BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037477
(639 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9STK5|PP269_ARATH Pentatricopeptide repeat-containing protein At3g48250,
chloroplastic OS=Arabidopsis thaliana GN=At3g48250 PE=2
SV=1
Length = 621
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/630 (54%), Positives = 455/630 (72%), Gaps = 17/630 (2%)
Query: 1 MNRSKAVLSSLRLANSLLSIRSSSTRPLFTRVTHFFHISSFTASNQSHTSQFHINTCQKI 60
M RS A+LSSLR A S +S RS +R ++V F+++ S F I + +
Sbjct: 1 MYRSMAILSSLRHAYSQISTRSYLSR---SKV-------GFSSNLSSPLDSFAIVPSRFL 50
Query: 61 F----FSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFF 116
+ FS+ P+S L+L+L DWS E+E L + LTHE+ +YVLRKL+ PEKA F
Sbjct: 51 WKFRTFSSKPDSMLQLVLENDWSKEVEEGLRKPDMSLTHETAIYVLRKLEKYPEKAYYFL 110
Query: 117 NWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKK 176
+WV PS+ +YS+MLR LV + S+K+FW+TLR MK+ Y++E+TY +I G L K
Sbjct: 111 DWVLRDSGLSPSTPLYSIMLRILVQQRSMKRFWMTLREMKQGGFYLDEDTYKTIYGELSK 170
Query: 177 AKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVL 236
K +D A+ F++ M+KE AM VA + VV DW ++ ++L++MK+ LSDNFV+
Sbjct: 171 EKSKADAVAVAHFYERMLKENAMSVVAGEVSAVVTKGDWSCEVERELQEMKLVLSDNFVI 230
Query: 237 TVLKELRIYPVKALGFFRWVGEHSG---YKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
VLKELR +P+KAL FF WVG Y+H+T+TYN LRVLAR SV +FW+VV+EMK
Sbjct: 231 RVLKELREHPLKALAFFHWVGGGGSSSGYQHSTVTYNAALRVLARPNSVAEFWSVVDEMK 290
Query: 294 KEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD 353
GY+MD+DTYIK+SRQFQK RMM + VKL+E+MMDGP+KPS+QDCSLLLR +S NPD
Sbjct: 291 TAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPD 350
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L LVFRV+ KYES G SLSK+VYDGIHR+LT +GRFDEAE++ KAM+NAG+EPDNITYSQ
Sbjct: 351 LDLVFRVSRKYESTGKSLSKAVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQ 410
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++FGLCKA R E+A VLD+ME GC PDIKTWTILIQGHC NE+D+AL CFA M+EK
Sbjct: 411 LVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKG 470
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
+D D++LLDVLI+GF+ + GA L+EM++ ++PWQ+T+K LI+KLL ++ EEA
Sbjct: 471 FDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSEEA 530
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNE 593
++LL++MKKQNYP + E F Y++KFGT+EDA +FL LS K+ PS AAY V E+F+ E
Sbjct: 531 LDLLQMMKKQNYPAYAEAFDGYLAKFGTLEDAKKFLDVLSSKDSPSFAAYFHVIEAFYRE 590
Query: 594 GRHYEAKDLLYKCPHHIRQDSKISLLFGSA 623
GR +AK+LL+ CPHH + KIS LFG+A
Sbjct: 591 GRLTDAKNLLFICPHHFKTHPKISELFGAA 620
>sp|Q9M891|PP208_ARATH Pentatricopeptide repeat-containing protein At3g02490,
mitochondrial OS=Arabidopsis thaliana GN=At3g02490 PE=2
SV=1
Length = 665
Score = 319 bits (817), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 191/639 (29%), Positives = 337/639 (52%), Gaps = 31/639 (4%)
Query: 23 SSTRPLFTRVTHFFHISSFTASNQSHTSQ-FHINTCQKIFFSTSPNSS------------ 69
SS RP + + F IS+ T S S + F + Q +F SP +S
Sbjct: 15 SSPRPFLSHHSRFQVISNSTRSFSSFLHERFGVQQRQCLFALRSPLASSVSRRFSSESAI 74
Query: 70 ----------LELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWV 119
+++ + DE+ +L+ ++HE + VLR+L++ P+ A FF W
Sbjct: 75 EEKLPAETVVIDVFSRLNGKDEITKELDSNDVVISHELALRVLRELESSPDVAGRFFKWG 134
Query: 120 CDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
+ + SS Y+ MLR + +FW + MK+ + + KK
Sbjct: 135 LEAYPQKLSSKSYNTMLRIFGVNGLVDEFWRLVDDMKKKGHGVSANVRDRVGDKFKKDGL 194
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVL 239
+DL L + + ++D V + +V+ W + K+L D+K+E + V VL
Sbjct: 195 ENDLERLKELFASGSMDNSVDKVCNRVCKIVMKEVWGADVEKQLRDLKLEFKSDVVKMVL 254
Query: 240 KELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
++L + P KAL FFRW+ E +KH+ TYN + RVL + + + F +++EE++ GYEM
Sbjct: 255 EKLDVDPRKALLFFRWIDESGSFKHDEKTYNAMARVLGKEKFLDRFQHMIEEIRSAGYEM 314
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK--PSVQDCSLLLRSISSINNPDLGLV 357
+++TY+++S +F + +M+++AV+LFEF M G P+ CSLLL+ I + D+ L
Sbjct: 315 EMETYVRVSARFCQTKMIKEAVELFEFAMAGSISNTPTPHCCSLLLKKIVTAKKLDMDLF 374
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
R Y GN + + + ++L + RF ++ +++KAM G+ P S + G
Sbjct: 375 TRTLKAYTGNGNVVPDVMLQHVLKSLRSVDRFGQSNEVLKAMNEGGYVPSGDLQSVIASG 434
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDAD 477
L + G+ ++A +++ ME +G D K L++GHC A +++ A CF KM+ K +
Sbjct: 435 LSRKGKKDEANELVNFMEASGNHLDDKAMASLVEGHCDAKDLEEASECFKKMIGKEGVSY 494
Query: 478 ADL-LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLE 531
A + L+ + + + YKL E++++ +L+PW +T+K ++ LL + E
Sbjct: 495 AGYAFEKLVLAYCNSFQARDVYKLFSELVKQNQLKPWHSTYKIMVRNLLMKKVARDGGFE 554
Query: 532 EAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
EA++LL +M+ +PPF +PF+ Y+S GT +A FLKA++ K++PS++ L+VFE+
Sbjct: 555 EALSLLPMMRNHGFPPFVDPFMDYLSNSGTSAEAFAFLKAVTSKKFPSNSMVLRVFEAML 614
Query: 592 NEGRHYEAKDLLYKCPHHIRQDSKISLLFGSAKSNKVTI 630
RH EA+DLL P +IR+++++ LF + K K ++
Sbjct: 615 KSARHSEAQDLLSMSPSYIRRNAEVLELFNTMKPEKCSL 653
>sp|Q8LPF1|PP387_ARATH Pentatricopeptide repeat-containing protein At5g15980,
mitochondrial OS=Arabidopsis thaliana GN=At5g15980 PE=2
SV=1
Length = 668
Score = 310 bits (795), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 174/560 (31%), Positives = 304/560 (54%), Gaps = 9/560 (1%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
DE+ +LE ++ + + VLRKL+++P+ A +FF W+ + SS Y++MLR L
Sbjct: 101 DEIRKELESSGVVISQDLALKVLRKLESNPDVAKSFFQWIKEASPEELSSKNYNMMLRIL 160
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
+ +FW + MK+ + + +K SDL L + + +
Sbjct: 161 GGNGLVDEFWGLVDVMKKKGHGLSANVRDKVGDKFQKDGLESDLLRLRKLFTSDCLDNSA 220
Query: 200 DNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEH 259
+NV + +V+ +W D + K++ D+ +E + V +++ L + P KAL FFRW+ E
Sbjct: 221 ENVCDRVCKIVMKEEWGDDVEKRVRDLNVEFKSDLVKMIVERLDVEPRKALLFFRWIDES 280
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+KH+ TYN + RVL + + + F N+V EM+ GYE++I+TY+++S +F + +++++
Sbjct: 281 DLFKHDEKTYNAMARVLGKEKFLDRFQNIVVEMRSAGYEVEIETYVRVSTRFCQTKLIKE 340
Query: 320 AVKLFEFMMDGPY---KPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
AV LFE M G P+ LLL+ I + D+ L R Y GN+L+ S+
Sbjct: 341 AVDLFEIAMAGSSSSNNPTPHCFCLLLKKIVTAKILDMDLFSRAVKVYTKNGNALTDSLL 400
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ ++L + R +++ +++K MK G+ P S + L + G+ ++A +D ME
Sbjct: 401 KSVLKSLRSVDRVEQSNELLKEMKRGGYVPSGDMQSMIASSLSRKGKKDEADEFVDFMES 460
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL-LDVLINGFLSQKRVN 495
+G D K L++G+C + +D AL+CF KM+ + AD + L+ + ++ +V
Sbjct: 461 SGNNLDDKAMASLVEGYCDSGNLDEALVCFEKMVGNTGVSYADYSFEKLVLAYCNKNQVR 520
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR-----RLEEAMNLLRLMKKQNYPPFPE 550
AYKLL + K +L+P +T+K+L+ LL + EEA++LL +MK +PPF +
Sbjct: 521 DAYKLLSAQVTKNQLKPRHSTYKSLVTNLLTKKIARDGGFEEALSLLPIMKDHGFPPFID 580
Query: 551 PFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHI 610
PF+ Y S G +A FLKA++ +P + L+VFE+ RH EA+DLL CP++I
Sbjct: 581 PFMSYFSSTGKSTEALGFLKAMTSNNFPYISVVLRVFETMMKSARHSEAQDLLSLCPNYI 640
Query: 611 RQDSKISLLFGSAKSNKVTI 630
R + + LF + K N+ +
Sbjct: 641 RNNPDVLELFNTMKPNESAV 660
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 129 bits (325), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 94/349 (26%), Positives = 159/349 (45%), Gaps = 11/349 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T + ++ + V D ++V +M++ G+ D+ Y I K ++ DA
Sbjct: 134 GYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDA 193
Query: 321 VKLFEFM-MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
V+LF+ M DG +V SL+ S D + R + + N ++ + +
Sbjct: 194 VELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT---FTAV 250
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G+F EA K+ + M +PD TY+ +I GLC GR ++A +LD M GC
Sbjct: 251 IDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
+PD+ T+ LI G C + VD F +M ++ D + +I G+ R + A
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 369
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYI 556
E+ ++ RP T+ L+ L R+E+A+ L M+K + + +
Sbjct: 370 ---EIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGM 426
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K G VEDA + ++LS K S F R ++ DLLY+
Sbjct: 427 CKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYR 475
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 7/291 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+E+ + LF M+ PS+ D S +L I+ N DL V + + E G Y
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDL--VISLFHHMEVCGIGHDLYSY 107
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + L + RF A ++ M G+EPD +T S +I G C+ R DA +++ +MEE
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEE 167
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD+ + +I G C V+ A+ F +M ADA + L+ G R +
Sbjct: 168 MGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSD 227
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFV 553
A +L+ +M+ + + P TF +I+ + + EAM L M ++ P +
Sbjct: 228 AARLMRDMVMR-DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI 286
Query: 554 QYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLL 603
+ G V++A + L + K P Y + F R E L
Sbjct: 287 NGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 149/354 (42%), Gaps = 51/354 (14%)
Query: 125 FRPSSTVYSLMLRN-----LVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKK 179
FRP +Y+ ++ LVN D+++ F RM+ D + TY S++ L + +
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVN-DAVELF----DRMERDGVRADAVTYNSLVAGLCCSGR 224
Query: 180 ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKI--ELSDNFVLT 237
SD A L ++++ M ++ ++ D K GK E MK+ E++ V
Sbjct: 225 WSDAARL-------MRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCV-- 275
Query: 238 VLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGY 297
+ TYN ++ L H V + +++ M +G
Sbjct: 276 -------------------------DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGC 310
Query: 298 EMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV 357
D+ TY + F K + +++ KLF M + +++ PD
Sbjct: 311 LPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ- 369
Query: 358 FRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+ ++ +S N + S+ + L R ++A + + M+ + E D TY+ VI G
Sbjct: 370 -EIFSRMDSRPNIRTYSI---LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHG 425
Query: 418 LCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+CK G EDA ++ + G PD+ ++T +I G C + D++ L + KM E
Sbjct: 426 MCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
>sp|Q9C9A2|PP112_ARATH Pentatricopeptide repeat-containing protein At1g71060,
mitochondrial OS=Arabidopsis thaliana GN=At1g71060 PE=2
SV=1
Length = 510
Score = 127 bits (320), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 212/467 (45%), Gaps = 45/467 (9%)
Query: 179 KASDLAALNQFHDGMVK-EIAMDNVAKTLVDV--VLGSDWDDKIGKKLEDMKIELSDNFV 235
KAS+ FH V+ +++ ++ ++ + +L D K+ L + ++LS +
Sbjct: 38 KASNFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALI 97
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
VLK+L V AL F+W G+KH T YN ++ L + + + W++V++MK +
Sbjct: 98 EEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK 157
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSIS-SINNPDL 354
+ +T+ ISR++ + R +++A+ F M + +K D + +L ++S S N D
Sbjct: 158 KL-LSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDA 216
Query: 355 GLVFRVANKYESLGNSLSKSVY-DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
VF K + S ++ +G + L L R DE + MK+ GFEPD + Y
Sbjct: 217 QKVFDKMKKKRFEPDIKSYTILLEGWGQELNLL-RVDEVNR---EMKDEGFEPDVVAYGI 272
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
+I CKA ++E+A +EME+ C P + LI G + +++ AL F +
Sbjct: 273 IINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSG 332
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK----------------VRLR------ 511
+ +A + L+ + +R+ AYK + EM K +R++
Sbjct: 333 FPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY 392
Query: 512 ---------PWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
P +T++ ++ RL+ A+ + MK + P F I+
Sbjct: 393 EVYQTMSCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHE 452
Query: 560 GTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+++A E+ + L V P + ++ ++ +EGR + DL+ K
Sbjct: 453 NKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVK 499
Score = 86.7 bits (213), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 212/511 (41%), Gaps = 52/511 (10%)
Query: 43 ASNQSHTSQFHINTCQKIFFSTSPNSSLELI--LACDWSD-ELENKLEELSPKLTHESVV 99
ASN + FH ++ + + + E I + ++D ++E L E S KL+ +
Sbjct: 39 ASNFTLYGSFHASSVETQVSANDASQDAERICKILTKFTDSKVETLLNEASVKLSPALIE 98
Query: 100 YVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDH 159
VL+KL N A + F W ++K F+ +++ Y+ ++ +L K W + MK
Sbjct: 99 EVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAKK 158
Query: 160 CYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI 219
+ +ET+ I +A+K + A+ FH
Sbjct: 159 -LLSKETFALISRRYARARKVKE--AIGAFH----------------------------- 186
Query: 220 GKKLED--MKIELSD-NFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
K+E+ K+E SD N +L L + R F + + ++ + +Y +L
Sbjct: 187 --KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKM--KKKRFEPDIKSYTILLEGW 242
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
+ ++ V EMK EG+E D+ Y I K + E+A++ F M KPS
Sbjct: 243 GQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSP 302
Query: 337 QDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
L+ + S + L F + +S G L Y+ + A R ++A K +
Sbjct: 303 HIFCSLINGLGSEKKLNDALEF--FERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTV 360
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M+ G P+ TY ++ L + R ++A V M C P + T+ I+++ C
Sbjct: 361 DEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNK 417
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+D A+ + +M K + LI + +++ A + EM++ V +RP
Sbjct: 418 ERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLD-VGIRPPGHM 476
Query: 517 FKTLIEKLLGARRLEEAMNLL----RLMKKQ 543
F L + LL R ++ +L+ RL K Q
Sbjct: 477 FSRLKQTLLDEGRKDKVTDLVVKMDRLRKTQ 507
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 126 bits (317), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 157/336 (46%), Gaps = 7/336 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + N I+YN ++ L R +++ V+ EM + GY +D TY + + + K A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ + M+ PSV + L+ S+ N + + F ++ G ++ Y +
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF--LDQMRVRGLCPNERTYTTLV 387
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
++ G +EA ++++ M + GF P +TY+ +I G C G+ EDA VL++M+E G
Sbjct: 388 DGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLS 447
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PD+ +++ ++ G C + +VD AL +M+EK D LI GF Q+R A L
Sbjct: 448 PDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EM+ +V L P + T+ LI LE+A+ L M ++ P + I+
Sbjct: 508 YEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566
Query: 561 ----TVEDASEFLKALSVKEYPSSAAYLQVFESFFN 592
T E LK + PS Y + E+ N
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 137/553 (24%), Positives = 216/553 (39%), Gaps = 72/553 (13%)
Query: 62 FSTSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCD 121
F++SP+ SL A + +L LS T E+ +L K ND F NW
Sbjct: 15 FASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANP 74
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
+ F +L+ +TL IL K K A
Sbjct: 75 HQFF------------------TLRCKCITLH----------------ILTKFKLYKTAQ 100
Query: 182 DLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLE---DMKIELSDNFVLTV 238
LA D AKTL D ++ + K L+ D+ S F L V
Sbjct: 101 ILAE--------------DVAAKTLDD-----EYASLVFKSLQETYDLCYSTSSVFDLVV 141
Query: 239 LKELRIYPV-KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFW-NVVEEMKKEG 296
R+ + KAL H G+ ++YN +L R + F NV +EM +
Sbjct: 142 KSYSRLSLIDKALSIVHLAQAH-GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQ 200
Query: 297 YEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL 356
++ TY + R F ++ A+ LF+ M P+V + L+ + D G
Sbjct: 201 VSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG- 259
Query: 357 VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIF 416
F++ G + Y+ + L + GR E ++ M G+ D +TY+ +I
Sbjct: 260 -FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIK 318
Query: 417 GLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDA 476
G CK G F A + EM +G P + T+T LI C A ++RA+ +M +
Sbjct: 319 GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 477 DADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ L++GF + +N AY++L EM + P T+ LI ++E+A+ +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDN-GFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 537 LRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLKALSVKE-------YPSSAAYLQVFES 589
L MK++ P + +S F D E AL VK P + Y + +
Sbjct: 438 LEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE---ALRVKREMVEKGIKPDTITYSSLIQG 494
Query: 590 FFNEGRHYEAKDL 602
F + R EA DL
Sbjct: 495 FCEQRRTKEACDL 507
Score = 66.6 bits (161), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/265 (22%), Positives = 112/265 (42%), Gaps = 23/265 (8%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G+ + +TYN ++ + D V+E+MK++G D+ +Y + F + +++
Sbjct: 409 NGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDE 468
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSLSKSVY 376
A+++ M++ KP S L++ + YE + G + Y
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTK-----EACDLYEEMLRVGLPPDEFTY 523
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ A G ++A ++ M G PD +TYS +I GL K R +A +L ++
Sbjct: 524 TALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFY 583
Query: 437 NGCIP---------------DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+P + K+ LI+G C + A F M+ KN+ D
Sbjct: 584 EESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAY 643
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIE 506
+++I+G + AY L EM++
Sbjct: 644 NIMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 63.9 bits (154), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 121/302 (40%), Gaps = 18/302 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + ++Y+ +L R V + V EM ++G + D TY + + F + R ++A
Sbjct: 445 GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L+E M+ P + L+ + DL ++ N+ G Y +
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCM--EGDLEKALQLHNEMVEKGVLPDVVTYSVLI 562
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYS---------------QVIFGLCKAGRFE 425
L K R EA++++ + P ++TY +I G C G
Sbjct: 563 NGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMT 622
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A V + M PD + I+I GHC A ++ +A + +M++ + + L+
Sbjct: 623 EADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALV 682
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+ +VN ++V ++ L + K L+E ++ +++L M K +
Sbjct: 683 KALHKEGKVNELNSVIVHVLRSCELSEAEQA-KVLVEINHREGNMDVVLDVLAEMAKDGF 741
Query: 546 PP 547
P
Sbjct: 742 LP 743
>sp|Q9LZP3|PP293_ARATH Pentatricopeptide repeat-containing protein At3g62470,
mitochondrial OS=Arabidopsis thaliana GN=At3g62470 PE=2
SV=1
Length = 599
Score = 126 bits (316), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 163/327 (49%), Gaps = 9/327 (2%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H++ TYN ++ +LA+
Sbjct: 152 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF 211
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 212 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 270
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 271 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 326 DQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 444
Query: 521 IEKLLGARRLEEAMNLLRLMKKQNYPP 547
I+ + + E A + M + P
Sbjct: 445 IKLMANQKMPEHATRIYNKMIQNEIEP 471
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 183/452 (40%), Gaps = 46/452 (10%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 125 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F S Y+ M+ L + L M + ET+ +
Sbjct: 182 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 240
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 241 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 295
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
++ T+ NG RV E+ R WN +M +
Sbjct: 296 PNMMT------------------------YTVLLNGWCRVRNLIEAAR-IWN---DMIDQ 327
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + DI + + + R DA+KLF M P+V+ ++++R ++ +
Sbjct: 328 GLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETA 387
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ + + G +VY + + D +++K M+ G PD TY+ +I
Sbjct: 388 IEY--FDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI 445
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
+ E A + ++M +N P I T+ ++++ + A + + +M++K
Sbjct: 446 KLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGIC 505
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
D + VLI G + + + A + L EM++K
Sbjct: 506 PDDNSYTVLIRGLIGEGKSREACRYLEEMLDK 537
>sp|Q9LEQ7|PP382_ARATH Pentatricopeptide repeat-containing protein At5g14820,
mitochondrial OS=Arabidopsis thaliana GN=At5g14820 PE=2
SV=1
Length = 598
Score = 124 bits (311), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 161/312 (51%), Gaps = 10/312 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H++ TYN ++ +LA+
Sbjct: 151 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQF 210
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 211 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 269
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 270 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 324
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 325 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 384
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 385 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 443
Query: 521 IEKLLGARRLEE 532
I KL+ +++ E
Sbjct: 444 I-KLMANQKMPE 454
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 183/464 (39%), Gaps = 70/464 (15%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 124 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 180
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F S Y+ M+ L + L M + ET+ +
Sbjct: 181 FCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 239
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 240 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 294
Query: 236 LTVLKELRIYPVKALGFFR----------W--VGEHSGYKHNTITYNGILRVLARHESVR 283
++ Y V G+ R W + +H G K + + +N +L L R
Sbjct: 295 PNMM----TYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKS 349
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
D + MK +G ++ +Y + R F K ME A++ F+ M+D +P
Sbjct: 350 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA------- 402
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+VY + + D +++K M+ G
Sbjct: 403 ------------------------------AVYTCLITGFGTQKKLDTVYELLKEMQEKG 432
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TY+ +I + E + ++M +N P I T+ ++++ + A +
Sbjct: 433 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 492
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +M++K D + VLI G +S+ + A + L EM++K
Sbjct: 493 AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 536
>sp|Q3EAF8|PP294_ARATH Pentatricopeptide repeat-containing protein At3g62540,
mitochondrial OS=Arabidopsis thaliana GN=At3g62540 PE=2
SV=1
Length = 599
Score = 123 bits (309), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 160/312 (51%), Gaps = 10/312 (3%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
L++MK++LS + ++ VL+ R A FF W E G+ H + TYN ++ +LA+
Sbjct: 152 LDEMKLDLSHDLIVEVLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQF 211
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
+V+EEM +G + ++T+ + F + + AV +FE M +K V+ + L
Sbjct: 212 ETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCL 270
Query: 343 LRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMKAMK 400
L S+ LG +V ++ L + ++ Y + ++ EA ++ M
Sbjct: 271 L---DSLGRAKLGKEAQVL--FDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMI 325
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+ G +PD + ++ ++ GL ++ + DA + M+ G P+++++TI+I+ C + ++
Sbjct: 326 DHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSME 385
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTL 520
A+ F M++ DA + LI GF +QK+++ Y+LL EM EK P T+ L
Sbjct: 386 TAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNAL 444
Query: 521 IEKLLGARRLEE 532
I KL+ +++ E
Sbjct: 445 I-KLMANQKMPE 455
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 184/464 (39%), Gaps = 70/464 (15%)
Query: 63 STSPNSSLELILACDWSDEL-------ENKLEELSPKLTHESVVYVLRKLDNDPEKASAF 115
ST+P E+ C DEL E L+E+ L+H+ +V VL + + + A F
Sbjct: 125 STNPE---EVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVEVLERFRHARKPAFRF 181
Query: 116 FNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLK 175
F W +++ F +S Y+ M+ L + L M + ET+ +
Sbjct: 182 FCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKG-LLTMETFTIAMKAFA 240
Query: 176 KAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
AK+ + + +I ++ + + +L S K+GK+ + + +L + F
Sbjct: 241 AAKERKKAVGIFELMKKYKFKIGVETI-----NCLLDSLGRAKLGKEAQVLFDKLKERFT 295
Query: 236 LTVLKELRIYPVKALGFFR----------W--VGEHSGYKHNTITYNGILRVLARHESVR 283
++ Y V G+ R W + +H G K + + +N +L L R
Sbjct: 296 PNMM----TYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKS 350
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
D + MK +G ++ +Y + R F K ME A++ F+ M+D +P
Sbjct: 351 DAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDA------- 403
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+VY + + D +++K M+ G
Sbjct: 404 ------------------------------AVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
PD TY+ +I + E + ++M +N P I T+ ++++ + A +
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 493
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
+ +M++K D + VLI G +S+ + A + L EM++K
Sbjct: 494 AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDK 537
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 122 bits (306), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/511 (22%), Positives = 226/511 (44%), Gaps = 39/511 (7%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
+ +W+ D+ +P + Y+ ML LV+ +SLK ++ +M + T+ ++
Sbjct: 139 SVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKA 198
Query: 174 LKKAKK----------------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVV-LGSDWD 216
L +A + D G ++E +D + +V G W
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWS 258
Query: 217 DKIGKKLEDMKIELSDNFVL-TVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
+ +S N ++ KE R+ AL F + + G+ + T+N ++
Sbjct: 259 N------------VSVNVIVHGFCKEGRVE--DALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + V+ +++ M +EGY+ D+ TY + K +++AV++ + M+ P+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ L+ ++ N + +A S G ++ + + L A ++
Sbjct: 365 TVTYNTLISTLCKENQVEEAT--ELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M++ G EPD TY+ +I LC G+ ++A N+L +ME +GC + T+ LI G C
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCK 482
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
AN+ A F +M ++ + LI+G +RV A +L+ +MI + + +P +
Sbjct: 483 ANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDKY 541
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
T+ +L+ +++A ++++ M P + IS K G VE AS+ L+++
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 573 SVKEYP-SSAAYLQVFESFFNEGRHYEAKDL 602
+K + AY V + F + + EA +L
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINL 632
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 163/371 (43%), Gaps = 42/371 (11%)
Query: 238 VLKELRIYP--VKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
+L LR P AL F + + Y IL L R S D ++E+MK
Sbjct: 53 LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSS 112
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
EM T++ + + +F + ++ + + ++M+D L+ PD
Sbjct: 113 RCEMGTSTFLILIESYAQFELQDEILSVVDWMID----------EFGLK-------PDTH 155
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
R+ N GNSL KL A+ M G +PD T++ +I
Sbjct: 156 FYNRMLNLLVD-GNSL-------------KLVEISHAK-----MSVWGIKPDVSTFNVLI 196
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
LC+A + A +L++M G +PD KT+T ++QG+ ++D AL +M+E
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCS 256
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
++V+++GF + RV A + EM + P Q TF TL+ L A ++ A+
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316
Query: 536 LLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFF 591
++ +M ++ Y P + IS K G V++A E L + ++ P++ Y + +
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 592 NEGRHYEAKDL 602
E + EA +L
Sbjct: 377 KENQVEEATEL 387
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 133/319 (41%), Gaps = 35/319 (10%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
NT+TYN ++ L + V + + + +G D+ T+ + + R A++LF
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-----------------------VFRVA 361
E M +P ++L+ S+ S D L F A
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483
Query: 362 NK----------YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITY 411
NK E G S + Y+ + L K R ++A ++M M G +PD TY
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMME 471
+ ++ C+ G + A +++ M NGC PDI T+ LI G C A V+ A +
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603
Query: 472 KNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL-GARRL 530
K + + +I G +++ A L EM+E+ P +++ + L G +
Sbjct: 604 KGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPI 663
Query: 531 EEAMN-LLRLMKKQNYPPF 548
EA++ L+ L++K P F
Sbjct: 664 REAVDFLVELLEKGFVPEF 682
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
A K F P+ Y +++ L ++G F+D +L++M+ + C T+ ILI+ + A
Sbjct: 73 ASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESY-AQF 131
Query: 458 EVDRALLCFAKMMEKNYDADAD------LLDVLINGFLSQKRVNGAY-KLLVEMIEKVRL 510
E+ +L M + D +L++L++G S K V ++ K+ V I
Sbjct: 132 ELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGN-SLKLVEISHAKMSVWGI----- 185
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASEFLK 570
+P +TF LI+ L A +L A+ +L M P + F + G +E+ +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQ--GYIEEG-DLDG 242
Query: 571 ALSVKEYP-------SSAAYLQVFESFFNEGRHYEAKDLL 603
AL ++E S+ + + F EGR +A + +
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 122 bits (305), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 159/349 (45%), Gaps = 37/349 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G K N TY ++ L ++ +M ++G ++ TY + + K M+
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSIN-NPDLGLVFRVANKYESLGNSLSKSVY 376
EDAV + E M P+ + + L++ N + +G++ ++ + S+
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
DG R+ G FD A +++ M + G PD TY+ +I LCK+ R E+AC++ D +E+
Sbjct: 470 DGQCRS----GNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G P++ +T LI G+C A +VD A L KM+ KN ++ + LI+G + ++
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL E + K+ L+P +T LI +LL + A
Sbjct: 586 A-TLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY---------------------- 622
Query: 557 SKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
S F + LS P + Y +++ EGR +A+D++ K
Sbjct: 623 ---------SRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAK 662
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 123/548 (22%), Positives = 245/548 (44%), Gaps = 38/548 (6%)
Query: 66 PNSSLELILACDW--SDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKK 123
P+ L ++ +W S L++ + +SP +H S ++ LD DP+ A F +W+
Sbjct: 63 PHRLLSILSKPNWHKSPSLKSMVSAISP--SHVSSLF---SLDLDPKTALNFSHWISQNP 117
Query: 124 QFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD- 182
+++ S Y+ +L L+N + + M + + + Y +L + +K K
Sbjct: 118 RYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDALY--VLDLCRKMNKDERF 175
Query: 183 -------LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFV 235
+ N + + + +D + + ++++ +DK+ + ++
Sbjct: 176 ELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEML-----EDKVCPNIYTYNKMVNGYCK 230
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L ++E Y K + +G + TY ++ + + + + V EM +
Sbjct: 231 LGNVEEANQYVSKIV--------EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
G + Y + R +++A+ LF M D P+V+ ++L++S+
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
L + + E G + Y + +L +F++A +++ M G P+ ITY+ +I
Sbjct: 343 L--NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
G CK G EDA +V++ ME P+ +T+ LI+G+C +N V +A+ KM+E+
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVL 459
Query: 476 ADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMN 535
D + LI+G + AY+LL M ++ L P Q T+ ++I+ L ++R+EEA +
Sbjct: 460 PDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR-GLVPDQWTYTSMIDSLCKSKRVEEACD 518
Query: 536 LLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFF 591
L ++++ P + I K G V++A L K LS P+S + +
Sbjct: 519 LFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578
Query: 592 NEGRHYEA 599
+G+ EA
Sbjct: 579 ADGKLKEA 586
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 108/262 (41%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ R + + ++ M G D TY + K + +E+A LF
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVYDGIHRAL 383
+ + P+V + L+ D L+ L NSL+ ++ + L
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLT---FNALIHGL 577
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G+ EA + + M G +P T + +I L K G F+ A + +M +G PD
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T IQ +C + A AKM E D LI G+ + N A+ +L
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKR 697
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M P Q TF +LI+ LL
Sbjct: 698 M-RDTGCEPSQHTFLSLIKHLL 718
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 123/281 (43%), Gaps = 20/281 (7%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG K + TY ++ R + D +++ +M++ G D+ TY + + +
Sbjct: 631 SGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNF 690
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSI-------NNPDLGLVFRVANKYESLGNSLS 372
A + + M D +PS L++ + + + P+L + + +++++ L
Sbjct: 691 AFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM-EFDTVVELLE 749
Query: 373 KSV----------YDGIHRALTKLGRFDEAEKMMKAM-KNAGFEPDNITYSQVIFGLCKA 421
K V Y+ + + ++G AEK+ M +N G P + ++ ++ CK
Sbjct: 750 KMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKL 809
Query: 422 GRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLL 481
+ +A V+D+M G +P +++ +LI G E +R F +++ Y D
Sbjct: 810 KKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAW 869
Query: 482 DVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIE 522
++I+G Q V Y+L ++EK + T+ LIE
Sbjct: 870 KIIIDGVGKQGLVEAFYELF-NVMEKNGCKFSSQTYSLLIE 909
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 2/225 (0%)
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L + + V + ++ + ++++G ++ Y + + K +++A + E M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLG 387
+ P+ + L+ + + + L + K +G + S + L K G
Sbjct: 559 LSKNCLPNSLTFNALIHGLCA--DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
FD A + M ++G +PD TY+ I C+ GR DA +++ +M ENG PD+ T++
Sbjct: 617 DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYS 676
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
LI+G+ + + A +M + + LI L K
Sbjct: 677 SLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Score = 39.3 bits (90), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 50/251 (19%), Positives = 95/251 (37%), Gaps = 64/251 (25%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR---- 315
+G + TY+ +++ ++V++ M+ G E T++ + + + +
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 316 ------------MME--DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVA 361
MME V+L E M++ P+ + L+ I + N RVA
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGN------LRVA 779
Query: 362 NKY-----ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP---------- 406
K + G S S+ V++ + KL + +EA K++ M G P
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 407 -------------------------DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
D + + +I G+ K G E + + ME+NGC
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 442 DIKTWTILIQG 452
+T+++LI+G
Sbjct: 900 SSQTYSLLIEG 910
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 132/285 (46%), Gaps = 38/285 (13%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L + S+ + +N+ EM+ +G++ DI TY + F
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D KL M+ P+V S+L+ S
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDS-------------------------------- 342
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
K G+ EA++++K M G P+ ITY+ +I G CK R E+A ++D M
Sbjct: 343 -----FVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC PDI T+ ILI G+C AN +D L F +M + A+ + L+ GF ++ A
Sbjct: 398 GCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVA 457
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
KL EM+ + R+RP ++K L++ L LE+A+ + ++K
Sbjct: 458 KKLFQEMVSR-RVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Score = 87.8 bits (216), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 131/300 (43%), Gaps = 15/300 (5%)
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
I +N + +A+ + + ++M+ +G I T + F + R + A
Sbjct: 88 VIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMG 147
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE------SLGNSLSKSVYDGI 379
+M Y+P + LL L L RV+ E +G+ + + +
Sbjct: 148 KIMKLGYEPDTVIFNTLLNG--------LCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
L G+ +A ++ M GF+P+ +TY V+ +CK+G+ A +L +MEE
Sbjct: 200 VNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNI 259
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D ++I+I G C +D A F +M K + AD + LI GF + R + K
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF 559
LL +MI++ ++ P TF LI+ + +L EA LL+ M ++ P + I F
Sbjct: 320 LLRDMIKR-KISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGF 378
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 131/322 (40%), Gaps = 44/322 (13%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL--------------------- 356
+DAV LF M+ P+V D + L +I+ +L L
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 357 ------------VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF 404
F K LG +++ + L R EA +++ M G
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGH 189
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
+P IT + ++ GLC G+ DA ++D M E G P+ T+ ++ C + + A+
Sbjct: 190 KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAME 249
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA---TFKTLI 521
KM E+N DA ++I+G ++ A+ L EM ++ ++A T+ TLI
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEM----EIKGFKADIITYNTLI 305
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY- 577
A R ++ LLR M K+ P F I F G + +A + LK + +
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 578 PSSAAYLQVFESFFNEGRHYEA 599
P++ Y + + F E R EA
Sbjct: 366 PNTITYNSLIDGFCKENRLEEA 387
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 9/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G + + +TYN I+ + R +++ +M++ + D+ TY I + ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYD 377
A+ LF+ M K SV + L+R + D L+ + E + N ++ ++
Sbjct: 246 AAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVIT---FN 302
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EA ++ K M G P+ ITY+ ++ G C R +A N+LD M N
Sbjct: 303 VLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
C PDI T+T LI+G+C VD + F + ++ A+A +L+ GF ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ L P T+ L++ L +LE+A+ + ++K ++
Sbjct: 423 EELFQEMVSHGVL-PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIE 481
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA +L K P+ Y + +G EA LL K
Sbjct: 482 GMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 156/349 (44%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G HN T N ++ R ++V+ ++ K GYE D T+ + + +
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+AV L + M++ +P V + ++ I + D L + K E Y
Sbjct: 175 SEAVVLVDRMVENGCQPDVVTYNSIVNGIC--RSGDTSLALDLLRKMEERNVKADVFTYS 232
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I +L + G D A + K M+ G + +TY+ ++ GLCKAG++ D +L +M
Sbjct: 233 TIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR 292
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
+P++ T+ +L+ ++ A + +M+ + + + L++G+ Q R++ A
Sbjct: 293 EIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEA 352
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L M+ + P TF +LI+ +R+++ M + R + K+ + VQ
Sbjct: 353 NNMLDLMVRN-KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQ 411
Query: 555 YISKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G ++ A E F + +S P Y + + + G+ +A ++
Sbjct: 412 GFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 132/292 (45%), Gaps = 11/292 (3%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY- 376
+DA+ LF+ M+ PS+ D S +I+ LV + E N ++ ++Y
Sbjct: 70 DDAIALFQEMIRSRPLPSLVDFSRFFSAIA--RTKQFNLVLDFCKQLEL--NGIAHNIYT 125
Query: 377 -DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ + + + A ++ + G+EPD T++ +I GL G+ +A ++D M
Sbjct: 126 LNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMV 185
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
ENGC PD+ T+ ++ G C + + AL KM E+N AD +I+ ++
Sbjct: 186 ENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCID 245
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L EM E ++ T+ +L+ L A + + LL+ M + P F
Sbjct: 246 AAISLFKEM-ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
Query: 556 ISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ F G +++A+E K + + P+ Y + + + + R EA ++L
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/454 (20%), Positives = 181/454 (39%), Gaps = 61/454 (13%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL-GVLKKAKKA 180
K + P +T ++ +++ L + + + V + RM E+ C + TY SI+ G+ + +
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 181 SDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
L L + + VK T++D + D ++M+ + + V+T
Sbjct: 211 LALDLLRKMEERNVKADVF--TYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVT--- 265
Query: 241 ELRIYPVKALGFFRWVGEHSG-----------YKHNTITYNGILRVLARHESVRDFWNVV 289
Y G + + G N IT+N +L V + +++ +
Sbjct: 266 ----YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSI 349
+EM G +I TY + + + +A + + M+ P + + L++ +
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 350 NNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDN 408
D G+ VFR +K + N+++ S+ + + + G+ AE++ + M + G PD
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSI---LVQGFCQSGKIKLAEELFQEMVSHGVLPDV 438
Query: 409 ITY-----------------------------------SQVIFGLCKAGRFEDACNVLDE 433
+TY + +I G+CK G+ EDA N+
Sbjct: 439 MTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCS 498
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKR 493
+ G P++ T+T++I G C + A + KM E + + LI L
Sbjct: 499 LPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGD 558
Query: 494 VNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+ + KL+ EM + ++ K +I+ LL
Sbjct: 559 LTASAKLIEEM-KSCGFSADASSIKMVIDMLLSG 591
>sp|Q9S7Q2|PP124_ARATH Pentatricopeptide repeat-containing protein At1g74850,
chloroplastic OS=Arabidopsis thaliana GN=PTAC2 PE=2 SV=1
Length = 862
Score = 117 bits (293), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 186/421 (44%), Gaps = 15/421 (3%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKEL--RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
I + L+ K +LS N V KE R ++L F+++ K N Y ++ +L
Sbjct: 92 IARCLDIFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLL 151
Query: 277 ARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSV 336
R + V +EM +G + +Y + + + E +++L + M + PS+
Sbjct: 152 GREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSI 211
Query: 337 QDCSLLLRSISSINNPDLGLVFRVAN-KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKM 395
+ ++ + + GL+ A ++E + + Y+ + A G DEAE +
Sbjct: 212 LTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIV--TYNTLLSACAIRGLGDEAEMV 269
Query: 396 MKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCA 455
+ M + G PD TYS ++ K R E C++L EM G +PDI ++ +L++ +
Sbjct: 270 FRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAK 329
Query: 456 ANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQA 515
+ + A+ F +M +A+ VL+N F R + +L +EM + P A
Sbjct: 330 SGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAA 388
Query: 516 TFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLKAL 572
T+ LIE +E + L M ++N P E + I K G EDA + L+ +
Sbjct: 389 TYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM 448
Query: 573 SVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYKCPHHIRQDSKI----SLLFGSAKSNK 627
+ + PSS AY V E+ F + YE + + H + + I SLL+ A+
Sbjct: 449 TANDIVPSSKAYTGVIEA-FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGL 507
Query: 628 V 628
V
Sbjct: 508 V 508
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 124/331 (37%), Gaps = 35/331 (10%)
Query: 250 LGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISR 309
LG F + H G + + +TYN +L A + V M G D+ TY +
Sbjct: 232 LGLFAEM-RHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVE 290
Query: 310 QFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINN--PDLGLVFRV------- 360
F K R +E L M G P + ++LL + + + +G+ ++
Sbjct: 291 TFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTP 350
Query: 361 -ANKYESLGNSLSKSV-YDGIHRALTKL----------------------GRFDEAEKMM 396
AN Y L N +S YD + + ++ G F E +
Sbjct: 351 NANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLF 410
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
M EPD TY +IF K G EDA +L M N +P K +T +I+ A
Sbjct: 411 HDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQA 470
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ AL+ F M E + + L+ F V + +L +++ R + T
Sbjct: 471 ALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN-RDT 529
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
F IE + EEA+ M+K P
Sbjct: 530 FNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 117 bits (292), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 200/453 (44%), Gaps = 40/453 (8%)
Query: 114 AFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
++FN + D F P S ++ +L +V S Q+W E+ + + Y G+
Sbjct: 115 SYFNEMVDNG-FVPGSNCFNYLLTFVVGSSSFNQWW---SFFNENKSKVVLDVY--SFGI 168
Query: 174 LKKA-------KKASD-LAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLED 225
L K +K+ D L L +F G + + TL+D G +I +K +D
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEF--GFSPNVV---IYTTLID---GCCKKGEI-EKAKD 219
Query: 226 MKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKH-----------NTITYNGILR 274
+ E+ L ++ R Y V G F+ + G++ N TYN ++
Sbjct: 220 LFFEMGK---LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMN 276
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L + +D + V +EM++ G +I TY + + + +A K+ + M P
Sbjct: 277 QLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINP 336
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
++ + L+ + LG + +S G S S Y+ + + G A K
Sbjct: 337 NLITYNTLIDGFCGVG--KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M+K M+ G +P +TY+ +I ++ E A + MEE G +PD+ T+++LI G C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
+++ A F M+EKN + + + + +I G+ + A KLL EM EK L P
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEK-ELAPNV 513
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A+++ +IE L R+ +EA L+ M P
Sbjct: 514 ASYRYMIEVLCKERKSKEAERLVEKMIDSGIDP 546
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 113/233 (48%), Gaps = 5/233 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y+ + L K GR +A ++ M+ G + +TY+ +I GLC+ + +A V+D+M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ +G P++ T+ LI G C ++ +AL + + ++L++GF +
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDT 389
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+GA K++ EM E+ ++P + T+ LI+ + +E+A+ L M++ P +
Sbjct: 390 SGAAKMVKEMEER-GIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSV 448
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
I F G + +AS K++ K P+ Y + + EG Y A LL
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 101/220 (45%), Gaps = 5/220 (2%)
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+Y + K G ++A+ + M G + TY+ +I GL K G + + ++M
Sbjct: 200 IYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKM 259
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+E+G P++ T+ ++ C A F +M E+ + + LI G + ++
Sbjct: 260 QEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKL 319
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
N A K +V+ ++ + P T+ TLI+ G +L +A++L R +K + P +
Sbjct: 320 NEANK-VVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNI 378
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESF 590
+S F G A++ +K + + PS Y + ++F
Sbjct: 379 LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/354 (20%), Positives = 142/354 (40%), Gaps = 34/354 (9%)
Query: 131 VYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFH 190
Y++++ L KQ + +M+ED + TY ++ L K + D A F
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD--AFQVFD 292
Query: 191 DGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKAL 250
+ + ++ + V ++ IG +MK+ N V+ +K I P
Sbjct: 293 EMRERGVSCNIVT-----------YNTLIGGLCREMKLN-EANKVVDQMKSDGINP---- 336
Query: 251 GFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
N ITYN ++ + ++ ++K G + TY +
Sbjct: 337 --------------NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG 382
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F + A K+ + M + KPS ++L+ + + +N + + R++ E LG
Sbjct: 383 FCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLS--MEELGLV 440
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
Y + G+ +EA ++ K+M EP+ + Y+ +I G CK G A +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
L EMEE P++ ++ +I+ C + A KM++ D +L ++
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 162/352 (46%), Gaps = 10/352 (2%)
Query: 259 HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMME 318
+G++ N +TY +L+V+ + ++ +M++ ++D Y I K ++
Sbjct: 205 ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLD 264
Query: 319 DAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYD 377
+A LF M +K + + L+R D G + R K + + ++ +
Sbjct: 265 NAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVA---FS 321
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ K G+ EAE++ K M G PD +TY+ +I G CK + + A ++LD M
Sbjct: 322 ALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSK 381
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++ A
Sbjct: 382 GCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVA 441
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + R+RP ++K L++ L E+A+ + ++K +
Sbjct: 442 KELFQEMVSR-RVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA DLL++
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA-DLLFR 551
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 163/349 (46%), Gaps = 7/349 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G HN T + ++ R + ++ + ++ K GYE D T+ + +
Sbjct: 99 ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRV 158
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+A++L + M++ +KP++ + L+ + +N V + E+ G ++ Y
Sbjct: 159 SEALELVDRMVEMGHKPTLITLNALVNGL-CLNGKVSDAVLLIDRMVET-GFQPNEVTYG 216
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + K G+ A ++++ M+ + D + YS +I GLCK G ++A N+ +EME
Sbjct: 217 PVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIK 276
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G DI +T LI+G C A D M+++ D LI+ F+ + ++ A
Sbjct: 277 GFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREA 336
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQ 554
+L EMI++ + P T+ +LI+ +L++A ++L LM + P F +
Sbjct: 337 EELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILIN 395
Query: 555 YISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNEGRHYEAKDL 602
K ++D E + +S++ + + Y + + F G+ AK+L
Sbjct: 396 GYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKEL 444
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 34/323 (10%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L + S+ + +N+ EM+ +G++ DI Y + R F
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 318 EDAVKLFEFMMDGPYKPSVQ------DC---------------SLLLRSIS--SINNPDL 354
+D KL M+ P V DC ++ R IS ++ L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Query: 355 GLVFRVANKYESLGNSLSKSVYDG----------IHRALTKLGRFDEAEKMMKAMKNAGF 404
F N+ + + L V G + K D+ ++ + M G
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418
Query: 405 EPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALL 464
D +TY+ +I G C+ G+ E A + EM PDI ++ IL+ G C E ++AL
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478
Query: 465 CFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKL 524
F K+ + + D + +++I+G + +V+ A+ L + K ++P T+ +I L
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLK-GVKPDVKTYNIMIGGL 537
Query: 525 LGARRLEEAMNLLRLMKKQNYPP 547
L EA L R M++ + P
Sbjct: 538 CKKGSLSEADLLFRKMEEDGHSP 560
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 127/292 (43%), Gaps = 13/292 (4%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+DAV LF+ M +P + D S L ++ D LV + + E G + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYD--LVLDLCKQMELKGIAHNLYTLS 111
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + A M + G+EPD +T+S +I GLC GR +A ++D M E
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P + T L+ G C +V A+L +M+E + + +V L +G
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN----EVTYGPVLKVMCKSGQ 227
Query: 498 YKLLVEMIEKVRLRPWQ---ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
L +E++ K+ R + + +I+ L L+ A NL M+ + + +
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 555 YISKF---GTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
I F G +D ++ L+ + K P A+ + + F EG+ EA++L
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/451 (20%), Positives = 175/451 (38%), Gaps = 76/451 (16%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
F+P+ Y +L+ + LR+M+E ++ Y I+ L K S
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL--CKDGSLDN 265
Query: 185 ALNQFHDGMVKEIAMDNVAKTLV--DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKEL 242
A N F++ +K D + T + WDD K L DM +
Sbjct: 266 AFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG-AKLLRDMI-------------KR 311
Query: 243 RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDID 302
+I P + + ++ ++ + +R+ + +EM + G D
Sbjct: 312 KITP------------------DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVA 361
TY + F K ++ A + + M+ P+++ ++L+ N D GL +FR
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR-- 411
Query: 362 NKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKA 421
K G Y+ + + +LG+ + A+++ + M + PD ++Y ++ GLC
Sbjct: 412 -KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470
Query: 422 GRFEDACNVLDEMEEN-----------------------------------GCIPDIKTW 446
G E A + +++E++ G PD+KT+
Sbjct: 471 GEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTY 530
Query: 447 TILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE 506
I+I G C + A L F KM E + + ++LI L + + K L+E I+
Sbjct: 531 NIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAK-LIEEIK 589
Query: 507 KVRLRPWQATFKTLIEKLLGARRLEEAMNLL 537
+ +T K +++ L R + +++L
Sbjct: 590 RCGFSVDASTVKMVVDMLSDGRLKKSFLDML 620
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E K + + Y+ I+ L +H S+ + +N+ EM+ +G +I TY + F
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+D KL M+ P+V S+L+ S
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDS-------------------------------- 342
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
K G+ EAE++ K M + G PD ITY+ +I G CK + A ++D M
Sbjct: 343 -----FVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSK 397
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
GC P+I+T+ ILI G+C AN +D L F KM + AD + LI GF ++N A
Sbjct: 398 GCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVA 457
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP---PFPEPFVQ 554
+L EM+ + ++ P T+K L++ L E+A+ + ++K +
Sbjct: 458 KELFQEMVSR-KVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIH 516
Query: 555 YISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ V+DA + +L +K P Y + +G EA+ L K
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 126/284 (44%), Gaps = 12/284 (4%)
Query: 354 LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
L L F K LG + + + L GR EA +++ M G +PD IT +
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
++ GLC +G+ +A ++D+M E GC P+ T+ ++ C + + A+ KM E+N
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERN 258
Query: 474 YDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEA 533
DA ++I+G ++ A+ L EM E + T+ LI A R ++
Sbjct: 259 IKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDG 317
Query: 534 MNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFES 589
LLR M K+ P F I F G + +A E K + + P + Y + +
Sbjct: 318 AKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDG 377
Query: 590 FFNEGRHYEAK---DLLYK--CPHHIRQDSKISLLFGSAKSNKV 628
F E +A DL+ C +IR + L+ G K+N++
Sbjct: 378 FCKENHLDKANQMVDLMVSKGCDPNIRTFN--ILINGYCKANRI 419
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/309 (20%), Positives = 128/309 (41%), Gaps = 40/309 (12%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + +R+ + +EM G D TY + F K ++ A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ P+++ ++L+ N D GL +FR K G Y+ + +
Sbjct: 392 DLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR---KMSLRGVVADTVTYNTLIQGF 448
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITY-------------------------------- 411
+LG+ + A+++ + M + P+ +TY
Sbjct: 449 CELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDI 508
Query: 412 ---SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAK 468
+ +I G+C A + +DA ++ + G P +KT+ I+I G C + A L F K
Sbjct: 509 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRK 568
Query: 469 MMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGAR 528
M E + D ++LI L + K L+E +++ +T K +I+ L R
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVK-LIEELKRCGFSVDASTIKMVIDMLSDGR 627
Query: 529 RLEEAMNLL 537
+ +++L
Sbjct: 628 LKKSFLDML 636
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 101/226 (44%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ K ++D + K M+ G + T S +I C+ + A + + ++ + G P
Sbjct: 97 AIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEP 156
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
+ T++ LI G C V AL +M+E + D ++ L+NG + A L+
Sbjct: 157 NTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLI 216
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISK 558
+M+E +P T+ ++ + + + AM LLR M+++N + + + K
Sbjct: 217 DKMVE-YGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK 275
Query: 559 FGTVEDASEFLKALSVKEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
G++++A + +K ++ Y + F N GR + LL
Sbjct: 276 HGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLL 321
Score = 53.1 bits (126), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 85/186 (45%), Gaps = 4/186 (2%)
Query: 390 DEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTIL 449
D+A + + M ++ P I +S++ + K +++ + +ME G ++ T +I+
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 450 IQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
I C ++ A K+++ Y+ + LING + RV+ A +L+ M+E +
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE-MG 188
Query: 510 LRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP---EPFVQYISKFGTVEDAS 566
+P T TL+ L + + EAM L+ M + P P + + K G A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAM 248
Query: 567 EFLKAL 572
E L+ +
Sbjct: 249 ELLRKM 254
>sp|Q9LUJ4|PP248_ARATH Pentatricopeptide repeat-containing protein At3g22670,
mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2
SV=1
Length = 562
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 152/331 (45%), Gaps = 9/331 (2%)
Query: 217 DKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVL 276
+ + K+L + ++++ VL VL+ +A GFF W +GY H+ TYN ++ VL
Sbjct: 117 EDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVL 176
Query: 277 ARHESVRDFWNVVEEMKK--EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+ + W +V EM K E + +DT K+ R+ K AV F M+ Y
Sbjct: 177 GKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF-LEMEKSY-- 233
Query: 335 SVQDCSLLLRSI--SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V+ ++ + S+ + + + V K +++ IH K +FD+A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIH-GFCKARKFDDA 292
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
MM MK F PD +TY+ + CK G F +L+EM ENGC P++ T+TI++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 453 HCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRP 512
+ +V AL + KM E DA LI+ R A ++ +M + +R
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQ-GVRR 411
Query: 513 WQATFKTLIEKLLGARRLEEAMNLLRLMKKQ 543
+ T+I L R E A+ LL+ M+ +
Sbjct: 412 DVLVYNTMISAALHHSRDEMALRLLKRMEDE 442
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 168/426 (39%), Gaps = 52/426 (12%)
Query: 75 ACDWSDELENKLEELSPKL-------THESVVYVLRKLDNDPEKASAFFNWVCDKKQFRP 127
CD+ ++ + E++ +L T V+ VLR+ N +A FF W + +
Sbjct: 105 VCDFLNKKDTSHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVH 164
Query: 128 SSTVYSLMLRNLVNKDSLKQFWVTLRRMK--EDHCYIEEETYLSILGVLKKAKK------ 179
S Y+ M+ L + W + M E+ + +T ++ L K+ K
Sbjct: 165 SGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVD 224
Query: 180 -----------ASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI--------- 219
+D A+N D +VKE ++++ + + + D +
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFC 284
Query: 220 -GKKLEDMKIELSDNFVLTVLKELRIYP--VKAL---GFFRWVGE------HSGYKHNTI 267
+K +D + + V ++ Y V+A G FR V E +G N +
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 268 TYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFM 327
TY ++ L + + V + V E+MK++G D Y + K +DA ++FE M
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 328 MDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL-GNSLSKSV--YDGIHRALT 384
+ + V + ++ + + ++ L R+ + E G S S +V Y + +
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMAL--RLLKRMEDEEGESCSPNVETYAPLLKMCC 462
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
+ ++ M D TY +I GLC +G+ E+AC +E G +P
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 445 TWTILI 450
T +L+
Sbjct: 523 TCKMLV 528
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 86/182 (47%), Gaps = 10/182 (5%)
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN--GCIPDIKTWTILIQGHCA 455
A G+ TY+ ++ L K F+ +++EM +N + + T + +++
Sbjct: 156 ANSQTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAK 215
Query: 456 ANEVDRALLCFAKMMEKNYDADADL--LDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
+ + ++A+ F +M EK+Y D ++ L++ + + + A+++ +++ + ++ P
Sbjct: 216 SGKYNKAVDAFLEM-EKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK--PD 272
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLK 570
TF LI AR+ ++A ++ LMK + P FV+ K G +E L+
Sbjct: 273 ARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLE 332
Query: 571 AL 572
+
Sbjct: 333 EM 334
>sp|Q9LMY5|PPR41_ARATH Putative pentatricopeptide repeat-containing protein At1g13630
OS=Arabidopsis thaliana GN=At1g13630 PE=2 SV=3
Length = 826
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 207/488 (42%), Gaps = 53/488 (10%)
Query: 152 LRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKT--LVDV 209
L++MK+ + + ++Y S+L ++ K D+ + + +D + + L D
Sbjct: 189 LKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDA 248
Query: 210 VL---GSDWDDKIGKKLEDMK-----------IELSDNFVLTVLKELRIYPVKALGFFRW 255
VL S+W D IG + ++++ +F TVLK + P
Sbjct: 249 VLFLRTSEWKD-IGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLK-CGLVP--------- 297
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
S Y HN I NG+ V S+ + + +M K G E D TY +++ F
Sbjct: 298 ----SVYSHN-ILINGLCLV----GSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLG 348
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVF---RVANKYESLGNSLS 372
M+ A ++ M+D P V ++LL + N D+GLV ++ +E L + +
Sbjct: 349 MISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE-LNSIIP 407
Query: 373 KSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLD 432
SV + L K GR DEA + MK G PD + YS VI GLCK G+F+ A + D
Sbjct: 408 CSV---MLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYD 464
Query: 433 EMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
EM + +P+ +T L+ G C + A ++ D L +++I+G+
Sbjct: 465 EMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSG 524
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +IE + P ATF +LI + + EA +L ++K P +
Sbjct: 525 CIEEALELFKVVIE-TGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSY 583
Query: 553 VQYISKF---GTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLY---- 604
+ + G + E + + + P++ Y +F+ +H +L
Sbjct: 584 TTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIF 643
Query: 605 -KCPHHIR 611
KC +R
Sbjct: 644 EKCKQGLR 651
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/331 (19%), Positives = 123/331 (37%), Gaps = 52/331 (15%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N+ T+ +L L + + + ++++ + G +DI Y + + K +E+A++LF
Sbjct: 474 NSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 533
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINN-----------------PDLGLVFRVANKYESL 367
+ +++ PSV + L+ N P + + + Y +
Sbjct: 534 KVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANC 593
Query: 368 GNSLS----------------KSVYDGIHRALTKLGR------------FDEAEKMMKAM 399
GN+ S Y I + L + + F++ ++ ++ M
Sbjct: 594 GNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDM 653
Query: 400 KNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEV 459
++ G PD ITY+ +I LC+ A L+ M+ T+ ILI C +
Sbjct: 654 ESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYI 713
Query: 460 DRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK---VRLRPWQAT 516
+A + E+N LI + A KL +++ + V +R + A
Sbjct: 714 RKADSFIYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAV 773
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
L + L + E+ LM Q P
Sbjct: 774 INRLCRRHL----VNESKFFFCLMLSQGISP 800
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 34/213 (15%)
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGF---------------EPD 407
K+ES G V+D + ++L D++ ++K MK+ E D
Sbjct: 161 KWESTG-----LVWDMLLFLSSRLRMVDDSLYILKKMKDQNLNVSTQSYNSVLYHFRETD 215
Query: 408 NI-------------TYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
+ TYS V+ GLC+ + EDA L E P + ++ ++ G+C
Sbjct: 216 KMWDVYKEIKDKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYC 275
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
VD A F +++ ++LING + A +L +M K + P
Sbjct: 276 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDS 334
Query: 515 ATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
T+ L + + A ++R M + P
Sbjct: 335 VTYNILAKGFHLLGMISGAWEVIRDMLDKGLSP 367
>sp|Q9FH87|PP447_ARATH Putative pentatricopeptide repeat-containing protein At5g65820
OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1
Length = 637
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 165/351 (47%), Gaps = 16/351 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + +EL + VL R LG FF W + Y H+ Y ++++L++
Sbjct: 104 LNESGVELRPGLIERVLN--RCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMR 161
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+KE ++ + + ++ + ++F M++ A+++ + M ++P
Sbjct: 162 QFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVF 221
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V A +E + ++ + + ++G+ EA+ ++
Sbjct: 222 GCLLDALCK-----HGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLV 276
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
M AGFEPD + Y+ ++ G AG+ DA ++L +M G P+ +T+LIQ C +
Sbjct: 277 QMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVD 336
Query: 458 EVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATF 517
++ A+ F +M +AD L++GF +++ Y +L +MI+K L P + T+
Sbjct: 337 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKK-GLMPSELTY 395
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDA 565
++ EE + L+ M++ Y P ++ K G V++A
Sbjct: 396 MHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEA 446
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 192/479 (40%), Gaps = 25/479 (5%)
Query: 88 ELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQ 147
EL P L VL + + FF W + ++ S VY M++ L
Sbjct: 110 ELRPGLIER----VLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGA 165
Query: 148 FWVTLRRM-KEDHCYIEEETYLSIL------GVLKKAKKASDLAALNQFHDGMVKEIAMD 200
W + M KE+ IE E ++ ++ ++KKA + D F +
Sbjct: 166 VWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD-------E 218
Query: 201 NVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDN---FVLTVLKELRIYPVKALGFFRWVG 257
V L+D + K EDM++ N F + R+ + +
Sbjct: 219 YVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQM 278
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+G++ + + Y +L A + D ++++ +M++ G+E + + Y + + K M
Sbjct: 279 NEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRM 338
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
E+A+K+F M + V + L+ D + V + G S+ Y
Sbjct: 339 EEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYI--VLDDMIKKGLMPSELTYM 396
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
I A K F+E ++M+ M+ + PD Y+ VI CK G ++A + +EMEEN
Sbjct: 397 HIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNY--DADADLLDVLINGFLSQKRVN 495
G P + T+ I+I G + + A F +M+ + + L +L+N L K++
Sbjct: 457 GLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLE 516
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A + + K ++ I L +EA + M + ++ P P+ F +
Sbjct: 517 MAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAK 575
>sp|Q9LN22|PPR54_ARATH Pentatricopeptide repeat-containing protein At1g20300,
mitochondrial OS=Arabidopsis thaliana GN=At1g20300 PE=2
SV=1
Length = 537
Score = 113 bits (283), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 177/409 (43%), Gaps = 65/409 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTI-TYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDT 303
++L FF W Y H + YN ++ + + VR F W++++ MK E+ I+T
Sbjct: 132 QSLAFFNWATSRDDYDHKSPHPYNEMIDLSGK---VRQFDLAWHLIDLMKSRNVEISIET 188
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK 363
+ + R++ + + +AV F M D P S+++ ++S R A++
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRK---------RRASE 239
Query: 364 YESLGNSLSKS------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFG 417
+S +SL VY + R + G EAEK+ K MK AG EP+ TYS VI
Sbjct: 240 AQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 418 LC-----------------------------------KAGRFEDACNVLDEMEENGCIPD 442
LC KAGR E V ++M++ GC PD
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPD 359
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI+ HC ++ A+ M++K + +A + + ++ VNGA+++
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF--- 559
+M+E + P T+ L+ +G++ + + + + M + P + ++ F
Sbjct: 420 KMME-AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 560 GTVEDASEFLKALSVKE---YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G +A + K + V+E PS + Y V G+ + ++L+ K
Sbjct: 479 GHWNNAYKLFKEM-VEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEK 526
>sp|Q9LUR2|PP238_ARATH Putative pentatricopeptide repeat-containing protein At3g16710,
mitochondrial OS=Arabidopsis thaliana GN=At3g16710 PE=3
SV=1
Length = 507
Score = 113 bits (282), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 158/351 (45%), Gaps = 11/351 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G++ + +T+ +L + D + +++ G++ ++ TY + R K R + A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGI 379
V+LF M +P+V + L+ + I D + R K N ++ + +
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVIT---FTAL 264
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
A K+G+ EA+++ M PD TY +I GLC G ++A + ME NGC
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P+ +T LI G C + V+ + F +M +K A+ VLI G+ R + A +
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQ----NYPPFPEPFVQY 555
+ +M + R P T+ L++ L ++E+A+ + M+K+ N + +Q
Sbjct: 385 VFNQMSSR-RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTY-TIIIQG 442
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K G VEDA + +L K P+ Y + F G +EA L K
Sbjct: 443 MCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/333 (23%), Positives = 141/333 (42%), Gaps = 19/333 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+K N +TY ++R L ++ + + +M G ++ TY + + DA
Sbjct: 183 GFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDA 242
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
L MM +P+V + L+ + + G + Y + + SVY +
Sbjct: 243 AWLLRDMMKRRIEPNVITFTALIDAFVKV-----GKLMEAKELYNVM---IQMSVYPDVF 294
Query: 381 ------RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
L G DEA +M M+ G P+ + Y+ +I G CK+ R ED + EM
Sbjct: 295 TYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM 354
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
+ G + + T+T+LIQG+C D A F +M + D +VL++G +V
Sbjct: 355 SQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKV 414
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
A ++ E + K + T+ +I+ + ++E+A +L + + P +
Sbjct: 415 EKAL-MIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTT 473
Query: 555 YISKF---GTVEDASEFLKALSVKEY-PSSAAY 583
IS F G + +A K + + P+ + Y
Sbjct: 474 MISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 134/309 (43%), Gaps = 11/309 (3%)
Query: 303 TYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVAN 362
+Y KI R DA+ LF M+ PS+ D + LL I+ +N D+ V +
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDV--VISLFE 107
Query: 363 KYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAG 422
+ + LG + + + + A + M GFEPD +T++ ++ G C
Sbjct: 108 QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWN 167
Query: 423 RFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLD 482
R EDA + D++ G P++ T+T LI+ C ++ A+ F +M + +
Sbjct: 168 RIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYN 227
Query: 483 VLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
L+ G R A LL +M+++ R+ P TF LI+ + +L EA L +M +
Sbjct: 228 ALVTGLCEIGRWGDAAWLLRDMMKR-RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286
Query: 543 QNYPPFPEPF-----VQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRH 596
+ +P+ F + + +G +++A + + YP+ Y + F R
Sbjct: 287 MSV--YPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRV 344
Query: 597 YEAKDLLYK 605
+ + Y+
Sbjct: 345 EDGMKIFYE 353
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 155/355 (43%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + N++ +M+K E D+ Y + K+R ++DA
Sbjct: 200 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDA 259
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF M + +P V S L+ + + R ++ L + L + +
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYG--------RWSDASRLLSDMLERKINPNVV 311
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + A K G+ EAEK+ M +P+ +TY+ +I G C R ++A + M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C+PD+ T+ LI G C A +V + F M + + LI+GF
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A + +M+ + P T+ TL++ L +LE+AM + ++K P +
Sbjct: 432 DNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNI 490
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + K G VED + +LS+K P AY + F +G EA L K
Sbjct: 491 MSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Score = 110 bits (274), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 7/339 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY + +T N +L + + +V++M + GY+ D T+ + + +A
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEA 189
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L E M+ +P + ++ + PDL L + NK E +Y +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL--NLLNKMEKGKIEADVVIYSTVI 247
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + M N G PD TYS +I LC GR+ DA +L +M E
Sbjct: 248 DSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKIN 307
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI ++ A F +M++++ D + + LINGF R++ A ++
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
M+ K L P T+ TLI A+++ + M L R M ++ + I F
Sbjct: 368 FTLMVSKDCL-PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFF 426
Query: 561 TVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGR 595
D F + +S +P+ Y + + G+
Sbjct: 427 QASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGK 465
Score = 89.7 bits (221), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ A+ + + + +EM + + +I TY + F +++A ++F
Sbjct: 309 NVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIF 368
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
M+ P V + L+ G+ +FR ++ +GN+++ Y +
Sbjct: 369 TLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVT---YTTLIHGF 425
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ E A V + ++++ PDI
Sbjct: 426 FQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI 485
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+ +G C A +V+ F + K D + +I+GF + AY L ++
Sbjct: 486 YTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK 545
Query: 504 MIEKVRLRPWQATFKTLI 521
M E L P T+ TLI
Sbjct: 546 MKEDGPL-PDSGTYNTLI 562
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 139/336 (41%), Gaps = 42/336 (12%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR +++AV LF M+ PS+ + S LL +I+ + DL + F K E
Sbjct: 35 KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISF--GEKME 92
Query: 366 SLGNSLSKSVYD----------------GIHRALTKLG-------------------RFD 390
LG S + Y+ I + KLG R
Sbjct: 93 ILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRIS 152
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
EA ++ M G++PD +T++ ++ GL + + +A +++ M GC PD+ T+ +I
Sbjct: 153 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 212
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C E D AL KM + +AD + +I+ + V+ A L EM K +
Sbjct: 213 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNK-GI 271
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASE 567
RP T+ +LI L R +A LL M ++ P F I F G + +A +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 568 FLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ + P+ Y + F R EA+ +
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 8/192 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TYN ++ + + V D + +M + G + TY + F + ++A +F
Sbjct: 379 DVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQKSKMEPDIYTYNIMSE 493
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +PD I Y+ +I G CK G E+A + +M+E+G +P
Sbjct: 494 GMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLP 553
Query: 442 DIKTWTILIQGH 453
D T+ LI+ H
Sbjct: 554 DSGTYNTLIRAH 565
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 14/380 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E +G N + YN ++ L + + V + + +++ + + D+ TY + K +
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEF 313
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
E +++ + M+ + PS S L+ + + L LV RV + G S + V
Sbjct: 314 EIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD----FGVSPNLFV 369
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y+ + +L K +F EAE + M G P+++TYS +I C+ G+ + A + L EM
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G + + LI GHC ++ A A+M+ K + L+ G+ S+ ++N
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A +L EM K + P TF TL+ L A + +A+ L M + N P +
Sbjct: 490 KALRLYHEMTGK-GIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 556 ISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAK---DLLYKCPH 608
I + G + A EFLK ++ K P + +Y + G+ EAK D L+K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNC 608
Query: 609 HIRQDSKISLLFGSAKSNKV 628
+ + LL G + K+
Sbjct: 609 ELNEICYTGLLHGFCREGKL 628
Score = 80.5 bits (197), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/359 (21%), Positives = 147/359 (40%), Gaps = 29/359 (8%)
Query: 246 PVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE-----------------SVRDFWNV 288
P L FF ++G H G+ H+T ++ ++ L + D +NV
Sbjct: 84 PKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNV 143
Query: 289 VEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDG-PYKPSVQDCSLLLRSIS 347
+ ++ ++ + + + + R + D V +F+ M+ P V+ S LL +
Sbjct: 144 LFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLV 203
Query: 348 SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
+ GL + N S+G +Y G+ R+L +L A++M+ M+ G + +
Sbjct: 204 KFRH--FGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVN 261
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+ Y+ +I GLCK + +A + ++ PD+ T+ L+ G C E + L
Sbjct: 262 IVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMD 321
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M+ + + L+ G + ++ A L+ +++ + P + LI+ L
Sbjct: 322 EMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLFVYNALIDSLCKG 380
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFL-----KALSVKEYP 578
R+ EA L M K P + I F G ++ A FL L + YP
Sbjct: 381 RKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYP 439
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/420 (22%), Positives = 165/420 (39%), Gaps = 35/420 (8%)
Query: 125 FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLA 184
RP +Y+ ++R+L L + + M+ C + Y ++ L K +K +
Sbjct: 223 IRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAV 282
Query: 185 ALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRI 244
+ + G K++ D V + L + +IG +E+ D + LR
Sbjct: 283 GIKKDLAG--KDLKPDVVTYCTLVYGLCKVQEFEIG-------LEMMDEMLC-----LRF 328
Query: 245 YPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY 304
P +A + ++ L + + + N+V+ + G ++ Y
Sbjct: 329 SPSEA------------------AVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 305 IKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY 364
+ K R +A LF+ M +P+ S+L+ D L F +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF--LGEM 428
Query: 365 ESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRF 424
G LS Y+ + K G AE M M N EP +TY+ ++ G C G+
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 425 EDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVL 484
A + EM G P I T+T L+ G A + A+ F +M E N + +V+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 485 INGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQN 544
I G+ + ++ A++ L EM EK + P +++ LI L + EA + + K N
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEK-GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 139/338 (41%), Gaps = 16/338 (4%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+G K + YN ++ + + + EM + E + TY + + +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLV---FRVANKYESLGNSLSKSVY 376
A++L+ M PS+ + LL + GL+ ++ N+ ++ Y
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRA-----GLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + G +A + +K M G PD +Y +I GLC G+ +A +D + +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
C + +T L+ G C +++ AL +M+++ D D VLI+G L K
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
+ LL EM ++ L+P + ++I+ +EA + LM + P + I
Sbjct: 666 FFGLLKEMHDR-GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVI 724
Query: 557 S---KFGTVEDASEFLKALSVKEYPSSAAYLQVFESFF 591
+ K G V +A + L K P S+ QV F
Sbjct: 725 NGLCKAGFVNEA----EVLCSKMQPVSSVPNQVTYGCF 758
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 140/348 (40%), Gaps = 13/348 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+TY ++ + + EM +G I T+ + + ++ DAVKLF
Sbjct: 471 TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLF 530
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + KP+ ++++ D+ F + G Y + L
Sbjct: 531 NEMAEWNVKPNRVTYNVMIEGYCE--EGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G+ EA+ + + E + I Y+ ++ G C+ G+ E+A +V EM + G D+
Sbjct: 589 LTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLV 648
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK---LL 501
+ +LI G + DR L F ++++ +D DV+ + K G +K +
Sbjct: 649 CYGVLIDG--SLKHKDRKL--FFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGI 704
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF-- 559
+++ P + T+ +I L A + EA L M+ + P + ++
Sbjct: 705 WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK 764
Query: 560 GTV--EDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
G V + A E A+ ++A Y + F +GR EA +L+ +
Sbjct: 765 GEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITR 812
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/299 (23%), Positives = 117/299 (39%), Gaps = 39/299 (13%)
Query: 257 GEHSG-YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
G H G + N I Y G+L R + + +V +EM + G ++D+ Y + K +
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHK 661
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
+ L + M D KP + ++ + S D F + + + G ++
Sbjct: 662 DRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG--DFKEAFGIWDLMINEGCVPNEVT 719
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYS----------------------- 412
Y + L K G +EAE + M+ P+ +TY
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 413 ------------QVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
+I G C+ GR E+A ++ M +G PD T+T +I C N+V
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKT 519
+A+ + M EK D + LI+G + A +L EM+ + L P T +T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQ-GLIPNNKTSRT 897
>sp|Q9LQ15|PPR95_ARATH Pentatricopeptide repeat-containing protein At1g62914,
mitochondrial OS=Arabidopsis thaliana GN=At1g62914 PE=2
SV=1
Length = 528
Score = 110 bits (276), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 7/343 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T N +L + D +V++M + GY+ D T+ + +A
Sbjct: 143 GYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEA 202
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M+ +P + ++ + + DL L + NK E+ + +Y +
Sbjct: 203 VALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLAL--NLLNKMEAAKIEANVVIYSTVI 260
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+L K D+A + M+N G P+ ITYS +I LC GR+ DA +L +M E
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKIN 320
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T++ LI ++ +A + +M++++ D + LINGF R+ A ++
Sbjct: 321 PNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQM 380
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
L MI K L P T+ TLI A+R+++ M L R M ++ + I F
Sbjct: 381 LELMIRKDCL-PNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 561 TVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEGRHYEA 599
D F + +SV +P+ Y + + G+ +A
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 482
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DA+ LF M PS+ + S LL +I+ +N DL + F K E LG S + Y
Sbjct: 59 LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISF--GEKMEILGISHNLYTY 116
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + R A ++ M G+EPD +T + ++ G C R DA ++D+M E
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + +
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M E ++ + T+I+ L R ++A+NL M+ + P + I
Sbjct: 237 ALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 295
Query: 557 S---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS L + K P+ + + ++F +G+ +A+ L
Sbjct: 296 SCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 93/195 (47%), Gaps = 4/195 (2%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + EEM K + +I TY + F + +A ++
Sbjct: 322 NLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML 381
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L+ D G+ +FR ++ +GN+++ Y +
Sbjct: 382 ELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVT---YTTLIHGF 438
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ A V + ++ + PDI
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498
Query: 444 KTWTILIQGHCAANE 458
T+ I+I+G C A +
Sbjct: 499 YTYNIMIEGMCKAGK 513
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 122/269 (45%), Gaps = 7/269 (2%)
Query: 222 KLEDMKIELSDNFVLTVLKELRIYPVK--ALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
K+E KIE + TV+ L Y + AL F + E+ G + N ITY+ ++ L +
Sbjct: 243 KMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM-ENKGVRPNVITYSSLISCLCNY 301
Query: 280 ESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
D ++ +M + ++ T+ + F K + A KL+E M+ P++
Sbjct: 302 GRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTY 361
Query: 340 SLLLRSISSINN-PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
S L+ ++ + + + + + L N ++ Y+ + K R D+ ++ +
Sbjct: 362 SSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVT---YNTLINGFCKAKRVDKGMELFRE 418
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G + +TY+ +I G +A ++A V +M G P+I T+ IL+ G C +
Sbjct: 419 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 478
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLING 487
+ +A++ F + + D +++I G
Sbjct: 479 LAKAMVVFEYLQRSTMEPDIYTYNIMIEG 507
>sp|P0C8A0|PP275_ARATH Pentatricopeptide repeat-containing protein At3g49730
OS=Arabidopsis thaliana GN=At3g49730 PE=2 SV=1
Length = 638
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 176/387 (45%), Gaps = 18/387 (4%)
Query: 223 LEDMKIELSDNFVLTVLKELRIYPVKALG--FFRWVGEHSGYKHNTITYNGILRVLARHE 280
L + I+L ++ VL R LG FF W + GY H+ ++ +L++
Sbjct: 88 LNESGIDLRPGLIIRVLS--RCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMR 145
Query: 281 SVRDFWNVVEEMKKEGYEM-DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDC 339
W ++EEM+K E+ + + ++ + R+F M++ AV++ + M +P
Sbjct: 146 QFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVF 205
Query: 340 SLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV--YDGIHRALTKLGRFDEAEKMMK 397
LL ++ G V + +E + ++ + + + G+ EA++++
Sbjct: 206 GCLLDALCKN-----GSVKEASKVFEDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLV 260
Query: 398 AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAAN 457
MK AG EPD + ++ ++ G AG+ DA +++++M + G P++ +T+LIQ C
Sbjct: 261 QMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTE 320
Query: 458 E-VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQAT 516
+ +D A+ F +M +AD LI+GF ++ Y +L +M +K + P Q T
Sbjct: 321 KRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK-GVMPSQVT 379
Query: 517 FKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALS 573
+ ++ + EE + L+ MK++ P ++ K G V++A +
Sbjct: 380 YMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEME 439
Query: 574 VKEY-PSSAAYLQVFESFFNEGRHYEA 599
P ++ + F ++G EA
Sbjct: 440 ANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 87.8 bits (216), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 120/273 (43%), Gaps = 2/273 (0%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + +L R + + V+ +MK+ G E DI + + + M DA L
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M ++P+V ++L++++ + RV + E G Y +
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEK-RMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K G D+ ++ M+ G P +TY Q++ K +FE+ ++++M+ GC PD+
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
+ ++I+ C EV A+ + +M D ++INGF SQ + A EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 505 IEK-VRLRPWQATFKTLIEKLLGARRLEEAMNL 536
+ + + P T K+L+ L+ +LE A ++
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDV 506
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/268 (21%), Positives = 90/268 (33%), Gaps = 42/268 (15%)
Query: 261 GYKHNTITYNGILRVLARHESVRD-FWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
G++ N Y +++ L R E D V EM++ G E DI TY + F K+ M++
Sbjct: 301 GFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDK 360
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+ + M PS + + ++ + K + G +Y+ +
Sbjct: 361 GYSVLDDMRKKGVMPS--QVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVV 418
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG- 438
R KLG EA ++ M+ G P T+ +I G G +ACN EM G
Sbjct: 419 IRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGI 478
Query: 439 --------------------------------------CIPDIKTWTILIQGHCAANEVD 460
C ++ WTI I A V
Sbjct: 479 FSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVK 538
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGF 488
A MME + + L+ G
Sbjct: 539 EACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 89/221 (40%), Gaps = 25/221 (11%)
Query: 251 GFFRWVGEHSGYK-----------HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEM 299
GF +W GY + +TY I+ + E + ++E+MK+ G
Sbjct: 351 GFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHP 410
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ Y + R K +++AV+L+ M P V +++ +S G +
Sbjct: 411 DLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS-----QGFLIE 465
Query: 360 VANKYESLGNS--LSKSVYDGIHRALTKLGRFDEAEKMMKAM------KNAGFEPDNITY 411
N ++ + + S Y + L L R D+ E M K + K + E + +
Sbjct: 466 ACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE-MAKDVWSCISNKTSSCELNVSAW 524
Query: 412 SQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQG 452
+ I L G ++AC+ +M E +P T+ L++G
Sbjct: 525 TIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKG 565
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 153/376 (40%), Gaps = 38/376 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G H+ TY+ + R + V+ +M K GYE DI T + + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSIN-----------------NPDLGLVFRVANK 363
V L + M++ YKP + L+ + N PDL V N
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232
Query: 364 YESLGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
G+ SL K +Y+ I L K D+A + M N G PD
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TYS +I LC GR+ DA +L +M E P++ T++ LI ++ A +
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M++++ D D LINGF R++ A + MI K P T+ TLI+ A
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYSTLIKGFCKA 411
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTVEDASE----FLKALSVKEYPSSAAY 583
+R+EE M L R M ++ + I F D F + +SV +P+ Y
Sbjct: 412 KRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471
Query: 584 LQVFESFFNEGRHYEA 599
+ + G+ +A
Sbjct: 472 NILLDGLCKNGKLAKA 487
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 137/290 (47%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + + LL +++ +N +L V + + ++LG S Y
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL--VISLGEQMQTLGISHDLYTY 121
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A ++ M G+EPD +T S ++ G C + R DA ++D+M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A LL +M EK ++ + T+I+ L + +++A+NL M + P + I
Sbjct: 242 ALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLI 300
Query: 557 S---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
S +G DAS L + K P+ + + ++F EG+ EA+ L
Sbjct: 301 SCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Score = 91.7 bits (226), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 131/282 (46%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V S L++ + G+ +FR ++ +GN+++ Y +
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YTTLIHGF 443
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G P+ +TY+ ++ GLCK G+ A V + ++ + PDI
Sbjct: 444 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 503
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A LL +
Sbjct: 504 YTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKK 563
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P T+ TLI L E + L++ M+ +
Sbjct: 564 MKEDGPL-PNSGTYNTLIRARLRDGDREASAELIKEMRSCGF 604
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 97/193 (50%), Gaps = 4/193 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L+ + + D+A + M + P + +++++ + K +FE ++ ++M+ G D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T++I I C +++ AL AKMM+ Y+ D L L+NG+ KR++ A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
+M+E + +P TF TLI L + EA+ L+ M ++ P + V + K
Sbjct: 178 QMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 560 GTVEDASEFLKAL 572
G ++ A LK +
Sbjct: 237 GDIDLALSLLKKM 249
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 104/225 (46%), Gaps = 8/225 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TY+ +++ + + V + + EM + G + TY + F + R ++A +F
Sbjct: 397 NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 456
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P++ ++LL + N L V +E L S + Y+ +
Sbjct: 457 KQMVSVGVHPNILTYNILLDGLC--KNGKLAKAMVV---FEYLQRSTMEPDIYTYNIMIE 511
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ ++ + G P+ I Y+ +I G C+ G E+A ++L +M+E+G +P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
+ T+ LI+ + + + +M + DA + ++ N
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 616
>sp|Q94JX6|PP391_ARATH Pentatricopeptide repeat-containing protein At5g18390,
mitochondrial OS=Arabidopsis thaliana GN=At5g18390 PE=2
SV=2
Length = 459
Score = 109 bits (273), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 47/390 (12%)
Query: 221 KKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHE 280
+ L +++ ++ FV VL+ +L FF W + Y ++ Y + + LA H+
Sbjct: 66 RSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASHK 125
Query: 281 SVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCS 340
W ++++MK ++ +T I Q+ K ++ AV+LF +
Sbjct: 126 KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP------------ 173
Query: 341 LLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMK 400
++LG + VY+ + AL + F A +++ M
Sbjct: 174 ------------------------KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMI 209
Query: 401 NAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVD 460
G +PD TY+ ++ G C AG+ ++A LDEM G P + +LI+G A ++
Sbjct: 210 RKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLE 269
Query: 461 RALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIE---KVRLRPWQATF 517
A +KM + + D ++LI +G + +EM K+ L T+
Sbjct: 270 SAKEMVSKMTKGGFVPDIQTFNILIEAISK----SGEVEFCIEMYYTACKLGLCVDIDTY 325
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE---PFVQYISKFGTVEDASEFLKALSV 574
KTLI + +++EA LL + + PFP P ++ + + G +DA F + V
Sbjct: 326 KTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKV 385
Query: 575 KEYPSS-AAYLQVFESFFNEGRHYEAKDLL 603
K +P + Y + G+ +A + L
Sbjct: 386 KAHPPNRPVYTMLITMCGRGGKFVDAANYL 415
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/369 (20%), Positives = 151/369 (40%), Gaps = 35/369 (9%)
Query: 83 ENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNK 142
E L L +T E V VLR + FFNW + P+S Y + ++L +
Sbjct: 65 ERSLNSLRLPVTSEFVFRVLRATSRSSNDSLRFFNWARSNPSYTPTSMEYEELAKSLASH 124
Query: 143 DSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNV 202
+ W L++MK+ I ET + ++++ K + + +G+ K +
Sbjct: 125 KKYESMWKILKQMKDLSLDISGET---LCFIIEQYGKNGHVDQAVELFNGVPKTLG---- 177
Query: 203 AKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGY 262
+ VDV N +L L +++++ R + G
Sbjct: 178 CQQTVDVY----------------------NSLLHALCDVKMFHGAYALIRRMI--RKGL 213
Query: 263 KHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVK 322
K + TY ++ +++ ++EM + G+ + +E A +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKE 273
Query: 323 LFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHR 381
+ M G + P +Q ++L+ +IS + + ++ A K LG + Y +
Sbjct: 274 MVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK---LGLCVDIDTYKTLIP 330
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A++K+G+ DEA +++ G +P Y+ +I G+C+ G F+DA + +M+ P
Sbjct: 331 AVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPP 390
Query: 442 DIKTWTILI 450
+ +T+LI
Sbjct: 391 NRPVYTMLI 399
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 159/355 (44%), Gaps = 20/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + +N++ +M++ E + Y I K++ M+DA
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF+ M +P+V S L+ + + R ++ L + + + +
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYG--------RWSDASRLLSDMIERKINPDVF 327
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +P +TYS +I G C R ++A + + M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C PD+ T+ LI+G C V+ + F +M ++ + ++LI G
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A ++ EM+ + P T+ TL++ L +LE+AM + +++ P +
Sbjct: 448 DMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G VED + LS+K P AY + F +G EA D L+K
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA-DALFK 560
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 142/301 (47%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + S LL +I+ +N D+ V + + +
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV--VISLGEQMQ 108
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+LG + Y + + + A ++ M G+EP+ +T S ++ G C + R
Sbjct: 109 NLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRIS 168
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M G P+ T+ LI G N+ A+ +M+ K D V++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVV 228
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + + A+ LL +M E+ +L P + T+I+ L + +++A+NL + M+ +
Sbjct: 229 NGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + IS +G DAS L + K P + + ++F EG+ EA+
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 602 L 602
L
Sbjct: 348 L 348
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 15/345 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ ++ R + V+ +M K GYE +I T + + + +
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+AV L + M Y+P+ + L+ + N + L+ R+ K G
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK----GCQPDLVT 223
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G D A ++ M+ EP + Y+ +I GLCK +DA N+ EME
Sbjct: 224 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 283
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G P++ T++ LI C A + M+E+ + D LI+ F+ + ++
Sbjct: 284 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 343
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPE----- 550
A KL EM+++ + P T+ +LI RL+EA + M ++ FP+
Sbjct: 344 EAEKLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC--FPDVVTYN 400
Query: 551 PFVQYISKFGTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
++ K+ VE+ E + +S + ++ Y + + F G
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 133/282 (47%), Gaps = 5/282 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ T++ ++ + + + + +EM K + I TY + F +++A ++F
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P V + L++ + G+ VFR ++ +GN+++ Y+ + + L
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVT---YNILIQGL 441
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+++ K M + G P+ +TY+ ++ GLCK G+ E A V + ++ + P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K D + +I+GF + A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
M E L P + TLI L E + L++ M+ +
Sbjct: 562 MKEDGTL-PNSGCYNTLIRARLRDGDREASAELIKEMRSCGF 602
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 101/226 (44%), Gaps = 10/226 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRMMEDAVKL 323
+ +TYN +++ +++ V + V EM + G + TY I I FQ + A ++
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC-DMAQEI 453
Query: 324 FEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV---YDGIH 380
F+ M+ P++ + LL + + +V +E L S + Y+ +
Sbjct: 454 FKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV-----FEYLQRSKMEPTIYTYNIMI 508
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ K G+ ++ + + G +PD + Y+ +I G C+ G E+A + EM+E+G +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
P+ + LI+ + + + +M + DA + ++ N
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 102/475 (21%), Positives = 197/475 (41%), Gaps = 81/475 (17%)
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHN 265
+ +V+ W L + + FV+ VL+ L+ +A+ +FRW + H
Sbjct: 39 ICNVLETGPWGPSAENTLSALSFKPQPEFVIGVLRRLKDVN-RAIEYFRWYERRTELPHC 97
Query: 266 TITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFE 325
+YN +L V+AR + ++ EM G+ ++T I++ K + + + +
Sbjct: 98 PESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ 157
Query: 326 FMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTK 385
M ++P+ + L+ + S++N+ D+ L + + + LG + ++ + R K
Sbjct: 158 MMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLT--LFQQMQELGYEPTVHLFTTLIRGFAK 215
Query: 386 LGRFDEAEKMMKAMKNA-----------------------------------GFEPDNIT 410
GR D A ++ MK++ G +PD +T
Sbjct: 216 EGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVT 275
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRA-------- 462
Y+ +I LCKA R ++A + + +E+N +P + +I G+ +A + D A
Sbjct: 276 YTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQR 335
Query: 463 --------------LLCFAKM------------MEKNYDADADLLDVLINGFLSQKRVNG 496
L C KM M+K+ + ++LI+ +++
Sbjct: 336 AKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDT 395
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A++L M +K L P T ++++L +++L+EA + M + P F I
Sbjct: 396 AFELRDSM-QKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI 454
Query: 557 ---SKFGTVEDASE-FLKALSVKEYPSSAAYLQVFESFFNEGR----HYEAKDLL 603
K G V+DA + + K L +S Y + ++FFN GR H KD++
Sbjct: 455 DGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 184/477 (38%), Gaps = 78/477 (16%)
Query: 127 PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAAL 186
PS Y+ +L L + + MK+D TY ++ +L +A K L
Sbjct: 341 PSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAA-PNLSTYNILIDMLCRAGK---LDTA 396
Query: 187 NQFHDGMVKEIAMDNV--AKTLVDVVLGSDWDDKIGKKLEDM--KIELSDNFVLTVLKEL 242
+ D M K NV +VD + S D+ E+M K+ D L
Sbjct: 397 FELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSL--- 453
Query: 243 RIYPVKALGFFRWVGE---------HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMK 293
+ LG V + S + N+I Y +++ H D + ++M
Sbjct: 454 ----IDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI 509
Query: 294 KEGYEMDI---DTYIKI---SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSI- 346
+ D+ +TY+ + + +K R M + +K F+ P + S+L+ +
Sbjct: 510 NQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV------PDARSYSILIHGLI 563
Query: 347 -SSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
+ N L + + + G L Y+ + K G+ ++A ++++ MK GFE
Sbjct: 564 KAGFANETYELFYSMKEQ----GCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFE 619
Query: 406 PDNITYSQVIFGLCK-----------------------------------AGRFEDACNV 430
P +TY VI GL K GR ++A +
Sbjct: 620 PTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLI 679
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L+E+ + G P++ TW L+ A E++ AL+CF M E + +LING
Sbjct: 680 LEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCK 739
Query: 491 QKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
++ N A+ EM +K ++P ++ T+I L A + EA L K P
Sbjct: 740 VRKFNKAFVFWQEM-QKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVP 795
Score = 82.4 bits (202), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 187/431 (43%), Gaps = 35/431 (8%)
Query: 149 WVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQF-HDGMVKEIAMDNVAKTLV 207
W ++ + +E TY S++GVL KA + + A+ F H + + T++
Sbjct: 258 WKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDE--AVEMFEHLEKNRRVPCTYAYNTMI 315
Query: 208 DVVLGSDWDDKIGKKLEDMKIE------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSG 261
+ D+ LE + + ++ N +LT L+++ +AL F + + +
Sbjct: 316 MGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD-EALKVFEEMKKDAA 374
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
N TYN ++ +L R + + + + M+K G ++ T + + K + +++A
Sbjct: 375 --PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 322 KLFEFMMDGPYKPSVQD----CSLLLRSISSINNPDLGLVFRVANKY---ESLGNSLSKS 374
+FE M YK D CSL+ LG V RV + Y E + +S ++
Sbjct: 433 AMFEEM---DYKVCTPDEITFCSLI---------DGLGKVGRVDDAYKVYEKMLDSDCRT 480
Query: 375 ---VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
VY + + GR ++ K+ K M N PD + + + KAG E +
Sbjct: 481 NSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMF 540
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
+E++ +PD ++++ILI G A + F M E+ D +++I+GF
Sbjct: 541 EEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKC 600
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+VN AY+LL EM K P T+ ++I+ L RL+EA L K +
Sbjct: 601 GKVNKAYQLLEEMKTK-GFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVI 659
Query: 552 FVQYISKFGTV 562
+ I FG V
Sbjct: 660 YSSLIDGFGKV 670
Score = 80.9 bits (198), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 124/626 (19%), Positives = 241/626 (38%), Gaps = 70/626 (11%)
Query: 29 FTRVTHFFHISSFTASNQSHTSQFHINTCQKIFFSTSPNSSLELILACDWSDELENKLEE 88
F R ++SS + + ++H + ++ + N ++ W EN L
Sbjct: 4 FARTKFCKNLSSLSDNGENHEKPYTFEGNRQ-----TVNDICNVLETGPWGPSAENTLSA 58
Query: 89 LSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQ------------------------ 124
LS K E V+ VLR+L D +A +F W + +
Sbjct: 59 LSFKPQPEFVIGVLRRL-KDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDAL 117
Query: 125 -----------FRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGV 173
F PS M+ V + L++ + ++ M++ Y +++G
Sbjct: 118 DQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGA 177
Query: 174 LKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKL---EDMKIEL 230
+ + L Q ++E+ + ++ G + ++ L ++MK
Sbjct: 178 FSAVNHSDMMLTLFQ----QMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSS 233
Query: 231 SDNFVLTVLKELRIYPVKALG-------FFRWVGEHSGYKHNTITYNGILRVLARHESVR 283
D + VL + I +G FF + E +G K + +TY ++ VL + +
Sbjct: 234 LDADI--VLYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLD 290
Query: 284 DFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLL 343
+ + E ++K Y + + ++A L E PSV + +L
Sbjct: 291 EAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCIL 350
Query: 344 RSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAG 403
+ + D L K ++ N S Y+ + L + G+ D A ++ +M+ AG
Sbjct: 351 TCLRKMGKVDEALKVFEEMKKDAAPNL---STYNILIDMLCRAGKLDTAFELRDSMQKAG 407
Query: 404 FEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRAL 463
P+ T + ++ LCK+ + ++AC + +EM+ C PD T+ LI G VD A
Sbjct: 408 LFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAY 467
Query: 464 LCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEK 523
+ KM++ + ++ + LI F + R +K+ +MI + P T ++
Sbjct: 468 KVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDC 526
Query: 524 LLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYPS- 579
+ A E+ + +K + + P + + + K G + E S+KE
Sbjct: 527 MFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELF--YSMKEQGCV 584
Query: 580 --SAAYLQVFESFFNEGRHYEAKDLL 603
+ AY V + F G+ +A LL
Sbjct: 585 LDTRAYNIVIDGFCKCGKVNKAYQLL 610
Score = 70.5 bits (171), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 14/252 (5%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
+ G +T YN ++ + V + ++EEMK +G+E + TY + K +
Sbjct: 579 KEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRL 638
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKY----ESLGNSLSK 373
++A LFE + +V S L+ G V R+ Y E + L+
Sbjct: 639 DEAYMLFEEAKSKRIELNVVIYSSLIDG--------FGKVGRIDEAYLILEELMQKGLTP 690
Query: 374 SVY--DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
++Y + + AL K +EA ++MK P+ +TY +I GLCK +F A
Sbjct: 691 NLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFW 750
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM++ G P ++T +I G A + A F + D+ + +I G +
Sbjct: 751 QEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Query: 492 KRVNGAYKLLVE 503
R A+ L E
Sbjct: 811 NRAMDAFSLFEE 822
>sp|P0C8Q3|PP326_ARATH Pentatricopeptide repeat-containing protein At4g19890
OS=Arabidopsis thaliana GN=At4g19890 PE=2 SV=1
Length = 701
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 233/516 (45%), Gaps = 46/516 (8%)
Query: 93 LTHESVVYVLRKLDNDPEK--ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWV 150
LTHE + V+ L ++ A FF W ++FR +Y + +L+ +L++
Sbjct: 89 LTHEQAITVVASLASESGSMVALCFFYWAVGFEKFRHFMRLYLVTADSLLANGNLQKAHE 148
Query: 151 TLRRMKEDHCYIEE--ETYLSILGVLKKAKKASDLA----------------ALNQFHDG 192
+R M + I E ++ + + S + A N F +
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 193 MVKEIAMDNVAKTLVDVVLGSDWDDKIGKK---LEDM--KIELSDN----FVLTVLKELR 243
V+ + D+ + L+ V+G D KI + L M + + DN +LT L E
Sbjct: 209 SVRGVVPDSSSYKLM--VIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENG 266
Query: 244 IYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDT 303
+ +A+ +FR + + G+K N I + ++ L + S++ + ++EEM + G++ ++ T
Sbjct: 267 LVN-RAIWYFRKMIDL-GFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYT 324
Query: 304 YIKISRQFQKFRMMEDAVKLF-EFMMDGPYKPSVQDCSLLLRSISS---INNPDLGLVFR 359
+ + K E A +LF + + YKP+V + ++ +N ++
Sbjct: 325 HTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM----- 379
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
+ ++ + G + + Y + K G F A ++M M + GF P+ TY+ I LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
K R +A +L++ G D T+TILIQ C N++++AL F +M + ++AD
Sbjct: 440 KKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMR 499
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRL 539
L ++LI F QK++ + +L +++ + L P + T+ ++I ++ A+
Sbjct: 500 LNNILIAAFCRQKKMKESERLF-QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 540 MKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKAL 572
MK+ P + IS K V++A + +A+
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 12/304 (3%)
Query: 309 RQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL- 367
R F + + +AV + M + PS S+ + + I +LGL+ N ++ +
Sbjct: 155 RNFSEIGRLNEAVGMVMDMQNQGLTPS----SITMNCVLEIA-VELGLIEYAENVFDEMS 209
Query: 368 --GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
G S Y + + G+ EA++ + M GF PDN T + ++ LC+ G
Sbjct: 210 VRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVN 269
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
A +M + G P++ +T LI G C + +A +M+ + + LI
Sbjct: 270 RAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALI 329
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
+G + A++L ++++ +P T+ ++I +L A L MK+Q
Sbjct: 330 DGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGL 389
Query: 546 PPFPEPFVQYIS---KFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKD 601
P + I+ K G+ A E + + + + P+ Y +S + R EA +
Sbjct: 390 FPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYE 449
Query: 602 LLYK 605
LL K
Sbjct: 450 LLNK 453
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 103/247 (41%), Gaps = 5/247 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G+ N TYN + L + + + ++ + G E D TY + ++ K + A
Sbjct: 423 GFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQA 482
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ F M ++ ++ ++L+ + + R+ SLG +K Y +
Sbjct: 483 LAFFCRMNKTGFEADMRLNNILIAAFC--RQKKMKESERLFQLVVSLGLIPTKETYTSMI 540
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
K G D A K MK G PD+ TY +I GLCK ++AC + + M + G
Sbjct: 541 SCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLS 600
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P T L +C N+ A++ + +K + + L+ S+K+V A
Sbjct: 601 PPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALF 657
Query: 501 LVEMIEK 507
+++EK
Sbjct: 658 FQKLLEK 664
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 168/382 (43%), Gaps = 39/382 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ ++ T+N ++ L RH + +V+ M +G + D+ TY + K ++ A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANK--------YESLGNS 370
+ L + M G +P V + ++ ++ + N + L L + NK Y SL
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 371 L---------SKSVYDGIHR--------------ALTKLGRFDEAEKMMKAMKNAGFEPD 407
L S+ + D I R A K G+ EAEK+ M +PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
TYS +I G C R ++A ++ + M C P++ T+ LI+G C A VD + F
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M ++ + LI+GF + + A + +M+ L P T+ L++ L
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVL-PDIMTYSILLDGLCNN 479
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEY-PSSAAY 583
++E A+ + +++ P + ++ + K G VED + +LS+K P+ Y
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 584 LQVFESFFNEGRHYEAKDLLYK 605
+ F +G EA D L++
Sbjct: 540 TTMMSGFCRKGLKEEA-DALFR 560
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 137/326 (42%), Gaps = 42/326 (12%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + S LL +I+ +N DL V + + ++LG S + Y
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL--VISLGEQMQNLGISHNLYTY 119
Query: 377 D----------------GIHRALTKLG-------------------RFDEAEKMMKAMKN 401
+ + KLG R +A ++ M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 402 AGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDR 461
G++PD+ T++ +I GL + R +A ++D M GC PD+ T+ I++ G C ++D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 462 ALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLI 521
AL KM + + + + +I+ + K VN A L EM K +RP T+ +LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK-GIRPNVVTYNSLI 298
Query: 522 EKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVEDASEFLKALSVKEY- 577
L R +A LL M ++ P F I F G + +A + + +
Sbjct: 299 RCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID 358
Query: 578 PSSAAYLQVFESFFNEGRHYEAKDLL 603
P Y + F R EAK +
Sbjct: 359 PDIFTYSSLINGFCMHDRLDEAKHMF 384
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 325 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 384
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ D G+ +FR ++ +GN+++ Y +
Sbjct: 385 ELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVT---YTTLIHGF 441
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ D A+ + K M + G PD +TYS ++ GLC G+ E A V + ++ + PDI
Sbjct: 442 FQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDI 501
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + +++GF + A L E
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFRE 561
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E+ L P T+ TLI L + L+R M+
Sbjct: 562 MKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 598
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 165/382 (43%), Gaps = 38/382 (9%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HN T N +L R + + + +M K G+E I T+ + F + + DA
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVAN--------KYESLGNS 370
+ +F+ M+ YKP+V + ++ + D L L+ R+ Y SL +
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230
Query: 371 LSKS-----------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPD 407
L S ++ + A K GR EAE+ + M +PD
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290
Query: 408 NITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFA 467
+TYS +I+GLC R ++A + M GC PD+ T++ILI G+C + +V+ + F
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350
Query: 468 KMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGA 527
+M ++ + +LI G+ ++N A ++ M+ + P T+ L+ L
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVF-CGVHPNIITYNVLLHGLCDN 409
Query: 528 RRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKE-YPSSAAY 583
++E+A+ +L M+K + ++ + K G V DA + +L+ + P Y
Sbjct: 410 GKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTY 469
Query: 584 LQVFESFFNEGRHYEAKDLLYK 605
+ + +G EA L K
Sbjct: 470 TTMMLGLYKKGLRREADALFRK 491
Score = 82.8 bits (203), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 118/277 (42%), Gaps = 34/277 (12%)
Query: 304 YIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD---------- 353
Y ++ R +F ++D++ LF M+ PS+ D S LL +IS + D
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 354 -----------------------LGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFD 390
L L K LG+ S + + + R
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVY 168
Query: 391 EAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILI 450
+A M M G++P+ + Y+ +I GLCK+ + ++A ++L+ ME++G PD+ T+ LI
Sbjct: 169 DALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 451 QGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
G C++ A + M ++ D + LI+ + + RV+ A + EMI + L
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SL 287
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
P T+ LI L RL+EA + M + P
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFP 324
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 146/363 (40%), Gaps = 18/363 (4%)
Query: 92 KLTHESVVYVLRKLDNDPEKASAFFN--WVCDKK---QFRPSSTVYSLMLRNLVNKDSLK 146
KL HE + L N + ++ ++ D+ ++P+ +Y+ ++ L +
Sbjct: 144 KLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVD 203
Query: 147 QFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVA-KT 205
L RM++D + TY S++ L + + SD A +EI D
Sbjct: 204 NALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD--ATRMVSCMTKREIYPDVFTFNA 261
Query: 206 LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYK-- 263
L+D + + + E+M D ++T L IY + E G+
Sbjct: 262 LIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY--SLLIYGLCMYSRLDEAEEMFGFMVS 319
Query: 264 ----HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+ +TY+ ++ + + V + EM + G + TY + + + + +
Sbjct: 320 KGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNV 379
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
A ++F M+ P++ ++LL + + LV + + G Y+ I
Sbjct: 380 AEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALV--ILADMQKNGMDADIVTYNII 437
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R + K G +A + ++ G PD TY+ ++ GL K G +A + +M+E+G
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGI 497
Query: 440 IPD 442
+P+
Sbjct: 498 LPN 500
>sp|P0C8R0|PP416_ARATH Putative pentatricopeptide repeat-containing protein At5g43820
OS=Arabidopsis thaliana GN=At5g43820 PE=3 SV=1
Length = 546
Score = 107 bits (267), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 219 IGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLAR 278
I K L + I LS + V VL + + FF W G + +Y+ ILR L R
Sbjct: 104 IQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGR 163
Query: 279 HESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ +V++ M EG D++ F + + A++LFE K S +
Sbjct: 164 RKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTES 223
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ LLR + ++ A K +S S Y+ + +KLG +E EK++K
Sbjct: 224 FNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS---YNIMISGWSKLGEVEEMEKVLKE 280
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M +GF PD ++YS +I GL + GR D+ + D ++ G +PD + +I +A +
Sbjct: 281 MVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARD 340
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
D ++ + +M+++ + + + L++G + ++V+ A ++ EM+ +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSR 389
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 8/215 (3%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDF---WNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
+H G + YN ++ S RDF M E E +++TY K+ K
Sbjct: 317 KHKGNVPDANVYNAMI---CNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS 374
R + DA+++FE M+ P+ + L+ + S P +V + K G +S+S
Sbjct: 374 RKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMV--IYQKSRKAGCRISES 431
Query: 375 VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + + L++ G+ + M+ +G+ D Y ++ GLC G E+A V++E
Sbjct: 432 AYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEA 491
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKM 469
G P+ ++ L A+N+ + A F K+
Sbjct: 492 MRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKI 526
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/250 (20%), Positives = 111/250 (44%), Gaps = 3/250 (1%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
SG+ + ++Y+ ++ L R + D + + +K +G D + Y + F R ++
Sbjct: 284 SGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDE 343
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
+++ + M+D +P+++ S L+ + I + + + S G + +
Sbjct: 344 SMRYYRRMLDEECEPNLETYSKLVSGL--IKGRKVSDALEIFEEMLSRGVLPTTGLVTSF 401
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
+ L G A + + + AG Y ++ L + G+ NV DEM+E+G
Sbjct: 402 LKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGY 461
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D++ + ++ G C ++ A+L + M K + + + L + ++ + AYK
Sbjct: 462 PSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYK 521
Query: 500 LLVEMIEKVR 509
L ++ I+K R
Sbjct: 522 LFLK-IKKAR 530
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 117/312 (37%), Gaps = 51/312 (16%)
Query: 40 SFTASNQSHTSQFHINTCQKIFFSTSPNSSLEL----ILACDWS-----DELENKLEELS 90
SF A + + H++ + +F + N + I+ WS +E+E L+E+
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 91 PK------LTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDS 144
L++ ++ L + + F N K P + VY+ M+ N ++
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDN--IKHKGNVPDANVYNAMICNFISARD 340
Query: 145 LKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAK 204
+ RRM ++ C ETY ++ L K +K SD AL F + + + +
Sbjct: 341 FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSD--ALEIFEEMLSRGVLP----- 393
Query: 205 TLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIY-PVKALGFFRWVGEHSGYK 263
+ V + LK L Y P A +G +
Sbjct: 394 --------------------------TTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCR 427
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
+ Y +L+ L+R NV +EM++ GY D++ Y I +E+AV +
Sbjct: 428 ISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLV 487
Query: 324 FEFMMDGPYKPS 335
E M + P+
Sbjct: 488 MEEAMRKGFCPN 499
>sp|Q9SSF9|PP123_ARATH Pentatricopeptide repeat-containing protein At1g74750
OS=Arabidopsis thaliana GN=At1g74750 PE=2 SV=1
Length = 855
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 155/330 (46%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 309 WGHAAEEALHNFGFRMDAYQANQVLKQMDNY-ANALGFFYWLKRQPGFKHDGHTYTTMVG 367
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + + +++EM ++G + + TY ++ + + +++A+ +F M + +P
Sbjct: 368 NLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEP 427
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + + G S Y I L K G A
Sbjct: 428 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAA 483
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
++ M G P+ +T++ +I KA +E A + +M+ G PD T++I+++
Sbjct: 484 HRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEV 543
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC ++ A FA+M KN+ D + +L++ + V+ A++ M++ L
Sbjct: 544 LGHCGF--LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ-AGL 600
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L R+ EA NLL+ M
Sbjct: 601 RPNVPTCNSLLSTFLRVHRMSEAYNLLQSM 630
Score = 85.5 bits (210), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 115/249 (46%), Gaps = 15/249 (6%)
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
++ I R+F+ E+A+ F F MD + +L+ + + N LG + +
Sbjct: 297 VENVSSILRRFKWGHAAEEALHNFGFRMD------AYQANQVLKQMDNYANA-LGFFYWL 349
Query: 361 ANK--YESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGL 418
+ ++ G++ + V + L + +F E K++ M G +P+ +TY+++I
Sbjct: 350 KRQPGFKHDGHTYTTMVGN-----LGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSY 404
Query: 419 CKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADA 478
+A ++A NV ++M+E GC PD T+ LI H A +D A+ + +M E D
Sbjct: 405 GRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDT 464
Query: 479 DLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLR 538
V+IN + A++L EM+ + P TF +I AR E A+ L R
Sbjct: 465 FTYSVIINCLGKAGHLPAAHRLFCEMVGQ-GCTPNLVTFNIMIALHAKARNYETALKLYR 523
Query: 539 LMKKQNYPP 547
M+ + P
Sbjct: 524 DMQNAGFQP 532
>sp|Q9FNL2|PP418_ARATH Pentatricopeptide repeat-containing protein At5g46100
OS=Arabidopsis thaliana GN=At5g46100 PE=2 SV=1
Length = 472
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 142/314 (45%), Gaps = 7/314 (2%)
Query: 260 SGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMED 319
+GY H+ ++ ++ L + +++ MK E + D + I R + + D
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD 104
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGI 379
++++F M D PS + +L + N L L F+ +G + + + +
Sbjct: 105 SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ--LNLAFKFYKNMREIGLPPTVASLNVL 162
Query: 380 HRALTKL-GRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+AL + G D K+ M G +PD+ TY +I GLC+ GR ++A + EM E
Sbjct: 163 IKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKD 222
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
C P + T+T LI G C + VD A+ +M K + + L++G R A
Sbjct: 223 CAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAM 282
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
+L EM+ RP T+ TLI L ++++EA+ LL M Q P + + IS
Sbjct: 283 ELF-EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISG 341
Query: 559 FGTV---EDASEFL 569
F + +A+ FL
Sbjct: 342 FCAISKFREAANFL 355
Score = 87.4 bits (215), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 196/491 (39%), Gaps = 78/491 (15%)
Query: 90 SPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK--KQFRPSSTVYSLMLRNLVNKDSLKQ 147
S +T V+ ++R + D EK+ A F+ + + + + M+ LV+ + K
Sbjct: 11 SKNITPSQVIKLMRA-EKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKA 69
Query: 148 FWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLV 207
+ RMK ++C + E+ LSI + + D +L FH +K+ D K V
Sbjct: 70 AEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFD--SLRVFHK--MKDFDCDPSQKAYV 125
Query: 208 DVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTI 267
V + +E+ ++ L+ F ++E+ + P A
Sbjct: 126 TV---------LAILVEENQLNLAFKFYKN-MREIGLPPTVA------------------ 157
Query: 268 TYNGILRVLARHESVRDF-WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEF 326
+ N +++ L R++ D + EM K G + D TY + +F +++A KLF
Sbjct: 158 SLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTE 217
Query: 327 MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANK----------YESLGNSLSKS-- 374
M++ P+V + L+ + N D + + K Y SL + L K
Sbjct: 218 MVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGR 277
Query: 375 ---------------------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ 413
Y + L K + EA +++ M G +PD Y +
Sbjct: 278 SLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGK 337
Query: 414 VIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTI-------LIQGHCAANEVDRALLCF 466
VI G C +F +A N LDEM G P+ TW I +++G C AN RA +
Sbjct: 338 VISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLY 396
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M + + + L+ L+ + A +L+ E++ + P + T+K LI L
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCI-PSKGTWKLLIGHTLD 455
Query: 527 ARRLEEAMNLL 537
+ EA + L
Sbjct: 456 KTIVGEASDTL 466
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 97/230 (42%), Gaps = 16/230 (6%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQ-VIFGLCKA-GRFE---DACNVLDEMEEN 437
L +F AE ++ MK +N S+ ++ +C+ GR D+ V +M++
Sbjct: 61 LVSANKFKAAEDLIVRMK-----IENCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDF 115
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL-SQKRVNG 496
C P K + ++ N+++ A + M E L+VLI + V+
Sbjct: 116 DCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDA 175
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
K+ +EM K P T+ TLI L R++EA L M +++ P + I
Sbjct: 176 GLKIFLEM-PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI 234
Query: 557 SKFG---TVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ V++A +L+ + K P+ Y + + +GR +A +L
Sbjct: 235 NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 138/290 (47%), Gaps = 7/290 (2%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++DAV LF M+ PS+ + + LL +++ +N +L V + + ++LG S Y
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL--VISLGEQMQTLGISHDLYTY 121
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + A ++ M G+EPD +T S ++ G C + R DA ++D+M E
Sbjct: 122 SIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PD T+T LI G N+ A+ +M+++ D ++NG + ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---V 553
A LL +M E R++ F T+I+ L R +E A++L M+ + P + +
Sbjct: 242 ALNLLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300
Query: 554 QYISKFGTVEDASEFL-KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ +G DAS L L K P+ + + ++FF EG+ EA+ L
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Score = 103 bits (256), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 7/338 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G H+ TY+ + R + V+ +M K GYE DI T + + + + DA
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
V L + M++ YKP + L+ + N + + ++ G Y +
Sbjct: 173 VALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA--LVDQMVQRGCQPDLVTYGTVV 230
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
L K G D A ++ M+ A + + + ++ +I LCK E A ++ EME G
Sbjct: 231 NGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR 290
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
P++ T+ LI C A + M+EK + + + LI+ F + ++ A KL
Sbjct: 291 PNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 501 LVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFG 560
EMI++ + P T+ LI RL+EA + + M ++ P + + I+ F
Sbjct: 351 HEEMIQR-SIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFC 409
Query: 561 T---VEDASEFLKALSVKE-YPSSAAYLQVFESFFNEG 594
VED E + +S + ++ Y + + FF G
Sbjct: 410 KCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 152/354 (42%), Gaps = 20/354 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + + N++ +M+ + ++ + I K+R +E A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
V LF M +P+V + L+ + + R ++ L N L K +
Sbjct: 278 VDLFTEMETKGIRPNVVTYNSLINCLCNYG--------RWSDASRLLSNMLEKKINPNVV 329
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
++ + A K G+ EAEK+ + M +PD ITY+ +I G C R ++A + M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C+P+I+T+ LI G C V+ + F +M ++ + +I GF
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEP 551
+ A + +M+ R+ T+ L+ L +L+ A+ + + ++K
Sbjct: 450 DSAQMVFKQMVSN-RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNT 508
Query: 552 FVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
++ + K G V +A + +LS+K P Y + ++ EA DL K
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSLSIK--PDVVTYNTMISGLCSKRLLQEADDLFRK 560
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 15/344 (4%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TYN ++ L + D ++ M ++ ++ T+ + F K +
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG-LVFRVANKYESLGNSLSKSVY 376
+A KL E M+ P +LL+ N D +F+ + L N Y
Sbjct: 345 VEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNI---QTY 401
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + K R ++ ++ + M G + +TY+ +I G +AG + A V +M
Sbjct: 402 NTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVS 461
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
N DI T++IL+ G C+ ++D AL+ F + + + + + + +I G +V
Sbjct: 462 NRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE 521
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYI 556
A+ L + ++P T+ T+I L R L+EA +L R MK+ P + I
Sbjct: 522 AWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 557 SKFGTVED-----ASEFLKALSVKEYPSSAAYLQVFESFFNEGR 595
+ D ++E +K + + A+ + + + ++GR
Sbjct: 578 R--ANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHDGR 619
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 105/224 (46%), Gaps = 5/224 (2%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L+ + + D+A + M + P + +++++ + K +FE ++ ++M+ G D
Sbjct: 58 LSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHD 117
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
+ T++I I C +++ AL AKMM+ Y+ D L L+NG+ KR++ A L+
Sbjct: 118 LYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVD 177
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKF 559
+M+E + +P TF TLI L + EA+ L+ M ++ P + V + K
Sbjct: 178 QMVE-MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 560 GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYE-AKDL 602
G ++ A L + ++ + RH E A DL
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDL 280
>sp|Q9S7R4|PP125_ARATH Pentatricopeptide repeat-containing protein At1g74900,
mitochondrial OS=Arabidopsis thaliana GN=OTP43 PE=2 SV=1
Length = 482
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 119/490 (24%), Positives = 205/490 (41%), Gaps = 63/490 (12%)
Query: 64 TSPNSSLELILACDWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDK- 122
+SPN++ + D L K +P L + VL++L N KA FF+++ +
Sbjct: 34 SSPNTTHQ-----DDQFLLSTKTTPWTPNLVNS----VLKRLWNHGPKALQFFHFLDNHH 84
Query: 123 KQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASD 182
+++ ++ + L + W + RM+ +T+ + A K
Sbjct: 85 REYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDK 144
Query: 183 LAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSD-----NFV 235
L N G +++A N T++DV+ S +K + ++ S N +
Sbjct: 145 AVKLFLNMHEHGCFQDLASFN---TILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVI 201
Query: 236 LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKE 295
L ++ P KAL + + E G N TYN +L+ R +R W EMKK
Sbjct: 202 LNGWCLIKRTP-KALEVLKEMVER-GINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKR 259
Query: 296 GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG 355
E+D+ TY + F ++ A +F+ M+ PSV
Sbjct: 260 DCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV------------------- 300
Query: 356 LVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVI 415
+ Y+ + + L K + A M + M G+EP+ TY+ +I
Sbjct: 301 ------------------ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLI 342
Query: 416 FGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYD 475
GL AG F ++ ME GC P+ +T+ ++I+ + +EV++AL F KM +
Sbjct: 343 RGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Query: 476 ADADLLDVLINGFLSQKRVNG---AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEE 532
+ D ++LI+G +KR A KLL+EM+E+ + P + TF ++ LL
Sbjct: 403 PNLDTYNILISGMFVRKRSEDMVVAGKLLLEMVERGFI-PRKFTFNRVLNGLLLTGNQAF 461
Query: 533 AMNLLRLMKK 542
A +LRL K
Sbjct: 462 AKEILRLQSK 471
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 144/350 (41%), Gaps = 34/350 (9%)
Query: 231 SDNFVLTVLKELRIYPVKALGFFRWV-GEHSGYKHNTITYNGILRVLARHESVRDFWNVV 289
+ N V +VLK L + KAL FF ++ H Y H+ +++ + + AR W+++
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 290 EEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMD-GPYKPSVQDCSLL------ 342
M+ T+ ++ ++ + AVKLF M + G ++ ++L
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKS 174
Query: 343 ------------LRSISSINNPDLGLVF-------RVANKYESLGNSLSKSV------YD 377
LR S++ ++ R E L + + + Y+
Sbjct: 175 KRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYN 234
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + + G+ A + MK E D +TY+ V+ G AG + A NV DEM
Sbjct: 235 TMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIRE 294
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G +P + T+ +IQ C + V+ A++ F +M+ + Y+ + +VLI G +
Sbjct: 295 GVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRG 354
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
+L+ M E P T+ +I +E+A+ L M + P
Sbjct: 355 EELMQRM-ENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLP 403
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/291 (19%), Positives = 123/291 (42%), Gaps = 8/291 (2%)
Query: 320 AVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL-GLVFRVANKYESLGNSLSKSVYDG 378
A++ F F+ D ++ V D S +I L V+ + ++ SL S +
Sbjct: 73 ALQFFHFL-DNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAI 131
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ G+ D+A K+ M G D +++ ++ LCK+ R E A + +
Sbjct: 132 VAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRF 191
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ D T+ +++ G C +AL +M+E+ + + + ++ GF ++ A+
Sbjct: 192 SV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAW 250
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF---VQY 555
+ +EM +K T+ T++ A ++ A N+ M ++ P + +Q
Sbjct: 251 EFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQV 309
Query: 556 ISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K VE+A + + + Y P+ Y + F+ G ++L+ +
Sbjct: 310 LCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
>sp|Q9FNG8|PP366_ARATH Putative pentatricopeptide repeat-containing protein At5g06400,
mitochondrial OS=Arabidopsis thaliana GN=At5g06400 PE=3
SV=1
Length = 1030
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 173/396 (43%), Gaps = 7/396 (1%)
Query: 214 DWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGIL 273
DW+ + + LE ++ + V+ VL+ +I L FF WVG+ +GYKHN+ YN +
Sbjct: 627 DWE-RTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 274 RVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYK 333
+V + + ++ EM+++G + DT+ + Q+ + + A++ F+ M D
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI 745
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS L+ + ++ R + G + + L ++G +A+
Sbjct: 746 PSSSTFKCLITVLCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAK 805
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
+ ++ GF P + YS I LC+ G+ E+A + L E + D T+ ++ G
Sbjct: 806 SCLDSLGKIGF-PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGL 864
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
++ +AL M E + LI F +K++ + +M E P
Sbjct: 865 LQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKM-EGESCEPS 923
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLK 570
T+ +I + ++EEA N R M+++ P + + ++I+ EDA + L
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLS 983
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ K PS+ + VF EG+H A+ L K
Sbjct: 984 EMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
Score = 99.4 bits (246), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 157/356 (44%), Gaps = 10/356 (2%)
Query: 195 KEIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFR 254
+E+ V + VV G D + +LE + V VLK P A+ FF
Sbjct: 118 EEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFN 177
Query: 255 WVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKF 314
WV + G+ H YN +L + ++ +V EM+K G + DI T+ + + K
Sbjct: 178 WVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKA 237
Query: 315 RMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL---GNSL 371
+ + + +FE M ++ ++++RS+ DL L F Y+ + G +
Sbjct: 238 KKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEF-----YKEMMEKGITF 292
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
Y + + K + D + + M ++ + ++ C +G+ ++A ++
Sbjct: 293 GLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELI 352
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
E++ D K + IL++G C AN + AL M + D D+++ ++I+G+L Q
Sbjct: 353 RELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQ 411
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
V+ A + E+I+K P +T+ +++ L ++ E+ NL M + P
Sbjct: 412 NDVSKALEQF-EVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 51/400 (12%)
Query: 82 LENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML----- 136
+E++LE+LS + E V VL++ P A FFNWV K F +Y+ ML
Sbjct: 142 MEDRLEKLSFRFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGE 201
Query: 137 -RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVK 195
RNL D L + M+++ C + T+ ++ V KAKK
Sbjct: 202 ARNLDMVDEL------VSEMEKNGCDKDIRTWTILISVYGKAKK---------------- 239
Query: 196 EIAMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVK--ALGFF 253
+ K L+ + +K+ EL +++ L I AL F+
Sbjct: 240 ------IGKGLL-----------VFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFY 282
Query: 254 RWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQK 313
+ + E G TY +L +A+ E V ++ ++M + + D + + + F
Sbjct: 283 KEMMEK-GITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCV 341
Query: 314 FRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSK 373
+++A++L + + + +L++ + N L K L +S
Sbjct: 342 SGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKLDDS--- 398
Query: 374 SVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDE 433
+VY I + +A + + +K +G P TY++++ L K +FE CN+ +E
Sbjct: 399 NVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNE 458
Query: 434 MEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
M ENG PD T ++ GH N V A F+ M EK
Sbjct: 459 MIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKG 498
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 164/407 (40%), Gaps = 54/407 (13%)
Query: 77 DWSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLML 136
DW + + LE+ + + T E VV VLR FF+WV + ++ +S Y++ +
Sbjct: 627 DW-ERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSI 685
Query: 137 RNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKE 196
+ KQ M+ C I ++T+ + +++ + A+ F
Sbjct: 686 KVAGCGKDFKQMRSLFYEMRRQGCLITQDTW--AIMIMQYGRTGLTNIAIRTF------- 736
Query: 197 IAMDNVAKTLVDVVLGSDWDDKIGKKLEDMK-IELSDNF--VLTVLKELRIYPV-KALGF 252
K+++DM I S F ++TVL E + V +A
Sbjct: 737 ------------------------KEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRT 772
Query: 253 FRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQ 312
FR + SG+ + L L + +D + ++ + K G+ + + I I R
Sbjct: 773 FREM-IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYI-RALC 830
Query: 313 KFRMMEDAV-KLFEF-----MMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ +E+A+ +L F ++D S+ LL R DL N +
Sbjct: 831 RIGKLEEALSELASFEGERSLLDQYTYGSIVH-GLLQRG-------DLQKALDKVNSMKE 882
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
+G VY + K + ++ + + M+ EP +TY+ +I G G+ E+
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEE 942
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKN 473
A N MEE G PD KT++ I C A + + AL ++M++K
Sbjct: 943 AWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 106 bits (265), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 165/353 (46%), Gaps = 23/353 (6%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTY-IKISRQFQKFRM 316
E G N + YN I+ R D +VE+M++EG DI T+ +IS ++ ++
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 317 MEDAVKLFEFM-MD---GPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS-- 370
+ DA ++F M +D G +P+ +L+L+ + GL+ +ES+ +
Sbjct: 269 L-DASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKV-----GLLEDAKTLFESIRENDD 322
Query: 371 -LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACN 429
S Y+ + L + G+F EAE ++K M + G P +Y+ ++ GLCK G DA
Sbjct: 323 LASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKT 382
Query: 430 VLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
++ M+ NG PD T+ L+ G+C+ +VD A +MM N +A ++L++
Sbjct: 383 IVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLW 442
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
R++ A +LL +M EK T +++ L G+ L++A+ +++ M+
Sbjct: 443 KMGRISEAEELLRKMNEK-GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALG 501
Query: 550 EPFVQYISKFGTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
YI G V+D+ + P Y + GR EAK+L
Sbjct: 502 NLGNSYI---GLVDDS-----LIENNCLPDLITYSTLLNGLCKAGRFAEAKNL 546
Score = 86.3 bits (212), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 139/297 (46%), Gaps = 11/297 (3%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
++ A +LF+ M + KP+ +L+R D GL + N ES G +K +Y
Sbjct: 163 VDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGL--ELLNAMESFGVLPNKVIY 220
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ I + + GR D++EKM++ M+ G PD +T++ I LCK G+ DA + +ME
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 437 NGCI----PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQK 492
+ + P+ T+ ++++G C ++ A F + E + A ++ + G +
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340
Query: 493 RVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF 552
+ A +L +M +K + P ++ L++ L L +A ++ LMK+ P +
Sbjct: 341 KFIEAETVLKQMTDK-GIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 553 VQYISKF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESFFNEGRHYEAKDLLYK 605
+ + G V+ A L+ + P++ + S + GR EA++LL K
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRK 456
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 113/275 (41%), Gaps = 13/275 (4%)
Query: 300 DIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFR 359
D+ TY + K +A LF MM +P ++ + + FR
Sbjct: 523 DLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCK--QGKISSAFR 580
Query: 360 VANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLC 419
V E G S Y+ + L + E +M MK G P+ TY+ I LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 420 KAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADAD 479
+ + EDA N+LDEM + P++ ++ LI+ C + D A F + +
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEG- 699
Query: 480 LLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ-ATF--KTLIEKLLGARRLEEAMNL 536
L ++ N L+ ++ A E++E V R ++ TF K L+E L LE A +
Sbjct: 700 LYSLMFNELLAAGQLLKA----TELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 537 LRLMKKQNY---PPFPEPFVQYISKFGTVEDASEF 568
L M + Y P P + + K G ++A+ F
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSF 790
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 114/258 (44%), Gaps = 15/258 (5%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N T N +L L + + + ++ +M ++GY +D T I ++ A+++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
+ M V + ++ ++ N +GLV + L + ++ Y + L
Sbjct: 490 KGM-------RVHGSA----ALGNLGNSYIGLVDDSLIENNCLPDLIT---YSTLLNGLC 535
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
K GRF EA+ + M +PD++ Y+ I CK G+ A VL +ME+ GC ++
Sbjct: 536 KAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLE 595
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEM 504
T+ LI G N++ +M EK + + I ++V A LL EM
Sbjct: 596 TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Query: 505 IEKVRLRPWQATFKTLIE 522
++K + P +FK LIE
Sbjct: 656 MQK-NIAPNVFSFKYLIE 672
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 142/338 (42%), Gaps = 26/338 (7%)
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
R F + +E + + +D I+R + +M E+ +L ++ + + L
Sbjct: 21 RIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSIQKTKLSSLLS 80
Query: 343 LRSISSINN------PDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMM 396
+ SI + +N P LV +++ N S +Y+ + + K R + +
Sbjct: 81 VVSIFAKSNHIDKAFPQFQLV---RSRFPE--NKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 397 KAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAA 456
K M G P T++ +I LC + + A + DEM E GC P+ T+ IL++G+C A
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 457 NEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVR---LRPW 513
D+ L M + + + +++ F + R + + K M+EK+R L P
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEK----MVEKMREEGLVPD 251
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP-------FVQYISKFGTVEDAS 566
TF + I L ++ +A + M+ Y P P ++ K G +EDA
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 567 EFLKALSVK-EYPSSAAYLQVFESFFNEGRHYEAKDLL 603
+++ + S +Y + G+ EA+ +L
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVL 349
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 3/181 (1%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + TYN ++ L + + +++EMK++G +I TY + + +
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA L + MM P+V L+ + + PD + V S+ + +Y
Sbjct: 646 EDATNLLDEMMQKNIAPNVFSFKYLIEAFCKV--PDFDMAQEVFETAVSICGQ-KEGLYS 702
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ L G+ +A ++++A+ + GFE Y ++ LCK E A +L +M +
Sbjct: 703 LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDR 762
Query: 438 G 438
G
Sbjct: 763 G 763
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 105 bits (263), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 143/343 (41%), Gaps = 10/343 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
++ G HN TY+ + R + ++ +M K GY I T + F +
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSV 375
+AV L + M++ Y+P + L+ + N + LV R+ K G
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVK----GCQPDLVT 217
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + L K G D A ++ M+ E D + Y+ +I GLCK +DA ++ ++ME
Sbjct: 218 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKME 277
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
G PD+ T+ LI C A + M+EKN + D + LI+ F+ + ++
Sbjct: 278 TKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLV 337
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A KL EM++ P + TLI+ +R+EE M + R M ++ +
Sbjct: 338 EAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTL 397
Query: 556 ISKFGTVEDASE----FLKALSVKEYPSSAAYLQVFESFFNEG 594
I F D F + +S +P Y + + N G
Sbjct: 398 IHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNG 440
Score = 96.3 bits (238), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 7/300 (2%)
Query: 307 ISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYES 366
+SR+ + ++DA+ LF M+ PS+ + S LL +I+ +N DL V + + ++
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDL--VISLGEQMQN 103
Query: 367 LGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFED 426
LG S + Y + + A ++ M G+ P +T + ++ G C R +
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISE 163
Query: 427 ACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLIN 486
A ++D+M E G PD T+T L+ G N+ A+ +M+ K D +IN
Sbjct: 164 AVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 223
Query: 487 GFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYP 546
G + + A LL +M EK ++ + T+I+ L + +++A +L M+ +
Sbjct: 224 GLCKRGEPDLALNLLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 547 P---FPEPFVQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
P P + + +G DAS L + K P + + ++F EG+ EA+ L
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Score = 85.9 bits (211), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 149/372 (40%), Gaps = 38/372 (10%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + +TY ++ L + N++ +M+K E D+ Y I K++ M+DA
Sbjct: 210 GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDA 269
Query: 321 VKLFEFMMDGPYKPSV----------------QDCSLLLRSISSIN-NPDLGLVFRVANK 363
LF M KP V D S LL + N NPDL + +
Sbjct: 270 FDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDA 329
Query: 364 Y---------ESLGNSLSKS--------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEP 406
+ E L + + KS Y+ + + K R +E ++ + M G
Sbjct: 330 FVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 389
Query: 407 DNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCF 466
+ +TY+ +I G +A ++A V +M +G PDI T+ IL+ G C V+ AL+ F
Sbjct: 390 NTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVF 449
Query: 467 AKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLG 526
M +++ D +I +V + L + K ++P T+ T++
Sbjct: 450 EYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCR 508
Query: 527 ARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLKALSVKEYPSSAAY 583
EEA L MK+ P + I + G ++E +K + + A+
Sbjct: 509 KGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDAST 568
Query: 584 LQVFESFFNEGR 595
+ + ++GR
Sbjct: 569 FGLVTNMLHDGR 580
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 94/226 (41%), Gaps = 5/226 (2%)
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
A+ K+ +FD + + M+N G + TYS I C+ + A +L +M + G P
Sbjct: 84 AIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGP 143
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLL 501
I T L+ G C N + A+ +M+E Y D L++G + + A L+
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203
Query: 502 VEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISK 558
M+ K +P T+ +I L + A+NLL M+K + + K
Sbjct: 204 ERMVVK-GCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCK 262
Query: 559 FGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLL 603
+ ++DA + + K P Y + N GR +A LL
Sbjct: 263 YKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Score = 62.8 bits (151), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 87/182 (47%), Gaps = 1/182 (0%)
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
S + S + + R + + + D+A + M + P + +S+++ + K +F+
Sbjct: 33 SFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFD 92
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
++ ++M+ G ++ T++I I C +++ AL KMM+ Y L+ L+
Sbjct: 93 LVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLL 152
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NGF R++ A L+ +M+E + +P TF TL+ L + EA+ L+ M +
Sbjct: 153 NGFCHGNRISEAVALVDQMVE-MGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGC 211
Query: 546 PP 547
P
Sbjct: 212 QP 213
>sp|Q9ZUU3|PP190_ARATH Pentatricopeptide repeat-containing protein At2g37230
OS=Arabidopsis thaliana GN=At2g37230 PE=2 SV=1
Length = 757
Score = 105 bits (263), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 43/377 (11%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W ++ + D+ E + V VL + AL FFRW +H+ T+ +++
Sbjct: 100 WTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLE-HALQFFRWTERSGLIRHDRDTHMKMIK 158
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
+L + ++ +M ++G D D ++ + + K +++++VK+F+ M D
Sbjct: 159 MLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKD----- 213
Query: 335 SVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEK 394
LG + Y+ + + + + GR+ A++
Sbjct: 214 --------------------------------LGVERTIKSYNSLFKVILRRGRYMMAKR 241
Query: 395 MMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHC 454
M + G EP TY+ +++G + R E A ++M+ G PD T+ +I G C
Sbjct: 242 YFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFC 301
Query: 455 AANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQ 514
++D A F +M +I G+L+ RV+ ++ EM + P
Sbjct: 302 RFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM-RSSGIEPNA 360
Query: 515 ATFKTLIEKLLGARRLEEAMNLLR-LMKKQNYPPFPEPFVQYI---SKFGTVEDASEFLK 570
T+ TL+ L A ++ EA N+L+ +M K P F++ + SK G + A+E LK
Sbjct: 361 TTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLK 420
Query: 571 ALSVKEYPSSAAYLQVF 587
A++ P+ A + V
Sbjct: 421 AMATLNVPAEAGHYGVL 437
Score = 87.0 bits (214), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 129/545 (23%), Positives = 212/545 (38%), Gaps = 97/545 (17%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLR 137
W+ L+N + +L P+ H S+VY + E A FF W R + M++
Sbjct: 100 WTTRLQNSIRDLVPEWDH-SLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIK 158
Query: 138 NLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEI 197
L L L M E +E+ ++ ++ KA G+V+E
Sbjct: 159 MLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKA--------------GIVQES 204
Query: 198 AMDNVAKTLVDVVLGSDWDDKIGKKLEDMKIEL---SDNFVLTVLKELRIYPVKALGFFR 254
KI +K++D+ +E S N + V+ Y + F +
Sbjct: 205 V-------------------KIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNK 245
Query: 255 WVGEHSGYKHNTITYN----GILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQ 310
V E G + TYN G L ++R F E+MK G D T+ +
Sbjct: 246 MVSE--GVEPTRHTYNLMLWGFFLSLRLETALRFF----EDMKTRGISPDDATFNTMING 299
Query: 311 FQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNS 370
F +F+ M++A KLF M PSV + +++ +++
Sbjct: 300 FCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVD-------------------- 339
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
R D+ ++ + M+++G EP+ TYS ++ GLC AG+ +A N+
Sbjct: 340 -----------------RVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNI 382
Query: 431 LDEMEENGCIP-DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFL 489
L M P D + L+ A ++ A M N A+A VLI
Sbjct: 383 LKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAEAGHYGVLIENQC 442
Query: 490 SQKRVNGAYKLLVEMIEKVRLRPWQAT-------FKTLIEKLLGARRLEEAMNLLR-LMK 541
N A KLL +IEK + Q T + +IE L + +A L R LMK
Sbjct: 443 KASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMK 502
Query: 542 K--QNYPPFPEPFVQYISKFGTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYE 598
+ Q+ ++ +K G + + E LK +S + P S AY + +S+ ++G +
Sbjct: 503 RGVQDQDAL-NNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKGEPGD 561
Query: 599 AKDLL 603
AK L
Sbjct: 562 AKTAL 566
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 103/241 (42%), Gaps = 11/241 (4%)
Query: 371 LSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNV 430
+ S Y+ I L G+ +AE + + + G + D + +I G K G + + +
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 431 LDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLS 490
L M G + + +LI+ + + E A M+E + D+ L +I
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 491 QKRVNGAYKLLVEMIEK-VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFP 549
RV A ++++ MI+K V + ++E LL +EEA+ + L+ + +
Sbjct: 591 DGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVEEALGRIDLLNQNGHTADL 650
Query: 550 EPFVQYISKFGTVEDASEFL-----KALSVKEYPSSAAYLQVFESFFNEGRHYEAKDLLY 604
+ + +S+ G A + L + LS+ E+ S Y +V ++ G+ A +L
Sbjct: 651 DSLLSVLSEKGKTIAALKLLDFGLERDLSL-EFSS---YDKVLDALLGAGKTLNAYSVLC 706
Query: 605 K 605
K
Sbjct: 707 K 707
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 10/179 (5%)
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAM--KNAGFEPDNITYSQVIFGLCKAGRFE 425
G+ S++ + +L + GR A ++M M KN G E + ++++ L G E
Sbjct: 573 GHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLIAKILEALLMRGHVE 632
Query: 426 DACNVLDEMEENGCIPDIKTWTILI--QGHCAANEVDRALLCFAKMMEKNYDADADLLDV 483
+A +D + +NG D+ + ++ +G A AL +E++ + D
Sbjct: 633 EALGRIDLLNQNGHTADLDSLLSVLSEKGKTIA-----ALKLLDFGLERDLSLEFSSYDK 687
Query: 484 LINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK 542
+++ L + AY +L +++EK W+++ LI+ L ++A L R++KK
Sbjct: 688 VLDALLGAGKTLNAYSVLCKIMEKGSSTDWKSS-DELIKSLNQEGNTKQADVLSRMIKK 745
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 124/567 (21%), Positives = 231/567 (40%), Gaps = 36/567 (6%)
Query: 80 DELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNL 139
D L N +++P +Y L +L + + F+W + +R S VY +++ L
Sbjct: 67 DSLRNSFHKITP-----FQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKL 121
Query: 140 VNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAM 199
K L +MK++ +E ++SI ++ KA + M +
Sbjct: 122 GANGEFKTIDRLLIQMKDEGIVFKESLFISI---MRDYDKAGFPGQTTRLMLEMRNVYSC 178
Query: 200 DNVAKT---LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLKELRIYPV-----KALG 251
+ K+ ++++++ + DM + T ++ + AL
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238
Query: 252 FFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
R + +H G N++ Y ++ L++ V + ++EEM G D +T+ +
Sbjct: 239 LLRDMTKH-GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGL 297
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGN 369
KF + +A K+ M+ + P L+ + I D L +R+ + N
Sbjct: 298 CKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFN 357
Query: 370 SLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNA-GFEPDNITYSQVIFGLCKAGRFEDAC 428
+L IH +T GR D+A+ ++ M + G PD TY+ +I+G K G A
Sbjct: 358 TL-------IHGFVTH-GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLAL 409
Query: 429 NVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGF 488
VL +M GC P++ ++TIL+ G C ++D A +M + + LI+ F
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 489 LSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPF 548
+ R+ A ++ EM K +P TF +LI L ++ A+ LLR M +
Sbjct: 470 CKEHRIPEAVEIFREMPRK-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528
Query: 549 PEPFVQYISKF---GTVEDASEFLKALSVKEYP-SSAAYLQVFESFFNEGRHYEAKDLLY 604
+ I+ F G +++A + + + + P Y + + G +A+ L
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 605 KCPHHIRQDSKIS---LLFGSAKSNKV 628
K S IS L+ G +S V
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMV 615
Score = 99.4 bits (246), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 111/498 (22%), Positives = 209/498 (41%), Gaps = 74/498 (14%)
Query: 112 ASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSIL 171
A+ F++ + ++ P+ + ++++ + + LR M + C Y +++
Sbjct: 202 ANVFYDML--SRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLI 259
Query: 172 GVLKKAKKASDLAAL--NQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKI---GKKLEDM 226
L K + ++ L F G V + A+T DV+LG D+I K + M
Sbjct: 260 HSLSKCNRVNEALQLLEEMFLMGCVPD------AETFNDVILGLCKFDRINEAAKMVNRM 313
Query: 227 KI------ELSDNFVLTVLKEL-RIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARH 279
I +++ +++ L ++ R+ K L F+R K + +N ++ H
Sbjct: 314 LIRGFAPDDITYGYLMNGLCKIGRVDAAKDL-FYRIP------KPEIVIFNTLIHGFVTH 366
Query: 280 ESVRDFWNVVEEMKKE-GYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQD 338
+ D V+ +M G D+ TY + + K ++ A+++ M + KP+V
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 339 CSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
++L+ DG KLG+ DEA ++
Sbjct: 427 YTILV---------------------------------DG----FCKLGKIDEAYNVLNE 449
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M G +P+ + ++ +I CK R +A + EM GC PD+ T+ LI G C +E
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW-QATF 517
+ AL M+ + A+ + LIN FL + + A KL+ EM+ + P + T+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV--FQGSPLDEITY 567
Query: 518 KTLIEKLLGARRLEEAMNLLRLMKKQNYPP---FPEPFVQYISKFGTVEDASEFLKALSV 574
+LI+ L A +++A +L M + + P + + + G VE+A EF K + +
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 575 KEYPSSAAYLQVFESFFN 592
+ S + F S N
Sbjct: 628 R---GSTPDIVTFNSLIN 642
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G K NT+ +N ++ + + + + EM ++G + D+ T+ + + ++ A
Sbjct: 454 GLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA 513
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIH 380
+ L M+ + + L+ + + ++ ++ N+ G+ L + Y+ +
Sbjct: 514 LWLLRDMISEGVVANTVTYNTLINAF--LRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 381 RALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCI 440
+ L + G D+A + + M G P NI+ + +I GLC++G E+A EM G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 441 PDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKL 500
PDI T+ LI G C A ++ L F K+ + D + L++ V A L
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLL 691
Query: 501 LVEMIEKVRL---RPWQATFKTLI-EKLLGARRLEEA 533
L E IE + R W +++I ++ L RR A
Sbjct: 692 LDEGIEDGFVPNHRTWSILLQSIIPQETLDRRRFYNA 728
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 157/355 (44%), Gaps = 19/355 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
GY+ + +T ++ R V D ++V++M + GY+ DI Y I K + + DA
Sbjct: 150 GYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDA 209
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
F+ + +P+V + L+ + + + R ++ L + + K +
Sbjct: 210 FDFFKEIERKGIRPNVVTYTALVNGLCNSS--------RWSDAARLLSDMIKKKITPNVI 261
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
Y + A K G+ EA+++ + M +PD +TYS +I GLC R ++A + D M
Sbjct: 262 TYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLM 321
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
GC+ D+ ++ LI G C A V+ + F +M ++ ++ + LI GF V
Sbjct: 322 VSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDV 381
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQ 554
+ A + +M + + P T+ L+ L LE+A+ + M+K+ +
Sbjct: 382 DKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTT 440
Query: 555 YI---SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
I K G VE+A +LS+K P Y + +G +E + L K
Sbjct: 441 VIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 106/231 (45%), Gaps = 3/231 (1%)
Query: 317 MEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVY 376
+ DA+ LF M+ PS+ D + LL +I + D +V + K E LG +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYD--VVISLGKKMEVLGIRNDLYTF 123
Query: 377 DGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE 436
+ + + A ++ M G+EPD +T ++ G C+ R DA +++D+M E
Sbjct: 124 NIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 437 NGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNG 496
G PDI + +I C V+ A F ++ K + L+NG + R +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 497 AYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
A +LL +MI+K ++ P T+ L++ + ++ EA L M + + P
Sbjct: 244 AARLLSDMIKK-KITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Score = 72.8 bits (177), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 90/200 (45%), Gaps = 4/200 (2%)
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
++ + A+ KL ++D + K M+ G D T++ VI C + A ++L +M
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+ G PD T L+ G C N V A+ KM+E Y D + +I+ KRVN
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVN 207
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A+ E IE+ +RP T+ L+ L + R +A LL M K+ P +
Sbjct: 208 DAFDFFKE-IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSAL 266
Query: 556 ISKF---GTVEDASEFLKAL 572
+ F G V +A E + +
Sbjct: 267 LDAFVKNGKVLEAKELFEEM 286
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 110/241 (45%), Gaps = 4/241 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N ITY+ +L ++ V + + EEM + + DI TY + +++A ++F
Sbjct: 259 NVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
+ M+ V + L+ + G+ +FR ++ + N+++ Y+ + +
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVT---YNTLIQGF 375
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D+A++ M G PD TY+ ++ GLC G E A + ++M++ DI
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+T +I+G C +V+ A F + K D +++G ++ ++ L +
Sbjct: 436 VTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTK 495
Query: 504 M 504
M
Sbjct: 496 M 496
Score = 70.1 bits (170), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 98/201 (48%), Gaps = 5/201 (2%)
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
P + +++++ + K +++ ++ +ME G D+ T+ I+I C +V AL
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
KM++ Y+ D + L+NGF + RV+ A L+ +M+E + +P + +I+ L
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE-IGYKPDIVAYNAIIDSLC 201
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKFGTV---EDASEFLKALSVKEY-PSSA 581
+R+ +A + + ++++ P + ++ DA+ L + K+ P+
Sbjct: 202 KTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVI 261
Query: 582 AYLQVFESFFNEGRHYEAKDL 602
Y + ++F G+ EAK+L
Sbjct: 262 TYSALLDAFVKNGKVLEAKEL 282
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 102/234 (43%), Gaps = 10/234 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
+ +TY+ ++ L H+ + + + + M +G D+ +Y + F K + +ED +KLF
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLF 353
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALT 384
M + + L++ + D F ++ + G S Y+ + L
Sbjct: 354 REMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF--FSQMDFFGISPDIWTYNILLGGLC 411
Query: 385 KLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIK 444
G ++A + + M+ + D +TY+ VI G+CK G+ E+A ++ + G PDI
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 445 TWTILIQGHCAANEVDRALLCFAKMMEKNY--------DADADLLDVLINGFLS 490
T+T ++ G C + + KM ++ D D L LI LS
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS 525
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 150/346 (43%), Gaps = 28/346 (8%)
Query: 254 RWVGE--HSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQF 311
+W E G N +TY ++ + + V + E M EG +I TY +
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 312 QKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSL 371
K +E A ++FE R S + PD+ + F+ +Y+
Sbjct: 599 CKAGQVEKACQIFE------------------RMCGSKDVPDVDMYFK---QYDDNSERP 637
Query: 372 SKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVL 431
+ Y + K R +EA K++ AM G EP+ I Y +I GLCK G+ ++A V
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 432 DEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQ 491
EM E+G + T++ LI + D A +KM+E + + + +I+G
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 492 KRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEP 551
+ + AYKL+ +M+E+ +P T+ +I+ ++E + LL M + P
Sbjct: 758 GKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Query: 552 F---VQYISKFGTVEDASEFLKALSVKEYPS-SAAYLQVFESFFNE 593
+ + + K G ++ A L+ + +P+ +A Y +V E F E
Sbjct: 817 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 133/584 (22%), Positives = 246/584 (42%), Gaps = 77/584 (13%)
Query: 86 LEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFRPSSTVYSLMLRNLVNKDSL 145
L + KL+ V+ VLR L P +FF W + ++ ++ VY+ ++ +V D
Sbjct: 123 LRQFREKLSESLVIEVLR-LIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDDE 181
Query: 146 KQFWVTLRRMKEDHCYIEEETYLSILGVL--KKAKKASDLAALNQFHDGMVKEIAMDNVA 203
K L+++++D ++E + L VL K + S AL + G +K+
Sbjct: 182 KVPEEFLQQIRDD----DKEVFGEFLNVLVRKHCRNGSFSIALEEL--GRLKDFRFRPSR 235
Query: 204 KT---LVDVVLGSDWDD-----------------------------KIGKKLEDMKIELS 231
T L+ L +D D K+GK E + + +
Sbjct: 236 STYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVET 295
Query: 232 DNFV---------LTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESV 282
+NFV ++ L E ++ +A+ F + S N +TY+ +L + +
Sbjct: 296 ENFVPDTVFYTKLISGLCEASLFE-EAMDFLNRMRATSCLP-NVVTYSTLLCGCLNKKQL 353
Query: 283 RDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLL 342
V+ M EG + + + A KL + M+ + P ++L
Sbjct: 354 GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNIL 413
Query: 343 LRSIS----SINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKA 398
+ SI S+N L L + ++ + G L+K R L G++++A +++
Sbjct: 414 IGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIRE 473
Query: 399 MKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANE 458
M GF PD TYS+V+ LC A + E A + +EM+ G + D+ T+TI++ C A
Sbjct: 474 MIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGL 533
Query: 459 VDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFK 518
+++A F +M E + LI+ +L K+V+ A +L M+ + L P T+
Sbjct: 534 IEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCL-PNIVTYS 592
Query: 519 TLIEKLLGARRLEEAMNLL-RLMKKQNYPPFPEPFVQY--------ISKFGT-------- 561
LI+ A ++E+A + R+ ++ P F QY + +G
Sbjct: 593 ALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKS 652
Query: 562 --VEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
VE+A + L A+S++ P+ Y + + G+ EA+++
Sbjct: 653 HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 87/209 (41%), Gaps = 6/209 (2%)
Query: 258 EHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMM 317
E G + N +TY ++ + ++E M +G + TY + K +
Sbjct: 771 EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGAL 830
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
+ A L E M + ++ + LGL+ + + SVY
Sbjct: 831 DVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQD----DTAPFLSVYR 886
Query: 378 GIHRALTKLGRFDEAEKMMK--AMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
+ L K R + A ++++ A +A + TY+ +I LC A + E A + EM
Sbjct: 887 LLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMT 946
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALL 464
+ G IP+++++ LI+G +++ ALL
Sbjct: 947 KKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Score = 42.0 bits (97), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 102/242 (42%), Gaps = 12/242 (4%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N + Y ++ L + + + +++ M+++G + ++ TY + F +E ++L
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLG--LVFRVANKYESLGNSLSKSVYDGIHRA 382
E M P+ +L+ D+ L+ + + + + V +G ++
Sbjct: 803 ERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKE 862
Query: 383 LTK-LGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEE-NGCI 440
+ LG DE + A P Y +I L KA R E A +L+E+ + +
Sbjct: 863 FIESLGLLDEIGQDDTA-------PFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATL 915
Query: 441 PDIK-TWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
D T+ LI+ C AN+V+ A F++M +K + LI G +++ A
Sbjct: 916 VDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALL 975
Query: 500 LL 501
LL
Sbjct: 976 LL 977
>sp|P0C7R3|PP106_ARATH Pentatricopeptide repeat-containing protein At1g64583,
mitochondrial OS=Arabidopsis thaliana GN=At1g64583 PE=2
SV=1
Length = 512
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 171/410 (41%), Gaps = 44/410 (10%)
Query: 235 VLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKK 294
+LT LR Y + + +F E G H+ ++ ++ R + +V+ +M K
Sbjct: 77 LLTATANLRRY--ETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK 134
Query: 295 EGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDL 354
GYE I T+ + F + DA L M+ Y+P+V + L+ + N +L
Sbjct: 135 LGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC--KNGEL 192
Query: 355 GLVFRVANKYESLG--------NSL-------------SKSVYDGIHRAL---------- 383
+ + N+ E G N+L ++ + D + R++
Sbjct: 193 NIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTAL 252
Query: 384 ----TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
K G DEA+++ K M + +P+N+TY+ +I GLC GR DA D M GC
Sbjct: 253 IDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGC 312
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
P++ T+ LI G C VD + F +M + ++AD + LI+G+ ++ A
Sbjct: 313 FPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALD 372
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKK-QNYPPFP--EPFVQYI 556
+ M+ + R+ P T L+ L +E A+ M++ + Y + +
Sbjct: 373 IFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 557 SKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDLLYK 605
K VE A E L V+ P + Y + G EA +L+ +
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 124/277 (44%), Gaps = 7/277 (2%)
Query: 318 EDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYD 377
EDA LF M+ PS+ D + LL + +++ + + F + K E G S +
Sbjct: 53 EDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYF--SQKMELYGISHDLYSFT 110
Query: 378 GIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEEN 437
+ + R A ++ M G+EP +T+ ++ G C R DA +++ M ++
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 438 GCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGA 497
G P++ + LI G C E++ AL +M +K AD + L+ G R + A
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDA 230
Query: 498 YKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS 557
++L +M+++ + P TF LI+ + L+EA L + M + + P + I+
Sbjct: 231 ARMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 558 KF---GTVEDASEFLKALSVKE-YPSSAAYLQVFESF 590
G + DA + ++ K +P+ Y + F
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGF 326
Score = 67.0 bits (162), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 147/389 (37%), Gaps = 75/389 (19%)
Query: 122 KKQFRPSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYIEEETYLSILGVLKKAKKAS 181
K + P+ VY+ ++ L L L M++ + TY ++L L + + S
Sbjct: 169 KSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWS 228
Query: 182 DLAALNQFHDGMVKEIAMDNVAKT-LVDVVLGSDWDDKIGKKLEDMKIELSDNFVLTVLK 240
D A + D M + I D V T L+DV + D+ + ++M
Sbjct: 229 DAARM--LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI------------- 273
Query: 241 ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMD 300
S N +TYN I+ L H + D + M +G +
Sbjct: 274 ------------------QSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 301 IDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRV 360
+ TY + F KFRM+++ +KLF+ M + N D+
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF------------------NADI------ 351
Query: 361 ANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCK 420
Y+ + ++G+ A + M + PD IT+ ++ GLC
Sbjct: 352 -------------FTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCV 398
Query: 421 AGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADL 480
G E A D+M E+ I + I+I G C A++V++A F ++ + DA
Sbjct: 399 NGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDART 458
Query: 481 LDVLINGFLSQKRVNGAYKLLVEMIEKVR 509
++I G NG + E+I +++
Sbjct: 459 YTIMILGLCK----NGPRREADELIRRMK 483
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 96/219 (43%), Gaps = 5/219 (2%)
Query: 388 RFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWT 447
RF++A + M ++ P + +++++ R+E +ME G D+ ++T
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 448 ILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEK 507
ILI C + + AL KMM+ Y+ L++GF R+ A+ L++ M+ K
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMV-K 169
Query: 508 VRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISKF---GTVED 564
P + TLI+ L L A+ LL M+K+ + ++ G D
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 565 ASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
A+ L+ + + P + + + F +G EA++L
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQEL 268
>sp|Q9LR67|PPR9_ARATH Pentatricopeptide repeat-containing protein At1g03560,
mitochondrial OS=Arabidopsis thaliana GN=At1g03560 PE=2
SV=1
Length = 660
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 162/382 (42%), Gaps = 44/382 (11%)
Query: 228 IELSDNFVLTVLK--ELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDF 285
I+LS NFV VLK E+R P A FF W + Y HN Y ++ VLA + V
Sbjct: 112 IKLSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRI 171
Query: 286 WNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRS 345
V E+KK + M + + + F K M+E+ + ++ M + +P++
Sbjct: 172 RFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLY-------- 223
Query: 346 ISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFE 405
Y L N L +++ D AE++ + M++ +
Sbjct: 224 -----------------TYNFLMNGLVSAMF------------VDSAERVFEVMESGRIK 254
Query: 406 PDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLC 465
PD +TY+ +I G CKAG+ + A L +ME G D T+ +IQ A ++ +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 466 FAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLL 525
+ +M EK ++I G + ++N Y + MI K +P A + LI+
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYA 373
Query: 526 GARRLEEAMNLLRLMKKQNYPPFPEPF---VQYISKFGTVEDASEFLKALSVKEYP-SSA 581
+ +E+A+ LL M + + P + V + K G VE+A ++ +S
Sbjct: 374 KSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSM 433
Query: 582 AYLQVFESFFNEGRHYEAKDLL 603
Y + + GR EA+ L
Sbjct: 434 FYSSLIDGLGKAGRVDEAERLF 455
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 146/350 (41%), Gaps = 5/350 (1%)
Query: 256 VGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFR 315
V E K + +TYN +++ + + + +M+ G+E D TY+ + +
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 316 MMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV 375
V L++ M + + SL++ + + G + V G+ + ++
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG--YTVFENMIRKGSKPNVAI 364
Query: 376 YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEME 435
Y + K G ++A +++ M + GF+PD +TYS V+ GLCK GR E+A +
Sbjct: 365 YTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCR 424
Query: 436 ENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVN 495
+G + ++ LI G A VD A F +M EK D+ + LI+ F ++V+
Sbjct: 425 FDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVD 484
Query: 496 GAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY 555
A L M E+ T+ L+ + R EEA+ L +M + P F
Sbjct: 485 EAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRAL 544
Query: 556 ISKF---GTVEDASEFLKALSVKEYPSSAAYLQVFESFFNEGRHYEAKDL 602
+ G V A + L L+ AA + + GR EA L
Sbjct: 545 STGLCLSGKVARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKL 594
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 105/279 (37%), Gaps = 42/279 (15%)
Query: 248 KALGFFRWVGEHSGYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKI 307
+AL +F G N++ Y+ ++ L + V + + EEM ++G D Y +
Sbjct: 415 EALDYFH-TCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNAL 473
Query: 308 SRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESL 367
F K R +++A+ LF+ M E
Sbjct: 474 IDAFTKHRKVDEAIALFKRM------------------------------------EEEE 497
Query: 368 GNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDA 427
G + Y + + K R +EA K+ M + G P + + GLC +G+ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 428 CNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLING 487
C +LDE+ G I D +I C A + A + E+ + + V+IN
Sbjct: 558 CKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINA 616
Query: 488 FLSQKRVNGAYKLLVEMI----EKVRLRPWQATFKTLIE 522
+ + A KL+ I E++ + F TL+E
Sbjct: 617 LRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655
>sp|Q8GYP6|PPR49_ARATH Pentatricopeptide repeat-containing protein At1g18900
OS=Arabidopsis thaliana GN=At1g18900 PE=1 SV=1
Length = 860
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 156/330 (47%), Gaps = 12/330 (3%)
Query: 215 WDDKIGKKLEDMKIELSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILR 274
W + L+++ + + VLK++ Y ALGFF W+ G+KH+ TY ++
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQMNDYG-NALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 275 VLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKP 334
L R + +++EM ++G + + TY ++ + + + +A+ +F M + KP
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 335 S-VQDCSLL-LRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEA 392
V C+L+ + + + L + + + ++ G S Y I L K G A
Sbjct: 433 DRVTYCTLIDIHAKAGF----LDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAA 488
Query: 393 EKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQ- 451
K+ M + G P+ +TY+ ++ KA +++A + +M+ G PD T++I+++
Sbjct: 489 HKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEV 548
Query: 452 -GHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRL 510
GHC E A+ F +M +KN+ D + +L++ + V A++ M+ L
Sbjct: 549 LGHCGYLEEAEAV--FTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH-AGL 605
Query: 511 RPWQATFKTLIEKLLGARRLEEAMNLLRLM 540
RP T +L+ L ++ EA LL+ M
Sbjct: 606 RPNVPTCNSLLSTFLRVNKIAEAYELLQNM 635
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
Query: 383 LTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPD 442
L + +F K++ M G +P+ +TY+++I +A +A NV ++M+E GC PD
Sbjct: 374 LGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPD 433
Query: 443 IKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLV 502
T+ LI H A +D A+ + +M D V+IN + A+KL
Sbjct: 434 RVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFC 493
Query: 503 EMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPP 547
EM+++ P T+ +++ AR + A+ L R M+ + P
Sbjct: 494 EMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Score = 46.6 bits (109), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 61/337 (18%), Positives = 134/337 (39%), Gaps = 55/337 (16%)
Query: 78 WSDELENKLEELSPKLTHESVVYVLRKLDNDPEKASAFFNWVCDKKQFR----------- 126
W E L+ L ++ VL+++ ND A FF W+ + F+
Sbjct: 314 WGPAAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPGFKHDGHTYTTMVG 372
Query: 127 ------------------------PSSTVYSLMLRNLVNKDSLKQFWVTLRRMKEDHCYI 162
P++ Y+ ++ + + L + +M+E C
Sbjct: 373 NLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKP 432
Query: 163 EEETYLSILGVLKKAKKASDLAALNQFHDGMVKEIAMDNVAKTLVDVVLGSDWDDKIGKK 222
+ TY +++ + KA A++ + ++ D +++ LG K
Sbjct: 433 DRVTYCTLIDIHAKAGFLD--IAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHK 490
Query: 223 LEDMKIE-------LSDNFVLTVLKELRIYPVKALGFFRWVGEHSGYKHNTITYNGILRV 275
L ++ ++ N ++ + + R Y AL +R + +++G++ + +TY+ ++ V
Sbjct: 491 LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQ-NALKLYRDM-QNAGFEPDKVTYSIVMEV 548
Query: 276 LARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLFEFMMDGPYKPS 335
L + + V EM+++ + D Y + + K +E A + ++ M+ +P+
Sbjct: 549 LGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPN 608
Query: 336 VQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLS 372
V C+ LL + +N ++A YE L N L+
Sbjct: 609 VPTCNSLLSTFLRVN--------KIAEAYELLQNMLA 637
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 19/352 (5%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G + + TY ++ L + + +++++M+K E D+ Y I ++ + DA
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSV----- 375
+ LF M + +P+V + L+R + + R ++ L + + + +
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYG--------RWSDASRLLSDMIERKINPNVV 326
Query: 376 -YDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEM 434
+ + A K G+ EAEK+ M +PD TYS +I G C R ++A ++ + M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 435 EENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRV 494
C P++ T+ LI+G C A V+ + F +M ++ + + LI G
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 495 NGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPF-- 552
+ A K+ +M+ + P T+ L++ L +LE+A+ + ++K P +
Sbjct: 447 DMAQKIFKKMVSD-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNI 505
Query: 553 -VQYISKFGTVEDASEFLKALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
++ + K G VED + +LS+K P+ Y + F +G EA L
Sbjct: 506 MIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADAL 557
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 129/262 (49%), Gaps = 5/262 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T++ ++ + + + + +EM K + DI TY + F +++A +F
Sbjct: 324 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 383
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
E M+ P+V + L++ + G+ +FR ++ +GN+++ Y+ + + L
Sbjct: 384 ELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT---YNTLIQGL 440
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
+ G D A+K+ K M + G PD ITYS ++ GLCK G+ E A V + ++++ PDI
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDI 500
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
T+ I+I+G C A +V+ F + K + + +I+GF + A L E
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 504 MIEKVRLRPWQATFKTLIEKLL 525
M E L P T+ TLI L
Sbjct: 561 MKEDGTL-PNSGTYNTLIRARL 581
Score = 99.4 bits (246), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 155/356 (43%), Gaps = 29/356 (8%)
Query: 262 YKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAV 321
Y+ NT+T+N ++ L H + +++ M G + D+ TY + K ++ A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 322 KLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDGI 379
L + M G + V + ++ ++ + N + L L + NK G + Y+ +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNK----GIRPNVVTYNSL 296
Query: 380 HRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGC 439
R L GR+ +A +++ M P+ +T+S +I K G+ +A + DEM +
Sbjct: 297 IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 356
Query: 440 IPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYK 499
PDI T++ LI G C + +D A F M+ K+ + + LI GF KRV +
Sbjct: 357 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGME 416
Query: 500 LLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQY---- 555
L EM ++ L T+ TLI+ L A + A + + M PP + Y
Sbjct: 417 LFREMSQR-GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPP---DIITYSILL 472
Query: 556 --ISKFGTVEDASEFLKALSVKEY-------PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+G +E KAL V EY P Y + E G+ + DL
Sbjct: 473 DGLCKYGKLE------KALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 135/314 (42%), Gaps = 34/314 (10%)
Query: 264 HNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKL 323
++ +YN ++ R + V+ +M K GYE DI T + + + + +AV L
Sbjct: 113 YDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVAL 172
Query: 324 FEFMMDGPYKPSV-----------------QDCSLLLRSISSINNPDLGLVFRVANKYES 366
+ M Y+P+ + +L+ R ++ PDL V N
Sbjct: 173 VDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCK 232
Query: 367 LGN-----SLSKS-----------VYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNIT 410
G+ SL K +Y I AL ++A + M N G P+ +T
Sbjct: 233 RGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVT 292
Query: 411 YSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMM 470
Y+ +I LC GR+ DA +L +M E P++ T++ LI ++ A + +M+
Sbjct: 293 YNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Query: 471 EKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRL 530
+++ D D LINGF R++ A + MI K P T+ TLI+ A+R+
Sbjct: 353 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISK-DCFPNVVTYNTLIKGFCKAKRV 411
Query: 531 EEAMNLLRLMKKQN 544
EE M L R M ++
Sbjct: 412 EEGMELFREMSQRG 425
Score = 88.6 bits (218), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 137/301 (45%), Gaps = 7/301 (2%)
Query: 306 KISRQFQKFRMMEDAVKLFEFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYE 365
K+SR ++DAV LF M+ PS+ + + LL +I+ +N DL V + + +
Sbjct: 50 KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDL--VISLGERMQ 107
Query: 366 SLGNSLSKSVYDGIHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFE 425
+L S Y+ + + + A ++ M G+EPD +T S ++ G C R
Sbjct: 108 NLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRIS 167
Query: 426 DACNVLDEMEENGCIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLI 485
+A ++D+M P+ T+ LI G N+ A+ +M+ + D ++
Sbjct: 168 EAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVV 227
Query: 486 NGFLSQKRVNGAYKLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNY 545
NG + ++ A LL +M EK ++ + T+I+ L + + +A+NL M +
Sbjct: 228 NGLCKRGDIDLALSLLKKM-EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGI 286
Query: 546 PPFPEPF---VQYISKFGTVEDASEFLK-ALSVKEYPSSAAYLQVFESFFNEGRHYEAKD 601
P + ++ + +G DAS L + K P+ + + ++F EG+ EA+
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 602 L 602
L
Sbjct: 347 L 347
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 106/237 (44%), Gaps = 9/237 (3%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +TYN +++ + + V + + EM + G + TY + + + + A K+F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKS---VYDGIHR 381
+ M+ P + S+LL + + LV +E L S + Y+ +
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVV-----FEYLQKSKMEPDIYTYNIMIE 508
Query: 382 ALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIP 441
+ K G+ ++ + ++ G +P+ I Y+ +I G C+ G E+A + EM+E+G +P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568
Query: 442 DIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
+ T+ LI+ + + +M + DA + ++IN L R+ +Y
Sbjct: 569 NSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN-MLHDGRLEKSY 624
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 151/340 (44%), Gaps = 11/340 (3%)
Query: 261 GYKHNTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDA 320
G HN TYN ++ R + ++ +M K GYE I T + + + + DA
Sbjct: 40 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 99
Query: 321 VKLFEFMMDGPYKPSVQDCSLLLRSISSINNPD--LGLVFRVANKYESLGNSLSKSVYDG 378
V L + M++ Y+P + L+ + N + LV R+ + G + Y
Sbjct: 100 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR----GCQPNLVTYGV 155
Query: 379 IHRALTKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENG 438
+ L K G D A ++ M+ A E D + ++ +I LCK +DA N+ EME G
Sbjct: 156 VVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 439 CIPDIKTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAY 498
P++ T++ LI C+ A + M+EK + + + LI+ F+ + + A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 499 KLLVEMIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYISK 558
KL +MI++ + P T+ +LI RL++A + M ++ P + + I
Sbjct: 276 KLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKG 334
Query: 559 FGT---VEDASEFLKALSVKEYPS-SAAYLQVFESFFNEG 594
F VED +E + +S + + Y + + F++G
Sbjct: 335 FCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 132/273 (48%), Gaps = 7/273 (2%)
Query: 334 PSVQDCSLLLRSISSINNPDLGLVFRVANKYESLGNSLSKSVYDGIHRALTKLGRFDEAE 393
PS+ + + LL +I+ + DL V + K + LG S + Y+ + + + A
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDL--VISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 394 KMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDIKTWTILIQGH 453
++ M G+EP +T S ++ G C R DA ++D+M E G PD T+T LI G
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 454 CAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVEMIEKVRLRPW 513
N+ A+ +M+++ + V++NG + ++ A+ LL +M E ++
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEAD 184
Query: 514 QATFKTLIEKLLGARRLEEAMNLLRLMKKQNYPPFPEPFVQYIS---KFGTVEDASEFLK 570
F T+I+ L R +++A+NL + M+ + P + IS +G DAS+ L
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 244
Query: 571 ALSVKEY-PSSAAYLQVFESFFNEGRHYEAKDL 602
+ K+ P+ + + ++F EG+ EA+ L
Sbjct: 245 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Score = 96.7 bits (239), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 5/278 (1%)
Query: 265 NTITYNGILRVLARHESVRDFWNVVEEMKKEGYEMDIDTYIKISRQFQKFRMMEDAVKLF 324
N +T+N ++ + + + ++M K + DI TY + F ++ A ++F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 325 EFMMDGPYKPSVQDCSLLLRSISSINNPDLGL-VFRVANKYESLGNSLSKSVYDGIHRAL 383
EFM+ P + + L++ + G +FR + +G++++ Y + + L
Sbjct: 314 EFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT---YTTLIQGL 370
Query: 384 TKLGRFDEAEKMMKAMKNAGFEPDNITYSQVIFGLCKAGRFEDACNVLDEMEENGCIPDI 443
G D A+K+ K M + G PD +TYS ++ GLC G+ E A V D M+++ DI
Sbjct: 371 FHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 430
Query: 444 KTWTILIQGHCAANEVDRALLCFAKMMEKNYDADADLLDVLINGFLSQKRVNGAYKLLVE 503
+T +I+G C A +VD F + K + + +I+G S++ + AY LL +
Sbjct: 431 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 490
Query: 504 MIEKVRLRPWQATFKTLIEKLLGARRLEEAMNLLRLMK 541
M E L P T+ TLI L + L+R M+
Sbjct: 491 MKEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,867,420
Number of Sequences: 539616
Number of extensions: 9185219
Number of successful extensions: 32110
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 274
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 26733
Number of HSP's gapped (non-prelim): 2294
length of query: 639
length of database: 191,569,459
effective HSP length: 124
effective length of query: 515
effective length of database: 124,657,075
effective search space: 64198393625
effective search space used: 64198393625
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)