BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037478
(148 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQG 141
+L F L + +++NFS LG+GGFG VYKG L DG +AVKRL + QG
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQG 77
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 69 MSASELEKTENDQIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE 128
+S+S L E+ ++ +DLE +TNNF +G G FG VYKG L DG +
Sbjct: 16 LSSSYLVPFESYRVPLVDLE----------EATNNFDHKFLIGHGVFGKVYKGVLRDGAK 65
Query: 129 IAVKRLSKISEQG 141
+A+KR + S QG
Sbjct: 66 VALKRRTPESSQG 78
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 10/73 (13%)
Query: 69 MSASELEKTENDQIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE 128
+S+S L E+ ++ +DLE +TNNF +G G FG VYKG L DG +
Sbjct: 16 LSSSYLVPFESYRVPLVDLE----------EATNNFDHKFLIGHGVFGKVYKGVLRDGAK 65
Query: 129 IAVKRLSKISEQG 141
+A+KR + S QG
Sbjct: 66 VALKRRTPESSQG 78
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 48.9 bits (115), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQG 141
+L F L + +++NF LG+GGFG VYKG L DG +AVKRL + QG
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQG 69
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 78 ENDQIQNIDLELPLFELATIVSSTNNF---SINM---KLGQGGFGPVYKGTLVDGQEIAV 131
EN ++ D F + + TNNF I++ K+G+GGFG VYKG V+ +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 132 KRLSKISEQGLKELKNE 148
K+L+ + + +ELK +
Sbjct: 60 KKLAAMVDITTEELKQQ 76
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 78 ENDQIQNIDLELPLFELATIVSSTNNF---SINM---KLGQGGFGPVYKGTLVDGQEIAV 131
EN ++ D F + + TNNF I++ K+G+GGFG VYKG V+ +AV
Sbjct: 1 ENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAV 59
Query: 132 KRLSKISEQGLKELKNE 148
K+L+ + + +ELK +
Sbjct: 60 KKLAAMVDITTEELKQQ 76
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 86 DLELPLFELATIVSSTNNF---SINM---KLGQGGFGPVYKGTLVDGQEIAVKRLSKISE 139
D F + + TNNF I++ K+G+GGFG VYKG V+ +AVK+L+ + +
Sbjct: 3 DTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVD 61
Query: 140 QGLKELKNE 148
+ELK +
Sbjct: 62 ITTEELKQQ 70
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 92 FELATIVSSTNNF---SINM---KLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKEL 145
F + + TNNF I++ K G+GGFG VYKG V+ +AVK+L+ + + +EL
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 146 KNE 148
K +
Sbjct: 65 KQQ 67
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 17/89 (19%)
Query: 57 YFQDGGQDLYIRMSASELEKTENDQIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFG 116
YFQ G ++I +SA E + +Q++ I S+ N +G+G FG
Sbjct: 57 YFQ-GANTVHIDLSALNPELVQ--AVQHV----------VIGPSSLIVHFNEVIGRGHFG 103
Query: 117 PVYKGTLV--DGQEI--AVKRLSKISEQG 141
VY GTL+ DG++I AVK L++I++ G
Sbjct: 104 CVYHGTLLDNDGKKIHCAVKSLNRITDIG 132
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 33.5 bits (75), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 69 MSASELEKTENDQIQNIDLEL-PLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLV--D 125
+S+ L+ T + + ++ EL + I S+ N +G+G FG VY GTL+ D
Sbjct: 14 ISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDND 73
Query: 126 GQEI--AVKRLSKISEQG 141
G++I AVK L++I++ G
Sbjct: 74 GKKIHCAVKSLNRITDIG 91
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 69 MSASELEKTENDQIQNIDLEL-PLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLV--D 125
+S+ L+ T + + ++ EL + I S+ N +G+G FG VY GTL+ D
Sbjct: 15 ISSPLLQNTVHIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDND 74
Query: 126 GQEI--AVKRLSKISEQG 141
G++I AVK L++I++ G
Sbjct: 75 GKKIHCAVKSLNRITDIG 92
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 33.1 bits (74), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 38 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 78
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 34 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 74
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 68
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 32 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 72
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 33 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 73
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 30 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 70
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 31 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 71
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 33.1 bits (74), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 4/41 (9%)
Query: 105 SINMKLGQGGFGPVYKGTLV--DGQEI--AVKRLSKISEQG 141
N +G+G FG VY GTL+ DG++I AVK L++I++ G
Sbjct: 25 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIG 65
>pdb|3LZ8|A Chain A, Structure Of A Putative Chaperone Dnaj From Klebsiella
Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
Resolution.
pdb|3LZ8|B Chain B, Structure Of A Putative Chaperone Dnaj From Klebsiella
Pneumoniae Subsp. Pneumoniae Mgh 78578 At 2.9 A
Resolution
Length = 329
Score = 32.7 bits (73), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 10/71 (14%)
Query: 62 GQDLYIRMSASELEKTENDQIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKG 121
G DL I + A LE+T +Q + I LP++ + ++ S ++N+K+ G
Sbjct: 140 GHDLEIEV-AVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG-------- 190
Query: 122 TLVDGQEIAVK 132
+VDGQ I +K
Sbjct: 191 -VVDGQRIRLK 200
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 103 NFSINMKLGQGGFGPVYKGT-LVDGQEIAVKRL 134
NF I K+G+G F VY+ L+DG +A+K++
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKV 65
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRL 134
E P L T+ + N ++G+GGFG V+KG LV D +A+K L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRL 134
E P L T+ + N ++G+GGFG V+KG LV D +A+K L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 31.6 bits (70), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRL 134
E P L T+ + N ++G+GGFG V+KG LV D +A+K L
Sbjct: 7 EFPKSRLPTL--ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSL 52
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 102 NNFSINMKLGQGGFGPVYKGT-LVDGQEIAVK 132
N + + K+G G FG +Y GT + G+E+A+K
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 38
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 102 NNFSINMKLGQGGFGPVYKGT-LVDGQEIAVK 132
N + + K+G G FG +Y GT + G+E+A+K
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIK 40
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 81 QIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVD-GQEIAVKRLSK 136
Q +N++L + L + N+FS++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 81 QIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVD-GQEIAVKRLSK 136
Q +N++L + L + N+FS++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 81 QIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVD-GQEIAVKRLSK 136
Q +N++L + L + N+FS++ +G+GGFG VY D G+ A+K L K
Sbjct: 175 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 223
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.2 bits (69), Expect = 0.23, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 9/57 (15%)
Query: 81 QIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVD-GQEIAVKRLSK 136
Q +N++L + L + N+FS++ +G+GGFG VY D G+ A+K L K
Sbjct: 176 QWKNVELNIHL--------TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 110 LGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 146
+G GGFG V+K +DG+ +KR+ +E+ +E+K
Sbjct: 19 IGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVK 56
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 83
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 69
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 83
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 23 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 69
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 82
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 55
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 83
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 82
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 82
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 50
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 30.4 bits (67), Expect = 0.40, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLVD-GQEIAVK 132
N F + K+G G FG +Y GT + +E+A+K
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIK 38
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 30.4 bits (67), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 37 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 83
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 55
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 54
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 70
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 70
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 24 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 70
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 50
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 8 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 54
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 50
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 97
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 51 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 97
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 36 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 82
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKN 147
+N + +G+G +G VYKG+L D + +AVK S + Q KN
Sbjct: 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKN 57
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 7 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 53
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 89
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 56 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 102
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 9 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 55
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 102 NNFSINMKLGQGGFGPVYKGTLV-DGQEIAVKRLSK--ISEQGLKELKN 147
+ + + LG GGFG VY G V D +A+K + K IS+ G EL N
Sbjct: 31 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWG--ELPN 77
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 110 LGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKELK 146
+G GGFG V+K +DG+ ++R+ +E+ +E+K
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAEREVK 57
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 103 NFSINMKLGQGGFGPVYKGT-LVDGQEIAVK 132
++ + ++G+G FG +++GT L++ Q++A+K
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 41
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 30.0 bits (66), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Query: 103 NFSINMKLGQGGFGPVYKGT-LVDGQEIAVK 132
++ + ++G+G FG +++GT L++ Q++A+K
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIK 40
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 102 NNFSINMKLGQGGFGPVYKGT-LVDGQEIAVK 132
N + + K+G G FG +Y G + G+E+A+K
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIK 40
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 29.3 bits (64), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 14 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 58
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 59
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 29.3 bits (64), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 14 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 59
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 28.9 bits (63), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 37 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 81
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 38 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 26 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 11 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 56
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 30 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 74
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 54
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%)
Query: 104 FSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
++ ++G G FG VYKG + + ++ + Q L+ KNE
Sbjct: 38 ITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 82
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 10/25 (40%), Positives = 18/25 (72%)
Query: 110 LGQGGFGPVYKGTLVDGQEIAVKRL 134
+G G FG V++ LV+ E+A+K++
Sbjct: 48 IGNGSFGVVFQAKLVESDEVAIKKV 72
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 109 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKEL 145
K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKEL 64
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 109 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKEL 145
K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKEL 64
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 109 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKEL 145
K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKEL 63
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 109 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKEL 145
K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKEL 63
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 109 KLGQGGFGPVYKGT-LVDGQEIAVKRLSKISEQGLKEL 145
K+GQG G VY + GQE+A+++++ + +Q KEL
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMN-LQQQPKKEL 63
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 12/63 (19%)
Query: 98 VSSTNNFSINMKLGQGGFGPVYKG-TLVDGQEIAVKRLSKISEQG-----------LKEL 145
+SS++ F KLG G + VYKG G +A+K + SE+G +KEL
Sbjct: 1 MSSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKEL 60
Query: 146 KNE 148
K+E
Sbjct: 61 KHE 63
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 4/34 (11%)
Query: 110 LGQGGFGPVYKGTLVDGQ----EIAVKRLSKISE 139
+G+G FG VY G +D + A+K LS+I+E
Sbjct: 29 IGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE 62
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 216
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 216
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 185 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 216
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 47
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 186 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 217
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 268 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 299
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 9 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 40
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 12 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 43
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 8 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 39
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 10 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 41
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 16 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 47
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|1XPG|A Chain A, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And
Methyltetrahydrofolate
pdb|1XPG|B Chain B, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And
Methyltetrahydrofolate
Length = 765
Score = 28.5 bits (62), Expect = 1.6, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 73 ELEKTENDQIQNIDLELPLFELATIVS 99
E E TE D+IQ L LPLF TI S
Sbjct: 417 EKEYTERDRIQRERLNLPLFPTTTIGS 443
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|1XDJ|A Chain A, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And Homocysteine
pdb|1XDJ|B Chain B, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And Homocysteine
Length = 766
Score = 28.5 bits (62), Expect = 1.6, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 73 ELEKTENDQIQNIDLELPLFELATIVS 99
E E TE D+IQ L LPLF TI S
Sbjct: 417 EKEYTERDRIQRERLNLPLFPTTTIGS 443
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|1T7L|A Chain A, Crystal Structure Of Cobalamin-Independent Methionine
Synthase From T. Maritima
pdb|1T7L|B Chain B, Crystal Structure Of Cobalamin-Independent Methionine
Synthase From T. Maritima
pdb|3BQ5|A Chain A, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And Homocysteine
(Monoclinic)
pdb|3BQ5|B Chain B, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ And Homocysteine
(Monoclinic)
pdb|3BQ6|A Chain A, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ (Monoclinic)
pdb|3BQ6|B Chain B, Crystal Structure Of T. Maritima Cobalamin-Independent
Methionine Synthase Complexed With Zn2+ (Monoclinic)
Length = 766
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 73 ELEKTENDQIQNIDLELPLFELATIVS 99
E E TE D+IQ L LPLF TI S
Sbjct: 417 EKEYTERDRIQRERLNLPLFPTTTIGS 443
>pdb|1XR2|A Chain A, Crystal Structure Of Oxidized T. Maritima Cobalamin-
Independent Methionine Synthase Complexed With
Methyltetrahydrofolate
pdb|1XR2|B Chain B, Crystal Structure Of Oxidized T. Maritima Cobalamin-
Independent Methionine Synthase Complexed With
Methyltetrahydrofolate
Length = 766
Score = 28.1 bits (61), Expect = 1.7, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 73 ELEKTENDQIQNIDLELPLFELATIVS 99
E E TE D+IQ L LPLF TI S
Sbjct: 417 EKEYTERDRIQRERLNLPLFPTTTIGS 443
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 104 FSINMKLGQGGFGPVYKGTLVD-GQEIAVKRLSKISEQGLKELKNE 148
F + KLG+G +G VYK + GQ +A+K++ E L+E+ E
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVP--VESDLQEIIKE 74
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 19/32 (59%)
Query: 103 NFSINMKLGQGGFGPVYKGTLVDGQEIAVKRL 134
+ + +KLGQG FG V+ GT +A+K L
Sbjct: 19 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTL 50
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 95 ATIVSSTNNFSINMKLGQGGFGPVYKGT-LVDGQEIAVKRL 134
A +S + + KLG+G +G VYK V + +A+KR+
Sbjct: 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRI 67
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 109 KLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE 144
+LG+ FG VYKG L Q +A+K L +E L+E
Sbjct: 33 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 74
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Query: 104 FSINMKLGQGGFGPVYKGT-LVDGQEIAVKRLSK 136
+ + LG+GGFG V+ G L D ++A+K + +
Sbjct: 33 YRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPR 66
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 109 KLGQGGFGPVYKGTLV------DGQEIAVKRLSKISEQGLKE 144
+LG+ FG VYKG L Q +A+K L +E L+E
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLRE 57
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 109 KLGQGGFGPVYKGTLVDGQEIAVKRL 134
K+G+G +G VYK G+ +A+KR+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI 53
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 109 KLGQGGFGPVYKGTLVDGQEIAVKRL 134
K+G+G +G VYK G+ +A+KR+
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRI 53
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 26.6 bits (57), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 109 KLGQGGFGPVYKGTLVD-GQEIAVKRL 134
K+GQG FG V+K GQ++A+K++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV 51
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Query: 110 LGQGGFGPVYKGTLV-DGQEIAVKRLSKI-----SEQGLKELKNE 148
LG G FG VYKG + DG+ + + K+ S + KE+ +E
Sbjct: 25 LGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDE 69
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 109 KLGQGGFGPVYKGTLVD-GQEIAVKRL 134
K+GQG FG V+K GQ++A+K++
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKV 50
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 26.2 bits (56), Expect = 6.6, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 110 LGQGGFGPVYKGTLVD-GQEIAVKRL 134
+G G FG VY+ L D G+ +A+K++
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKV 132
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 26.2 bits (56), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 92 FELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQEIAVKRLSKISEQGLKELKNE 148
+L+ + F + +G G +G VYKG V ++A ++ ++ +E+K E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQE 70
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 26.2 bits (56), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 109 KLGQGGFGPVYKGTLVD-GQEIAVKRL 134
K+GQG FG V+K GQ++A+K++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV 51
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 109 KLGQGGFGPVYKGTLVD-GQEIAVKRL 134
K+GQG FG V+K GQ++A+K++
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKV 51
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 12 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 70
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 71 NKEILDE 77
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 25.8 bits (55), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 63 NKEILDE 69
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 64 NKEILDE 70
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 25.8 bits (55), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 68 NKEILDE 74
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 25.8 bits (55), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 6 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 64
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 65 NKEILDE 71
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 64 NKEILDE 70
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 61 NKEILDE 67
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 63 NKEILDE 69
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 8 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 66
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 67 NKEILDE 73
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 25.8 bits (55), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 64 NKEILDE 70
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 25.8 bits (55), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 63 NKEILDE 69
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 73 ELEKTENDQIQNIDLELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE---- 128
++ TEN Q E P L I+ T I + LG G FG VYKG + E
Sbjct: 13 DIPTTENLYFQGSG-EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKI 70
Query: 129 -IAVKRLSK-ISEQGLKELKNE 148
+A+K L + S + KE+ +E
Sbjct: 71 PVAIKELREATSPKANKEILDE 92
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 25.8 bits (55), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 110 LGQGGFGPVYKGTLVD-GQEIAVKRL 134
+G G FG VY+ L D G+ +A+K++
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKV 81
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 100 STNNFSINMKLGQGGFGPVYKG-TLVDGQEIAVKRL 134
S NF K+G+G +G VYK + G+ +A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 63 NKEILDE 69
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 110 LGQGGFGPVYKGTLVD-GQEIAVKRL 134
+G G FG VY+ L D G+ +A+K++
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKV 87
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 25.8 bits (55), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 5 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 63
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 64 NKEILDE 70
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 9 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 67
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 68 NKEILDE 74
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 25.8 bits (55), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 2 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 60
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 61 NKEILDE 67
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 4 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 62
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 63 NKEILDE 69
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 100 STNNFSINMKLGQGGFGPVYKG-TLVDGQEIAVKRL 134
S NF K+G+G +G VYK + G+ +A+K++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKI 36
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 25.8 bits (55), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 88 ELPLFELATIVSSTNNFSINMKLGQGGFGPVYKGTLVDGQE-----IAVKRLSK-ISEQG 141
E P L I+ T I + LG G FG VYKG + E +A+K L + S +
Sbjct: 3 EAPNQALLRILKETEFKKIKV-LGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKA 61
Query: 142 LKELKNE 148
KE+ +E
Sbjct: 62 NKEILDE 68
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,398,426
Number of Sequences: 62578
Number of extensions: 172880
Number of successful extensions: 648
Number of sequences better than 100.0: 211
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 572
Number of HSP's gapped (non-prelim): 211
length of query: 148
length of database: 14,973,337
effective HSP length: 90
effective length of query: 58
effective length of database: 9,341,317
effective search space: 541796386
effective search space used: 541796386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.7 bits)