341 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + YN + VL R V D + E+ + Y+ T + R + +++A +L
Sbjct: 140 NAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEIDEAFRLL 199
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRA 382
+ P V + L+ + IN D R K L + V Y I
Sbjct: 200 NDLRSFGCLPDVITYNTLIHGLCRINEVDRA---RSLLKEVCLNGEFAPDVVSYTTIISG 256
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K + +E + M +G P+ T++ +I G K G A + ++M GC+PD
Sbjct: 257 YCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPD 316
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T+T LI G+ +V +A+ + KM +KN A VL++G + R++ A +L
Sbjct: 317 VATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDIL- 375
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYISK 558
++ + + P + +I+ + ++EA ++ M+ P F + + K
Sbjct: 376 RLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMK 435
Query: 559 FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
E F K L+V P + G EA
Sbjct: 436 GRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEA 476
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 83/184 (45%), Gaps = 4/184 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG NT T+N ++ + + + E+M +G D+ T+ + + + +
Sbjct: 276 SGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQ 335
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A+ ++ M D ++ S+L+ + + N + R+ N+ + + +Y+
Sbjct: 336 AMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPF---IYNP 392
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ K G DEA K++ M+ +PD +T++ +I G C GR +A + +M G
Sbjct: 393 VIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVG 452
Query: 439 CIPD 442
C PD
Sbjct: 453 CAPD 456
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 89/224 (39%), Gaps = 4/224 (1%)
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
+GR D + +++ ++ + + Y+ + L + + DA + E+ P T
Sbjct: 119 VGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYT 178
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
IL++G C A E+D A + D + LI+G V+ A LL E+
Sbjct: 179 VNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVC 238
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
P ++ T+I ++EE L M + P F I FG + D
Sbjct: 239 LNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDM 298
Query: 566 SEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ L K L P A + + +F G+ ++A D+ +K
Sbjct: 299 ASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHK 342
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 79/187 (42%), Gaps = 6/187 (3%)
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TYS ++ LC++ A V D M +G IPD + L+ + +D + A
Sbjct: 72 LTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLAD 131
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
+ N +A + + L N + Q +V A L E+I ++R +P T L+ L A
Sbjct: 132 VQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELI-RLRYKPVTYTVNILMRGLCRAG 190
Query: 529 RLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK--ALSVKEYPSSAAY 583
++EA LL ++ P + + + V+ A LK L+ + P +Y
Sbjct: 191 EIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSY 250
Query: 584 LQVFESF 590
+ +
Sbjct: 251 TTIISGY 257
>gi|356507504|ref|XP_003522504.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Glycine max]
Length = 555
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 10/246 (4%)
Query: 369 NSLSKSV-----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
N LS SV + I L + R DEA ++ MK GF+PD I YS +I G CK GR
Sbjct: 4 NELSLSVPSVISFSAIFSGLCHVKRADEAHRLFNVMKERGFQPDLICYSVLINGYCKLGR 63
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E+A + L +E +G IK ++ LI G +A + A + +M +K D L +
Sbjct: 64 LEEAISFLRLLERDGLALGIKGYSSLIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTI 123
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKK 542
LI G S+ RV A K+L EMI+ + L P + +I+ L L+ A +L L + +
Sbjct: 124 LIRGLSSEGRVGEAAKMLGEMIQ-IGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEH 182
Query: 543 QNYPPFPEP--FVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
Q + + + K G E A E F K + +PS + + + G+ EA
Sbjct: 183 QGFHNVCTHTIIICDLCKRGMAEKAQEIFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEA 242
Query: 600 KDLLYK 605
LLYK
Sbjct: 243 HLLLYK 248
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 140/345 (40%), Gaps = 61/345 (17%)
Query: 256 VGEHSGYKHNTITY----NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
V + G++ + I Y NG + L R E F ++E ++G + I Y + F
Sbjct: 38 VMKERGFQPDLICYSVLINGYCK-LGRLEEAISFLRLLE---RDGLALGIKGYSSLIAGF 93
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
R +A + M P V ++L+R +SS +G ++ + +G
Sbjct: 94 FSARRYNEAHAWYGRMFKKGIVPDVVLYTILIRGLSS--EGRVGEAAKMLGEMIQIGLVP 151
Query: 372 SKSVYDGIHRALTKLGRFDEAEKM-MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y+ I + L +G D A + ++ ++ GF + T++ +I LCK G E A +
Sbjct: 152 DAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGFH-NVCTHTIIICDLCKRGMAEKAQEI 210
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM-----------MEKNYDADAD 479
++ME+ GC P I T+ L+ G C A +++ A L KM + + D D
Sbjct: 211 FNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKMEIGRSPSLFFRLSQGSDQVLD 270
Query: 480 ----------------LLD---------------------VLINGFLSQKRVNGAYKLLV 502
LLD VLINGF +NGA KL
Sbjct: 271 SVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFK 330
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+M K L P T+ TLI+ L R E+A + + M K P
Sbjct: 331 DMQNK-GLSPNPVTYGTLIDGLFRVGREEDAFKIHKHMLKHGCEP 374
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 177/415 (42%), Gaps = 48/415 (11%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
++A FN V ++ F+P YS+++ L++ LR ++ D + + Y S
Sbjct: 30 DEAHRLFN-VMKERGFQPDLICYSVLINGYCKLGRLEEAISFLRLLERDGLALGIKGYSS 88
Query: 170 ILGVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIG---KKLE 224
++ A++ ++ A F G+V ++ + + ++ G + ++G K L
Sbjct: 89 LIAGFFSARRYNEAHAWYGRMFKKGIVPDVVLYTI------LIRGLSSEGRVGEAAKMLG 142
Query: 225 DM-KIELSDNFVL--TVLKELRIYPV--KALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
+M +I L + V ++K L + +A + EH G+ HN T+ I+ L +
Sbjct: 143 EMIQIGLVPDAVCYNEIIKGLCDVGLLDRARSLQLEISEHQGF-HNVCTHTIIICDLCKR 201
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS-VQD 338
+ +M+K G I T F +MDG K +++
Sbjct: 202 GMAEKAQEIFNKMEKLGCFPSIVT--------------------FNALMDGLCKAGKLEE 241
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMM 396
LLL + +P L FR++ + + +S L K V + + G+ +A K++
Sbjct: 242 AHLLLYKMEIGRSPSL--FFRLSQGSDQVLDSVALQKKV-----EQMCEAGQLLDAYKLL 294
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ +G PD +TY+ +I G CKA A + +M+ G P+ T+ LI G
Sbjct: 295 IQLAGSGVMPDIVTYNVLINGFCKASNINGALKLFKDMQNKGLSPNPVTYGTLIDGLFRV 354
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+ A M++ + ++ L+ +KRV+ A+ L +E ++ +R R
Sbjct: 355 GREEDAFKIHKHMLKHGCEPSFEVYRALMTWLCRKKRVSQAFSLYLEYLKNLRGR 409
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 28/227 (12%)
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP------------- 406
+ NK E LG S ++ + L K G+ +EA ++ M+ G P
Sbjct: 210 IFNKMEKLGCFPSIVTFNALMDGLCKAGKLEEAHLLLYKME-IGRSPSLFFRLSQGSDQV 268
Query: 407 -DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
D++ + + +C+AG+ DA +L ++ +G +PDI T+ +LI G C A+ ++ AL
Sbjct: 269 LDSVALQKKVEQMCEAGQLLDAYKLLIQLAGSGVMPDIVTYNVLINGFCKASNINGALKL 328
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F M K + LI+G R A+K+ M+ K P ++ L+ L
Sbjct: 329 FKDMQNKGLSPNPVTYGTLIDGLFRVGREEDAFKIHKHML-KHGCEPSFEVYRALMTWLC 387
Query: 526 GARRLEEAMNL-------LRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+R+ +A +L LR + + E FV+ G VE A
Sbjct: 388 RKKRVSQAFSLYLEYLKNLRGREDNSINALEECFVR-----GEVEQA 429
>gi|224088126|ref|XP_002308333.1| predicted protein [Populus trichocarpa]
gi|222854309|gb|EEE91856.1| predicted protein [Populus trichocarpa]
Length = 1048
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 7/396 (1%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW I LE I+ + V L+ ++ AL FF WVG+ +G+ T TYN +
Sbjct: 645 DWP-IIQDALEKCTIQFTPELVAETLRNCGMHGNAALHFFAWVGKQNGFCQTTETYNMAM 703
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V R + + ++ EM++ G+ + DT+ + Q+ + + E A+K+F M
Sbjct: 704 KVSGRGKDFKHMRSLFYEMRRRGFLIPPDTWAIMIMQYGRTGLTEIALKIFGEMKASGCN 763
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P+ L+ + + ++ + G+ K + L ++G+ EA
Sbjct: 764 PNDSTYKYLIIFLCGRKGRKVDEAIKIFREMIRAGHVPDKELVGTYLCCLCEVGKLLEAR 823
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
K + ++ AGF +YS I LC+AG E+A +++D++ D T L+ G
Sbjct: 824 KSVDSLCKAGFTVP-ASYSLYIRALCRAGMLEEALSLVDQVSTEKTTLDRYTHASLVHGL 882
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
++ AL M + + + LI F +K + A ++ E +++ P
Sbjct: 883 LQKGRLEEALAKVDSMKQVGINPTVHVYTSLIVHFFREKLASKALEIF-ESMKQEGCEPT 941
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS 573
T+ LI + + EA N+ +K + P + + ++S + E L+ LS
Sbjct: 942 IVTYSALIRGYMDTENVIEAWNVFHSLKTKGPAPDFKTYSMFLSCLCRAGKSEEALQLLS 1001
Query: 574 ----VKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
PS+ + VF EG+ A+ +L K
Sbjct: 1002 DMVDNGIVPSNVNFRTVFFGLNREGKQSLAQTVLQK 1037
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 158/362 (43%), Gaps = 10/362 (2%)
Query: 178 KKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT 237
+K L A G + E + V + +V + + ++L+ + +L V
Sbjct: 116 QKEGSLLAFGDIKVGALNETDVSAVVHEITGIVRAENCTASMEERLDKVGFQLEPEIVEK 175
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL--ARHESVRDFWNVVEEMKKE 295
VLK P A FF WV G+ H T TYN +L AR SV D ++EEM+K
Sbjct: 176 VLKRCYKVPHLAYRFFNWVKTKDGFCHTTKTYNTMLYTAGEAREFSVVDV--LLEEMEKY 233
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
E DI T+ + +Q+ K +++ A+ + E M +P V+ + L S+ ++
Sbjct: 234 SCERDIKTWTILIQQYGKAKLVGKALLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIA 293
Query: 356 L-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
L +++ + E N S+Y + L K G + + M P++ + V
Sbjct: 294 LEIYKEMVQREMEPNL---SLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCV 350
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ C AGR +A ++ +++ D + L++G AN + AL M K++
Sbjct: 351 LKSYCVAGRIREALELIRDLKNKEIQLDYEVSETLVKGLSRANRIADALEIVEIMKRKDF 410
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D + ++ING+L + ++ A L M E L P +T+ L++ L + ++
Sbjct: 411 -VDGKVYGIIINGYLRRNELSKALDLFQSMKEFGHL-PTTSTYTELMQHLFRSNEYQKCC 468
Query: 535 NL 536
L
Sbjct: 469 EL 470
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 94/470 (20%), Positives = 191/470 (40%), Gaps = 71/470 (15%)
Query: 72 LILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV 131
++ A + + +E +L+++ +L E V VL++ P A FFNWV K F ++
Sbjct: 147 IVRAENCTASMEERLDKVGFQLEPEIVEKVLKRCYKVPHLAYRFFNWVKTKDGFCHTTKT 206
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD 191
Y+ ML V L M++ C + +T+ ++ KAK + H+
Sbjct: 207 YNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKALLV---HE 263
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALG 251
M K +V + +V L S D G+ L + KE+ ++
Sbjct: 264 KMRKSGCEPDVE--VYEVTLHSLCDAGKGE------------IALEIYKEMVQREMEP-- 307
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
N Y +L LA+ V +V ++M + + D ++ + + +
Sbjct: 308 -------------NLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSY 354
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
+ +A++L I + N ++ L + V
Sbjct: 355 CVAGRIREALEL----------------------IRDLKNKEIQLDYEV----------- 381
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
S+++ G+ RA R +A ++++ MK F D Y +I G + A ++
Sbjct: 382 SETLVKGLSRA----NRIADALEIVEIMKRKDF-VDGKVYGIIINGYLRRNELSKALDLF 436
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+E G +P T+T L+Q +NE + + +M+E+ + D+ + ++ G + Q
Sbjct: 437 QSMKEFGHLPTTSTYTELMQHLFRSNEYQKCCELYDEMLERGVEIDSVAVMAIVAGHVRQ 496
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
++ A+++ E +E ++P ++ I++L R +E + +L M+
Sbjct: 497 DHISEAWEVF-ETMEDKGIKPTWKSYSIFIKELCKVLRTDEIIKVLGKMQ 545
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 99/239 (41%), Gaps = 39/239 (16%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
GF TY+ +++ +A F +L+EME+ C DIKTWTILIQ + A V +A
Sbjct: 199 GFCHTTKTYNTMLYTAGEAREFSVVDVLLEEMEKYSCERDIKTWTILIQQYGKAKLVGKA 258
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
LL KM + + D ++ +V ++ + A ++ EM+++ + P + +K L+
Sbjct: 259 LLVHEKMRKSGCEPDVEVYEVTLHSLCDAGKGEIALEIYKEMVQR-EMEPNLSLYKMLLN 317
Query: 523 KLLG-----------------------------------ARRLEEAMNLLRLMKKQNYP- 546
L A R+ EA+ L+R +K +
Sbjct: 318 CLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIREALELIRDLKNKEIQL 377
Query: 547 --PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
E V+ +S+ + DA E ++ + K++ Y + + +A DL
Sbjct: 378 DYEVSETLVKGLSRANRIADALEIVEIMKRKDFVDGKVYGIIINGYLRRNELSKALDLF 436
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 121/287 (42%), Gaps = 26/287 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+++ P+ ++Y ++L L + M E + ++ +L A +
Sbjct: 302 QREMEPNLSLYKMLLNCLAKSGDVSAVQSVADDMIRVSQIPEHDVHVCVLKSYCVAGRIR 361
Query: 182 DLAALNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+ AL D KEI +D V++TLV G ++I LE ++I +FV
Sbjct: 362 E--ALELIRDLKNKEIQLDYEVSETLVK---GLSRANRIADALEIVEIMKRKDFV----- 411
Query: 241 ELRIYPV------------KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
+ ++Y + KAL F+ + E G+ T TY +++ L R + +
Sbjct: 412 DGKVYGIIINGYLRRNELSKALDLFQSMKEF-GHLPTTSTYTELMQHLFRSNEYQKCCEL 470
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+EM + G E+D + I + + +A ++FE M D KP+ + S+ ++ +
Sbjct: 471 YDEMLERGVEIDSVAVMAIVAGHVRQDHISEAWEVFETMEDKGIKPTWKSYSIFIKELCK 530
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ D + +V K ++ + +++ + + + G D K+
Sbjct: 531 VLRTD--EIIKVLGKMQASKMFICDEIFEWVISCMERKGEMDNIRKV 575
>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 1136
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 160/379 (42%), Gaps = 12/379 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SGY +TYN +L + + +++ MK +G + D+ TY + + +
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
L M P+ + L+ S N + + ++ N+ S G S + ++
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFS--NEGKVLIASQLLNEMLSFGLSPNHVTFN 377
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ G F EA KM M+ G P ++Y ++ GLCK F+ A M+ N
Sbjct: 378 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 438 G-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G C+ I T+T +I G C +D A++ +M + D D LINGF R
Sbjct: 438 GVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 496
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A K +V I +V L P + TLI L+EA+ + M + + F V
Sbjct: 497 A-KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 555
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG---RHYEAKDLLYKCPHH 609
+ K G V +A EF++ ++ P++ ++ + + N G + + D + K HH
Sbjct: 556 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 615
Query: 610 IRQDSKISLLFGSAKSNKV 628
+ SLL G K +
Sbjct: 616 PTFFTYGSLLKGLCKGGHL 634
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 121/245 (49%), Gaps = 15/245 (6%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R + + M++D++++F M + PSV C+ +L S+ + D+ + + L
Sbjct: 171 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK-SGEDVSV-------WSFLK 222
Query: 369 NSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
L + + ++ + L G F+++ +M+ M+ +G+ P +TY+ V+ CK G
Sbjct: 223 EMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKG 282
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
RF+ A +LD M+ G D+ T+ +LI C +N + + L M ++ + +
Sbjct: 283 RFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
LINGF ++ +V A +LL EM+ L P TF LI+ + +EA+ + +M+
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEA 401
Query: 543 QNYPP 547
+ P
Sbjct: 402 KGLTP 406
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 175/449 (38%), Gaps = 72/449 (16%)
Query: 118 WVCDKKQFRPSSTVYSLMLRNLVNK---DSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
++ + K PS Y ++L L D + F++ RMK + + TY ++ L
Sbjct: 397 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM---RMKRNGVCVGRITYTGMIDGL 453
Query: 175 KKAKKASDLAALNQFHDGMV---KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS 231
K N F D V E++ D + +V + K+G+
Sbjct: 454 CK----------NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR---------- 493
Query: 232 DNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
KE+ RIY V G N I Y+ ++ R +++ +
Sbjct: 494 ----FKTAKEIVCRIYRV-------------GLSPNGIIYSTLIYNCCRMGCLKEAIRIY 536
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQ-DCSLLLRSIS 347
E M EG+ D T+ + K + +A + M DG +V DC I+
Sbjct: 537 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL-----IN 591
Query: 348 SINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
N GL F V ++ +G+ + Y + + L K G EAEK +K++
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D + Y+ ++ +CK+G A ++ EM + +PD T+T LI G C + A+L F
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL-F 710
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYK--------LLVEMIEKVRLRPWQATFK 518
AK E +VL N + V+G +K E ++ + P T
Sbjct: 711 AKEAEARG-------NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 763
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I+ ++E+ +LL M QN P
Sbjct: 764 AMIDGYSRMGKIEKTNDLLPEMGNQNGGP 792
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
SVYD + R + G ++ ++ + M GF P T + ++ + K+G + L E
Sbjct: 164 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + PD+ T+ ILI CA +++ KM + Y + +++ + + R
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A +LL M K + T+ LI L + R+ + LLR M+K+ P +
Sbjct: 284 FKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 342
Query: 554 QYISKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
I+ F G V AS+ L + LS P+ + + + +EG EA + Y
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 397
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
VG H + TY +L+ L + +R+ ++ + +D Y + K
Sbjct: 612 VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL-SKS 374
+ AV LF M+ P + L+ + + ++F A + E+ GN L +K
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF--AKEAEARGNVLPNKV 725
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G++ + M N G PD +T + +I G + G+ E ++L EM
Sbjct: 726 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 785
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
P++ T+ IL+ G+ +V + L + ++ D L+ G +
Sbjct: 786 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 845
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
K+L I + + + TF LI K + A +L+++M
Sbjct: 846 EIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 890
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 144/362 (39%), Gaps = 27/362 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDTY 304
+AL F ++ E G + ++Y +L L ++ + R F+ MK+ G + TY
Sbjct: 391 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRNGVCVGRITY 446
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN-- 362
+ K +++AV L M P + S L+ + F+ A
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR------FKTAKEI 500
Query: 363 --KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ +G S + +Y + ++G EA ++ +AM G D+ T++ ++ LCK
Sbjct: 501 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 560
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
AG+ +A + M +G +P+ ++ LI G+ + E +A F +M + +
Sbjct: 561 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 620
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+ G + A K L + + V + TL+ + + L +A++L M
Sbjct: 621 YGSLLKGLCKGGHLREAEKFL-KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 679
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNE 593
+++ P + IS G + L KE P+ Y + F
Sbjct: 680 VQRSILPDSYTYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 737
Query: 594 GR 595
G+
Sbjct: 738 GQ 739
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 125/293 (42%), Gaps = 3/293 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA +FR ++ G+ + +T N ++ +R + +++ EM + ++ TY +
Sbjct: 741 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 800
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K + + + L+ ++ P C L+ I N ++GL ++ +
Sbjct: 801 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL--KILKAFICR 858
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + ++ + G + A ++K M + G D T ++ L + RF+++
Sbjct: 859 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 918
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL EM + G P+ + + LI G C ++ A + +M+ ++
Sbjct: 919 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 978
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ + A LL+ + K++L P A+F TL+ + EA+ L +M
Sbjct: 979 LAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 1030
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RAL K G+ DEA +++ M P +++ ++ CK G +A + M G
Sbjct: 977 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 1036
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV-NGAYK 499
D+ ++ +LI G CA ++ A + +M + A+A LI G L+++ +GA
Sbjct: 1037 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1096
Query: 500 LLVEMIEK 507
+L +++ +
Sbjct: 1097 ILKDLLAR 1104
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 5/204 (2%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD +T ++ G+C++ E +L G D T+ +LI CA E++ A
Sbjct: 824 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 883
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
M D D D +++ R + +L EM K + P + LI
Sbjct: 884 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLIN 942
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK-ALSVKEYP 578
L ++ A + M P V+ ++K G ++A+ L+ L +K P
Sbjct: 943 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 1002
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+ A++ + G EA +L
Sbjct: 1003 TIASFTTLMHLCCKNGNVIEALEL 1026
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 165/412 (40%), Gaps = 47/412 (11%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKE---GYEMDIDTYIKISRQFQKFRMMEDA 320
+ ++YN +L L R + ++ M E + +Y + R R A
Sbjct: 54 RDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQA 113
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L M D +P V L+R + + D+ + N+ G + VY +
Sbjct: 114 VGLLRSMQDCGVRPDVVTYGTLIRGLC--DAADVDTAVELLNEMCESGIEPNVVVYSCLL 171
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K GR++ K+ + M G EPD + Y+ +I LC+ G+ + A V+D M E G
Sbjct: 172 HGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLE 231
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ +LI C V AL M EK D + LI G S ++ A L
Sbjct: 232 PNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMAL 291
Query: 501 LVEMIE-KVRLRPWQATFKT-----------------------------------LIEKL 524
L EM++ + R+RP TF + LI L
Sbjct: 292 LEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGL 351
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG---TVEDASEFLKALSVKEY-PSS 580
L ++++AM L+ M P + I+ F VE A +L + + P
Sbjct: 352 LRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEP 411
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI--SLLFGSAKSNKVTI 630
Y+ + ++ ++G +A+DL + + + D+ +++ G+ KS + I
Sbjct: 412 VHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKI 463
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 155/361 (42%), Gaps = 9/361 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+G R + + G + + +TY ++R L V ++ EM + G E ++ Y +
Sbjct: 112 QAVGLLRSM-QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K E K+FE M +P V + L+ S+ + + RV +
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLC--RHGKVKKAARVMDMMTER 228
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y+ + ++ K G EA + K M G +PD +TY+ +I GL ++A
Sbjct: 229 GLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEA 288
Query: 428 CNVLDEM--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+L+EM E PD+ T+ +I G C + +AL A M E + ++LI
Sbjct: 289 MALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLI 348
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G L +V A +L+ EM L+P T+ LI R++E A + L M+ Q
Sbjct: 349 GGLLRVHKVKKAMELMDEMASS-GLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGM 407
Query: 546 PPFPE---PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
P P P ++ + G + A + + +AAY + F G A++
Sbjct: 408 EPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEF 467
Query: 603 L 603
L
Sbjct: 468 L 468
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 109/526 (20%), Positives = 212/526 (40%), Gaps = 71/526 (13%)
Query: 96 ESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRM 155
++ +++LR + ++P AS RP++ Y+ ++R L Q LR M
Sbjct: 73 DAALFLLRVMSHEPRLAS------------RPNAISYTTLMRALCADRRAAQAVGLLRSM 120
Query: 156 KEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSD 214
++ + TY +++ G+ A + + LN+ + ++ + V L+ +
Sbjct: 121 QDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVV--VYSCLLHGYCKTG 178
Query: 215 WDDKIGKKLEDMK---IELSDNFVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITY 269
+ +GK E+M IE D + T L + R VK + G + N +TY
Sbjct: 179 RWESVGKVFEEMSGRGIE-PDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTY 237
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N ++ + + SVR+ ++ + M ++G + D+ TY + M++A+ L E MM
Sbjct: 238 NVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQ 297
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
G + PDL ++ + L K+G
Sbjct: 298 GETR----------------VRPDL-------------------MTFNSVIHGLCKIGWM 322
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+A ++ M G + + ++ +I GL + + + A ++DEM +G PD T++IL
Sbjct: 323 RQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSIL 382
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I G C +V+RA ++M + + + L+ Q + A L EM +
Sbjct: 383 INGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRNCK 442
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDAS 566
L A + T+I + + A L+ M + P + + +K G + A
Sbjct: 443 LD--AAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAE 500
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEG---------RHYEAKDL 602
LK ++ + P A + + + + +G R AKD+
Sbjct: 501 RVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDV 546
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%), Gaps = 7/238 (2%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
R + +G + N + +N ++ L R V+ +++EM G + D TY + F
Sbjct: 328 VRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFC 387
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS-- 370
K R +E A M +P LL+++ D G++ + + + + +
Sbjct: 388 KMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMC-----DQGMMGQARDLFNEMDRNCK 442
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + Y + K G AE+ +K M + G PD +TYS I K+G A V
Sbjct: 443 LDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERV 502
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
L +M +G +PD+ + LIQG+ A + ++ L +M K+ D ++ ++
Sbjct: 503 LKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIISTIVTSL 560
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 127/283 (44%), Gaps = 4/283 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T+N +L R +++ + + M KE + + I I F+ ++ E+A+ ++
Sbjct: 326 DAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQTVVSYNILIKGLFENGKV-EEAISIW 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E + +P +L+ + N L ++ + E L Y + L
Sbjct: 385 ELLCKKGCRPESTTYGVLIHGLCK--NGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLC 442
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR DEA ++ M G++ D + +I G +A + EDA N EME GC P I
Sbjct: 443 KEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIV 502
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
++ LI+G C A A +M+EK + D +L++G +K++ A L +
Sbjct: 503 SYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQA 562
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++K +P + L+ L +LE+A+ L MK+ P
Sbjct: 563 LDK-GFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVP 604
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 179/389 (46%), Gaps = 29/389 (7%)
Query: 227 KIELSDNFVLTVLKELRIYPV--KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
K ++ LTV+K + KAL F+ + + G K +YN +L
Sbjct: 75 KCPCKEDVALTVIKAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNE--- 131
Query: 285 FWNVVEEMKKEGYEMDI----DTY---IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
W+ E + MD+ TY IKIS + Q+ +E A+ L ++M KP V
Sbjct: 132 -WDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQ---IEKAISLLDWMWSQNLKPDVF 187
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM- 396
L+ + + DL +V ++ G + Y+ + K G +D+ +++
Sbjct: 188 SYGTLINGMVKVG--DLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWE 245
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ +K+ P+ +TY+ +I GLCK GRF+++ + + M +N D+ T++ LI G C A
Sbjct: 246 RLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEA 305
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+D A+ + +++E + DA + ++NGF ++ +++L + M K + +
Sbjct: 306 GNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVM-GKENCQT-VVS 363
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALS 573
+ LI+ L ++EEA+++ L+ K+ P + + + K G + A + K
Sbjct: 364 YNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFK--E 421
Query: 574 VKEYPS---SAAYLQVFESFFNEGRHYEA 599
++ P + AY + + EGR EA
Sbjct: 422 AEDGPGKLDAYAYSSMVDGLCKEGRMDEA 450
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 124/291 (42%), Gaps = 24/291 (8%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL F+ + G K + Y+ ++ L + + + ++V +M K GY++D +
Sbjct: 414 KALKIFKEAEDGPG-KLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPL 472
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F + +EDA+ F M P++ + L++ + R + Y +
Sbjct: 473 INGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAE--------RFSEAYSFV 524
Query: 368 GNSLSKS----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
L K + DG L + + + A + + + GF+PD Y+ ++ G
Sbjct: 525 KEMLEKEWKPDMITCSLLMDG----LCQEKKIEMALNLWQQALDKGFKPDITMYNILMHG 580
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
LC + EDA + M+ + C+P++ T L++G + ++A + +++ D
Sbjct: 581 LCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPD 640
Query: 478 ADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
++ I G S R++ A + L + + + L P T+ L+ + R
Sbjct: 641 IISYNITIKGLCSCSRISDAIEFLNDALNRGIL-PTAVTWNILVRAAVNFR 690
>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Cucumis sativus]
Length = 942
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 168/371 (45%), Gaps = 25/371 (6%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR---H 279
L ++ S+ + VL+ LR+ P +L FF+ + ++ + +Y I+ +L+R +
Sbjct: 89 LANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHILSRARMY 148
Query: 280 ESVRDFWNVVEEMKKEGYEMDI--DTYIKISRQFQ--------------KFRMMEDAVKL 323
+ VR + N + + K Y D + + R+F + M + A+ +
Sbjct: 149 KEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKFALCV 208
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F+ M PS++ C+ LL ++ + N + V + +LG Y + A
Sbjct: 209 FDNMGKCGRVPSLRSCNSLLSNL--VQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAY 266
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K GR DEA +K M+ + EP+ +TY+ +I G G A VL M E G +
Sbjct: 267 CKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENS 326
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T+T+LI+G+C ++++A MMEKN D + VLI+ + + RV+ A ++
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVE 563
M+ KV L+ +LI + +A +L MK N P + + F E
Sbjct: 387 ML-KVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQE 445
Query: 564 DASEFLKALSV 574
D F+KA +
Sbjct: 446 D---FIKAFKL 453
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 135/330 (40%), Gaps = 35/330 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G +T YN ++ + R E ++ ++ EMK ++ TY + + MM
Sbjct: 598 ERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMM 657
Query: 318 EDAVKLFEFMMDGPYKPSV----------------QDCSLLLRSISSINN---------- 351
+ A + M+D P++ + +L+L I+ I+
Sbjct: 658 DKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVEL 717
Query: 352 PDLGL----VFRVANKYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
P L ++ + + S+ S VY+ L K D+ +++ + GF
Sbjct: 718 PKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGF 777
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PDN TY +I G+ +A + D+M G +P+I + LI G C + +DRA
Sbjct: 778 CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARR 837
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F K+ K + LI+G+ R A +L +M E+ + P T+ TLI L
Sbjct: 838 LFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREE-GICPSSITYSTLIHGL 896
Query: 525 LGARRLEEAMNLL-RLMKKQNYPPFPEPFV 553
+ E+++ LL +MK +P V
Sbjct: 897 YMEGKSEQSVGLLNEMMKAGKGSSVMDPLV 926
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 119/526 (22%), Positives = 204/526 (38%), Gaps = 55/526 (10%)
Query: 84 NKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
+ L LS ++E + VLR L +P+ + FF + +FRP + Y ++ L
Sbjct: 87 DALANLSFSFSNELMDLVLRNLRLNPDASLEFFKLASKQPKFRPDVSSYCKIVHIL---- 142
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
+ RM Y E YL+ L VL K N +
Sbjct: 143 -------SRARM-----YKEVRVYLNELVVLCK----------NNY-------------- 166
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK 263
+ + WD+ + E + +L V E + AL F +G+ G
Sbjct: 167 ------IASAVWDELVSVYREFSFSPTVFDMILKVFAEKGMTKF-ALCVFDNMGK-CGRV 218
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ + N +L L ++ V E+M G DI +Y + + K +++A
Sbjct: 219 PSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNF 278
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M +P+V + L+ S+ D+ +V G + Y + +
Sbjct: 279 VKEMERSCCEPNVVTYNSLIDGYVSLG--DVCGAKKVLALMSEKGIPENSRTYTLLIKGY 336
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K G+ ++AEK++ M D Y +I C AGR +DA + D M + G +
Sbjct: 337 CKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNT 396
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
LI G+C V++A M + N D+ + L++GF Q+ A+KL E
Sbjct: 397 VICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDE 456
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---G 560
M K + T+ TL++ L +E A+++ LM K+ P + + F G
Sbjct: 457 MHNK-GVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVG 515
Query: 561 TVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
T + A K ALS S Y + F + +A+++ K
Sbjct: 516 TFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 2/245 (0%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K ++ YN +L + E + + +EM +G + TY + + +E A+
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
++ M P+ LL + + D ++ + S G + S ++Y+ +
Sbjct: 488 IWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMM--IWKDALSKGFTKSITLYNTMICG 545
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K+ + +A+++ MK GF PD ITY +I G CK G +A + D E +G
Sbjct: 546 FCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSS 605
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ + LI G + E+ + A+M + + LI G+ + ++ AY
Sbjct: 606 TEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYF 665
Query: 503 EMIEK 507
+MI+K
Sbjct: 666 KMIDK 670
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 95/493 (19%), Positives = 193/493 (39%), Gaps = 26/493 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K +S Y+L+++ + ++Q + M E + +++E Y ++ A +
Sbjct: 319 EKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVD 378
Query: 182 DLAALNQFHDGMVK-EIAMDNV-AKTLVDVVLGSDWDDKIGKKLEDMKI--ELSDNFVLT 237
D AL + D M+K + M+ V +L++ +K + L MK D++
Sbjct: 379 D--AL-RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYN 435
Query: 238 VLKELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVL---ARHESVRDFWNVVEEM 292
L + + F+ E + G +TYN +L+ L E WN+ M
Sbjct: 436 TLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNL---M 492
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K G + TY + F K + A+ +++ + + S+ + ++ +
Sbjct: 493 HKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK- 551
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
L + K + LG + Y + K+G EA K+ + G Y+
Sbjct: 552 -LVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYN 610
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I G+ ++ + +L EM+ P++ T+ LI G C +D+A + KM++K
Sbjct: 611 SLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDK 670
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ + +++ +++ A +L ++ + + P A ++ R LE
Sbjct: 671 GIAPNIIIGSKIVSSLYRHGKIDEANLILHQIAD---IDPIAAHAHSVELPKSDLRHLET 727
Query: 533 AMNLLRLMKKQNYPPFPEPFVQYISKFG-----TVEDASEFLKALSVKEY-PSSAAYLQV 586
+ KK P V I+ G ++D L L +K + P + Y +
Sbjct: 728 QKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSL 787
Query: 587 FESFFNEGRHYEA 599
+ G+ EA
Sbjct: 788 IHACSAVGKVNEA 800
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TYN +L L + + + ++ E+M ++G + +Y + + M+ A +F
Sbjct: 432 NVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVF 491
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M++ KP++ S+L+ D F + ++ + S + I L
Sbjct: 492 VEMLEKGLKPNLITYSVLMDGY--FKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLC 549
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR E++ +K + GF P +TY+ +I G K G A V EM + G P++
Sbjct: 550 KAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVF 609
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G C +N +D AL +M K + D + LI+GF + + A +LL E+
Sbjct: 610 TYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSEL 669
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGT 561
++V L P + + ++I + +E A++L + M + P + + IS K G
Sbjct: 670 -QEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728
Query: 562 VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ASE + + L+ P Y + N+G+ A+ +L
Sbjct: 729 LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKIL 771
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 6/229 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N TY ++ + ++ V++EMK +G E+D+ Y + F + M +A
Sbjct: 603 GVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNA 662
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSVYDG 378
+L + + P+ S ++ + N + L R+ N+ G +Y
Sbjct: 663 SQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINE----GIPCDLQIYTT 718
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K G+ A ++ M G PD ITYS +I GLC G+ E+A +L++M+
Sbjct: 719 LISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKC 778
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
P + + LI GH + A +M++K D D+L+NG
Sbjct: 779 MTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNG 827
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 115/263 (43%), Gaps = 3/263 (1%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G+ +TYN I+ + SV V EM K G ++ TY + F K M+
Sbjct: 566 QEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMD 625
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+K+ + M + + V L+ D+ ++ ++ + +G S +K VY
Sbjct: 626 LALKVMDEMKNKGIELDVTVYCALIDGFC--RKGDMVNASQLLSELQEVGLSPNKVVYSS 683
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ KL + A + K M N G D Y+ +I GL K G+ A + EM G
Sbjct: 684 MISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKG 743
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+PD+ T+++LI G C +++ A M K + + LI G + + A+
Sbjct: 744 IMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAF 803
Query: 499 KLLVEMIEKVRLRPWQATFKTLI 521
+L EM++K L P T+ L+
Sbjct: 804 RLHNEMLDK-GLVPDDTTYDILV 825
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 109/566 (19%), Positives = 222/566 (39%), Gaps = 77/566 (13%)
Query: 93 LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML-------------RNL 139
LT + L NDP+ A ++F W K+ S ++L RNL
Sbjct: 62 LTQTQYIDTLLNHQNDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNL 121
Query: 140 VNKDSLKQFW----VTLRRMKEDHCYIEEET----YLSILGVLKKAKKASDLAALNQFHD 191
+N+ + + V + R+ E ++ E+ + +L K K+ +D A++ F+
Sbjct: 122 LNRFASDDWGPVPSVVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRIND--AVDCFNS 179
Query: 192 GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS------DNFVLTVLKELRIY 245
+ K+I T++++ L + + ++ D+ +++ D ++V+ +
Sbjct: 180 LIEKDIV---PCLTVMNIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMR 236
Query: 246 PVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
K A G+FR ++ G + + Y+ ++ + + ++ EM+ +G+
Sbjct: 237 EGKLEEAEGWFRE-AKNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEV 295
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+ ++ K M +AVK+ M+ +V + L++ DL + +
Sbjct: 296 IFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCK--QGDLDSALELFD 353
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP---------------- 406
K G + Y I K G D+A ++ MKN P
Sbjct: 354 KMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKAR 413
Query: 407 ------------------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+ TY+ ++ LCK G+ +AC++ ++M G P + ++
Sbjct: 414 SPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNN 473
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I GHC ++D A F +M+EK + VL++G+ + A+ L M
Sbjct: 474 MILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM-RGE 532
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA 565
+ P T +I L A R E+ + L+ + ++ + P + I F G+V A
Sbjct: 533 NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSA 592
Query: 566 -SEFLKALSVKEYPSSAAYLQVFESF 590
+ + + + P+ Y + F
Sbjct: 593 LAVYTEMCKIGVSPNVFTYTNLINGF 618
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 145/333 (43%), Gaps = 16/333 (4%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N L L ++ +R+ +V +M +G + D T + R + +E+A F +
Sbjct: 193 NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKN 252
Query: 330 GPYKPSVQDCSLLLRSISSINNPD----LGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ + S+++ ++ PD LGL+ + +K G + ++ + K
Sbjct: 253 KGVELDARAYSIVIEAVCK--KPDSVAALGLLREMRDK----GWVPHEVIFTRVIGVCMK 306
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G+ EA K+ M + G + + + ++ G CK G + A + D+M ENG P+ T
Sbjct: 307 QGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVT 366
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ ++I+ C +D+A + +M K+ ++ LI G+L + A KL E +
Sbjct: 367 YAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV 426
Query: 506 EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTV 562
+ T+ +L+ L ++ EA ++ M ++ P + I + G +
Sbjct: 427 ACGIANVF--TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDM 484
Query: 563 EDASE-FLKALSVKEYPSSAAYLQVFESFFNEG 594
+ A+ F++ L P+ Y + + +F +G
Sbjct: 485 DSANGVFVEMLEKGLKPNLITYSVLMDGYFKKG 517
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 2/246 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +TYN ++ + V ++ M + G DI +Y + F K +MM++A
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEA 266
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L + M P+V S L+ + + + ++ ++ G + Y I
Sbjct: 267 MELLKEMHHKQIIPNVVTYSSLIDGLCK--SGKISYALKLVDEMHDRGQPPNIVTYSSIL 324
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K + D A ++ MKN G +P+ TY+ +I GLC++G+ EDA V +++ G
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ T+T++IQG C D AL +KM + +A +++I + A KL
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444
Query: 501 LVEMIE 506
L EMIE
Sbjct: 445 LCEMIE 450
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 21/301 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKK----------EGYEMDIDTYIKISRQ 310
GYK NTIT N +++ L + + D +V ++K E D+ T+ +
Sbjct: 127 GYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDG 186
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS---ISSINNPDLGLVFRVANKYESL 367
F K +++A + MM KP V + L+ + +N + N L
Sbjct: 187 FCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAK-----SIFNTMAQL 241
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y + K+ DEA +++K M + P+ +TYS +I GLCK+G+ A
Sbjct: 242 GVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYA 301
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++DEM + G P+I T++ ++ C ++VD A+ +M + + +LI G
Sbjct: 302 LKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKG 361
Query: 488 FLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
++ A K+ +++ K L + T+ +I+ +EA+ LL M+
Sbjct: 362 LCQSGKLEDARKVFEDLLVKGHNLNVY--TYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419
Query: 547 P 547
P
Sbjct: 420 P 420
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 111/255 (43%), Gaps = 15/255 (5%)
Query: 304 YIKISRQFQKFRMMEDAVKLFE-FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
Y S F ++DAV LF + P P+++ +L + S V ++
Sbjct: 30 YFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKS---KHYHTVLYLSQ 86
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL---- 418
K E G + + + + +LG A ++ + G++P+ IT + +I GL
Sbjct: 87 KMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNG 146
Query: 419 ------CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
C G+ +DA ++ ++M PD+ T+TIL+ G C V A A MM +
Sbjct: 147 KIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQ 206
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ L++G+ K+VN A K + + ++ + P ++ LI + ++E
Sbjct: 207 GIKPGVVTYNSLMDGYFLVKQVNKA-KSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265
Query: 533 AMNLLRLMKKQNYPP 547
AM LL+ M + P
Sbjct: 266 AMELLKEMHHKQIIP 280
>gi|255540825|ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550592|gb|EEF52079.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 754
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/388 (24%), Positives = 166/388 (42%), Gaps = 10/388 (2%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
I + LE K +LS N V KE R ++L F+++ K N Y I+ +L
Sbjct: 93 IARCLEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLL 152
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + + EEM G + +Y + + + E +++L E M PS+
Sbjct: 153 GREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMKKEKVTPSI 212
Query: 337 QDCSLLLRSISSINNPDLGLVFRVAN-KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ ++ S + GL+ A ++E + + Y+ + A G DEAE +
Sbjct: 213 LTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDII--TYNTLLNACANRGLGDEAEMV 270
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M G PD TY ++ K + E +L EME +G +PDI ++ +L++ + +
Sbjct: 271 FRTMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYAS 330
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
++ A+ F +M E +A +L+N + R + +L +EM + P
Sbjct: 331 KGDIRHAMGVFRQMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEM-KVSNTEPDVG 389
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL 572
T+ LIE +E + L M ++N P E + K G EDA + L +
Sbjct: 390 TYNVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHM 449
Query: 573 SVKE-YPSSAAYLQVFESFFNEGRHYEA 599
K PS+ AY V E++ + EA
Sbjct: 450 DEKGIVPSTKAYTGVIEAYGQAASYEEA 477
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/400 (22%), Positives = 155/400 (38%), Gaps = 46/400 (11%)
Query: 249 ALGFFRWVG--------EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
A G W G H G + + ITYN +L A + V M + G D
Sbjct: 223 ARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPD 282
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFR 359
I TY + F K +E +L + M P + ++LL + +S + + VFR
Sbjct: 283 ITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKGDIRHAMGVFR 342
Query: 360 VANKYESLGNSLSKSV----------YD------------------GIHRALTKL----G 387
+ + N+++ S+ YD G + L ++ G
Sbjct: 343 QMQEARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTYNVLIEVFGEGG 402
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
F E + M EP+ TY +I+ K G EDA +L M+E G +P K +T
Sbjct: 403 YFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLHEDAKKILLHMDEKGIVPSTKAYT 462
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+I+ + A + AL+ F M E + + LIN F + ++ +M E
Sbjct: 463 GVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYNSLINMFARGGLYKESEAIMWKMGES 522
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
R + +F +IE + EEA+ ++K + P F +S + G V++
Sbjct: 523 GVARD-RDSFNGVIEGYRQGGQFEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDE 581
Query: 565 ASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ E + + PS Y + + R +A ++L
Sbjct: 582 SEEQFREIRASGILPSVMCYCMMIAVYARSNRWDDAYEVL 621
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 77/384 (20%), Positives = 140/384 (36%), Gaps = 81/384 (21%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ ++V KL N EK S + P + Y+++L +K ++ R
Sbjct: 285 TYRNLVETFGKL-NKLEKVSELLKEMESSGNL-PDISSYNVLLEAYASKGDIRHAMGVFR 342
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD-NVAKTLVDVVLG 212
+M+E C TY +L + + D V+E+ ++ V+ T DV
Sbjct: 343 QMQEARCVPNAVTYSMLLNLYGGHGRYDD-----------VRELFLEMKVSNTEPDVG-- 389
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
+ N ++ V E + F V E+ + N TY G+
Sbjct: 390 ------------------TYNVLIEVFGEGGYFKEVVTLFHDMVEEN--VEPNMGTYEGL 429
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
+ + D ++ M ++G Y + + + E+A+ +F M +
Sbjct: 430 IYACGKGGLHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGS 489
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFR----VANKYESLGNSLSKSVYDGIHRALTKLGR 388
KP+V+ + L IN G +++ + K G + + ++G+ + G+
Sbjct: 490 KPTVETYNSL------INMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQ 543
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG-------------------------- 422
F+EA K ++ A F+PD T+ V+ C AG
Sbjct: 544 FEEAIKTYVELEKARFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSVMCYCM 603
Query: 423 ---------RFEDACNVLDEMEEN 437
R++DA VLDEM N
Sbjct: 604 MIAVYARSNRWDDAYEVLDEMVTN 627
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/397 (23%), Positives = 174/397 (43%), Gaps = 19/397 (4%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKK 179
D+ P Y+ +LR L + LK+ L R + CY + TY + I K++
Sbjct: 204 DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGV 263
Query: 180 ASDLAALNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV 238
+ L++ D G ++ NV L++ + D+ + L M V+T
Sbjct: 264 GQAMKLLDEMRDKGCKPDVVTYNV---LINGICKEGRLDEAIRFLNHMPSYGCQPNVIT- 319
Query: 239 LKELRIYPVKALGFFRWVGE--------HSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+ + + + G RW+ G + +T+N ++ L R + +V+E
Sbjct: 320 -HNIILRSMCSTG--RWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + G + +Y + K + ME A++ + M+ P + + LL ++
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
D+ + + N+ S G S Y+ + L+K+G+ D+A K++ MK G +PD IT
Sbjct: 437 KVDVAV--EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIIT 494
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
YS ++ GL + G+ ++A ++EE G P+ T+ ++ G C A + RA+ A M+
Sbjct: 495 YSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMV 554
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +LI G + A +LL E+ +
Sbjct: 555 ARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSR 591
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 150/346 (43%), Gaps = 10/346 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SG + ITYN ++ + + +++ M D+ TY I R +
Sbjct: 172 EDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKL 228
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A+++ + M P V ++L+ + + +G ++ ++ G Y+
Sbjct: 229 KEAMEVLDRQMQRECYPDVITYTILIEA--TCKESGVGQAMKLLDEMRDKGCKPDVVTYN 286
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K GR DEA + + M + G +P+ IT++ ++ +C GR+ DA L EM
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P + T+ ILI C + RA+ KM + ++ + L++ K++ A
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L M+ + P T+ TL+ L +++ A+ +L + + P + +
Sbjct: 407 IEYLDIMVSR-GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+SK G +DA + L + K P Y + EG+ EA
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEA 511
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 79/334 (23%), Positives = 130/334 (38%), Gaps = 45/334 (13%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R+ + +E+ K E M+ P + C+ L+R + RV E G
Sbjct: 118 RRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKT--WKATRVMEILEDSG 175
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+ + K G A +++ M PD +TY+ ++ LC +G+ ++A
Sbjct: 176 AVPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAM 232
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
VLD + C PD+ T+TILI+ C + V +A+ +M +K D +VLING
Sbjct: 233 EVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGI 292
Query: 489 LSQKRVNGAY-----------------------------------KLLVEMIEKVRLRPW 513
+ R++ A K L EMI K P
Sbjct: 293 CKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK-GCSPS 351
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLK 570
TF LI L + A+++L M + P P + + K +E A E+L
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 571 AL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ S YP Y + + +G+ A ++L
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEIL 445
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 108/265 (40%), Gaps = 37/265 (13%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L + G +E K ++ M G PD I + +I GLCK G+ A V++ +E++G +
Sbjct: 118 RRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAV 177
Query: 441 PDIKTWTILIQGHCAANEVDRAL---------------------LC-----------FAK 468
PD+ T+ +LI G+C E+ AL LC +
Sbjct: 178 PDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDR 237
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M++ D +LI + V A KLL EM +K +P T+ LI +
Sbjct: 238 QMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDK-GCKPDVVTYNVLINGICKEG 296
Query: 529 RLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQ 585
RL+EA+ L M P ++ + G DA +FL + K S
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 586 VFESFF-NEGRHYEAKDLLYKCPHH 609
+ +F +G A D+L K P H
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQH 381
>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
Length = 1274
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 12/377 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SGY +TYN +L + + +++ MK +G + D+ TY + + +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
L M P+ + L+ S N + + ++ N+ S G S + ++
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFS--NEGKVLIASQLLNEMLSFGLSPNHVTFN 337
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ G F EA KM M+ G P ++Y ++ GLCK F+ A M+ N
Sbjct: 338 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 397
Query: 438 G-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G C+ I T+T +I G C +D A++ +M + D D LINGF R
Sbjct: 398 GVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A K +V I +V L P + TLI L+EA+ + M + + F V
Sbjct: 457 A-KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG---RHYEAKDLLYKCPHH 609
+ K G V +A EF++ ++ P++ ++ + + N G + + D + K HH
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 610 IRQDSKISLLFGSAKSN 626
+ SLL G K
Sbjct: 576 PTFFTYGSLLKGLCKGG 592
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R + + M++D++++F M + PSV C+ +L S+ + D+ + + E L
Sbjct: 131 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK-SGEDVSVWSFLK---EMLK 186
Query: 369 NSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ V ++ + L G F+++ +M+ M+ +G+ P +TY+ V+ CK GRF+
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LD M+ G D+ T+ +LI C +N + + L M ++ + + LIN
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF ++ +V A +LL EM+ L P TF LI+ + +EA+ + +M+ +
Sbjct: 307 GFSNEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 547 P 547
P
Sbjct: 366 P 366
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 175/449 (38%), Gaps = 72/449 (16%)
Query: 118 WVCDKKQFRPSSTVYSLMLRNLVNK---DSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
++ + K PS Y ++L L D + F++ RMK + + TY ++ L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM---RMKRNGVCVGRITYTGMIDGL 413
Query: 175 KKAKKASDLAALNQFHDGMV---KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS 231
K N F D V E++ D + +V + K+G+
Sbjct: 414 CK----------NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR---------- 453
Query: 232 DNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
KE+ RIY V G N I Y+ ++ R +++ +
Sbjct: 454 ----FKTAKEIVCRIYRV-------------GLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQ-DCSLLLRSIS 347
E M EG+ D T+ + K + +A + M DG +V DC I+
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL-----IN 551
Query: 348 SINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
N GL F V ++ +G+ + Y + + L K G EAEK +K++
Sbjct: 552 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 611
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D + Y+ ++ +CK+G A ++ EM + +PD T+T LI G C + A+L F
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL-F 670
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYK--------LLVEMIEKVRLRPWQATFK 518
AK E +VL N + V+G +K E ++ + P T
Sbjct: 671 AKEAEARG-------NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I+ ++E+ +LL M QN P
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
SVYD + R + G ++ ++ + M GF P T + ++ + K+G + L E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + PD+ T+ ILI CA +++ KM + Y + +++ + + R
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A +LL M K + T+ LI L + R+ + LLR M+K+ P +
Sbjct: 244 FKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 554 QYISKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
I+ F G V AS+ L + LS P+ + + + +EG EA + Y
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
VG H + TY +L+ L + +R+ ++ + +D Y + K
Sbjct: 572 VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL-SKS 374
+ AV LF M+ P + L+ + + ++F A + E+ GN L +K
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF--AKEAEARGNVLPNKV 685
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G++ + M N G PD +T + +I G + G+ E ++L EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
P++ T+ IL+ G+ +V + L + ++ D L+ G +
Sbjct: 746 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
K+L I + + + TF LI K + A +L+++M
Sbjct: 806 EIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 142/354 (40%), Gaps = 48/354 (13%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A GF+ + + +G ITY G++ L ++ + + ++ EM K+G + DI TY +
Sbjct: 387 ARGFYMRM-KRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALI 445
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F K G +K + + ++ R ++RV G
Sbjct: 446 NGFCKV---------------GRFKTAKE---IVCR------------IYRV-------G 468
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S + +Y + ++G EA ++ +AM G D+ T++ ++ LCKAG+ +A
Sbjct: 469 LSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAE 528
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ M +G +P+ ++ LI G+ + E +A F +M + + L+ G
Sbjct: 529 EFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGL 588
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ A K L + + V + TL+ + + L +A++L M +++ P
Sbjct: 589 CKGGHLREAEKFL-KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 647
Query: 549 PEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNEGR 595
+ IS G + L KE P+ Y + F G+
Sbjct: 648 SYTYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQ 699
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 125/293 (42%), Gaps = 3/293 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA +FR ++ G+ + +T N ++ +R + +++ EM + ++ TY +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K + + + L+ ++ P C L+ I N ++GL ++ +
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL--KILKAFICR 818
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + ++ + G + A ++K M + G D T ++ L + RF+++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL EM + G P+ + + LI G C ++ A + +M+ ++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ + A LL+ + K++L P A+F TL+ + EA+ L +M
Sbjct: 939 LAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RAL K G+ DEA +++ M P +++ ++ CK G +A + M G
Sbjct: 937 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV-NGAYK 499
D+ ++ +LI G CA ++ A + +M + A+A LI G L+++ +GA
Sbjct: 997 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056
Query: 500 LLVEMIEK 507
+L +++ +
Sbjct: 1057 ILKDLLAR 1064
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 5/204 (2%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD +T ++ G+C++ E +L G D T+ +LI CA E++ A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
M D D D +++ R + +L EM K + P + LI
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLIN 902
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK-ALSVKEYP 578
L ++ A + M P V+ ++K G ++A+ L+ L +K P
Sbjct: 903 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+ A++ + G EA +L
Sbjct: 963 TIASFTTLMHLCCKNGNVIEALEL 986
>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
Length = 495
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 174/412 (42%), Gaps = 45/412 (10%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+++ V+ VL+ ++ P A F+W ++H TYN L L + + +
Sbjct: 3 TEDDVIHVLENIK-SPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFD 61
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + +I TY + R + A++L + M P+ ++L+ +
Sbjct: 62 DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNG 121
Query: 351 NPDLG--LVFRVANK-------YESLGNSLSKS-----------------------VYDG 378
D L R++++ Y L L K+ Y+G
Sbjct: 122 KVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNG 181
Query: 379 IHRALTKLGRFDEA----EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + GR ++A E+M++ K + PD +Y+ VI G CKA + A VL M
Sbjct: 182 LLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRM 241
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++GC P++ T+ L+ G C ++D A F M+E+N + A VLI G R+
Sbjct: 242 IKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRI 301
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A V+M+ + + P T+ LI L A ++E+A+ +L+ M P + +
Sbjct: 302 DKANDYFVDMLRR-GVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 555 YIS---KFGTVEDASEF----LKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
I K G +E A++ + + + K P S AY + + + EA
Sbjct: 361 VIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEA 412
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 171/444 (38%), Gaps = 57/444 (12%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T + V++VL + + P+ AS F W ++ F + Y+ L LV +
Sbjct: 3 TEDDVIHVLENIKS-PKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFD 61
Query: 154 RMKEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M C TY +L G+ AK + L L M+ + LV +
Sbjct: 62 DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTF--IVNMLVSCLCK 119
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLK-ELRIYPV-------KALGFFRWVGEHSGYKH 264
+ K+ E K LSD L + + Y + +AL F + E +
Sbjct: 120 ---NGKVDAAYELYK-RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEM-EENAVVP 174
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEM--KKEGYEM--DIDTYIKISRQFQKFRMMEDA 320
+ +TYNG+L R + ++EEM K+G ++ D+ +Y + F K R + A
Sbjct: 175 SLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTA 234
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD----------------LGLVFRV---- 360
+ M+ P+V + LL + D + + V
Sbjct: 235 RYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITG 294
Query: 361 ---------ANKY--ESLGNSLSKSVYD--GIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
AN Y + L + +VY + L + ++A +++K M + G EP+
Sbjct: 295 HARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPN 354
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEM---EENGCIPDIKTWTILIQGHCAANEVDRALL 464
+TY++VI LCK G+ E A + ++ C PD ++ +I C ++ A
Sbjct: 355 VVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYE 414
Query: 465 CFAKMMEKNYDADADLLDVLINGF 488
F +M+E A + + +G
Sbjct: 415 YFLRMVESKLVAKPHIYKAMADGL 438
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 113/492 (22%), Positives = 185/492 (37%), Gaps = 61/492 (12%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K PS Y+L++ L + L+ L M + + Y ++ L K + A
Sbjct: 274 KGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNAD- 332
Query: 183 LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
AA H+ + ++D + V+ + + K L D I V
Sbjct: 333 -AANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG------VTPGA 385
Query: 243 RIYPVKALGFFRWVGEHSGY-------KHNTI----TYNGILRVLARHESVRDFWNVVEE 291
R Y GFFR GY K N + TY ++ + + +N+V+E
Sbjct: 386 RAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKE 445
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M G ++ Y + + F + DAV++ + M + P
Sbjct: 446 MGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDT--------------- 490
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
Y+ + L+K + DEA + M GF+PD TY
Sbjct: 491 ----------------------FCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
I G +AG F A + EM E G IP+ T LI +C +V A F M+E
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ DA VL+NG + +VN A ++ EM K + P ++ TLI+ ++
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGK-GIAPDVFSYGTLIDGFSKLGNMQ 647
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSA-AYLQVF 587
+A ++ M + + + F G +E A E L +S K +P +A Y +
Sbjct: 648 KASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTII 707
Query: 588 ESFFNEGRHYEA 599
+ + G EA
Sbjct: 708 DGYCKSGDLAEA 719
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 110/513 (21%), Positives = 198/513 (38%), Gaps = 98/513 (19%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
RP+ +Y+ +++ + K L+ M+E + Y S++ L KAKK
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKK------ 505
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK------IGKKLEDMKIELSDNFVLTVL 239
MD L+++V D I +E + +D +V +L
Sbjct: 506 -------------MDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEML 552
Query: 240 KELRIYP------------------VKALGFFRWVGEHSGYKHNTITYNGILRVLARHES 281
E + P ++A FR + E G + TY ++ L ++
Sbjct: 553 -ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQ-GILGDAKTYTVLMNGLVKNGK 610
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
V D + EM+ +G D+ +Y + F K M+ A +F+ M+ +V
Sbjct: 611 VNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNV----- 665
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
+Y+ + + G ++A++++ M
Sbjct: 666 --------------------------------IIYNMLLGGFCRSGEIEKAKELLDEMSG 693
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
GF P+ +TY +I G CK+G +A + DEM+ G +PD +T L+ G C N+V+R
Sbjct: 694 KGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 753
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR-------LRPWQ 514
A+ F + EK + + + LIN G +L +MI ++ +P
Sbjct: 754 AITIF-ETNEKGCASSSAPFNALINWVFKF----GKTELTTDMINRLMDGSFDKFGKPND 808
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLK 570
T+ +I+ L LE A L M+K N P + ++ + + SE F +
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
++ P + Y + +F EG +A LL
Sbjct: 869 VIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 186/454 (40%), Gaps = 52/454 (11%)
Query: 225 DMKIELSDNFVLTVLKELRIY-PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
++ IE++ VL+VL+ R+ P K L FF V + +++ + L S+
Sbjct: 55 NLSIEINPEVVLSVLRSKRVDDPSKLLSFFNLVDSQKVTEQKLDSFSFLALDLCNFGSIE 114
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKF-RMMEDAVKLFEFMMDGPYK--------- 333
+VV M + + + + + I R ++F +D V LF ++DG +
Sbjct: 115 KAHSVVIRMIERKWPV-AEVWSSIVRCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVF 173
Query: 334 -------------PSVQDCSLLLRSISSINNPDL------GLVFRVA----NKYESL--- 367
PS+ C+ LL ++ N DL G+V R YE L
Sbjct: 174 VFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGA 233
Query: 368 ----GN-SLSKSVYDGIHRAL-TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
GN L+K V L T DEA ++ K+M G P +Y+ +I GLCK
Sbjct: 234 HCRDGNVQLAKDVLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQ 293
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
R EDA ++L EM G D ++ILI G D A +M+ + D +
Sbjct: 294 KRLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMY 353
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
D I + + A L MI + P + +LIE + + + LL +K
Sbjct: 354 DYFICVMSKEGAMEKAKALFDGMI-TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIK 412
Query: 542 KQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHY 597
K+N P + V+ + G ++ A +K + P+ Y + ++F + R
Sbjct: 413 KRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFG 472
Query: 598 EAKDLLYKC-PHHIRQDSKI--SLLFGSAKSNKV 628
+A +L + I D+ SL+ G +K+ K+
Sbjct: 473 DAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKM 506
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 131/308 (42%), Gaps = 11/308 (3%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G N I YN +L R + +++EM +G+ + TY I + K +
Sbjct: 658 QAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLA 717
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
+A +LF+ M P + L+ +N+ + + N+ G + S + ++
Sbjct: 718 EAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEK---GCASSSAPFNA 774
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFE----PDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + K G+ + M+ + + F+ P+++TY+ +I LCK G E A + M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++ +P + T+T L+ G+ F +++ + D + V+IN FL +
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 495 NGAYKLLVEMIEKVRL----RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
A LL +M K + + +T + L+ +E A ++ M + Y P
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSS 954
Query: 551 PFVQYISK 558
++ I++
Sbjct: 955 TVIELINE 962
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 177/427 (41%), Gaps = 18/427 (4%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
++ + S VY L++ L N K L++MK++ C +E ++ I+ KA
Sbjct: 87 QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG 146
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
L G+ ++++++ + DM V T
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVV 206
Query: 242 LRIYPV-----KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
++ + + A R + +H G N+I Y ++ L+ + V + ++EEM G
Sbjct: 207 MKAFCMVNEVDSACSLLRDMTKH-GCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMG 265
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--L 354
E D+ T+ + K + +A KL + M+ + L+ + + D
Sbjct: 266 CEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEAR 325
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM-KAMKNAGFEPDNITYSQ 413
++ ++ N L N+L GRF+EA+ ++ K M AGFEPD T++
Sbjct: 326 AMLSKIPNPNTVLYNTLI--------NGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNI 377
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GLCK G A LDEM + G P++ T+TILI G C + A M K
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + LI ++ A ++ EM K +P TF +LI L ++EEA
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSK-GCKPDIYTFNSLIYGLCKNDKMEEA 496
Query: 534 MNLLRLM 540
+ L R M
Sbjct: 497 LGLYRDM 503
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 170/378 (44%), Gaps = 21/378 (5%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L L EL + ++ F G GY H+ Y ++ L + ++++MK E
Sbjct: 64 LCKLLELPLDVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDE 123
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINNPD 353
G +I I R + K + A +L M G Y +P+ + +++L + + N P
Sbjct: 124 GCVFKESLFILIMRYYGKAGLPGQATRLL-LDMWGVYCFEPTFKSYNVVLEILVAGNCPK 182
Query: 354 LGL-VFRVANKYESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
+ VF Y+ L +S +VY + +A + D A +++ M G P++I
Sbjct: 183 VAPNVF-----YDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSII 237
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y +I L + R +A +L+EM GC PD++T+ +I G C A + A +M+
Sbjct: 238 YQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRML 297
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+++ ADA + L++G +V+ A +L ++ P + TLI + + R
Sbjct: 298 LRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIP-----NPNTVLYNTLINGYVVSGRF 352
Query: 531 EEAMNLL-RLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQ 585
EEA +LL + M + P F + + K G + A EFL + K + P+ Y
Sbjct: 353 EEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTI 412
Query: 586 VFESFFNEGRHYEAKDLL 603
+ + F +G EA ++
Sbjct: 413 LIDGFCKQGHFEEASKVV 430
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 136/332 (40%), Gaps = 38/332 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
KK F P+ Y++++ + ++ + M + Y ++G L K K
Sbjct: 400 KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQ 459
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D AL + + K D T ++ G +DK+ +
Sbjct: 460 D--ALQMYGEMSSKGCKPD--IYTFNSLIYGLCKNDKMEE-------------------- 495
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
ALG +R + G NT+TYN ++ R E ++ +V EM+ G +D
Sbjct: 496 -------ALGLYRDM-LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDN 547
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
TY + + K E + L E M PS+ C++L+ S + L F
Sbjct: 548 ITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFL-- 605
Query: 362 NKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ + L+ + Y+ + L K+GRF EA + ++ G PD +TY+ +I C
Sbjct: 606 --RDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYC 663
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
G F DAC +L + NG IP+ TW+ILI
Sbjct: 664 YEGLFNDACQLLFKGVSNGFIPNEITWSILIN 695
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 49/347 (14%)
Query: 265 NTITYNGILR---VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
NT+ YN ++ V R E +D + + M G+E D T+ + K + A+
Sbjct: 335 NTVLYNTLINGYVVSGRFEEAKDL--LYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSAL 392
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ + M+ ++P+V ++L+ DG
Sbjct: 393 EFLDEMVKKGFEPNVITYTILI---------------------------------DG--- 416
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K G F+EA K++ +M G + + Y+ +I LCK G+ +DA + EM GC P
Sbjct: 417 -FCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKP 475
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DI T+ LI G C ++++ AL + M+ + A+ + LI+ FL + + A KL+
Sbjct: 476 DIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLV 535
Query: 502 VEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EM + R P T+ LI+ L E+ + L+ M + P I+ F
Sbjct: 536 GEM--RFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFC 593
Query: 560 --GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G V DA +FL+ + + P Y + GR EA +L
Sbjct: 594 RTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 107/490 (21%), Positives = 191/490 (38%), Gaps = 94/490 (19%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+S +Y +++ L + + + L M C + +T+ ++ L KA + + A L
Sbjct: 233 PNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKL 292
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGK---------KLEDMKIELSDNFVLT 237
HD M+ D A L+ L ++GK K+ + L + +
Sbjct: 293 ---HDRMLLR---DFTADALIQGYLMHGLC-RMGKVDEARAMLSKIPNPNTVLYNTLING 345
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ R K L + V +G++ + T+N ++ L + + ++EM K+G+
Sbjct: 346 YVVSGRFEEAKDLLYKNMV--IAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGF 403
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
E ++ TY + F K E+A K
Sbjct: 404 EPNVITYTILIDGFCKQGHFEEASK----------------------------------- 428
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
V N + G SL+ Y+ + AL K G+ +A +M M + G +PD T++ +I+G
Sbjct: 429 --VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486
Query: 418 LCKAGRFEDACN-----------------------------------VLDEMEENGCIPD 442
LCK + E+A ++ EM GC D
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI+ C ++ L +M + + ++LIN F +VN A + L
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+MI++ L P T+ +LI L R +EA+NL ++ + P + IS++
Sbjct: 607 DMIQR-GLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYE 665
Query: 560 GTVEDASEFL 569
G DA + L
Sbjct: 666 GLFNDACQLL 675
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 8/242 (3%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFEPDNITYSQVIFGLCKAGRFED 426
G +S++ I R K G +A +++ M FEP +Y+ V+ L +
Sbjct: 124 GCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKV 183
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A NV +M G P + T+ ++++ C NEVD A M + ++ + +LI+
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
RVN A KLL EM + P TF +I L A R+ EA L M +++
Sbjct: 244 ALSENNRVNEAMKLLEEMF-LMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFT 302
Query: 547 P---FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + + G V++A L + P++ Y + + GR EAKDLL
Sbjct: 303 ADALIQGYLMHGLCRMGKVDEARAMLSKIP---NPNTVLYNTLINGYVVSGRFEEAKDLL 359
Query: 604 YK 605
YK
Sbjct: 360 YK 361
>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
Length = 495
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 174/412 (42%), Gaps = 45/412 (10%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
+++ V+ VL+ ++ P A F+W ++H TYN L L + + +
Sbjct: 3 TEDDVIHVLENIK-SPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFD 61
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
+M + +I TY + R + A++L + M P+ ++L+ +
Sbjct: 62 DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNG 121
Query: 351 NPDLG--LVFRVANK-------YESLGNSLSKS-----------------------VYDG 378
D L R++++ Y L L K+ Y+G
Sbjct: 122 KVDAAYELYKRLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNG 181
Query: 379 IHRALTKLGRFDEA----EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + GR ++A E+M++ K + PD +Y+ VI G CKA + A VL M
Sbjct: 182 LLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRM 241
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++GC P++ T+ L+ G C ++D A F M+E+N + A VLI G R+
Sbjct: 242 IKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRI 301
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A V+M+ + + P T+ LI L A ++E+A+ +L+ M P + +
Sbjct: 302 DKANDYFVDMLRR-GVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTR 360
Query: 555 YIS---KFGTVEDASEF----LKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
I K G +E A++ + + + K P S AY + + + EA
Sbjct: 361 VIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEA 412
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 96/444 (21%), Positives = 172/444 (38%), Gaps = 57/444 (12%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T + V++VL + + P+ AS F W ++ F+ + Y+ L LV +
Sbjct: 3 TEDDVIHVLENIKS-PKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFD 61
Query: 154 RMKEDHCYIEEETYLSIL-GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLG 212
M C TY +L G+ AK + L L M+ + LV +
Sbjct: 62 DMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTF--IVNMLVSCLCK 119
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLK-ELRIYPV-------KALGFFRWVGEHSGYKH 264
+ K+ E K LSD L + + Y + +AL F + E +
Sbjct: 120 ---NGKVDAAYELYK-RLSDECSLDRISYNMLTYGLCKADQIDRALAVFGEM-EENAVVP 174
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEM--KKEGYEM--DIDTYIKISRQFQKFRMMEDA 320
+ +TYNG+L R + ++EEM K+G ++ D+ +Y + F K R + A
Sbjct: 175 SLLTYNGLLYGYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTA 234
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD----------------LGLVFRV---- 360
+ M+ P+V + LL + D + + V
Sbjct: 235 RYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITG 294
Query: 361 ---------ANKY--ESLGNSLSKSVYD--GIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
AN Y + L + +VY + L + ++A +++K M + G EP+
Sbjct: 295 HARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPN 354
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEM---EENGCIPDIKTWTILIQGHCAANEVDRALL 464
+TY++VI LCK G+ E A + ++ C PD ++ ++ C ++ A
Sbjct: 355 VVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYE 414
Query: 465 CFAKMMEKNYDADADLLDVLINGF 488
F +M+E A + + +G
Sbjct: 415 YFLRMVESKLVAKPHIYKAMADGL 438
>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Brachypodium distachyon]
Length = 642
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 154/362 (42%), Gaps = 17/362 (4%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + +T+ Y I+ + +R ++ M EG ++ T+ + + F +
Sbjct: 255 HRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVH 314
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKS-VY 376
DA+ ++ +M+ + PS ++L+R + I + L VF K + L + + S +
Sbjct: 315 DALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLI 374
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
DG +K G D A + M NAG +P+ + Y+ ++ LCK F+ A N++D+M
Sbjct: 375 DG----FSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSL 430
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C P+ T+ LI+ C RAL F M + + L++G +
Sbjct: 431 ENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCED 490
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A ++L EM+ ++ T I L R ++EAM LL M Q P F I
Sbjct: 491 ALRMLTEMLNH-GFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAII 549
Query: 557 SKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLLYK------C 606
+ G V A+ L + P + AY + ++ + +A L K C
Sbjct: 550 HAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYEGIC 609
Query: 607 PH 608
P+
Sbjct: 610 PN 611
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 148/381 (38%), Gaps = 47/381 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN +L L R V V + M+K G E ++ TY + + + + A ++ + M
Sbjct: 129 VYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDEM 188
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+P + ++ ++ ++ D + + +G S Y+ + AL
Sbjct: 189 ARKGCRPDEVSHTTIISALCKLDRLDEAR--GILAEMTPVGAS-----YNAVVHALCGQF 241
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R E ++ M + G PD + Y+ ++ CKA AC +L M GC+P+++T+T
Sbjct: 242 RMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFT 301
Query: 448 -----------------------------------ILIQGHCAANEVDRALLCFAKMMEK 472
+LI+G C ++ RAL F+ M +
Sbjct: 302 VLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKS 361
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ D LI+GF ++ A + +M +P + +++ L ++
Sbjct: 362 DCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDM-TNAGCKPNVVVYTNMVDVLCKKVMFDQ 420
Query: 533 AMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKAL-SVKEY---PSSAAYLQVFE 588
A NL+ M +N PP F I + A L ++ Y P+ Y ++
Sbjct: 421 AENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLH 480
Query: 589 SFFNEGRHYEAKDLLYKCPHH 609
F EG +A +L + +H
Sbjct: 481 GLFREGNCEDALRMLTEMLNH 501
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/472 (22%), Positives = 189/472 (40%), Gaps = 85/472 (18%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVT 151
+++H +++ L KLD E + P Y+ ++ L + +++ ++
Sbjct: 197 EVSHTTIISALCKLDRLDEARGIL-------AEMTPVGASYNAVVHALCGQFRMREVFLV 249
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVL 211
+ M + Y SI+G KA++ A+ MV E + NV +T +V
Sbjct: 250 VDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILAR---MVTEGCVPNV-QTFTVLVK 305
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW-VGEHSGYKHNTITYN 270
G +DD K+ D ALG + W V E G+ +TI+YN
Sbjct: 306 GF-FDDG---KVHD-----------------------ALGMWNWMVAE--GWAPSTISYN 336
Query: 271 GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG 330
++R L ++ V M K D+ TY + F K ++ A+ ++ M +
Sbjct: 337 VLIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNA 396
Query: 331 PYKPSV----------------------------QDC-------SLLLRSISSINNPDLG 355
KP+V ++C + L+RS+ DLG
Sbjct: 397 GCKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLC-----DLG 451
Query: 356 LVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
R N + + G + Y+ + L + G ++A +M+ M N GFE ++Y+
Sbjct: 452 RAGRALNVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYN 511
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
I GLC+ ++A +L M G PD T+ +I +C V A +M
Sbjct: 512 TTISGLCQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAV 571
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
N + L++G SQ +++ A L++M+ + + P +AT+ L+ +
Sbjct: 572 NCPRNIVAYTSLMSGLCSQHKLDDAMVYLLKMLYE-GICPNEATWNVLVRGI 622
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 205/510 (40%), Gaps = 68/510 (13%)
Query: 69 SLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPS 128
S+ +L+ + L+ + EE S L V+ L+ ++D A +F + + K F+ +
Sbjct: 17 SIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKH-EHDITLALEYFKSIANSKSFKHT 75
Query: 129 STVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALN 187
Y +M+ L ++ + L++MK + E+ ++S++G ++A + L
Sbjct: 76 PLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFY 135
Query: 188 QFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV 247
+ D VK + ++D +L + I +MK
Sbjct: 136 RMQDFRVKPTV--KIYNHILDALLDENRFQMINPIYSNMK-------------------- 173
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY--- 304
G + N TYN +L+ L ++ V ++ EM +G + D +Y
Sbjct: 174 -----------KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 305 ---------IKISRQFQ------------------KFRMMEDAVKLFEFMMDGPYKPSVQ 337
+K +R+ K E+A +L + MM+ P+V
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ ++ ++S N +L L V K + G S + + + + G EA
Sbjct: 283 SYTTIINALSDAGNVELSLA--VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M G P+ + Y+ ++ GLC DA +V ++ME NGC P+++T++ LI G+ A
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++D A + M+ + +++ N AY L+E ++ P TF
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY-CLIENMQVENCPPNTVTF 459
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T I+ L G+ R++ A+ + M P
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 196/463 (42%), Gaps = 44/463 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY---LSILGVLKKAK 178
K P+ Y+++L+ L + + L M C +E +Y +S L L K K
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233
Query: 179 KASDLA--------ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK------IGKKLE 224
+A +LA N +G+ KE + A L+D ++ D I L
Sbjct: 234 EARELAMSFTPSVPVYNALINGVCKEYTFEE-AFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 225 DM-KIELS-----DNFVLTVLKELRIYPVKALGFFRWVGEHS-----------GYKHNTI 267
D +ELS F L + GFF G H G N +
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN ++ L S+ D +V +M+ G ++ TY + + K ++ A +++ +M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 328 MDGPYKPSV--QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALT 384
+ P+V C + + +S+ N L+ + + N +V ++ + L
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM-----QVENCPPNTVTFNTFIKGLC 467
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
GR D A K+ M N+G P+ TY++++ L K RF +A ++ +ME G ++
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ +I G+C A + AL KM+ + DA ++++I+ + Q +VN A +L+ +
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM-DR 586
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + P + +LI + +EEA+ LR M + P
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 177/416 (42%), Gaps = 43/416 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL +F+ + +KH +TY ++ LA + ++++MK EG D +I +
Sbjct: 59 ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+++ E A+K F M D KP+V+ + +L ++ ++ ++ + + + G
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL--LDENRFQMINPIYSNMKKDG 176
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR----- 423
+ Y+ + +AL K R D A K++ M + G +PD ++Y+ +I LCK G+
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 424 -------------------------FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
FE+A +LDEM G P++ ++T +I A
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
V+ +L AKM + + LI GF + + A MI + + P +
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYN 355
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK-ALSV 574
L+ L R L +A+++ M+ P + I +K G ++ ASE ++
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415
Query: 575 KEYPSSAAYLQVFE-----SFFNEGRHYEAKDLLYKC-PHHIRQDSKISLLFGSAK 624
+P+ AY + + S FN+ + C P+ + ++ I L GS +
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+ W+ H G N + Y ++ VL R+ + ++E M+ E + T+ +
Sbjct: 409 WNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
++ A+K+F+ M + P+ + LL S+ + + G F + E G L+
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL--LKDRRFGEAFGLVKDMEHRGIELN 525
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ I G EA +++ M G +PD IT + VI CK G+ A ++D
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+ PDI +T LI G C V+ A++ +M+ + + +VL+ S
Sbjct: 586 RLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645
Query: 493 RVNGAYKLL 501
+GA + L
Sbjct: 646 GHSGAVQFL 654
>gi|224102411|ref|XP_002312667.1| predicted protein [Populus trichocarpa]
gi|222852487|gb|EEE90034.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 141/340 (41%), Gaps = 8/340 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+N L +L R V M + G E D+ T+ I K + + AV+ + M
Sbjct: 116 AFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNM 175
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+D +P + C L + DL + L + +S VY+ + + G
Sbjct: 176 LDKGIRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGL-SEVSTLVYNALISGFCRAG 234
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R D+A M+ M G +PD +TY+ ++ C FE+A +L +ME + PD+ ++
Sbjct: 235 RIDKALAMVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYN 294
Query: 448 ILIQGHCAANEVDRA-LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
L++ HC AN D+A L KM+ K + D + +I F S AYKL EM
Sbjct: 295 QLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISNNRRAYKLFEEMGR 353
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
K + P TF LI+ L + A LL LM P F + + K G VE
Sbjct: 354 K-GIAPDVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVE 412
Query: 564 DA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
A S F + P +Y + F R E L
Sbjct: 413 MAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHL 452
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 181/427 (42%), Gaps = 31/427 (7%)
Query: 113 SAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFW---VTLRRMKEDHCYIEEETYLS 169
S F + +C K+F T +L+++ + W + L + ++ EE+ L
Sbjct: 83 SRFISGLCQTKEF----TFIDNLLKDMEKLHCVPDIWAFNIYLNLLFREN---REESALE 135
Query: 170 ILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIE 229
+ G + + + D+ DG+ K D + ++++ D K + +
Sbjct: 136 VFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKGIRPDN--KACVALAVG 193
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSG--YKHNTITYNGILRVLARHESVRDFWN 287
L D + + EL I G SG + +T+ YN ++ R +
Sbjct: 194 LCDGGQVDLAYELII------------GVISGGLSEVSTLVYNALISGFCRAGRIDKALA 241
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
+V M + G + D+ TY + M E+AVKL + M +P V + LL++
Sbjct: 242 MVSFMSRTGCKPDLVTYNVLLNYCCNEFMFEEAVKLLKKMECSAIEPDVYSYNQLLKAHC 301
Query: 348 SINNPDLGLVFRVANKY-ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
N+PD +F V + + +S Y+ I +A + A K+ + M G P
Sbjct: 302 KANHPDKAYLFMVTKMVPKGFCDVVS---YNTIIKAFCSISNNRRAYKLFEEMGRKGIAP 358
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D +T++ +I + G + A +LD M G +PD +T +I HC + +V+ A F
Sbjct: 359 DVVTFTILIKAFLREGNSDMAKKLLDLMAGMGLLPDRIFYTTIIDHHCKSGKVEMAHSIF 418
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M+EK D + LINGF RV L +M+++ P + T+K +I L+
Sbjct: 419 CDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQRGSF-PDEVTYKLIIGALVR 477
Query: 527 ARRLEEA 533
+L +A
Sbjct: 478 ENKLSDA 484
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 75/162 (46%), Gaps = 1/162 (0%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ L + RFD A M GF + TYS+ I GLC+ F N+L +ME
Sbjct: 47 YNRFIGVLIRHSRFDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDME 106
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ C+PDI + I + N + AL F +M+E+ + D ++I+G K+ +
Sbjct: 107 KLHCVPDIWAFNIYLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFD 166
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
A + + M++K +RP L L +++ A L+
Sbjct: 167 AAVQFWLNMLDK-GIRPDNKACVALAVGLCDGGQVDLAYELI 207
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 107/234 (45%), Gaps = 4/234 (1%)
Query: 258 EHSGYKHNTITYNGILRVLAR-HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
E S + + +YN +L+ + + + + +V +M +G+ D+ +Y I + F
Sbjct: 282 ECSAIEPDVYSYNQLLKAHCKANHPDKAYLFMVTKMVPKGF-CDVVSYNTIIKAFCSISN 340
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
A KLFE M P V ++L+++ N D+ ++ + +G + Y
Sbjct: 341 NRRAYKLFEEMGRKGIAPDVVTFTILIKAFLREGNSDMAK--KLLDLMAGMGLLPDRIFY 398
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I K G+ + A + M G PD ++Y+ +I G CK+ R + ++ ++M +
Sbjct: 399 TTIIDHHCKSGKVEMAHSIFCDMVEKGITPDVVSYNALINGFCKSLRVGEVMHLYEQMLQ 458
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
G PD T+ ++I N++ A + +MME+ D + ++LIN S
Sbjct: 459 RGSFPDEVTYKLIIGALVRENKLSDACRVWDQMMERGLTLDRGISEMLINAIQS 512
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 4/194 (2%)
Query: 358 FRVANKYES----LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
F +A+ Y S LG SLS Y L + F + ++K M+ PD ++
Sbjct: 60 FDLAHHYYSKMAPLGFSLSSFTYSRFISGLCQTKEFTFIDNLLKDMEKLHCVPDIWAFNI 119
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ L + R E A V M E G PD+ T+TI+I G C + D A+ + M++K
Sbjct: 120 YLNLLFRENREESALEVFGRMVERGREPDVVTFTIIIDGLCKMKKFDAAVQFWLNMLDKG 179
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D L G +V+ AY+L++ +I + LI A R+++A
Sbjct: 180 IRPDNKACVALAVGLCDGGQVDLAYELIIGVISGGLSEVSTLVYNALISGFCRAGRIDKA 239
Query: 534 MNLLRLMKKQNYPP 547
+ ++ M + P
Sbjct: 240 LAMVSFMSRTGCKP 253
>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 822
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/531 (22%), Positives = 235/531 (44%), Gaps = 63/531 (11%)
Query: 100 YVLRKLDNDPEKASAFFNWVCDKKQFRPSSTV-YSLMLRNLVNKDSLKQFWVTLRRMKED 158
+V+ ++ N P+ FF+W P + V YS +L+ +V + + L MK
Sbjct: 64 FVIDRIHN-PQHGLYFFHWASTLPFSSPLNNVAYSSLLKLMVKYRLFSEIEIVLEDMKNR 122
Query: 159 HCYIEEETYLSIL------GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVD---V 209
+ E S++ G + KA K + + ++ +A +++ LV V
Sbjct: 123 NFKPTLEALNSVICVYAEYGFVDKAVKMFYMVC--ELYNCFPCVVANNSLLNCLVKNGKV 180
Query: 210 VLGSDWDDKIGKKLEDMKIELS-DNF-VLTVLKEL----RIYPVKALGFFRWVGEHSGYK 263
+ + DK+ ++ D ++L DN+ ++ V+K L ++ + L RW +G
Sbjct: 181 DVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGRKLIDDRW---GNGCV 237
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF---QKFRMMEDA 320
N + YN I+ + ++ V EE+K +G+ ++TY + F KF++++
Sbjct: 238 PNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQL 297
Query: 321 ------------VKLFEFMMDGPYKPSVQD-CSLLLRSISSIN-NPDLGLVFRVANKYES 366
VK+F ++D YK + D + ++R ++ + PD+
Sbjct: 298 LNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDI------------ 345
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ Y+ + GR EAE+ ++ K P+ +Y+ ++ CK G +
Sbjct: 346 -------TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVM 398
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++L ++ E G PD+ ++ I G A E+D AL+ KMMEK DA + +VL++
Sbjct: 399 ASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMS 458
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + R A LL EM++ + L+P + TL++ + L++A L ++ +
Sbjct: 459 GLCKKGRFPAAKLLLSEMLD-LNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGID 517
Query: 547 PFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNE 593
P + ++ + K G + DA ++ + + + P + V + + +
Sbjct: 518 PGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQ 568
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 4/206 (1%)
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
D+A ++ + + + G +P + Y+ +I GLCK G+ DA + +++M+ PD T +
Sbjct: 501 LDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I G+ +++D AL F +MM++ Y + LINGF ++ A K+ M +
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAM-QSF 619
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEF 568
L P T+ LI + E+A + LM N P F I+ + + +
Sbjct: 620 NLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLL 679
Query: 569 LKALSVKEYPSSAAYLQVFESFFNEG 594
++ E + L F + +EG
Sbjct: 680 IEK---NEENDRSLILDFFATMISEG 702
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 94/221 (42%), Gaps = 44/221 (19%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + YN +++ L + + D + V +MK + D T+ + + K ++ A
Sbjct: 515 GIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSA 574
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K+F MM YKP+V VA Y SL N
Sbjct: 575 LKMFGQMMKQKYKPNV-----------------------VA--YTSLIN----------- 598
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K+ AEK+ +AM++ EP+ +TY+ +I G K G+ E A + + M N C+
Sbjct: 599 -GFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCL 657
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
P+ T+ LI G N + LL +EKN + D L+
Sbjct: 658 PNDTTFHYLING--LTNITNTTLL-----IEKNEENDRSLI 691
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 82/201 (40%), Gaps = 2/201 (0%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++ EM + D Y + F + ++ A +LFE +M P V +++++ +
Sbjct: 472 LLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLC 531
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ + NK + ++ + + + K D A KM M ++P+
Sbjct: 532 KCGKMTDAVSY--VNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPN 589
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ +I G CK A V M+ P++ T+TILI G + ++A F
Sbjct: 590 VVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFE 649
Query: 468 KMMEKNYDADADLLDVLINGF 488
M+ N + LING
Sbjct: 650 LMLMNNCLPNDTTFHYLINGL 670
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 73/180 (40%), Gaps = 10/180 (5%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
YK N + Y ++ + + V M+ E ++ TY + F K E A
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAA 645
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNP----------DLGLVFRVANKYESLGNSL 371
FE M+ P+ L+ +++I N D L+ S G S
Sbjct: 646 SFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQ 705
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y+ I L K G D A+ + M GF D++ +S ++ GLC+ G+ ++ N++
Sbjct: 706 VIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNII 765
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 130/292 (44%), Gaps = 9/292 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N ++ N +L+ L V + E + K G +I TY + F +
Sbjct: 166 GIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVD 225
Query: 321 VK-----LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
++ L + M G P+V ++ + + G+ +R+ L+
Sbjct: 226 IRRASEILGKIYMSGE-TPNVVTYGTYIKGLCKVG--LFGVAWRLIQNLCRKNQPLNNHC 282
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + L + G DEA ++ K MKN+G PD +YS +I G C+ GR + A V EM
Sbjct: 283 FNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR 342
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+G +P+I +++ILI G C VD+AL F +M D +LI+GF + ++
Sbjct: 343 NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMD 402
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A K EM P + +LI+ +++ A+ R+M+K P
Sbjct: 403 SAIKFWEEMTSN-NFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWP 453
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 127/296 (42%), Gaps = 3/296 (1%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FR + + G +TI N IL + R + E+ ++ G + +Y +
Sbjct: 439 ALKEFR-IMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFI 497
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ + + E A++L M+ P V + S L+ + N + ++ + K +G
Sbjct: 498 HRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFI--KMTKVG 555
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ + Y + + D A ++ K MK + PD I Y+ ++ G C G A
Sbjct: 556 ITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRAR 615
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ DEM GC P++ T+T I + N+ ++A + KM E+ D L +LI F
Sbjct: 616 ALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAF 675
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+ +N A L EM ++ R P + LI + + ++A L M+ +
Sbjct: 676 CNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKG 731
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/419 (20%), Positives = 154/419 (36%), Gaps = 114/419 (27%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG N +TY ++ L + W +++ + ++ ++ + + + ++++
Sbjct: 239 SGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDE 298
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F+ M + P V S+L+ DG
Sbjct: 299 ASEVFKEMKNSGILPDVYSYSILI---------------------------------DGF 325
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R GR D+A ++ K M+N+G P+ +YS +I G CK GR + A V +EM+ +G
Sbjct: 326 CRK----GRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGI 381
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ +++ILI G C ++D A+ + +M N+ A LI G+ K+ A K
Sbjct: 382 LPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALK 441
Query: 500 ----------------------------------LLVEMIEK--VRLRPWQATFKTLIEK 523
L E ++ V P+ ++ I +
Sbjct: 442 EFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPY--SYNEFIHR 499
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSV----- 574
+ E+A+ LL +M K+N P + IS F ++ + F+K V
Sbjct: 500 ICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFN 559
Query: 575 ------------------------------KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ YP AY + F N G A+ L
Sbjct: 560 VKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALF 618
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 153/387 (39%), Gaps = 46/387 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++SG + +Y+ ++ R V V +EM+ G +I +Y + F K +
Sbjct: 307 KNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRV 366
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A+++FE M + P V S+L+ + D + F E N+ S S ++
Sbjct: 367 DKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFW----EEMTSNNFSPSAFN 422
Query: 378 --GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + K +F A K + M+ G PD I + ++ C+ F A + ++ +
Sbjct: 423 YCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQ 482
Query: 436 ENG-----------------------------------CIPDIKTWTILIQGHCAANEVD 460
ENG +PD+ ++ LI +
Sbjct: 483 ENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSE 542
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
+A++ F KM + + +LIN F+S +++ AY+L M E R+ P Q + +L
Sbjct: 543 KAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKES-RVYPDQIAYTSL 601
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS-VKE--- 576
+ + A L M ++ P + +I+++ + ++ K +KE
Sbjct: 602 VAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGV 661
Query: 577 YPSSAAYLQVFESFFNEGRHYEAKDLL 603
YP Y + +F N G A+ L
Sbjct: 662 YPDQILYTMLIAAFCNTGEMNRAEALF 688
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 152/307 (49%), Gaps = 12/307 (3%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+LK + + V ALGFF W+ ++H+ TY ++ +L R + ++++M K+G
Sbjct: 352 ILKRVDDHAV-ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGC 410
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLG 355
+ ++ TY +I + + ++DAV +F+ M + +P V C+L+ + + S + +G
Sbjct: 411 QPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMG 470
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ K + G + Y + L K G + A ++ M + G P+ +TY+ +I
Sbjct: 471 MY----EKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMI 526
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKN 473
KA +E A + +M+++G PD T+ I+++ GHC E + F +M +KN
Sbjct: 527 ALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGI--FIEMQKKN 584
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ D + +L++ + V A++ M+ K L+P T +L+ L +L +A
Sbjct: 585 WVPDEPVYGLLVDLWGKSGNVQKAWEWYHAML-KAGLKPNVPTCNSLLSAFLRVHQLSDA 643
Query: 534 MNLLRLM 540
LL+ M
Sbjct: 644 YQLLQSM 650
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +DA NV +M+E GC PD
Sbjct: 389 LGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPD 448
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H + +D A+ + KM + D V+IN +N A++L
Sbjct: 449 RVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFC 508
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M+++ + P T+ +I AR E A+ L R M++ + P
Sbjct: 509 RMVDEGCV-PNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEP 552
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 157/422 (37%), Gaps = 68/422 (16%)
Query: 62 FSTSPN--SSLELILA-CDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNW 118
F +PN S+ IL W E + +L+ + +L+++D D A FF W
Sbjct: 310 FLNAPNVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVD-DHAVALGFFYW 368
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK 178
+ +FR Y+ M+ L L +M +D C TY I+ +A
Sbjct: 369 LKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRAN 428
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAK-TLVDVVLGSDW-DDKIG--KKLEDMKIELSDNF 234
D A+N F D V TL+D+ S + D +G +K++D + D F
Sbjct: 429 YLQD--AVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLT-PDTF 485
Query: 235 VLTVLKELRIYPVKALG-----------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
+V+ + LG F R V E G N +TYN ++ + A+ +
Sbjct: 486 TYSVM-------INCLGKAGHLNAAHRLFCRMVDE--GCVPNLVTYNIMIALQAKARNYE 536
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ +M++ G+E D TY + +E+A +F M + P
Sbjct: 537 IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP--------- 587
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ P GL+ + K G +A + AM AG
Sbjct: 588 ------DEPVYGLLVDLWGKS----------------------GNVQKAWEWYHAMLKAG 619
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+P+ T + ++ + + DA +L M G P ++T+T+L+ A D
Sbjct: 620 LKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTNDMGF 679
Query: 464 LC 465
C
Sbjct: 680 CC 681
>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
Length = 603
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 166/414 (40%), Gaps = 46/414 (11%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL--------------- 273
+LS + VL LR ALGF+ W G+ H T N +L
Sbjct: 60 KLSRDTFGGVLGRLRC-TCNALGFYHWAATRPGFSHTLFTRNSLLLALVRGGHLSDALGF 118
Query: 274 -------------RVLARHESVRDFWNVV----EEMKKEGYEMDIDTYIKISRQFQKFRM 316
+L R + RD + VV EMK G + T+ I R
Sbjct: 119 FQSSISEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRD 178
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSK 373
++ AV F + +P++ ++L+ + + V R + +E + G
Sbjct: 179 LDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHK-----VERACDVFEEMIRKGYKPDI 233
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y + L+K GR DEA K++ M G P + Y+ ++ GLCK GR ++A + E
Sbjct: 234 IAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQE 293
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M P + T++ ++ G+ +V++A +M +++ D + I S R
Sbjct: 294 MRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGR 353
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K+ M+EK +P T+ +I+ + A ++LRLM K P +
Sbjct: 354 REEAEKVFETMVEK-GCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 412
Query: 554 QYISKF---GTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F +E+A E + + L PS+ Y V + + EA +LL
Sbjct: 413 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELL 466
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 118/258 (45%), Gaps = 6/258 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TI+Y + L + V E M ++G + D+ TY I F K M A +
Sbjct: 337 DTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVL 396
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M KP+ ++++ + + L + + G S Y+ + AL
Sbjct: 397 RLMDKAAVKPNRYIYTMIMDGF--VKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454
Query: 385 KLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
KL + DEA ++++ M + EP +TYS +I GL K G E A ++L EM +NG IPD
Sbjct: 455 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 514
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+T LIQ A +V RA+ +M++ D L+ L + V+ A+ LL
Sbjct: 515 CFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQ-ILCRSDVDAAWDLLQ 573
Query: 503 EMIEKVRLRPWQATFKTL 520
EM+ P + TFK +
Sbjct: 574 EMMRNGHT-PNEFTFKAV 590
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 7/328 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GYK + I Y+ ++ L++ V + +V+ M G Y I K +++A
Sbjct: 228 GYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEA 287
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
VK + M +P V S ++ I + F V + + Y
Sbjct: 288 VKTIQEMRRRRLRPRVDTYSFIV--TGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFI 345
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL +GR +EAEK+ + M G +PD TY +I CK G A +VL M++
Sbjct: 346 EALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVK 405
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ +T+++ G ++ ++ AL + ++++ + +IN K+++ A +L
Sbjct: 406 PNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALEL 465
Query: 501 LVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
L EM K L P T+ +I L E A +LL M P +Q +
Sbjct: 466 LREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTL 525
Query: 557 SKFGTVEDASEFL-KALSVKEYPSSAAY 583
+ G V A E L + L +P Y
Sbjct: 526 AGAGKVSRAMELLEEMLKAGIFPDDHTY 553
>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
Length = 1035
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 7/347 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K N TYN ++ ++ ++EEM G + + TY + K +
Sbjct: 267 NGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCRE 326
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A F+ M+ KPSV ++L ++ L + + N + G S + +++
Sbjct: 327 ARFFFDSMIGKGIKPSVTTYGIMLHGYAT--KGALSEMHDLLNLMVANGISPNHHIFNIF 384
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K G D+A + M+ G PD ++Y +I LCK GR +DA ++M G
Sbjct: 385 FSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGV 444
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI ++ L+ G C ++ ++ F +M+ + + ++ + RV +
Sbjct: 445 TPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQR 504
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYI 556
LV+ IE + +RP ++ TLI+ A ++EA LL M P +
Sbjct: 505 -LVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGY 563
Query: 557 SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
K G ++ A S F K LS P Y + F R EAK+L
Sbjct: 564 CKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKEL 610
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 147/343 (42%), Gaps = 15/343 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +N A+ + ++ +M+++G D +Y + K ++D
Sbjct: 372 NGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDD 431
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL--GLVFRVANKYESLGNSLSKSVYD 377
A F M++ P + S L+ + +++ + L F + N +G + ++
Sbjct: 432 AEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN----VGIHPNIVFFN 487
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I L K GR E ++++ +++ G PD I+Y+ +I G C AG ++A +L+ M
Sbjct: 488 TILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSV 547
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD ++ L+ G+C A +D A F KM+ + +++G KR + A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 498 YKLLVEMIEKVRLRPWQA-TFKTLIEKLLGARRLEEAM----NLLRLMKKQNYPPFPEPF 552
+L + MI W T+ ++ L + ++EA+ NL + N F
Sbjct: 608 KELYLNMINSG--TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITF-NIM 664
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEG 594
+ + K G EDA + A+ + Y V E+ EG
Sbjct: 665 IGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEG 707
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/370 (21%), Positives = 142/370 (38%), Gaps = 42/370 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ++Y+ ++ V +N+ EM G D+ TY + K ++ + A +F
Sbjct: 202 NVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVF 261
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+D KP++ + L+ SI V R+ + + G + Y + L
Sbjct: 262 QQMIDNGVKPNIDTYNCLIHGYLSIGK--WKEVVRMLEEMSAGGPKPNCCTYGSLLNYLC 319
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC------------------------- 419
K GR EA +M G +P TY ++ G
Sbjct: 320 KNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHH 379
Query: 420 ----------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
K G + A ++ ++M + G PD ++ LI C VD A + F +M
Sbjct: 380 IFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQM 439
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + D + L+ G + + +L EM+ V + P F T++ L R
Sbjct: 440 INEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEML-NVGIHPNIVFFNTILCNLCKEGR 498
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKAL-SVKEYPSSAAYLQ 585
+ E L+ ++ P + I GT+++AS+ L+ + SV P S +Y
Sbjct: 499 VMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNT 558
Query: 586 VFESFFNEGR 595
+ + GR
Sbjct: 559 LLHGYCKAGR 568
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 149/374 (39%), Gaps = 35/374 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N IT+N ++ L + D ++ + G ++ TY + + +E+
Sbjct: 653 GLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEF 712
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLR-----------------------SISSINNPDLGLV 357
LF M P+ Q + L+R S+ + L +
Sbjct: 713 DSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISI 772
Query: 358 FRVANKYESLGNSLSKSVYDGIHRA-----LTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
F +++Y+ SL K Y ++ A + K R D+A + + M G PD +TY+
Sbjct: 773 FS-SDEYQHHAKSLPKK-YRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYN 830
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
++ GL + GRF +A + M + +I T+ I++ G C +N VD A F + K
Sbjct: 831 TILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 890
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ +++I L R A L I L P T++ + E L+ LEE
Sbjct: 891 GLQLNIITFNIMIGALLKGGRKEDAMDLFAA-IPANGLVPDVVTYRLVAENLIEEGSLEE 949
Query: 533 AMNLLRLMKKQNYP---PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
L M+K P V+ + + G + A +L L K + A+ S
Sbjct: 950 FDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEASTTSELIS 1009
Query: 590 FFNEGRH-YEAKDL 602
F+ G + + AK L
Sbjct: 1010 LFSRGEYQHHAKSL 1023
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ Y + ++G + + G+ D+I +Q++ GLC R +A +VL
Sbjct: 93 NRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVL 152
Query: 432 -DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLL--DVLING 487
M E GC+PD ++ IL++G C + AL M + + +++ +ING
Sbjct: 153 LQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVING 212
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F ++ +V+ Y L +EM+++ + P T+ T+I+ L A+ + A + + M P
Sbjct: 213 FFTEGQVDKPYNLFLEMMDR-GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKP 271
Query: 548 FPEPFVQYISKFGTVEDASEFLKAL----SVKEYPSSAAYLQVFESFFNEGRHYEAK 600
+ + I + ++ E ++ L + P+ Y + GR EA+
Sbjct: 272 NIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 10/223 (4%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNA---GFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ + + L R +EA +++ M + P+ ++YS VI G G+ + N+
Sbjct: 168 YNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFL 227
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + G PD+ T+T +I G C A DRA F +M++ + D + LI+G+LS
Sbjct: 228 EMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSI- 286
Query: 493 RVNGAYKLLVEMIEKVRL---RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
G +K +V M+E++ +P T+ +L+ L R EA M + P
Sbjct: 287 ---GKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSV 343
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
+ + + T SE L++ + +F FF+
Sbjct: 344 TTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFS 386
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 152/379 (40%), Gaps = 35/379 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K ++ +YN +L + + ++ +M G + TY I + + +A
Sbjct: 548 GLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEA 607
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L+ M++ K + +++L + N D + ++ S G L+ ++ +
Sbjct: 608 KELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAI--KMFQNLCSKGLQLNIITFNIMI 665
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR ++A + A+ G + +TY V+ L + G E+ ++ ME+NG
Sbjct: 666 GALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTA 725
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ--------- 491
P+ + L++ ++ RA +K+ E+N+ +A +LI+ F S
Sbjct: 726 PNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSL 785
Query: 492 -------------------KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+R++ AY L EM+ K L P T+ T++ L R E
Sbjct: 786 PKKYRILNEANSSALIKKARRIDDAYSLFREMLMK-GLTPDVVTYNTILHGLFQTGRFSE 844
Query: 533 AMNLLRLM---KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQV-FE 588
A L M + Q + + K V++A + ++L K + +
Sbjct: 845 AKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIG 904
Query: 589 SFFNEGRHYEAKDLLYKCP 607
+ GR +A DL P
Sbjct: 905 ALLKGGRKEDAMDLFAAIP 923
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 55/115 (47%)
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T++ILI C ++ F +++ + D +++ L+NG KRV A +
Sbjct: 92 PNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDV 151
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
L++ + ++ P ++ L++ L +R EEA+ LL +M P V Y
Sbjct: 152 LLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSY 206
>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 833
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 153/356 (42%), Gaps = 12/356 (3%)
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
V + G N +TYN ++ L R V N+ EM ++G D+ TY I K
Sbjct: 216 MVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKA 275
Query: 315 RMMEDAVKLFEFMMDGPYKPS--VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
R M+ A + M+ ++P+ +C + SIS G+ FR + N ++
Sbjct: 276 RAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGM-FREMTSQGLMPNIVT 334
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
+ Y +L K G+ EA + +M G +P+ +TYS ++ G G F D N+ +
Sbjct: 335 CNSY---MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFN 391
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
ME NG + D + + I+I + +D +L F +M E+ DA ++I F
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP----PF 548
R+ A +MI + L+P + +LI+ L +A L+ M + P F
Sbjct: 452 RLADAMDKFNQMI-AMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVF 510
Query: 549 PEPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ + K G V +A + + + E P + + + + G+ +A +L
Sbjct: 511 FNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVL 566
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 153/354 (43%), Gaps = 14/354 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G++ N +TYN ++ + ++ + EM +G +I T K ++
Sbjct: 291 NGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKE 350
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSL--SKSVY 376
A + F+ M +KP++ S+LL ++ G + N + S+ GN + + V+
Sbjct: 351 AAEFFDSMAAKGHKPNLVTYSVLLHGYAT-----EGCFVDMLNLFNSMEGNGIVADQRVF 405
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A K G DE + M+ G PD TY VI + GR DA + ++M
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD-ADADLLDVLINGFLSQKRVN 495
G P+ + LIQG C + +A ++MM + + + +IN + RV
Sbjct: 466 MGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVV 525
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A+ + + + + RP TF +LI+ ++E+A +L M P +
Sbjct: 526 EAHDIF-DFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTL 584
Query: 556 ISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I + G ++D F + LS P++ Y + FN+GR AK + ++
Sbjct: 585 IDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 22/355 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMED 319
G K I Y+ +++ H ++ +V EM G +I + I K + +
Sbjct: 467 GLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVE 526
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---- 375
A +F+F++ +P V + L+ GLV ++ + L +S +
Sbjct: 527 AHDIFDFVIHIGERPDVITFNSLIDG--------YGLVGKIEKAFGVLDAMISAGIEPDV 578
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ + + GR D+ + M + G +P ITY ++ GL GR A + E
Sbjct: 579 VSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHE 638
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M E+G DI T I++ G C N D A+ F K+ N + +++ +I+ ++
Sbjct: 639 MIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRK 698
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A K L + I L P +T+ +I+ LL +EEA N+ LM+K P +
Sbjct: 699 REEA-KELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAP-SSRLL 756
Query: 554 QYISKF----GTVEDASEFLKALSVKEYPSSAAYLQVFESFFN-EGRHYEAKDLL 603
YI + G + A ++ + K A+ + + + F+ EG+++E LL
Sbjct: 757 NYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 154/382 (40%), Gaps = 41/382 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K N +TY+ +L A D N+ M+ G D + + + K MM++
Sbjct: 362 GHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDET 421
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDLGLVFR---- 359
+ +F M + P +++ + S + P+ G+V+
Sbjct: 422 MLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPE-GIVYHSLIQ 480
Query: 360 -------VANKYESLGNSLSKSV-------YDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ E + +S+ + ++ I +L K GR EA + + + G
Sbjct: 481 GFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGER 540
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD IT++ +I G G+ E A VLD M G PD+ ++ LI G+C +D L+
Sbjct: 541 PDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLIL 600
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F +M+ K ++++G + R GA K+ EMIE +T ++ L
Sbjct: 601 FGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI-STCGIILGGLC 659
Query: 526 GARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSA 581
+EA+ + + + N + + K E+A E ++S P+++
Sbjct: 660 RNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNAS 719
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + ++ EG EA ++
Sbjct: 720 TYGVMIKNLLKEGSVEEADNMF 741
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 138/353 (39%), Gaps = 71/353 (20%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+ NG LAR S ++G + + + +I R+ + R+ V + +
Sbjct: 74 SLNGFFTALARAPS--------SAACRDGPSLAVALFNRICREEARPRVALPTVCTYNIL 125
Query: 328 MDG---PYKPSVQ-----------------DCSLLLRSISSINNPDLGLVFRVANKYESL 367
MD +P+V S+LL+ + D +V + ++ L
Sbjct: 126 MDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSD-DVVNLLLHRMPEL 184
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFE 425
G Y+ + + L + R A ++ M K+ G P+ +TY+ VI GL + G
Sbjct: 185 GVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVS 244
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
ACN+ EM + G +PD+ T+T +I C A +D+A L +M+
Sbjct: 245 KACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMIS-------------- 290
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NGF +P + T+ +I + + +E + R M Q
Sbjct: 291 NGF----------------------QPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGL 328
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
P Y+S K G ++A+EF +++ K + P+ Y + + EG
Sbjct: 329 MPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEG 381
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/266 (19%), Positives = 112/266 (42%), Gaps = 40/266 (15%)
Query: 232 DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
++ + ++ KE R+ V+A F +V H G + + IT+N ++ + + V++
Sbjct: 512 NSIINSLCKEGRV--VEAHDIFDFV-IHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDA 568
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS---------------- 335
M G E D+ +Y + + + ++D + LF M+ KP+
Sbjct: 569 MISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628
Query: 336 -------------------VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ C ++L + N D + + K ++ + ++
Sbjct: 629 TVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA--MFKKLGAMNVKFNIAII 686
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A+ K+ + +EA+++ ++ G P+ TY +I L K G E+A N+ ME+
Sbjct: 687 NTMIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEK 746
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRA 462
+GC P + +I+ E+ +A
Sbjct: 747 SGCAPSSRLLNYIIRVLLEKGEIVKA 772
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 107/510 (20%), Positives = 205/510 (40%), Gaps = 68/510 (13%)
Query: 69 SLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPS 128
S+ +L+ + L+ + EE S L V+ L+ ++D A +F + + K F+ +
Sbjct: 17 SIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKH-EHDITLALEYFKSIANSKSFKHT 75
Query: 129 STVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD-LAALN 187
Y +M+ L ++ + L++MK + E+ ++S++G ++A + L
Sbjct: 76 PLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFY 135
Query: 188 QFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV 247
+ D VK + ++D +L + I +MK
Sbjct: 136 RMQDFRVKPTV--KIYNHILDALLDENRFQMINPIYSNMK-------------------- 173
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY--- 304
G + N TYN +L+ L ++ V ++ EM +G + D +Y
Sbjct: 174 -----------KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTL 222
Query: 305 ---------IKISRQFQ------------------KFRMMEDAVKLFEFMMDGPYKPSVQ 337
+K +R+ K E+A +L + MM+ P+V
Sbjct: 223 ISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVI 282
Query: 338 DCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMK 397
+ ++ ++S N +L L V K + G S + + + + G EA
Sbjct: 283 SYTTIINALSDAGNVELSLA--VLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWD 340
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M G P+ + Y+ ++ GLC DA +V ++ME NGC P+++T++ LI G+ A
Sbjct: 341 RMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAG 400
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++D A + M+ + +++ N AY L+E ++ P TF
Sbjct: 401 DLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAY-CLIENMQVENCPPNTVTF 459
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T I+ L G+ R++ A+ + M P
Sbjct: 460 NTFIKGLCGSGRVDWAIKVFDQMGNSGCFP 489
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 196/463 (42%), Gaps = 44/463 (9%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY---LSILGVLKKAK 178
K P+ Y+++L+ L + + L M C +E +Y +S L L K K
Sbjct: 174 KDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVK 233
Query: 179 KASDLA--------ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDK------IGKKLE 224
+A +LA N +G+ KE + A L+D ++ D I L
Sbjct: 234 EARELAMSFTPSVPVYNALINGVCKEYTFEE-AFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 225 DM-KIELS-----DNFVLTVLKELRIYPVKALGFFRWVGEHS-----------GYKHNTI 267
D +ELS F L + GFF G H G N +
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN ++ L S+ D +V +M+ G ++ TY + + K ++ A +++ +M
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 328 MDGPYKPSV--QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-YDGIHRALT 384
+ P+V C + + +S+ N L+ + + N +V ++ + L
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM-----QVENCPPNTVTFNTFIKGLC 467
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
GR D A K+ M N+G P+ TY++++ L K RF +A ++ +ME G ++
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLV 527
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ +I G+C A + AL KM+ + DA ++++I+ + Q +VN A +L+ +
Sbjct: 528 TYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLM-DR 586
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + P + +LI + +EEA+ LR M + P
Sbjct: 587 LSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 177/416 (42%), Gaps = 43/416 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL +F+ + +KH +TY ++ LA + ++++MK EG D +I +
Sbjct: 59 ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVI 118
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+++ E A+K F M D KP+V+ + +L ++ ++ ++ + + + G
Sbjct: 119 GSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL--LDENRFQMINPIYSNMKKDG 176
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR----- 423
+ Y+ + +AL K R D A K++ M + G +PD ++Y+ +I LCK G+
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236
Query: 424 -------------------------FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
FE+A +LDEM G P++ ++T +I A
Sbjct: 237 ELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGN 296
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
V+ +L AKM + + LI GF + + A MI + + P +
Sbjct: 297 VELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIRE-GVVPNVVAYN 355
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK-ALSV 574
L+ L R L +A+++ M+ P + I +K G ++ ASE ++
Sbjct: 356 ALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415
Query: 575 KEYPSSAAYLQVFE-----SFFNEGRHYEAKDLLYKC-PHHIRQDSKISLLFGSAK 624
+P+ AY + + S FN+ + C P+ + ++ I L GS +
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 108/249 (43%), Gaps = 3/249 (1%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+ W+ H G N + Y ++ VL R+ + ++E M+ E + T+ +
Sbjct: 409 WNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLC 467
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
++ A+K+F+ M + P+ + LL S+ + + G F + E G L+
Sbjct: 468 GSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSL--LKDRRFGEAFGLVKDMEHRGIELN 525
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ I G EA +++ M G +PD IT + VI CK G+ A ++D
Sbjct: 526 LVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMD 585
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+ PDI +T LI G C V+ A++ +M+ + + +VL+ S
Sbjct: 586 RLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNM 645
Query: 493 RVNGAYKLL 501
+GA + L
Sbjct: 646 GHSGAVQFL 654
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 112/511 (21%), Positives = 204/511 (39%), Gaps = 48/511 (9%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMK-EDHCYIEEETYL 168
E+A F+ + + P Y+ ++ + RR+K E C ++
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD 165
Query: 169 SILGVLKKAKKASDLAALNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMK 227
+++ L K +A+D AL F + + + D NV TL+ + + L M
Sbjct: 166 TLVIFLCKMSRATD--ALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMT 223
Query: 228 IELS--DNFVLTVL--KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR----- 278
D F +L R + + F + H G + + YN I++ R
Sbjct: 224 AHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLA 283
Query: 279 -----------HESVRDFWN------------------VVEEMKKEGYEMDIDTYIKISR 309
ESV D + + +E ++ G +D+ TY +
Sbjct: 284 EATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMD 343
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN 369
F K A+++F M P ++L+ + D L + G
Sbjct: 344 AFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEAL--ELLEDMNRKGI 401
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
Y+ + L+ GR+++A MK PD +TY+ ++ GL K R ++AC+
Sbjct: 402 MPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 461
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ DEM+ N C+PD+ T+ LI A ++ AL A++++ + ++ + + LI+GF
Sbjct: 462 LFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC 521
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+V+ Y+L +MIE P T+ L+ AM LL+ M ++ + P
Sbjct: 522 RSGQVDKGYELFQDMIE-CSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPAL 580
Query: 550 EPF---VQYISKFGTVEDASEFLKALSVKEY 577
+ ++ +S G VEDA K + K +
Sbjct: 581 ATYNVLIRSLSMAGQVEDAYTLFKEMIAKGF 611
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 149/343 (43%), Gaps = 8/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ TY ++ R + + + +E + +G + Y I + F + + +A +LF
Sbjct: 230 DAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLF 289
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E M P V +LL+ S + +F+ A E G L Y + A
Sbjct: 290 ESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEA---EQGGVVLDVFTYSYLMDAFG 346
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR +A ++ M+ AG PD + Y+ +I L K G+ ++A +L++M G +PD +
Sbjct: 347 KAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 406
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ I+I + ++A F M + + D + L+NG +R + A L EM
Sbjct: 407 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 466
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GT 561
+ + P TF TLI+ L A R+E+A+ + K + P + IS F G
Sbjct: 467 -QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQ 525
Query: 562 VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
V+ E F + +P S Y + F G A +LL
Sbjct: 526 VDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELL 568
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 103/222 (46%), Gaps = 8/222 (3%)
Query: 268 TYNGILRVLA---RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
TYN ++ VL+ R+E F+ + MK+ + D+ TY + +K R ++A LF
Sbjct: 407 TYNIVIDVLSSCGRYEKAYSFFGM---MKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLF 463
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M P + L+ +++ + L + + +G++ + +Y+ +
Sbjct: 464 DEMQANKCMPDLTTFGTLIDTLAKAGRMEDAL--EQSARLVKMGHAPNSYIYNALISGFC 521
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G+ D+ ++ + M PD+ITY+ ++ G + G A +L EM G P +
Sbjct: 522 RSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALA 581
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
T+ +LI+ A +V+ A F +M+ K ++ D L N
Sbjct: 582 TYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALPN 623
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 143/355 (40%), Gaps = 21/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY-EMDIDTYIKISRQFQKFRMMED 319
G + +T ++ R + ++++M++ + + D + + R +E
Sbjct: 48 GVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQ 107
Query: 320 AVKLFEFMMDG-PYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSV-Y 376
A+ LF+ M + P V + L+ + D L +FR + + G+ +V +
Sbjct: 108 AMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFR---RLKQEGSCKPNAVSF 164
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
D + L K+ R +A + + M AG + D + +I C+ G A +L M
Sbjct: 165 DTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTA 224
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV----LINGFLSQK 492
+ C D T+ IL+ HC A ++ A ME L V +I GF+
Sbjct: 225 HACARDAFTYGILVNAHCRAGQMHEV----ASFMELARHDGCALSAVNYNFIIQGFIRCG 280
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
R+ A +L + K + P T+ LI L +++LEEA+ L + ++ +
Sbjct: 281 RLAEATQLFESTMTKESV-PDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTY 338
Query: 553 VQYISKFGTVEDASEFLKAL----SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ FG A++ L+ P + Y + +G+ EA +LL
Sbjct: 339 SYLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELL 393
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGC 439
+ + KLGR + +++ ++ G +T ++ I +AG + A +LD+M N C
Sbjct: 26 KEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFC 85
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGA 497
PD +T + C V++A+ F M E D D++ + LI G+ + A
Sbjct: 86 QPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRE-TCDCAPDVVAYNTLIAGYCKAGDGDRA 144
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ + ++ +P +F TL+ L R +A+ + + M
Sbjct: 145 LDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQEM 187
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 25/206 (12%)
Query: 160 CYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA---------KTLVDVV 210
C E+ Y S G++K+ K + D+ N +G+ K D K + D+
Sbjct: 418 CGRYEKAY-SFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLT 476
Query: 211 LGSDWDDKIGK--KLEDMKIELSDNFV-LTVLKELRIYPVKALGFFRWVGEHSGYK---- 263
D + K ++ED +E S V + IY GF R GY+
Sbjct: 477 TFGTLIDTLAKAGRMED-ALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQD 535
Query: 264 -------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
++ITY ++ +R +++EM +EG+ + TY + R
Sbjct: 536 MIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQ 595
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLL 342
+EDA LF+ M+ + P +Q S L
Sbjct: 596 VEDAYTLFKEMIAKGFNPDMQTYSAL 621
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 205/512 (40%), Gaps = 56/512 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K P+ Y+L++R L D + L M C+ +E ++ +I+
Sbjct: 150 KAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV---------- 199
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-K 240
GM K LG ++ G E + ++ S N V+ L
Sbjct: 200 ---------SGMCK---------------LGR-VEEARGFLAETVPVQASYNAVVHALCG 234
Query: 241 ELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
E R++ V F V E G + N +TY I+ + +R ++ M G
Sbjct: 235 EFRMWEV-----FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 289
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ T+ + + F + + DA+ ++ +M+D + PS ++L+R + I + L F
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ K +L + + Y + + G D A + MK++G +P+ + Y+ +I L
Sbjct: 350 FNSMKRNAL--LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 407
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK F+ A +++D+M + C P+ T+ LI C V RAL F M +
Sbjct: 408 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 467
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ L++G + A+ +++EM+ T+ T+I L + AM LL
Sbjct: 468 RTYNELLHGLFREGNHKDAFAMVIEMLNN-GFELSLVTYNTVINCLCQMCMRKHAMLLLG 526
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEG 594
M Q P F I + G V A+ L ++ P + AY + N+G
Sbjct: 527 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 586
Query: 595 RHYEAKDLLYK------CPHHIRQDSKISLLF 620
+ A L K CP+ + + +F
Sbjct: 587 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 618
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 142/372 (38%), Gaps = 49/372 (13%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN +L L R V V + M+K G + ++ TY + R + ++ A K+ + M
Sbjct: 124 VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 183
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS-KSVYDGIHRALTKL 386
P ++ + + RV L ++ ++ Y+ + AL
Sbjct: 184 SRKGCHPDEVSHGTIVSGMCKLG--------RVEEARGFLAETVPVQASYNAVVHALCGE 235
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R E ++ M G +P+ +TY+ ++ CKA AC +L M GC P++ T+
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T L++G +V AL + M+++ + +VLI G + GA M +
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-K 354
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP------------------- 547
+ L P T+ TL++ A L+ AM + MK P
Sbjct: 355 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 414
Query: 548 -------------FPEPFVQYISKFGTVEDASEFLKALSV-------KEYPSSAAYLQVF 587
P V + + G + D +AL+V +P+ Y ++
Sbjct: 415 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 474
Query: 588 ESFFNEGRHYEA 599
F EG H +A
Sbjct: 475 HGLFREGNHKDA 486
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAG----FEPDNITYSQVIFGLCKAGRFEDACNVLD 432
D + A+ R A++ +K A +P Y+ ++ L + V D
Sbjct: 87 DALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYD 146
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M + G P++ T+ +LI+ C + VD A +M K D +++G
Sbjct: 147 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 206
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
RV A L E + P QA++ ++ L G R+ E +++ M ++ P +
Sbjct: 207 RVEEARGFLAETV------PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTY 260
Query: 553 VQYISKFGTVED----ASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ F + + + +S+ P+ + + + FF +G+ ++A
Sbjct: 261 TTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 311
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K N + Y ++ VL + +++++M + + T+ + + +
Sbjct: 391 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 450
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSI-SSINNPD-LGLVFRVANKYESLGNSLSKSVYD 377
A+ +F M P+ + + LL + N+ D +V + N G LS Y+
Sbjct: 451 ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN----GFELSLVTYN 506
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L ++ A ++ M G +PD T++ +I CK G+ A +L +M
Sbjct: 507 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 566
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C ++ +TILI C ++ A++ KM+ + + +VL+ + G
Sbjct: 567 NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGP 626
Query: 498 YKLLVEMIE 506
L ++E
Sbjct: 627 IHLFKYIVE 635
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 152/307 (49%), Gaps = 12/307 (3%)
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+LK + + V ALGFF W+ ++H+ TY ++ +L R + ++++M K+G
Sbjct: 352 ILKRVDDHAV-ALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGC 410
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLL-LRSISSINNPDLG 355
+ ++ TY +I + + ++DAV +F+ M + +P V C+L+ + + S + +G
Sbjct: 411 QPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMG 470
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ K + G + Y + L K G + A ++ M + G P+ +TY+ +I
Sbjct: 471 MY----EKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMI 526
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ--GHCAANEVDRALLCFAKMMEKN 473
KA +E A + +M+++G PD T+ I+++ GHC E + F +M +KN
Sbjct: 527 ALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGI--FIEMQKKN 584
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ D + +L++ + V A++ M+ K L+P T +L+ L +L +A
Sbjct: 585 WVPDEPVYGLLVDLWGKSGNVQKAWEWYHAML-KAGLKPNVPTCNSLLSAFLRVHQLSDA 643
Query: 534 MNLLRLM 540
LL+ M
Sbjct: 644 YQLLQSM 650
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 81/165 (49%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +DA NV +M+E GC PD
Sbjct: 389 LGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPD 448
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H + +D A+ + KM + D V+IN +N A++L
Sbjct: 449 RVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFC 508
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
M+++ + P T+ +I AR E A+ L R M++ + P
Sbjct: 509 RMVDEGCV-PNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEP 552
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 93/422 (22%), Positives = 157/422 (37%), Gaps = 68/422 (16%)
Query: 62 FSTSPN--SSLELILA-CDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNW 118
F +PN S+ IL W E + +L+ + +L+++D D A FF W
Sbjct: 310 FLNAPNVVESVSCILQQLKWGPAAEEAIGKLNCSIDAYQANQILKRVD-DHAVALGFFYW 368
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK 178
+ +FR Y+ M+ L L +M +D C TY I+ +A
Sbjct: 369 LKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRAN 428
Query: 179 KASDLAALNQFHDGMVKEIAMDNVAK-TLVDVVLGSDW-DDKIG--KKLEDMKIELSDNF 234
D A+N F D V TL+D+ S + D +G +K++D + D F
Sbjct: 429 YLQD--AVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLT-PDTF 485
Query: 235 VLTVLKELRIYPVKALG-----------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
+V+ + LG F R V E G N +TYN ++ + A+ +
Sbjct: 486 TYSVM-------INCLGKAGHLNAAHRLFCRMVDE--GCVPNLVTYNIMIALQAKARNYE 536
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ +M++ G+E D TY + +E+A +F M + P
Sbjct: 537 IALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP--------- 587
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ P GL+ + K G +A + AM AG
Sbjct: 588 ------DEPVYGLLVDLWGKS----------------------GNVQKAWEWYHAMLKAG 619
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+P+ T + ++ + + DA +L M G P ++T+T+L+ A D
Sbjct: 620 LKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLSCCTDAQTNDMGF 679
Query: 464 LC 465
C
Sbjct: 680 CC 681
>gi|255561709|ref|XP_002521864.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538902|gb|EEF40500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 428
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 173/394 (43%), Gaps = 38/394 (9%)
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
DNVA VV+ S + + K L + +EL+ + V+ VL LR A FF W G
Sbjct: 42 DNVADKTYAVVMESS--NHMEKALNQLNLELTTDLVVEVLLRLRFEEKIAFRFFMWAGRQ 99
Query: 260 SGYKHNTITYNGILRVLA----RHESVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKF 314
Y H YN ++ +L+ + + R ++++ MK+ + ++ + I R + +
Sbjct: 100 QNYTHEPCAYNEMMDILSSTKYKVKQFRIVCDMLDYMKRNNKNIVPVEVLLTILRNYTQK 159
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ + + +P + +LLL ++ SL +
Sbjct: 160 YLTHVQKFAKKKRIRVKTQPEINAFNLLLDALCKC--------------------SLVED 199
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
R K R DE K++ M N+G PD TY +++ G+C AG+ ++A VL EM
Sbjct: 200 AETIFKRVKNKNDRMDECSKLLGHMINSGCLPDVSTYKELMEGMCLAGKIDEAYRVLQEM 259
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
G PDI T+ ++ C + D AL + +M+E + ++LI+ +
Sbjct: 260 GNKGYPPDIVTYNCFLKVLCENMKSDEALRLYGRMIEVDCLPSVQTYNMLISMYFEMGDP 319
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFP--EP 551
+GA+ EM + + T+ +I+ L G ++++A L+ +M K P+ +
Sbjct: 320 DGAFDTWDEMHNRGCAKDID-TYSVMIDGLFGCNKVQDACLLIEDVMTKGMKLPYQKFDS 378
Query: 552 FVQYISKFG---TVEDASEFLKALSVKEYPSSAA 582
F+ +S+ G T+ SE ++ K Y SS A
Sbjct: 379 FLMKLSEIGDLQTIHKLSEHMR----KYYNSSMA 408
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 175/412 (42%), Gaps = 24/412 (5%)
Query: 237 TVLKELRI--YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV---RDFWNVVEE 291
TVL+ LR+ P L FF WV + G+ H ++ +L L R ++ R+F +E+
Sbjct: 73 TVLQTLRLIKVPADGLRFFDWV-YNKGFSHKEQSFFLMLEFLGRARNLNAARNFLFSIEK 131
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
++ + + R + + +++V LF+ M PSV + LL + +
Sbjct: 132 RSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSIL--LKR 189
Query: 352 PDLGLVFRVANKYE-SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ + ++ + G + ++ + K D+A + K M+ PD +T
Sbjct: 190 GRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVT 249
Query: 411 YSQVIFGLCKAGRFEDACNVLDEM--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
Y+ +I GLC+AG+ + A N+L+ M + P+I ++T L++G+C E+D ALL F +
Sbjct: 250 YNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHE 309
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M+ + +A + LI G R + L+ P TF LI+ A
Sbjct: 310 MLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAG 369
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-------- 577
L+ AM + + M P + I + A L KE
Sbjct: 370 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECK 429
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQD--SKISLLFGSAKSNK 627
P +AAY +FE G+ +A+ + + QD S +L+ G + K
Sbjct: 430 PLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPSSYRTLITGLCREGK 481
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 143/313 (45%), Gaps = 12/313 (3%)
Query: 261 GYKHNTITYNGILRVLA---RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
G K N +TYN +++ L+ R++ ++ F ++ + D T+ + + +
Sbjct: 314 GLKPNAVTYNTLIKGLSEAHRYDEIKGF--LIGGDAFTTFSPDACTFNILIKAHCDAGHL 371
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSK-- 373
+ A+K+F+ M++ P S+L+R++ N D L + K LG + K
Sbjct: 372 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPL 431
Query: 374 -SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
+ Y+ + L G+ +AEK+ + + G + D +Y +I GLC+ G+F+ A +L
Sbjct: 432 AAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQ-DPSSYRTLITGLCREGKFKAAYELLV 490
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M +PD +T+ +LI G E A +M+ +Y A ++ + +K
Sbjct: 491 LMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRK 550
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
N ++ LL M+EK R+R + + + + E+A ++RL+ Y E
Sbjct: 551 FANDSFGLLTVMLEK-RIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLIKMEEL 609
Query: 553 VQYISKFGTVEDA 565
+ ++ + + DA
Sbjct: 610 LDFLCENRKLLDA 622
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 164/361 (45%), Gaps = 25/361 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T + ++ +L + V + ++E + + G D+ T + + + A
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKA 426
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLG-----NSLSK 373
+LF M P+V C+ L++ + N + L + + G N++S
Sbjct: 427 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 486
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S+ I L K GR DEA ++ K MK G PD I+Y+ +I G C++G+++DA + +E
Sbjct: 487 SI---IIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + G PD+ T+++LI C +V A M+++ + L+ G R
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDR 603
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM---KKQNYPPFPE 550
++ A +L ++M +K+ P T+ TL++ L ++ A+ L + M Q F
Sbjct: 604 ISEATQLFMKM-QKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 551 PFVQY------ISKFGTVEDASEF---LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
+ Y + K G ++A E +KAL V P+ +Y + F G+ +AK
Sbjct: 663 DVISYSIIIDGLCKHGREDEARELFKEMKALGV--IPNVISYTSLIHGFCRSGKLEDAKH 720
Query: 602 L 602
L
Sbjct: 721 L 721
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 155/393 (39%), Gaps = 48/393 (12%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H G + + T ++ + + V + ++E M + G +DI TY + + +
Sbjct: 3 HVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRIS 62
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLGNSLSKSV- 375
+A +LF M +P L++ + ++ L + N G ++
Sbjct: 63 EATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLV 122
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA------- 427
Y I L K R DEA ++ K MK G PD I+Y+ +I G C++G++E A
Sbjct: 123 SYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEM 182
Query: 428 -------------------CN---------VLDEMEENGCIPDIKTWTILIQGHCAANEV 459
C +L+ M + GCI DI T++ LI+G C + +
Sbjct: 183 LDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRI 242
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE-----KVRLRPWQ 514
A F M + DA L+ G +N A +L EM+ ++ +P
Sbjct: 243 SEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTL 302
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA-SEFLK 570
++ +I+ L RR +EA L + MK Q P + I F G E A F +
Sbjct: 303 ISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNE 362
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
L V P + + +G+ EA LL
Sbjct: 363 MLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLL 395
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 157/358 (43%), Gaps = 19/358 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T + ++ +L + V + ++E M + G +DI TY + + + +A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR--VANKYESLGNSLSKSV--Y 376
+LF M +P L++ + N + L + N G ++ Y
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K R DEA ++ K MK G PD I+Y+ +I G C +G++E A + +EM +
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ T ++LI C +V A ++++ D L+ G + R++
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP------PFPE 550
A +L ++M +K+ P T TL++ L + ++ A+ L + M P P
Sbjct: 426 ATQLFLKM-QKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAI 484
Query: 551 PF---VQYISKFGTVEDASEF---LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + + K G ++A E +KAL V P +Y + F G+ +AK L
Sbjct: 485 SYSIIIDGLCKCGREDEARELFKEMKALGV--IPDVISYTSLIHGFCRSGKWKDAKYL 540
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/394 (22%), Positives = 157/394 (39%), Gaps = 60/394 (15%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K ++Y+ I+ L + + + +EMK +G D+ +Y + F + E A
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGI 379
LF M+D + V S+L+ + G V E + G L Y +
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCK-----EGKVIEANELLEVMIQRGCILDIVTYSTL 232
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG----------------- 422
+ L R EA ++ +M+ G PD I Y ++ GLC+ G
Sbjct: 233 IKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTG 292
Query: 423 ------------------------RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
R ++A + EM+ G +PD+ ++T LI G C + +
Sbjct: 293 RYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGK 352
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
++A F +M++ D VLI+ + +V A KLL +I++ + P T
Sbjct: 353 WEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCI-PDVVTCT 411
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL--- 572
TL++ L R+ +A L M+K P ++ + + G ++ A E K +
Sbjct: 412 TLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSD 471
Query: 573 ----SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ P++ +Y + + GR EA++L
Sbjct: 472 TSPYGINCKPNAISYSIIIDGLCKCGREDEAREL 505
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 102/213 (47%), Gaps = 6/213 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + T++ ++ +L + V + ++E M + G + TY + + + +A
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF--RVANKYESLGNSLSKSV--Y 376
+LF M P V L++ + N L ++ + G + V Y
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L K GR DEA ++ K MK G P+ I+Y+ +I G C++G+ EDA ++ +EM +
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
G + T++++I G C ++D+AL F KM
Sbjct: 728 QGVQLNAVTYSVMIHGFCKEGQIDKAL--FQKM 758
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 8/243 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + I+Y ++ R +D + EM G + D+ T+ + K + +A
Sbjct: 513 GVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEA 572
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L E M+ P+ + L++ + N + ++ K + LG Y +
Sbjct: 573 NELLEVMIQRGCIPNTVTYTTLVKGLCM--NDRISEATQLFMKMQKLGCLPDVVTYGTLM 630
Query: 381 RALTKLGRFDEAEKMMKAM------KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ L + G A ++ K M F+PD I+YS +I GLCK GR ++A + EM
Sbjct: 631 KGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEM 690
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G IP++ ++T LI G C + +++ A F +M+++ +A V+I+GF + ++
Sbjct: 691 KALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQI 750
Query: 495 NGA 497
+ A
Sbjct: 751 DKA 753
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + G +PD T +I CK G+ +A +L+ M + GCI DI T++ LI+G C +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE-----KVRLRPW 513
+ A F M + DA L+ G ++N A L EM+ ++ +P
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA-SEFL 569
++ +I+ L RR +EA L + MK Q P + I F G E A F
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ L V + + EG+ EA +LL
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELL 214
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 136/290 (46%), Gaps = 9/290 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ R ++ + +VE+M+ EG +I T I + A
Sbjct: 241 GCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAA 300
Query: 321 VKLFE----FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ F +G K + S L+ ++ NN +G+ + ++ S G+S +Y
Sbjct: 301 LEFFREKRTVWPEG--KGNAVTYSTLVGALLHTNN--VGMAMELFHEKMSEGHSPDAIMY 356
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ LT+ GR ++A M +MK AGF+ D Y+ +I G C+ R +A +L EM+E
Sbjct: 357 FTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKE 416
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ T+ L+ G C A + KM++ L++G+ +++
Sbjct: 417 VGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDE 476
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
A ++L M E + P + TLI+ L ++ A+ L MK+++ P
Sbjct: 477 ALRILRSMDES-GIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVP 525
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 115/260 (44%), Gaps = 3/260 (1%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K N +TY+ ++ L +V + E EG+ D Y + + +EDA
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACS 374
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+ M + +K + ++L+ L + + + + +G Y+ +
Sbjct: 375 MASSMKEAGFKLDTKAYNILIAGFC--RKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
K G F ++++ M + G +P IT+ ++ G CK G+ ++A +L M+E+G P+
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI C +VD A+ F +M EK+ A+ + L+ G + A++L+
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMD 552
Query: 503 EMIEKVRLRPWQATFKTLIE 522
+M E+ R P T L+E
Sbjct: 553 QMREE-RCFPDYVTVDVLME 571
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 98/228 (42%), Gaps = 37/228 (16%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ +G+K +T YN ++ R + + + + +++EMK+ G D+ TY + K
Sbjct: 380 KEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDF 439
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+L M+D +PSV +
Sbjct: 440 AAVDELLGKMIDDGCQPSV-------------------------------------ITFG 462
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K+G+ DEA +++++M +G P+N+ Y+ +I LCK G + A + DEM+E
Sbjct: 463 TLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ T+ L++G N ++A +M E+ D +DVL+
Sbjct: 523 SVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLM 570
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 100/237 (42%), Gaps = 14/237 (5%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
++ I AL ++ ++ M+ A PD +TY ++ GLCKAGR DA VLD
Sbjct: 138 AFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDG 197
Query: 434 M--EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFL 489
M ++ PD+ T ++ G C + V AL + M + + + + LI+ F
Sbjct: 198 MSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAFC 257
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
++ AY+ LVE +E + T T++ L A R A+ R K+ +P
Sbjct: 258 RVGNISMAYE-LVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFR-EKRTVWPEGK 315
Query: 550 EPFVQYISKFGT------VEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
V Y + G V A E F + +S P + Y + GR +A
Sbjct: 316 GNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 123/287 (42%), Gaps = 3/287 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G +T+ Y ++ + +R EM D+ TY I F + M +A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M +P + L+ + + FRV N G S + Y +
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGH--MKDAFRVHNHMIQAGCSPNVVTYTTLI 463
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G D A +++ M G +P+ TY+ ++ GLCK+G E+A ++ E E G
Sbjct: 464 DGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D T+T L+ +C + E+D+A +M+ K +VL+NGF + KL
Sbjct: 524 ADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKL 583
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L M+ K + P TF +L+++ L+ A + + M + P
Sbjct: 584 LNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 173/423 (40%), Gaps = 40/423 (9%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVE 290
S N LT L + A+ FR E G N +YN ++ + + +++ +++
Sbjct: 212 SCNVYLTRLSKDCYKTATAIIVFREFPE-VGVCWNVASYNIVIHFVCQLGRIKEAHHLLL 270
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
M+ +GY D+ +Y + + +F ++ KL E M KP+ ++ + I
Sbjct: 271 LMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRIC 330
Query: 351 N-----------------PDLGLV------------FRVANK--YESLGNSLSKSV--YD 377
PD + R A+K YE ++ V Y
Sbjct: 331 KLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYT 390
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I ++G EA K+ M G EPD++T++++I G CKAG +DA V + M +
Sbjct: 391 AIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P++ T+T LI G C ++D A +M + + + ++NG + A
Sbjct: 451 GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEA 510
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
KL+ E E L T+ TL++ + +++A +L+ M + P F ++
Sbjct: 511 VKLVGEF-EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 558 KF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK--CPHHIRQ 612
F G +ED + L + K +A + + +A +YK C +
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGP 629
Query: 613 DSK 615
D K
Sbjct: 630 DGK 632
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 131/298 (43%), Gaps = 10/298 (3%)
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSL 371
F ++ +A ++FE M++ SV C++ L +S +VFR ++ +G
Sbjct: 188 FGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFR---EFPEVGVCW 244
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ + Y+ + + +LGR EA ++ M+ G+ PD I+YS V+ G C+ G + ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+ M+ G P+ + +I C ++ A F++M+ + D + LI+GF +
Sbjct: 305 EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKR 364
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A K EM + + P T+ +I + EA L M + P
Sbjct: 365 GDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 552 FVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
F + I+ + G ++DA + P+ Y + + EG A +LL++
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHE 481
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 107/249 (42%), Gaps = 8/249 (3%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G N +TY ++ L + + ++ EM K G + +I TY I K +E
Sbjct: 449 QAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIE 508
Query: 319 DAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
+AVKL EF G +V +L+ S + + E LG L ++
Sbjct: 509 EAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK-----EMLGKGLQPTIVT 563
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + G ++ EK++ M G P+ T++ ++ C + A + +M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD KT+ L++GHC A + A F +M K + VLI GFL +K+
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 496 GAYKLLVEM 504
A ++ +M
Sbjct: 684 EAREVFDQM 692
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 107/246 (43%), Gaps = 2/246 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN I+ L + ++ + +V E + G D TY + + K M+ A
Sbjct: 486 GLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKA 545
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ + M+ +P++ ++L+ + G ++ N + G + + + ++ +
Sbjct: 546 QEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE--KLLNWMLAKGIAPNATTFNSLV 603
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ A + K M + G PD TY ++ G CKA ++A + EM+ G
Sbjct: 604 KQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFS 663
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+++LI+G + A F +M + AD ++ D + KR +
Sbjct: 664 VSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDP 723
Query: 501 LVEMIE 506
+ E+IE
Sbjct: 724 IDEIIE 729
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 155/361 (42%), Gaps = 10/361 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 37 ASAVFAAILETKGTQRSDIXVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 96
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYES 366
K + + ++ +++ Y S+ ++L+ N + VF K+
Sbjct: 97 LEHLMKLKYFKLVWGFYQEILECGYPASLYFFNILMHRFCKEGNIRVAQSVFDAITKW-- 154
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + ++
Sbjct: 155 -GLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDE 213
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + DEM G +P T+T LI GHC VD A+ + +M+ ++ D + LI
Sbjct: 214 ANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIY 273
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + A+ L+ EM K +P + T+ TLI+ L+ A + M ++N
Sbjct: 274 GLCKKGBLKQAHVLIXEMSLK-GXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 332
Query: 547 PFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ IS G DA + L+ LSV P + Y + F +G + L
Sbjct: 333 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKL 392
Query: 603 L 603
L
Sbjct: 393 L 393
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 97/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M++A
Sbjct: 155 GLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKEXKMDEA 214
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P + L+ DL + +SL L Y+ +
Sbjct: 215 NELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 272
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 273 YGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 332
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 333 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKL 392
Query: 501 LVEM 504
L EM
Sbjct: 393 LKEM 396
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 44/82 (53%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKM++ M + G +PD TY+ +I CK G +
Sbjct: 333 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGXKPDTRTYTMIINEFCKKGDVWTGSKL 392
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ +G +P + T+ +L+ G
Sbjct: 393 LKEMQRDGHVPSVVTYNVLMNG 414
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 157/346 (45%), Gaps = 10/346 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E+SG + ITYN ++ + + V+E M D+ TY I R +
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMS---VAPDVVTYNTILRSLCDSGKL 225
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A+++ + M P V ++L+ + + N+ +G ++ ++ G Y+
Sbjct: 226 KEAMEVLDRQMQRECYPDVITYTILIEA--TCNDSGVGQAMKLLDEMRKKGCKPDVVTYN 283
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K GR DEA K + M G +P+ IT++ ++ +C GR+ DA +L +M
Sbjct: 284 VLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK 343
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P + T+ ILI C + RA+ KM + ++ + L++GF +K+++ A
Sbjct: 344 GCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRA 403
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L M+ + P T+ TL+ L + + A+ +L + + P + +
Sbjct: 404 IEYLEIMVSR-GCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVID 462
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
++K G E A+E L+ + K P Y + EG+ EA
Sbjct: 463 GLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 162/394 (41%), Gaps = 47/394 (11%)
Query: 119 VCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY----------- 167
V ++ P Y+ +LR+L + LK+ L R + CY + TY
Sbjct: 199 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDS 258
Query: 168 -----LSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ +L ++K D+ N +G+ KE +D K L ++ L + I
Sbjct: 259 GVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI--- 315
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE--------HSGYKHNTITYNGILR 274
+ N +L + RW+ G + +T+N ++
Sbjct: 316 --------THNIILRSM----------CSTGRWMDAERLLADMLRKGCSPSVVTFNILIN 357
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +V+E+M K G + +Y + F + + M+ A++ E M+ P
Sbjct: 358 FLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYP 417
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
+ + LL ++ D + + N+ S G S Y+ + LTK+G+ + A +
Sbjct: 418 DIVTYNTLLTALCKDGKADAAV--EILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAE 475
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+++ M+ G +PD ITYS ++ GL G+ ++A + +ME P T+ ++ G C
Sbjct: 476 LLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLC 535
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
A + RA+ A M+EK +LI G
Sbjct: 536 KAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 137/334 (41%), Gaps = 45/334 (13%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R+ + +E+ +K E M+ P V C+ L+R R+ E+ G
Sbjct: 115 RKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKAT--RIMEILENSG 172
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y+ + K G D+A ++++ M A PD +TY+ ++ LC +G+ ++A
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAM 229
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
VLD + C PD+ T+TILI+ C + V +A+ +M +K D +VLING
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289
Query: 489 LSQKRVNGAYK-----------------------------------LLVEMIEKVRLRPW 513
+ R++ A K LL +M+ K P
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRK-GCSPS 348
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDASEFLK 570
TF LI L R L A+++L M K P P + + ++ A E+L+
Sbjct: 349 VVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLE 408
Query: 571 AL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ S YP Y + + +G+ A ++L
Sbjct: 409 IMVSRGCYPDIVTYNTLLTALCKDGKADAAVEIL 442
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 143/319 (44%), Gaps = 40/319 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVE-EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ +TYN ILR L +++ V++ +M++E Y D+ TY + + A+KL
Sbjct: 208 DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYP-DVITYTILIEATCNDSGVGQAMKL 266
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M KP V ++L+ I D + F N G + ++ I R++
Sbjct: 267 LDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKF--LNNMPLYGCQPNVITHNIILRSM 324
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
GR+ +AE+++ M G P +T++ +I LC+ A +VL++M ++GC+P+
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384
Query: 444 KTWTILIQGHCAANEVDRAL---------LCFAKMMEKNY-----------DADADLLDV 483
++ L+ G C ++DRA+ C+ ++ N DA ++L+
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444
Query: 484 L---------------INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
L I+G + A +LL EM K L+P T+ TL+ L
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRK-GLKPDIITYSTLLRGLGCEG 503
Query: 529 RLEEAMNLLRLMKKQNYPP 547
+++EA+ + M+ + P
Sbjct: 504 KVDEAIKIFHDMEGLSIKP 522
>gi|356534139|ref|XP_003535615.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g60050-like [Glycine max]
Length = 480
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 148/333 (44%), Gaps = 12/333 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FF W + GY+H Y+ ++ + A E + W +V+EM ++G T+ +
Sbjct: 139 AYKFFVWCSQQEGYQHTVNAYHLVMNIYAECEEFKALWRLVDEMVEKGLPATARTFNILI 198
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R + + + V+ F ++P + +L + +N L + Y+ L
Sbjct: 199 RTCGEAGLAKSLVERFIKSKTFNFRPFKHSYNAILHGLLVLNQYKL-----IEWVYQQLL 253
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G S Y+ + A +LG+ D+ +++ M GF PD T++ ++ L K +
Sbjct: 254 LDGFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPL 313
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A N+L+ M E G P + +T LI G A +D F +M++ D V+I
Sbjct: 314 AALNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLDACKYFFDEMIKNGCIPDVVAYTVMI 373
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G++ + A K+ MI + ++ P T+ ++I+ L A + +EA ++L+ MK +
Sbjct: 374 TGYVVAGEIEKALKMYQYMISREQV-PNVFTYNSIIQGLCMAGKFDEACSMLKEMKTKGC 432
Query: 546 PP---FPEPFVQYISKFGTVEDASEFLKALSVK 575
P + G DA E ++ ++ K
Sbjct: 433 SPNSFVYNTLASCLRNAGKTADAHEVIRQMTEK 465
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 158/402 (39%), Gaps = 55/402 (13%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASA-----FFNWVCDKKQFRPSSTVYSLMLRNLVNKD 143
LS L E + +L+ ++ + + A FF W ++ ++ + Y L++ +
Sbjct: 111 LSGLLVREVLFGILKHINCENKTRCAKLAYKFFVWCSQQEGYQHTVNAYHLVMNIYAECE 170
Query: 144 SLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K W + M E L A + + +++ +A
Sbjct: 171 EFKALWRLVDEMVE-----------------------KGLPATARTFNILIRTCGEAGLA 207
Query: 204 KTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH---S 260
K+LV+ + S K + S N +L L L Y + WV +
Sbjct: 208 KSLVERFIKS-------KTFNFRPFKHSYNAILHGLLVLNQYKL-----IEWVYQQLLLD 255
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ + +TYN ++ R + F +++EM + G+ D T+ + K A
Sbjct: 256 GFSSDILTYNIVMYAKYRLGKLDQFHRLLDEMGRNGFSPDFHTFNILLHVLGKGDKPLAA 315
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY---ESLGNSLSKSV-- 375
+ L M + +P+V + L+ +S N D A KY E + N V
Sbjct: 316 LNLLNHMREMGIEPTVLHFTTLIDGLSRAGNLD-------ACKYFFDEMIKNGCIPDVVA 368
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + G ++A KM + M + P+ TY+ +I GLC AG+F++AC++L EM+
Sbjct: 369 YTVMITGYVVAGEIEKALKMYQYMISREQVPNVFTYNSIIQGLCMAGKFDEACSMLKEMK 428
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
GC P+ + L A + A +M EK AD
Sbjct: 429 TKGCSPNSFVYNTLASCLRNAGKTADAHEVIRQMTEKGKYAD 470
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 10/349 (2%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+K I Y+ I+ L + V + ++E+M + D TY I + K + ++DA+
Sbjct: 76 FKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDAL 134
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIH 380
E M KP + +L + + L+F K N ++ Y+ +
Sbjct: 135 ATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT---YNTLI 191
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K R + A ++ K M G+ P ++Y+ +I G CK A +V D+M + C+
Sbjct: 192 NGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCV 251
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T LI G + +V A M++K + LI+GF +RV+ A+KL
Sbjct: 252 PNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKL 311
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L +M+ + + P T+ L+ L A +LE+A L R M ++ P + ++ +
Sbjct: 312 LEQMVTQ-GIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALC 370
Query: 558 KFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDLLYK 605
++ A + K P A Y + G+ +EA++L+ K
Sbjct: 371 HHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 3/288 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + YN +L L + E V + + E+M K+ ++ TY + K +E A
Sbjct: 144 GIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETA 203
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M Y P+ + L+ DL V +K + Y +
Sbjct: 204 YELFKEMAGKGYVPTEVSYNTLIDGFC--KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+K G+ A +++ M G P+ TYS +I G CK R ++A +L++M G
Sbjct: 262 DGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIA 321
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P + T+ IL+ C A++++ A F M ++ + L+ K+++GA++L
Sbjct: 322 PTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRL 381
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
EMI K P T+ TL L A ++ EA L+ MK PF
Sbjct: 382 YAEMIAK-GCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRNPF 428
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 117/274 (42%), Gaps = 39/274 (14%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE---------------------- 405
G +L S Y + L K+G FDEA K++ M+ F+
Sbjct: 40 GYTLRASGYGILISCLCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEA 99
Query: 406 ------------PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
PD +TY ++ LCK R +DA ++EM G PD + ++ G
Sbjct: 100 RELIEKMARYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGL 159
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V+ A L F KM+++ + + + LING R+ AY+L EM K + P
Sbjct: 160 CQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYV-PT 218
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
+ ++ TLI+ + L A ++ M + N P + I SK G V+ A+E L
Sbjct: 219 EVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLD 278
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ K P+ A Y + + F R EA LL
Sbjct: 279 GMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLL 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 109/274 (39%), Gaps = 43/274 (15%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + +V DG +A GR ++ +++ + M AG+ Y +I LCK G F++A
Sbjct: 9 GAATFNTVADGFAKA----GRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEA 64
Query: 428 CNVLDEM--------------------------EENGCI--------PDIKTWTILIQGH 453
+L M E I PD T+ +++
Sbjct: 65 YKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPIVERL 124
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +D AL +M + DA + + +++G +++V A +LL E + K R+ P
Sbjct: 125 CKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA-RLLFEKMVKQRINPN 183
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FL 569
T+ TLI L A R+E A L + M + Y P + I F +D F
Sbjct: 184 VVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFD 243
Query: 570 KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K + P+ Y + + G+ A ++L
Sbjct: 244 KMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVL 277
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 58/143 (40%), Gaps = 4/143 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P T++ V G KAGR E V M E G + ILI C D A
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA-TFKTLIEKL 524
M K + A +IN RV A +L+ +M R P A T+ ++E+L
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM---ARYAPPDALTYGPIVERL 124
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
+R+++A+ + M + P
Sbjct: 125 CKTKRIDDALATVEEMATRGIKP 147
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 10/172 (5%)
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
IP T+ + G A +++ + M+E Y A +LI+ + AYK
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE-----PFVQ 554
LL M K R + + T+I L R+EEA L+ M + Y P P+ P V+
Sbjct: 67 LLHTMRLK-RFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR--YAP-PDALTYGPIVE 122
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K ++DA ++ ++ + P + Y V E + EA+ L K
Sbjct: 123 RLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEK 174
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 136/306 (44%), Gaps = 7/306 (2%)
Query: 302 DTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
DT K+ K + + +E +++ Y S+ ++L+ + D+ + V
Sbjct: 108 DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVF 165
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ G S Y+ + +LG +E ++ AM +G +PD TYS +I GLCK
Sbjct: 166 DAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKE 225
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ +DA + DEM G IP+ T+T LI GHC VD A+ + +M+ + D
Sbjct: 226 SKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITY 285
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
+ LI G + + A+ L+ EM K L+P + T+ TLI+ L+ A + M
Sbjct: 286 NTLIYGLXKKGDLKQAHDLIDEMSMK-GLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 542 KQNYPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHY 597
++N + IS G DA + L+ LSV P Y + F +G +
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVW 404
Query: 598 EAKDLL 603
+ LL
Sbjct: 405 KGSKLL 410
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + + L L Y+ +
Sbjct: 232 NELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD TY +I G CK G + A M +
Sbjct: 290 YGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDTAFEHRKRMIQENIRLDDVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M + G +PD+ TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 QEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/472 (23%), Positives = 205/472 (43%), Gaps = 53/472 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSI------LGVLKKAKKA 180
P + Y+ +L L K L + L MK + + T+ + LG LK+A +
Sbjct: 81 PDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEV 140
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV-LTVL 239
D+ A N + +V +T ++ G D KI D L D L +L
Sbjct: 141 IDIMARNN---------VLPDV-RTYTTLIGGLCKDGKI-----DEAFRLRDEMENLKLL 185
Query: 240 KELRIYPVKALGFFRWVG-----------EHSGYKHNTITYNGILRVLARHESVRDFWNV 288
+ Y + G F E G K N +TYN +++ + + + N
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI-- 346
+ +M++ G+ D T+ +S + K + +A + MMD + ++ S+ L +I
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFR----MMDEMSRKGLKMNSVTLNTILH 301
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR---FDEAEKMMKAMKNAG 403
+ L +++ + G + + Y + K+G+ +DE MK
Sbjct: 302 TLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDE-------MKEKE 354
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P ITY +I GLC++G+ + + + +E+ E+G +PD T+ +I G+C +VD+A
Sbjct: 355 IIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAF 414
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
KM++K++ D ++L+ G ++ ++ A KL I K + TF T+I
Sbjct: 415 HFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAID-AVTFNTIISG 473
Query: 524 LLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL 572
L R EEA +LL M+++ P + ++ G +++A EF+ +
Sbjct: 474 LCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI 525
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ EA ++ MK+ PDN++Y+ ++ LCK G+ +A ++L +M+ NG P+ T+
Sbjct: 63 KLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFN 122
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
IL+ G+C + A M N D LI G +++ A++L EM E
Sbjct: 123 ILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEM-EN 181
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVED 564
++L P T+ LI + L+ M+ + P + V++ K G +++
Sbjct: 182 LKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDN 241
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
A L+ + + P + + + GR EA
Sbjct: 242 AGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEA 277
>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
Length = 1096
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 159/377 (42%), Gaps = 12/377 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SGY +TYN +L + + +++ MK +G + D+ TY + + +
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
L M P+ + L+ S N + + ++ N+ S G S + ++
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFS--NEGKVLIASQLLNEMLSFGLSPNHVTFN 337
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ G F EA KM M+ G P ++Y ++ GLCK F+ A M+ N
Sbjct: 338 ALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 397
Query: 438 G-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G C+ I T+T +I G C +D A++ +M + D D LINGF R
Sbjct: 398 GVCVGRI-TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKT 456
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A K +V I +V L P + TLI L+EA+ + M + + F V
Sbjct: 457 A-KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLV 515
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG---RHYEAKDLLYKCPHH 609
+ K G V +A EF++ ++ P++ ++ + + N G + + D + K HH
Sbjct: 516 TSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHH 575
Query: 610 IRQDSKISLLFGSAKSN 626
+ SLL G K
Sbjct: 576 PTFFTYGSLLKGLCKGG 592
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 121/241 (50%), Gaps = 7/241 (2%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R + + M++D++++F M + PSV C+ +L S+ + D+ + + E L
Sbjct: 131 RVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVK-SGEDVSVWSFLK---EMLK 186
Query: 369 NSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ V ++ + L G F+++ +M+ M+ +G+ P +TY+ V+ CK GRF+
Sbjct: 187 RKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKA 246
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LD M+ G D+ T+ +LI C +N + + L M ++ + + LIN
Sbjct: 247 AIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLIN 306
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF ++ +V A +LL EM+ L P TF LI+ + +EA+ + +M+ +
Sbjct: 307 GFSNEGKVLIASQLLNEMLS-FGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365
Query: 547 P 547
P
Sbjct: 366 P 366
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 104/449 (23%), Positives = 175/449 (38%), Gaps = 72/449 (16%)
Query: 118 WVCDKKQFRPSSTVYSLMLRNLVNK---DSLKQFWVTLRRMKEDHCYIEEETYLSILGVL 174
++ + K PS Y ++L L D + F++ RMK + + TY ++ L
Sbjct: 357 YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYM---RMKRNGVCVGRITYTGMIDGL 413
Query: 175 KKAKKASDLAALNQFHDGMV---KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELS 231
K N F D V E++ D + +V + K+G+
Sbjct: 414 CK----------NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR---------- 453
Query: 232 DNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
KE+ RIY V G N I Y+ ++ R +++ +
Sbjct: 454 ----FKTAKEIVCRIYRV-------------GLSPNGIIYSTLIYNCCRMGCLKEAIRIY 496
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQ-DCSLLLRSIS 347
E M EG+ D T+ + K + +A + M DG +V DC I+
Sbjct: 497 EAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCL-----IN 551
Query: 348 SINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
N GL F V ++ +G+ + Y + + L K G EAEK +K++
Sbjct: 552 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 611
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D + Y+ ++ +CK+G A ++ EM + +PD T+T LI G C + A+L F
Sbjct: 612 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAIL-F 670
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYK--------LLVEMIEKVRLRPWQATFK 518
AK E +VL N + V+G +K E ++ + P T
Sbjct: 671 AKEAEARG-------NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTN 723
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+I+ ++E+ +LL M QN P
Sbjct: 724 AMIDGYSRMGKIEKTNDLLPEMGNQNGGP 752
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
SVYD + R + G ++ ++ + M GF P T + ++ + K+G + L E
Sbjct: 124 SVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKE 183
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M + PD+ T+ ILI CA +++ KM + Y + +++ + + R
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
A +LL M K + T+ LI L + R+ + LLR M+K+ P +
Sbjct: 244 FKAAIELLDHMKSK-GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYN 302
Query: 554 QYISKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
I+ F G V AS+ L + LS P+ + + + +EG EA + Y
Sbjct: 303 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFY 357
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 75/362 (20%), Positives = 144/362 (39%), Gaps = 27/362 (7%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARH---ESVRDFWNVVEEMKKEGYEMDIDTY 304
+AL F ++ E G + ++Y +L L ++ + R F+ MK+ G + TY
Sbjct: 351 EALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFY---MRMKRNGVCVGRITY 406
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN-- 362
+ K +++AV L M P + S L+ + F+ A
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGR------FKTAKEI 460
Query: 363 --KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ +G S + +Y + ++G EA ++ +AM G D+ T++ ++ LCK
Sbjct: 461 VCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCK 520
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
AG+ +A + M +G +P+ ++ LI G+ + E +A F +M + +
Sbjct: 521 AGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFT 580
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+ G + A K L + + V + TL+ + + L +A++L M
Sbjct: 581 YGSLLKGLCKGGHLREAEKFL-KSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFESFFNE 593
+++ P + IS G + L KE P+ Y + F
Sbjct: 640 VQRSILPDSYTYTSLIS--GLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 594 GR 595
G+
Sbjct: 698 GQ 699
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 117/286 (40%), Gaps = 8/286 (2%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
VG H + TY +L+ L + +R+ ++ + +D Y + K
Sbjct: 572 VGHHPTF----FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 627
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL-SKS 374
+ AV LF M+ P + L+ + + ++F A + E+ GN L +K
Sbjct: 628 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILF--AKEAEARGNVLPNKV 685
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G++ + M N G PD +T + +I G + G+ E ++L EM
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
P++ T+ IL+ G+ +V + L + ++ D L+ G +
Sbjct: 746 GNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML 805
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
K+L I + + + TF LI K + A +L+++M
Sbjct: 806 EIGLKILKAFICR-GVEVDRYTFNMLISKCCANGEINWAFDLVKVM 850
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/293 (19%), Positives = 125/293 (42%), Gaps = 3/293 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA +FR ++ G+ + +T N ++ +R + +++ EM + ++ TY +
Sbjct: 701 KAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNIL 760
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ K + + + L+ ++ P C L+ I N ++GL ++ +
Sbjct: 761 LHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGL--KILKAFICR 818
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + ++ + G + A ++K M + G D T ++ L + RF+++
Sbjct: 819 GVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQES 878
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
VL EM + G P+ + + LI G C ++ A + +M+ ++
Sbjct: 879 RMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ + A LL+ + K++L P A+F TL+ + EA+ L +M
Sbjct: 939 LAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVM 990
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 1/128 (0%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RAL K G+ DEA +++ M P +++ ++ CK G +A + M G
Sbjct: 937 RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLK 996
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV-NGAYK 499
D+ ++ +LI G CA ++ A + +M + A+A LI G L+++ +GA
Sbjct: 997 LDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADI 1056
Query: 500 LLVEMIEK 507
+L +++ +
Sbjct: 1057 ILKDLLAR 1064
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 5/204 (2%)
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G PD +T ++ G+C++ E +L G D T+ +LI CA E++ A
Sbjct: 784 GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWA 843
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
M D D D +++ R + +L EM K + P + LI
Sbjct: 844 FDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEM-SKQGISPESRKYIGLIN 902
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK-ALSVKEYP 578
L ++ A + M P V+ ++K G ++A+ L+ L +K P
Sbjct: 903 GLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVP 962
Query: 579 SSAAYLQVFESFFNEGRHYEAKDL 602
+ A++ + G EA +L
Sbjct: 963 TIASFTTLMHLCCKNGNVIEALEL 986
>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
Length = 795
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 165/391 (42%), Gaps = 40/391 (10%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
F +G+ G + +TYN ++ L + +++ +++ M +G D TY + R +
Sbjct: 223 FHEMMGQ--GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGY 280
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDL 354
+E+AV+L + M +P V SLL++ I P+
Sbjct: 281 CSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNS 340
Query: 355 GLVFRVANKYESLG------NSLSKSVYDGI---HRAL-------TKLGRFDEAEKMMKA 398
+ + + Y + G + L + DGI HRA K G D+A
Sbjct: 341 TIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTE 400
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M+ G PD ++YS VI LCK GR EDA ++M G P+I ++T LI G C+ E
Sbjct: 401 MRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGE 460
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ +M+ + DA ++ +++ + RV A +M+ + ++P ++
Sbjct: 461 WKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFF-DMVIHIGVKPDVVSYN 519
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
TLI+ +++E++ L M P + ++ + G VEDA + + K
Sbjct: 520 TLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRK 579
Query: 576 EYPSSAAYLQV-FESFFNEGRHYEAKDLLYK 605
+ A + F GR A++L K
Sbjct: 580 DVKFCAITSNIMLHGLFQAGRIVAARELYMK 610
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 137/298 (45%), Gaps = 14/298 (4%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSIS---SINNP--DLGLVFRVANKYESLGNSLS 372
EDA+ LF+ ++ SV + +L ++ S ++P L + N G ++
Sbjct: 31 EDALNLFDELLPQARPASVHAFNSVLTVVARADSSSSPRHSAALAVSLFNTMVRSGVNMM 90
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN-VL 431
++ + R +GR D A G+ N+T +Q+I GLC R +DA + V
Sbjct: 91 AAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAMDMVF 150
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM-EKNYDADADLL--DVLINGF 488
M E G PD+ ++ LI+G C + AL M + Y+ +++ + +I+GF
Sbjct: 151 RRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGF 210
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ V+ AY L EM+ + L P T+ +LI+ L A+ +++A+ +L+ M + P
Sbjct: 211 FKEGEVDKAYFLFHEMMGQ-GLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPD 269
Query: 549 PEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ ++ G +E+A LK +S P Y + + + GR EA+ +
Sbjct: 270 TRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSV 327
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 141/346 (40%), Gaps = 42/346 (12%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVV-EEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G++ +T N +++ L D ++V M + GY D+ +Y + + + +
Sbjct: 120 TGWRVQNVTLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQ 179
Query: 319 DAVKLFEFMM-DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A++L M DG Y +CS ++ S N +V D
Sbjct: 180 EALELLIHMTADGGY-----NCS---PNVVSYN-----------------------TVID 208
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
G K G D+A + M G PD +TY+ +I GLCKA + A +L M +
Sbjct: 209 GFF----KEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDK 264
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD +T+ I+I+G+C+ +++ A+ KM D +LI + R A
Sbjct: 265 GVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEA 324
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI- 556
+ M+ K + +P + L+ L + +LL LM + P F I
Sbjct: 325 RSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 383
Query: 557 --SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+K G V+ A + F + P +Y V GR +A
Sbjct: 384 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDA 429
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/371 (22%), Positives = 151/371 (40%), Gaps = 10/371 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ++YN ++ + V + + EM +G D+ TY + K + M+ AV +
Sbjct: 199 NVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAIL 258
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M D P + ++++R S+ L R+ K G Y + +
Sbjct: 259 QHMFDKGVMPDTRTYNIMIRGYCSLGQ--LEEAVRLLKKMSGSGLQPDVVTYSLLIQYYC 316
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+GR EA + +M G +P++ Y ++ G G D ++LD M +G + +
Sbjct: 317 KIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHR 376
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ILI + VD+A+ F +M + D +I+ RV A +M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGT 561
+ + L P +F +LI L ++ L M + P F + + K G
Sbjct: 437 VSE-GLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 495
Query: 562 VEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEA-KDLLYKCPHHIRQDSKI--S 617
V +A +F + + P +Y + + + G+ E+ K L +R DS S
Sbjct: 496 VVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNS 555
Query: 618 LLFGSAKSNKV 628
LL G K+ +V
Sbjct: 556 LLNGYFKNGRV 566
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 132/319 (41%), Gaps = 42/319 (13%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+N ++ A+H +V EM++ G D+ +Y + K +EDAV F M
Sbjct: 377 AFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQM 436
Query: 328 MDGPYKPSVQDCSLLLRSISSIN--NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
+ P++ + L+ + SI L F + N+ G + I L K
Sbjct: 437 VSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINR----GIHPDAIFMNTIMDNLCK 492
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
GR EA+ + + G +PD ++Y+ +I G C G+ +++ LD M G PD T
Sbjct: 493 EGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWT 552
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ L+ G+ V+ AL + +M K+ A +++++G R+ A +L ++M+
Sbjct: 553 YNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMV 612
Query: 506 EK---VRLRPWQA-------------------------------TFKTLIEKLLGARRLE 531
++ +R+ + TF +I LL R++
Sbjct: 613 DRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRID 672
Query: 532 EAMNLLRLMKKQNYPPFPE 550
EA +L M + P P+
Sbjct: 673 EAKSLFSAMVLRG--PVPD 689
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 143/346 (41%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N+ Y+ +L A ++ D ++++ M ++G + + + + K ++ A
Sbjct: 335 GQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKA 394
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M +P V S ++ + + + N+ S G S + + +
Sbjct: 395 MTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYH--FNQMVSEGLSPNIISFTSLI 452
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L +G + + E++ M N G PD I + ++ LCK GR +A + D + G
Sbjct: 453 HGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVK 512
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ ++ LI G+C ++D ++ +M+ D+ + L+NG+ RV A L
Sbjct: 513 PDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALAL 572
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EM K ++ T ++ L A R+ A L M + E + +
Sbjct: 573 YREMFRK-DVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLC 631
Query: 560 --GTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
V++A + L KE+ + V + GR EAK L
Sbjct: 632 ENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSL 677
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 106/457 (23%), Positives = 191/457 (41%), Gaps = 85/457 (18%)
Query: 111 KASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE----- 165
+A + F+ + K Q +P+ST+Y ++L K +L L M D E
Sbjct: 323 EARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNIL 381
Query: 166 ------------------------------TYLSILGVLKKAKKASDLAALNQFHDGMVK 195
+Y +++ +L K + D A+ F+ MV
Sbjct: 382 ICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVED--AVYHFNQ-MVS 438
Query: 196 EIAMDNVAKTLVDVVLG----SDWDDKIGKKLEDMKIELSDN-------FVLTVL----K 240
E N+ + ++ G +W KK+E++ E+ + F+ T++ K
Sbjct: 439 EGLSPNII-SFTSLIHGLCSIGEW-----KKVEELAFEMINRGIHPDAIFMNTIMDNLCK 492
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYN----GILRVLARHESVRDFWNVVEEMKKEG 296
E R+ V+A FF V H G K + ++YN G V ES++ ++ M G
Sbjct: 493 EGRV--VEAQDFFDMV-IHIGVKPDVVSYNTLIDGYCFVGKMDESIKQ----LDRMVSIG 545
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
D TY + + K +EDA+ L+ M ++ V+ C++ S+I L
Sbjct: 546 LRPDSWTYNSLLNGYFKNGRVEDALALYREM----FRKDVKFCAI----TSNIMLHGLFQ 597
Query: 357 VFRVANKYE------SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
R+ E G L Y+ + L + DEA +M + +++ FE D T
Sbjct: 598 AGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRT 657
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
+S VI L K GR ++A ++ M G +PD+ T++++I+ H ++ + F M
Sbjct: 658 FSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSME 717
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ AD+ +L++++ L + V A L ++ EK
Sbjct: 718 KNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEK 754
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 114/244 (46%), Gaps = 5/244 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEM-KKEGYEMDIDTYIKISRQFQKFRMMED 319
G + ++ TYN +L ++ V D + EM +K+ I + I + FQ R++
Sbjct: 545 GLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVA- 603
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A +L+ M+D + ++ + +L + + D L R+ S L + +
Sbjct: 604 ARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL--RMFEDLRSKEFELDVRTFSIV 661
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL K+GR DEA+ + AM G PD ITYS +I + G E++ N+ ME+NGC
Sbjct: 662 INALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGC 721
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D I+++ +V RA K+ EKN+ +A +LI +S+K+ K
Sbjct: 722 AADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNFSLEASTAALLIP-IVSEKKYQKEVK 780
Query: 500 LLVE 503
L E
Sbjct: 781 FLPE 784
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 166/355 (46%), Gaps = 12/355 (3%)
Query: 194 VKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFF 253
V+++A +VAK + V++ S I L+ + +S V VL R + A FF
Sbjct: 30 VRDVA--DVAKNISKVLMSSP-QLVIDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFF 86
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+W + Y+H+ Y+ ++ A+ + W+++ M K+ ++++T+ + R++ +
Sbjct: 87 QWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMMKKKM-LNVETFCIVMRKYAR 145
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS- 372
+ +++A+ F M P++ + LL ++ N V + +E++ + +
Sbjct: 146 AQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKN-----VRKAQEIFENMRDRFTP 200
Query: 373 -KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + K +A ++ + M +AG PD +TYS ++ LCKAGR ++A ++
Sbjct: 201 DSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIV 260
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
M+ + C P +++L+ + ++ A+ F +M AD + + LI F
Sbjct: 261 RSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKT 320
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
R+ Y++L EM K + P + ++ L+ +EA ++ R M K P
Sbjct: 321 NRMKNVYRVLKEMKSK-GVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMIKVCEP 374
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/351 (24%), Positives = 138/351 (39%), Gaps = 54/351 (15%)
Query: 232 DNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
+ F + + K R V + V E N + +NG+L L + ++VR + E
Sbjct: 134 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFEN 193
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M+ + + D TY + + K + A ++F M+D P + S+++ +
Sbjct: 194 MR-DRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCKAGR 252
Query: 352 PD--LGLVFRVANKYESLGNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
D LG+V S+ S+ K +Y + R +EA M+ +G +
Sbjct: 253 VDEALGIV-------RSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKA 305
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENG---------------------------- 438
D ++ +I CK R ++ VL EM+ G
Sbjct: 306 DVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVF 365
Query: 439 ------CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
C PD T+T++I+ C E++ A + M +K VLING +
Sbjct: 366 RKMIKVCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEP 425
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR------LEEAMNLL 537
A LL EMIE + +RP ATF L + LL R L E MN+L
Sbjct: 426 NTQKACVLLEEMIE-MGIRPSGATFGRLRQLLLKEDREDVLKFLNEKMNVL 475
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 168/397 (42%), Gaps = 16/397 (4%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+++ L++ +++ E V VL + N A FF W ++ + S Y +M+ +
Sbjct: 52 IDSALDQSGLRVSPEVVEDVLYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAK 111
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDN 201
K W + M + + ET+ ++ +A+K + A+ F+ ++ +
Sbjct: 112 IRQYKLMWDLINAMMKKK-MLNVETFCIVMRKYARAQKVDE--AIYAFNVMEKYDLPPNL 168
Query: 202 VA-KTLVDVVLGSDWDDKIGKKLEDMKIELS-DNFVLTVL-----KELRIYPVKALGFFR 254
VA L+ + S K + E+M+ + D+ ++L KE + KA FR
Sbjct: 169 VAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNL--PKAREVFR 226
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ + +G + +TY+ ++ +L + V + +V M + Y + +
Sbjct: 227 EMVD-AGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTE 285
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+E+AV F M K V + L+ + N + V+RV + +S G + +
Sbjct: 286 TRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNR--MKNVYRVLKEMKSKGVTPNSK 343
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ I R L G DEA + + M EPD TY+ +I C+ E A V M
Sbjct: 344 SCNIILRHLIDRGEKDEAFDVFRKMIKVC-EPDADTYTMMIKMFCEKKEMETADKVWKYM 402
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ G P + T+++LI G C +A + +M+E
Sbjct: 403 RKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIE 439
Score = 45.4 bits (106), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 79/183 (43%), Gaps = 2/183 (1%)
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
T+ V+ +A + ++A + ME+ P++ + L+ C + V +A F M
Sbjct: 135 TFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEIFENM 194
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
++ + D+ +L+ G+ + + A ++ EM++ L P T+ +++ L A R
Sbjct: 195 RDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSL-PDIVTYSIMVDILCKAGR 252
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFES 589
++EA+ ++R M P + + +GT E + E A + VF S
Sbjct: 253 VDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNS 312
Query: 590 FFN 592
Sbjct: 313 LIG 315
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 185/410 (45%), Gaps = 17/410 (4%)
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH--- 259
AK L +++ + +L+ + ++ + VL+ L + A FF W +
Sbjct: 36 AKRLCKLIISCRQASGLEIELDHSDLRVTPDVAERVLERLDNAGMLAYRFFEWARKQRRG 95
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G H +++ ++ LA+ + W+VV M+++G ++++T+ I R++ + + +++
Sbjct: 96 GGCAHTVRSFHTVVASLAKIRQYQLMWDVVAIMRRQGV-VNVETFGIIMRKYARAQKVDE 154
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS--KSVYD 377
AV F M P++ + LL ++ N V + +E + S Y
Sbjct: 155 AVYTFNVMEKYGVVPNLAAFNSLLCALCKSKN-----VRKAQEIFEQMNGRFSPDAKTYS 209
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + K+ M +AG +PD +TY ++ LCK GR E+A V+ +M
Sbjct: 210 ILLEGWGRAPNLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSR 269
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P +++L+ + ++ A+ F M + D + + L+ F K+ + A
Sbjct: 270 GCQPTTFIYSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNA 329
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++++ +M E + P T+ ++ KL+ + +EA + R M K+ P + + I
Sbjct: 330 FRVMDDM-EGHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPD-SDTYTMMIK 387
Query: 558 KF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
F +E A + K + +K++ PS + + ++G +A LL
Sbjct: 388 MFCENDRLEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 437
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 125/308 (40%), Gaps = 38/308 (12%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V E G N +N +L L + ++VR + E+M + D TY + + +
Sbjct: 161 VMEKYGVVPNLAAFNSLLCALCKSKNVRKAQEIFEQMNGR-FSPDAKTYSILLEGWGRAP 219
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ K++ M+D +P + +++ S+ + + V S G + +
Sbjct: 220 NLPKMRKVYSDMLDAGCQPDIVTYGIMVDSLCKTGRVEEAVF--VVQDMTSRGCQPTTFI 277
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + R ++A M+ G PD + Y+ ++ CK +F++A V+D+ME
Sbjct: 278 YSVLVHTYGVEMRIEDAVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDME 337
Query: 436 ENG----------------------------------CIPDIKTWTILIQGHCAANEVDR 461
+G C PD T+T++I+ C + ++
Sbjct: 338 GHGITPNSRTWNIILNKLISLGKDDEAYRVFRRMIKRCQPDSDTYTMMIKMFCENDRLEM 397
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AL + M K + VLING + V+ A LL +MIEK +RP +TF L
Sbjct: 398 ALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEK-GIRPPGSTFGKLR 456
Query: 522 EKLLGARR 529
+ LL R
Sbjct: 457 QLLLKEGR 464
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 120/499 (24%), Positives = 213/499 (42%), Gaps = 27/499 (5%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK------ 142
+ P L + V V+ K DP KA FN + + F+ + + Y R+++ K
Sbjct: 1 MGPPLLPKHVTAVI-KCQKDPMKALEMFNSMRKEVGFKHTLSTY----RSVIEKLGYYGK 55
Query: 143 -DSLKQFWVTLRRMKEDHCYIEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIA 198
+++++ V +R +H + E Y+ + G K ++A ++ F+D +
Sbjct: 56 FEAMEEVLVDMRENVGNH--MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS 113
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ + LVD D K+ ++ D I D + T+ + + R +
Sbjct: 114 YNAIMSVLVDSGY-FDQAHKVYMRMRDRGIT-PDVYSFTIRMKSFCKTSRPHAALRLLNN 171
Query: 259 HS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRM 316
S G + N + Y ++ + + + +M G + + T+ K+ R K
Sbjct: 172 MSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGD 231
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+++ KL + ++ P++ +L ++ + D G V V E G Y
Sbjct: 232 VKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELD-GAVRMVGCLIEQ-GPKPDVITY 289
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K +F EAE + M N G EPD+ TY+ +I G CK G + A ++ +
Sbjct: 290 NNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVF 349
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NG +PD T+ LI G C E +RAL F + + K + L + LI G +Q +
Sbjct: 350 NGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILE 409
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L EM EK L P TF L+ L + +A L+++M + Y P F I
Sbjct: 410 AAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468
Query: 557 SKFGT---VEDASEFLKAL 572
+ T +E+A E L +
Sbjct: 469 HGYSTQLKMENALEILDVM 487
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 144/349 (41%), Gaps = 41/349 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N I YN +++ L+ + + + EM ++G ++ T+ + K + DA
Sbjct: 386 GIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ Y P + ++L IH
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL------------------------------------IH 469
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
T+L + + A +++ M + G +PD TY+ ++ GLCK +FED M E GC
Sbjct: 470 GYSTQL-KMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCA 528
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ IL++ C ++D AL +M K+ + DA LI+GF ++GAY L
Sbjct: 529 PNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+M E ++ T+ +I + A L + M + P + V
Sbjct: 589 FRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G V +FL + + PS +V E R YEA ++++
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 144/377 (38%), Gaps = 42/377 (11%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+ + +A A FN K +P+ +Y+ +++ L N+ + + M E E +
Sbjct: 369 EGETNRALALFNEALGKG-IKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQ 427
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK---TLVDVVLGSDWDDKIGKK 222
T+ ++ L K SD DG+VK + T ++ G K+
Sbjct: 428 TFNILVNGLCKMGCVSD-------ADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
LE + + L DN G + TYN +L L +
Sbjct: 481 LEILDVML-DN---------------------------GVDPDVYTYNSLLNGLCKTSKF 512
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
D + M ++G ++ T+ + ++R +++A+ L E M + P L
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 343 LRSISSINNPDLGLVFRVANKYE-SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
+ N DL + + K E + S S Y+ I A T+ AEK+ + M +
Sbjct: 573 IDGFCK--NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
PD TY ++ G CK G L EM ENG IP + T +I C + V
Sbjct: 631 RCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYE 690
Query: 462 ALLCFAKMMEKNYDADA 478
A +M++K +A
Sbjct: 691 AAGIIHRMVQKGLVPEA 707
>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
distachyon]
Length = 807
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 170/417 (40%), Gaps = 77/417 (18%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +N ++ A+ VR+ + E+M+K G D+ TY+ + F + M+DA
Sbjct: 381 GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDA 440
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL----GLVFRVANK--------YESLG 368
+ F M+D +P+ L++ + + DL LV+ + NK + SL
Sbjct: 441 MDKFNHMIDKGVEPNFAVYQCLIQGFCT--HGDLVKAEELVYEIRNKGLGPCILSFASLI 498
Query: 369 NSLSKS--------VYDGIHRALTK---------------LGRFDEAEKMMKAMKNAGFE 405
N L K ++D I R K +G+ EA ++ AM + G E
Sbjct: 499 NHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIE 558
Query: 406 PDNITYSQVIFGLCKAGRFED-----------------------------------ACNV 430
PD +TY ++ G CK GR +D A +
Sbjct: 559 PDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEM 618
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
EM E+G I T++IL+ G C N + A+ F K+ N D +L+++I+
Sbjct: 619 FQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFK 678
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP--- 547
+R A L I L P T+ ++E L+ +EEA + +M K P
Sbjct: 679 ARRREEAEGLFAS-IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSH 737
Query: 548 FPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFN-EGRHYEAKDLL 603
F V+ + + G + A ++ + K A+ + S F+ +G+H E +LL
Sbjct: 738 FINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 136/344 (39%), Gaps = 13/344 (3%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G N +TYN ++ L + +V ++ +M G + D TY + + +
Sbjct: 239 QQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWK 298
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSV 375
AV++F+ M P+ CS + + G + ++S+ G+ L+
Sbjct: 299 QAVRMFKEMTSRGVIPNTVTCSTFVAFLCK-----HGRIEEAREFFDSMLAKGHKLNIIS 353
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + G + + M G P+ ++ ++ G K G +A + ++M+
Sbjct: 354 YSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQ 413
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD+ T+ +I C +D A+ F M++K + + + LI GF + +
Sbjct: 414 KRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLV 473
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L+ E+ K L P +F +LI L R+ EA + ++ + F
Sbjct: 474 KAEELVYEIRNK-GLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSL 532
Query: 556 ISKFGTVEDASEFLKA----LSVKEYPSSAAYLQVFESFFNEGR 595
I + + SE + +SV P Y + GR
Sbjct: 533 IDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGR 576
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 106/234 (45%), Gaps = 5/234 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + AL K D+A+ +++ M G +PDN+TY+ +I G G+++ A + EM
Sbjct: 249 YNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMT 308
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G IP+ T + + C ++ A F M+ K + + L++G+ + +
Sbjct: 309 SRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLV 368
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
L M+ + P Q F L+ + EAM + M+K+ P ++
Sbjct: 369 DMSNLFNLMVRD-GIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAV 427
Query: 556 ISKF---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I F G+++DA +F + P+ A Y + + F G +A++L+Y+
Sbjct: 428 IHAFCRMGSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYE 481
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 143/365 (39%), Gaps = 11/365 (3%)
Query: 246 PVKALGFFRWVGEHSGYK---HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
P A+ F + +G + TY+ ++ R + + + ++G + D+
Sbjct: 80 PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139
Query: 303 TYIKISRQFQKFRMMEDAVK-LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRV 360
+ R + ++AV LF M + P S +L+S+ L + R+
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A K + G + VY + L K G+ EA + M G P+ +TY+ VI LCK
Sbjct: 200 AVK-QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCK 258
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
A + A +L +M NG PD T+ LI G+ + +A+ F +M + +
Sbjct: 259 ARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVT 318
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ R+ A + M+ K + ++ TL+ A L + NL LM
Sbjct: 319 CSTFVAFLCKHGRIEEAREFFDSMLAKGH-KLNIISYSTLLHGYATAGCLVDMSNLFNLM 377
Query: 541 KKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
+ P F V +K G V +A + + + P YL V +F G
Sbjct: 378 VRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSM 437
Query: 597 YEAKD 601
+A D
Sbjct: 438 DDAMD 442
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 107/249 (42%), Gaps = 11/249 (4%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL-DEMEENGCIPDIKTW 446
R D A + G + D I S ++ GLC A R ++A +VL M E GC+PD ++
Sbjct: 118 RLDLAFAFFGCLLRQGMKADVIVVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISY 177
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLL--DVLINGFLSQKRVNGAYKLLVEM 504
+ +++ C AL +++ +++ +++G + +V A L EM
Sbjct: 178 STVLKSVCDDGRSQWALDILRMAVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEM 237
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV-- 562
++ + P T+ ++I L AR +++A +LR M P + I + T+
Sbjct: 238 TQQ-GVPPNVVTYNSVIHALCKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQ 296
Query: 563 -EDASEFLKALSVKEYPSSAAYLQVFESFF-NEGRHYEAK---DLLYKCPHHIRQDSKIS 617
+ A K ++ + + F +F GR EA+ D + H + S +
Sbjct: 297 WKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYST 356
Query: 618 LLFGSAKSN 626
LL G A +
Sbjct: 357 LLHGYATAG 365
>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
Length = 591
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 155/352 (44%), Gaps = 8/352 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY-EMDIDTYIKISRQFQKFRMMED 319
G +N +T+ ++R L V+D ++ +++ +E E + Y + K +
Sbjct: 137 GIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQK 196
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A L M G KP+ + ++++ + D K +S+ + Y +
Sbjct: 197 AFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIF--TYSTL 254
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL KL +++ + M + P+ T++ VI GLCK G+ EDA ++ M E G
Sbjct: 255 IDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV 314
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ ++I G+ +VDRA F M+ K+ + D ++LING+ QK+++ A +
Sbjct: 315 DPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQ 374
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
+ E+ +K L+P T L+ L R + A N M + P + +
Sbjct: 375 VCREISQK-GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433
Query: 560 ---GTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCP 607
G VE+A S F K +E + Y V + G+ +A K P
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLP 485
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/422 (20%), Positives = 180/422 (42%), Gaps = 46/422 (10%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
+N + A F + + P+ +Y ++ L K ++ + LR M++
Sbjct: 155 ENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTR 214
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLG-SDWDDKIGKKL 223
TY ++ K +L ++ K I D TL+D + S W++ L
Sbjct: 215 TYTIVIDAFCKDGMLDGATSL--LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFL 272
Query: 224 EDMKIELSDNF------VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLA 277
E + + + N + + KE ++ + + R++ E G + ITYN I+
Sbjct: 273 EMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEI--MRYMIE-KGVDPDVITYNMIIDGYG 329
Query: 278 RHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQ 337
V + + M + E DI +Y + + + + +++A+++ + KPS+
Sbjct: 330 LRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIV 389
Query: 338 DCSLLLRSI-----------------SSINNPDL-------------GLVFRVANKYESL 367
C++LL + S+ + PDL GLV + + L
Sbjct: 390 TCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKL 449
Query: 368 GNSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
+ +Y + L K G+ D+A + + G PD ITY+ +I G C+ G
Sbjct: 450 ERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLL 509
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A ++L +ME+NGC+ D +T+ ++++G +N+V ++ K++ +A +++L
Sbjct: 510 DEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELL 569
Query: 485 IN 486
++
Sbjct: 570 MD 571
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 117/290 (40%), Gaps = 39/290 (13%)
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL----------------RSISSIN 350
+S +FQ + ++DA LF M+ PSV S LL R I +
Sbjct: 43 VSNEFQNVKCLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLR 102
Query: 351 NP-------------------DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
P DLG F V + G ++ + + R L + +
Sbjct: 103 IPVHEFILSIVVNSCCLMHRTDLG--FSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160
Query: 392 AEKMMKAMKNAGF-EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
A + K + EP+ + Y V+ GLCK G + A ++L ME+ P+ +T+TI+I
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
C +D A +M +K+ D LI+ + L +EMI + +
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIH-LNI 279
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
P TF ++I+ L ++E+A ++R M ++ P + I +G
Sbjct: 280 YPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYG 329
>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 657
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 183/409 (44%), Gaps = 37/409 (9%)
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
E+ ++ VL L++ P+ AL FF+ + + +KH +T+ ++R LA V +
Sbjct: 39 EIKESAVLKRLRQESCVPL-ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYL 97
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+++MK +G+ D +I + +++ + E AV++F + + PSV+ + +L ++
Sbjct: 98 LQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLG 157
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
N + +++ V + G + Y+ + +AL K + D A+K++ M N G P+
Sbjct: 158 ENR--IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNA 215
Query: 409 ITYSQVI------------------------------FGLCKAGRFEDACNVLDEMEENG 438
++Y+ VI GLCK ++ ++ EM E G
Sbjct: 216 VSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKG 275
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P++ +++ LI + +++ A A+M+++ + L L+ G + A
Sbjct: 276 ISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDAL 335
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+ +MI L+P + TL++ +++A+++ M++ P + I+
Sbjct: 336 DMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLING 395
Query: 559 F---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F G++E A K L+ P+ Y + E+ + EA+ L+
Sbjct: 396 FTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLI 444
Score = 95.5 bits (236), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 189/451 (41%), Gaps = 33/451 (7%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
A FF + + F+ + + +M+R L + L++MK + E+ ++S++
Sbjct: 58 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 117
Query: 172 GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT---LVDVVLGSDWDDKIGKKLEDMKI 228
V ++ A A+ F+ +KE D K ++D +LG + I DMK
Sbjct: 118 SVYRQVGLAER--AVEMFYR--IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 173
Query: 229 ELSDNFVLT--VLKELRIYPVKALGFFRWVGEHS--GYKHNTITYNGILRVLARHESVRD 284
+ + V T VL + K G + + E S G N ++Y ++ + V++
Sbjct: 174 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKE 233
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
+ E +E + Y + K R + V+L M++ P+V S L+
Sbjct: 234 GRQLAER-----FEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLIN 288
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR-------ALTKLGRFDEAEKMMK 397
+S N+ + L F + L L + + IH + FD + +
Sbjct: 289 ELS--NSGQIELAFSL------LAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQ 340
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
++ G +P+ + Y+ ++ G C G + A +V MEE GC P+I+T+ LI G
Sbjct: 341 MIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRG 400
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++ A+ + KM+ + + ++ + A + L+E++ K P TF
Sbjct: 401 SLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEA-ESLIEIMSKENCAPSVPTF 459
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQ-NYPP 547
I+ L A RL+ A + R M++Q PP
Sbjct: 460 NAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 100/489 (20%), Positives = 197/489 (40%), Gaps = 56/489 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLK 175
+ F P+ Y+++L+ L + + L M C +Y +++ G++K
Sbjct: 173 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVK 232
Query: 176 KAKKASD-----LAALNQFHDGMVKE--------IAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ ++ ++ ++ N +G+ KE + + V K + V+ + I +
Sbjct: 233 EGRQLAERFEPVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVI--SYSTLINEL 290
Query: 223 LEDMKIELSDNFVLTVLKE-----------------LRIYPVKALGFFRWVGEHSGYKHN 265
+IEL+ + + +LK +R AL + + G + N
Sbjct: 291 SNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPN 350
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+ YN +++ H ++ +V M++ G +I TY + F K +E AV ++
Sbjct: 351 VVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWN 410
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-------VYDG 378
M+ P+V + ++ ++ + F+ A ESL +SK ++
Sbjct: 411 KMLTSGCCPNVVVYTSMVEALCRHSK------FKEA---ESLIEIMSKENCAPSVPTFNA 461
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNI-TYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L GR D AEK+ + M+ P NI TY++++ GL KA R E+A + E+
Sbjct: 462 FIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 521
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G T+ L+ G C A AL KMM D ++++I + Q + A
Sbjct: 522 GVEWSTSTYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERA 581
Query: 498 YKLL-VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
++L + + + RP ++ +I L + E+ + L M + P Q
Sbjct: 582 VQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIPILRSVCQEA 641
Query: 557 SKFGTVEDA 565
++ D
Sbjct: 642 ARMTIPNDV 650
>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 10/304 (3%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V A G F+ +GE +G + + +TY+ I+ L + V + ++ MK +G +I TY
Sbjct: 27 VAAAGLFKKMGE-AGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNS 85
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR---VANK 363
+ + F +A + MM P++ SLL+ N VF V
Sbjct: 86 LIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGN-----VFEARGVLKT 140
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+G + Y + + EA K+ M G +PD +Y+ +I G CKA R
Sbjct: 141 MTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKR 200
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A + +EM G PDI ++ LI G C + A F M+ D +
Sbjct: 201 IGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSI 260
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
L++GF Q + A++L M + L+P + LI+ + +R L+EA L + Q
Sbjct: 261 LLDGFCKQGYLAKAFRLFRAM-QSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQ 319
Query: 544 NYPP 547
P
Sbjct: 320 GLQP 323
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 4/256 (1%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M GY+ D+ TY I K A LF+ M + +P V S ++ S+
Sbjct: 1 MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+ L + + ++ G S + Y+ + + L R+ EA M+ M + P+ +T+
Sbjct: 61 VNEAL--DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTF 118
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
S +I CK G +A VL M E G P++ T++ L+ G+ EV A F M+
Sbjct: 119 SLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMIT 178
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K D ++LING+ KR+ A +L EMI + L P ++ TLI+ L RL
Sbjct: 179 KGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ-GLTPDIVSYNTLIDGLCQLGRLR 237
Query: 532 EAMNLLR-LMKKQNYP 546
EA +L + ++ N P
Sbjct: 238 EAHDLFKNMLTNGNLP 253
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 206/496 (41%), Gaps = 27/496 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P S YSL++ ++ + + L MK+ TY I+ L +
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL- 441
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
Q + +++E+ M+ + V K G+ +E+ ++ L +L +
Sbjct: 442 ------QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR-VEESRMILERMREQGILPD 494
Query: 242 LRIYPVKALGFFRW--VGEHSGY---------KHNTITYNGILRVLARHESVRDFWNVVE 290
+ Y +GF + + E Y + N TY + ++ +
Sbjct: 495 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 554
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM G ++ Y + K + +A +F F++ VQ S+L+ +S
Sbjct: 555 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS--R 612
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
N + F + ++ + G + Y+ + K G D+A ++++ M G PD +T
Sbjct: 613 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 672
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I GLCKAG E A N+ D++E G P+ T+ ++ G+C + A +M+
Sbjct: 673 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 732
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ DA + +V++N +++ A L EM+EK +F TLIE + +L
Sbjct: 733 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGKL 790
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASE-FLKALSVKEYPSSAAYLQV 586
+EA +LL M ++ + P + I K G + +A +L+ P++ Y +
Sbjct: 791 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 850
Query: 587 FESFFNEGRHYEAKDL 602
+ N G E L
Sbjct: 851 LHGYHNIGNMSEVSAL 866
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 130/283 (45%), Gaps = 9/283 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ + +V+D V+ EM ++G ++ TY I + R++++A++L M
Sbjct: 217 TYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSM 276
Query: 328 MDGPYKPSVQDCSLLLRSIS---SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+D P + +L+ L L+ + +G Y+ +
Sbjct: 277 VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI-----DVGLKPEPITYNALIDGFM 331
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G ++A ++ M G E + I ++ ++ G+CKAG+ E A ++ EM E G PD +
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+++LI+GHC + RA +M ++ V+ING + G +L EM
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ L+P + TL+ R+EE+ +L M++Q P
Sbjct: 452 VMN-GLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 493
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 116/532 (21%), Positives = 208/532 (39%), Gaps = 67/532 (12%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDL 183
+FRPS + +L +L+ + ++ FW M + TY +++ K D
Sbjct: 175 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 234
Query: 184 AALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFV-LTVLK 240
+ + E+ + LV +V++G +L D IEL + V ++
Sbjct: 235 KRV-------LLEMGEKGCSPNLVTYNVIIGGLCR----ARLLDEAIELKRSMVDKGLVP 283
Query: 241 ELRIYPVKALGFFRWVGEHS-----------GYKHNTITYNGILRVLARHESVRDFWNVV 289
+L Y + GF G K ITYN ++ R + + +
Sbjct: 284 DLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIK 343
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G E ++ + + K ME A+++ + MM+ +P Q SLL+
Sbjct: 344 DEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIE--GHC 401
Query: 350 NNPDLGLVFRVANK------------YESLGNSLSKS----------------------- 374
++ F + ++ Y + N L +
Sbjct: 402 RGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAV 461
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
VY + A K GR +E+ +++ M+ G PD Y+ +I G CKA R E+A L EM
Sbjct: 462 VYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEM 521
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E P+ T+ I G+ A E++ A F +M+ + + LI G + V
Sbjct: 522 LERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNV 581
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A+ + ++ + L+ Q T+ LI L ++ EA + ++++ P +
Sbjct: 582 TEAFSVFRFILSRRVLQDVQ-TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNS 640
Query: 555 YIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
IS K G V+ AS+ L+ + +K P Y + + G AK+L
Sbjct: 641 LISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNL 692
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 8/207 (3%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD TY+ +I CK G +DA VL EM E GC P++ T+ ++I G C A +D A+
Sbjct: 213 PDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIEL 272
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
M++K D D+LINGF +KR A +L+EMI+ V L+P T+ LI+ +
Sbjct: 273 KRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID-VGLKPEPITYNALIDGFM 331
Query: 526 GARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSA 581
+E+A + M + + K G +E A E ++ + K P S
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391
Query: 582 AYLQVFESFF---NEGRHYEAKDLLYK 605
Y + E N R +E D + K
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKK 418
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/347 (22%), Positives = 150/347 (43%), Gaps = 51/347 (14%)
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
++M +D+Y +K + +AV +F + ++PS+ C+ LL + N +L
Sbjct: 148 FDMLMDSY-------RKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFW 200
Query: 357 -VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
VF ++ L + + Y + A K+G +A++++ M G P+ +TY+ +I
Sbjct: 201 KVFDGMCAHKVLPDVYT---YTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVII 257
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLC+A ++A + M + G +PD+ T+ ILI G C A L +M++
Sbjct: 258 GGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLK 317
Query: 476 ADADLLDVLINGFLSQKRVNGAYK-----------------------------------L 500
+ + LI+GF+ Q + A++ +
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 377
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+ EM+EK + P T+ LIE + + A LL MKK+ P + + +
Sbjct: 378 MQEMMEK-GVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 436
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G ++ + L+ + + P++ Y + + EGR E++ +L
Sbjct: 437 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 170/426 (39%), Gaps = 61/426 (14%)
Query: 234 FVLT--VLKELRIYPV------------KALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
F+L+ VL++++ Y V +A G F + E G N TYN ++ +
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE-KGLLPNAFTYNSLISGSCKQ 648
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE-------------- 325
+V ++EEM +G DI TY + K +E A LF+
Sbjct: 649 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 708
Query: 326 -FMMDGPYKPSVQDCS------LLLRSISSINNPD---LGLVFRVANKYESLGNSL---- 371
M+DG K + +LLR + PD ++ K E +L
Sbjct: 709 AAMVDGYCKSKNPTAAFQLLEEMLLRGVP----PDAFIYNVILNFCCKEEKFEKALDLFQ 764
Query: 372 --------SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
S ++ + K G+ EA +++ M F P+++TY+ +I CKAG
Sbjct: 765 EMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 824
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A + EM+E +P KT+T L+ G+ + F +M+ K + D V
Sbjct: 825 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 884
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+I+ + + V A KL E++ V+ P A + LI+ L E + LL + +
Sbjct: 885 MIDAYCREGNVMEACKLKDEIL--VKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGE 942
Query: 543 QNYP---PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ P + G +++A+E L+++ + S+ L G + E
Sbjct: 943 SGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSED 1002
Query: 600 KDLLYK 605
D L K
Sbjct: 1003 SDNLLK 1008
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 123/268 (45%), Gaps = 23/268 (8%)
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKS-----------VYDGIHRALTKLGRFDE 391
LR + S PD G + K + G + Y+ + G+ D
Sbjct: 85 LRLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAACGPDVMAYNAMVAGYCGAGQLDA 144
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A +++ M EPD TY+ +I GLC GR +A VLDEM C+PD+ T+TIL++
Sbjct: 145 ARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLE 201
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
C + +A+ +M +K D +V++NG + RV+ A + L + +
Sbjct: 202 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFL-KNLPSYGCE 260
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEF 568
P ++ +++ L A R E+A L+ M ++ PP F + ++ + G VE A E
Sbjct: 261 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 320
Query: 569 LKALSVKEY---PSSAAYLQVFESFFNE 593
L+ + +Y P+S +Y + +F +
Sbjct: 321 LE--QIPKYGCTPNSLSYNPLLHAFCKQ 346
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/413 (23%), Positives = 176/413 (42%), Gaps = 39/413 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P + Y+ ++R L + L M C + TY +L K++ +
Sbjct: 156 PDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKL 215
Query: 186 LNQFHD-GMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L++ D G +I NV VV G + ++ +E LK L
Sbjct: 216 LDEMRDKGCTPDIVTYNV------VVNGICQEGRVDDAIE-------------FLKNLPS 256
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
Y G + NT++YN +L+ L E D ++ EM ++G ++ T+
Sbjct: 257 Y---------------GCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 301
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + ++E A+++ E + P+ + LL + D + F +
Sbjct: 302 NMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAF--LDLM 359
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
S G Y+ + AL + G D A +++ +K+ G P I+Y+ VI GL KAG+
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++A +L+EM G PDI T++ + G C + ++ A+ F K+ + + L + +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
I G ++ + A L MI + P ++T+ LIE L ++EA +LL
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCM-PNESTYTILIEGLAYEGLIKEARDLL 531
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 155/378 (41%), Gaps = 48/378 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++R L + V++EM + D+ TY + K + A+KL + M
Sbjct: 160 TYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 219
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
D P + ++++ I D + F S G + Y+ + + L
Sbjct: 220 RDKGCTPDIVTYNVVVNGICQEGRVDDAIEF--LKNLPSYGCEPNTVSYNIVLKGLCTAE 277
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R+++AE++M M G P+ +T++ +I LC+ G E A VL+++ + GC P+ ++
Sbjct: 278 RWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYN 337
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
L+ C ++D+A+ M+ + D + L+ V+ A +LL ++ +K
Sbjct: 338 PLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDK 397
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY------------ 555
P ++ T+I+ L A + +EA+ LL M + P + Y
Sbjct: 398 -GCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQP---DIITYSTIAAGLCREDR 453
Query: 556 ----ISKFGTVEDAS-------------------EFLKALSVKEY-------PSSAAYLQ 585
I FG V+D E A+ + Y P+ + Y
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513
Query: 586 VFESFFNEGRHYEAKDLL 603
+ E EG EA+DLL
Sbjct: 514 LIEGLAYEGLIKEARDLL 531
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 156/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 54 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ +T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + + L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQVHHLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ L+V P + Y + F +G ++ LL
Sbjct: 351 DEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G + ++ M G +PD ITY+ +I G CK G + A +M +
Sbjct: 290 YGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ DA ++IN F + V KL
Sbjct: 350 LDEVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 77/188 (40%), Gaps = 37/188 (19%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITYN ++ L + ++ ++++EM +G + D TY
Sbjct: 281 DLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITYTT------------------ 322
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
++DG K DL F + L + Y + L
Sbjct: 323 --LIDGCCKEG-----------------DLDTAFEHRKQMIQENIRLDEVAYTALISGLC 363
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ GR +AEKM++ M N G +PD TY+ +I CK G +L EM+ +G +P +
Sbjct: 364 QEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVV 423
Query: 445 TWTILIQG 452
T+ +L+ G
Sbjct: 424 TYNVLMNG 431
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/360 (26%), Positives = 163/360 (45%), Gaps = 20/360 (5%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+K + F + E SG++ N Y+ +L LA+ + + M+ +G+ + + Y
Sbjct: 141 LKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRT 200
Query: 307 ISRQFQKFRMMEDA----VKLFE--FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
I K E A K+ + F++D S LLL +N D VF +
Sbjct: 201 IVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTS-----LLLGFCRGLNLRDALKVFDL 255
Query: 361 ANKYESLG-NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
++ + NS+S S+ IH L ++GR +EA + M G +P TY+ +I LC
Sbjct: 256 MSREGTCAPNSVSYSIL--IH-GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
G + A N+ DEM GC P++ T+T+LI G C +++ A KM++
Sbjct: 313 DRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVI 372
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ LING+ RV A++LL M EK +P TF L+E L + +A++LL+
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 540 MKKQNYPPFPEPF---VQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGR 595
M P + + + + G + A + L ++ S P + + +F +G+
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGK 491
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 130/619 (21%), Positives = 248/619 (40%), Gaps = 91/619 (14%)
Query: 7 VLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSP 66
+L +R+ +L++R R +F FF +SS SQF + +
Sbjct: 1 MLIHIRIPRKILALR----RHVFPPYNAFFSVSS-------RPSQFSSD-------QVAA 42
Query: 67 NSSLELILACDW--SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ 124
++ L+ + +W + L++ + +SP + + V L++ DND FF WVC
Sbjct: 43 HNVASLLKSPNWEKNSSLKSLVSHMSPNVASQ--VISLQRSDNDI--CVRFFMWVCKHSS 98
Query: 125 FRPSSTVYSLMLRNLVNKDSLK---QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+ T + +L+ +V+ + V L R C E+ L ++ + ++ S
Sbjct: 99 YCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIR----ECSRCEKEMLKLISCFDELREVS 154
Query: 182 D-----------LAALNQFHDGMVKEIAMDNVAKTLVDVVLGS-DWDDKIGKKLEDMKIE 229
L +L + G + + + V+G D+ + ++ E
Sbjct: 155 GFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEAD--GFVVGMIDYRTIVNALCKNGYTE 212
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
++ F+ +LK G+ ++ +L R ++RD V
Sbjct: 213 AAEMFMCKILK-------------------VGFLLDSHIVTSLLLGFCRGLNLRDALKVF 253
Query: 290 EEMKKEG--------YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+ M +EG Y + I ++ R +E+A L + M + +PS + ++
Sbjct: 254 DLMSREGTCAPNSVSYSILIHGLCEVGR-------LEEAFGLKDQMGEKGCQPSTRTYTV 306
Query: 342 LLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
L++++ D GL+ + N ++ + G + Y + L + G+ +EA + +
Sbjct: 307 LIKALC-----DRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G P ITY+ +I G CK GR A +L ME+ C P+++T+ L++G C +
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+A+ +M++ D +VLI+G + +N AYKLL M L P TF
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSM-NSFDLEPDCLTFT 480
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQYISKFGTVEDASEFLKALSVK 575
+I + + A L LM ++ + + G DA L+ L
Sbjct: 481 AIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKM 540
Query: 576 EYPSSAAYLQVFESFFNEG 594
++ L V ++G
Sbjct: 541 RMLTTPHSLNVILDMLSKG 559
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 154/360 (42%), Gaps = 23/360 (6%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF WV +HS Y + N +L+++ R +V+ + +E + + +K+ F
Sbjct: 89 FFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECSRCEKEM-LKLISCF 147
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNS 370
+ R ++ F ++ P S LL S++ + DLG L + + E+ G
Sbjct: 148 DELR------EVSGFRLNYPCYSS------LLMSLAKL---DLGFLAYVTYRRMEADGFV 192
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ Y I AL K G + AE M + GF D+ + ++ G C+ DA V
Sbjct: 193 VGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKV 252
Query: 431 LDEMEENG-CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
D M G C P+ +++ILI G C ++ A +M EK VLI
Sbjct: 253 FDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ ++ A+ L EMI + +P T+ LI+ L ++EEA + R M K P
Sbjct: 313 DRGLIDKAFNLFDEMIAR-GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSV 371
Query: 550 EPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ I+ + G V A E L + + P+ + ++ E G+ Y+A LL +
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 123/577 (21%), Positives = 232/577 (40%), Gaps = 71/577 (12%)
Query: 92 KLTHESVVYVLR---KLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQF 148
++ H+ +V ++R + + + K + F+ + + FR + YS +L +L D
Sbjct: 120 RVAHDVIVALIRECSRCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLA 179
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKA--KKASDLAALNQFHDGMVKEIAMDNVAKTL 206
+VT RRM+ D + Y +I+ L K +A+++ G + + + V L
Sbjct: 180 YVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHI--VTSLL 237
Query: 207 VDVVLGSDWDDKIGKKLEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+ G + D + K + M E +S + ++ L E+ +A G +GE
Sbjct: 238 LGFCRGLNLRDAL-KVFDLMSREGTCAPNSVSYSILIHGLCEVGRLE-EAFGLKDQMGEK 295
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G + +T TY +++ L + +N+ +EM G + ++ TY + + +E+
Sbjct: 296 -GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEE 354
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + M+ PSV + L+ + + F + E + ++ +
Sbjct: 355 ANGVCRKMVKDGIFPSVITYNALINGYC--KDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L ++G+ +A ++K M + G PD ++Y+ +I GLC+ G A +L M
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDL 472
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA-- 497
PD T+T +I C + D A M+ K D LI+G + + A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALF 532
Query: 498 -YKLLVEM-------------------------------IEKVRLRPWQATFKTLIEKLL 525
+ LV+M I K+ L P T+ TL++ L+
Sbjct: 533 ILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLI 592
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSA 581
+ + + +L LMK P P+ + + +FG VE+A + L A+ P+
Sbjct: 593 RSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHV 652
Query: 582 AYLQVFESFFNEG--------------RHYEAKDLLY 604
Y + + + N G R YE D +Y
Sbjct: 653 TYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 116/252 (46%), Gaps = 13/252 (5%)
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K LG S Y + L + G + +M++ MK +G P+ Y+ +I GLC+
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
GR E+A +L M+++G P+ T+T++++G+ ++DRAL M+E+ Y+ + +
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 482 DVLINGF-LSQKRVN----GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
L+ GF LSQK + K L+ ++E++ L+ +L R +E+ L
Sbjct: 690 SSLLRGFVLSQKGIRETDPECIKELISVVEQLG-GSTSGLCIFLVTRLCKEGRTDESNGL 748
Query: 537 LRLMKKQNYPPFPEPFV-----QYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
++ + K F E + Y SK + L PS ++ V +
Sbjct: 749 VQTILKSGV--FLEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLK 806
Query: 592 NEGRHYEAKDLL 603
EG A++L+
Sbjct: 807 KEGDTERARELV 818
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 105/237 (44%), Gaps = 11/237 (4%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L + GR +EAEK++ AM+++G P+++TY+ ++ G G+ + A + M
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMV 678
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRAL--LCFAKMM---EKNYDADADLLDVLINGFLS 490
E G + + ++ L++G + + R C +++ E+ + + L L+
Sbjct: 679 ERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQLGGSTSGLCIFLVTRLCK 738
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+ R + + L+ +++ + ++E ++ + + L+ L+ K + P +
Sbjct: 739 EGRTDESNGLVQTILKSGVF--LEKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFK 796
Query: 551 PF---VQYISKFGTVEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F +Q + K G E A E ++ L+ + L E G E DL+
Sbjct: 797 SFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLV 853
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 147/340 (43%), Gaps = 13/340 (3%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++ +R + D + + + G + + TY I + + ME+A F+
Sbjct: 301 TYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA 360
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+D V + +++ ++ D + K ++ G S + Y + L K G
Sbjct: 361 LD------VISYTTVIKGLADSKRIDEAC--ELFEKLKTAGCSPNVVAYTAVIDGLLKAG 412
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R ++ K + M + P TY+ VI GLCKA DAC V ++M + GC+PD T+T
Sbjct: 413 RIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYT 472
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G A+++D A M+ K + A +++GF +N A +++ +M E+
Sbjct: 473 TLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRER 532
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVED 564
P F +L+ L R EEA +L M + P + + G V +
Sbjct: 533 -GCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPE 591
Query: 565 ASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
A ++ K P + Y + ++F G A ++L
Sbjct: 592 ARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEIL 631
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 154/350 (44%), Gaps = 18/350 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + N +L L + + + EM G E I +Y + M++
Sbjct: 14 TGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDE 73
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK-----S 374
A K F M+D +P V + L+ P +G + L +L +
Sbjct: 74 AYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHML--------LNQALKRFRPDVF 125
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G D K+++ M AG PD Y +I LCK GR ++A + + M
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM 185
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++GC+ D T+ LI+ ++D A + +M+E+ Y+ ++ D LI +V
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKV 245
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN-LLRLMKKQNYPPFP--EP 551
+ A ++ ++ K ++ + + +L++ R+++ + LL++++ N+P
Sbjct: 246 DEANEIYQTVVAK-KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNI 304
Query: 552 FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK 600
V S+ ++DA E K LS P++A Y + + ++ R EAK
Sbjct: 305 LVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAK 354
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 100/459 (21%), Positives = 197/459 (42%), Gaps = 30/459 (6%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE----TYLSILGVLKKAKKAS 181
+P++ Y+ +++ L + +RM+E + +E +Y +++ L +K+
Sbjct: 331 KPNAATYTTIIQGLYDA----------QRMEEAKAFFDEALDVISYTTVIKGLADSKRID 380
Query: 182 DLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMK------IELSDNF 234
+ L F + + VA T ++D +L + + K EDM +
Sbjct: 381 EACEL--FEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTV 438
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
V+ L + ++ P F + V G +TITY ++ ++ + + +++ M
Sbjct: 439 VIDGLCKAQMLPDACKVFEQMV--QKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLT 496
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+G E TY I F K M+ +A ++ M + +P + + LL S +
Sbjct: 497 KGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEE 556
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
++V + + G + +Y + L GR EA + +M G PD +TY +
Sbjct: 557 A--YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
I K G E A +L+ M ++G PD + L+ G+ VD+A + +M+
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+A +VL++G + + A+ L EM+EK + P ++ LI+ L A R+ EA
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734
Query: 535 NLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
+ + M + P + I +K G + +A + ++
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVE 773
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 43/323 (13%)
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ ++EM G D+ + K R ++ A++LF M +P++ + ++ +
Sbjct: 6 DCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGL 65
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+SI+ + DEA K +M + G EP
Sbjct: 66 ASID-------------------------------------KMDEAYKFFNSMIDNGCEP 88
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D I ++ +I G CKAG+ + +L++ + PD+ +T +I G+C A ++D
Sbjct: 89 DVIAFTTLIHGFCKAGQPQVGHMLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGFKIL 147
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+M+ DA VLI+ RV+ AY+L M + L + TF TLIE L
Sbjct: 148 EEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDY-VTFMTLIEALSN 206
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSVKEYPSS-AA 582
+L+EA L R M ++ Y P+ E + + K G V++A+E + + K+ +S A
Sbjct: 207 HGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVATSRVA 266
Query: 583 YLQVFESFFNEGRHYEAKDLLYK 605
Y + + + GR + LL +
Sbjct: 267 YNSLMDGYCKLGRVDDGLKLLLQ 289
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/411 (22%), Positives = 169/411 (41%), Gaps = 15/411 (3%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ T Y++++ L L +M + C + TY +++ KA K +
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEA--- 487
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE---DMKIELSDN--FVLTVLKE 241
+ D M+ + + A T +V G D I + E M+ + F+ T L
Sbjct: 488 RKLLDVMLTK-GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLS 546
Query: 242 LRIYPVKALGFFRWVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ +A ++ + E + G + I Y ++ +L V + +V + M ++G
Sbjct: 547 YYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAP 606
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D TY I + F K +E A ++ E M P + L+ + D F
Sbjct: 607 DALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA--FG 664
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGL 418
V ++ + G + ++ + L K G+ D A + K M + P ++Y+ +I GL
Sbjct: 665 VYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGL 724
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
KAGR +A + EM + G IP+ T+T LI A + A M++ + D
Sbjct: 725 GKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDV 784
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
LI G + V+ A+ + EM+++ P + T+K L A R
Sbjct: 785 QAYSALITGLIDSSMVDTAWDVFQEMMKR-GCAPNEVTYKVLRRGFRAAGR 834
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 119/271 (43%), Gaps = 29/271 (10%)
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+EA +K M G PD + + V+ GLCKA + + A + EM GC P I ++
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I G + +++D A F M++ + D LI+GF + + LL + ++
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALK-- 118
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDA 565
R RP + ++I A L+ +L M P + + + K G V++A
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178
Query: 566 SEFL----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC------PHHIRQDSK 615
E K+ + +Y ++ + E+ N G+ EA +L + P+ QD
Sbjct: 179 YELFERMRKSGCLGDY---VTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQD-- 233
Query: 616 ISLLFGSAKSNKV--------TIPSRKESTS 638
SL+F K+ KV T+ ++K +TS
Sbjct: 234 -SLIFALCKAGKVDEANEIYQTVVAKKVATS 263
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 109/496 (21%), Positives = 206/496 (41%), Gaps = 27/496 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+K P S YSL++ ++ + + L MK+ TY I+ L +
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL- 432
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
Q + +++E+ M+ + V K G+ +E+ ++ L +L +
Sbjct: 433 ------QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGR-VEESRMILERMREQGILPD 485
Query: 242 LRIYPVKALGFFRW--VGEHSGY---------KHNTITYNGILRVLARHESVRDFWNVVE 290
+ Y +GF + + E Y + N TY + ++ +
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN 350
EM G ++ Y + K + +A +F F++ VQ S+L+ +S
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLS--R 603
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
N + F + ++ + G + Y+ + K G D+A ++++ M G PD +T
Sbjct: 604 NGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVT 663
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I GLCKAG E A N+ D++E G P+ T+ ++ G+C + A +M+
Sbjct: 664 YNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEML 723
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+ DA + +V++N +++ A L EM+EK +F TLIE + +L
Sbjct: 724 LRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS--TVSFNTLIEGYCKSGKL 781
Query: 531 EEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASE-FLKALSVKEYPSSAAYLQV 586
+EA +LL M ++ + P + I K G + +A +L+ P++ Y +
Sbjct: 782 QEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSL 841
Query: 587 FESFFNEGRHYEAKDL 602
+ N G E L
Sbjct: 842 LHGYHNIGNMSEVSAL 857
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 120/509 (23%), Positives = 216/509 (42%), Gaps = 39/509 (7%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLKKA 177
+FRPS + +L +L+ + ++ FW M + TY +++ G +K A
Sbjct: 184 EFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDA 243
Query: 178 KKA-SDLAALNQFHDGMVKEIAMDNVAKTLV------DVVLGSDWDDKIGKKLEDMKIEL 230
K+ ++ + D + E+ V K LV D+++ +K ++ + M +E+
Sbjct: 244 KRVLLEMGEKARLLDEAI-ELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEM 302
Query: 231 SDNFVLTVLKELRIYPVKALGF---------FRWVGE--HSGYKHNTITYNGILRVLARH 279
D + + E Y GF FR E G + N I +N +L + +
Sbjct: 303 ID---VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKA 359
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
+ +++EM ++G E D TY + + + M A +L + M P+V
Sbjct: 360 GKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 419
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS--VYDGIHRALTKLGRFDEAEKMMK 397
S+++ + N L A E + N L + VY + A K GR +E+ +++
Sbjct: 420 SVIINGLCRCGN----LQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILE 475
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M+ G PD Y+ +I G CKA R E+A L EM E P+ T+ I G+ A
Sbjct: 476 RMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAG 535
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
E++ A F +M+ + + LI G + V A+ + ++ + L+ Q T+
Sbjct: 536 EMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ-TY 594
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSV 574
LI L ++ EA + ++++ P + IS K G V+ AS+ L+ + +
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654
Query: 575 KEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
K P Y + + G AK+L
Sbjct: 655 KGINPDIVTYNILIDGLCKAGEIERAKNL 683
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 124/298 (41%), Gaps = 29/298 (9%)
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
Y P+ S L++ I ++ L ++ + Y S S + ++D + + K+G E
Sbjct: 117 YGPA----SDLIKCIIRNSDSPLAVLGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVE 172
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + KN F P ++ + ++ L K + E V D M + +PD+ T+T +I
Sbjct: 173 AVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMIS 232
Query: 452 GHCAANEV-----------------DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
HC V D A+ M++K D D+LINGF +KR
Sbjct: 233 AHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRS 292
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
A +L+EMI+ V L+P T+ LI+ + +E+A + M
Sbjct: 293 REAKLMLLEMID-VGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNT 351
Query: 552 FVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF---NEGRHYEAKDLLYK 605
+ + K G +E A E ++ + K P S Y + E N R +E D + K
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 409
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 149/366 (40%), Gaps = 64/366 (17%)
Query: 234 FVLT--VLKELRIYPV------------KALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
F+L+ VL++++ Y V +A G F + E G N TYN ++ +
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE-KGLLPNAFTYNSLISGSCKQ 639
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE-------------- 325
+V ++EEM +G DI TY + K +E A LF+
Sbjct: 640 GNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTY 699
Query: 326 -FMMDGPYKPSVQDCS------LLLRSISSINNPD---LGLVFRVANKYESLGNSL---- 371
M+DG K + +LLR + PD ++ K E +L
Sbjct: 700 AAMVDGYCKSKNPTAAFQLLEEMLLRGVP----PDAFIYNVILNFCCKEEKFEKALDLFQ 755
Query: 372 --------SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
S ++ + K G+ EA +++ M F P+++TY+ +I CKAG
Sbjct: 756 EMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGM 815
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A + EM+E +P KT+T L+ G+ + F +M+ K + D V
Sbjct: 816 MGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYV 875
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK-------TLIEKLLGARRLEEAMNL 536
+I+ + + V A KL E++ V+ P ++ F+ + A ++EA +
Sbjct: 876 MIDAYCREGNVMEACKLKDEIL--VKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEV 933
Query: 537 LRLMKK 542
LR M K
Sbjct: 934 LRSMVK 939
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 154/361 (42%), Gaps = 43/361 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITY ++ R V +++EM+ G D+ TY + K +++A+K
Sbjct: 238 DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDL------------- 354
M +P+V +++LRS+ S +P +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 355 GLVFRVANKYESLG------NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
GL+ R + E + NSLS Y+ + K + D A + ++ M + G PD
Sbjct: 358 GLLGRAIDILEKMPQHGCQPNSLS---YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ ++ LCK G+ EDA +L+++ GC P + T+ +I G A + +A+ +
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M K+ D L+ G + +V+ A K E E++ +RP TF +++ L +R
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGIRPNAVTFNSIMLGLCKSR 533
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQ 585
+ + A++ L M + P + I G ++A E L L K ++ Q
Sbjct: 534 QTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593
Query: 586 V 586
V
Sbjct: 594 V 594
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 160/346 (46%), Gaps = 10/346 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SG + ITYN ++ + + + +V++ M D+ TY I R +
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 220
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A+++ + M+ P V ++L+ + + + +G ++ ++ G + Y+
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEA--TCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K GR DEA K + M ++G +P+ IT++ ++ +C GR+ DA +L +M
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T+ ILI C + RA+ KM + ++ + L++GF +K+++ A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L M+ + P T+ T++ L ++E+A+ +L + + P + +
Sbjct: 399 IEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
++K G A + L + K+ P + Y + EG+ EA
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 16/292 (5%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
RQ + +E+ K E M+ P + C+ L+R LG + A E L
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR-----LGKTRKAAKILEILE 164
Query: 369 NSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S + Y+ + K G + A ++ M PD +TY+ ++ LC +G+ +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A VLD M + C PD+ T+TILI+ C + V A+ +M ++ D +VL+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + R++ A K L +M +P T ++ + R +A LL M ++ +
Sbjct: 282 NGICKEGRLDEAIKFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNE 593
P F + ++ + G + A + L+ + P+S +Y + F E
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 117/265 (44%), Gaps = 33/265 (12%)
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
A K+E+L + S S +G + ++ N+ F +++ + + + +
Sbjct: 72 AQKFETLSSGYSNSNGNGHYSSV-----------------NSSFALEDVESNNHLRQMVR 114
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME--KNYDADA 478
G E+ L+ M +G +PDI T LI+G C + +A AK++E + A
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKA----AKILEILEGSGAVP 170
Query: 479 DLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D++ +V+I+G+ +N A +L +++ + P T+ T++ L + +L++AM +
Sbjct: 171 DVITYNVMISGYCKAGEINNALSVL----DRMSVSPDVVTYNTILRSLCDSGKLKQAMEV 226
Query: 537 L-RLMKKQNYPPFP--EPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFN 592
L R++++ YP ++ + V A + L + + P Y +
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286
Query: 593 EGRHYEAKDLLYKCPHHIRQDSKIS 617
EGR EA L P Q + I+
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVIT 311
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 170/400 (42%), Gaps = 46/400 (11%)
Query: 237 TVLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
TV+K L I KA+ F V G + + Y ++ L + D + +++EM+
Sbjct: 159 TVMKGLCINGEVQKAMDFHDNVAAQ-GMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEG 217
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
+ + +I Y I F K + A L+ ++D P + + L+R
Sbjct: 218 QVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG--QW 275
Query: 355 GLVFRVANKYESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
G V ++ E + +++ +VY + + A + G+ EA+ M M G +PD +T++
Sbjct: 276 GEVKQLM--CEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFN 333
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
+I G C G +A + D + E G +PD+ ++TILI G+C +D A+ F +M K
Sbjct: 334 TLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCK 393
Query: 473 NYDADADLLDVLINGFLSQKRVNGA------------------YKLLVEMIEKVR----- 509
N D L LI+G R++ A Y +L++ K++
Sbjct: 394 NMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMG 453
Query: 510 -----------LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
L P T+ LI ++R+ EAMNLL +M+ +N P +
Sbjct: 454 IELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDG 513
Query: 556 ISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
+ K G + DA E K + V P A V F + +
Sbjct: 514 LCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/437 (20%), Positives = 173/437 (39%), Gaps = 59/437 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K+ ++P++ + +++ L +++ + ++E Y +++ L K ++
Sbjct: 147 KRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSI 206
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
D L Q +G ++ N+ + ++++ S D++ K D+ +++ D + + +
Sbjct: 207 DAFQLLQEMEG---QVVKPNIV--IYNMIIDSFCKDELTCKARDLYLKIVD---MGIDPD 258
Query: 242 LRIYPVKALGFFR---WVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ Y GF R W GE + N T+N ++ R + + +
Sbjct: 259 ILTYTSLIRGFCRTGQW-GEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMF 317
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
M K G + DI T+ + + +A KLF+ + + P V ++L+
Sbjct: 318 NLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI------ 371
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
K R DEA + M+ D +
Sbjct: 372 -------------------------------IGYCKCKRIDEAVSLFNEMRCKNMVLDIV 400
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
YS +I GLCK+GR A + + +G P++ T+ ILI C ++D + F M
Sbjct: 401 LYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLM 460
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
K ++LING+ KR+ A LL M K L P T+ +L + L + R
Sbjct: 461 CGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSK-NLAPDSITYNSLFDGLCKSGR 519
Query: 530 LEEAMNLLRLMKKQNYP 546
+ +A L ++M P
Sbjct: 520 ISDAWELFKVMHVGGPP 536
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 94/235 (40%), Gaps = 3/235 (1%)
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
K + A+ L + M+ PS+ S+ + + ++G F V G +
Sbjct: 96 KMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLG--EMGFAFSVLGIVLKRGYQPN 153
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
+ + L G +A + G D + Y +I GLCK GR DA +L
Sbjct: 154 NITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQ 213
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EME P+I + ++I C +A + K+++ D D LI GF
Sbjct: 214 EMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +L+ EM+ K + P TF LI+ ++ EA + LM K+ P
Sbjct: 274 QWGEVKQLMCEMVNK-NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQP 327
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM-DGPYKPSVQDCSLLLRSISS 348
EM+ + +DI Y + K + A +LF + DGP P+V ++L+ +
Sbjct: 388 NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGP-PPNVITYNILIDAFCK 446
Query: 349 INNPDLGL-VFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
I + D+G+ +F++ G L+ +V Y+ + K R EA ++ M++
Sbjct: 447 IQDIDMGIELFKLM-----CGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLA 501
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
PD+ITY+ + GLCK+GR DA + M G D+ T+ +L+ C A +V
Sbjct: 502 PDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 144/318 (45%), Gaps = 20/318 (6%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +TYN IL+ + + ++ + +++M++ G D TY + + K M A
Sbjct: 383 GVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKA 442
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY--DG 378
++ + M K + +L + V + ++ +L S SK Y D
Sbjct: 443 FRMMDEMTSKGLKIDTWTLNTILHCLC---------VEKKLDEAYNLLCSASKRGYILDE 493
Query: 379 IHRALTKLGRF-----DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ + LG F D A + MK P ITY+ VI GLC++ + + A + L+E
Sbjct: 494 VSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNE 553
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M ENG +PD T+ I+I G C V++A +M+E + D ++L+ G +
Sbjct: 554 MLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGM 613
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF- 552
+ A KL ++ K + T+ T+I L + E A +LL M+ + P +
Sbjct: 614 LEKALKLFNTLVSKGK-DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYK 672
Query: 553 --VQYISKFGTVEDASEF 568
+ ++ G +++A EF
Sbjct: 673 VIIAALTDAGRIKEAEEF 690
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 157/354 (44%), Gaps = 43/354 (12%)
Query: 255 WVGEHS--GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
WV + S G +T++YN IL L + +++ +++ +MK +G + TY + +
Sbjct: 235 WVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYC 294
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
+ ++++A K+ E M P+V ++L+ N+ + FR+ ++ E +
Sbjct: 295 RLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC--NDGKIDEAFRIRDEMEKMNVLPD 352
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y+ + ++ E +++ M G + + +TY+ ++ +CK G +A LD
Sbjct: 353 VVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLD 412
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+MEENG PD T+ LI +C A ++ +A +M K D L+ +++ +K
Sbjct: 413 KMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEK 472
Query: 493 RVNGAYKLLV-----------------------------------EMIEKVRLRPWQATF 517
+++ AY LL EM E+ ++ P T+
Sbjct: 473 KLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKER-QIMPSTITY 531
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEF 568
++I L +R++++A++ L M + P + I F G VE A +F
Sbjct: 532 NSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQF 585
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 181/450 (40%), Gaps = 94/450 (20%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
DKK + ++ Y+++L+ + K ++ + TL +M+E+ + TY +++G KA K
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439
Query: 181 SDLAALNQFHDGMVKEIAMDN-VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
A + K + +D T++ + + KKL++ + N + +
Sbjct: 440 G--KAFRMMDEMTSKGLKIDTWTLNTILHCLC-------VEKKLDE-----AYNLLCSAS 485
Query: 240 KELRI-----YPVKALGFFR----------W-VGEHSGYKHNTITYNGILRVLARHESVR 283
K I Y + LG+F+ W + +TITYN ++ L + V
Sbjct: 486 KRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVD 545
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + EM + G D TY I F +E A + M++ +KP V C++LL
Sbjct: 546 QAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILL 605
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
R L + G ++A K+ + + G
Sbjct: 606 R-------------------------------------GLCREGMLEKALKLFNTLVSKG 628
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ D +TY+ +I LCK G+FE+A ++L EME PD T+ ++I A + A
Sbjct: 629 KDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAE 688
Query: 464 LCFAKMMEKNYDADADL-----LDVL------------------INGFLSQKRVNGAYKL 500
KM+E D +L +VL IN +Q + A L
Sbjct: 689 EFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAMHL 748
Query: 501 LVEMI-EKVRLRPWQATFKTLIEKLLGARR 529
VE+ E V L + T+ L+E L+ R+
Sbjct: 749 FVEVTKEGVALNKY--TYLNLMEGLIKRRK 776
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
NK G Y+ I AL K EA ++ MK+ G P+ TY+ ++ G C+
Sbjct: 236 VNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCR 295
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G ++A V++ M N +P + T+ +L+ G C ++D A +M + N D
Sbjct: 296 LGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVT 355
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ LI+G SQ R + L+E ++K ++ T+ +++ + + EA L M
Sbjct: 356 YNTLIDG-CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKM 414
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLKA 571
++ P V Y + G A + KA
Sbjct: 415 EENGLSP---DCVTYNTLIGAYCKAGKMGKA 442
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 137/314 (43%), Gaps = 13/314 (4%)
Query: 291 EMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI- 349
E KE + I Y+++ + A ++F M Y+P++ C+ L+ S+
Sbjct: 137 EPSKELLDTSIGAYVQMDQPHL-------ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYP 189
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
++ + L +V LG + + ++ + + +A + M G PD +
Sbjct: 190 SSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTV 249
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
+Y+ ++ L K ++A ++L +M+ G P+ T+ +L+ G+C + A M
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
N ++L+NGF + +++ A+++ EM EK+ + P T+ TLI+ R
Sbjct: 310 TRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEM-EKMNVLPDVVTYNTLIDGCSQWRD 368
Query: 530 LEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQ 585
E +L+ M K+ + ++++ K G + +A+ L + P Y
Sbjct: 369 SSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNT 428
Query: 586 VFESFFNEGRHYEA 599
+ ++ G+ +A
Sbjct: 429 LIGAYCKAGKMGKA 442
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T+N +L L + + + N+ +E+ +G ++ +Y I + + A K++
Sbjct: 366 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 425
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+D + P+ ++L+ D+ F + ++ + + + I + L
Sbjct: 426 KEMLDNGFTPNAVTFTILMDGY--FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 483
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR E + + GF P + Y+ +I G K G A NV EM E G P
Sbjct: 484 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 543
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G C N +D AL M K D LI+GF ++ + A++LL E+
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGT 561
L P + + ++I +EEA++L + M + P + + I K G
Sbjct: 604 -RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 662
Query: 562 VEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ AS+ + LS P A+ + N+G+ A+ +L
Sbjct: 663 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 705
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 175/417 (41%), Gaps = 45/417 (10%)
Query: 75 ACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSL 134
AC+ DE+ K +SP + + + + ++ A + + D F P++ +++
Sbjct: 386 ACNLWDEVIAK--GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN-GFTPNAVTFTI 442
Query: 135 MLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL--GVLKKAKKASDLAALNQFHDG 192
++ K ++ + RMK D + +T L I+ G+ K + N+F
Sbjct: 443 LMDGYFKKGDIENAFSIFHRMK-DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF--- 498
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
V++ V + ++ I +++ I L+ N V + E+ I P
Sbjct: 499 ---------VSQGFVPTCM--PYNTIIDGFIKEGNINLASN-VYREMCEVGITP------ 540
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+T+TY ++ + ++ ++ +MK++G +MDI Y + F
Sbjct: 541 ------------STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNS 370
K R M+ A +L + P+ + ++ ++NN + + L ++ N+ G
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE----GIP 644
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y + L K GR A + M + G PD+ ++ +I GLC G+FE+A +
Sbjct: 645 CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKI 704
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L++M IP + + LI GH + A +M+++ D D+L+NG
Sbjct: 705 LEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
P+ G + + + G + + + A K G EA ++ M N G +
Sbjct: 207 PNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVA 266
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ G C G A +++E+ E+G +P+ T+++LI G C +++A +++M
Sbjct: 267 TSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 326
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + L+ ++ G+L + A+ + + +E + TF TL+ L ++
Sbjct: 327 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF--TFNTLLSWLCKEGKMN 384
Query: 532 EAMNL 536
EA NL
Sbjct: 385 EACNL 389
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 62/157 (39%), Gaps = 1/157 (0%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G EAE+ K G E D YS + LC A ++L EM G IP T+
Sbjct: 172 GNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTF 231
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T +I V AL M+ + + L+ G+ Q + A +LV I
Sbjct: 232 TSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL-VLVNEIS 290
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ L P + T+ LI+ +E+A MK +
Sbjct: 291 ESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 327
>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
Length = 1013
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 134/576 (23%), Positives = 234/576 (40%), Gaps = 51/576 (8%)
Query: 77 DW------SDELENKL-----EELSPK-LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ 124
DW +DE+++ L + LSP +T+ ++ L K N E ++K
Sbjct: 352 DWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEM--EEKS 409
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
P+ +S ++ V + L + R MKE TY +++ K + A
Sbjct: 410 ISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQD--A 467
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVD-VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
AL +HD + + + V K +VD +V G + KI + + K L +
Sbjct: 468 ALEVYHDMLCEGV---KVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVN--- 521
Query: 244 IYPVKALGFFRWVGEHSGYKH-----------NTITYNGILRVLARHESVRDFWNVVEEM 292
Y G F+ + +K + + YN + L ++ + + EM
Sbjct: 522 -YTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEM 580
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
+ G + D TY + + A+KL M KP++ + L+ +
Sbjct: 581 RNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGT--- 637
Query: 353 DLGLVFR---VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
G V + + N+ S G S S + + +A ++ R D + + M NAG D
Sbjct: 638 --GAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADIT 695
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
Y+ ++ LC G A VL+EM +G PD T+ LI GHC ++ +D A +A+M
Sbjct: 696 VYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQM 755
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ +N + + L+ G S R+ A +L+EM EK L P T+ L
Sbjct: 756 LHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEM-EKSGLEPNNLTYDILATGHGKQSN 814
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQ 585
EAM L M + + P + IS F G + A E K + + +P+S Y
Sbjct: 815 KVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDI 874
Query: 586 VFESFFNEGRHYEAKDLLYK---CPHHIRQDSKISL 618
+ +++ R ++++ + C R SKI++
Sbjct: 875 LVSGWYDLAREQKSQNTYFTEIYCFSASRHQSKIAI 910
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 145/355 (40%), Gaps = 25/355 (7%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ I +N ++ R +V + M +G MD+ Y + F + ++ A +
Sbjct: 168 DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVL 227
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHR 381
+ M + P+V + + V + YE + G L +
Sbjct: 228 DMMKEAGVDPNVATYTPFIVYYCRTKG-----VEEAFDLYEGMVRNGVLLDVVTLSALVA 282
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L + GRF EA + + M G P+++TY +I L KAGR ++ ++L EM G +
Sbjct: 283 GLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVM 342
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
D+ T+T L+ + D + N + VLI+ V+ A ++L
Sbjct: 343 DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVL 402
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGT 561
+EM EK + P TF ++I + L++A R+MK++ P + +GT
Sbjct: 403 LEMEEK-SISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP-------NVVTYGT 454
Query: 562 VEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
+ D F K + A L+V+ EG K ++ + +RQ+ KI
Sbjct: 455 LIDG--FFK------FQGQDAALEVYHDMLCEGVKVN-KFIVDSLVNGLRQNGKI 500
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/390 (21%), Positives = 151/390 (38%), Gaps = 49/390 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A FR + + G N +TY ++ LA+ ++ +++ EM G MD+ TY +
Sbjct: 292 EAYALFREM-DKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTAL 350
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K ++ F + P+ G+ + V
Sbjct: 351 MDWLGKQGKTDEVKDTLRFALSDNLSPN-------------------GVTYTV------- 384
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ AL K DEAE+++ M+ P+ +T+S VI G K G + A
Sbjct: 385 -----------LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKA 433
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
M+E G P++ T+ LI G D AL + M+ + + ++D L+NG
Sbjct: 434 TEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNG 493
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ A L + L + TLI+ L A + A + + +N P
Sbjct: 494 LRQNGKIEEAMALFKDA-SGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLP 552
Query: 548 ---FPEPFVQYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
F+ + G ++A FL + ++ P + Y + S +G +A LL
Sbjct: 553 DAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLL 612
Query: 604 YKC------PHHIRQDSKISLLFGSAKSNK 627
++ P+ I ++ ++ LFG+ K
Sbjct: 613 HEMKMSSIKPNLITYNTLVAGLFGTGAVEK 642
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/367 (20%), Positives = 140/367 (38%), Gaps = 44/367 (11%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ T+ YN +L L+ H V+ EM K G D T + + ++ A
Sbjct: 100 RPTTVAYNILLAALSDHAHAP---AVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
L + G + V + L+ + + L VA++ + G + Y+ +
Sbjct: 157 LAD-RGGGIHALDVIGWNTLIAGYCRVGDTPAAL--SVADRMTAQGLPMDVVGYNTLVAG 213
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
+ G+ D A ++ MK AG +P+ TY+ I C+ E+A ++ + M NG + D
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T + L+ G C A F +M + + LI+ R LL
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333
Query: 503 EMIEKV----------------------------------RLRPWQATFKTLIEKLLGAR 528
EM+ + L P T+ LI+ L A
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYL 584
++EA +L M++++ P F I+ F G ++ A+E+ + + + P+ Y
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453
Query: 585 QVFESFF 591
+ + FF
Sbjct: 454 TLIDGFF 460
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/361 (23%), Positives = 153/361 (42%), Gaps = 43/361 (11%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ITY ++ R V +++EM+ G D+ TY + K +++A+K
Sbjct: 238 DVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDL------------- 354
M +P+V +++LRS+ S +P +
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRK 357
Query: 355 GLVFRVANKYESLG------NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
GL+ R + E + NSLS Y+ + K + D A + ++ M + G PD
Sbjct: 358 GLLGRAIDILEKMPKHGCQPNSLS---YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+TY+ ++ LCK G+ EDA +L+++ GC P + T+ +I G A + +A+ +
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M K+ D L+ G + +V+ A K E E++ +RP TF +++ L R
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHE-FERMGVRPNAVTFNSIMLGLCKTR 533
Query: 529 RLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSSAAYLQ 585
+ + A++ L M + P + I G ++A E L L K ++ Q
Sbjct: 534 QTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQ 593
Query: 586 V 586
V
Sbjct: 594 V 594
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 160/346 (46%), Gaps = 10/346 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E SG + ITYN ++ + + + +V++ M D+ TY I R +
Sbjct: 164 EGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKL 220
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A+++ + M+ P V ++L+ + + + +G ++ ++ G + Y+
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEA--TCRDSGVGQAMKLLDEMRDRGCTPDVVTYN 278
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K GR DEA K + M ++G +P+ IT++ ++ +C GR+ DA +L +M
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRK 338
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T+ ILI C + RA+ KM + ++ + L++GF +K+++ A
Sbjct: 339 GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRA 398
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L M+ + P T+ T++ L ++E+A+ +L + + P + +
Sbjct: 399 IEYLERMVSR-GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVID 457
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
++K G A + L + K+ P + Y + EG+ EA
Sbjct: 458 GLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEA 503
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 133/304 (43%), Gaps = 16/304 (5%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
RQ + +E+ K E M+ P + C+ L+R +G + A E L
Sbjct: 110 RQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR-----MGKTRKAAKILEVLE 164
Query: 369 NSLSKS---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S + Y+ + K G + A ++ M PD +TY+ ++ LC +G+ +
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLK 221
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A VLD M + C PD+ T+TILI+ C + V +A+ +M ++ D +VL+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + R++ A K L +M +P T ++ + R +A LL M ++ +
Sbjct: 282 NGICKEGRLDEAIKFLNDM-PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKD 601
P F + ++ + G + A + L+ + P+S +Y + F E + A +
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 602 LLYK 605
L +
Sbjct: 401 YLER 404
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 103/225 (45%), Gaps = 16/225 (7%)
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
N+ F +++ + + L + G E+ L+ M +G +PDI T LI+G C +
Sbjct: 95 NSSFVLEDVESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTR 154
Query: 461 RALLCFAKMME--KNYDADADLL--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+A AK++E + A D++ +V+I+G+ +N A +L +++ + P T
Sbjct: 155 KA----AKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL----DRMSVSPDVVT 206
Query: 517 FKTLIEKLLGARRLEEAMNLL-RLMKKQNYPPFP--EPFVQYISKFGTVEDASEFLKALS 573
+ T++ L + +L++AM +L R++++ YP ++ + V A + L +
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR 266
Query: 574 VKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS 617
+ P Y + EGR EA L P Q + I+
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVIT 311
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 98/458 (21%), Positives = 188/458 (41%), Gaps = 40/458 (8%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
L+ND A + FN + KK R + Y+ ++ L + + ++M+ED CY
Sbjct: 16 LNNDVNSAFSVFNMM-PKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTV 74
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI--GKK 222
TY I+ L ++ + + A+N F + ++E + T ++ + K+ G++
Sbjct: 75 RTYTVIVHALFESGRR--MEAINLFSE--MRERGCEPNIHTYTVMINAMCKETKLEEGRR 130
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+ D +E G + TYN ++ + V
Sbjct: 131 ILDEMVE------------------------------KGLVPSVPTYNALIDGYCKEGMV 160
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+++ M + TY ++ F + + + A+ L M++ PSV + L
Sbjct: 161 EAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSL 220
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA 402
+ I D +R+ N G + Y L K GR +EA + ++K
Sbjct: 221 IHGQCKIGYLDSA--YRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G + + + Y+ +I G CKAG+ +DA ++LD M C+P+ T+ LI G C +V A
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
LL M++K +LI L + + A+++L +M+ +P + I
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSS-GYQPDVYIYTAFIH 397
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
++EA +++ +M ++ P + I +G
Sbjct: 398 AFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYG 435
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 40/292 (13%)
Query: 351 NPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
N D+ F V N G ++ Y + L ++GR DE + K M+ P T
Sbjct: 17 NNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRT 76
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ ++ L ++GR +A N+ EM E GC P+I T+T++I C +++ +M+
Sbjct: 77 YTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMV 136
Query: 471 EKN--------------------YDADADLLDV---------------LINGFLSQKRVN 495
EK +A ++LD+ LI GF +K V+
Sbjct: 137 EKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVH 196
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPF 552
A LL +M+E RL P T+ +LI L+ A LL LM + P F
Sbjct: 197 RAMALLSKMLES-RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVF 255
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
+ + K G +E+A+ +L K ++ Y + + + G+ +A LL
Sbjct: 256 IDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/436 (21%), Positives = 176/436 (40%), Gaps = 41/436 (9%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P YS+ + L K +++ V +KE E Y +++ KA K D
Sbjct: 247 PDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA--- 303
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTV-LKELRIY 245
N D M+ E + N + T ++ G + K+ + L M+ + TV + I
Sbjct: 304 NSLLDRMLTEDCLPN-SSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIV 362
Query: 246 PVKALGFFRWVGE------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
+ G F + SGY+ + Y + ++++ +++ M + G
Sbjct: 363 AMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMP 422
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR--------------- 344
D TY + + ++ A + + M D PS S L++
Sbjct: 423 DALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVA 482
Query: 345 ---SISSINNPDLGLVFRVANKYESL----------GNSLSKSVYDGIHRALTKLGRFDE 391
SI ++ D+ V+++ K+E+ G S + + Y + L K+GR
Sbjct: 483 LCDSIPNVFFADVADVWKMM-KFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGV 541
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A+K+ M G P Y+ ++ C+ G + DA ++ M E+G +P +++ +L
Sbjct: 542 AQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFC 601
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G ++A + F+ +++ Y+ D +LI+G L +G +LL M E +
Sbjct: 602 GLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVM-EARGCQ 660
Query: 512 PWQATFKTLIEKLLGA 527
T++ LIE L G
Sbjct: 661 IHPQTYRMLIEGLDGT 676
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 171/366 (46%), Gaps = 26/366 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ +T T+ ++R + + + ++ ++M EG+ D+ TY + K A
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++L M+ +P+V + ++ S+ + + F + ++ + G S Y+ +
Sbjct: 186 IRLLGSMVQKNCQPNVFAYNTIIDSLCK--DRQVTEAFNLFSEMVTKGISPDIFTYNSLI 243
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL L + ++ M ++ PD ++++ V+ LCK G+ +A +V+D+M + G
Sbjct: 244 HALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVE 303
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA--Y 498
P++ T+T L+ GHC +E+D A+ F M+ K + + LING+ +R++ A Y
Sbjct: 304 PNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHY 363
Query: 499 KLLVE-------MIEKVRL---------RPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L++ M E V++ P ++ TLI +R+++AM L M +
Sbjct: 364 TXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 423
Query: 543 QNYPPFPEPFVQYISKFGTVE---DA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHY- 597
Q P + I VE DA + F + ++ + P+ Y ++ + + R+
Sbjct: 424 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY-RILLDYLCKNRYLA 482
Query: 598 EAKDLL 603
EA LL
Sbjct: 483 EAMALL 488
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 3/214 (1%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
P++ +L+ S +N +G F V K LG+ + + + R + G+ EA
Sbjct: 94 PNIYTLHILINSFCHLNR--VGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEAL 151
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ M GF PD +TY +I GLCK G A +L M + C P++ + +I
Sbjct: 152 HLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSL 211
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
C +V A F++M+ K D + LI+ + LL EM++ ++ P
Sbjct: 212 CKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS-KIMPD 270
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+F T+++ L ++ EA +++ M ++ P
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 5/211 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M + G P+ T +I C R A +VL ++ + G PD T+T LI+G C +
Sbjct: 87 MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ AL F KM+ + + D LING + A +LL M++K +P +
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPNVFAYN 205
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED----ASEFLKALSV 574
T+I+ L R++ EA NL M + P + I + + A+ + +
Sbjct: 206 TIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDS 265
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K P ++ V ++ EG+ EA D++ K
Sbjct: 266 KIMPDVVSFNTVVDALCKEGKVTEAHDVVDK 296
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 39/274 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N I+YN ++ + + + + EM ++ D TY + ++DA
Sbjct: 390 GCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDA 449
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF M+ CS + P+L + +R+ Y L K+ Y
Sbjct: 450 IALFHEMVA---------CSQI---------PNL-VTYRILLDY------LCKNRY---- 480
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
EA ++KA++ + +PD + I G+C+AG E A ++ + G
Sbjct: 481 --------LAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQ 532
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T++I+I G C +D A F +M E + + + + GFL + A +L
Sbjct: 533 PDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQL 592
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
L EM+ R A+ TL K+L L++++
Sbjct: 593 LQEMV--ARGFSADASTMTLFVKMLSDDGLDQSL 624
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 62/142 (43%), Gaps = 1/142 (0%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K ++ +M+ G P+I T ILI C N V A
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
AK+++ + D LI G + ++ A L +MI + RP T+ TLI L
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGE-GFRPDVVTYGTLINGLC 177
Query: 526 GARRLEEAMNLLRLMKKQNYPP 547
A+ LL M ++N P
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQP 199
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 157/343 (45%), Gaps = 7/343 (2%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I +N IL L + + + ++M+ G + ++ + F + ++ A +F
Sbjct: 88 IEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAK 147
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++ Y P+ + L++ + L F +K +LG ++ Y + L K+
Sbjct: 148 ILKMGYNPNTITFTTLIKGLCLKGQIHQALNFH--DKLVALGFQFNQISYGTLIDGLCKV 205
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G A +++ + +P+ + YS +I G+CK DA ++ EM G P++ T+
Sbjct: 206 GETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 265
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ LI G ++ A+ F KM+ +N D ++L++ F +++ A KL+ EM +
Sbjct: 266 SALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHD 325
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVE 563
+ + P T+ ++++ L R+++A+ LL +K Q P + I G +E
Sbjct: 326 RGQ-PPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLE 384
Query: 564 DASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLYK 605
DA + L VK Y + Y+ +F F +G EA LL K
Sbjct: 385 DARNIFEDLLVKGYDITVVTYIVMFYGFCKKGLFDEASALLSK 427
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 100/214 (46%), Gaps = 2/214 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y+ I+ + + + V D +++ EM +G ++ TY + F ++DAV LF
Sbjct: 226 NVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLF 285
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ KP V ++L+ + + ++ ++ G + Y I AL
Sbjct: 286 NKMISENIKPDVYTFNILVDVFCK--SGKISYALKLVDEMHDRGQPPNIVTYSSILDALC 343
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K R D+A ++ +K+ G P+ TY+ +I GLC +G+ EDA N+ +++ G +
Sbjct: 344 KTHRVDKAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVV 403
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
T+ ++ G C D A +KM E DA
Sbjct: 404 TYIVMFYGFCKKGLFDEASALLSKMEENGCIPDA 437
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY NTIT+ +++ L + N +++ G++ + +Y
Sbjct: 152 GYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISY---------------- 195
Query: 321 VKLFEFMMDGPYKPSVQDCSL-LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++DG K +L LLR RV K + ++ DG
Sbjct: 196 ----GTLIDGLCKVGETRAALDLLR--------------RVDGKLVQPNVVMYSTIIDG- 236
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ K ++A + M + G P+ +TYS +I G G+ +DA ++ ++M
Sbjct: 237 ---MCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PD+ T+ IL+ C + ++ AL +M ++ + +++ RV+ A
Sbjct: 294 KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVA 353
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LL ++ ++ +RP T+ LI+ L + +LE+A N+ + + Y V YI F
Sbjct: 354 LLTKLKDQ-GIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGY---DITVVTYIVMF 409
Query: 560 ------GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
G ++AS L + P + Y + S F +G + A+ L +C
Sbjct: 410 YGFCKKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMAEKLHREC 463
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 91/220 (41%), Gaps = 5/220 (2%)
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D+A + + P I +++++ L K+ + + +ME G P++ IL
Sbjct: 69 DDAVSLFNCLLRQNPTPPAIEFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNIL 128
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C + A FAK+++ Y+ + LI G + +++ A +++ +
Sbjct: 129 INCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVA-LG 187
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDAS 566
+ Q ++ TLI+ L A++LLR + + P + + K V DA
Sbjct: 188 FQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHVNDAF 247
Query: 567 EFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + K P+ Y + FF G+ +A DL K
Sbjct: 248 DLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNK 287
>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
Length = 584
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/512 (22%), Positives = 205/512 (40%), Gaps = 56/512 (10%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K P+ Y+L++R L D + L M C+ +E ++ +I+
Sbjct: 97 KAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIV---------- 146
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL-K 240
GM K LG ++ G E + ++ S N V+ L
Sbjct: 147 ---------SGMCK---------------LGR-VEEARGFLAETVPVQASYNAVVHALCG 181
Query: 241 ELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
E R++ V F V E G + N +TY I+ + +R ++ M G
Sbjct: 182 EFRMWEV-----FSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 236
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
++ T+ + + F + + DA+ ++ +M+D + PS ++L+R + I + L F
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ K +L + + Y + + G D A + MK++G +P+ + Y+ +I L
Sbjct: 297 FNSMKRNAL--LPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVL 354
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK F+ A +++D+M + C P+ T+ LI C V RAL F M +
Sbjct: 355 CKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPND 414
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ L++G + A+ +++EM+ T+ T+I L + AM LL
Sbjct: 415 RTYNELLHGLFREGNHKDAFAMVIEMLNN-GFELSLVTYNTVINCLCQMCMRKHAMLLLG 473
Query: 539 LMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEG 594
M Q P F I + G V A+ L ++ P + AY + N+G
Sbjct: 474 RMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQG 533
Query: 595 RHYEAKDLLYK------CPHHIRQDSKISLLF 620
+ A L K CP+ + + +F
Sbjct: 534 KLSNAMVYLLKMLYEGICPNEATWNVLVRAIF 565
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 142/372 (38%), Gaps = 49/372 (13%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN +L L R V V + M+K G + ++ TY + R + ++ A K+ + M
Sbjct: 71 VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS-KSVYDGIHRALTKL 386
P ++ + + RV L ++ ++ Y+ + AL
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLG--------RVEEARGFLAETVPVQASYNAVVHALCGE 182
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R E ++ M G +P+ +TY+ ++ CKA AC +L M GC P++ T+
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 242
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T L++G +V AL + M+++ + +VLI G + GA M +
Sbjct: 243 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM-K 301
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP------------------- 547
+ L P T+ TL++ A L+ AM + MK P
Sbjct: 302 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361
Query: 548 -------------FPEPFVQYISKFGTVEDASEFLKALSV-------KEYPSSAAYLQVF 587
P V + + G + D +AL+V +P+ Y ++
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421
Query: 588 ESFFNEGRHYEA 599
F EG H +A
Sbjct: 422 HGLFREGNHKDA 433
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/231 (19%), Positives = 93/231 (40%), Gaps = 14/231 (6%)
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAG----FEPDNITYSQVIFGLCKAGRFEDACNVLD 432
D + A+ R A++ +K A +P Y+ ++ L + V D
Sbjct: 34 DALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYD 93
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M + G P++ T+ +LI+ C + VD A +M K D +++G
Sbjct: 94 NMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLG 153
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
RV A L E + P QA++ ++ L G R+ E +++ M ++ P +
Sbjct: 154 RVEEARGFLAETV------PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTY 207
Query: 553 VQYISKFGTVED----ASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ F + + + +S+ P+ + + + FF +G+ ++A
Sbjct: 208 TTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDA 258
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 6/249 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K N + Y ++ VL + +++++M + + T+ + + +
Sbjct: 338 SGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGR 397
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSI-SSINNPD-LGLVFRVANKYESLGNSLSKSVYD 377
A+ +F M P+ + + LL + N+ D +V + N G LS Y+
Sbjct: 398 ALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNN----GFELSLVTYN 453
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L ++ A ++ M G +PD T++ +I CK G+ A +L +M
Sbjct: 454 TVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAV 513
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C ++ +TILI C ++ A++ KM+ + + +VL+ + G
Sbjct: 514 NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGP 573
Query: 498 YKLLVEMIE 506
L ++E
Sbjct: 574 IHLFKYIVE 582
>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 180/405 (44%), Gaps = 40/405 (9%)
Query: 236 LTVLKELR---IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM 292
L V+K LR P+ AL FF+ + + +KH +T+ ++R LA V ++++M
Sbjct: 44 LDVVKRLRQESCVPL-ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM 102
Query: 293 KKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNP 352
K +G+ D +I + +++ + E AV++F + + PSV+ + +L ++ N
Sbjct: 103 KLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENR- 161
Query: 353 DLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS 412
+ +++ V + G + Y+ + +AL K + D A+K++ M N G PD ++Y+
Sbjct: 162 -IQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYT 220
Query: 413 QVI------------------------------FGLCKAGRFEDACNVLDEMEENGCIPD 442
VI GLCK ++ A ++ EM E G P+
Sbjct: 221 TVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPN 280
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +++ LI C + +++ A +M+++ + L L+ G + A L
Sbjct: 281 VISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWN 340
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+MI L+P + TL++ + +A+++ M++ P + I+ F
Sbjct: 341 QMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKR 400
Query: 560 GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G+++ A K L+ P+ Y + E+ + EA+ L+
Sbjct: 401 GSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLI 445
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 115/556 (20%), Positives = 209/556 (37%), Gaps = 144/556 (25%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
A FF + + F+ + + +M+R L + L++MK + E+ ++S++
Sbjct: 59 ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVI 118
Query: 172 GVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT---LVDVVLGSDWDDKIGKKLEDMKI 228
V ++ A A+ F+ +KE D K ++D +LG + I DMK
Sbjct: 119 SVYRQVGLAER--AVEMFYR--IKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK- 173
Query: 229 ELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNV 288
G++ N TYN +L+ L ++ V +
Sbjct: 174 ------------------------------RDGFEPNVFTYNVLLKALCKNNKVDGAKKL 203
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+ EM +G D +Y + + ++++ +L E ++P V
Sbjct: 204 LVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVV------------ 246
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
SVY+ + L K + A ++M+ M G P+
Sbjct: 247 -------------------------SVYNALINGLCKEHDYKGAFELMREMVEKGISPNV 281
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT----------------------- 445
I+YS +I LC +G+ E A + L +M + GC P+I T
Sbjct: 282 ISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQ 341
Query: 446 -------------WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+ L+QG C+ + +A+ F+ M E + LINGF +
Sbjct: 342 MIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRG 401
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
++GA + +M+ P + ++E L + +EA +L+ +M K+N P
Sbjct: 402 SLDGAVYIWNKMLTS-GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAP----- 455
Query: 553 VQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQ 612
+V + F+K L A L E F R E + ++CP +I
Sbjct: 456 --------SVPTFNAFIKGL------CDAGRLDWAEKVF---RQMEQQ---HRCPPNIVT 495
Query: 613 DSKISLLFGSAKSNKV 628
++ LL G AK+N++
Sbjct: 496 YNE--LLDGLAKANRI 509
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 100/471 (21%), Positives = 194/471 (41%), Gaps = 56/471 (11%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL------GVLK 175
+ F P+ Y+++L+ L + + L M C + +Y +++ G++K
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233
Query: 176 KAKKASD-----LAALNQFHDGMVKE--------IAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ ++ ++ ++ N +G+ KE + + V K + V+ + I
Sbjct: 234 EGRELAERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVI--SYSTLINVL 291
Query: 223 LEDMKIELSDNFVLTVLKE-----------------LRIYPVKALGFFRWVGEHSGYKHN 265
+IEL+ +F+ +LK LR AL + + G + N
Sbjct: 292 CNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPN 351
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+ YN +++ H ++ +V M++ G +I TY + F K ++ AV ++
Sbjct: 352 VVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWN 411
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS-------VYDG 378
M+ P+V + ++ ++ + F+ A ESL +SK ++
Sbjct: 412 KMLTSGCCPNVVVYTNMVEALCRHSK------FKEA---ESLIEIMSKENCAPSVPTFNA 462
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNI-TYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L GR D AEK+ + M+ P NI TY++++ GL KA R E+A + E+
Sbjct: 463 FIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMR 522
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G T+ L+ G C A AL KMM D ++++I + Q + A
Sbjct: 523 GVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERA 582
Query: 498 YKLL-VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++L + + + RP ++ +I L + E+ + LL M P
Sbjct: 583 AQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 95/227 (41%), Gaps = 36/227 (15%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI-------------- 305
SG N + Y ++ L RH ++ +++E M KE + T+
Sbjct: 416 SGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDW 475
Query: 306 --KISRQFQKFRMMEDAVKLFEFMMDGPYKPS-VQDCSLLLRSI---------------- 346
K+ RQ ++ + + ++DG K + +++ L R I
Sbjct: 476 AEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 347 -SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA--G 403
S N G+ ++ K G S + + I A K G+ + A +M+ +
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRK 595
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+ PD I+Y+ VI+GLC++ ED +L+ M G +P I TW++LI
Sbjct: 596 WRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642
>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
mitochondrial-like [Brachypodium distachyon]
Length = 966
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 19/326 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY ++ L + + V + + +EMK+ G D+ TY + F K ++E A
Sbjct: 447 GFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQA 506
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
F+ M P+V + LL + + + L + ++ + Y +
Sbjct: 507 RSWFDEMRSVGCSPNVVTYTALLHAY--LKSKQLIQAHDIFHRMVDAACYPNAVTYSALI 564
Query: 381 RALTKLGRFDEA----EKMMKAMKN------------AGFEPDNITYSQVIFGLCKAGRF 424
L K G +A EK++ N P+ +TY +I GLCKA +
Sbjct: 565 DGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKV 624
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
DA +LD M GC P+ + LI G C ++D A F +M + Y L
Sbjct: 625 SDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSL 684
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+ R++ A K+L EM+ P T+ +I+ L +E+A+NLL LM+++
Sbjct: 685 IDRMFKDGRLDLAMKVLSEMLND-SCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKG 743
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLK 570
P + I G A LK
Sbjct: 744 CSPNVVTYTALIDGLGKTGKADASLK 769
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 174/405 (42%), Gaps = 20/405 (4%)
Query: 212 GSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNG 271
G+D+D K + L + L+D+ V+ + P + FF W GY H Y+
Sbjct: 81 GADFDGKAERFLRRYREFLTDS-VVVAVLRAVRSPELCVRFFLWAERQVGYSHTGACYDA 139
Query: 272 ILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGP 331
+ +L + R ++ E+ ++ E+ + R+ + + ++A++ + D
Sbjct: 140 LAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEALEELGRLKDFG 199
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
Y+PS + L++ ++S ++G FRV + + G + +S +AL K+GR+ +
Sbjct: 200 YRPSAVTYNALVQVLASAGQVEMG--FRVQKEMSASGFCMDRSTIGYFAQALCKVGRWAD 257
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A M++ F D + +Q+I GL +A F +A + L M N CIP++ T+ L+
Sbjct: 258 ALNMLE---KEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLS 314
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G + MM + + + L + L++G+ + AYKL M
Sbjct: 315 GFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMT-TCGSP 373
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP----------FVQYISKFGT 561
P + I + G L A LL L++K F + + G
Sbjct: 374 PGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEMLAASCVLNKVNTANFSRCLCGVGK 432
Query: 562 VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
E A + LK + K + P ++ Y +V +F + + E LL++
Sbjct: 433 FEKAFQILKEMMRKGFVPDTSTYTKVI-TFLCQAKKVEKSFLLFQ 476
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 62/401 (15%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ +G + TY ++ + + + +EM+ G ++ TY + + K + +
Sbjct: 479 KRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQL 538
Query: 318 EDAVKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVF-- 358
A +F M+D P+ + C + + I + N + F
Sbjct: 539 IQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEG 598
Query: 359 ------------------------RVANKYESL------GNSLSKSVYDGIHRALTKLGR 388
+V++ +E L G ++ VYD + K+G+
Sbjct: 599 NDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGK 658
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
D A+++ M G+ P TY+ +I + K GR + A VL EM + C P++ T+T
Sbjct: 659 IDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTA 718
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
+I G E+++AL + M EK + LI+G + + + KL +M K
Sbjct: 719 MIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSK- 777
Query: 509 RLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEF 568
P T++ LI A L+EA LL MK ++P + + + F + +F
Sbjct: 778 GCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF-----SKKF 832
Query: 569 LKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDL 602
+ +L + E P + Y + +SF GR A +L
Sbjct: 833 IASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALEL 873
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 45/312 (14%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY ++ L + + V D +++ M G E + Y + F K +++A ++F
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M Y PSV + Y SL + + K
Sbjct: 667 LRMTKCGYLPSV-------------------------HTYTSLIDRMFKD---------- 691
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
GR D A K++ M N P+ +TY+ +I GL K G E A N+L MEE GC P++
Sbjct: 692 --GRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVV 749
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G + D +L F +M K + VLIN + ++ A+ LL EM
Sbjct: 750 TYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEM 809
Query: 505 IEKVRLRPWQATFKTLIEKLLG-ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFG 560
+ W + + G +++ ++ LL M+ P + I SK G
Sbjct: 810 ----KHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAG 865
Query: 561 TVEDASEFLKAL 572
+E A E K L
Sbjct: 866 RLETALELHKEL 877
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 147/389 (37%), Gaps = 58/389 (14%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L + + ++ M EG + + + + A KLF
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364
Query: 325 EFMMDGPYKPSVQDCSLLLRSISS----INNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
M P ++ + SI N L LV +V + + L+K
Sbjct: 365 NRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCVLNKVNTANFS 424
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L +G+F++A +++K M GF PD TY++VI LC+A + E + + EM+ G
Sbjct: 425 RCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVN 484
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C A +++A F +M + L++ +L K++ A+ +
Sbjct: 485 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDI 544
Query: 501 LVEMIEK--------------------------------------------------VRL 510
M++ +
Sbjct: 545 FHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTI 604
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASE 567
P T+ LI+ L A+++ +A LL M P + + K G +++A E
Sbjct: 605 APNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQE 664
Query: 568 -FLKALSVKEYPSSAAYLQVFESFFNEGR 595
FL+ PS Y + + F +GR
Sbjct: 665 VFLRMTKCGYLPSVHTYTSLIDRMFKDGR 693
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK-ISRQFQKFRMME 318
+G + N I Y+ ++ + + + V M K GY + TY I R F+ R ++
Sbjct: 637 AGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGR-LD 695
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+K+ M++ P+V + ++ +S + + L + + E G S + Y
Sbjct: 696 LAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKAL--NLLSLMEEKGCSPNVVTYTA 753
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K G+ D + K+ K M + G P+ +TY +I C AG ++A +LDEM+
Sbjct: 754 LIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHT- 812
Query: 439 CIPDIKTWTILIQG-HCAANEVDRALLCFAKMMEKNYDAD----ADLLDVLINGFLSQKR 493
W +QG HCA + + ++E+ + A + +LI+ F R
Sbjct: 813 ------HWPKHLQGYHCAVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGR 866
Query: 494 VNGAYKLLVEMIEKVRLRPWQAT--FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ A +L E++E +T + +LI+ L A ++EEA L M ++ P
Sbjct: 867 LETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIV 926
Query: 552 FVQYISKFGTVEDASEFLK 570
FV + V E L+
Sbjct: 927 FVSLVKGLIEVNKWDEALQ 945
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 92/219 (42%), Gaps = 10/219 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TY ++ L + + ++M +G + TY + ++
Sbjct: 740 EEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLL 799
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L + M + +Q ++ S LGL+ + ES VY
Sbjct: 800 DEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLL----EEMESHETVPIAPVYG 855
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT----YSQVIFGLCKAGRFEDACNVLDE 433
+ + +K GR + A ++ K + N+T Y+ +I LC A + E+A + E
Sbjct: 856 MLIDSFSKAGRLETALELHKELVEVS-SSLNMTSTGMYASLIQALCLASQVEEAFTLYTE 914
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRAL-LCFAKMME 471
M G +PD+ + L++G N+ D AL LC+ + E
Sbjct: 915 MTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHE 953
>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
Length = 607
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 126/293 (43%), Gaps = 7/293 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM--DIDTYIKISRQFQKFR 315
E G N IT N I+ L R V + E + E + TY + F
Sbjct: 267 EKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCN 326
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-LGLVFRVANKYESLGNSLSKS 374
+ A++LF M D Y P D + IS + L +A + G L +
Sbjct: 327 NVALAMELFHEMADQGYPP---DAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRK 383
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + + R EA ++ + MK AG +PD TY+ ++ LCKAG F +L M
Sbjct: 384 AYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNM 443
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
++GC P + T+ L+ G+C A + D AL F M E + + + LI+ + V
Sbjct: 444 IDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREV 503
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ A KL EM E + T+ L++ L E+A L+ MK++ P
Sbjct: 504 DVAIKLFDEMREN-NVPANVTTYNALLKGLQDKNMPEKAFELMDQMKEERCTP 555
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 125/307 (40%), Gaps = 46/307 (14%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P A F R + T+N +L L R ++R + M++ + DI TY
Sbjct: 111 PADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYG 170
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
+ + K ++ DA+K+ + M P C+ ++
Sbjct: 171 ILLNRLCKAGLVGDALKVLDRM----SSPGSDVCADIV---------------------- 204
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEA-----EKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ +V DG L K+GR +A E+M + G P+ +TY+ + C+
Sbjct: 205 -----ILNTVVDG----LCKIGRLQDAIVFVDERMRQVH---GCAPNTVTYNCLADACCR 252
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G + AC +++ ME+ G P++ T ++ G C V AL F + +A +
Sbjct: 253 VGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLEARGNA 312
Query: 481 L--DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ L++ FL V A +L EM ++ P + T+I L A RL +A N+
Sbjct: 313 VTYSTLVSAFLHCNNVALAMELFHEMADQ-GYPPDAVMYFTMISGLTQAGRLVDACNIAA 371
Query: 539 LMKKQNY 545
MKK +
Sbjct: 372 SMKKAGF 378
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 141/338 (41%), Gaps = 9/338 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN I+ L + ++ EM G D TY + + + +A
Sbjct: 183 GLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEA 242
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV-FRVANKYESLGNSLSKSVYDGI 379
++F M+ P + S L+ S + D LV FR K+ + +++ +Y +
Sbjct: 243 KEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV---IYTVL 299
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ G EA K+ M G D I Y+ ++ GLCK DA + DEM E G
Sbjct: 300 MHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGA 359
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD T+T LI GHC + +AL F M ++N D + LI+GF + A +
Sbjct: 360 LPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASE 419
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYI 556
L MI + ++ P T+ LI + EA L +M ++ P ++
Sbjct: 420 LWDGMISR-KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGY 478
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNE 593
+ G A EFL + K P +Y + F E
Sbjct: 479 CRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRE 516
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 155/346 (44%), Gaps = 11/346 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + N T N ++ L + D + + EM+ G D+ TY + + + ++E+
Sbjct: 112 SGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEE 171
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRVANKYESLGNSLSKSVYD 377
A ++ M D KPS+ + ++ + G++ + N +G S + Y+
Sbjct: 172 AFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLN----IGLSPDTTTYN 227
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + F EA+++ M G PD +++S +I + + A +M++
Sbjct: 228 TLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKF 287
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD +T+L+ G+C + AL +M+E+ D + ++NG +K + A
Sbjct: 288 GLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA 347
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
KL EM+E+ L P TF TLI + +A++L M ++N P + I
Sbjct: 348 DKLFDEMVERGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLID 406
Query: 558 KF---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEA 599
F G +E ASE + S K +P+ Y + ++ + G EA
Sbjct: 407 GFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 452
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/330 (22%), Positives = 148/330 (44%), Gaps = 18/330 (5%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL +FR + + G + + Y ++ R+ ++ + + +EM ++G +D+ Y I
Sbjct: 276 QALVYFRDM-KKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 334
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K +M+ DA KLF+ M++ P + L+ N K SL
Sbjct: 335 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGN---------MTKALSL 385
Query: 368 GNSLSKS-------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
++++ Y+ + K+G ++A ++ M + P++ITY +I C
Sbjct: 386 FGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCS 445
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G +A + D M E G P + T +I+G+C + + +A +M+ K D
Sbjct: 446 VGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHIS 505
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+ LINGF+ + ++ A+ L + +EK L P T+ ++ R++EA +LR M
Sbjct: 506 YNTLINGFVREDNMDKAF-LWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564
Query: 541 KKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
++ P + I+ T ++ +E +
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFR 594
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 104/216 (48%), Gaps = 2/216 (0%)
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M + + DI Y + F K ME A +L++ M+ P+ +L+ + S+ +
Sbjct: 389 MTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGH 448
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+ FR+ + G + + + + + G +A++ + M G PD+I+Y
Sbjct: 449 --VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I G + + A +++ME+ G +PDI T+ +++ G C + A L KM+E
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
K + D LING ++Q +N A++ EM+++
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 164/406 (40%), Gaps = 65/406 (16%)
Query: 87 EELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR--PSSTVYSLMLRNLVNKDS 144
+ + P L S + + + ++A +F D K+F P + +Y++++ +
Sbjct: 252 QGVVPDLVSFSSLIAVFSRNRHLDQALVYFR---DMKKFGLVPDNVIYTVLMHGYCRNGN 308
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ + M E C ++ Y +IL L K K +D ++ D MV+ A+ +
Sbjct: 309 MLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDA---DKLFDEMVERGALPDFY- 364
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
T ++ G D + KAL F + + + K
Sbjct: 365 TFTTLIHGHCQDGNM---------------------------TKALSLFGTMTQRN-IKP 396
Query: 265 NTITYNGILRVLAR---HESVRDFWNVVEEMK----KEGYEMDIDTYIKISRQFQKFRMM 317
+ + YN ++ + E + W+ + K Y + I+ Y + + FR
Sbjct: 397 DIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR-- 454
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV-- 375
L++ M++ KP++ C+ +++ + + E LG ++K V
Sbjct: 455 -----LWDVMIEKGIKPTLVTCNTVIKGYCRSGDS--------SKADEFLGRMIAKGVAP 501
Query: 376 ----YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y+ + + D+A + M+ G PD ITY+ V+ G C+ GR ++A VL
Sbjct: 502 DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVL 561
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
+M E G PD T+T LI GH + ++ A +M+++ + D
Sbjct: 562 RKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 87/194 (44%), Gaps = 1/194 (0%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S G +S + + + L K+ + A ++ + + +G E + T + ++ LCK G+F+
Sbjct: 76 SKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFD 135
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
D + L EME NG D+ T+ LI +C ++ A M +K + +I
Sbjct: 136 DVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAII 195
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + R A +L+EM+ + L P T+ TL+ + EA + M +Q
Sbjct: 196 NGLCKKGRYARAKGILIEML-NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGV 254
Query: 546 PPFPEPFVQYISKF 559
P F I+ F
Sbjct: 255 VPDLVSFSSLIAVF 268
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 138/605 (22%), Positives = 237/605 (39%), Gaps = 91/605 (15%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR-------------- 126
E ++L LSPKL VV +L+ N + FF W+ +K F+
Sbjct: 64 EHSSELCHLSPKLKPHHVVNILQTHKNT-DSVLRFFFWISRRKFFKHDMSCFVSMLNRLV 122
Query: 127 ------PSSTVYSLMLRNLVNKDSLKQFWVTLRRM--KEDHCY--IEEETYLSILGVLKK 176
P+ V LM+++ N+ +K+ L + K D Y T L LG
Sbjct: 123 RDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDM 182
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
A D+ + + G+ + N T+++++ K G+ +++ K+ +S F
Sbjct: 183 VDLARDMY-IKMLNSGIRPSLLTFN---TMINILC------KKGR-VQEAKLIMSHIFRY 231
Query: 237 TVLKELRIYPVKALG-------------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
Y LG F R V + G N++TY+ ++ L +
Sbjct: 232 DAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKD--GCDPNSVTYSTLINGLCSEGRLE 289
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ +++EEM ++G E + TY +AV+L M P++Q + L+
Sbjct: 290 EAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALI 349
Query: 344 RSISSINNPDL-----------GLV------------FRVANKYE----------SLGNS 370
+S ++ GLV V ++E S G+
Sbjct: 350 SGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSL 409
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
S Y+ I + +G +A + M AG P+ ITY+ +I+G CK G +A +
Sbjct: 410 PSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRL 469
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L+ M+ NG PD T+T LI G +++ A F MME + +I+G+ +
Sbjct: 470 LEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFN 529
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE 550
+V+ A L +M+E L P T+ +I + EA N M KQ P
Sbjct: 530 LAKVDDALALFWKMVESGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVI 588
Query: 551 PFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK--DLLY 604
+ +I G A + + + Y P+ Y + EGR +A+ +LL
Sbjct: 589 TYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLA 648
Query: 605 KCPHH 609
+ H+
Sbjct: 649 RLTHY 653
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 124/288 (43%), Gaps = 5/288 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + TY ++ +R + ++ M + G + TY I + ++D
Sbjct: 476 NGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDD 535
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+ LF M++ PS Q ++++ S N+ F K G + Y
Sbjct: 536 ALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENF--CGKMVKQGLLPNVITYTSF 593
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA--CNVLDEMEEN 437
L + GR A K+ M+ + P+ TYS +I+GLC+ GR EDA N+L +
Sbjct: 594 IDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P++ T+T L++G C A M +K ++ L+ G +V A
Sbjct: 654 GCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESA 713
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ M + + + + +K LI L +EEA + + M ++++
Sbjct: 714 LNIFYSM-DTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHW 760
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 1/256 (0%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL F W SG ++ TYN ++ ++ S+ + N +M K+G ++ TY
Sbjct: 536 ALALF-WKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFI 594
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ A K+F M Y P++ S L+ + + ++ + + G
Sbjct: 595 DGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYG 654
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y + + L GR EA++++ +M+ G +P Y ++ G CK + E A
Sbjct: 655 CEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESAL 714
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N+ M+ G + + LI C N ++ A F M+EK++++D VL++G
Sbjct: 715 NIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGL 774
Query: 489 LSQKRVNGAYKLLVEM 504
L + + KLL M
Sbjct: 775 LKEGETDLCLKLLHVM 790
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 124/305 (40%), Gaps = 20/305 (6%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD----FWNVVEEMKKEGYEMDIDTY 304
A F + EH G N +TY I+ V D FW +VE G TY
Sbjct: 501 ATSLFYGMMEH-GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVES----GNLPSSQTY 555
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ F K + +A M+ P+V + + + N GL F++ ++
Sbjct: 556 NVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLC--RNGRTGLAFKIFHEM 613
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAE--KMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
E + Y + L + GR ++AE ++ + + G EP+ TY+ ++ GLC G
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R +A ++ M++ G P + + L+ G C +V+ AL F M +
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRL 539
LI + + A + M+EK W + + L++ LL + + LL +
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLEK----HWNSDEVAWTVLLDGLLKEGETDLCLKLLHV 789
Query: 540 MKKQN 544
M+ +N
Sbjct: 790 MESRN 794
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 81/194 (41%), Gaps = 4/194 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRD--FWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
E Y N TY+ ++ L + D +N++ + G E ++DTY + +
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+A +L M +PS + LL I N + + ++LG L S
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALL--IGECKNLKVESALNIFYSMDTLGFQLHLSD 731
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + AL K +EA+ + + M + D + ++ ++ GL K G + +L ME
Sbjct: 732 YKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVME 791
Query: 436 ENGCIPDIKTWTIL 449
C + +T+ +L
Sbjct: 792 SRNCTLNFQTYVML 805
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 164/380 (43%), Gaps = 46/380 (12%)
Query: 230 LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
L+D VL ++ L+I ++ F+ G++ G+K + I+ N +L L + D V
Sbjct: 87 LADMLVLAFVRNLKI--LRGFEAFKRAGDY-GFKLSLISCNPLLSGLVKESENGDMEFVY 143
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
EM K E+++ ++ + K + A + E M P+V
Sbjct: 144 REMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVI------------ 191
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
Y +L + K + ++G+ +A+ ++K M G P+ +
Sbjct: 192 -------------TYNTLIDGYCK---------MGRIGKMYKADAILKEMVAKGICPNEV 229
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I G CK A V EM+ G P++ T+ ILI G C+ +VD A+ +M
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQM 289
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ + + + +VLINGF K VN A L +M EK + P T+ TLI+ R
Sbjct: 290 VSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDM-EKQGVDPNAMTYTTLIDAYCKDGR 348
Query: 530 LEEAMNLLRLMKKQNYPPFPEP-----FVQYISKFGTVEDASEFLKALSVKEYPSSAA-Y 583
+E+A L +M + FPE + + + G V+ A + + K+ + Y
Sbjct: 349 MEDAFALYNMMIDRGI--FPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ +S +G +A LL
Sbjct: 407 NILIDSLCKKGESRKAVKLL 426
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 38/261 (14%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ ++++V + N+ +M+K+G + + TY + + K MEDA L+
Sbjct: 297 NVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALY 356
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+D P V S Y+ + L
Sbjct: 357 NMMIDRGIFPEV-------------------------------------STYNCLIAGLC 379
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ G A +M M + D +TY+ +I LCK G A +LDEM E G P
Sbjct: 380 RKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHV 439
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ L+ G+C + AL+ +M K A+ +VLI GF + R+ A LL EM
Sbjct: 440 TYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEM 499
Query: 505 IEKVRLRPWQATFKTLIEKLL 525
+E+ L P + T++ + E+++
Sbjct: 500 LER-GLVPNRTTYEIIKEEMM 519
>gi|297789717|ref|XP_002862796.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
gi|297308523|gb|EFH39054.1| hypothetical protein ARALYDRAFT_359368 [Arabidopsis lyrata subsp.
lyrata]
Length = 378
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 139/301 (46%), Gaps = 5/301 (1%)
Query: 202 VAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
+ + +V+ W L + + FV+ VL+ L+ +A+ +FRW +
Sbjct: 49 IVNDICNVLETGAWGSSAENALSALFFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTE 107
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
H +YN +L V+AR + ++ EM G+ ++T I++ K + +
Sbjct: 108 LPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGF 167
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
+ + M ++P+ + L+ + S++N+ D+ L + + + LG + ++ + R
Sbjct: 168 DVVQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLA--LFQQMQELGYEPTVHLFTTLIR 225
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
K GR D A ++ MK++ + D + Y+ I K G+ + A E+E NG P
Sbjct: 226 GFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKP 285
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVNGAYKL 500
D T+T +I C AN +D A+ F + +EKN + +I G+ S + + AY L
Sbjct: 286 DEVTYTSMIGVLCKANRLDEAVEMF-EHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSL 344
Query: 501 L 501
L
Sbjct: 345 L 345
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 104/265 (39%), Gaps = 44/265 (16%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + + + FD ++++ M AGF P T +++ KA + + +V+ M
Sbjct: 115 YNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLSCVKANKLREGFDVVQNMR 174
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ P +T LI A N D L F +M E Y+ L LI GF + RV+
Sbjct: 175 KFKFRPAFSAYTTLIGAFSAVNHSDMMLALFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 234
Query: 496 GAYKLLVEM----------------------------------IEKVRLRPWQATFKTLI 521
A LL EM IE L+P + T+ ++I
Sbjct: 235 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 294
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE----- 576
L A RL+EA+ + ++K P + I +G+ A +F +A S+ E
Sbjct: 295 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGS---AGKFDEAYSLLERQRAK 351
Query: 577 --YPSSAAYLQVFESFFNEGRHYEA 599
PS AY + G+ EA
Sbjct: 352 GSIPSVIAYNCILTCLRKMGKVDEA 376
>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
Length = 797
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 119/499 (23%), Positives = 213/499 (42%), Gaps = 28/499 (5%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFW-VTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
K +R ++ V + +L+ L + L++ + ++RM E C + +Y ++L K+A
Sbjct: 122 KSGWRVNNIVINQLLKGLCDAKRLREAMDILIKRMPELGCTPDVVSYNTLLKGFCNEKRA 181
Query: 181 SD-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK----LEDMKIELSDNFV 235
+ L L+ D + + V + V+ G + ++ K LE M + N V
Sbjct: 182 EEALELLHMMADSQGRSCPPNVV--SYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVV 239
Query: 236 L--TVLKELRIYPV--KALGFFRWVGEHSGYKHNTITYN----GILRVLARHESVRDFWN 287
TV+ L V +A G F+ + + G K + TYN G L + E VR
Sbjct: 240 TYTTVIDGLCKAQVVDRAEGVFQQMID-KGVKPDNDTYNCLIHGYLSIGKWKEVVR---- 294
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
++EEM G + D TY + +A F+ M+ KP+V +L+ +
Sbjct: 295 MLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVAIYGILIHGYA 354
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ L + + N G S +++ I A K DEA + MK G PD
Sbjct: 355 T--KGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPD 412
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ + +I LCK GR +DA ++M G P+I + L+ G C ++ ++A +
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M+ + D + ++ ++ +V A + L++++E+V RP ++ TLI
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQR-LIDLMERVGTRPDVISYTTLIGGHCLV 531
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDA-SEFLKALSVKEYPSSAAY 583
R++EA L +M P + + + G ++DA F + L P Y
Sbjct: 532 GRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591
Query: 584 LQVFESFFNEGRHYEAKDL 602
+ F R EAK+L
Sbjct: 592 STILHGLFTTRRFSEAKEL 610
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 133/317 (41%), Gaps = 36/317 (11%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
+N I A+ + + ++ +MK++G D+ + + K ++DAV F MM
Sbjct: 381 FNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMM 440
Query: 329 DGPYKPSVQDCSLLLRSISSINN-----------------PDL-------------GLVF 358
+ P++ + L+ + +++ PD+ G V
Sbjct: 441 NEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500
Query: 359 ---RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ + E +G Y + +GR DEA K + M + G +PD TY+ ++
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G C+AGR +DA V EM NG P + T++ ++ G A + M+
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQ 620
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + ++++NG V+ A+KL + K + TF +I L + R E+AM+
Sbjct: 621 WNIWIYNIILNGLSKNNCVDEAFKLFQSLCSK-DFQLEITTFNIMIGALFKSGRNEDAMH 679
Query: 536 LLRLMKKQNYPPFPEPF 552
L + +Y P+ F
Sbjct: 680 LFATI--SSYGLVPDVF 694
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/300 (22%), Positives = 138/300 (46%), Gaps = 17/300 (5%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----PDLGLVFRVANKY---ESLG 368
++DA+KLF+ ++ S+ + LL ++S ++ + LV + N+ ++
Sbjct: 30 LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
+ Y + ++GR + + +G+ +NI +Q++ GLC A R +A
Sbjct: 90 VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149
Query: 429 NVL-DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME---KNYDADADLLDVL 484
++L M E GC PD+ ++ L++G C + AL M + ++ + +
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
INGF ++ +V+ AY L +EM+++ ++P T+ T+I+ L A+ ++ A + + M +
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMDR-GIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNEGRHYEAK 600
P + + I + ++ E ++ L P Y + N GR EA+
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 2/226 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN +L R + D + V EM + G + TY I R +A
Sbjct: 548 GLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEA 607
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L+ M+ + ++ +++L +S N D F++ S L + ++ +
Sbjct: 608 KELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEA--FKLFQSLCSKDFQLEITTFNIMI 665
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
AL K GR ++A + + + G PD TY + L + G E+ ++ ME++G
Sbjct: 666 GALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTT 725
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + L++ ++ RA +K+ EKN+ +A +LI+
Sbjct: 726 PNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLIS 771
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 167/403 (41%), Gaps = 72/403 (17%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TY ++ + + + +EM+ G ++ TY + + K + + A
Sbjct: 318 GVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQA 377
Query: 321 VKLFEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVANK 363
+F M+D P+ + C + + I + +N +G F K
Sbjct: 378 SDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDN--VGSDFYFEGK 435
Query: 364 YESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
+ +S++ +V Y + L K + +A++++ AM + G EP++I Y +I G CK
Sbjct: 436 HT---DSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKV 492
Query: 422 GRFEDA---------CN--------------------------VLDEMEENGCIPDIKTW 446
G+ ++A C VL +M E+ C P++ T+
Sbjct: 493 GKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTY 552
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T +I G C E +AL + M EK + LI+G +V+ + +L ++M
Sbjct: 553 TAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMST 612
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDAS 566
K P T++ LI A L+EA +LL MK+ +P + + + + F +
Sbjct: 613 K-GCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF-----SK 666
Query: 567 EFLKALSVKE-------YPSSAAYLQVFESFFNEGRHYEAKDL 602
+F+ +L + E P + Y + ++F GR EA +L
Sbjct: 667 KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALEL 709
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 142/355 (40%), Gaps = 58/355 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ +T TY+ ++ L V + + +EMK G D+ TY + F K ++E A
Sbjct: 283 GFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQA 342
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
F+ M S+G S + Y +
Sbjct: 343 RSWFDEM-------------------------------------RSIGCSANVVTYTALL 365
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM------ 434
A K + +A + M +AG P+ ITYS ++ GLCKAG + AC V ++
Sbjct: 366 HAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDN 425
Query: 435 ----------EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+ P++ T+ LI G C A++V A M+ + + + D L
Sbjct: 426 VGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDAL 485
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I+GF +++ A ++ + M K P T+ +LI+ + RRL+ AM +L M + +
Sbjct: 486 IDGFCKVGKIDNAQEVFLRM-SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESS 544
Query: 545 YPPFPEPFVQYISKFGTVEDASEFLKALSVKE----YPSSAAYLQVFESFFNEGR 595
P + I + + + LK LS+ E P+ Y + + G+
Sbjct: 545 CTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 125/273 (45%), Gaps = 5/273 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY +L + + + ++ M KEG + + + + R A KL
Sbjct: 141 NVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLL 200
Query: 325 EFMMDGPYKPSVQDCSLLLRSISS---INNPDL-GLVFRVANKYESLGNSLSKSVYDGIH 380
+ M D P ++ + SI + +PDL L +V + + L+K
Sbjct: 201 KRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFA 260
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L +G+FD A +++K M GF PD TYS+VI LC+A + E A + EM+ G
Sbjct: 261 RCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVN 320
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+TILI C A +++A F +M A+ L++ +L K++ A +
Sbjct: 321 PDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDI 380
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
MI+ P T+ L++ L A +++A
Sbjct: 381 FNRMID-AGCPPNTITYSALVDGLCKAGEIQKA 412
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 40/281 (14%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + N I Y+ ++ + + + V M K GY + TY + K R ++
Sbjct: 473 NGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDL 532
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+K+ M++ P+V Y +
Sbjct: 533 AMKVLSQMVESSCTPNV-------------------------------------VTYTAM 555
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L ++G +A K++ M+ G P+ +TY+ +I GL K+G+ + + + +M GC
Sbjct: 556 IDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGC 615
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ T+ +LI CAA +D A ++M + + ++ GF S+K + A
Sbjct: 616 APNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF-SKKFI--ASL 672
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L+E +E P + LI+ A RLEEA+ L + M
Sbjct: 673 GLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEM 713
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 126/291 (43%), Gaps = 25/291 (8%)
Query: 329 DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGR 388
D Y+PS + L++ +++ D+G FRV + G + K +AL K GR
Sbjct: 33 DFGYRPSGATYNALVQVLATAGQMDMG--FRVQKEMSESGFCMDKFTVGCFAQALCKEGR 90
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI 448
+ +A M++ F+ D + +Q+I GL +A F++A + L M N CIP++ T+
Sbjct: 91 WSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRT 147
Query: 449 LIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKV 508
L+ G ++ MM++ + + L + L++ + + + AYKLL M +
Sbjct: 148 LLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMAD-C 206
Query: 509 RLRPWQATFKTLIEKLLGARRL-------------EEAMNLLRLMKKQNYPPFPEPFVQY 555
P + I + G L EE + ++ K N F +
Sbjct: 207 GCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVN----TANFARC 262
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ G + A + +K + K + P ++ Y +V +F E E LL++
Sbjct: 263 LCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVI-TFLCEAMKVEKAFLLFQ 312
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 88/414 (21%), Positives = 154/414 (37%), Gaps = 84/414 (20%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + TYN +++VLA + + V +EM + G+ MD T ++ K DA
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEGRWSDA 94
Query: 321 VKLFEF------------MMDGPYKPSVQD--CSLL--LRSISSINN------------- 351
+ + E M+ G + S+ D S L +R S I N
Sbjct: 95 LVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLTGFLK 154
Query: 352 -PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
LG R+ N G + + S+++ + + + A K++K M + G P +
Sbjct: 155 KKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGCPPGYVA 214
Query: 411 YSQVIFG-----------------------------------------LCKAGRFEDACN 429
Y+ I LC G+F+ A
Sbjct: 215 YNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQ 274
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ M G +PD T++ +I C A +V++A L F +M + D +LI+ F
Sbjct: 275 IIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFC 334
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ A EM + T+ L+ L A++L +A ++ M PP
Sbjct: 335 KAGLIEQARSWFDEM-RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNT 393
Query: 550 ---EPFVQYISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
V + K G ++ A E + K + + V F+ EG+H ++
Sbjct: 394 ITYSALVDGLCKAGEIQKACEVYTKLIGTSD--------NVGSDFYFEGKHTDS 439
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 91/215 (42%), Gaps = 10/215 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G N +TY ++ L + V + +M +G + TY + ++
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L M + +Q +++ S LGL+ + ES G VY
Sbjct: 636 DEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGLL----EELESHGTVPIAPVYG 691
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT----YSQVIFGLCKAGRFEDACNVLDE 433
+ +K GR +EA ++ K M NIT Y+ +I LC A + E A + E
Sbjct: 692 LLIDNFSKAGRLEEALELHKEMMELS-SSLNITSKDMYTSLIQALCLASQLEKAFELYSE 750
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRAL-LCFA 467
+ G +P++ + LI+G N+ + AL LC++
Sbjct: 751 ITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYS 785
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 147/347 (42%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K +TYN +L+ L R+ V M G D+ ++ + F + +E+A
Sbjct: 224 GIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEA 283
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ ++ M P V S L+ + D + + G +Y +
Sbjct: 284 LRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEY--LREMREFGLMPDGVIYTMVI 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ G EA ++ M G PD +TY+ ++ GLCK R DA +L+EM+E G
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ T+T LI G+C +++AL F + ++ D + LI+G Q + A +L
Sbjct: 402 PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
+M + + P T+ LI+ +++ A L M + P + I +
Sbjct: 462 WDDMHSR-EIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYC 520
Query: 560 --GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
G V +FL K K P Y + + EG+ +EA +LL
Sbjct: 521 RSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLL 567
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 126/287 (43%), Gaps = 38/287 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN +L L + + D ++ EMK+ G D+ T+ + + + +E A
Sbjct: 364 GCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKA 423
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
++ F+ + D +P + + L+ DG+
Sbjct: 424 LQFFDTISDQRLRPDIVTYNTLI---------------------------------DGMC 450
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R G +A ++ M + P+++TYS +I C+ G+ ++A LDEM G +
Sbjct: 451 RQ----GDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIV 506
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ +I+G+C + V + KM D + LI+G++ + +++ A+ L
Sbjct: 507 PNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNL 566
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L +++E ++P T+ +I ++EA + + M + P
Sbjct: 567 L-KIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEP 612
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 109/288 (37%), Gaps = 73/288 (25%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNIT-----------------------------------YS 412
+F E + ++ M+ PD +T Y+
Sbjct: 174 QFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYN 233
Query: 413 QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEK 472
V+ GL + GR++ A V M+ G PD++++ +LI G C A E++ AL + +M +
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGR 293
Query: 473 NYDADADLLDVLINGFLSQKRVNGAYKLLVE-------------------------MIEK 507
D LI F + ++ A + L E M+E
Sbjct: 294 RVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEA 353
Query: 508 VRLR---------PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+R+R P T+ TL+ L RRL +A LL MK++ PP F I
Sbjct: 354 LRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHG 413
Query: 559 F---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ G +E A +F +S + P Y + + +G +A +L
Sbjct: 414 YCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 103/231 (44%), Gaps = 5/231 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM-KKEGYEMDIDTYIK 306
KAL FF + + + + +TYN ++ + R + + ++M +E + + I
Sbjct: 422 KALQFFDTISDQR-LRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSIL 480
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
I +K ++ ++A + M++ P++ + +++ N G F +++
Sbjct: 481 IDSHCEKGQV-DNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDK 539
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+ L Y+ + K G+ EA ++K M+N +PD +TY+ +I G G ++
Sbjct: 540 VMPDLI--TYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
A V +M G PD T+ +I GH A ++ +M++K D
Sbjct: 598 ADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 66/336 (19%), Positives = 116/336 (34%), Gaps = 70/336 (20%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKED-------------HCYIEE---ETYLSI 170
P Y+ +L L + L L MKE H Y + E L
Sbjct: 367 PDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQF 426
Query: 171 LGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL 230
+ + D+ N DGM ++ + + WDD +++
Sbjct: 427 FDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL---------WDDMHSREI------F 471
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNV 288
++ ++L + + F ++ E + G N +TYN I++ R +V
Sbjct: 472 PNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQF 531
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISS 348
+ +M+ + D+ TY + + K M +A L + M + +P ++++ S
Sbjct: 532 LPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFS- 590
Query: 349 INNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
+H G EA+ + K M G EPD
Sbjct: 591 ------------------------------VH------GNMQEADWVYKKMGARGIEPDR 614
Query: 409 ITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
TY +I G AG + + + DEM + G PD K
Sbjct: 615 YTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPDDK 650
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 168/399 (42%), Gaps = 56/399 (14%)
Query: 187 NQFH---DGMVKEIAMDNVAKTLVDVV--LGSDWDDKIGKKLEDMKIELSDNFVLTVLKE 241
+Q H DG VK++ KT++D++ GS +I +KLED ++ S V+ VL
Sbjct: 88 SQLHLRDDGFVKDV------KTILDIIHKPGSG-PYEIKQKLEDCNVKASSELVVEVLSR 140
Query: 242 LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDI 301
+R A FF W G+ GY H+ Y+ ++ VL + W +VEEM++ I
Sbjct: 141 VRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESI 200
Query: 302 DTYIKISRQFQKFRMMED---------AVKLFEFMMDGPYK-----------PSVQDCSL 341
T + +K+ + D A K F F + G Y+ +VQD
Sbjct: 201 VTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQV-GLYEFQGLLSALCRYKNVQDAEH 259
Query: 342 LL-----------RSISSINNPDLGLVFRVANKYESLGNSLSKS-------VYDGIHRAL 383
LL +S + I N L+ N E + +SK Y I
Sbjct: 260 LLFCNKNVFPLDTKSFNIILNGWCNLIVSARNA-ERIWEEMSKRRIQHDVVSYASIISCY 318
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+K + ++ + MK PD Y+ VIF L K ++A N++ +ME+N PD
Sbjct: 319 SKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDA 378
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ LI+ C A ++D A F M+E+ + F RV L++
Sbjct: 379 ITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTF----HAFFRILRVKEEVFELLD 434
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
++++ P T+ LI K R+L+E + M++
Sbjct: 435 KMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMRE 473
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 88/182 (48%), Gaps = 5/182 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
YN ++ LA++ V++ N++ +M+ D TY + + K R +++A ++F M
Sbjct: 345 VYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVM 404
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
++ PS++ R + VF + +K + LG + + Y + R +
Sbjct: 405 LERGISPSIRTFHAFFRILRVKEE-----VFELLDKMKELGCNPTIETYIMLIRKFCRWR 459
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
+ DE +++ AM+ G D +Y +I GL + E+A EM+E G +P+ KT +
Sbjct: 460 QLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTES 519
Query: 448 IL 449
+L
Sbjct: 520 ML 521
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 171/433 (39%), Gaps = 32/433 (7%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
E++ KLE+ + K + E VV VL ++ ND E A FF W + + S Y M+ L
Sbjct: 117 EIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLG 176
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA-ALNQFH--------- 190
W + M+ T ++L +++K D+ A+N F+
Sbjct: 177 KMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNFQV 236
Query: 191 -----DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY 245
G++ + + ++ + + K ++ + N +++ RI+
Sbjct: 237 GLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIW 296
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
+ +H+ ++Y I+ ++ + + E+MKK D Y
Sbjct: 297 EEMS---------KRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYN 347
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKY 364
+ K RM+++AV L M D P + L++ + D +F V
Sbjct: 348 AVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVM--- 404
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
L +S S+ H L +E +++ MK G P TY +I C+ +
Sbjct: 405 --LERGISPSI-RTFHAFFRILRVKEEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQL 461
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
++ + + M E+G D ++ +LI G +V+ A + +M EK + + + +
Sbjct: 462 DEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPK-TESM 520
Query: 485 INGFLSQKRVNGA 497
+ +LS ++V +
Sbjct: 521 LQAWLSGRQVTDS 533
>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/506 (23%), Positives = 219/506 (43%), Gaps = 31/506 (6%)
Query: 75 ACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSL 134
AC+ + +E K L+ K T S++Y K ++ +KA F+ + K F P ++Y +
Sbjct: 154 ACELIETMEEKNVRLNKK-TFCSLIYGFVK-ESRVDKALHLFDKM-KKSGFTPDISLYDV 210
Query: 135 MLRNL-VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGM 193
++ L VNKD +K+ MK + + ++ K ++ + + H+ M
Sbjct: 211 IIGGLCVNKD-VKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELT--CFFEEMHEDM 267
Query: 194 ---VKEIAMDNVAKTLVD-------------VVLGSD-WDDKIGK--KLEDMKIELSDNF 234
+ ++V +LVD + +G+ D +IGK + + M S F
Sbjct: 268 DPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTF 327
Query: 235 VLTVLKELRIYPVK-ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ + ++ + A+G FR + G K + + YN ++ L +++ +++EM+
Sbjct: 328 SIVINGLIKTGDLDLAVGLFRDMA-RIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEME 386
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
+ G E T I + + A+ L + M + P ++ + L++ +
Sbjct: 387 ESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEV 446
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
F V E + Y L K+ D+A K+ + + G+ PD I Y+
Sbjct: 447 EACKFLVDMAEEGFQPDIV--AYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNI 504
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I GLCK R +A N+L EMEE G +P T+ LI G C + ++ A+L + M+EK
Sbjct: 505 LIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKE 564
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ + LING + R + A L EM K P + I L R EA
Sbjct: 565 REPNVITYSTLINGLCNAGRPDDALVLWNEMGRK-GCTPSSIAYMAFIHGLSNCGRPNEA 623
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKF 559
+ LR M+++ P +V ++ F
Sbjct: 624 LVYLREMEEREMKPDTYVYVGLLNAF 649
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 84/163 (51%), Gaps = 3/163 (1%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A +K G+ D+A ++++ M+ + T+ +I+G K R + A ++ D+M+++G P
Sbjct: 144 AFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKKSGFTP 203
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DI + ++I G C +V +AL +++M D ++ LI+ F ++ + ++
Sbjct: 204 DISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSKEEELTCFFE-- 261
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
EM E + + + +++ L+ + +A +LL+ + N
Sbjct: 262 -EMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGN 303
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
+ FD+A + + + G+ D +S ++ K G+ + AC +++ MEE + KT
Sbjct: 114 MAEFDKALDVFNEIHDRGW-VDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKT 172
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI G + VD+AL F KM + + D L DV+I G K V A L EM
Sbjct: 173 FCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEM 231
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 152/360 (42%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + DT K+
Sbjct: 54 ASAVFAAILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E ++ Y S+ ++L D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFC--KEGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE K+ AM +G PD TYS +I GLCK + + A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ +N A+ L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLNQAHDLIDEMSMK-GLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + ++ LSV P + Y + +G + LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLL 410
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 96/244 (39%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G D+ TY + K M+ A
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+LF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G ++A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ D ++IN + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L Y + L + GR +AEKMM+ M + G +PD TY+ +I +CK G +
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKL 409
Query: 431 LDEMEENGCIPDIKTWTILIQG 452
L EM+ +G P + T+ +L+ G
Sbjct: 410 LKEMQXDGHAPSVVTYNVLMNG 431
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 203/475 (42%), Gaps = 39/475 (8%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
EKA + + P+ Y +ML L K+ RM ++ + TY
Sbjct: 245 EKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTY-- 302
Query: 170 ILGVLKKA-KKASDLAALNQFHDGMVKE-IAMD-NVAKTLVDVVLGSDWDDKIGKKLEDM 226
G+L ++ D+ + + + MVK + +D +V +L+ ++G+ E
Sbjct: 303 --GILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFC------EVGRTGEAW 354
Query: 227 KIELSDNFVLTVLKELRIYPVKALGFF------------RWVGEHSGYKHNTITYNGILR 274
K S F + ++++ Y + G + + + + +T+ ++
Sbjct: 355 KFWDSTGF--SGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIH 412
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + + ++E+ + G E+D+ +Y + +F K DA ++++ M+ KP
Sbjct: 413 GLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKP 472
Query: 335 SVQDCSLLLRS---ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDE 391
+ + L+ +S IN+ ++ + S G + Y+ + L K ++ E
Sbjct: 473 NSHVYNALINGFCRVSKIND-----AIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQE 527
Query: 392 AEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ 451
A + K M GF+PD TY+ +I GLC+ + + A + DE+ + G D+ ILI
Sbjct: 528 ASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIH 587
Query: 452 GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
G C+A +VD A + +M EKN + + L++GF ++ A L +++ L+
Sbjct: 588 GLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDN-GLK 646
Query: 512 PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVE 563
P T+ T I+ L R E + LL + P V+ + K+G ++
Sbjct: 647 PDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYGPIQ 701
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 158/388 (40%), Gaps = 24/388 (6%)
Query: 231 SDNFVLTVLKELR--IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD---- 284
S++ L VL + P AL FR + G ++N +L R D
Sbjct: 82 SESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAF 141
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
F ++ ++ TY I R ++ AV LF + P S L+
Sbjct: 142 FASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMS 201
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM-KNAG 403
++ + D L + ++ + G Y+ + + G F++A K+ + + ++ G
Sbjct: 202 GLAKHDQLDNAL--DLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P+ TY ++ GLCK GRF++A V M N D T+ ILI G C + +VD A
Sbjct: 260 ASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAA 319
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL----VEMIEKVRLRPWQATFKT 519
++ M++ D + + LI GF R A+K I ++ T+
Sbjct: 320 RVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQI------TTYNI 373
Query: 520 LIEKLLGARRLEEAMNLLR-LMKKQNYPPFPEPF---VQYISKFGTVEDASEFLK-ALSV 574
+ + LL + + EA LL+ L + P F + + + G A E L+ A +
Sbjct: 374 MTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNS 433
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDL 602
E +Y + F +GR ++A ++
Sbjct: 434 GEELDVFSYSSMINRFCKDGRTHDANEV 461
>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 623
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 9/301 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA GF + E G K +TYN +++ + + ++ EMK +G++ D+ TY I
Sbjct: 244 KAKGFL-GIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPI 302
Query: 308 -SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
S + R A ++ M P ++L+R S NN DL F ++
Sbjct: 303 LSWMCNEGR----ASEVLREMKGIGLVPDSVSYNILIRGCS--NNGDLETAFAYRDEMVK 356
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + Y+ + L + + AE +++ ++ G D++TY+ VI G C+ G +
Sbjct: 357 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKK 416
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + DEM +G P T+T LI C N+ A F K++ K D +++ L++
Sbjct: 417 AFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMD 476
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + ++ A+ LL EM +++ + P T+ L+ L G + EEA L+ MK++
Sbjct: 477 GHCATGNMDRAFSLLKEM-DRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIK 535
Query: 547 P 547
P
Sbjct: 536 P 536
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 117/259 (45%), Gaps = 7/259 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++ L + ++ E++++G +D TY + + + + A L + M
Sbjct: 365 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEM 424
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M KP+ + L+ + N L +V K + ++ DG H A
Sbjct: 425 MTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDG-HCAT-- 481
Query: 386 LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKT 445
G D A ++K M +PD++TY+ ++ GLC G+FE+A ++ EM+ G PD +
Sbjct: 482 -GNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHIS 540
Query: 446 WTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMI 505
+ LI G+ + A + +M+ ++ + L+ G + A +LL EM
Sbjct: 541 YNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREM- 599
Query: 506 EKVRLRPWQATFKTLIEKL 524
+ + P ++F ++IE +
Sbjct: 600 KSEGIVPNDSSFCSVIEAM 618
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 97/239 (40%), Gaps = 41/239 (17%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R + + RM+++A++ F M + + P + C+ +L +S +N + VF
Sbjct: 164 RFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVF---------- 213
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
Y ++R K + T++ +I LCK G+ + A
Sbjct: 214 -------YADMYRMEIKSNVY--------------------TFNIMINVLCKEGKLKKAK 246
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
L ME G P I T+ L+QG+ ++ A + ++M K + D + +++
Sbjct: 247 GFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWM 306
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ R A ++L EM + + L P ++ LI LE A M KQ P
Sbjct: 307 CNEGR---ASEVLREM-KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVP 361
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 117/521 (22%), Positives = 205/521 (39%), Gaps = 63/521 (12%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+ + P++ + + R L + LR M C + Y +++ L +
Sbjct: 173 RDRVPPTTFTFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVA 232
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI---GKKLEDMKIELSDNFVLTV 238
+ A L + ++ A D T DVVLG + + ++ M + V+T
Sbjct: 233 EAATL--LDEMLLMGCAAD--VNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTY 288
Query: 239 LKELRIYPVKALGFFRWVGEHSGYKH-------NTITYNGILRVLARHESVRDFWNVVEE 291
LR G R Y N + N ++R + + E
Sbjct: 289 GFLLR-------GLCRTRQADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEM 341
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M +G D+ TY + K AV++ + M + P++ S LL S
Sbjct: 342 MGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGM 401
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
D ++ + G S++ Y+GI AL K G+ DEA ++++ MK+ G +PD TY
Sbjct: 402 WDDARAM--LDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTY 459
Query: 412 SQVIFGLCK-----------------------------------AGRFEDACNVLDEMEE 436
+ +I+ LC +GR+++ + +EM
Sbjct: 460 NTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVL 519
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
+GC D+ ++ LI+ C VDR+++ +MM K + ++LIN +V
Sbjct: 520 HGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRD 579
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A +L EM+ + L P T+ TLI L A+NLL + +N P + I
Sbjct: 580 ALELSKEMLNQ-GLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 638
Query: 557 S---KFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNE 593
S K ++DAS L KA+S P+ + + ++F +
Sbjct: 639 SWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/353 (23%), Positives = 154/353 (43%), Gaps = 13/353 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TY +LR L R + + ++ + + M ++T I+ K + A
Sbjct: 280 GCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM-LNTVIRGCLAEGK---LARA 335
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L+E M P V ++L+ + + G R+ ++ E G + + Y +
Sbjct: 336 TELYEMMGSKGCPPDVHTYNILMHGLCKLGR--CGSAVRMLDEMEEKGCAPNIVTYSTLL 393
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + G +D+A M+ M GF ++ Y+ +I+ L K G+ ++A ++ EM+ GC
Sbjct: 394 HSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCK 453
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ +I C +++D A F ++E+ A+ + LI+ L R +L
Sbjct: 454 PDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRL 513
Query: 501 LVEMIEKVRLRPWQ-ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
EM+ + P ++ LI+ L ++ +M LL M + P + + +
Sbjct: 514 ANEMV--LHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINEL 571
Query: 557 SKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPH 608
K G V DA E K L+ P Y + G + A +LL K P+
Sbjct: 572 CKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPN 624
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 92/227 (40%), Gaps = 9/227 (3%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RAL +LGR +A +++ M G PD + Y VI L G +A +LDEM GC
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ T+ ++ G C V A +MM L+ G ++ + AY +
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L + +V + T+I L +L A L +M + PP + + +
Sbjct: 308 LGR-VPEVNV----VMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362
Query: 558 KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G A L + K P+ Y + SF G +A+ +L
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 104/233 (44%), Gaps = 9/233 (3%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + AL G EA ++ M G D T++ V+ GLC G +A ++D M
Sbjct: 217 LYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCGLGHVREAARLVDRM 276
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+GC P + T+ L++G C + D A ++ E N +L+ +I G L++ ++
Sbjct: 277 MMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVN----VVMLNTVIRGCLAEGKL 332
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A + L EM+ P T+ L+ L R A+ +L M+++ P +
Sbjct: 333 ARATE-LYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYST 391
Query: 555 YISKF---GTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +DA L +S K + +S Y + + +G+ EA L+
Sbjct: 392 LLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLV 444
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/314 (21%), Positives = 115/314 (36%), Gaps = 40/314 (12%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+YN +L LAR + D + M ++ T+ +R + DA+ L M
Sbjct: 147 SYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALALLRGM 206
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALT 384
V D L I ++ G V A + + G + + ++ + L
Sbjct: 207 A---RHGCVPDAVLYQTVIHALVAQ--GGVAEAATLLDEMLLMGCAADVNTFNDVVLGLC 261
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA----------------------- 421
LG EA +++ M G P +TY ++ GLC+
Sbjct: 262 GLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVMLNT 321
Query: 422 --------GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
G+ A + + M GC PD+ T+ IL+ G C A+ +M EK
Sbjct: 322 VIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEMEEKG 381
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ L++ F + A +L +M K Q + +I L +L+EA
Sbjct: 382 CAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG-YNGIIYALGKDGKLDEA 440
Query: 534 MNLLRLMKKQNYPP 547
M L++ MK Q P
Sbjct: 441 MRLVQEMKSQGCKP 454
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 163/356 (45%), Gaps = 12/356 (3%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+K + F + E G++ N Y+ +L LA+ + + M+ +G+ + + Y
Sbjct: 141 LKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRT 200
Query: 307 ISRQFQKFRMMEDAVKLF--EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
I K E A ++F + + G S SLLL +N D VF V +K
Sbjct: 201 IVNALCKNGYTE-AAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKE 259
Query: 365 ESLG-NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ NS+S S+ IH L ++GR +EA + M G +P TY+ +I LC G
Sbjct: 260 VTCAPNSVSYSIL--IH-GLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A N+ DEM GC P++ T+T+LI G C +++ A KM++ +
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LING+ RV A++LL M EK +P TF L+E L + +A++LL+ M
Sbjct: 377 LINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDN 435
Query: 544 NYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
P + + + + G + A + L +++ + P + + +F +G+
Sbjct: 436 GLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGK 491
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 162/393 (41%), Gaps = 58/393 (14%)
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
FF WV +HS Y + N +L+++ R V+ + KE + + +K+ F
Sbjct: 89 FFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKE-MLKLMYCF 147
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNS 370
+ R ++F F ++ P S LL S++ + DLG L + + E+ G
Sbjct: 148 DELR------EVFGFRLNYPCYSS------LLMSLAKL---DLGFLAYVTYRRMEADGFV 192
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF-------------------------- 404
+ Y I AL K G + AE M + GF
Sbjct: 193 VGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKV 252
Query: 405 ----------EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
P++++YS +I GLC+ GR E+A + D+M E GC P +T+T+LI+ C
Sbjct: 253 FDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALC 312
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+D+A F +M+ + + VLI+G ++ A + +M+ K R+ P
Sbjct: 313 DRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMV-KDRIFPSV 371
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLK- 570
T+ LI R+ A LL +M+K+ P F ++ + + G A LK
Sbjct: 372 ITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKR 431
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
L P +Y + + EG A LL
Sbjct: 432 MLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLL 464
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 153/365 (41%), Gaps = 27/365 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N TY ++ L R + + V +M K+ + TY + + K + A
Sbjct: 331 GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPA 390
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES-LGNSLSKSV--YD 377
+L M KP+V+ + L+ + + P ++ + + L N LS + Y+
Sbjct: 391 FELLTVMEKRACKPNVRTFNELMEGLCRVGKP-----YKAVHLLKRMLDNGLSPDIVSYN 445
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L + G + A K++ +M EPD +T++ +I CK G+ + A L M
Sbjct: 446 VLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRK 505
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G D T T LI G C + AL +++ L+V+++ +V
Sbjct: 506 GISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEE 565
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L + I K+ L P T+ TL++ L+ + + + +L LMK P P+ +
Sbjct: 566 LAMLGK-INKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIIN 624
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG--------------RHYEA 599
+ +FG VE+A + L A+ P+ Y + + + N G R YE
Sbjct: 625 GLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYEL 684
Query: 600 KDLLY 604
D +Y
Sbjct: 685 NDRIY 689
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/484 (20%), Positives = 194/484 (40%), Gaps = 58/484 (11%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
FR + YS +L +L D +VT RRM+ D + Y +I+ L K
Sbjct: 156 FRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCK-------- 207
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
N + + E+ M + K +G D IG L +L + L +
Sbjct: 208 --NGYTEA--AEMFMSKILK------IGFVLDSHIGTSL-----------LLGFCRGLNL 246
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
AL F + + N+++Y+ ++ L + + + + ++M ++G + TY
Sbjct: 247 R--DALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ + +++ A LF+ M+ KP+V ++L+ + K
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR------------DGKI 352
Query: 365 ESLGNSLSKSV----------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
E K V Y+ + K GR A +++ M+ +P+ T++++
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ GLC+ G+ A ++L M +NG PDI ++ +LI G C ++ A + M +
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+ D +IN F Q + + A L M+ K + + T TLI+ + + +A+
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRK-GISLDEVTGTTLIDGVCKVGKTRDAL 531
Query: 535 NLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALS-VKEYPSSAAYLQVFESF 590
+L + K P + +SK V++ L ++ + PS Y + +
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591
Query: 591 FNEG 594
G
Sbjct: 592 IRSG 595
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 76/137 (55%), Gaps = 1/137 (0%)
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K LG S Y + L + G + ++++ MK +G P+ Y+ +I GLC+
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
GR E+A +L M+++G P+ T+T++++G+ ++DRAL M+E+ Y+ + +
Sbjct: 630 GRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIY 689
Query: 482 DVLINGF-LSQKRVNGA 497
L+ GF LSQK ++ +
Sbjct: 690 SSLLQGFVLSQKGIDNS 706
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 88/427 (20%), Positives = 165/427 (38%), Gaps = 56/427 (13%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+S YS+++ L L++ + +M E C TY ++ L + A
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKAL--CDRGLIDKAF 321
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL------- 239
N F D M+ NV T ++ G D KI + + + D +V+
Sbjct: 322 NLF-DEMIPRGCKPNV-HTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALIN 379
Query: 240 ---KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
K+ R+ P L V E K N T+N ++ L R ++++ M G
Sbjct: 380 GYCKDGRVVPAFEL---LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--- 353
DI +Y + + M A KL M +P + ++ + D
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 354 --LGLVFRVANKYESLGNSLSKSVYDGIHRA----------------------------- 382
LGL+ R K SL ++ DG+ +
Sbjct: 497 AFLGLMLR---KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVIL 553
Query: 383 --LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+K + E M+ + G P +TY+ ++ GL ++G + +L+ M+ +GC+
Sbjct: 554 DMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCL 613
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ +TI+I G C V+ A + M + + V++ G+++ +++ A +
Sbjct: 614 PNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALET 673
Query: 501 LVEMIEK 507
+ M+E+
Sbjct: 674 VRAMVER 680
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 121/295 (41%), Gaps = 29/295 (9%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PSV + L+ + I + D+ FR+ + G + Y I L + GR +EAE
Sbjct: 579 PSVVTYTTLVDGL--IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
K++ AM+++G P+++TY+ ++ G G+ + A + M E G + + ++ L+QG
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 454 C-----------------AANEVDRALLC-FAKMMEKNYDADADLLDVLINGFLSQKRVN 495
A E D + ++E+ + L L+ + R +
Sbjct: 697 VLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTD 756
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF--- 552
+ L+ ++E+ + ++E ++ + M L+ L+ K + P + F
Sbjct: 757 ESNDLVQNVLERGVF--LEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLV 814
Query: 553 VQYISKFGTVEDASEFLKAL----SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+Q + K G E A E + L V E Y++ G E DL+
Sbjct: 815 IQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLV 869
>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
thaliana]
gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 144/308 (46%), Gaps = 8/308 (2%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLRSISSINNPDLGLVFR-- 359
++I + R + K + + AV LF M+D K SV+ + +L I + GL F
Sbjct: 114 SFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDY 173
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
V N ++ S + ++ + +AL KL D A ++ + M PD TY ++ GLC
Sbjct: 174 VVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLC 233
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K R ++A +LDEM+ GC P + +LI G C ++ R M K +
Sbjct: 234 KEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEV 293
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ LI+G + +++ A LL M+ + P T+ TLI L+ RR +A+ LL
Sbjct: 294 TYNTLIHGLCLKGKLDKAVSLLERMVSS-KCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 540 MKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGR 595
M+++ Y + IS K G E+A + ++ K P+ Y + + EG+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 596 HYEAKDLL 603
EAK++L
Sbjct: 413 PNEAKEIL 420
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 104/228 (45%), Gaps = 5/228 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K R DEA ++ M++ G P + Y+ +I GLCK G ++D M
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
GC+P+ T+ LI G C ++D+A+ +M+ + LING + Q+R
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPF 552
A +LL M E+ Q + LI L + EEAM+L R M ++ P
Sbjct: 345 DAVRLLSSMEER-GYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVL 403
Query: 553 VQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
V + + G +A E L + ++ P++ Y + + FF G EA
Sbjct: 404 VDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEA 451
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 109/484 (22%), Positives = 206/484 (42%), Gaps = 64/484 (13%)
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAK---KA 180
F+ + S M+ + N L R++ ++ I E +++ + KA KA
Sbjct: 72 SFKLGDSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKA 131
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKT---LVDVVL-------GSDWDDKIGKKLEDMKIE- 229
DL FH MV E K+ +++V++ G ++ D + +M I
Sbjct: 132 VDL-----FHR-MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISP 185
Query: 230 --LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWN 287
LS N V+ L +LR + +A+ FR + E + TY ++ L + E + +
Sbjct: 186 NGLSFNLVIKALCKLR-FVDRAIEVFRGMPERKCLP-DGYTYCTLMDGLCKEERIDEAVL 243
Query: 288 VVEEMKKEG-------YEMDIDTYIKISRQFQKFRMMEDA-------------VKLFEFM 327
+++EM+ EG Y + ID K + +++++ +
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPD--------LGLV--------FRVANKYESLGNSL 371
+ G +V SLL R +SS P+ GLV R+ + E G L
Sbjct: 304 LKGKLDKAV---SLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHL 360
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++ +Y + L K G+ +EA + + M G +P+ + YS ++ GLC+ G+ +A +L
Sbjct: 361 NQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEIL 420
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+ M +GC+P+ T++ L++G + A+ + +M + + VLI+G
Sbjct: 421 NRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGV 480
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
RV A + +M+ + ++P + ++I+ L G ++ A+ L M Q P
Sbjct: 481 GRVKEAMMVWSKML-TIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPD 539
Query: 552 FVQY 555
V Y
Sbjct: 540 VVTY 543
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/421 (20%), Positives = 180/421 (42%), Gaps = 35/421 (8%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
PS +Y++++ L K L + + M C E TY +++ G+ K K ++
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 186 LNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD---KIGKKLEDMKIELSDNFVLTVLKEL 242
L + K I D TL++ ++ ++ +E+ L+ + ++ L
Sbjct: 315 LERMVSS--KCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGL 372
Query: 243 --RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
+A+ +R + E G K N + Y+ ++ L R + ++ M G +
Sbjct: 373 FKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC-SLLLRSISSINNPDLGLVFR 359
TY + + F K + E+AV++++ MD + C S+L+ + + ++
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWK-EMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMM-- 488
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM---MKAMKNAGFEPDNITYSQVIF 416
V +K ++G Y I + L +G D A K+ M + +PD +TY+ ++
Sbjct: 489 VWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLD 548
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLC A ++L+ M + GC PD+ T + + EK+
Sbjct: 549 GLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN----------------TLSEKSNSC 592
Query: 477 DA--DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D L+ L+ L ++RV+GA ++ M+ K L P +T+ ++ ++ +++ A+
Sbjct: 593 DKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKY-LAPKTSTWAMIVREICKPKKINAAI 651
Query: 535 N 535
+
Sbjct: 652 D 652
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 118/256 (46%), Gaps = 3/256 (1%)
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
++ +EM G DI T + + +E A+++F+ C++++ +
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
N D + + N G Y+ + K G F AE + M G P
Sbjct: 312 CKGNKVDEA--WDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIP 369
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+TY+ ++ G CK R E+A ++D M GC PD+ T++ LI+G+C A VD L F
Sbjct: 370 STVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELF 429
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
++M ++ AD + LI+GF +NGA + EM+ + P TF++++ L
Sbjct: 430 SEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSS-GVCPDTITFRSMLAGLCT 488
Query: 527 ARRLEEAMNLLRLMKK 542
L++ + +L ++K
Sbjct: 489 KAELQKGLTMLEDLQK 504
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 5/194 (2%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L LV R+ + G+ Y I + KLG A M++ M + + + + YS
Sbjct: 30 LALVDRMVEE----GHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQIKANVVIYSA 85
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ LCK G A N+ EM E G P++ T+ +I G+C+ + A M+E+N
Sbjct: 86 IVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERN 145
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
D D LIN F+ + +V+GA +L EM+ + + P T+ ++I+ RLE+A
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYREMLRR-NIFPTTITYSSMIDGFCKHSRLEDA 204
Query: 534 MNLLRLMKKQNYPP 547
++ LM + P
Sbjct: 205 KHMFDLMVSKGCSP 218
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 144/380 (37%), Gaps = 62/380 (16%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G N +T+ ++ L R V +V+ M +EG++ D TY I K
Sbjct: 4 TGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVS 63
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVAN 362
A+ + M + K +V S ++ + N P++ + +
Sbjct: 64 ALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMID 123
Query: 363 KYESLG--NSLSKSVYDGIHR--------------ALTKLGRFDEAEKMMKAMKNAGFEP 406
Y S G + + + D I R A K G+ AE++ + M P
Sbjct: 124 GYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFP 183
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
ITYS +I G CK R EDA ++ D M GC PDI T LI G C A
Sbjct: 184 TTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRA---------- 233
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
K + LI+GF VN A L EMI + P T TL+ L
Sbjct: 234 -----KRH---------LIHGFCQVGNVNVAQDLFQEMISN-GVSPDIVTCNTLLAGLCE 278
Query: 527 ARRLEEAMNLLRLMKKQNY---PPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSS-AA 582
+LE+A+ + ++ +K + + K V++A + +L V +
Sbjct: 279 NGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVT 338
Query: 583 YLQVFESFFNEGRHYEAKDL 602
Y + F EG A+D+
Sbjct: 339 YNILIGVFVKEGNFLRAEDI 358
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 107/531 (20%), Positives = 204/531 (38%), Gaps = 73/531 (13%)
Query: 127 PSSTV-YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLA 184
P++ V ++ ++ L + + Q + RM E+ + TY +I+ G+ K S L
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L + + +K +VV+ S D++ K +K + + T + E I
Sbjct: 67 MLRKMDESQIK-----------ANVVIYSAIVDRLCKDGNHIKAQ----NIFTEMHEKGI 111
Query: 245 YPVKALGFFRWVGEHSGYKH------------------NTITYNGILRVLARHESVRDFW 286
+P L + + + Y + +T++ ++ + V
Sbjct: 112 FP-NVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAE 170
Query: 287 NVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI 346
+ EM + TY + F K +EDA +F+ M+ P I
Sbjct: 171 ELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPD----------I 220
Query: 347 SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
++N +L + ++ IH ++G + A+ + + M + G P
Sbjct: 221 ITLN---------------TLIDGCCRAKRHLIH-GFCQVGNVNVAQDLFQEMISNGVSP 264
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
D +T + ++ GLC+ G+ E A + +++ D T I+I G C N+VD A F
Sbjct: 265 DIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLF 324
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
+ + D ++LI F+ + A + +EM+ K + P T+ ++++
Sbjct: 325 NSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCK-GIIPSTVTYNSMVDGFCK 383
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKE-YPSSAA 582
RLEEA ++ M + P F I K G V+D E + + +
Sbjct: 384 QNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTIT 443
Query: 583 YLQVFESFFNEGRHYEAKDLLYK------CPHHIRQDSKISLLFGSAKSNK 627
Y + F G A+D+ + CP I S ++ L A+ K
Sbjct: 444 YNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQK 494
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 38/261 (14%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KAL F+ V + S +T T N I+ + + V + W++ + G E D+ TY +
Sbjct: 284 KALEMFK-VFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K A ++ M+ C ++ S + N
Sbjct: 343 IGVFVKEGNFLRAEDIYLEML----------CKGIIPSTVTYN----------------- 375
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
S+ DG K R +EA +M+ +M + G PD +T+S +I G CKAGR +D
Sbjct: 376 ------SMVDG----FCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDG 425
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ EM + G + D T+ LI G C +++ A F +M+ D ++ G
Sbjct: 426 LELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAG 485
Query: 488 FLSQKRVNGAYKLLVEMIEKV 508
++ + +L ++ + V
Sbjct: 486 LCTKAELQKGLTMLEDLQKSV 506
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 5/208 (2%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G + +T++ ++ GLC+ GR A ++D M E G PD T+ ++ G C +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
AL KM E A+ + +++ A + EM EK + P T+
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEK-GIFPNVLTYN 119
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVK 575
+I+ + +A LLR M ++N P F I+ F G V A E + + +
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179
Query: 576 E-YPSSAAYLQVFESFFNEGRHYEAKDL 602
+P++ Y + + F R +AK +
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHM 207
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 142/324 (43%), Gaps = 20/324 (6%)
Query: 258 EHSGYKHNTITYNGIL-------RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
E G N IT N I+ RV A E R+ V E + TY ++
Sbjct: 267 EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAV-----TYSTLASA 321
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGN 369
F ++ A++LF M D ++P D + IS + L A + G
Sbjct: 322 FLHCNNVDMAMELFHEMADHGHRP---DAVMYFTMISGLTQAGRLLDACTTAASMKKAGF 378
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
L Y+ + + + EA ++++ MK G +PD TY+ ++ GLCKAG F
Sbjct: 379 KLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDE 438
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+L M ++GC P + T+ L+ G+C A + D AL F M E + + + LI+
Sbjct: 439 LLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLC 498
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP-- 547
+ V+ A KL EM EK + T+ L++ L + E+A L+ M+++ P
Sbjct: 499 KSREVDVAIKLFDEMREK-NVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNY 557
Query: 548 -FPEPFVQYISKFGTVEDASEFLK 570
+ ++++ + G E F++
Sbjct: 558 VTVDVLMEWLPEIGETERLKCFMQ 581
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 101/237 (42%), Gaps = 13/237 (5%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
S+++ + AL + G ++ +M++A +PD +TY ++ GLCK+G DA VLD
Sbjct: 132 SIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDR 191
Query: 434 MEENG--CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA--DADLLDVLINGFL 489
M G PDI ++ G C + +A++ + M + +A + L + F
Sbjct: 192 MSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFC 251
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
+ A K++ M EK + P T T+I L R+ A+ R K+ +P
Sbjct: 252 RVGDIGMACKIVARM-EKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR-EKRTVWPEAR 309
Query: 550 EPFVQY---ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
V Y S F V+ A E ++ + P + Y + GR +A
Sbjct: 310 GNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDA 366
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 68/171 (39%), Gaps = 6/171 (3%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD ++ ++ L +AG + M + PD+ T+ IL+ G C + V AL
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188
Query: 466 FAKMMEKNYDA--DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR-LRPWQATFKTLIE 522
+M D D +L+ +++G R+ A + E + V P T+ L +
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248
Query: 523 KLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
+ A ++ M+K+ P + + + G V A EF +
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFR 299
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 50/248 (20%), Positives = 101/248 (40%), Gaps = 6/248 (2%)
Query: 107 NDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEET 166
N+ + A F+ + D RP + +Y M+ L L T MK+ ++ +
Sbjct: 326 NNVDMAMELFHEMADHGH-RPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKA 384
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDW---DDKIGKKL 223
Y ++G + KK + L + G+ + + L + D+ D+ +G +
Sbjct: 385 YNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMI 444
Query: 224 EDMKIELSDNFVLTVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+D F V + +AL FR + E + + NT+ YN ++ L + V
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDE-ARIQPNTVIYNTLIDFLCKSREV 503
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+ +EM+++ ++ TY + + Q +M E A +L + M + P+ +L
Sbjct: 504 DVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVL 563
Query: 343 LRSISSIN 350
+ + I
Sbjct: 564 MEWLPEIG 571
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 155/360 (43%), Gaps = 8/360 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + DT K+
Sbjct: 54 ASAVFAAILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKV 113
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + +E +++ Y S+ ++L+ + D+ + V +
Sbjct: 114 LEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFC--KDGDIRVAQSVFDAITKW 171
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S Y+ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDA 231
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 232 NKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYG 291
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A L+ EM K L+P + T+ TLI+ L+ A + M ++N
Sbjct: 292 LCKKGDLKQANDLIDEMSMK-GLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRL 350
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ IS G DA + L+ LSV P + Y + F +G ++ LL
Sbjct: 351 DDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLL 410
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 99/244 (40%), Gaps = 2/244 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + ++YN ++ R + + + + M G + D+ TY + K M+DA
Sbjct: 172 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDA 231
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ M+ P+ + L+ DL + +SL L Y+ +
Sbjct: 232 NKLFDEMLVKALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI--TYNTLI 289
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G +A ++ M G +PD ITY+ +I G CK G + A M +
Sbjct: 290 YGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIR 349
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D +T LI G C A +M+ DA ++IN F + V KL
Sbjct: 350 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKL 409
Query: 501 LVEM 504
L EM
Sbjct: 410 LKEM 413
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 74/348 (21%), Positives = 129/348 (37%), Gaps = 72/348 (20%)
Query: 106 DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEE 165
D D A + F+ + K RPS Y+ ++ + L + + M +
Sbjct: 155 DGDIRVAQSVFDAI-TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVY 213
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSDWDDKIGKKLE 224
TY ++ L K K D L F + +VK + + V TL+D G + ++ +E
Sbjct: 214 TYSVLINGLCKENKMDDANKL--FDEMLVKALVPNGVTFTTLID---GHCKNGRVDLAME 268
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
K LS + + + ITYN ++ L + ++
Sbjct: 269 IYKQMLSQSLL----------------------------PDLITYNTLIYGLCKKGDLKQ 300
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
++++EM +G + D TY ++DG K
Sbjct: 301 ANDLIDEMSMKGLQPDKITYTT--------------------LIDGCCKEG--------- 331
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
DL F + L Y + L + GR +AEKM++ M + G
Sbjct: 332 --------DLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGL 383
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+PD TY+ +I CK G +L EM+ +G +P + T+ +L+ G
Sbjct: 384 KPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Brachypodium distachyon]
Length = 801
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 179/437 (40%), Gaps = 52/437 (11%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
RP++ VY+ + + LV++ + RM C TY+ ++ L K A D A
Sbjct: 176 RPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVD--A 233
Query: 186 LNQFHDGMVKEIAMD-NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
L F + + + I D + L+ + + G+ L MK
Sbjct: 234 LKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMK----------------- 276
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
+G + +TY L L + V + ++ E ++ G+ + + Y
Sbjct: 277 --------------ENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGY 322
Query: 305 -IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
I FQ R ++ + + M+ P + ++L+R + F + ++
Sbjct: 323 SCLIDGLFQAGRF-DEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDA--FLLLDE 379
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G Y+ + +AL +G D A+ +M M D+ T++ +I GLCK G
Sbjct: 380 MKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGL 439
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM-------------M 470
+ A V DEM E+GC P + T+ LI G A ++ A + F KM +
Sbjct: 440 IDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTL 499
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
N D + L L++G +V AYKLL +IE + P T+ TLI L A+ L
Sbjct: 500 GANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIES-GVVPDVVTYNTLINGLCKAKNL 558
Query: 531 EEAMNLLRLMKKQNYPP 547
+ A+ L + ++ + P
Sbjct: 559 DGALRLFKELQLKGISP 575
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 141/347 (40%), Gaps = 42/347 (12%)
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
+ YN + +VL + + M G + TYI + K M DA+K
Sbjct: 176 RPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALK 235
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+F+ M++ P V+ ++LL S
Sbjct: 236 MFDEMLERGIVPDVKIYTVLLSS------------------------------------- 258
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L GR ++A +++ +MK G PD +TY+ + GLCKAGR ++A + + +++ G
Sbjct: 259 LCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLG 318
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ ++ LI G A D L + +M+ K+ D L +LI F R A+ LL
Sbjct: 319 LIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLD 378
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY---PPFPEPFVQYISKF 559
EM +K P + TL++ L ++ A +L+ M + N + + K
Sbjct: 379 EMKDK-GFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKK 437
Query: 560 GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G ++ A + + +P+ Y + + + G EA+ L +K
Sbjct: 438 GLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHK 484
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 103/230 (44%), Gaps = 3/230 (1%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++AV+ F M D +P+ + + + + ++ + L + N+ S G + + Y
Sbjct: 161 QEAVEAFSRMGDFDCRPTAFVYNAVFQVL--VDRGVILLALALYNRMVSSGCLPNSTTYI 218
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L K G +A KM M G PD Y+ ++ LC GR EDA +L M+EN
Sbjct: 219 VLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN 278
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PD T+T+ + G C A VD A F + + + LI+G R +
Sbjct: 279 GCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEG 338
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+ K + P + LI + A R ++A LL MK + + P
Sbjct: 339 LSYYTEMLGK-SISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVP 387
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 177/403 (43%), Gaps = 30/403 (7%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P +Y+++L +L N+ ++ L MKE+ C +E TY L L KA + + A
Sbjct: 247 PDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDE--AF 304
Query: 187 NQF---HDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL-TVLKEL 242
++F DG + + + + + +D+ + E + +S + L T+L
Sbjct: 305 HRFELLQDGGFT-LGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRR 363
Query: 243 RIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
+ F + E G+ +T YN +L+ L ++ +++ EM + +D
Sbjct: 364 FAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLD 423
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFM---------------MDGPYKPS-VQDCSLLLR 344
T+ + K +++ A+++F+ M +DG Y+ +++ +L
Sbjct: 424 STTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFH 483
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ NNP L L + SL K V DG+ ++ G+ +A K+++ + +G
Sbjct: 484 KMEMGNNPSLFLRLTLGANQVRDTESLRKLV-DGMCQS----GQVLKAYKLLRGIIESGV 538
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
PD +TY+ +I GLCKA + A + E++ G PD T+ LI G A+ + A +
Sbjct: 539 VPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATM 598
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
F ++ + + ++ K+++ A L ++ + K
Sbjct: 599 LFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPK 641
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 106/269 (39%), Gaps = 13/269 (4%)
Query: 344 RSISSI--NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
R++S + + PD +F + G + + + A + GR EA + M +
Sbjct: 113 RAVSVLLASEPDAVAMFDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGD 172
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
P Y+ V L G A + + M +GC+P+ T+ +L+ G C
Sbjct: 173 FDCRPTAFVYNAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVD 232
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AL F +M+E+ D + VL++ ++ R+ A +LL M E P + T+ +
Sbjct: 233 ALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKEN-GCPPDEVTYTVFL 291
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE----- 576
L A R++EA + L++ F + Y + A F + LS
Sbjct: 292 SGLCKAGRVDEAFHRFELLQDGG---FTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGK 348
Query: 577 --YPSSAAYLQVFESFFNEGRHYEAKDLL 603
P Y + F GR +A LL
Sbjct: 349 SISPDITLYTILIRRFAEAGRTKDAFLLL 377
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 66/337 (19%), Positives = 132/337 (39%), Gaps = 42/337 (12%)
Query: 129 STVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
ST +++M+ L K + + M E C+ TY +++ L +A + L
Sbjct: 424 STTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARML-- 481
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDW--DDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
FH ++ M N + + LG++ D + +KL D +
Sbjct: 482 FH-----KMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQ-------------V 523
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
+KA R + E SG + +TYN ++ L + +++ + +E++ +G D TY
Sbjct: 524 LKAYKLLRGIIE-SGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGT 582
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL---------V 357
+ + DA LF+ ++ PS+ + ++RS+ + +
Sbjct: 583 LIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYLPKK 642
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ ++ + E + N+ K DG DE K + + + Y+ + G
Sbjct: 643 YNLSPEDEVIANA-RKCFEDGF---------LDETVKELIKIDQVYGSLNPNPYTIWVIG 692
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
LC+ + +DA + +EE G + +LI C
Sbjct: 693 LCQVRKIDDALRIFHILEEFGIVVTPACCALLINYLC 729
>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 144/308 (46%), Gaps = 14/308 (4%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
++A G F + + G++ + +TY+ ++ + ++RD + + E+M K+ E D Y
Sbjct: 429 LEACGLFVQILK-LGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSV 487
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K ++ DA++ F ++ P+V + LL S L + Y
Sbjct: 488 LINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCR-----LKCIVGAMKVYYL 542
Query: 367 LG--NSLSKSV-YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+G N + +V Y + + + GR DEA + M F+PD ITY +I GLCK +
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ D M +N PDI + +LI H ++ AL F ++E+ D +
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+I + + KR++ A +L +M + +LRP TF LI+ R+++AM + M ++
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSE-QLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEE 721
Query: 544 NYPPFPEP 551
PEP
Sbjct: 722 G----PEP 725
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 259 HSGYKHNTITYNGILRVLARHESVR---DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
G+ + IT N IL+ + + D++N+V + G + ++ T+ + + K
Sbjct: 265 QGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRI---GPKPNVVTFSTLIDAYCKEG 321
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSK 373
++ A LF+ M P + S+L+ + + G L+ +K G L
Sbjct: 322 NLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDK----GIKLDV 377
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+ A K+G ++ K M N G P+ ++ S +I G C+ GR +AC + +
Sbjct: 378 VGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQ 437
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ + G P I T++ LI G C + + + M++K + D + VLING Q
Sbjct: 438 ILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGL 497
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
V A + + + + L P T TL++ + + AM + LM N +
Sbjct: 498 VGDALRFFFQAVNR-GLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYT 556
Query: 554 QYI---SKFGTVEDA 565
I ++FG V++A
Sbjct: 557 ILIKGAAQFGRVDEA 571
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 133/303 (43%), Gaps = 11/303 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL FF + + G N T N +L R + + V M + D TY +
Sbjct: 501 ALRFF-FQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILI 559
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESL 367
+ +F +++A+ LF M+ +KP V L+ + + GL +F K
Sbjct: 560 KGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCK---- 615
Query: 368 GNSLSK--SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
N+++ ++Y+ + ++ G + A + + G +PD T++ +I C R +
Sbjct: 616 -NAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLD 674
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
DA + +M P+ T+TILI C +D A+L F+KM+E+ + + LI
Sbjct: 675 DAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLI 734
Query: 486 NGFL-SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
+G+ SQ + KL EM+E + P ++ LI+ L ++EA R ++
Sbjct: 735 HGYFKSQSMMESGLKLYNEMLEN-NIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKH 793
Query: 545 YPP 547
P
Sbjct: 794 LLP 796
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 145/352 (41%), Gaps = 11/352 (3%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+ G N ++ + +++ ++ + + + ++ K G+E I TY + F K +
Sbjct: 405 NEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLR 464
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVY 376
D L+E M+ +P S+L+ + + L F+ N+ S ++
Sbjct: 465 DGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLL 524
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
D R +G A K+ M + D +TY+ +I G + GR ++A + +M +
Sbjct: 525 DSFCRLKCIVG----AMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLK 580
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
PD+ T+ LI G C + L F M + D + +VLIN + +
Sbjct: 581 KDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEA 640
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A L V ++E+ +P TF T+I +RL++A+ L M + P F I
Sbjct: 641 ALGLFVHVVERGP-KPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILI 699
Query: 557 SKF---GTVEDAS-EFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
F G ++DA F K L P+ Y + +F E+ LY
Sbjct: 700 DAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLY 751
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 120/291 (41%), Gaps = 9/291 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + I Y+ ++ L + + D ++ +G ++D+ + + K +
Sbjct: 336 NGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGR 395
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL---GLVFRVANKYESLGNSLSKSVY 376
+++++ M++ P+V CS+L++ N L GL ++ LG S Y
Sbjct: 396 VIQIYKRMLNEGISPNVVSCSILIKGFCQ-NGRILEACGLFVQILK----LGFEPSILTY 450
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ K G + + + M EPD I YS +I GLCK G DA +
Sbjct: 451 SALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQAVN 510
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ T L+ C + A+ + M N AD +LI G RV+
Sbjct: 511 RGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDE 570
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A L +M++K +P T+ TLI+ L ++ + + M K P
Sbjct: 571 ALMLFFQMLKK-DFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAP 620
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 119/274 (43%), Gaps = 9/274 (3%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
+K + ITY ++ L + + + + M K DI Y + + +E A+
Sbjct: 583 FKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAAL 642
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVYDGIH 380
LF +++ KP V + ++ + D + E L N+++ ++ +
Sbjct: 643 GLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTI---LI 699
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA-GRFEDACNVLDEMEENGC 439
A + GR D+A M M G EP+ +TYS +I G K+ E + +EM EN
Sbjct: 700 DAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEMLENNI 759
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+I +++ILI G C + A F ++K+ D +LI G+ R+ A
Sbjct: 760 APNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLTEAMM 819
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLL---GARRL 530
L M+ RL P + +TL E L GA+ L
Sbjct: 820 LYDNMLLN-RLTPDRFLERTLEEYQLKKAGAKHL 852
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/410 (23%), Positives = 173/410 (42%), Gaps = 49/410 (11%)
Query: 167 YLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWD--DKIGKKLE 224
YL I K DL +N FH + S W+ K L
Sbjct: 25 YLPIPHRTLPQPKGQDLDFINIFHSHFIH-----------------SQWEKLTPFSKTLT 67
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD 284
KI+ +L +L+ V +L FF WV H+ H T++ +L +L ++ + +
Sbjct: 68 PFKIQ-------HILLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRNFKT 120
Query: 285 FWNVVEEMKKEG---YEMDIDTYI----------KISRQFQKFRMMEDAVKLFEFMMDGP 331
++ ++ +E + +Y + + F + +A F M +
Sbjct: 121 AQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYG 180
Query: 332 YKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVY--DGIHRALTKLGR 388
+ P+V+ C+ L S+ + P+L + F Y + N +S +VY + + A KLG
Sbjct: 181 FFPTVESCNAFLSSMLYLKRPELVVSF-----YRQMRRNRISPNVYTINMVVSAYCKLGE 235
Query: 389 FDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD-EMEENGCIPDIKTWT 447
++A ++++ MK+ G P+ +T++ +I G C G A V D M +NG P++ T+
Sbjct: 236 LNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFN 295
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G C ++ A F++M N + + LINGF L EM E+
Sbjct: 296 TLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEM-ER 354
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
+++ T+ LI L + ++A +++ + K N P F I+
Sbjct: 355 NKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIA 404
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/428 (20%), Positives = 176/428 (41%), Gaps = 30/428 (7%)
Query: 85 KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
KL S LT + ++L KL ND + FFNWV + +S +L L +
Sbjct: 58 KLTPFSKTLTPFKIQHILLKLQNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNRN 117
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
K T SI + + L+ + + D + K
Sbjct: 118 FK-------------------TAQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFK 158
Query: 205 TLVDVVLGSDWDDKIGKKLEDM---KIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
T + + D K E +E + F+ ++L R P + F+R + +
Sbjct: 159 TFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFLSSMLYLKR--PELVVSFYRQM-RRNR 215
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
N T N ++ + + V+E+MK G ++ T+ + + ++ A+
Sbjct: 216 ISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLAL 275
Query: 322 KLFEFMM--DGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
K+ + MM +G + P+V + L+ L RV ++ + + + Y+ +
Sbjct: 276 KVRDLMMGKNGVF-PNVVTFNTLINGFCK--EGKLHEANRVFSEMKLANVAPNVVTYNTL 332
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ G + + + M+ + D +TY+ +I GLCK G+ + A ++ E+++
Sbjct: 333 INGFGQAGNSEMGIGLFEEMERNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNL 392
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+P+ T++ LI G C N +RA L + M+ + + + +L + F + +GA +
Sbjct: 393 VPNASTFSALIAGQCVRNNSERAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQ 452
Query: 500 LLVEMIEK 507
+L +M+E+
Sbjct: 453 VLRDMLER 460
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 108/259 (41%), Gaps = 16/259 (6%)
Query: 261 GYKHNTITYNGILR------VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
G N +T+N ++ +L VRD M K G ++ T+ + F K
Sbjct: 250 GLCPNVVTFNSLISGYCDKGLLGLALKVRDLM-----MGKNGVFPNVVTFNTLINGFCKE 304
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSK 373
+ +A ++F M P+V + L+ N ++G+ +F + + + L+
Sbjct: 305 GKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNKVKADILT- 363
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+G+ L K G+ +A M+K + P+ T+S +I G C E A V
Sbjct: 364 --YNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAFLVYRS 421
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M +G P+ T+ +L C + D A+ M+E+ D+ +L + +G R
Sbjct: 422 MVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVYSGLCRCGR 481
Query: 494 VNGAYKLLVEMIEKVRLRP 512
A L E IE RL P
Sbjct: 482 KQFALMLCSE-IEAKRLLP 499
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 5/210 (2%)
Query: 361 ANKYESLGNSL-----SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+N +ESL +S S V+D + + + + A MK GF P + + +
Sbjct: 133 SNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKMKEYGFFPTVESCNAFL 192
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ R E + +M N P++ T +++ +C E+++A KM +
Sbjct: 193 SSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGELNKASEVLEKMKDMGLC 252
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ + LI+G+ + + A K+ M+ K + P TF TLI +L EA
Sbjct: 253 PNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNTLINGFCKEGKLHEANR 312
Query: 536 LLRLMKKQNYPPFPEPFVQYISKFGTVEDA 565
+ MK N P + I+ FG ++
Sbjct: 313 VFSEMKLANVAPNVVTYNTLINGFGQAGNS 342
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 160/377 (42%), Gaps = 40/377 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ +TIT N +++ L V+ + +++ +G++MD +Y + K A
Sbjct: 75 GYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCA 134
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISS---INN--------------PD---------- 353
VKL + D +P+V + ++ + +N PD
Sbjct: 135 VKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYG 194
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIH------RALTKLGRFDEAEKMMKAMKNAGFEPD 407
L+ ++ + L + K++ G++ AL K G EA+ ++ M G +P
Sbjct: 195 FCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPG 254
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TYS ++ G C G ++A + M + G P++ ++ I+I G C VD A+
Sbjct: 255 VVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLR 314
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ-ATFKTLIEKLLG 526
+M+ KN D + LI+G R+ A L+ EM R +P T+ +L++ L
Sbjct: 315 EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHH--RGQPADVVTYTSLLDALCK 372
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEYPSSA-A 582
+ L++A L MK++ P + I K G +++A E + L VK
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 432
Query: 583 YLQVFESFFNEGRHYEA 599
Y + EG EA
Sbjct: 433 YTVMISGLCKEGMFDEA 449
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 137/338 (40%), Gaps = 37/338 (10%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A+ R + + S + N + YN I+ L + + V + +++ EM G D TY +
Sbjct: 134 AVKLLRMIEDRS-TRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLI 192
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN----------------- 351
F + A L + M+ P V ++L+ ++ N
Sbjct: 193 YGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIK 252
Query: 352 PDL----------GLVFRVANKYE------SLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
P + LV V N + +G + + Y+ + L K R DEA +
Sbjct: 253 PGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNL 312
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
++ M + PD +TY+ +I GLCK+GR A N+++EM G D+ T+T L+ C
Sbjct: 313 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK-VRLRPWQ 514
+D+A F KM E+ LI+G R+ A +L ++ K + W
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVW- 431
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
T+ +I L +EA+ + M+ P F
Sbjct: 432 -TYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 119/272 (43%), Gaps = 33/272 (12%)
Query: 269 YNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMM 328
YN ++ L + +V++ N++ M KEG + + TY + + +++A ++F M+
Sbjct: 223 YNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMV 282
Query: 329 DGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK--------YESLGNSLSKS---- 374
P+V ++++ + D + L+ + +K Y SL + L KS
Sbjct: 283 QMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRIT 342
Query: 375 -------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
Y + AL K D+A + MK G +P TY+ +I
Sbjct: 343 SALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALI 402
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GLCK GR ++A + + GC D+ T+T++I G C D AL +KM +
Sbjct: 403 DGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCI 462
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+A +++I + + A KLL EMI K
Sbjct: 463 PNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 494
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/354 (21%), Positives = 150/354 (42%), Gaps = 8/354 (2%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I +N IL LA+ + ++ ++M+ +G + T + F M + +
Sbjct: 11 IEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGK 70
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++ Y+P + L++ + L F +K + G + Y + L K+
Sbjct: 71 ILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFH--DKVVAQGFQMDHVSYGTLLNGLCKI 128
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G A K+++ +++ P+ + Y+ +I GLCK +A ++ EM+ G PD T+
Sbjct: 129 GETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITY 188
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T LI G C ++ A +M+ KN + + ++LIN + V A LL M
Sbjct: 189 TTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM-T 247
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVE 563
K ++P T+ TL++ ++ A + M + P + + + K V+
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307
Query: 564 DASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI 616
+A L+ + K P + Y + + GR A +L+ + HH Q + +
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNE-MHHRGQPADV 360
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 104/249 (41%), Gaps = 41/249 (16%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
H +T+TYN ++ L + + N++ EM G D+ TY + K + ++
Sbjct: 318 HKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 377
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A LF M + +P++ Y
Sbjct: 378 KATALFMKMKERGIQPTMY-------------------------------------TYTA 400
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K GR A+++ + + G D TY+ +I GLCK G F++A + +ME+NG
Sbjct: 401 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 460
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
CIP+ T+ I+I+ +E D+A K++ + +LD + Q + A
Sbjct: 461 CIPNAVTFEIIIRSLFEKDENDKA----EKLLHEMIAKGLLVLDFKVADVFVQNENDKAE 516
Query: 499 KLLVEMIEK 507
KLL EMI K
Sbjct: 517 KLLHEMIAK 525
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 88/236 (37%), Gaps = 38/236 (16%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P I +++++ L K ++ A ++ +ME G + T ILI C ++ +
Sbjct: 8 PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRV--------------------------NGAYK 499
K+++ Y D L+ L+ G + V NG K
Sbjct: 68 LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127
Query: 500 L--------LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ L+ MIE RP + T+I+ L + + EA +L M + P
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187
Query: 552 FVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ I F G + A L + +K P Y + + EG EAK+LL
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLL 243
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 152/360 (42%), Gaps = 42/360 (11%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL R + G + ++YN +L+ L + +++EEM + G ++ T+ +
Sbjct: 207 EALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTL 266
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ + E ++ M+D P ++
Sbjct: 267 IGYLCRNGLFERVHQVLAQMVDHGCTPDIR------------------------------ 296
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ +V DG+ K G + A +++ M + G +P+ + Y+ V+ GLC A R+E A
Sbjct: 297 ---MYATVLDGV----CKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQA 349
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+L EM +N C D T+ IL+ C V R + +M+E D +ING
Sbjct: 350 EELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVING 409
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F + ++ A LL M RP ++ +++ L A R +A +L+ M +Q P
Sbjct: 410 FCKEGLIDEAVMLLKSM-AACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468
Query: 548 FPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
P F + ++ K G VE A E LK + + P +Y V + G+ EA +LL
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 156/380 (41%), Gaps = 38/380 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N +T+N ++ L R+ V+ +M G DI Y + K +E A
Sbjct: 255 GCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVA 314
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSI---------------NNPDL----------- 354
++ + M KP+V + +L+ + S N+ L
Sbjct: 315 HEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDF 374
Query: 355 ----GLVFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
GLV+RV E + G Y + K G DEA ++K+M G P+
Sbjct: 375 FCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPN 434
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
I+Y+ V+ GLC A R+ DA +++ +M E GC P+ T+ +I C V++A+
Sbjct: 435 TISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLK 494
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M+ D +I+G + + A +LL M+ K + P + ++ L
Sbjct: 495 QMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNK-GMSPNTIIYSSIASALSKE 553
Query: 528 RRLEEAMNL---LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK-ALSVKEYPSSAAY 583
R+ + + ++ + ++ + + K G + A EFL +S P+ + Y
Sbjct: 554 GRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTY 613
Query: 584 LQVFESFFNEGRHYEAKDLL 603
+ +EG EA+++L
Sbjct: 614 TILIRGLASEGFVKEAQEML 633
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/346 (21%), Positives = 147/346 (42%), Gaps = 8/346 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY---IKISRQFQKFRMMEDAV 321
N TY ++R L + D +V++EM++ G Y ++ + AV
Sbjct: 114 NAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSAV 173
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHR 381
++ + + V +C+L+L ++ + + + S G Y+ + +
Sbjct: 174 RVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLK 233
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
L R+ + +M+ M G P+ +T++ +I LC+ G FE VL +M ++GC P
Sbjct: 234 GLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTP 293
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
DI+ + ++ G C ++ A +M + + ++ G S +R A +LL
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELL 353
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
EM + TF L++ + + LL M + P + I+ F
Sbjct: 354 AEMFDN-DCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412
Query: 560 -GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
G +++A LK+++ P++ +Y V + + R +A+DL+
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLM 458
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 93/193 (48%), Gaps = 2/193 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G + NTI+Y +L+ L E D +++ +M ++G + T+ + K ++E
Sbjct: 429 CGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQ 488
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A++L + M+ P + S ++ + D L + N + G S + +Y I
Sbjct: 489 AIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEAL--ELLNVMVNKGMSPNTIIYSSI 546
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
AL+K GR + +M +++ D + Y+ VI LCK G + A L M +GC
Sbjct: 547 ASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGC 606
Query: 440 IPDIKTWTILIQG 452
+P+ T+TILI+G
Sbjct: 607 MPNESTYTILIRG 619
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 113/278 (40%), Gaps = 33/278 (11%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+T+N ++ ++ V ++E+M + G D+ TY + F K ++++AV L +
Sbjct: 366 VTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKS 425
Query: 327 MMDGPYKPSVQDCSLLLRSISS----INNPDL--------------------------GL 356
M +P+ +++L+ + S ++ DL GL
Sbjct: 426 MAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGL 485
Query: 357 VFRVANKYESL---GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
V + + + G S Y + L K G+ DEA +++ M N G P+ I YS
Sbjct: 486 VEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSS 545
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ L K GR + D +++ D + +I C DRA+ A M+
Sbjct: 546 IASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSG 605
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLR 511
+ +LI G S+ V A ++L E+ K LR
Sbjct: 606 CMPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALR 643
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 99/242 (40%), Gaps = 11/242 (4%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + + G+ A ++ ++ P+ TY V+ LC GR DA +VLDEM
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVP---VPPNAYTYFPVVRALCARGRIADALSVLDEMR 142
Query: 436 ENGCIPDIKTWTILIQGHCA---ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ- 491
GC P + ++++ C+ A+ + + D ++++N Q
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
V+ A +LL ++ P ++ +++ L A+R +L+ M + PP
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262
Query: 552 F---VQYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCP 607
F + Y+ + G E + L + + P Y V + EG A ++L + P
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322
Query: 608 HH 609
+
Sbjct: 323 SY 324
>gi|410109873|gb|AFV61016.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
citrodora]
Length = 380
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 152/338 (44%), Gaps = 8/338 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
A F + E G + + I ++G++ +RD ++ + + +DT K+
Sbjct: 46 ASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPLDTCRKV 105
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + + ++ +++ Y S+ ++L++ D+ + V N
Sbjct: 106 LEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFC--KEGDIRVAQLVLNAITKW 163
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G S ++ + +LG DE ++ AM +G +PD TYS +I GLCK + +DA
Sbjct: 164 GLRPSVVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 223
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ DEM + G +P+ T+T LI GHC VD A+ + +M+ ++ D + LI G
Sbjct: 224 NELFDEMLDKGMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYG 283
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ + A+ L+ EM + L+P + T+ TLI+ +E A + M ++N
Sbjct: 284 LCKKGELKQAHDLIDEMSME-GLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRL 342
Query: 548 FPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSA 581
+ IS G DA + L+ LSV P++
Sbjct: 343 DDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNTG 380
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 91/216 (42%), Gaps = 5/216 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L KL F K + G+ ++ ++ CK G A VL+ + + G P
Sbjct: 109 LMKLKYFKLVWGFYKEILECGYPASLYFFNILMQRFCKEGDIRVAQLVLNAITKWGLRPS 168
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ ++ LI G+ ++D + M D VLING + +++ A +L
Sbjct: 169 VVSFNTLINGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFD 228
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKF 559
EM++K + P TF TLI+ R++ AM + + M Q+ P + + K
Sbjct: 229 EMLDK-GMVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKK 287
Query: 560 GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEG 594
G ++ A + + +S++ P Y + + EG
Sbjct: 288 GELKQAHDLIDEMSMEGLKPDKITYTTLIDGCCKEG 323
>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 1 [Brachypodium distachyon]
gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like isoform 2 [Brachypodium distachyon]
Length = 704
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 131/286 (45%), Gaps = 5/286 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + YN +L+ V + W + M G ++ +Y + + M++
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387
Query: 320 AVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A L+E + D P + S ++ + + L ++ + + G L + Y
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSL--QILEEARTSGKELDEFSYSS 445
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K GR D+A K+ + + F+P++ Y+ +I G C+A +F DA V +M EN
Sbjct: 446 MISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAEND 505
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P T+ LI G C A + A +M+EK D + LI G K+++GA
Sbjct: 506 CSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGAL 565
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L ++++K L+ LI L A +++EA LL MK++N
Sbjct: 566 ALWNQILDK-GLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKN 610
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 121/272 (44%), Gaps = 37/272 (13%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T++ ++ L ++EE + G E+D +Y + K ++DAVKL+
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
E + +KP+ +Y+ +
Sbjct: 464 EKISMDSFKPNSH-------------------------------------IYNALINGFC 486
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ +F +A ++ M P ITY+ +I GLCKA ++ +A EM E GC+ D+
Sbjct: 487 QASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVN 546
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI+G C ++D AL + ++++K D + ++LI+G S +V+ A +LL EM
Sbjct: 547 TYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEM 606
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
EK P T+ TL++ ++A +L
Sbjct: 607 KEKNNCCPNVVTYNTLMDGFYETGCFDKAASL 638
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 91/189 (48%), Gaps = 5/189 (2%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
TITYN ++ L + E + EM ++G +D++TY + R + + ++ A+ L+
Sbjct: 510 TITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWN 569
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRAL 383
++D + V ++L+ + S D L+ + K N ++ Y+ +
Sbjct: 570 QILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVT---YNTLMDGF 626
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G FD+A + A+ G PD I+Y+ I GLC R + +L+EM +G IP
Sbjct: 627 YETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTA 686
Query: 444 KTWTILIQG 452
TW IL++
Sbjct: 687 ITWNILVRA 695
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 141/323 (43%), Gaps = 15/323 (4%)
Query: 231 SDNFVLTVLKELR--IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRD---- 284
S++ L VL + P AL FR + G ++N +L R D
Sbjct: 83 SESAALVVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAF 142
Query: 285 FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLR 344
F ++ ++ TY + R ++ AV LF+ + P S L+
Sbjct: 143 FASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMS 202
Query: 345 SISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM-KNA 402
N D L + YE +++ Y+ + + G F++A ++ + + ++
Sbjct: 203 GFVKNNRLDNALYLLDEMPSYEVQPDAV---CYNALLGGCFRNGEFEKAMRVWEQLVRDP 259
Query: 403 GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA 462
G P+ TY+ ++ GLCK G F++A +V + M N PD+ T+ +I G C + +VD A
Sbjct: 260 GASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSA 319
Query: 463 LLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM-IEKVRLRPWQATFKTLI 521
+++M++ D + + L+ GF RV A+K M + +R ++ ++
Sbjct: 320 ARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRN---VTSYNIML 376
Query: 522 EKLLGARRLEEAMNLLRLMKKQN 544
+ L +++A +L L++K +
Sbjct: 377 KGLFDGGMVDKATDLWELLEKDD 399
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 120/271 (44%), Gaps = 12/271 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + + +Y+ ++ L + + D + E++ + ++ + Y + F + D
Sbjct: 434 SGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSD 493
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY--ESL--GNSLSKSV 375
A++++ M + P+ + L+ + + A+++ E L G L +
Sbjct: 494 AIRVYSQMAENDCSPTTITYNTLIHGLCKAEK------YLEASRFTREMLEKGCMLDVNT 547
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + R L + + D A + + + G + D + ++ +I GLC AG+ ++A +L EM+
Sbjct: 548 YGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMK 607
Query: 436 E-NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E N C P++ T+ L+ G D+A + ++E D + I G S R
Sbjct: 608 EKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRT 667
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+LL EM+ + P T+ L+ ++
Sbjct: 668 PEGVQLLNEMLAS-GIIPTAITWNILVRAVI 697
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 105/268 (39%), Gaps = 11/268 (4%)
Query: 341 LLLRSISSINNPDLGLV-FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM 399
++L + S PD L FR + LG + ++ + A + RF +A+ ++
Sbjct: 89 VVLSAFSRALMPDAALAAFRRLPSF--LGCNPGVRSHNALLDAFVRARRFSDADAFFASL 146
Query: 400 KNAGF----EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ F P+ TY+ ++ LC G + A + D + G PD T++ L+ G
Sbjct: 147 SHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVK 206
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
N +D AL +M DA + L+ G A ++ +++ P A
Sbjct: 207 NNRLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLA 266
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED----ASEFLKA 571
T+ +++ L +EA ++ M N+ P + I D A + +
Sbjct: 267 TYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEM 326
Query: 572 LSVKEYPSSAAYLQVFESFFNEGRHYEA 599
+ P Y + + F + GR EA
Sbjct: 327 IKTGLVPDVVIYNSLLKGFCHAGRVGEA 354
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 154/347 (44%), Gaps = 7/347 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ + + + +V EM+ G D+ TY + F KF ME A
Sbjct: 224 GCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERA 283
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
F M +V S + + N + ++ + G ++ Y +
Sbjct: 284 YSYFAEMKREGVMANVVTFSTFVDAFC--KNGMVREAMKLFAQMRMKGMKPNEVTYTCLV 341
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K GR D+A + M G + +TY+ ++ GLCK G+ +A +V ME G
Sbjct: 342 DGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIR 401
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ +T LI GH +RAL ++M +K + D L LI G + ++++ A L
Sbjct: 402 ANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSL 461
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
L +M ++ L+P + +++ AR+ EA+ LL+ M + P + V +
Sbjct: 462 LNKM-DECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLC 520
Query: 558 KFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G++++A S F K + + P+ AY + + GR +A LL
Sbjct: 521 KAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLL 567
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G N +TY ++ L + V + +V M++ G + Y + ++ E
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSE 421
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDG 378
A+ L M D + V L+ + ++ D + NK + G + +Y
Sbjct: 422 RALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEA--KSLLNKMDECGLKPNNVIYTN 479
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I A K + EA +++ M ++GF P+ +TY ++ GLCKAG ++A + ++M + G
Sbjct: 480 IMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLG 539
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P+++ +T L+ G C +D+A+L +M++K D + L++G L Q + A+
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599
Query: 499 KLLVEMI 505
L +MI
Sbjct: 600 ALKAKMI 606
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 2/247 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N +TY ++ + + D + EM ++G +++ TY + K + +A
Sbjct: 329 GMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEA 388
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+F M + + + L+ N + L + ++ + G L S+Y +
Sbjct: 389 EDVFRLMERAGIRANELLYTTLIHGHFVYKNSERAL--SLLSEMKDKGMELDVSLYGALI 446
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L L + DEA+ ++ M G +P+N+ Y+ ++ KA + +A +L +M ++G
Sbjct: 447 WGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFR 506
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ L+ G C A +D A+ F KM++ + + L++G R++ A L
Sbjct: 507 PNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLL 566
Query: 501 LVEMIEK 507
L EMI+K
Sbjct: 567 LDEMIDK 573
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 16/287 (5%)
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
FR + E +G + N + Y ++ +++ +++ EMK +G E+D+ Y +
Sbjct: 392 FRLM-ERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLC 450
Query: 313 KFRMMEDAVKLFEFMMDGPYKPS------VQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ +++A L M + KP+ + D R S + K
Sbjct: 451 NLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESE--------AIALLQKMMD 502
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G + Y + L K G DEA M + G EP+ Y+ ++ GLCK GR +
Sbjct: 503 SGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDK 562
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LDEM + G D T L+ GH + A AKM+ D +
Sbjct: 563 AVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVW 622
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
GF + + A ++L EMIE + P + LI K +EEA
Sbjct: 623 GFCNLNMIQEAREVLSEMIEN-GITPDAVVYNCLINKCQKLGNMEEA 668
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ T++ +I LCK G +A +L M+ GC PD+ T+ LI G+ E++
Sbjct: 192 PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKL 251
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M D + L+N F R+ AY EM ++ + TF T ++
Sbjct: 252 VGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEM-KREGVMANVVTFSTFVDAFC 310
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSA 581
+ EAM L M+ + P + V K G ++DA + + P +
Sbjct: 311 KNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVV 370
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + + EG+ EA+D+
Sbjct: 371 TYTVLVDGLCKEGKVAEAEDV 391
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 155/378 (41%), Gaps = 9/378 (2%)
Query: 228 IELSDNFVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK +R P A FF W G+ Y H Y ++ VL+
Sbjct: 115 IKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRV 174
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ E K++G+ M + + R F M+E+ + ++ M + +PS+ + LL
Sbjct: 175 RCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNG 234
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ +N+ + RV E Y+ + + K G +A + M+ E
Sbjct: 235 L--VNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLE 292
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD ITY +I G F+ ++ EMEE G ++++I G C
Sbjct: 293 PDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSV 352
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F M +K A+ + LI+ + VN A L E ++ P T+ ++ L
Sbjct: 353 FENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLF-ERMKGEGFEPDDVTYGVIVNGLC 411
Query: 526 GARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSVKEYPS-SA 581
+ RL+EA+ K F + + K G V++A +F + + + P S
Sbjct: 412 KSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSY 471
Query: 582 AYLQVFESFFNEGRHYEA 599
Y + ++ G+ EA
Sbjct: 472 CYNALIDALAKSGKMEEA 489
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 39/276 (14%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N Y ++ ++ +V + N+ E MK EG+E D TY I K +++A
Sbjct: 360 GCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEA 419
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V+ FEF D N + +F Y SL + L K+
Sbjct: 420 VEYFEFCKD--------------------NEVAVNAMF-----YSSLIDGLGKA------ 448
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
GR DEAEK + M G D+ Y+ +I L K+G+ E+A + ME+ GC
Sbjct: 449 ------GRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCD 502
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
+ T+TILI G + + AL + M++K L G +V A K+
Sbjct: 503 QTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKI 562
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
L E+ + + P + F+ +I L A R E+A L
Sbjct: 563 LDEL-APMGVIP-ETAFEDMINVLCKAGRTEQACKL 596
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 142/342 (41%), Gaps = 8/342 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ ++YN +++ + + + +M+K E D TY+ + + + + L+
Sbjct: 259 DVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLY 318
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M + + SL++ + G VF NK G + ++Y + A
Sbjct: 319 QEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKK---GCKANVAIYTALIDAY 375
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
K G +EA + + MK GFEPD++TY ++ GLCK+GR ++A + ++N +
Sbjct: 376 GKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNA 435
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
++ LI G A VD A F +M+E+ D+ + LI+ ++ A L
Sbjct: 436 MFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKR 495
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY---ISKFG 560
M EK T+ LI L R EEA+ L LM + P F + G
Sbjct: 496 M-EKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSG 554
Query: 561 TVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
V A + L L+ A+ + GR +A L
Sbjct: 555 KVARACKILDELAPMGVIPETAFEDMINVLCKAGRTEQACKL 596
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 135/326 (41%), Gaps = 19/326 (5%)
Query: 298 EMDIDTY-----IKISRQFQKFRMMEDAVK-----LFEFMM-DGPYKPSVQ--DCSLLLR 344
E ++D+Y IK+S F F + DA++ F F G K + +C + L
Sbjct: 103 ESNLDSYCSKFLIKLSPNFVAFVLKSDAIRGKPDIAFRFFWWAGKQKNYIHKIECYVSLI 162
Query: 345 SISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ S+++ D V + +++ G ++ + + R+ LG +E + + MK +G
Sbjct: 163 DVLSLSS-DFDRVRCIFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGI 221
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
EP T++ ++ GL + E A V + ME PD+ ++ +I+G+C A +A+
Sbjct: 222 EPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAME 281
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F M ++N + D LI S+ + L EM E+ P A + +I L
Sbjct: 282 KFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHA-YSLVIGGL 340
Query: 525 LGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSS 580
R E ++ M K+ + I + G V +A + + + + P
Sbjct: 341 CKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDD 400
Query: 581 AAYLQVFESFFNEGRHYEAKDLLYKC 606
Y + GR EA + C
Sbjct: 401 VTYGVIVNGLCKSGRLDEAVEYFEFC 426
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 158/396 (39%), Gaps = 75/396 (18%)
Query: 81 ELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLV 140
E+E + E+ P + V+ L K E +S F N +KK + + +Y+ ++
Sbjct: 320 EMEERGLEIPPH-AYSLVIGGLCKDGRTVEGSSVFENM--NKKGCKANVAIYTALIDAYG 376
Query: 141 NKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMD 200
++ + RMK + ++ TY I+ L K+ + + A+ F E D
Sbjct: 377 KNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDE--AVEYF------EFCKD 428
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
N + V+ + S D +GK +++ ++ F +++
Sbjct: 429 N--EVAVNAMFYSSLIDGLGKA---GRVDEAEKFFEEMVER------------------- 464
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMED 319
G ++ YN ++ LA+ + + + + M+KEG + + TY I IS F++ R E+
Sbjct: 465 GCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRN-EE 523
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KL++ M+D P+ FR S+G LS
Sbjct: 524 ALKLWDLMIDKGITPTTAS-------------------FRAL----SVGLCLS------- 553
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
G+ A K++ + G P+ + +I LCKAGR E AC + D + + G
Sbjct: 554 -------GKVARACKILDELAPMGVIPET-AFEDMINVLCKAGRTEQACKLADGIVDRGR 605
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ TILI A D A+ + YD
Sbjct: 606 EVPGRVRTILINALRKAGNADLAMKLMHSKIGIGYD 641
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 133/319 (41%), Gaps = 6/319 (1%)
Query: 288 VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS 347
V E++ K G + D+ TY I K + + A++ + M+ + P + C ++ +
Sbjct: 136 VFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLC 195
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
DL + + +S LS VY+ + + GR D+A+ + M+ G EPD
Sbjct: 196 DGRKVDLAYEL-IIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPD 254
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TY+ + C +DA +L ME +G PD+ ++ L++G C N D+A L
Sbjct: 255 LVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMT 314
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
M D + +I F AYKL EM +K + P TF I+ LG
Sbjct: 315 NKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQK-GIPPDVVTFTIFIKAFLGK 373
Query: 528 RRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA-SEFLKALSVKEYPSSAAY 583
A LL M + P F + ++ K G VE A S F + P ++
Sbjct: 374 GSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISF 433
Query: 584 LQVFESFFNEGRHYEAKDL 602
+ F R EA L
Sbjct: 434 NALINGFCKCSRVSEAMHL 452
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 169/420 (40%), Gaps = 77/420 (18%)
Query: 166 TYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
TY I+ + K KK A+ + D + K + DN A + V L +
Sbjct: 151 TYTIIIHGVCKIKKFD--TAIQFWRDMIHKGFSPDNKACGAIVVGL-----------CDG 197
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
K++L+ ++ V+K R+ K +T+ YN ++ R +
Sbjct: 198 RKVDLAYELIIDVMKSGRV------------------KLSTLVYNALISGFCRAGRIDKA 239
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
+ M++ G E D+ TY F M++DA KL + M +P V + LL+
Sbjct: 240 QAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKG 299
Query: 346 ISSINNPDLGLVFRVANKY-ESLGNSLSKSVYDGIHRALTKLG----------------- 387
I N PD + + + L + +S Y+ I +A K+G
Sbjct: 300 ICKGNCPDKAYLLMTNKMWPKGLCDVVS---YNTIIKAFCKIGDTTSAYKLFEEMGQKGI 356
Query: 388 ------------------RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
F+ A+K++ M G PD I Y+ +I LCK+G+ E A +
Sbjct: 357 PPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHS 416
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ +M E G PD+ ++ LI G C + V A+ + +M + D ++I G +
Sbjct: 417 IFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLI 476
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN--LLRLMKKQNYPP 547
+K+++ A + +M++K +A +TLI +E A L QNY P
Sbjct: 477 EEKKISIACMVWGQMMDK-GFTLDRAIAQTLIR----GNSIENASTSRCLDFKFHQNYSP 531
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 104/222 (46%), Gaps = 7/222 (3%)
Query: 358 FRVANKYESL----GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
F +AN Y S G SLS Y L K+ F ++++ M+ PD ++
Sbjct: 60 FDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNI 119
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+ L GR + A V +++ +NG PD+ T+TI+I G C + D A+ + M+ K
Sbjct: 120 YLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKG 179
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+ D ++ G ++V+ AY+L++++++ R++ + LI A R+++A
Sbjct: 180 FSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKA 239
Query: 534 MNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKAL 572
+ M++ P F+ Y ++DA + LK +
Sbjct: 240 QAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLM 281
>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
Length = 552
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 143/302 (47%), Gaps = 3/302 (0%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYI 305
P +++ + + K N TYN ++R + + + WNVV +M G + D+ TY
Sbjct: 134 PEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYN 193
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
I+ + + ++ A + M + +P+ + C +++ + R A + +
Sbjct: 194 TIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYC--KEGRIREALRFAYRMK 251
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
LG + +++ + + + D ++++ M+ G +PD IT+S ++ AG E
Sbjct: 252 ELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFME 311
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+ D+M + G PD ++IL +G+ A E ++A M++ + + + +I
Sbjct: 312 KCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGFQPNVVIFTTVI 371
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G+ S +++ A ++ +M ++ + P TF+TLI AR+ +A +L++M +
Sbjct: 372 SGWCSAGKMDYAVRVFDKMCQR-GISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEV 430
Query: 546 PP 547
P
Sbjct: 431 QP 432
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/386 (22%), Positives = 160/386 (41%), Gaps = 43/386 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G ++I +N ++ + ++ +M++ G + TY + + +
Sbjct: 75 EENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKP 134
Query: 318 EDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
E++VKL E M +G KP+++ ++L+R+ N + + V K + G Y
Sbjct: 135 EESVKLLELMSQEGNVKPNLRTYNVLVRAWC--NKKRITEAWNVVYKMIASGIQPDVVTY 192
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC-------- 428
+ I A + G D+AE ++ M+N G +P+ T ++ G CK GR +A
Sbjct: 193 NTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKE 252
Query: 429 ---------------------------NVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
VL+ MEE G PD+ T++ ++ A +++
Sbjct: 253 LGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTIMNAWSTAGFMEK 312
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
F M++ + DA +L G++ + A +LL MI K +P F T+I
Sbjct: 313 CREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMI-KSGFQPNVVIFTTVI 371
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVED---ASEFLKALSVKEY- 577
A +++ A+ + M ++ P + F I F A E L+ ++ E
Sbjct: 372 SGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEEILQIMTEFEVQ 431
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P + L V E++ G EA LL
Sbjct: 432 PEKSTMLLVAEAWRATGMTKEANRLL 457
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 131/294 (44%), Gaps = 12/294 (4%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G+K + I+Y +L L + ++++ ++++ G D + + F + ME
Sbjct: 41 EGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNME 100
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD-----LGLVFRVANKYESLGNSLSK 373
A++ F M + KP+ + L++ P+ L L+ + N +L
Sbjct: 101 SAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNL------ 154
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y+ + RA R EA ++ M +G +PD +TY+ + + G + A V+ E
Sbjct: 155 RTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQKGALDQAEGVILE 214
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M+ NG P+ +T I++ G+C + AL +M E + + + LI GF++
Sbjct: 215 MQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYRMKELGIHPNLVIFNSLIKGFVAIMD 274
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+G ++L ++E+ ++P TF T++ A +E+ + M K P
Sbjct: 275 RDGVDEVL-NLMEEFGVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEP 327
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/361 (19%), Positives = 141/361 (39%), Gaps = 75/361 (20%)
Query: 105 LDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEE 164
+ PE++ + + +P+ Y++++R NK + + W + +M +
Sbjct: 130 IAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDV 189
Query: 165 ETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE 224
TY +I A + AL+Q +G++ E+ + V + K G+ E
Sbjct: 190 VTYNTI------ATAYAQKGALDQ-AEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIRE 242
Query: 225 DMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR---VLARHES 281
++ +KEL I+P N + +N +++ + +
Sbjct: 243 ALRFAYR-------MKELGIHP------------------NLVIFNSLIKGFVAIMDRDG 277
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
V + N++EE G + D+ T+ I + ME ++F+ M+ +P S+
Sbjct: 278 VDEVLNLMEEF---GVKPDVITFSTIMNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSI 334
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKN 401
L + P ++AE+++ M
Sbjct: 335 LAKGYVRAQEP-------------------------------------EKAEELLTTMIK 357
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
+GF+P+ + ++ VI G C AG+ + A V D+M + G P++KT+ LI G A + +
Sbjct: 358 SGFQPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWK 417
Query: 462 A 462
A
Sbjct: 418 A 418
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 4/227 (1%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + G+ EAE + ++ G +P I+Y+ ++ L RF+ +++ ++EENG PD
Sbjct: 23 LVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTMQKRFDSIYSIISQVEENGMNPD 82
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ +I + ++ A+ F KM E + LI G+ + + KLL
Sbjct: 83 SIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTSTYNTLIKGYGIAGKPEESVKLLE 142
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP----FPEPFVQYISK 558
M ++ ++P T+ L+ +R+ EA N++ M P + Y K
Sbjct: 143 LMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKMIASGIQPDVVTYNTIATAYAQK 202
Query: 559 FGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ L+ + P+ + + EGR EA Y+
Sbjct: 203 GALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRIREALRFAYR 249
>gi|224127568|ref|XP_002329310.1| predicted protein [Populus trichocarpa]
gi|222870764|gb|EEF07895.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/385 (24%), Positives = 172/385 (44%), Gaps = 28/385 (7%)
Query: 210 VLGSDWDDKIGKKL--EDMKIELSDNFVLTVLKELRIY---PVKALGFFRWV-GEHSGYK 263
V+ W + + K D + + V VL L +Y P + F+W+ YK
Sbjct: 22 VIKGSWKNLLRPKFGSNDYHLITTTATVRQVLLHLSLYDQSPCLSWALFKWIESSVPNYK 81
Query: 264 HNTITYNGILRVLARHE------------SVRDFWN---VVEEMKKEGYEMDIDTYIK-- 306
H+ + +L +L +H+ + +DF + V+ + K + D+++++
Sbjct: 82 HSLQSSWTMLYILTKHKHFKTAHAFLENIAFKDFLSTQSVLSSLVKIHDDPDVNSHVLSW 141
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + +M +A+++FE M ++P + C++LL S++ D V+++ K
Sbjct: 142 LVIVYGNSKMTHEAIQVFEHMRVNGFRPHLHACTVLLNSLAKDRLTDT--VWKIYKKMVK 199
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG + VY+ + A K G ++AEK++ M+ PD TY+ +I CK G +
Sbjct: 200 LGVVANIHVYNVLLHACCKSGDVEKAEKVLSEMELKCVFPDLFTYNTLISLYCKKGMHYE 259
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +V D ME G PDI T+ LI G C + A+ F + K+ + LI+
Sbjct: 260 ALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI--KDVTPNHVTYTSLID 317
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G+ ++ A +L M EK L P T+ +++ KL RL +A LL M ++
Sbjct: 318 GYCRVNDLDEALRLKEVMSEK-GLYPTVITYNSILRKLCEGGRLRDANILLNEMSERKIE 376
Query: 547 PFPEPFVQYISKFGTVEDASEFLKA 571
P I+ + + D LK
Sbjct: 377 PDNVTCNTLINAYCKIGDMRSALKV 401
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 121/277 (43%), Gaps = 5/277 (1%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN ++ + + + +V + M+ G DI TY + F + M +AV+LF +
Sbjct: 243 TYNTLISLYCKKGMHYEALSVQDRMEMAGISPDIFTYNSLIYGFCREGRMREAVQLFRDI 302
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
D P+ + L+ +N+ D L R+ G + Y+ I R L + G
Sbjct: 303 KD--VTPNHVTYTSLIDGYCRVNDLDEAL--RLKEVMSEKGLYPTVITYNSILRKLCEGG 358
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
R +A ++ M EPDN+T + +I CK G A V D+M G D T+
Sbjct: 359 RLRDANILLNEMSERKIEPDNVTCNTLINAYCKIGDMRSALKVKDKMVGAGLKLDQFTYK 418
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
LI G C A E+D+A MM+ + L++ + Q+ KL E++ +
Sbjct: 419 ALIHGFCKAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRR 478
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L + ++ LI + +++ A +L LMK +
Sbjct: 479 -GLCVDVSVYRALIRRFCKIEKIDCAQRVLGLMKDKG 514
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 103/243 (42%), Gaps = 2/243 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY ++ R + + + E M ++G + TY I R+ + + DA L
Sbjct: 308 NHVTYTSLIDGYCRVNDLDEALRLKEVMSEKGLYPTVITYNSILRKLCEGGRLRDANILL 367
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + +P C+ L+ + I D+ +V +K G L + Y +
Sbjct: 368 NEMSERKIEPDNVTCNTLINAYCKIG--DMRSALKVKDKMVGAGLKLDQFTYKALIHGFC 425
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K D+A++++ M +AGF P TYS ++ CK E + DE+ G D+
Sbjct: 426 KAKEIDKAKELLFGMMDAGFSPSYCTYSWLVDSYCKQQNEEAVIKLPDELVRRGLCVDVS 485
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ LI+ C ++D A M +K D+ + L G+ +VN +L EM
Sbjct: 486 VYRALIRRFCKIEKIDCAQRVLGLMKDKGIFGDSVVYTSLAYGYWKVGKVNVTSDILDEM 545
Query: 505 IEK 507
+K
Sbjct: 546 YKK 548
>gi|357495705|ref|XP_003618141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355493156|gb|AES74359.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 846
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 27/334 (8%)
Query: 265 NTITYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
N ++Y+ + + L + D WN V ++M I Y+K+ M+E ++
Sbjct: 171 NVVSYDDVYKCLI--DCTEDCNWNPVI------FDMLIKAYVKLG-------MVEKGLET 215
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL 383
F ++G + P+V C+ LL +S IN +G + V + LG + ++ + L
Sbjct: 216 FWKNVEGSFVPNVVACNCLLNGLSKINY--IGECWEVYEEMGRLGIHRNGYTFNIMTHVL 273
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D+ ++ M+ GFEPD +TY+ +I G CK R EDA + M G +P++
Sbjct: 274 CREGDSDKVNGFLEKMEEEGFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNL 333
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ-KRVNGAYKLLV 502
+++ L+ G C ++ A F +M+++ D D + LI+G+ + ++ LL
Sbjct: 334 ISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQMCRSLLH 393
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY----ISK 558
EMI + +RP T + + + +L A+N++ +++ PE Y + K
Sbjct: 394 EMI-GIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGI-KIPENLYDYLLVALCK 451
Query: 559 FGTVEDASEFLKALSV-KEY-PSSAAYLQVFESF 590
G A FL +S +Y P + Y+++ ES
Sbjct: 452 EGRPFAARSFLIRISQDGDYVPEMSTYIKLAESL 485
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 121/513 (23%), Positives = 197/513 (38%), Gaps = 102/513 (19%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVN 141
+ + + + P L + VL + +D A FFNWV K R ++L L+N
Sbjct: 91 FQTQFKTILPHLGAHEISRVLIRTQSDASSALTFFNWV--KNDLR-----FTLSLQN--- 140
Query: 142 KDSLKQFWVTLRRMKEDHCYIEEETYLSILG---VLKKAKKASDLAALNQFHDGMVKEIA 198
+C I + ILG + +A K L L Q ++ V ++
Sbjct: 141 -----------------YCLI-----VHILGWNQIFDQAMKL--LCELIQLNN--VNVVS 174
Query: 199 MDNVAKTLVDVVLGSDWDD-----------KIG---KKLEDMKIELSDNFVLTVLKELRI 244
D+V K L+D +W+ K+G K LE + +FV V+ +
Sbjct: 175 YDDVYKCLIDCTEDCNWNPVIFDMLIKAYVKLGMVEKGLETFWKNVEGSFVPNVVACNCL 234
Query: 245 YPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+ L ++GE G N T+N + VL R +E+M++E
Sbjct: 235 --LNGLSKINYIGECWEVYEEMGRLGIHRNGYTFNIMTHVLCREGDSDKVNGFLEKMEEE 292
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G+E D+ TY + + K R +EDA L++ M P++ IS
Sbjct: 293 GFEPDLVTYNILINGYCKKRRLEDAFYLYKIMGIRGVVPNL---------IS-------- 335
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
Y + L K G+ EA ++ M G +PD ++Y+ +I
Sbjct: 336 --------------------YSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLI 375
Query: 416 FGLCKAGRFEDAC-NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
G CK G C ++L EM G PD T I+ QG+ ++ AL A++
Sbjct: 376 SGYCKEGGKMQMCRSLLHEMIGIGIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGI 435
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
+L D L+ + R A L+ + + P +T+ L E L +EEA+
Sbjct: 436 KIPENLYDYLLVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEAL 495
Query: 535 NLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE 567
L M K++ + IS V+ SE
Sbjct: 496 ILKSEMAKKSMKLNLTTYKAIISCLCRVKRTSE 528
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 39/240 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMED 319
G N I+Y+ ++ L + +++ + +M + G + D+ +Y IS ++ M+
Sbjct: 328 GVVPNLISYSALMNGLCKEGKIKEAHQLFNQMVQRGIDPDVVSYNTLISGYCKEGGKMQM 387
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
L M+ +P C ++ + + L + + + G + +++YD +
Sbjct: 388 CRSLLHEMIGIGIRPDNVTCRIVFQGYT--REGKLLSALNMVAELQRFGIKIPENLYDYL 445
Query: 380 HRALTKLGR------------------------------------FDEAEKMMKAMKNAG 403
AL K GR +EA + M
Sbjct: 446 LVALCKEGRPFAARSFLIRISQDGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKS 505
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
+ + TY +I LC+ R +A N+L+EM G +PD++ LI G+C N+VD+A+
Sbjct: 506 MKLNLTTYKAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAV 565
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 101/232 (43%), Gaps = 9/232 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY----IKISRQFQKFRM 316
G + + +T + + R + N+V E+++ G ++ + Y + + ++ + F
Sbjct: 399 GIRPDNVTCRIVFQGYTREGKLLSALNMVAELQRFGIKIPENLYDYLLVALCKEGRPFAA 458
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+++ + DG Y P + L S+ S NN + L+ + +S+ L+ + Y
Sbjct: 459 RSFLIRISQ---DGDYVPEMSTYIKLAESLCSFNNVEEALILKSEMAKKSM--KLNLTTY 513
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
I L ++ R EAE +++ M + G PD +I G C+ + A ++L +
Sbjct: 514 KAIISCLCRVKRTSEAENLLEEMVSLGILPDLEIKRALINGYCEENDVDKAVSLLKFFAK 573
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ D +++ +++ C V + K+++ Y ++ +I G
Sbjct: 574 EFQVYDTESYNAIVKVFCEVGNVAELMELQDKLVKIGYVPNSLTCKYVIRGL 625
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 182/411 (44%), Gaps = 16/411 (3%)
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWV--GE 258
++AK L +++ + +L+ + ++ VL+ L + A FF W +
Sbjct: 37 DLAKRLCKLIISCRKASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQK 96
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
G H +Y+ ++ LA+ + W+VV M+KEG +++T+ I R++ + + +
Sbjct: 97 RGGCAHTVRSYHTVVASLAKIRQYQLMWDVVAVMRKEGVA-NVETFSIIMRKYARAQKFD 155
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS--KSVY 376
+AV F M ++ + LL ++ N V + ++ + N S Y
Sbjct: 156 EAVYTFNIMERYGVAHNLAAFNSLLGALCKSKN-----VRKAQEIFDKMNNRFSPDAKTY 210
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + ++ M AG +PD +TY ++ LCK GR E+A V+ +M
Sbjct: 211 SILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSS 270
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
GC P +++L+ + ++ A+ F M + D + + L+ F K+ +
Sbjct: 271 RGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDN 330
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++++ +M E + P T+ ++ L+ + +EA + R M K+ P + + I
Sbjct: 331 AFRVMDDM-EGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKRCKPD-SDTYTMMI 388
Query: 557 SKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
F +E A + K + +K++ PS + + ++G +A LL
Sbjct: 389 KMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLL 439
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/463 (23%), Positives = 205/463 (44%), Gaps = 44/463 (9%)
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
+LI++C + +E++L+ ++T E VL +LDN A FF W +K+ + T
Sbjct: 44 KLIISCRKASAVEHELDHSGVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHT 103
Query: 131 V--YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
V Y ++ +L + W + M+++ ET+ I+ +A+K + A+
Sbjct: 104 VRSYHTVVASLAKIRQYQLMWDVVAVMRKEG-VANVETFSIIMRKYARAQKFDE--AVYT 160
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
F+ M + N+A + +LG+ K +K +++ ++++ F
Sbjct: 161 FNI-MERYGVAHNLAA--FNSLLGALCKSKNVRKAQEIFDKMNNRF-------------- 203
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
+ TY+ +L R ++ V +M G + DI TY +
Sbjct: 204 --------------SPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQPDIVTYGIMV 249
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN--KYES 366
K +E+AV + + M +P+ S+L+ + D+ + VA E
Sbjct: 250 DALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGV----DMRIEDAVATFLDMEK 305
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G VY+ + A K+ +FD A ++M M+ G P++ T++ ++ L G+ ++
Sbjct: 306 DGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDE 365
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V M + C PD T+T++I+ C ++++ AL + M K + VLIN
Sbjct: 366 AYRVFRNMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLIN 424
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
G + V+ A LL +MIEK +RP +TF L + LL R
Sbjct: 425 GLCDKGEVSQACVLLEDMIEK-GIRPPGSTFGKLRQLLLKEGR 466
>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
Length = 895
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 152/343 (44%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ L R +V + + EEM G D TY + K +++A L
Sbjct: 277 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALL 336
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M KP++ L+ + F + + S G +K +YD + R L
Sbjct: 337 DEMSCSGLKPNIVVYGTLVDGF--MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLC 394
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+G+ A K++K M G PD TY+ ++ G + + A +L+EM +G +P++
Sbjct: 395 KIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVY 454
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
++ I+I G C E A +M+ + +A + LI G + ++ A + L E
Sbjct: 455 SYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEAL-EK 513
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGT 561
+ K + P + +LI+ L R+EEA ++K+ P + I K G
Sbjct: 514 MTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGN 573
Query: 562 VEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+E A + L+ L+ P++ Y + E +F + + +L
Sbjct: 574 LEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSIL 616
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 146/339 (43%), Gaps = 9/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TY+G++ + ++ ++ +M G + + DTY + + K E
Sbjct: 553 GLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKV 612
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ KP +++R++S N + + F V + E G +Y +
Sbjct: 613 SSILQSMLGSGDKPDNHIYGIVIRNLSRSEN--MEVAFMVLTEVEKNGLVPDLHIYSSLI 670
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K+ ++A ++ M G EP + Y+ +I G C++G A NV D + G +
Sbjct: 671 SGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLV 730
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+T LI G+C ++ A + +M+++ DA + +VL G + A L
Sbjct: 731 PNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFL 790
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF- 559
EM R + F TL+ +L+E LL +M + P + + +S+F
Sbjct: 791 TEEMFN--RGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFG 848
Query: 560 --GTVEDASEFLKALSVKEYPSSAA--YLQVFESFFNEG 594
G + +A L K+ SA + +F N+G
Sbjct: 849 KAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMINKG 887
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 193/488 (39%), Gaps = 55/488 (11%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P + Y ++ L LK+ L M Y +++ G +K+ K A
Sbjct: 311 PDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDI 370
Query: 186 LNQFHDGMVK--EIAMDNVAKTLVDVV-LGSDWDDKIGKKLEDM-KIEL-SDNFVLTVLK 240
L + V+ +I DN+ + L + LG + K L++M K+ L D F L
Sbjct: 371 LKEMISAGVQPNKIMYDNLIRGLCKIGQLG-----RASKLLKEMIKVGLRPDTFTYNPLM 425
Query: 241 ELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE 298
+ G F + E +SG N +Y ++ L ++ ++ N++EEM EG +
Sbjct: 426 QGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLK 485
Query: 299 MDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF 358
+ Y + K E + L C L + + +PDL
Sbjct: 486 PNAFMYAPLIIGHSK----EGNISLA--------------CEALEKMTKANVHPDL---- 523
Query: 359 RVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
Y+ + + L+ +GR +EAE+ ++ G PD TYS +I G
Sbjct: 524 ---------------FCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGY 568
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
CK G E A +L +M +G P+ T+T L++G+ +N+ ++ M+ D
Sbjct: 569 CKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDN 628
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
+ ++I + + A+ +L E +EK L P + +LI L +E+A+ LL
Sbjct: 629 HIYGIVIRNLSRSENMEVAFMVLTE-VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLD 687
Query: 539 LMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEG 594
M K+ P + I F D S F L+ P+ Y + + G
Sbjct: 688 EMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNG 747
Query: 595 RHYEAKDL 602
+A DL
Sbjct: 748 DITDAFDL 755
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 144/343 (41%), Gaps = 21/343 (6%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
NG+L+ L R +++ W + M+ G D+ TY K R + A K+FE M
Sbjct: 212 NGLLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEM-- 269
Query: 330 GPYKPSVQDCSL-------LLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
+DC++ ++ + + F+ + G S Y +
Sbjct: 270 -----RRRDCAMNEVTYNVMISGLCRSGAVEEAFGFK--EEMVDYGLSPDAFTYGALMNG 322
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L K R EA+ ++ M +G +P+ + Y ++ G K G+ +A ++L EM G P+
Sbjct: 323 LCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPN 382
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ LI+G C ++ RA +M++ D + L+ G Q +GA++LL
Sbjct: 383 KIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLN 442
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKF 559
EM + P ++ +I L +EA NLL M + P P + SK
Sbjct: 443 EM-RNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKE 501
Query: 560 GTVEDASEFLKALS-VKEYPSSAAYLQVFESFFNEGRHYEAKD 601
G + A E L+ ++ +P Y + + GR EA++
Sbjct: 502 GNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEE 544
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 131/310 (42%), Gaps = 20/310 (6%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+DTY K + +A ++ M D P+ + C+ LL+ + + + L++++
Sbjct: 180 VDTYKKTGS-------VRNAAQVVLMMADLGLAPTRRCCNGLLKDL--LRADAMELLWKL 230
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
E G Y A K FD A+K+ + M+ + +TY+ +I GLC+
Sbjct: 231 KGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCR 290
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+G E+A +EM + G PD T+ L+ G C + + A +M + +
Sbjct: 291 SGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVV 350
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
L++GF+ + + A+ +L EMI ++P + + LI L +L A LL+ M
Sbjct: 351 YGTLVDGFMKEGKTAEAFDILKEMI-SAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409
Query: 541 KKQN-------YPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
K Y P + Q K G E +E + + P+ +Y +
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGIL---PNVYSYGIMINGLCQN 466
Query: 594 GRHYEAKDLL 603
G EA +LL
Sbjct: 467 GESKEAGNLL 476
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 99/244 (40%), Gaps = 5/244 (2%)
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ S S S +V D + K G A +++ M + G P + ++ L +A
Sbjct: 164 HRSRSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADA 223
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
E + ME G +PD+ T++ I+ HC A + D A F +M ++ + +V
Sbjct: 224 MELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV 283
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+I+G V A+ EM++ L P T+ L+ L RL+EA LL M
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVD-YGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCS 342
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEA 599
P + + F G +A + LK + S P+ Y + G+ A
Sbjct: 343 GLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRA 402
Query: 600 KDLL 603
LL
Sbjct: 403 SKLL 406
>gi|225457182|ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 161/387 (41%), Gaps = 8/387 (2%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
I + L+ K +LS N V KE R ++L F+++ K N Y ++ VL
Sbjct: 97 IARCLDVFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVL 156
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + + +EM G + ++ + + + + +++L + M PS+
Sbjct: 157 GREGLLEKCQEIFDEMPSHGVAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSI 216
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ ++ S + D + + + G Y+ + A + G DEAE +
Sbjct: 217 LTYNTVINSCAR-GGLDWEELLGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVF 275
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
+ M G PD TYS ++ K R E +L EME G PDI ++ +L++ H +
Sbjct: 276 RTMNEGGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQS 335
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ A+ F +M +A +L+N + R + L +EM + P AT
Sbjct: 336 GSIKEAMGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEM-KVSNTEPNAAT 394
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALS 573
+ LI +E + L M ++N P E + I K G EDA + L ++
Sbjct: 395 YNILINVFGEGGYFKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMN 454
Query: 574 VKE-YPSSAAYLQVFESFFNEGRHYEA 599
K PSS AY V E++ + EA
Sbjct: 455 EKGVVPSSKAYTGVIEAYGQAALYEEA 481
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 152/393 (38%), Gaps = 43/393 (10%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
LG F + H G + + +TYN +L AR + V M + G DI TY +
Sbjct: 237 LGLFAQM-RHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSYLVE 295
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLG 368
F K +E +L + M G P + ++LL + + + + VFR +
Sbjct: 296 TFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQMQGAGCVP 355
Query: 369 NSLSKSV----------YDGIHRALTKL----------------------GRFDEAEKMM 396
N+ + S+ YD + ++ G F E +
Sbjct: 356 NAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGYFKEVVTLF 415
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M EP+ TY +IF K G EDA +L M E G +P K +T +I+ + A
Sbjct: 416 HDMVEENVEPNMETYEGLIFACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQA 475
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ AL+ F M E + + LI F + +L++M + R + T
Sbjct: 476 ALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGLYKESEAILLKMGQSGVARN-RDT 534
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEF---LK 570
F +IE + EEA+ M+K P + +S + G VE++ E +K
Sbjct: 535 FNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIK 594
Query: 571 ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
AL + PS Y + + R +A LL
Sbjct: 595 ALGI--LPSVMCYCMMLAVYAKADRWDDAHQLL 625
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 90/466 (19%), Positives = 178/466 (38%), Gaps = 52/466 (11%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
T+ +V KL N EK S + F P T Y+++L S+K+ R
Sbjct: 289 TYSYLVETFGKL-NRLEKVSELLKEMESGGSF-PDITSYNVLLEAHAQSGSIKEAMGVFR 346
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
+M+ C TY +L + + + D+ L E+ + N
Sbjct: 347 QMQGAGCVPNAATYSILLNLYGRHGRYDDVRDL-------FLEMKVSNTEPNAA------ 393
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
+ N ++ V E + F V E+ + N TY G++
Sbjct: 394 -----------------TYNILINVFGEGGYFKEVVTLFHDMVEEN--VEPNMETYEGLI 434
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+ D ++ M ++G Y + + + + E+A+ F M + K
Sbjct: 435 FACGKGGLHEDAKKILLHMNEKGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSK 494
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVAN----KYESLGNSLSKSVYDGIHRALTKLGRF 389
P+V+ + L++ + G +++ + K G + ++ ++G+ A + G+F
Sbjct: 495 PTVETYNSLIQMFAK------GGLYKESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQF 548
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+EA K M+ A +PD T V+ C AG E++ E++ G +P + + ++
Sbjct: 549 EEAIKAYVEMEKARCDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMM 608
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+ + A+ D A +M ++ +I G + ++++ + EK++
Sbjct: 609 LAVYAKADRWDDAHQLLDEMFTNRVSNIHQVIGQMIRGDYDD---DSNWQMVEYVFEKLK 665
Query: 510 LRPWQAT---FKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ TL+E L + E A +L K+ FPE F
Sbjct: 666 SEGCSLGVRFYNTLLEALWWLGQKERATRVLNEATKRGL--FPELF 709
>gi|12324355|gb|AAG52147.1|AC022355_8 hypothetical protein; 57683-56685 [Arabidopsis thaliana]
Length = 332
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 121/290 (41%), Gaps = 38/290 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E + K + + YN I+ L + N+ EM +G D+ TY + F +
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
DA +L M++ R I NPD+ +
Sbjct: 128 TDAEQLLRDMIE--------------RQI----NPDV-------------------VTFS 150
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ AL K G+ EAE++ M G P ITY+ +I G CK R DA +LD M
Sbjct: 151 ALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASK 210
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PD+ T++ LI G+C A VD + F +M + A+ LI+GF ++ A
Sbjct: 211 SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 270
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
LL MI + P TF++++ L + L +A +L ++K P
Sbjct: 271 QDLLNVMISS-GVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCP 319
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y+ I L K G A+ + M + G PD ITYS +I C++GR+ DA +L +M
Sbjct: 78 IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDM 137
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E PD+ T++ LI +V A + M+ + + +I+GF Q R+
Sbjct: 138 IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
N A ++L M K P TF TLI A+R++ M + M ++ +
Sbjct: 198 NDAKRMLDSMASK-SCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 256
Query: 555 YISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
I F V D L+V A F+S
Sbjct: 257 LIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 90/201 (44%), Gaps = 4/201 (1%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y G+ + + GR+ +AE++++ M PD +T+S +I L K G+ +A + +M
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDML 173
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P T+ +I G C + ++ A M K+ D LING+ KRV+
Sbjct: 174 RRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVD 233
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
++ EM + + T+ TLI L+ A +LL +M P ++ +
Sbjct: 234 NGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAP---NYITF 289
Query: 556 ISKFGTVEDASEFLKALSVKE 576
S ++ E KA ++ E
Sbjct: 290 QSMLASLCSKKELRKAFAILE 310
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 100/232 (43%), Gaps = 5/232 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y I L K+G + A ++ M+ + + Y+ +I LCK G A N+ EM
Sbjct: 44 YGTIINGLCKMGDTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMH 103
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD+ T++ +I C + A M+E+ + D LIN + + +V+
Sbjct: 104 DKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVS 163
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A ++ +M+ + + P T+ ++I+ RL +A +L M ++ P F
Sbjct: 164 EAEEIYGDMLRR-GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTL 222
Query: 556 ISKFGT---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
I+ + V++ E + + ++ Y + F G A+DLL
Sbjct: 223 INGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLL 274
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 9/209 (4%)
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G PD +T++ ++ GLC GR A ++D M E G P + +I G C +
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+ AL +KM E + A + + +I+ A L EM +K + P T+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDK-GIFPDVITYS 115
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASE-FLKALSV 574
+I+ + R +A LLR M ++ P F + + K G V +A E + L
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+P++ Y + + F + R +AK +L
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +T++ ++ L + V + + +M + G TY + F K + DA ++
Sbjct: 145 DVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRML 204
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M P V S L+ D G+ +F ++ + N+++ Y +
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT---YTTLIHGF 261
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
++G D A+ ++ M ++G P+ IT+ ++ LC A +L++++++ P I
Sbjct: 262 CQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQKSEVCPRI 321
Query: 444 KTWTILIQ 451
IQ
Sbjct: 322 VQAKFKIQ 329
>gi|147797511|emb|CAN71434.1| hypothetical protein VITISV_010168 [Vitis vinifera]
Length = 814
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 108/491 (21%), Positives = 208/491 (42%), Gaps = 27/491 (5%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKL--DNDPEKASAFFNWVCDKKQFRPSSTVYSL 134
D + EL ++E+L +L ++ ++ + +KA F + K F P +VY
Sbjct: 245 DKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKSGFAPDVSVYDA 303
Query: 135 MLRNLVNKDSLKQFWVTLRRMKE--------------DHCYIEEETYLSILGVLKKAKKA 180
++ L K +++ L MKE +C E + Y I L+
Sbjct: 304 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTE 363
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD--KIGK--KLEDMKIELSDNFVL 236
+ L N +G+V ++D A L+ + G ++ D ++ K +++M + +F +
Sbjct: 364 AMLLLYNSVLNGLVNGKSVDK-AYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSI 422
Query: 237 TVLKELRIYPVK-ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+ + AL FR + G K N + YN ++ L+ + + + +++EMK
Sbjct: 423 VIDGLCNTGKLDLALSLFRDM-VRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 481
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G+ T+ I + + A+ + M ++P ++ +LL++ +
Sbjct: 482 GFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEA 541
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
F E + Y K+ D+A ++ + + G+ PD + Y+ +I
Sbjct: 542 CNFLAEMVREGFLPDI--VAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 599
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G CK R +A ++LDEM G +P + T+ +LI G C ++D+A C ++M+ K +
Sbjct: 600 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 659
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ LI+G + R + A L EM K P + +F LI L + A+
Sbjct: 660 PNVITYTTLIDGLCNAGRPDDAIHLWNEMRGK-GCSPNRISFIALIHGLCKCGWPDAALL 718
Query: 536 LLRLMKKQNYP 546
R M ++ P
Sbjct: 719 YFREMGERETP 729
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 163/741 (21%), Positives = 279/741 (37%), Gaps = 184/741 (24%)
Query: 24 STRPL--FTRVTHFFHIS-SFTASNQSHTSQFHINTCQK--IFFSTSPNSSLELILACDW 78
STRP+ + FF+ S N S SQF C K FS+ + + L +
Sbjct: 15 STRPISQVPLIQLFFYTQKSLFTQNLSTFSQFLRLICTKSSASFSSPHGAHITNALISIF 74
Query: 79 SDELEN----KLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVY-- 132
+ + N +L LTHE V VL L + + A FFNW D+ F + Y
Sbjct: 75 TKQPFNPDNQELRNFGSMLTHEVVENVLSGLKS-WKIAYRFFNWASDQGGFNHNCYTYNA 133
Query: 133 --------------SLMLRNLVNK---------------DSLKQFWVTLRRMKEDHCYIE 163
SL+ ++VN S+ + L+ M + +
Sbjct: 134 MASCLSHARQNAPLSLLSMDIVNSRCAMSPGALGAISKSGSIDLVEMRLKEMCDSGWEPD 193
Query: 164 EETYLSILGVLKKAKKASD-LAALNQFH-----DGMVKEIAMDNVAKTL-VDVVLGSDWD 216
+ T S+L ++K L+ N+ + DG V I + +K VD
Sbjct: 194 KYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAF----- 248
Query: 217 DKIGKKLEDMKIELSD-NFVLTVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILR 274
++ +++ED+ I L++ F + + +R V KAL F+ + + SG+ + Y+ ++
Sbjct: 249 -ELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKSGFAPDVSVYDALIG 306
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI----SRQFQKFRMMEDAVKLFE----- 325
L + + +++ EMK+ G + DI K+ S + +R++E+ ++ +
Sbjct: 307 GLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIPYCSEEVDIYRLIEERLEDLDTEAML 366
Query: 326 ----------------------------------------FMMDGPYKPSVQDCSLLLRS 345
FM+ +P S+++
Sbjct: 367 LLYNSVLNGLVNGKSVDKAYYLLXAMTGDNYTDNFEVNKFFMVKEMVRPXTTSFSIVIDG 426
Query: 346 ISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
+ + DL L +FR + N L +Y+ + L+ R +E ++K MK +GF
Sbjct: 427 LCNTGKLDLALSLFRDMVRVGCKQNVL---LYNNLIDKLSNSNRLEECYLLLKEMKGSGF 483
Query: 405 EPDNITYSQVIFG------------------------------------LCKAGRFEDAC 428
P T++ IFG LCK R +AC
Sbjct: 484 RPTQFTHNS-IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEAC 542
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
N L EM G +PDI ++ I G VD+AL F + + Y D + LINGF
Sbjct: 543 NFLAEMVREGFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGF 602
Query: 489 LSQKRVNGAYKLLVEMIEKVRL----------------------------------RPWQ 514
KRV+ A+ +L EM+ K + P
Sbjct: 603 CKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNV 662
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKA 571
T+ TLI+ L A R ++A++L M+ + P F+ I K G + A + +
Sbjct: 663 ITYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFRE 722
Query: 572 LSVKEYPSSAAYLQVFESFFN 592
+ +E P + Y+ + SF +
Sbjct: 723 MGERETPDTIVYVALITSFIS 743
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 30/278 (10%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L +++E+R++ G W+ KH T+ +++ L + + + N + EM +E
Sbjct: 507 LDMVREMRVH-----GHEPWI------KHYTL----LVKQLCKRKRSAEACNFLAEMVRE 551
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G+ DI Y F K + ++ A+++F + Y P V + L+ +
Sbjct: 552 GFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVK----- 606
Query: 356 LVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
RV+ ++ L ++K + Y+ + K G D+A + M EP+ I
Sbjct: 607 ---RVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVI 663
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I GLC AGR +DA ++ +EM GC P+ ++ LI G C D ALL F +M
Sbjct: 664 TYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM 723
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
E+ D + LI F+S K A+++L EM+ K
Sbjct: 724 GERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAK 760
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/421 (21%), Positives = 188/421 (44%), Gaps = 18/421 (4%)
Query: 193 MVKEIAMD--NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
M +I++D +++K L +++ + +L+ + ++ +VLK L + A
Sbjct: 29 MACDISVDASDLSKRLCKLIISCRKASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAY 88
Query: 251 GFFRWVGEH--SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
FF W + H +Y+ ++ LA+ + W+VV M+KEG +++T+ I
Sbjct: 89 RFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQLMWDVVAIMRKEGVA-NVETFGIIM 147
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
R++ + + +++AV F M ++ + LL ++ N V + ++ +
Sbjct: 148 RKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLLSALCKSKN-----VRKAQEIFDKMN 202
Query: 369 NSLS--KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
N S Y + + + ++ M AG +PD +TY ++ LCK GR E+
Sbjct: 203 NRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMVDALCKTGRVEE 262
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A V+ +M GC P ++IL+ + ++ A+ F M + D + + LI
Sbjct: 263 AVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAFLDMEKDGIMPDVVVYNALIT 322
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
F K+ A++++ +M + + P T+ ++ L+ + +EA + R M K+ P
Sbjct: 323 AFCKVKKFENAFRVMDDM-QGHGISPNSRTWNIILNTLISLGKDDEAYRVFRSMIKRCKP 381
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + I F +E A + K + +K++ PS + + ++G +A L
Sbjct: 382 D-SDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVL 440
Query: 603 L 603
L
Sbjct: 441 L 441
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 204/467 (43%), Gaps = 52/467 (11%)
Query: 71 ELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSST 130
+LI++C + LE++L+ ++T E VL+ LDN A FF W +K+ + T
Sbjct: 46 KLIISCRKASALEHELDHSGVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHT 105
Query: 131 V--YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ 188
V Y ++ +L + W + M+++ ET+ I+ +A+K + A+
Sbjct: 106 VRSYHTVVTSLAKIRQYQLMWDVVAIMRKEG-VANVETFGIIMRKYARAQKLDE--AVYT 162
Query: 189 FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK 248
F + M K N+A + +L + K +K +++ ++++ F
Sbjct: 163 F-NVMEKYGVAHNLAA--FNSLLSALCKSKNVRKAQEIFDKMNNRF-------------- 205
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
+ TY+ +L R S+ V +M G + DI TY +
Sbjct: 206 --------------SPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQPDIVTYGIMV 251
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
K +E+AV + + M +P+ S+L+ + G+ R+ + +
Sbjct: 252 DALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHT--------YGVDMRIEDAVAAFL 303
Query: 368 -----GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
G VY+ + A K+ +F+ A ++M M+ G P++ T++ ++ L G
Sbjct: 304 DMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISLG 363
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
+ ++A V M + C PD T+T++I+ C ++++ AL + M K +
Sbjct: 364 KDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTFS 422
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
VLING + V+ A LL +MIEK +RP +TF L + LL R
Sbjct: 423 VLINGLCDKGEVSQACVLLEDMIEK-GIRPPGSTFGKLRQLLLKEGR 468
>gi|255584310|ref|XP_002532891.1| hypothetical protein RCOM_0447050 [Ricinus communis]
gi|223527351|gb|EEF29496.1| hypothetical protein RCOM_0447050 [Ricinus communis]
Length = 375
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 68/98 (69%)
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+A+ LL LMK PPF PF++++SK GT +DA F++A++ K++PS++ L++FE+FF
Sbjct: 261 DALKLLDLMKDHGNPPFLTPFIKHVSKRGTGDDAIVFMRAMTTKKFPSTSVVLRLFEAFF 320
Query: 592 NEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVT 629
GRH EA+ L KCPH+IR + + LF S K+ K T
Sbjct: 321 KAGRHSEAQIFLSKCPHYIRNHADVLNLFYSMKAGKDT 358
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 104/237 (43%), Gaps = 29/237 (12%)
Query: 213 SDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGI 272
SD +D I K LE + + VL VL L P A FF WV E + ++ YN +
Sbjct: 99 SDVND-ITKDLELNNVVVDHELVLKVLNFLECNPDVARKFFDWVLEKDSERLSSKAYNLM 157
Query: 273 LRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY 332
L+VL + V +FW++VE MKK+GY + T K++ +F+K + D KL E G
Sbjct: 158 LKVLGFNGFVEEFWDLVEIMKKKGYGVSRGTRDKVAEKFEKDGLKSDLEKLKEVFASGSV 217
Query: 333 KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRAL--------- 383
S++ +L + I + N G V + + L N++ S DG AL
Sbjct: 218 DHSLEKIALRMSRI--VRNQVWGE--DVEKQIKDL-NAVFSSDMDGFTDALKLLDLMKDH 272
Query: 384 -------------TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+K G D+A M+AM F P ++ KAGR +A
Sbjct: 273 GNPPFLTPFIKHVSKRGTGDDAIVFMRAMTTKKF-PSTSVVLRLFEAFFKAGRHSEA 328
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)
Query: 95 HESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRR 154
HE V+ VL L+ +P+ A FF+WV +K R SS Y+LML+ L +++FW +
Sbjct: 117 HELVLKVLNFLECNPDVARKFFDWVLEKDSERLSSKAYNLMLKVLGFNGFVEEFWDLVEI 176
Query: 155 MKEDHCYIEEETYLSILGVLKKAKKASDLAALNQ-FHDGMVKEIAMDNVAKTLVDVVLGS 213
MK+ + T + +K SDL L + F G V +++ +A + +V
Sbjct: 177 MKKKGYGVSRGTRDKVAEKFEKDGLKSDLEKLKEVFASGSVDH-SLEKIALRMSRIVRNQ 235
Query: 214 DWDDKIGKKLEDMKIELSDN 233
W + + K+++D+ S +
Sbjct: 236 VWGEDVEKQIKDLNAVFSSD 255
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 146/362 (40%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S K N + Y+ I+ L + D N+ EM+ +G +I TY
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F A +L + M++ P+V
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNV------------------------------ 323
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EA ++ M G P+ ITY+ +I G CK R +
Sbjct: 324 -------VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC PD+ T+T LI G+C A +D + +M + A+ + LI+
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A L +MI + P T TL++ L +L++A+ + + M+K
Sbjct: 437 GFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK---- 491
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
SK DAS + P Y + NEG+ EA++L +
Sbjct: 492 ----------SKMDL--DASHPFNGVE----PDVLTYNILICGLINEGKFLEAEELYEEM 535
Query: 607 PH 608
PH
Sbjct: 536 PH 537
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 124/293 (42%), Gaps = 14/293 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+ ++ + + D ++ EM + G + TY + F + A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
+ L + M+ P + C+ LL + +N L + + L S
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505
Query: 375 -----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ M P++ T+ LI G+C A VD L F +M + ADA + LI GF
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+NGA + EMI + P T + ++ LE A+ +L +++
Sbjct: 626 KVGNINGALDIFQEMISS-GVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 10/302 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ + + +EDA+ LF M+ PSV D + L+ ++ + PDL V + K
Sbjct: 50 LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDL--VISLYQKM 107
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + A + G PD +T++ ++ GLC R
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRV 167
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A ++ ++ C PD+ T+T L+ G C V A+ +M+E D
Sbjct: 168 SEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E ++P + +I+ L R ++ NL M+ +
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P + I F G A L+ L K P+ Y + +F EG+ +EA
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 601 DL 602
+L
Sbjct: 344 EL 345
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K+G A +++ M+ + +P+ + YS +I GLCK GR D+ N+ EM++ G
Sbjct: 226 GMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIF 285
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ +I G C + A +M+E+ + + LIN F+ + + A +L
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM+ + + P T+ ++I+ RL+ A ++ LM + P F I +
Sbjct: 346 YDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 404
Query: 561 T---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
++D E L + + ++ Y + F G A DL
Sbjct: 405 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 37/204 (18%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + +TYN ++ L + + EEM G D TY + K +++
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M + P+V + L+ N Y
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLI------------------NGY--------------- 589
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G D I Y +I+G K G A ++ EM +G
Sbjct: 590 ----CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 645
Query: 440 IPDIKTWTILIQGHCAANEVDRAL 463
PD T ++ G + E++RA+
Sbjct: 646 YPDTITIRNMLTGFWSKEELERAV 669
>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 695
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 170/389 (43%), Gaps = 17/389 (4%)
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHES 281
KLE + ++LS++ ++ K P KA+ F V + SG T T ++ L
Sbjct: 251 KLE-LDVQLSNDIIVGFAKAGD--PNKAMEFLGMV-QASGLSPRTATLIAVISALGDSGR 306
Query: 282 VRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSL 341
+ + + EEMK G + Y + + + K M++DA + M P SL
Sbjct: 307 IIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSL 366
Query: 342 LLRSISSINNPDLGLVFRVANKYESLGNSLSKS-VYDGIHRALTKLGRFDEAEKMMKAMK 400
L+ + S+ + R+ K N + S V+ I + G + ++ +++K MK
Sbjct: 367 LIDAYSNAGRWESA---RIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
N+G PD Y+ +I K + A + D+M G PD TW LI HC A +
Sbjct: 424 NSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHE 483
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
RA F +MMEK + +++IN F Q+R + L+ M + L P T+ TL
Sbjct: 484 RAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNM-RSLGLLPNVVTYTTL 542
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVE---DASEFLKALSV 574
I+ + R +A+ L MK P + I+ + G E +A ++A S+
Sbjct: 543 IDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSL 602
Query: 575 KEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K PS A + +F + R EA +L
Sbjct: 603 K--PSLLALNSLINAFGEDRRDAEAFSVL 629
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 115/259 (44%), Gaps = 14/259 (5%)
Query: 274 RVLARHESVRDFWN----VVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
R+LA + R W V++EMK G D Y + F KF ++ A+ F+ M+
Sbjct: 401 RILASYRD-RGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLS 459
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALTKL 386
+P + L+ L R +E + G S + ++ + + +
Sbjct: 460 EGIQPDTVTWNTLIDCHCKAE-----LHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQ 514
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
R+D+ + +M M++ G P+ +TY+ +I K+GRF DA L++M+ G P +
Sbjct: 515 ERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMY 574
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
LI + ++A+ F M + L+ LIN F +R A+ +L M E
Sbjct: 575 NALINAYAQKGLSEQAVNAFRLMRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKE 634
Query: 507 KVRLRPWQATFKTLIEKLL 525
L+P T+ TL++ L+
Sbjct: 635 N-DLKPDVVTYTTLMKALI 652
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 125/544 (22%), Positives = 212/544 (38%), Gaps = 102/544 (18%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ-FRPSSTV-YSLMLRNL 139
L ++ + LSP LT+ +++ + +ND EKA N + +Q PS V YSL++++L
Sbjct: 175 LLSQQQALSP-LTYNALINACAR-NNDLEKA---INLISRMRQDGYPSDFVNYSLIIQSL 229
Query: 140 VNKDSLKQFWVTLRRMKEDHC-YIEEETYLS---ILGVLKKAKKASDLAALNQFHDGMVK 195
V + + + + E C +E + LS I+G K + L GMV+
Sbjct: 230 VRSNRIDS-PILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFL-----GMVQ 283
Query: 196 EIAMDNVAKTLVDVV--LGSDWDDKIGKKLEDMKI--ELSDNFVLTVLKELRIYPVKALG 251
+ TL+ V+ LG G+ +E I E+ DN
Sbjct: 284 ASGLSPRTATLIAVISALGDS-----GRIIEAEAIFEEMKDN------------------ 320
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
G K T YNG+L+ + ++D +V EM++ G D TY + +
Sbjct: 321 ---------GLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAY 371
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
E A + + M P+ S +L S + + F+V + ++ G
Sbjct: 372 SNAGRWESARIVLKEMEANNIMPNSYVFSRILASYR--DRGEWQKSFQVLKEMKNSGVRP 429
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y+ + K D A M + G +PD +T++ +I CKA E A +
Sbjct: 430 DRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELF 489
Query: 432 DEMEENG---CI--------------------------------PDIKTWTILIQGHCAA 456
+EM E G C+ P++ T+T LI + +
Sbjct: 490 EEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKS 549
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGF----LSQKRVNGAYKLLVEMIEKVRLRP 512
A+ C M + + + LIN + LS++ VN A++L+ L+P
Sbjct: 550 GRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVN-AFRLM----RADSLKP 604
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKAL 572
+LI RR EA ++L+ MK+ + P V Y + + +F K
Sbjct: 605 SLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKP---DVVTYTTLMKALIRVDKFNKVP 661
Query: 573 SVKE 576
SV E
Sbjct: 662 SVYE 665
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/341 (19%), Positives = 134/341 (39%), Gaps = 40/341 (11%)
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+TYN ++ AR+ + N++ M+++GY D Y
Sbjct: 185 LTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNY---------------------- 222
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
SL+++S+ N D ++ ++ ++ + L + + I K
Sbjct: 223 -------------SLIIQSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKA 269
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G ++A + + ++ +G P T VI L +GR +A + +EM++NG P + +
Sbjct: 270 GDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAY 329
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
L++G+ A + A ++M D +LI+ + + R A +L EM E
Sbjct: 330 NGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEM-E 388
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVE 563
+ P F ++ +++ +L+ MK P F + KF ++
Sbjct: 389 ANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLD 448
Query: 564 DASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
A + F K LS P + + + + H A++L
Sbjct: 449 HAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEELF 489
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 97/248 (39%), Gaps = 2/248 (0%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++SG + + YN ++ + + + ++M EG + D T+ + K +
Sbjct: 423 KNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELH 482
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E A +LFE MM+ + P V ++++ S D V + SLG + Y
Sbjct: 483 ERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDD--VKTLMGNMRSLGLLPNVVTYT 540
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K GRF +A + ++ MK+AG +P + Y+ +I + G E A N M +
Sbjct: 541 TLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRAD 600
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
P + LI A M E + D L+ + + N
Sbjct: 601 SLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKV 660
Query: 498 YKLLVEMI 505
+ EMI
Sbjct: 661 PSVYEEMI 668
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 8/192 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ T+N ++ E D ++ M+ G ++ TY + + K DA
Sbjct: 496 GFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYGKSGRFSDA 555
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSVY--D 377
++ E M KPS + L+ + + GL + N + + +SL S+ +
Sbjct: 556 IECLEDMKSAGLKPSSTMYNALINAYAQ-----KGLSEQAVNAFRLMRADSLKPSLLALN 610
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ A + R EA ++K MK +PD +TY+ ++ L + +F +V +EM
Sbjct: 611 SLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEMILA 670
Query: 438 GCIPDIKTWTIL 449
GC PD K +L
Sbjct: 671 GCTPDRKARAML 682
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 209/498 (41%), Gaps = 74/498 (14%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
A+ F++ + ++ P+ + ++++ + + LR M + C Y +++
Sbjct: 202 ANVFYDML--SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 172 GVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI---GKKLEDM 226
L K + ++ L F G V + A+T DV+LG D+I K + M
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPD------AETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 227 KI------ELSDNFVLTVLKEL-RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
I +++ +++ L ++ R+ K L F+R K + +N ++ H
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDL-FYRIP------KPEIVIFNTLIHGFVTH 366
Query: 280 ESVRDFWNVVEEMKKE-GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ D V+ +M G D+ TY + + K ++ A+++ M + KP+V
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
++L+ DG KLG+ DEA ++
Sbjct: 427 YTILV---------------------------------DG----FCKLGKIDEAYNVLNE 449
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G +P+ + ++ +I CK R +A + EM GC PD+ T+ LI G C +E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW-QATF 517
+ AL M+ + A+ + LIN FL + + A KL+ EM+ + P + T+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITY 567
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSV 574
+LI+ L A +++A +L M + + P + + + G VE+A EF K + +
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 575 KEYPSSAAYLQVFESFFN 592
+ S + F S N
Sbjct: 628 R---GSTPDIVTFNSLIN 642
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 173/415 (41%), Gaps = 48/415 (11%)
Query: 234 FVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
F L L EL + ++ F W G +GY+H+ Y ++ L + + ++ +MK
Sbjct: 79 FQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMK 138
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPY--KPSVQDCSLLLRSISSINN 351
EG +I I R + K +L M Y +P+ + +++L + S
Sbjct: 139 DEGIVFKESLFISIMRDYDKAGFPGQTTRLM-LEMRNVYSCEPTFKSYNVVLEILVS--- 194
Query: 352 PDLGLVFRVANK--YESLGNSLSKSVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G +VA Y+ L + +++ + +A + D A +++ M G P+
Sbjct: 195 ---GNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPN 251
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
++ Y +I L K R +A +L+EM GC+PD +T+ +I G C + ++ A
Sbjct: 252 SVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVN 311
Query: 468 KMMEKNY--------------------DADADL-----------LDVLINGFLSQKRVNG 496
+M+ + + DA DL + LI+GF++ R++
Sbjct: 312 RMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDD 371
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A +L +M+ + P T+ +LI + A+ +L M+ + P + V
Sbjct: 372 AKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILV 431
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYKCP 607
K G +++A L +S P++ + + +F E R EA ++ + P
Sbjct: 432 DGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K NT+ +N ++ + + + + EM ++G + D+ T+ + + ++ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M+ + + L+ + + ++ ++ N+ G+ L + Y+ +
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAF--LRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L + G D+A + + M G P NI+ + +I GLC++G E+A EM G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C A ++ L F K+ + D + L++ V A L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 501 LVEMIEKVRL---RPWQATFKTLI-EKLLGARRLEEA 533
L E IE + R W +++I ++ L RR A
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNA 728
>gi|356512321|ref|XP_003524868.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 733
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHS 260
N+ T+ ++ W ++ + + E + V VL P AL F+RWV
Sbjct: 55 NLELTICKMMSNRAWTTRLQNSIRSLVPEFDPSLVYNVLHGA-ASPEHALQFYRWVERAG 113
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE---MDIDTYIKISRQFQKFRMM 317
+ H T I+++L R+ + ++ + G + D ++ + + + ++
Sbjct: 114 LFTHTPETTLKIVQILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIV 173
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+++VKLF+ K + LG + YD
Sbjct: 174 QESVKLFK-------------------------------------KMKELGLDRTVKSYD 196
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + + GR+ A++ AM G +P T++ +++G+ + R + A ++M+
Sbjct: 197 ALFKVILRRGRYMMAKRYYNAMLLEGVDPTRHTFNILLWGMFLSLRLDTAVRFYEDMKSR 256
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD+ T+ LI G+ +VD A F +M ++ + ++ G+++ R++ A
Sbjct: 257 GILPDVVTYNTLINGYFRFKKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGRIDDA 316
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQYI 556
K+ EM + ++P TF TL+ L A ++ EA ++L M ++ P F++ +
Sbjct: 317 LKVFEEM-KGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNALFMKMM 375
Query: 557 S---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLLYK 605
S K G ++ A++ LKA+ P+ A + V ESF + +A+ LL K
Sbjct: 376 SCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDK 428
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 118/541 (21%), Positives = 215/541 (39%), Gaps = 86/541 (15%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR--PSSTVYSLM 135
W+ L+N + L P+ S+VY + PE A F+ WV F P +T+ +
Sbjct: 69 WTTRLQNSIRSLVPEF-DPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTLKIVQ 127
Query: 136 LRNLVNK-DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMV 194
+ +K + + R + E+ ++S++ +A + L + +
Sbjct: 128 ILGRYSKLNHARCILFNDTRGGVSRAAVTEDAFVSLIDSYGRAGIVQESVKLFK----KM 183
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
KE+ +D K+ +D L + ++ + +L E + P +
Sbjct: 184 KELGLDRTVKS---------YDALFKVILRRGRYMMAKRYYNAMLLE-GVDPTR------ 227
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ N + + L + R ++ F+ E+MK G D+ TY + + +F
Sbjct: 228 -------HTFNILLWGMFLSL--RLDTAVRFY---EDMKSRGILPDVVTYNTLINGYFRF 275
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ +++A KLF M P+V + +L+ +
Sbjct: 276 KKVDEAEKLFVEMKGRDIVPNVISFTTMLKGYVAA------------------------- 310
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
GR D+A K+ + MK G +P+ +T+S ++ GLC A + +A +VL EM
Sbjct: 311 ------------GRIDDALKVFEEMKGCGVKPNVVTFSTLLPGLCDAEKMAEARDVLGEM 358
Query: 435 EENGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
E P D + ++ C A ++D A M+ + +A VLI F
Sbjct: 359 VERYIAPKDNALFMKMMSCQCKAGDLDAAADVLKAMVRLSIPTEAGHYGVLIESFCKANV 418
Query: 494 VNGAYKLLVEMIEK-VRLRPWQ------ATFKTLIEKLLGARRLEEAMNLLR-LMKK--Q 543
+ A KLL ++IEK + LRP + + +I L R +A R L+KK Q
Sbjct: 419 YDKAEKLLDKLIEKEIVLRPQNDSEMEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKGVQ 478
Query: 544 NYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSA-AYLQVFESFFNEGRHYEAKDL 602
+ F ++ SK G + A E +K + + +Y + ES+ +G +AK
Sbjct: 479 DSVAF-NNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTA 537
Query: 603 L 603
L
Sbjct: 538 L 538
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/268 (19%), Positives = 110/268 (41%), Gaps = 42/268 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA FFR + + +++ +N ++R ++ + + +++ M + G D+D+Y +
Sbjct: 464 KAETFFRQLLKKG--VQDSVAFNNLIRGHSKEGNPDSAFEIMKIMGRRGVARDVDSYRLL 521
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ + DA + M++ + P SL
Sbjct: 522 IESYLRKGEPADAKTALDGMLESGHLPE-----------------------------SSL 552
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
S+ +S++D GR A ++MK+M G + + +++ L G E+A
Sbjct: 553 YRSVMESLFDD--------GRVQTASRVMKSMVEKGAKENMDLVLKILEALLLRGHVEEA 604
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+D + NGC PD + L+ C + AL ++E++ D + D +++
Sbjct: 605 LGRIDLLMHNGCEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDA 661
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
L+ + AY +L +++EK W +
Sbjct: 662 LLAAGKTLNAYSILCKILEKGGSTDWSS 689
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 65/300 (21%), Positives = 120/300 (40%), Gaps = 21/300 (7%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT--YIKISRQFQKFRMME 318
G K N +T++ +L L E + + +V+ EM E Y D ++K+ K ++
Sbjct: 327 GVKPNVVTFSTLLPGLCDAEKMAEARDVLGEMV-ERYIAPKDNALFMKMMSCQCKAGDLD 385
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-----------LVFRVANKYESL 367
A + + M+ +L+ S N D +V R N E
Sbjct: 386 AAADVLKAMVRLSIPTEAGHYGVLIESFCKANVYDKAEKLLDKLIEKEIVLRPQNDSE-- 443
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
+ S Y+ + L + GR +AE + + G + D++ ++ +I G K G + A
Sbjct: 444 ---MEPSAYNLMIGYLCEHGRTGKAETFFRQLLKKGVQ-DSVAFNNLIRGHSKEGNPDSA 499
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++ M G D+ ++ +LI+ + E A M+E + ++ L ++
Sbjct: 500 FEIMKIMGRRGVARDVDSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMES 559
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
RV A +++ M+EK K L E LL +EEA+ + L+ P
Sbjct: 560 LFDDGRVQTASRVMKSMVEKGAKENMDLVLKIL-EALLLRGHVEEALGRIDLLMHNGCEP 618
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 148/343 (43%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T+N +L L + + + N+ +E+ +G ++ +Y I + + A K++
Sbjct: 248 NVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVY 307
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M+D + P+ ++L+ D+ F + ++ + + + I + L
Sbjct: 308 KEMLDNGFTPNAVTFTILMDGY--FKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLC 365
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GR E + + GF P + Y+ +I G K G A NV EM E G P
Sbjct: 366 KAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTV 425
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G C N +D AL M K D LI+GF ++ + A++LL E+
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGT 561
L P + + ++I +EEA++L + M + P + + I K G
Sbjct: 486 -RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 544
Query: 562 VEDASEF-LKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ AS+ + LS P A+ + N+G+ A+ +L
Sbjct: 545 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 587
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 88/417 (21%), Positives = 175/417 (41%), Gaps = 45/417 (10%)
Query: 75 ACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSL 134
AC+ DE+ K +SP + + + + ++ A + + D F P++ +++
Sbjct: 268 ACNLWDEVIAK--GISPNVVSYNNIILGHCRKDNINAACKVYKEMLDN-GFTPNAVTFTI 324
Query: 135 MLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL--GVLKKAKKASDLAALNQFHDG 192
++ K ++ + RMK D + +T L I+ G+ K + N+F
Sbjct: 325 LMDGYFKKGDIENAFSIFHRMK-DANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKF--- 380
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGF 252
V++ V + ++ I +++ I L+ N V + E+ I P
Sbjct: 381 ---------VSQGFVPTCM--PYNTIIDGFIKEGNINLASN-VYREMCEVGITP------ 422
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
+T+TY ++ + ++ ++ +MK++G +MDI Y + F
Sbjct: 423 ------------STVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470
Query: 313 KFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNS 370
K R M+ A +L + P+ + ++ ++NN + + L ++ N+ G
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE----GIP 526
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y + L K GR A + M + G PD+ ++ +I GLC G+FE+A +
Sbjct: 527 CDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKI 586
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
L++M IP + + LI GH + A +M+++ D D+L+NG
Sbjct: 587 LEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 84/185 (45%), Gaps = 2/185 (1%)
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
P+ G + + + G + + + A K G EA ++ M N G +
Sbjct: 89 PNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVA 148
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ G C G A +++E+ E+G +P+ T+++LI G C +++A +++M
Sbjct: 149 TSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKT 208
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K + L+ ++ G+L + A+ + + +E + TF TL+ L ++
Sbjct: 209 KGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVF--TFNTLLSWLCKEGKMN 266
Query: 532 EAMNL 536
EA NL
Sbjct: 267 EACNL 271
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 65/163 (39%), Gaps = 1/163 (0%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RA K G EAE+ K G E D YS + LC A ++L EM G I
Sbjct: 48 RACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWI 107
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P T+T +I V AL M+ + + L+ G+ Q + A +
Sbjct: 108 PPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSAL-V 166
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LV I + L P + T+ LI+ +E+A MK +
Sbjct: 167 LVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTK 209
>gi|15228903|ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16890, mitochondrial; AltName: Full=Protein
PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
gi|7670019|dbj|BAA94973.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332642359|gb|AEE75880.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 659
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/471 (23%), Positives = 202/471 (42%), Gaps = 63/471 (13%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETY-LSILGVLKKAKKASDLA 184
+PS+ +Y+ ++ LV +SL ++ ++M+ D C + TY + I GV KK +
Sbjct: 177 KPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIR 236
Query: 185 ALNQFHDGMVKEIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDMKI-ELSDN------FV 235
+ Q M +E NV L+D L + D+ K+LE M++ +L+ N FV
Sbjct: 237 LVKQ----MEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+ + L P KA E + Y+ +L L+ + ++ + ++ +
Sbjct: 293 HGIFRCLP--PCKAFEVLVGFMEKDS-NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGER 349
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
GY D T+ K + + ++F+ + KP +L++++ +
Sbjct: 350 GYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQR---- 405
Query: 356 LVFRVANKY-ESLG-NSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNA--------- 402
F ++Y + +G + L SV Y+ + L K R + A + M++
Sbjct: 406 --FSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTF 463
Query: 403 --------------------------GFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
GF+PD IT+S +I LC+A +DA + EM E
Sbjct: 464 NTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLE 523
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P+ T+ ILI+ C+ + DR++ FAKM E D + I F ++V
Sbjct: 524 WGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKK 583
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +LL M+ ++ L+P T+ TLI+ L + R EA + +++ P
Sbjct: 584 AEELLKTML-RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVP 633
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 144/322 (44%), Gaps = 15/322 (4%)
Query: 132 YSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHD 191
Y +L L N K+ LR++ E + T+ + + L K DL + D
Sbjct: 323 YDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGH---DLVETCRIFD 379
Query: 192 GMVKEIAMD--NVAKTLVDVVLGSDWDDKIGKKLEDMKIE------LSDNFVLTVLKELR 243
G V N LV +L + + + L+ M ++ S N V+ L + R
Sbjct: 380 GFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKAR 439
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
++ F + G N +T+N L + V+ V+E++ G++ D+ T
Sbjct: 440 --RIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVIT 497
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ I + + ++DA F+ M++ +P+ ++L+RS S + D + ++ K
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSV--KLFAK 555
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
+ G S Y+ ++ K+ + +AE+++K M G +PDN TYS +I L ++GR
Sbjct: 556 MKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGR 615
Query: 424 FEDACNVLDEMEENGCIPDIKT 445
+A + +E +GC+PD T
Sbjct: 616 ESEAREMFSSIERHGCVPDSYT 637
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 5/237 (2%)
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S +Y+ + AL K D A + M++ G +PD TY+ +I G+CK G ++
Sbjct: 174 LGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDE 233
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ +ME+ G P++ T+TILI G A VD AL M + + + + ++
Sbjct: 234 AIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVH 293
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G A+++LV +EK + + ++ L +E LR + ++ Y
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDS-NLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYI 352
Query: 547 PFPEPFVQYISKF----GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
P F +S VE F +S P YL + ++ N R E
Sbjct: 353 PDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEG 409
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 150/381 (39%), Gaps = 40/381 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K + TYN ++ + + V + +V++M++EG ++ TY + F +++A
Sbjct: 210 GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEA 269
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+K E M P+ + I P F V + ++L + YD +
Sbjct: 270 LKQLEMMRVRKLNPNEATIRTFVHGIFRCLPP--CKAFEVLVGFMEKDSNLQRVGYDAVL 327
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L+ E + ++ + G+ PD+ T++ + L K + C + D G
Sbjct: 328 YCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVK 387
Query: 441 PDIKTWTILIQGHCAA---NEVDRAL---------------------LCFAKMMEKNYDA 476
P + +L+Q A +E DR L LC A+ +E
Sbjct: 388 PGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMF 447
Query: 477 DADLLD-------VLINGFLSQKRVNGAYKLLVEMIEKVRL---RPWQATFKTLIEKLLG 526
++ D V N FLS V G K + ++EK+ + +P TF +I L
Sbjct: 448 LTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCR 507
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALS-VKE---YPSSAA 582
A+ +++A + + M + P + I + D +K + +KE P A
Sbjct: 508 AKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYA 567
Query: 583 YLQVFESFFNEGRHYEAKDLL 603
Y +SF + +A++LL
Sbjct: 568 YNATIQSFCKMRKVKKAEELL 588
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/369 (20%), Positives = 149/369 (40%), Gaps = 42/369 (11%)
Query: 209 VVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTIT 268
V+ DW + ++ +I L+ FV++VL+ + P+ +L F+ WV +
Sbjct: 53 VIERKDWFLILNQEFTTHRIGLNTRFVISVLQN-QDNPLHSLRFYLWVSNFDPVYAKDQS 111
Query: 269 YNGIL-RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
+L L R + +++E++ GY + + + + + + + +F +
Sbjct: 112 LKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQI 171
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
KPS + + ++ ++ N+ DL L F+ + S G + Y+ + + K
Sbjct: 172 SFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQ---QMRSDGCKPDRFTYNILIHGVCKK 228
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G DEA +++K M+ G P+ TY+ +I G AGR ++A L+ M P+ T
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATI 288
Query: 447 TILIQG------HCAANEV----------------DRALLCFA-------------KMME 471
+ G C A EV D L C + K+ E
Sbjct: 289 RTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGE 348
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
+ Y D+ + ++ L + ++ + + ++P + L++ LL A+R
Sbjct: 349 RGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSR-GVKPGFNGYLVLVQALLNAQRFS 407
Query: 532 EAMNLLRLM 540
E L+ M
Sbjct: 408 EGDRYLKQM 416
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 164/364 (45%), Gaps = 14/364 (3%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK-KEGYEMDIDTY 304
P +AL R + + N +TYN ++ V+ +++ EM+ + G + TY
Sbjct: 170 PARALELLRQMP-----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTY 224
Query: 305 IKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + K +++AVK+F E + G KP + L+ D L++R ++
Sbjct: 225 GTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYR--DR 282
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
G +++ + Y+ + AL GR EA ++++ M G D TY+ +I G CK G
Sbjct: 283 MVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGN 342
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+ A + + M G + T+T LI +V F + + + D L +
Sbjct: 343 VKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNA 402
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
LIN + ++ A++++ EM EK R+ P T+ TL+ L R++EA L+ M K+
Sbjct: 403 LINSHSTSGNIDRAFEIMGEM-EKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKR 461
Query: 544 NYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
P + IS + G V+DA + K + P+ Y + + G+ +A
Sbjct: 462 GIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDA 521
Query: 600 KDLL 603
++++
Sbjct: 522 ENMV 525
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 126/281 (44%), Gaps = 37/281 (13%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G TYN ++ L + + +VEEM +G +D+ TY + K ++ A
Sbjct: 287 GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKA 346
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANK 363
+++FE M + +V + L+ ++S PDL L
Sbjct: 347 LEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL------- 399
Query: 364 YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGR 423
Y +L NS S S G D A ++M M+ PD++TY+ ++ GLC GR
Sbjct: 400 YNALINSHSTS------------GNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGR 447
Query: 424 FEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++A ++DEM + G PD+ T+ LI G+ +V AL +MM K ++ +
Sbjct: 448 VDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
LI G + + A ++ EM+E + P +T+ +LIE L
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVEN-GITPDDSTYISLIEGL 547
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 102/231 (44%), Gaps = 2/231 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ + +V+ + E M + G + TY + K +++
Sbjct: 322 GLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQET 381
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF+ + +P + + L+ S S+ N D F + + E + Y+ +
Sbjct: 382 DKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRA--FEIMGEMEKKRIAPDDVTYNTLM 439
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R L LGR DEA K++ M G +PD +TY+ +I G G +DA + +EM G
Sbjct: 440 RGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFN 499
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
P + T+ LIQG C + D A +M+E D LI G ++
Sbjct: 500 PTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE 550
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 85/176 (48%), Gaps = 7/176 (3%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
L + ++ + R L G+ A ++++ M P+ +TY+ VI G C GR + A ++
Sbjct: 152 LCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDI 207
Query: 431 LDEMEENGCI-PDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-YDADADLLDVLINGF 488
+ EM E G I P+ T+ +I G C VD A+ F +M+ K +A + + LI G+
Sbjct: 208 MREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGY 267
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
Q +++ A M+E+ + AT+ L+ L R EA L+ M +
Sbjct: 268 CDQGKLDTALLYRDRMVER-GVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 153/372 (41%), Gaps = 22/372 (5%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEM-----KKEGYEMD 300
P AL FF WV G++H ++ +L++LAR + ++ +V M E
Sbjct: 68 PATALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREA 127
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+D I R R A L M + + ++L++ + LV V
Sbjct: 128 VDAIQAIRRVGGDLR---KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLV 184
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
+ G SL+ Y + + L K GR A ++++ M G P TY+ +I G CK
Sbjct: 185 MMVQD--GCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCK 242
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
+GR +DA + ME NGC PD T+ ILI G C + D A + + +
Sbjct: 243 SGRMKDALGIKALMERNGCNPDDWTYNILIYGLC-GEKPDEAEELLNDAIVRGFTPTVIT 301
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIE---KVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ING+ +R++ A ++ M+ K+ L+ + LI+K R +EA +
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKC----RFKEAKETV 357
Query: 538 RLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEY----PSSAAYLQVFESFFNE 593
M P + I + V L+ + E+ P++ Y + +
Sbjct: 358 SEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQD 417
Query: 594 GRHYEAKDLLYK 605
+ ++A L+ K
Sbjct: 418 QKLHKAMALITK 429
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 153/368 (41%), Gaps = 30/368 (8%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G + YN + L + + ++ + ++G + TY + F K
Sbjct: 466 EQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVDGFSKAGNT 522
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M++ K S+LL+++ L + ++ G + Y
Sbjct: 523 DFAAVLIEKMVNEGCKADSYTYSVLLQALC--KQKKLNEALSILDQMTLSGVKCNIVAYT 580
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I + K G+ D A+ M M ++G +P TY+ I CK G+ E+A +++ EME +
Sbjct: 581 IIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERD 640
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G PD+ T+ + I G +DRA +M++ + + + +L+ FL V+
Sbjct: 641 GVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAH 700
Query: 498 YK---------------LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
Y L+E + K L P T+ ++I A RLEEA L M+
Sbjct: 701 YVDTSGMWNWIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRG 760
Query: 543 QNYPPFPEPFVQYISKFGTVEDASEFLKALS----VKEY---PSSAAYLQVFESFFNEGR 595
++ P E + I D F KA+S + E+ P +Y + +EG
Sbjct: 761 KDISPNEEIYTMLIK---CCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGD 817
Query: 596 HYEAKDLL 603
+ +AK L
Sbjct: 818 YDKAKSLF 825
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 130/603 (21%), Positives = 238/603 (39%), Gaps = 101/603 (16%)
Query: 48 HTSQFHINTCQKIFFSTSPNSSLELILA-CDWSDELENKLEELSPKLTHESVVYVLRKLD 106
HT+ H Q + +P + +L+++ SD E+ E + + +R++
Sbjct: 86 HTAASHAALLQLLARRRAPANYDKLVVSMVSCSDTAEDMREAVD-------AIQAIRRVG 138
Query: 107 NDPEKASAFFNWV----CDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
D KA + C + ++ Y+++++ L +++ V L M +D C +
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNEYS-----YTILIQGLCETRCVREALVLLVMMVQDGCSL 193
Query: 163 EEETY-LSILGVLKKAKKASDLAALNQFHDG--MVKEIAMDNVAKTLVDVVLGSDWDDKI 219
TY L I G+ K+ + H +++E+ + V ++ D K
Sbjct: 194 NLHTYTLLIKGLCKEGR----------IHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKS 243
Query: 220 GKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
G+ MK L +KAL E +G + TYN ++ L
Sbjct: 244 GR----MKDALG---------------IKALM------ERNGCNPDDWTYNILIYGLC-G 277
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
E + ++ + G+ + T+ I + K ++DA+++ M+ K +Q
Sbjct: 278 EKPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAY 337
Query: 340 SLLLRSISSINNPDLGLVFRVANKY--ESLGNSLSKSV--YDGIHRALTKLGRFDEAEKM 395
+L IN F+ A + E N L+ +V Y I K+G+ A ++
Sbjct: 338 GVL------INVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEV 391
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M++ G P+ TYS +I+GL + + A ++ +M+E+G P + T+T LIQG C
Sbjct: 392 FRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCK 451
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE------------ 503
+E D A F M + D +VL + R AY LV
Sbjct: 452 KHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTS 511
Query: 504 ----------------MIEKVRLRPWQA---TFKTLIEKLLGARRLEEAMNLLRLMK--- 541
+IEK+ +A T+ L++ L ++L EA+++L M
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571
Query: 542 -KQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
K N + + I + S F + +S PS+ Y S+ G+ EA+
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAE 631
Query: 601 DLL 603
L+
Sbjct: 632 HLI 634
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/285 (21%), Positives = 120/285 (42%), Gaps = 21/285 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG+K + TY + + + + +++ EM+++G D+ TY M+
Sbjct: 605 SGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDR 664
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A + M+D +P+ +LL+ ++ D A+ ++ G +++ I
Sbjct: 665 AFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVD-------AHYVDTSG------MWNWI 711
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
D ++++ M G P +TYS +I G CKA R E+AC + D M
Sbjct: 712 --------ELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDI 763
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ + +T+LI+ C +A+ M+E + + LI G + + A
Sbjct: 764 SPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKS 823
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
L +++ + +K L + LL A ++ LL M+ ++
Sbjct: 824 LFCDLLGMEDYNHNEVAWKILNDGLLKAGHVDFCSQLLSAMENRH 868
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 104/480 (21%), Positives = 198/480 (41%), Gaps = 33/480 (6%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
P+ Y+++L+ L +++ +Q L M + ++T + D+ +
Sbjct: 160 PNVFSYTILLKGLCDENRSQQALHLLHTM-----MVADDT---------RGGYPPDVVSY 205
Query: 187 NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYP 246
N +G+++E + A L D +L + ++ N +++ L + R
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDV----------VTYNSIISALSKARAMD 255
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
A+ R V +G N IT+N +L D V + M ++G E D+ TY
Sbjct: 256 KAAVVLVRMV--KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNT 313
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ K +A K+F+ M+ +KP+ LL ++ L + + +
Sbjct: 314 LMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYAT--EGSLVKMHHLLDMMVR 371
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
G +++ + TK G+ D+A + M+ G PD +TY V+ LC G+ +D
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDD 431
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A + G PD + LI G CA ++ D+A +M+ + + + L+N
Sbjct: 432 AMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLN 491
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
+ V A K + +++ +V ++ T+ TLI+ +++EA LL M
Sbjct: 492 HLCKEGMVARA-KNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVK 550
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P + I+ + G +EDA + ++ K P Y + + F R AK+L
Sbjct: 551 PNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKEL 610
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 147/346 (42%), Gaps = 7/346 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K N+ TY +L A S+ ++++ M + G + D + + + K ++DA
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LF M P +++ ++ + D + + S G + V+ +
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMA--QFGRLISEGLTPDAVVFRNLI 455
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L ++D+AE++ M G P+NI ++ ++ LCK G A N+ D M
Sbjct: 456 HGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQ 515
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ T+ LI G+C +VD A M+ + + +ING+ R+ A+ L
Sbjct: 516 RDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSL 575
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQYIS 557
+M K + P T+ T+++ L ARR A L M K + +
Sbjct: 576 FRQMASK-GVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLC 634
Query: 558 KFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDL 602
+ +DA + L + ++ + + + ++ GRH EAKDL
Sbjct: 635 QNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 144/351 (41%), Gaps = 12/351 (3%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
GY + ++YN ++ L R D +++ ++M +G D+ TY I K R M+
Sbjct: 196 GGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMD 255
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVY 376
A + M+ P+ + LL S P+ +G+ R+ G Y
Sbjct: 256 KAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRD----GVEPDVFTY 311
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L K GR EA K+ +M G +P++ TY ++ G G ++LD M
Sbjct: 312 NTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVR 371
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
NG PD + ILI + +VD A+L F+KM + + D ++++ +V+
Sbjct: 372 NGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDD 431
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
A +I + L P F+ LI L + ++A L M + P F +
Sbjct: 432 AMAQFGRLISE-GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLL 490
Query: 554 QYISKFGTVEDASEFLKAL-SVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
++ K G V A + V Y + + + G+ EA LL
Sbjct: 491 NHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLL 541
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 110/254 (43%), Gaps = 15/254 (5%)
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV-LDEMEENGCIPD 442
+++G D A + + +G+ + IT+S ++ LC R +A ++ L M GC P+
Sbjct: 102 SRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPN 161
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMM-----EKNYDADADLLDVLINGFLSQKR-VNG 496
+ ++TIL++G C N +AL MM Y D + +ING L + R ++
Sbjct: 162 VFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDT 221
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
AY L +M+++ L P T+ ++I L AR +++A +L M K P +
Sbjct: 222 AYHLFDQMLDQ-GLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Query: 554 QYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAK---DLLYKCPHH 609
G DA K + P Y + GR EA+ D + K H
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHK 340
Query: 610 IRQDSKISLLFGSA 623
+ +LL G A
Sbjct: 341 PNSATYGTLLHGYA 354
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 77/161 (47%), Gaps = 1/161 (0%)
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G+ DEA K+++ M G +P+ +TY+ +I G CK GR EDA ++ +M G P I T+
Sbjct: 532 GKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTY 591
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
+ ++QG A A + M++ D ++++ G + A ++ + +
Sbjct: 592 STILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIF-QNLY 650
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ TF +I+ LL R +EA +L + + P
Sbjct: 651 LIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVP 691
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 42/267 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N I +N +L L + V N+ + M + + D+ TY + + +++A
Sbjct: 478 GICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEA 537
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KL E M+ KP+ + Y+ +
Sbjct: 538 AKLLEGMVLDGVKPN-------------------------------------EVTYNTMI 560
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K GR ++A + + M + G P +TYS ++ GL +A R A + M ++G
Sbjct: 561 NGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIK 620
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
DI T+ I++ G C N D AL F + ++ + +++I+ L R + A L
Sbjct: 621 FDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDL 680
Query: 501 LVEMIEKVRLRPWQATF----KTLIEK 523
++ + L P T+ K+LIE+
Sbjct: 681 FASLLAR-GLVPNVVTYWLMMKSLIEQ 706
>gi|356528212|ref|XP_003532699.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g37230-like [Glycine max]
Length = 738
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 89/414 (21%), Positives = 183/414 (44%), Gaps = 47/414 (11%)
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+N+ T+ ++ W ++ + + E + V VL P AL F+RWV
Sbjct: 54 NNLELTICKMMSNRAWTTRLQNSIRSLVPEFDPSLVYNVLHGA-ASPEHALQFYRWVERA 112
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYE---MDIDTYIKISRQFQKFRM 316
+ H T I+++L R+ + ++ + + G + D ++ + + + +
Sbjct: 113 GLFTHTPETTLKIVQILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGI 172
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++++VKLF+ K + LG + Y
Sbjct: 173 VQESVKLFK-------------------------------------KMKELGVDRTVKSY 195
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
D + + + + GR+ A++ AM N EP TY+ +++G+ + R + A ++M+
Sbjct: 196 DALFKVILRRGRYMMAKRYYNAMLNESVEPTRHTYNILLWGMFLSLRLDTAVRFYEDMKS 255
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G +PD+ T+ LI G+ +V+ A F +M ++ + ++ G+++ +++
Sbjct: 256 RGILPDVVTYNTLINGYFRFKKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDD 315
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-FVQY 555
A K+ EM + ++P TF TL+ L A ++ EA ++L M ++ P F++
Sbjct: 316 ALKVFEEM-KGCGVKPNAVTFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKL 374
Query: 556 IS---KFGTVEDASEFLKALSVKEYPSSAAYLQVF-ESFFNEGRHYEAKDLLYK 605
+S K G ++ A + LKA+ P+ A + V E+F + +A+ LL K
Sbjct: 375 MSCQCKAGDLDAAGDVLKAMIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDK 428
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 109/539 (20%), Positives = 211/539 (39%), Gaps = 58/539 (10%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR--PSSTVYSLM 135
W+ L+N + L P+ S+VY + PE A F+ WV F P +T+ +
Sbjct: 69 WTTRLQNSIRSLVPEF-DPSLVYNVLHGAASPEHALQFYRWVERAGLFTHTPETTLKIVQ 127
Query: 136 LRNLVNK-DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMV 194
+ +K + + R + E+ ++S++ +A + L + +
Sbjct: 128 ILGRYSKLNHARCILFDDTRGGASRATVTEDAFVSLIDSYGRAGIVQESVKLFK----KM 183
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
KE+ +D K+ +D L + ++ + +L E + P +
Sbjct: 184 KELGVDRTVKS---------YDALFKVILRRGRYMMAKRYYNAMLNE-SVEPTR------ 227
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+ +N + + G+ L +VR + E+MK G D+ TY + + +F
Sbjct: 228 -------HTYNILLW-GMFLSLRLDTAVRFY----EDMKSRGILPDVVTYNTLINGYFRF 275
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+ +E+A KLF M P+V + +L+ + D L +V + + G +
Sbjct: 276 KKVEEAEKLFVEMKGRDIVPNVISFTTMLKGYVAAGQIDDAL--KVFEEMKGCGVKPNAV 333
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP-DNITYSQVIFGLCKAGRFEDACNVLDE 433
+ + L + EA ++ M P DN + +++ CKAG + A +VL
Sbjct: 334 TFSTLLPGLCDAEKMAEARDVLGEMVERYIAPKDNAVFMKLMSCQCKAGDLDAAGDVLKA 393
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN-------------YDADADL 480
M + + +LI+ C AN D+A KM+EK ++ +
Sbjct: 394 MIRLSIPTEAGHYGVLIENFCKANLYDKAEKLLDKMIEKEIVLRQKNAYETELFEMEPSA 453
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
+++I G+L + G + + K ++ +F LI + A ++++M
Sbjct: 454 YNLMI-GYLCEHGRTGKAETFFRQLMKKGVQD-SVSFNNLICGHSKEGNPDSAFEIIKIM 511
Query: 541 KKQNYPPFPEPFVQYISKF---GTVEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGR 595
++ + + I + G DA L L P S+ Y V ES F++GR
Sbjct: 512 GRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHLPESSLYRSVMESLFDDGR 570
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 2/192 (1%)
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+V R N YE+ + S Y+ + L + GR +AE + + G + D+++++ +I
Sbjct: 434 IVLRQKNAYETELFEMEPSAYNLMIGYLCEHGRTGKAETFFRQLMKKGVQ-DSVSFNNLI 492
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G K G + A ++ M G D ++ +LI+ + E A M+E +
Sbjct: 493 CGHSKEGNPDSAFEIIKIMGRRGVARDADSYRLLIESYLRKGEPADAKTALDGMLESGHL 552
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
++ L ++ RV A +++ M+EK ++ ++E LL +EEA+
Sbjct: 553 PESSLYRSVMESLFDDGRVQTASRVMKSMVEK-GVKENMDLVSKVLEALLMRGHVEEALG 611
Query: 536 LLRLMKKQNYPP 547
+ L+ P
Sbjct: 612 RIHLLMLNGCEP 623
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 83/180 (46%), Gaps = 4/180 (2%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ S+Y + +L GR A ++MK+M G + + S+V+ L G E+A
Sbjct: 550 GHLPESSLYRSVMESLFDDGRVQTASRVMKSMVEKGVKENMDLVSKVLEALLMRGHVEEA 609
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
+ + NGC PD + L+ C + AL ++E++ D + D +++
Sbjct: 610 LGRIHLLMLNGCEPD---FDHLLSVLCEKEKTIAALKLLDFVLERDCIIDFSIYDKVLDA 666
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L+ + AY +L +++EK W ++ LI+ L ++A L R++K + P
Sbjct: 667 LLAAGKTLNAYSILCKILEKGGSTDW-SSRDELIKSLNQEGNTKQADVLSRMIKGTDGGP 725
>gi|15219409|ref|NP_178072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75200774|sp|Q9SAJ5.1|PP133_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g79540
gi|4835755|gb|AAD30222.1|AC007202_4 Contains similarity to gi|2827663 F18F4.190 membrane-associated
salt-inducible-like protein from Arabidopsis thaliana
BAC gb|AL021637 [Arabidopsis thaliana]
gi|332198140|gb|AEE36261.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 780
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 174/426 (40%), Gaps = 43/426 (10%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I LE + LS N + +V+K+ + FF W + ++ ++ +L+
Sbjct: 47 IEPALEPLVPFLSKNIITSVIKD-EVNRQLGFRFFIW-ASRRERLRSRESFGLVIDMLSE 104
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+W +EE+K G +D + + + K M E AV+ F M + +P V
Sbjct: 105 DNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFT 164
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+++LR + L F V N+ S + + + L K GR +A+KM
Sbjct: 165 YNVILRVMMR-EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDD 223
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD---------------- 442
M G P+ +TY+ +I GLC+ G +DA + EM+ +G PD
Sbjct: 224 MTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGR 283
Query: 443 -------------------IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
++ ++ LI G A +A +A M++KN D L +
Sbjct: 284 MVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTI 343
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL-LRLMKK 542
LI G ++ A KLL M K + P + +I+ L G LEE +L L + +
Sbjct: 344 LIQGLSKAGKIEDALKLLSSMPSK-GISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSET 402
Query: 543 QNYPPFPEPFVQYIS--KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEA 599
+++P + S + G V +A E + PS A + + + G EA
Sbjct: 403 ESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEA 462
Query: 600 KDLLYK 605
+ LL+K
Sbjct: 463 RLLLHK 468
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 146/368 (39%), Gaps = 43/368 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD-------IDTYIKISRQFQK 313
G N +TY ++ L + S D + EM+ G D +D + K+ R +
Sbjct: 228 GISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEA 287
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
F ++ +LFE DG L LR SS+ + L R +E N L K
Sbjct: 288 FELL----RLFE--KDGFV--------LGLRGYSSLID-GLFRARRYTQAFELYANMLKK 332
Query: 374 SV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
++ Y + + L+K G+ ++A K++ +M + G PD Y+ VI LC G E+
Sbjct: 333 NIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEG 392
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
++ EM E PD T TILI C V A F ++ + + LI+G
Sbjct: 393 RSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDG 452
Query: 488 FLSQKRVNGAYKLLVEMIEKVR-----LR---PWQATFKTLIEKLLGARRLEEAMNLLRL 539
+ A +LL+ +E R LR +F T++E L+ +L
Sbjct: 453 LCKSGELKEA-RLLLHKMEVGRPASLFLRLSHSGNRSFDTMVES---GSILKAYRDLAHF 508
Query: 540 MKKQNYPPFPE--PFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRH 596
+ P + + G ++ A + L L +K P S Y + GR
Sbjct: 509 ADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGRE 568
Query: 597 YEAKDLLY 604
EA L Y
Sbjct: 569 EEAFKLFY 576
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 96/235 (40%), Gaps = 15/235 (6%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + ++YN ++ R + ++ ++ +G D TY + + E+
Sbjct: 511 TGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEE 570
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSIS--SINNPDLGLVFRVANKYESLGNSLSKSVYD 377
A KLF D + P+V RS+ S + + F + KY + L +
Sbjct: 571 AFKLFYAKDDFRHSPAVY------RSLMTWSCRKRKVLVAFNLWMKYLKKISCLDDETAN 624
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT---YSQVIFGLCKAGRFEDACNVLDEM 434
I + + E E+ ++ + D +T Y+ + GLC++GRF +A V +
Sbjct: 625 EIEQCFKE----GETERALRRLIELDTRKDELTLGPYTIWLIGLCQSGRFHEALMVFSVL 680
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
E + + LI G C ++D A+ F ++ N+ + + L++ L
Sbjct: 681 REKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLL 735
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 121/510 (23%), Positives = 217/510 (42%), Gaps = 49/510 (9%)
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK------ 142
+ P L + V V+R DP KA FN + + F+ + + Y R+++ K
Sbjct: 1 MGPPLLPKHVTTVIR-CQKDPMKALEMFNSMRKEDGFKHTLSTY----RSIIEKLGLYGK 55
Query: 143 -DSLKQFWVTLRRMKEDHCYIEEETYLSIL---GVLKKAKKASDLAALNQFHDGMVKEIA 198
+++++ V +R+ +H + E Y+ + G K ++A ++ F+D +
Sbjct: 56 FEAMEEVLVDMRQNVGNH--MLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFS 113
Query: 199 MDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGE 258
+ + LVD S + D+ K M+ + ++ + ++ F R
Sbjct: 114 YNAIMSILVD----SGYFDQAHKVYMRMRDR-------GITPDVYSFTIRMKSFCRTSRP 162
Query: 259 HSGYKH-NTITYNGI-LRVLARHESVRDFWNVVEEMKKEGYEM-----------DIDTYI 305
H+ + N ++ G + V+A V F+ E K EGYE+ + T+
Sbjct: 163 HAALRLLNNMSSQGCEMNVVAYCTVVGGFYE--ENFKDEGYELFGKMLASGVSLCLSTFN 220
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+ K +++ KL + ++ P++ + ++ + +L R+ +
Sbjct: 221 KLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQ--KGELDAAVRMVGRLI 278
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G Y+ + L K +F EAE + + N G EPD+ TY+ +I G CK G +
Sbjct: 279 DQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQ 338
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +L NG +PD T+ LI G C E +RAL F + + K + L + LI
Sbjct: 339 LAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
G +Q + A +L EM EK L P TF L+ L + +A L+++M + Y
Sbjct: 399 KGLSNQGLILEAAQLASEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGY 457
Query: 546 PPFPEPFVQYISKFGT---VEDASEFLKAL 572
P F I + T +E+A E L +
Sbjct: 458 FPDIFTFNILIHGYSTQLKMENALEILDVM 487
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 146/349 (41%), Gaps = 41/349 (11%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N I YN +++ L+ + + + EM ++G ++ T+ + K + DA
Sbjct: 386 GIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDA 445
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L + M+ Y P + ++L IH
Sbjct: 446 DGLVKVMISKGYFPDIFTFNIL------------------------------------IH 469
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
T+L + + A +++ M + G +PD TY+ ++ GLCK ++ED M E GC
Sbjct: 470 GYSTQL-KMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCA 528
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ IL++ C +++D+AL +M K+ + DA LI+GF ++GAY L
Sbjct: 529 PNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+M E + T+ +I + A L + M + P + V
Sbjct: 589 FRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFC 648
Query: 558 KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G V+ +FL + + PS +V E R YEA ++++
Sbjct: 649 KTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHR 697
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
T+N ++ L + V D +V+ M +GY DI T+ + + ME+A+++ + M
Sbjct: 428 TFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM 487
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVYDGIHRALT 384
MD P V + LL + + + V Y+++ G + + ++ + +L
Sbjct: 488 MDNGVDPDVYTYNSLLNGLCKTSKYE-----DVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-------- 436
+ + D+A +++ MKN PD +T+ +I G CK G + A + +MEE
Sbjct: 543 RYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCST 602
Query: 437 ---------------------------NGCI-PDIKTWTILIQGHCAANEVDRALLCFAK 468
+ C+ PD T+ +++ G C VD +
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLE 662
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
MME + L +IN + RV A ++ M++K
Sbjct: 663 MMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 91/220 (41%), Gaps = 3/220 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + TYN +L L + D + M ++G ++ T+ + ++ ++
Sbjct: 490 NGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDK 549
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGN-SLSKSVYDG 378
A+ L E M + P L+ N DL + + K E + S S Y+
Sbjct: 550 ALGLLEEMKNKSVNPDAVTFGTLIDGFCK--NGDLDGAYTLFRKMEEVYMVSCSTPTYNI 607
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
I A T+ AEK+ + M + PD TY ++ G CK G + L EM ENG
Sbjct: 608 IIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENG 667
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
IP + T +I C + V A +M++K +A
Sbjct: 668 FIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEA 707
>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
Length = 722
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 156/676 (23%), Positives = 263/676 (38%), Gaps = 97/676 (14%)
Query: 27 PLFTR-VTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELEN- 84
P FT+ + +FF SF+ S S ++F+ +T +F +T+ S +W L+
Sbjct: 14 PKFTKNLQYFFKTPSFSIS-PSGFNRFYNDT---VFNNTNGLDS-----GTEWERLLKPF 64
Query: 85 KLEELSPKLTHESVVYV--LRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
L EL LT + + L +L D + F W +K + VY +++ L
Sbjct: 65 DLPELRTSLTRITPYQLCKLLELPLDVPTSMELFQWAGTQKGYCHMFDVYYMLIDKLGAA 124
Query: 143 DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNV 202
K L +MK++ E ++ I+ +A L G+
Sbjct: 125 GEFKTIDALLMQMKQEGIVFRESLFILIMKHYGRAGLPGQATRLLLDMRGVYSCEPTFRS 184
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLT---VLKELRIYPV--KALGFFRWVG 257
++DV+L + + +M + V T V+K L + A + +
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 244
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
H G N I Y ++ L + V + ++EEM G D++T+ K +
Sbjct: 245 RH-GCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSI-------------SSINNPDLGLVFRVANKY 364
+A KL + M+ + P+ +L+ + + + NP++ L + N Y
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPNPNVVLFNTLINGY 363
Query: 365 ESLGN-SLSKSV----------------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
S G +K+V Y+ + L K G A ++M M+ G EP+
Sbjct: 364 VSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPN 423
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDE---------------------------------- 433
ITY+ +I CK GR E+A NVLDE
Sbjct: 424 VITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFG 483
Query: 434 -MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
M GC PDI T+ LI G C N+ + AL + M+ + A+ + LI+ FL +
Sbjct: 484 DMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRG 543
Query: 493 RVNGAYKLLVEMIEKVRLRPW-QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---F 548
+ A KL+ +M+ R P T+ LI+ L A +E+ + L M + P
Sbjct: 544 AMQEALKLVNDML--FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNIS 601
Query: 549 PEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK-- 605
+ + + G ++ A EFL+ + + P Y + GR EA +L K
Sbjct: 602 CNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQ 661
Query: 606 ----CPHHIRQDSKIS 617
CP I ++ IS
Sbjct: 662 VEGICPDAITYNTLIS 677
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 122/266 (45%), Gaps = 5/266 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N + YN ++ L + E V+D N+ +M +G + DI T+ + K E+A
Sbjct: 454 GLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEA 513
Query: 321 VKLFE-FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ L++ +++G ++ +L+ + + + ++ N G L Y+G+
Sbjct: 514 LGLYQDMLLEGVIANTITYNTLIH---AFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 570
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+AL + G ++ + + M + G P+NI+ + +I GLC+ G + A L +M G
Sbjct: 571 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 630
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T+ LI G C AL F K+ + DA + LI+ + + A+
Sbjct: 631 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 690
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLL 525
LL ++ + P + T+ L+ +
Sbjct: 691 LLSRGVDSGFI-PNEVTWYILVSNFI 715
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 37/231 (16%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NTITYN ++ R ++++ +V +M G +D TY + + + +E
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ LFE MM P+ C++L+ + N L F + D IH
Sbjct: 584 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEF----------------LRDMIH 627
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
R LT PD +TY+ +I GLCK GR ++A N+ D+++ G
Sbjct: 628 RGLT---------------------PDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGIC 666
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
PD T+ LI HC D A L ++ ++ + + +L++ F+ +
Sbjct: 667 PDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKE 717
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/373 (22%), Positives = 145/373 (38%), Gaps = 77/373 (20%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TYN ++ L + + ++ EM+ +G E ++ TY + +F K +E+A
Sbjct: 384 GCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEA 443
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M G +L+ Y+ +
Sbjct: 444 RNVLDEM-------------------------------------SGKGLALNAVGYNCLI 466
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN----------- 429
AL K + +A M M + G +PD T++ +IFGLCK +FE+A
Sbjct: 467 SALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVI 526
Query: 430 ------------------------VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
++++M GC D T+ LI+ C A +++ L
Sbjct: 527 ANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLAL 586
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
F MM K + + ++LING + A + L +MI + L P T+ +LI L
Sbjct: 587 FEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHR-GLTPDIVTYNSLINGLC 645
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYPSSA 581
R +EA+NL ++ + P + IS K G +DA L + + P+
Sbjct: 646 KTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEV 705
Query: 582 AYLQVFESFFNEG 594
+ + +F EG
Sbjct: 706 TWYILVSNFIKEG 718
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 163/359 (45%), Gaps = 8/359 (2%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
A FF + +H G + +YN ++ L S+ + ++ +M+ G E D+ TY ++
Sbjct: 300 AKSFFCMMLKH-GLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA 358
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
+ F+ ++ A + + M+ P++ ++L+ I N + L ++ + S G
Sbjct: 359 KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEAL--KLYKEMISHG 416
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
LS + +L K + D A K+ M+ G PD ITYS +I GLCK G + A
Sbjct: 417 FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAI 476
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+ ++M N IP+ ++ G C ++ +A + F ++ N D L +++I+G+
Sbjct: 477 LLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGY 536
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ + A KL ++ EK + P TF +L+ R+L +A LL +K P
Sbjct: 537 IKRGNTREAVKLYKQLGEK-GISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPN 595
Query: 549 PEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++ + G ++ E L + K P+ Y V + + + E+ LL
Sbjct: 596 AVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLL 654
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 126/281 (44%), Gaps = 8/281 (2%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TYN +L L RH ++ W+V E+K G T + + +DAV F+
Sbjct: 216 TYNSLLYNL-RHSNI--MWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDT 272
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRALTKL 386
++PSV + ++ + D+ F + K+ L ++ S Y+ + L
Sbjct: 273 EGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYS---YNILIHGLCIA 329
Query: 387 GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTW 446
G EA + M+N G EPD +TY+ + G G A N++ +M G P++ T+
Sbjct: 330 GSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTY 389
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
T+LI GHC V+ AL + +M+ + VL+ ++V+ A+KL EM E
Sbjct: 390 TVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM-E 448
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
LRP T+ TLI L +++A+ L M P
Sbjct: 449 ANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIP 489
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 141/329 (42%), Gaps = 9/329 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL ++ + H G++ + I+ +L L + V + + EM+ G D+ TY +
Sbjct: 404 EALKLYKEMISH-GFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTL 462
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K ++ A+ L+E M P+ +L + R+ Y
Sbjct: 463 IHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQA---RMYFDYLIT 519
Query: 368 GN-SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
N SL +Y+ + K G EA K+ K + G P +T++ +++G C +
Sbjct: 520 SNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQ 579
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A +LD ++ +G P+ T+T L+ +C + L ++M K V+I
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIK 639
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G Q ++ + +LL +M + V L P Q ++ T+I+ AR + +A L M N
Sbjct: 640 GLCKQWKLQESCQLLEDM-DAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLE 698
Query: 547 PFPEPFVQYISKF---GTVEDASEFLKAL 572
P + I+ F G ++DA L +L
Sbjct: 699 PTSVTYNILINGFCVYGDLKDADNLLVSL 727
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 115/250 (46%), Gaps = 12/250 (4%)
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
Y + ID YIK +AVKL++ + + P++ + L+ N L
Sbjct: 529 YNIMIDGYIKRGNT-------REAVKLYKQLGEKGISPTIVTFNSLMYGFCI--NRKLSQ 579
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
R+ + + G + Y + + G +++ MK P +ITY+ VI
Sbjct: 580 ARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIK 639
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLCK + +++C +L++M+ G PD ++ +IQ C A ++ +A + KM+ N +
Sbjct: 640 GLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEP 699
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMI-EKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ ++LINGF + A LLV + KV L + + T+I+ +++A+
Sbjct: 700 TSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKY--AYTTIIKAHCAKGDVDKAVV 757
Query: 536 LLRLMKKQNY 545
R M ++ +
Sbjct: 758 YFRQMVEKGF 767
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/294 (20%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A+ ++ +GE G +T+N ++ + + +++ +K G E + TY +
Sbjct: 544 EAVKLYKQLGE-KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTL 602
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
+ + M+ ++L M P+ +++++ + L ++ +++
Sbjct: 603 MNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLC--KQWKLQESCQLLEDMDAV 660
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + + Y+ I +A K +A ++ M EP ++TY+ +I G C G +DA
Sbjct: 661 GLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDA 720
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA----------- 476
N+L ++ + +T +I+ HCA +VD+A++ F +M+EK ++
Sbjct: 721 DNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGR 780
Query: 477 ------------------------DADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
D DL +VL+N F +N ++LL EMI+
Sbjct: 781 LCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIK 834
>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
Length = 948
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 207/500 (41%), Gaps = 62/500 (12%)
Query: 94 THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLR 153
++ V+ VL + D + A A + + + + P++ + + R L + LR
Sbjct: 141 SYNVVLSVLARADCHAD-ALALYRRMVHRDRVPPTTFTFGVAARALCRLGRANEALALLR 199
Query: 154 RMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGS 213
M C + Y +++ L ++ A L ++ ++ A D T DVV G
Sbjct: 200 GMARHGCVPDAVLYQTVIHALCDQGGVTEAATL--LNEMLLMGCAAD--VNTFDDVVRGM 255
Query: 214 DWDDKI--GKKLED-------MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH 264
++ +L D M ++ F+L L +R +A V E
Sbjct: 256 CGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVR-QADEARAMLGRVPEL----- 309
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + +N ++ + + + E M +G + D TY + K + AV+L
Sbjct: 310 NVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLL 369
Query: 325 EFMMDGPYKPSVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRA 382
M + P+V +++L S + + + L+ ++ K G +L+ Y+G+ A
Sbjct: 370 REMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAK----GLTLNSQGYNGMIYA 425
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC----------------------- 419
L K GR DEA +++ M++ G PD +Y+ +I+ LC
Sbjct: 426 LCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVAN 485
Query: 420 ------------KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ GR++DA + EM +GC D+ ++ LI+ C VDR+L+
Sbjct: 486 GITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLE 545
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M EK + ++LI+ ++RV A +L +M+ + L P T+ TLI L
Sbjct: 546 EMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQ-GLAPDIVTYNTLINGLCKM 604
Query: 528 RRLEEAMNLLRLMKKQNYPP 547
+ A+NLL + +N P
Sbjct: 605 GWMHAALNLLEKLHNENVHP 624
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 11/228 (4%)
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
RAL +LGR +EA +++ M G PD + Y VI LC G +A +L+EM GC
Sbjct: 183 RALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCA 242
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
D+ T+ +++G C V A +MM K L+ G ++ + A +
Sbjct: 243 ADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAM 302
Query: 501 LVEMIE-KVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
L + E V L F T+I L +L EA L M + P + + +
Sbjct: 303 LGRVPELNVVL------FNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGL 356
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
K G + A L+ + K + P+ Y V SF G + + LL
Sbjct: 357 CKLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALL 404
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 4/249 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G N+ YNG++ L + + + +++EM+ +G DI +Y I ME+A
Sbjct: 411 GLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEA 470
Query: 321 VKLFEFMMD-GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+FE +++ G + +++ + D R+A + G SL Y+G+
Sbjct: 471 EHMFENLLEEGVVANGITYNTIIHALLRDGRWQD---AVRLAKEMILHGCSLDVVSYNGL 527
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+A+ K G D + +++ M G +P+N++Y+ +I LCK R DA + +M G
Sbjct: 528 IKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGL 587
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T+ LI G C + AL K+ +N D ++LI+ + ++ A
Sbjct: 588 APDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAM 647
Query: 500 LLVEMIEKV 508
LL + V
Sbjct: 648 LLNRAMAAV 656
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 9/283 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G+ N +TY +L ++ D ++EEM +G ++ Y + K M
Sbjct: 373 EKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRM 432
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKS 374
++A+ L + M P + CS NN + + +E+L G +
Sbjct: 433 DEAMGLIQEMRSQGCNPDI--CSYNTIIYHLCNNEQM---EEAEHMFENLLEEGVVANGI 487
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ I AL + GR+ +A ++ K M G D ++Y+ +I +CK G + + +L+EM
Sbjct: 488 TYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEM 547
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
E G P+ ++ ILI C V AL +M+ + D + LING +
Sbjct: 548 AEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWM 607
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ A LL E + + P T+ LI R L++A LL
Sbjct: 608 HAALNLL-EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 3/199 (1%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P T+ LC+ GR +A +L M +GC+PD + +I C V A
Sbjct: 173 PTTFTFGVAARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 232
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+M+ AD + D ++ G RV A +L+ M+ K + P T+ L++ L
Sbjct: 233 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCM-PGVMTYGFLLQGLC 291
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYL 584
R+ +EA +L + + N F +++ G + +A+E + + +K P + Y
Sbjct: 292 RVRQADEARAMLGRVPELNVVLFNTVIGGCLAE-GKLAEATELYETMGLKGCQPDAHTYS 350
Query: 585 QVFESFFNEGRHYEAKDLL 603
+ GR A LL
Sbjct: 351 ILMHGLCKLGRISSAVRLL 369
>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 927
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 133/293 (45%), Gaps = 9/293 (3%)
Query: 249 ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKIS 308
AL +R + E SG N ITY ++ ++ + + EM+ +G E+DI Y +
Sbjct: 612 ALTAYREMCE-SGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALI 670
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLG 368
F K + +E A LF ++DG P+ + L+ ++NN + L + + G
Sbjct: 671 DGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL--NLQKRMLGEG 728
Query: 369 NSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDAC 428
S Y + L K GR A + M G PD I Y+ +I GLC G+ E+A
Sbjct: 729 ISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQ 788
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+L EME + P++ + LI GH A + A +M++K + D+LING
Sbjct: 789 KILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILINGK 848
Query: 489 LSQKRVNGAYKLLVEMIEK----VRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ K N A K L+ + K ++ Q + K +IEK + EA ++
Sbjct: 849 I--KGGNSALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAVNKYLRPEAQKMI 899
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 121/276 (43%), Gaps = 3/276 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N TYN +L L + + + + ++M +G +Y + + ++ A +F
Sbjct: 452 NIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVF 511
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+D KP+V S+L+ N D F V ++ S Y+ L
Sbjct: 512 SDMLDCGLKPNVITYSILMDGY--FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLC 569
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+GR EA+ M+K GF P +TY+ ++ G K G A EM E+G P++
Sbjct: 570 KVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVI 629
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+T LI G C N D AL +M K + D LI+GF ++ + A L E+
Sbjct: 630 TYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSEL 689
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
++ L P + +LI +E A+NL + M
Sbjct: 690 LDG-GLSPNSVIYNSLISGYRNLNNMEAALNLQKRM 724
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 134/329 (40%), Gaps = 8/329 (2%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
N +L L +++ + + V E+M +G D T + R K E+A K F
Sbjct: 213 NFLLTALVKNDMIYEAREVYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKS 272
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
K S+++++ N D+ L + G S+ + + A K G
Sbjct: 273 RGVKLDAAAYSIVIQAFCK--NLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNM 330
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
EA ++ M + G + + + + ++ G CK + A D+M ENG P+ T+ +L
Sbjct: 331 VEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVL 390
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I+ C + +A + +M KN +++ LI GFL + A KL E +
Sbjct: 391 IEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI 450
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVE-DA 565
+ T+ +L+ L ++ EA L + M + P + I + G ++ A
Sbjct: 451 ANIF--TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAA 508
Query: 566 SEFLKALSVKEYPSSAAYLQVFESFFNEG 594
S F L P+ Y + + +F G
Sbjct: 509 SVFSDMLDCGLKPNVITYSILMDGYFKNG 537
>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
Length = 694
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 148/371 (39%), Gaps = 72/371 (19%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + +TYN ++ + + + +V EM+K G D+ TY + F KF +E A
Sbjct: 229 GCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKA 288
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
F M LG++ V +LS V
Sbjct: 289 YSYFGEM------------------------KRLGVMANVV--------TLSTFV----- 311
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
A K G EA K+ M+ G P+ TY+ ++ G CKAGR +DA +LDEM G +
Sbjct: 312 DAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 371
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T+++ G C +V A + M A+ L LI+G K A L
Sbjct: 372 PNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDL 431
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L EM K + + + TLI L ++L+EA +LL M
Sbjct: 432 LNEMKNK-GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGL--------------- 475
Query: 561 TVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKIS--- 617
P++ Y + ++FF G+ EA LL+K P Q + ++
Sbjct: 476 ----------------RPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCA 519
Query: 618 LLFGSAKSNKV 628
L+ G K+ +
Sbjct: 520 LIDGLCKAGSI 530
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 133/314 (42%), Gaps = 41/314 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G K N + Y ++ +++ +++ EMK +G E+D+ Y + K + +
Sbjct: 401 ERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKL 460
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A L M D +P+ +Y
Sbjct: 461 DEAKSLLHKMDDCGLRPNT-------------------------------------VIYT 483
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I A K G+ EA ++ + ++G +P+ +TY +I GLCKAG +A + D+M E
Sbjct: 484 TIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMREL 543
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P+++ +T LI G C + +A+ +M++K D + LI+G + Q + GA
Sbjct: 544 GLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGA 603
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+ L +MIE L+ + I ++EA +L M P + ++
Sbjct: 604 FALKAKMIE-TGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIR 662
Query: 555 YISKFGTVEDASEF 568
K G +E+AS
Sbjct: 663 KYQKLGNMEEASSL 676
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 144/348 (41%), Gaps = 42/348 (12%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG + +TYN ++ ++ + ++ EMK+ G ++ T F K ++ +
Sbjct: 263 SGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLVRE 322
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A+KLF M P N++ S+ DG
Sbjct: 323 AMKLFAQMRVRGMMP---------------------------NEFT------YTSLVDGT 349
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+A GR D+A ++ M + G P+ +TY+ ++ GLCK G+ A +VL ME G
Sbjct: 350 CKA----GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGV 405
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+ +T LI GH +RAL +M K + D L LI G ++++ A
Sbjct: 406 KANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKS 465
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI--- 556
LL +M + LRP + T+++ A + EA+ LL + P + I
Sbjct: 466 LLHKM-DDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGL 524
Query: 557 SKFGTVEDA-SEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
K G++ +A S F K + P+ Y + + F G +A L+
Sbjct: 525 CKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLM 572
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 87/202 (43%), Gaps = 5/202 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P+ T++ VI LCK G +A + M+ GC PD+ T+ LI G+ E++ L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELL 256
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
++M + AD + LIN F + AY EM +++ + T T ++
Sbjct: 257 VSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEM-KRLGVMANVVTLSTFVDAFC 315
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKE-YPSSA 581
+ EAM L M+ + P + + K G ++DA L + + P+
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + + EG+ A D+L
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVL 397
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 146/362 (40%), Gaps = 58/362 (16%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
V AL R + E S K N + Y+ I+ L + D N+ EM+ +G +I TY
Sbjct: 234 VSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNC 293
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ F A +L + M++ P+V
Sbjct: 294 MIGGFCISGRWSAAQRLLQEMLERKISPNV------------------------------ 323
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
Y+ + A K G+F EA ++ M G P+ ITY+ +I G CK R +
Sbjct: 324 -------VTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++ M GC PD+ T+T LI G+C A +D + +M + A+ + LI+
Sbjct: 377 AEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIH 436
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
GF +N A L +MI + P T TL++ L +L++A+ + + M+K
Sbjct: 437 GFCLVGDLNAALDLSQQMISS-GVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQK---- 491
Query: 547 PFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKC 606
SK DAS + P Y + NEG+ EA++L +
Sbjct: 492 ----------SKMDL--DASHPFNGVE----PDVLTYNILICGLINEGKFLEAEELYEEM 535
Query: 607 PH 608
PH
Sbjct: 536 PH 537
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 121/288 (42%), Gaps = 14/288 (4%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + T+ ++ + + D ++ EM + G + TY + F + A
Sbjct: 388 GCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAA 447
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS------ 374
+ L + M+ P + C+ LL + +N L + + L S
Sbjct: 448 LDLSQQMISSGVCPDIVTCNTLLDGLC--DNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505
Query: 375 -----VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
Y+ + L G+F EAE++ + M + G PD ITYS +I GLCK R ++A
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
+ M P++ T+ LI G+C A VD L F +M + ADA + LI GF
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+NGA + EMI + P T + ++ LE A+ +L
Sbjct: 626 KVGNINGALDIFQEMISS-GVYPDTITIRNMLTGFWSKEELERAVAML 672
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 124/302 (41%), Gaps = 10/302 (3%)
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+K+ + + +EDA+ LF M+ PSV D + L+ ++ + PDL V + K
Sbjct: 50 LKLRSGSYEIKGLEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDL--VISLYQKM 107
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
E + + + + A + G PD +T++ ++ GLC R
Sbjct: 108 ERKQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRV 167
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
+A ++ ++ C PD+ T+T L+ G C V A+ +M+E D
Sbjct: 168 SEALDLFHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTF 223
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
++G A LL +M E ++P + +I+ L R ++ NL M+ +
Sbjct: 224 VDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKG 283
Query: 545 YPPFPEPFVQYISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAK 600
P + I F G A L+ L K P+ Y + +F EG+ +EA
Sbjct: 284 IFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAA 343
Query: 601 DL 602
+L
Sbjct: 344 EL 345
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 6/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKN-AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K+G A +++ M+ + +P+ + YS +I GLCK GR D+ N+ EM++ G
Sbjct: 226 GMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIF 285
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+I T+ +I G C + A +M+E+ + + LIN F+ + + A +L
Sbjct: 286 PNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAEL 345
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM+ + + P T+ ++I+ RL+ A ++ LM + P F I +
Sbjct: 346 YDEMLPR-GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYC 404
Query: 561 T---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDL 602
++D E L + + ++ Y + F G A DL
Sbjct: 405 GAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDL 450
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 9/253 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G NT+TYN ++ + ++ ++M G DI T + ++DA
Sbjct: 423 GLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDA 482
Query: 321 VKLFEFM------MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSL 371
+++F+ M +D + + + +L +I + G YE + G
Sbjct: 483 LEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVP 542
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + L K R DEA +M +M + F P+ +T++ +I G CKAGR +D +
Sbjct: 543 DTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELF 602
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM G + D + LI G ++ AL F +M+ D + ++ GF S+
Sbjct: 603 CEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSK 662
Query: 492 KRVNGAYKLLVEM 504
+ + A +L ++
Sbjct: 663 EELERAVAMLEDL 675
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 77/204 (37%), Gaps = 37/204 (18%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G + + +TYN ++ L + + EEM G D TY + K +++
Sbjct: 503 NGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDE 562
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M + P+V + L+ N Y
Sbjct: 563 ATQMFVSMGSKSFSPNVVTFNTLI------------------NGY--------------- 589
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K GR D+ ++ M G D I Y +I+G K G A ++ EM +G
Sbjct: 590 ----CKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGV 645
Query: 440 IPDIKTWTILIQGHCAANEVDRAL 463
PD T ++ G + E++RA+
Sbjct: 646 YPDTITIRNMLTGFWSKEELERAV 669
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 147/321 (45%), Gaps = 6/321 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G K N++TYN +++ + + + V +M++ G DI TY + K M
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
++A +L + M K + +LR++ D + + G + + Y
Sbjct: 424 DEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRR--GYFVDEVSYG 481
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K + +A ++ MK P ITY+ +I GLC+ G+ A + LDE+ E+
Sbjct: 482 TLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLES 541
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PD T+ +I G+C +V++A KM+EKN+ D + L+ G + + A
Sbjct: 542 GLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKA 601
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQ 554
KL I K + ++ T+I L +R EA +LL M+++ P +
Sbjct: 602 LKLFNTWISKGK-DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILG 660
Query: 555 YISKFGTVEDASEFLKALSVK 575
++ G ++DA EF+ ++ K
Sbjct: 661 GLTDAGRMKDAEEFISKIAEK 681
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 9/251 (3%)
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI-NNPDLGL 356
++ I Y+ R Q A ++F M +P++ C+ LL ++ ++ + L
Sbjct: 128 DISIGAYVACGRPHQ-------AAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRL 180
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
V + +G ++ + ++ + RF EA +++ M++ G PDNITY+ ++
Sbjct: 181 SKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILD 240
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
GLCK GR +A ++L +M+ G P+ T+ IL+ G C + A M + +
Sbjct: 241 GLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVP 300
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
DA +V+I+GF Q R+ A +L EM E ++L P T+ TLI EE L
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEM-ENLKLSPDVVTYNTLINGCFEHGSSEEGFKL 359
Query: 537 LRLMKKQNYPP 547
+ M+ + P
Sbjct: 360 IEEMEGRGMKP 370
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 111/253 (43%), Gaps = 5/253 (1%)
Query: 355 GLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQV 414
G RV K G Y+ I L K GR +EA ++ MKN G P+ T++ +
Sbjct: 214 GEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNIL 273
Query: 415 IFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY 474
+ G C+ G ++A NV++ M +N +PD T+ ++I G C + A+ +M
Sbjct: 274 VVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKL 333
Query: 475 DADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAM 534
D + LING +KL+ EM E ++P T+ +++ + +++E
Sbjct: 334 SPDVVTYNTLINGCFEHGSSEEGFKLIEEM-EGRGMKPNSVTYNVMVKWFVKKGKMDEVD 392
Query: 535 NLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAYLQ-VFESF 590
+R M++ P + IS K G +++A + + K L + +
Sbjct: 393 KTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRAL 452
Query: 591 FNEGRHYEAKDLL 603
E + EA DLL
Sbjct: 453 CRERKLDEAHDLL 465
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 148/325 (45%), Gaps = 10/325 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G N T+N ++ R +++ NV+E M + D TY + F K +
Sbjct: 259 KNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRI 318
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A++L E M + P V + L+ + + G F++ + E G + Y+
Sbjct: 319 AEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEG--FKLIEEMEGRGMKPNSVTYN 376
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + K G+ DE +K ++ M+ +G PD +TY+ +I CK G+ ++A ++DEM
Sbjct: 377 VMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRK 436
Query: 438 GCIPDIKTWTILIQGHCAANEVDRA--LLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G D T +++ C ++D A LLC A+ + Y D LI G+ ++ +
Sbjct: 437 GLKMDDVTLNTMLRALCRERKLDEAHDLLCSAR--RRGYFVDEVSYGTLIIGYFKHEKAS 494
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L EM EK + P T+ ++I L + +A++ L + + P +
Sbjct: 495 QALRLWDEMKEK-EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTI 553
Query: 556 ISKF---GTVEDASEFLKALSVKEY 577
I + G VE A +F + K +
Sbjct: 554 IHGYCQEGQVEKAFQFHNKMVEKNF 578
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 154/356 (43%), Gaps = 17/356 (4%)
Query: 247 VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIK 306
++ LG R G + ITYN IL L + + + +++ +MK +G + T+
Sbjct: 217 IRVLGKMR----DYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNI 272
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ + +++A + E M P ++++ + R+ + E+
Sbjct: 273 LVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCK--QGRIAEAMRLREEMEN 330
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
L S Y+ + + G +E K+++ M+ G +P+++TY+ ++ K G+ ++
Sbjct: 331 LKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDE 390
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ +MEE+GC+PDI T+ LI HC ++D A +M K D L+ ++
Sbjct: 391 VDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLR 450
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPW---QATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+++++ A+ LL R R + + ++ TLI + +A+ L MK++
Sbjct: 451 ALCRERKLDEAHDLLCS----ARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEK 506
Query: 544 NYPPFPEPFVQYIS---KFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGR 595
P + I+ + G A + L + L P Y + + EG+
Sbjct: 507 EIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 139/329 (42%), Gaps = 21/329 (6%)
Query: 121 DKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKA 180
+ + +P+S Y++M++ V K + + T+R+M+E C + TY +++ K K
Sbjct: 364 EGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKM 423
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
+ A + K + MD+V + L + +KL++ L
Sbjct: 424 DE--AFRLMDEMGRKGLKMDDVTLNTMLRALCRE------RKLDEAHDLLCSARRRGYFV 475
Query: 241 ELRIYPVKALGFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVV 289
+ Y +G+F+ + + ITYN ++ L + + +
Sbjct: 476 DEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKL 535
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+E+ + G D TY I + + +E A + M++ +KP V C+ LL +
Sbjct: 536 DELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCK- 594
Query: 350 NNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
L ++ N + S G + Y+ I +L K RF EA +++ M+ PD
Sbjct: 595 -EGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENG 438
TY+ ++ GL AGR +DA + ++ E G
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAEKG 682
>gi|225465635|ref|XP_002270253.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g08310, mitochondrial [Vitis vinifera]
gi|296085293|emb|CBI29025.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 108/491 (21%), Positives = 206/491 (41%), Gaps = 27/491 (5%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKL--DNDPEKASAFFNWVCDKKQFRPSSTVYSL 134
D + EL ++E+L +L ++ ++ + +KA F + K F P +VY
Sbjct: 285 DKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKSGFAPDVSVYDA 343
Query: 135 MLRNLVNKDSLKQFWVTLRRMKE--------------DHCYIEEETYLSILGVLKKAKKA 180
++ L K +++ L MKE +C E + Y I L+
Sbjct: 344 LIGGLCAKKEIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTE 403
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDD--KIGKKLEDMKIELSDNFVLTV 238
+ L N +G+V ++D A L+ + G ++ D ++ K ++ D ++
Sbjct: 404 AMLLLYNSVLNGLVNGKSVDK-AYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSI 462
Query: 239 LKELRIYPVK---ALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+ + K AL FR + G K N + YN ++ L+ + + + +++EMK
Sbjct: 463 VIDGLCNTGKLDLALSLFRDM-VRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGS 521
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G+ T+ I + + A+ + M ++P ++ +LL++ +
Sbjct: 522 GFRPTQFTHNSIFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEA 581
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
F E + Y K+ D+A ++ + + G+ PD + Y+ +I
Sbjct: 582 CNFLAEMVREGFLPDIV--AYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLI 639
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G CK R +A ++LDEM G +P + T+ +LI G C ++D+A C ++M+ K +
Sbjct: 640 NGFCKVKRVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKERE 699
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
+ LI+G + R + A L EM K P + +F LI L + A+
Sbjct: 700 PNVITYTTLIDGLCNAGRPDDAIHLWNEMRGK-GCSPNRISFIALIHGLCKCGWPDAALL 758
Query: 536 LLRLMKKQNYP 546
R M ++ P
Sbjct: 759 YFREMGERETP 769
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 131/278 (47%), Gaps = 30/278 (10%)
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L +++E+R++ G W+ KH T+ +++ L + + + N + EM +E
Sbjct: 547 LDMVREMRVH-----GHEPWI------KHYTL----LVKQLCKRKRSAEACNFLAEMVRE 591
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G+ DI Y F K + ++ A+++F + Y P V + L+ +
Sbjct: 592 GFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVK----- 646
Query: 356 LVFRVANKYESLGNSLSKSV------YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
RV+ ++ L ++K + Y+ + K G D+A + M EP+ I
Sbjct: 647 ---RVSEAHDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVI 703
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ +I GLC AGR +DA ++ +EM GC P+ ++ LI G C D ALL F +M
Sbjct: 704 TYTTLIDGLCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREM 763
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
E+ D + LI F+S K A+++L EM+ K
Sbjct: 764 GERE-TPDTIVYVALITSFISNKNPTLAFEILKEMVAK 800
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 132/612 (21%), Positives = 240/612 (39%), Gaps = 137/612 (22%)
Query: 110 EKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLS 169
E+A+ F+ V + P+S ++ +L + S+ + L+ M + ++ T S
Sbjct: 180 EEANLLFDQVKMMRLCVPNSYSFNCLLEAISKSGSIDLVEMRLKEMCDSGWEPDKYTLTS 239
Query: 170 ILGVLKKAKKASD-LAALNQFH-----DGMVKEIAMDNVAKTL-VDVVLGSDWDDKIGKK 222
+L ++K L+ N+ + DG V I + +K VD ++ ++
Sbjct: 240 VLQAYCNSRKFDKALSVFNEIYGRGWVDGHVLSILVLTFSKCGEVDKAF------ELIER 293
Query: 223 LEDMKIELSD-NFVLTVLKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ED+ I L++ F + + +R V KAL F+ + + SG+ + Y+ ++ L +
Sbjct: 294 MEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKSGFAPDVSVYDALIGGLCAKK 352
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKI----SRQFQKFRMMEDAVK---------LFEFM 327
+ +++ EMK+ G + DI K+ S + +R++E+ ++ L+ +
Sbjct: 353 EIEKALHLLSEMKELGIDPDIQILSKLIAYCSEEVDIYRLIEERLEDLDTEAMLLLYNSV 412
Query: 328 MDGPYKP-SVQDCSLLLRSISSINNPD--------------------------------- 353
++G SV LLR+++ N D
Sbjct: 413 LNGLVNGKSVDKAYYLLRAMTGDNYTDNFEVNKFFMVKEMVRPDTTSFSIVIDGLCNTGK 472
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L + +G + +Y+ + L+ R +E ++K MK +GF P T++
Sbjct: 473 LDLALSLFRDMVRVGCKQNVLLYNNLIDKLSNSNRLEECYLLLKEMKGSGFRPTQFTHNS 532
Query: 414 VIFG------------------------------------LCKAGRFEDACNVLDEMEEN 437
IFG LCK R +ACN L EM
Sbjct: 533 -IFGCLCRREDVTGALDMVREMRVHGHEPWIKHYTLLVKQLCKRKRSAEACNFLAEMVRE 591
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +PDI ++ I G VD+AL F + + Y D + LINGF KRV+ A
Sbjct: 592 GFLPDIVAYSAAIDGFVKIKAVDQALEIFRDICARGYCPDVVAYNTLINGFCKVKRVSEA 651
Query: 498 YKLLVEMIEKVRL----------------------------------RPWQATFKTLIEK 523
+ +L EM+ K + P T+ TLI+
Sbjct: 652 HDILDEMVAKGLVPSVVTYNLLIDGWCKNGDIDQAFHCLSRMVGKEREPNVITYTTLIDG 711
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKALSVKEYPSS 580
L A R ++A++L M+ + P F+ I K G + A + + + +E P +
Sbjct: 712 LCNAGRPDDAIHLWNEMRGKGCSPNRISFIALIHGLCKCGWPDAALLYFREMGERETPDT 771
Query: 581 AAYLQVFESFFN 592
Y+ + SF +
Sbjct: 772 IVYVALITSFIS 783
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 47/341 (13%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL--AR 278
++L + L+ V VL L+ + + A FF W + G+ HN TYN + L AR
Sbjct: 84 QELRNFGSMLTHEVVENVLSGLKSWKI-AYRFFNWASDQGGFNHNCYTYNAMASCLSHAR 142
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ + MDI + M A+ F + V++
Sbjct: 143 QNAPLSLLS-----------MDIVN--------SRCAMSPGALGFFIRCLGS--TGLVEE 181
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+LL + + V N Y ++ + A++K G D E +K
Sbjct: 182 ANLLFDQVKMMR-------LCVPNSYS----------FNCLLEAISKSGSIDLVEMRLKE 224
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M ++G+EPD T + V+ C + +F+ A +V +E+ G + D +IL+ E
Sbjct: 225 MCDSGWEPDKYTLTSVLQAYCNSRKFDKALSVFNEIYGRGWV-DGHVLSILVLTFSKCGE 283
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
VD+A +M + + VLI+GF+ Q RV+ A +L +M +K P + +
Sbjct: 284 VDKAFELIERMEDLGIRLNEKTFCVLIHGFVRQSRVDKALQLFKKM-QKSGFAPDVSVYD 342
Query: 519 TLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LI L + +E+A++LL MK+ +P +Q +SK
Sbjct: 343 ALIGGLCAKKEIEKALHLLSEMKELGI----DPDIQILSKL 379
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 138/295 (46%), Gaps = 8/295 (2%)
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
++ +A K F+ +++ S C+L L +SS + LG+V +V +++ LG +
Sbjct: 54 LLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDM-LGMVLKVFSEFPQLGVCWNTES 112
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + +L +LG+ EA ++ M+ G PD ++Y+ +I G C G + ++ EM+
Sbjct: 113 YNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEMQ 172
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P++ T++ +I C + +V +MM++ D + LI+GF
Sbjct: 173 LKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQ 232
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
AYKL EM E + P F LI L G+ ++ EA L M K+ + P +
Sbjct: 233 AAYKLFSEM-EAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTAL 291
Query: 556 I---SKFGTVEDASEFL--KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I K G ++ A FL + + + P+ Y + + G A +LL++
Sbjct: 292 IDGYCKLGEMKKAF-FLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 138/334 (41%), Gaps = 42/334 (12%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K N TY+ I+ +L + V + V+ EM K G D Y + F K + A
Sbjct: 175 GLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAA 234
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
KLF M P SI+ + +L LS S
Sbjct: 235 YKLFSEMEAREIVPD---------SIA----------------FSALICGLSGS------ 263
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
G+ EA+K+ M GFEPD +TY+ +I G CK G + A + ++M + G
Sbjct: 264 ------GKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLT 317
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+T L G C + E+D A +M K + + ++NG + A KL
Sbjct: 318 PNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKL 377
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYIS 557
+ EM E L P T+ TL++ + +A LLR M + P F + +
Sbjct: 378 MEEMKE-AGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLC 436
Query: 558 KFGTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
G +ED LK + K P++A Y + + +
Sbjct: 437 MSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 157/387 (40%), Gaps = 54/387 (13%)
Query: 218 KIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK-----------HNT 266
K GK +E K+ L + V + IY GF + + YK ++
Sbjct: 192 KSGKVVEGEKV-LREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDS 250
Query: 267 ITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
I ++ ++ L+ V + + EM K+G+E D TY + + K M+ A L
Sbjct: 251 IAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQ 310
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRALT 384
M+ P+V + L + D L+ + K G L+ S Y+ I L
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRK----GLQLNISTYNTIVNGLC 366
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQ------------------------------V 414
K G +A K+M+ MK AG PD ITY+ V
Sbjct: 367 KAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVV 426
Query: 415 IF-----GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
F GLC +G+ ED +L M E G +P+ T+ +++ +C N + + + M
Sbjct: 427 TFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGM 486
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARR 529
+ D++ ++LI G + + A+ L EM+EK R +++ LI+ ++
Sbjct: 487 CAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEK-RFNLTASSYNALIKGFFKRKK 545
Query: 530 LEEAMNLLRLMKKQNYPPFPEPFVQYI 556
L EA L M+++ E + ++
Sbjct: 546 LLEARQLFEEMRREGLVASAEIYNLFV 572
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 162/395 (41%), Gaps = 25/395 (6%)
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
K +P+ YS ++ L + + LR M + + + Y +++ K +
Sbjct: 174 KGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGF--CKLGNT 231
Query: 183 LAALNQFHDGMVKEIAMDNVA-KTLVDVVLGSD--------WDDKIGKKLEDMKIELSDN 233
AA F + +EI D++A L+ + GS +++ I K E D
Sbjct: 232 QAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE------PDE 285
Query: 234 FVLTVLKE--LRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
T L + ++ +K F G N +TY + L + + ++ E
Sbjct: 286 VTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHE 345
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
M ++G +++I TY I K + AVKL E M + P + L+ +
Sbjct: 346 MCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGE 405
Query: 352 PDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNI 409
+V E L L +V ++ + L G+ ++ E+++K M G P+
Sbjct: 406 ----MVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAA 461
Query: 410 TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
TY+ ++ C + + M G +PD T+ ILI+GHC A + A +M
Sbjct: 462 TYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEM 521
Query: 470 MEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+EK ++ A + LI GF +K++ A +L EM
Sbjct: 522 VEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEM 556
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N TYN I+ L + ++ ++EEMK+ G D TY + + K M A
Sbjct: 350 GLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKA 409
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+L M+D +P+V ++L+ + + G R+ G + + Y+ I
Sbjct: 410 RELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE--RLLKWMLEKGIMPNAATYNSIM 467
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ + ++ + M G PD+ TY+ +I G CKA ++A + EM E
Sbjct: 468 KQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFN 527
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
++ LI+G ++ A F +M + A A++ ++ ++ + + +L
Sbjct: 528 LTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMETTLEL 587
Query: 501 LVEMIEKVRL 510
E IEK L
Sbjct: 588 CDEAIEKCLL 597
>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
Length = 703
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 180/436 (41%), Gaps = 62/436 (14%)
Query: 126 RPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAA 185
RP+ Y++ML L K+ RM ++ + TY ++ L ++ A
Sbjct: 261 RPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAAR 320
Query: 186 LNQ--FHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELR 243
+ G+V + AM N +LV + G+ E K S F L+ LR
Sbjct: 321 VYSEIIKTGLVIDAAMYN---SLVKGFC------QAGRVQEAWKFWDSAGF--AGLRNLR 369
Query: 244 IYPVKALGFFR----------W--VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEE 291
Y + G F W + + +T+T+ ++ L ++ + + EE
Sbjct: 370 TYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEE 429
Query: 292 MKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN 351
+ G ++D+ +Y + + DAVK++E M KP+
Sbjct: 430 ARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPN---------------- 473
Query: 352 PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
+Y+ + ++ R +A ++ M + G P ITY
Sbjct: 474 ---------------------SHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITY 512
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ +I GLCKA ++++A +V EM ENG PDI T+ LI+G + ++D AL + +++
Sbjct: 513 NTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILY 572
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLE 531
K D + ++LI+G S +V+ A + +M EK P T+ TL++ L ++
Sbjct: 573 KGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYID 632
Query: 532 EAMNLLRLMKKQNYPP 547
+A L + + P
Sbjct: 633 KAATLWTSITEDGLEP 648
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 194/476 (40%), Gaps = 33/476 (6%)
Query: 89 LSPKLTHESVVYVLRKL--DNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLK 146
++P L ++V LR L D ++A F+ + ++Q P YS ++ L +D L
Sbjct: 154 IAPNLQTYNIV--LRSLCARGDLDRAVTLFDSL-RRRQVAPDRITYSTLMCGLAKQDRLD 210
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE---------- 196
L M + Y ++LG KA + + + D +VK+
Sbjct: 211 HALDLLDEMPRSRVQPDVVCYNALLG---GCFKAGEFEKVMRVWDKLVKDPGARPNLATY 267
Query: 197 -IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRW 255
+ +D + K +G W+ + L+ D +L G R
Sbjct: 268 NVMLDGLCKFGRFKEVGEVWERMVANNLQ------PDVITYGILIHGLCRSGDVDGAARV 321
Query: 256 VGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
E +G + YN +++ + V++ W + G ++ TY + +
Sbjct: 322 YSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFD 380
Query: 314 FRMMEDAVKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
M+++A++L++ + D P L+ + N F + + G L
Sbjct: 381 SGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLC--QNGFANKAFTIFEEARVSGKQLD 438
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
Y + L +GR +A K+ + M G +P++ Y+ +I G C+ R DA +
Sbjct: 439 VFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYS 498
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+M +NGC P + T+ LI G C A + A +M+E + D LI G S K
Sbjct: 499 KMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDK 558
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK-KQNYPP 547
+++ A + +++ K L+ LI L A +++EA+++ MK K+N PP
Sbjct: 559 KIDDALSIWKQILYK-GLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPP 613
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 3/194 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G ITYN ++ L + E ++ +V EM + G+ DI TY + R + ++D
Sbjct: 503 NGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDD 562
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDG 378
A+ +++ ++ K V ++L+ + S D L VF + ++ +L Y+
Sbjct: 563 ALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLV--TYNT 620
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L + G D+A + ++ G EPD I+Y+ I GLC R + +LDE+ G
Sbjct: 621 LMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRG 680
Query: 439 CIPDIKTWTILIQG 452
IP + TW IL++
Sbjct: 681 IIPTVITWNILVRA 694
>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Brachypodium distachyon]
Length = 897
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 131/300 (43%), Gaps = 4/300 (1%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + TY+G++ + ++ ++++M G + + DTY + + K E
Sbjct: 555 GLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKV 614
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ KP +++R++S N + + F V + E G +Y +
Sbjct: 615 SSILQSMLGSGDKPDNHIYGIVIRNLSRSEN--MEVAFMVLTEVEKNGLVPDLHIYSSLI 672
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K+ ++A ++ M G EP + Y+ +I G C++G A NV D + G +
Sbjct: 673 SGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLL 732
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P+ T+T LI G+C ++ A + M+++ DA + +VL G + A L
Sbjct: 733 PNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFL 792
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM R + F TL+ RL+E LL +M + P + I++FG
Sbjct: 793 TEEMFN--RGYAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFG 850
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 7/343 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN ++ L R +V + + EEM G D TY + K +++A L
Sbjct: 279 NEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALL 338
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M KP+V + L+ + F + N+ S G +K +YD + R L
Sbjct: 339 DEMSCSGLKPNVVVYATLVDGF--MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLC 396
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K+G+ A K++ M G PD TY ++ G + + A +L+EM +G +P+
Sbjct: 397 KIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAY 456
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ I+I G C E A +M+ + +A + LI G + ++ A + L E
Sbjct: 457 TYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESL-EN 515
Query: 505 IEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGT 561
+ K + P + +LI+ L R+EEA ++K+ P + I K
Sbjct: 516 MTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRN 575
Query: 562 VEDASEFLKA-LSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+E A + L+ L+ P++ Y + E +F H + +L
Sbjct: 576 LEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSIL 618
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 192/490 (39%), Gaps = 59/490 (12%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKASDLAA 185
P + Y ++ L LK+ L M Y +++ G +K+ K A
Sbjct: 313 PDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDI 372
Query: 186 LNQFHDGMVK--EIAMDNVAKTLVDVVLGSDWDDKIGK--KLEDMKIELS---DNFVLTV 238
LN+ V+ +I DN+ + L + ++G+ KL + I++ D F
Sbjct: 373 LNEMISAGVQPNKIMYDNLIRGLCKI-------GQLGRASKLLNEMIKVGHRPDTFTYHP 425
Query: 239 LKELRIYPVKALGFFRWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEG 296
L + G F + E +SG N TY ++ L ++ ++ N++EEM EG
Sbjct: 426 LMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEG 485
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
+ + Y + K + A + E M K +V PDL
Sbjct: 486 LKPNAFMYAPLIIGHSKEGHISLACESLENMT----KANVL--------------PDL-- 525
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
Y+ + + L+ +GR +EAE+ ++ G PD TYS +I
Sbjct: 526 -----------------FCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK E A +L +M +G P+ T+T L++G+ +N+ ++ M+
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
D + ++I + + A+ +L E +EK L P + +LI L +E+A+ L
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTE-VEKNGLVPDLHIYSSLISGLCKMADMEKAVGL 687
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFN 592
L M K+ P + I F D S F L+ P+ Y + +
Sbjct: 688 LDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCK 747
Query: 593 EGRHYEAKDL 602
G +A DL
Sbjct: 748 NGDITDAFDL 757
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 135/312 (43%), Gaps = 4/312 (1%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+A GF + ++ G + TY ++ L + +++ +++EM G + ++ Y +
Sbjct: 298 EAFGFKEEMVDY-GLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K +A + M+ +P+ L+R + I LG ++ N+ +
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQ--LGRASKLLNEMIKV 414
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G+ Y + + + D A +++ M+N+G P+ TY +I GLC+ G ++A
Sbjct: 415 GHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEA 474
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
N+L+EM G P+ + LI GH + A M + N D + LI G
Sbjct: 475 GNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534
Query: 488 FLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+ R+ A + + ++K L P + T+ LI R LE+A LL+ M P
Sbjct: 535 LSTVGRIEEAEEYYAQ-VQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKP 593
Query: 548 FPEPFVQYISKF 559
+ + + +
Sbjct: 594 NADTYTDLLEGY 605
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 113/278 (40%), Gaps = 38/278 (13%)
Query: 270 NGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD 329
NG+L+ L R +++ W + M+ G D+ TY K R + A K+FE M
Sbjct: 214 NGLLKDLLRADAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEM-- 271
Query: 330 GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
+DC++ ++ Y+ + L + G
Sbjct: 272 -----RRRDCAM------------------------------NEVTYNVMISGLCRSGAV 296
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
+EA + M + G PD TY ++ GLCK GR ++A +LDEM +G P++ + L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
+ G + A +M+ + + D LI G ++ A KLL EMI KV
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMI-KVG 415
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
RP T+ L++ + A LL M+ P
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILP 453
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 131/319 (41%), Gaps = 16/319 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
E +G + TY+ L H RDF V EEM++ M+ TY + +
Sbjct: 237 EGAGIPPDVYTYSTFLEA---HCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRS 293
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
+E+A E M+D P L+ + L + ++ G +
Sbjct: 294 GAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGR--LKEAKALLDEMSCSGLKPNVV 351
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
VY + K G+ EA ++ M +AG +P+ I Y +I GLCK G+ A +L+EM
Sbjct: 352 VYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEM 411
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G PD T+ L+QGH + D A +M +A ++ING
Sbjct: 412 IKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGES 471
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
A LL EMI + L+P + LI + A L M K N P+ F
Sbjct: 472 KEAGNLLEEMISE-GLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANV--LPDLFCY 528
Query: 553 ---VQYISKFGTVEDASEF 568
++ +S G +E+A E+
Sbjct: 529 NSLIKGLSTVGRIEEAEEY 547
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 107/254 (42%), Gaps = 15/254 (5%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + Y ++R L+R E++ + V+ E++K G D+ Y + K ME
Sbjct: 624 SGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEK 683
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---- 375
AV L + M +P + + L+ G + R N ++S+ L+K +
Sbjct: 684 AVGLLDEMAKEGLEPGIVCYNALIDGFCRS-----GDISRARNVFDSI---LAKGLLPNC 735
Query: 376 --YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
Y + K G +A + K M + G PD Y+ + G A E A + +E
Sbjct: 736 VTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEE 795
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
M G + ++ L++G C + MM++ +A ++ +I F +
Sbjct: 796 MFNRG-YAHVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGK 854
Query: 494 VNGAYKLLVEMIEK 507
+ A+++ E+ +K
Sbjct: 855 LCEAHRVFAELQQK 868
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 5/234 (2%)
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+V D + K G A +++ M + G P + ++ L +A E +
Sbjct: 176 AVLDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGF 235
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
ME G PD+ T++ ++ HC A + D A F +M ++ + +V+I+G
Sbjct: 236 MEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 295
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFV 553
V A+ EM++ L P T+ L+ L RL+EA LL M P +
Sbjct: 296 VEEAFGFKEEMVD-YGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYA 354
Query: 554 QYISKF---GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +A + L + +S P+ Y + G+ A LL
Sbjct: 355 TLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLL 408
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
KA+G + + G + + YN ++ R + NV + + +G + TY +
Sbjct: 683 KAVGLLDEMAKE-GLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTAL 741
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
K + DA L++ M+D P ++L S + DL + + +
Sbjct: 742 IDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCS--DAADLEQALFLTEEMFNR 799
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + S++ + R K GR E EK++ M + P+ T VI KAG+ +A
Sbjct: 800 GYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEA 858
Query: 428 CNVLDEMEE 436
V E+++
Sbjct: 859 HRVFAELQQ 867
>gi|147792816|emb|CAN68810.1| hypothetical protein VITISV_001082 [Vitis vinifera]
Length = 577
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 160/333 (48%), Gaps = 22/333 (6%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK-ALGFFRWVGEHSGYKHNTITYNGIL 273
+ D I K L ++ +L + V VL + + L FF W G S Y+H++ Y+
Sbjct: 38 YGDNIEKTLPAVRAKLDSSCVNEVLNRCSLTQSQLGLRFFIWAGVQSYYRHSSYLYSKAC 97
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+ +++ R +V+E + EG + + T+ + ++ ++ ++A+ + + M + +
Sbjct: 98 ELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIR 157
Query: 334 PSVQDCSLLLRSISSINNPDL--GLV--FRVANKYESLGNSLSKSVYDGIHRALTKLGRF 389
+ ++R + DL GL+ + + Y ++ Y + + +GR
Sbjct: 158 ADTVAYNSVIRLFCEKGDMDLAAGLMKEMGLIDLYPNM------ITYVTMIKGFCNVGRL 211
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME-ENG-CIPDIKTWT 447
++A K+ K MK G P+ + Y+ ++ G+C+ G E A +L EME E+G C P++ T+T
Sbjct: 212 EDACKLFKVMKGHGCSPNVVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYT 271
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+IQ C ++ AL +M + + +L+ GF ++ RV A+KL I+K
Sbjct: 272 SMIQSCCEKGKLMEALEILDRMRACGCAPNRVTVSILMKGFCAEGRVEEAFKL----IDK 327
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
V + ++ L +K R EA+ L RLM
Sbjct: 328 V-VAGGNVSYVGLSQK----RHSVEAVKLARLM 355
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 7/181 (3%)
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
+V++ G + +KT+ +++ A D AL KM E N AD + +I F
Sbjct: 111 DVIEAYRVEGTVVSVKTFNVVLHLLREAKLADEALWILKKMAEFNIRADTVAYNSVIRLF 170
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP- 547
+ ++ A L+ EM + L P T+ T+I+ RLE+A L ++MK P
Sbjct: 171 CEKGDMDLAAGLMKEM-GLIDLYPNMITYVTMIKGFCNVGRLEDACKLFKVMKGHGCSPN 229
Query: 548 --FPEPFVQYISKFGTVEDASEFLKAL---SVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ + +FG++E A E L + S P+ Y + +S +G+ EA ++
Sbjct: 230 VVVYTVILDGVCRFGSLERALELLGEMEKESGDCSPNVVTYTSMIQSCCEKGKLMEALEI 289
Query: 603 L 603
L
Sbjct: 290 L 290
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,251,695,015
Number of Sequences: 23463169
Number of extensions: 375307936
Number of successful extensions: 1100577
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5187
Number of HSP's successfully gapped in prelim test: 3041
Number of HSP's that attempted gapping in prelim test: 1000591
Number of HSP's gapped (non-prelim): 45942
length of query: 639
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 490
effective length of database: 8,863,183,186
effective search space: 4342959761140
effective search space used: 4342959761140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)