Query 037485
Match_columns 358
No_of_seqs 116 out of 427
Neff 6.1
Searched_HMMs 13730
Date Mon Mar 25 22:08:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037485.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037485hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wpga4 f.33.1.1 (A:1-124,A:24 11.0 2.5E+02 0.018 25.0 7.4 47 100-146 406-461 (472)
2 d1rutx3 g.39.1.3 (X:83-113) LI 6.7 59 0.0043 18.9 0.4 15 4-18 1-15 (31)
3 d1vjja4 d.3.1.4 (A:141-461) Tr 5.9 41 0.003 29.9 -1.0 11 153-163 189-199 (321)
4 d1g0da4 d.3.1.4 (A:141-461) Tr 5.9 41 0.003 29.8 -1.0 11 153-163 191-201 (321)
5 d1ex0a4 d.3.1.4 (A:191-510) Tr 5.8 42 0.0031 29.8 -1.0 11 153-163 182-192 (320)
6 d1kqfb2 f.23.22.1 (B:246-290) 5.4 2.6E+02 0.019 17.3 3.1 22 269-290 14-35 (45)
7 g2bi6.2 g.3.12.1 (L:,H:1-7,H:3 4.9 1.1E+02 0.0077 16.9 0.7 10 7-16 2-11 (28)
8 d1ffta_ f.24.1.1 (A:) Cytochro 4.6 4.7E+02 0.034 23.7 5.9 35 123-157 436-470 (501)
9 d2gnoa1 a.80.1.1 (A:209-306) g 4.6 1.7E+02 0.013 20.4 1.9 28 123-150 21-50 (98)
10 d2q3za4 d.3.1.4 (A:146-461) Tr 4.5 49 0.0036 29.3 -1.4 11 153-163 189-199 (316)
No 1
>d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=11.02 E-value=2.5e+02 Score=24.98 Aligned_cols=47 Identities=6% Similarity=0.136 Sum_probs=24.8
Q ss_pred hcccchhHHHHHHHHHhhheeeccc--hhhH-------HHHHHHHHHHHHHHHHHH
Q 037485 100 WHSGYWILKSFLLIASMAVPFFLPS--DYMQ-------IYGELARVGAGIFLLLQL 146 (358)
Q Consensus 100 ihnG~W~~K~l~~~~l~i~~FfIP~--~f~~-------~y~~i~~~gs~~FiliQl 146 (358)
++|-+|..=+++-+++.+...++|. .+|+ .|.....++...+++.|+
T Consensus 406 ~~N~~l~~av~i~~~l~~~i~yiP~l~~vf~~~pL~~~~w~i~l~~~~~~~~~~El 461 (472)
T d1wpga4 406 WVNIWLLGSICLSMSLHFLILYVDPLPMIFKLKALDLTQWLMVLKISLPVIGLDEI 461 (472)
T ss_dssp GGCHHHHHHHHHHHHHHHHHHHSTTTHHHHTCCCCCHHHHHHHHHHHTHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3555555555555555666677885 2322 344444444445555554
No 2
>d1rutx3 g.39.1.3 (X:83-113) LIM only 4 (Lmo4) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=6.71 E-value=59 Score=18.94 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=11.5
Q ss_pred CcccccccccccCcc
Q 037485 4 SAGAIEDCSAEKKRS 18 (358)
Q Consensus 4 ~~~~~~~~~~~~~~s 18 (358)
+.|+|..|...+.++
T Consensus 1 ~~g~Ca~C~~~I~~~ 15 (31)
T d1rutx3 1 NSGACSACGQSIPAS 15 (31)
T ss_dssp CCEECTTTCCEECTT
T ss_pred CCcccccccCcCChh
Confidence 368888888887765
No 3
>d1vjja4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Human (Homo sapiens), TGase E3 [TaxId: 9606]}
Probab=5.94 E-value=41 Score=29.89 Aligned_cols=11 Identities=27% Similarity=0.652 Sum_probs=9.8
Q ss_pred HHHhhhccccC
Q 037485 153 IVWWNKYWTPD 163 (358)
Q Consensus 153 a~~wne~w~~~ 163 (358)
.|-|||.|+.|
T Consensus 189 FHvWnE~WM~R 199 (321)
T d1vjja4 189 FHVWNEGWFVR 199 (321)
T ss_dssp EEEEEEEEECC
T ss_pred eeccceeeecc
Confidence 38899999998
No 4
>d1g0da4 d.3.1.4 (A:141-461) Transglutaminase catalytic domain {Red sea bream (Chrysophrys major) [TaxId: 143350]}
Probab=5.86 E-value=41 Score=29.84 Aligned_cols=11 Identities=18% Similarity=0.697 Sum_probs=9.9
Q ss_pred HHHhhhccccC
Q 037485 153 IVWWNKYWTPD 163 (358)
Q Consensus 153 a~~wne~w~~~ 163 (358)
.|-|||.|+.|
T Consensus 191 fHvWnE~WM~R 201 (321)
T d1g0da4 191 FHCWVESWMSR 201 (321)
T ss_dssp EEEEEEEEECC
T ss_pred ecccceeeeec
Confidence 48999999998
No 5
>d1ex0a4 d.3.1.4 (A:191-510) Transglutaminase catalytic domain {Human (Homo sapiens), blood isozyme [TaxId: 9606]}
Probab=5.80 E-value=42 Score=29.79 Aligned_cols=11 Identities=27% Similarity=0.809 Sum_probs=10.0
Q ss_pred HHHhhhccccC
Q 037485 153 IVWWNKYWTPD 163 (358)
Q Consensus 153 a~~wne~w~~~ 163 (358)
.|-|||.|+.|
T Consensus 182 FHvWnE~WM~R 192 (320)
T d1ex0a4 182 YHCWNEAWMTR 192 (320)
T ss_dssp EEEEEEEEECC
T ss_pred eeeceeeeecc
Confidence 48999999998
No 6
>d1kqfb2 f.23.22.1 (B:246-290) Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor {Escherichia coli [TaxId: 562]}
Probab=5.36 E-value=2.6e+02 Score=17.27 Aligned_cols=22 Identities=9% Similarity=0.237 Sum_probs=13.5
Q ss_pred hHHHHHHHHHHHHHHhhccccc
Q 037485 269 WTTILSFLIAIGTIVMSTFSTG 290 (358)
Q Consensus 269 ~~~iig~~~~~~~v~ys~~~a~ 290 (358)
....+|+..+++..++.=++-+
T Consensus 14 pl~~~~~~~~~~~~~fHYv~vG 35 (45)
T d1kqfb2 14 PLAAAGFIATFAGLIFHYIGIG 35 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhheeC
Confidence 3455777777776666555554
No 7
>g2bi6.2 g.3.12.1 (L:,H:1-7,H:32-41) Bromelain inhibitor VI (cysteine protease inhibitor) {Pineapple (Ananas comosus) [TaxId: 4615]}
Probab=4.89 E-value=1.1e+02 Score=16.85 Aligned_cols=10 Identities=20% Similarity=0.511 Sum_probs=5.2
Q ss_pred cccccccccC
Q 037485 7 AIEDCSAEKK 16 (358)
Q Consensus 7 ~~~~~~~~~~ 16 (358)
+|+.|+.|.+
T Consensus 2 acsecvcplr 11 (28)
T g2bi6.2 2 ACSECVCPLR 11 (28)
T ss_dssp CCSCEECCCC
T ss_pred ccccccccch
Confidence 4555555544
No 8
>d1ffta_ f.24.1.1 (A:) Cytochrome O ubiquinol oxidase, subunit I {Escherichia coli [TaxId: 562]}
Probab=4.63 E-value=4.7e+02 Score=23.66 Aligned_cols=35 Identities=23% Similarity=0.109 Sum_probs=29.0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 037485 123 PSDYMQIYGELARVGAGIFLLLQLVSVIEFIVWWN 157 (358)
Q Consensus 123 P~~f~~~y~~i~~~gs~~FiliQlIlLvDFa~~wn 157 (358)
||.-+..|..++-+|+.+..+-+++.++++..++-
T Consensus 436 ~~~~~~~~~~~~~~g~~i~~~~~~~f~~~~~~s~~ 470 (501)
T d1ffta_ 436 IDPQFHTMLMIAASGAVLIALGILCLVIQMYVSIR 470 (501)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445678889999999999999999999988874
No 9
>d2gnoa1 a.80.1.1 (A:209-306) gamma subunit {Thermotoga maritima [TaxId: 2336]}
Probab=4.57 E-value=1.7e+02 Score=20.37 Aligned_cols=28 Identities=21% Similarity=0.578 Sum_probs=19.2
Q ss_pred cchhhHHHHHHH--HHHHHHHHHHHHHHHH
Q 037485 123 PSDYMQIYGELA--RVGAGIFLLLQLVSVI 150 (358)
Q Consensus 123 P~~f~~~y~~i~--~~gs~~FiliQlIlLv 150 (358)
|.+||..+-++. .-|--.|++||-+.=|
T Consensus 21 ~k~ff~lfdqv~ntitg~daflliq~~~ri 50 (98)
T d2gnoa1 21 SKEFFALFDQVTNTITGKDAFLLIQRLTRI 50 (98)
T ss_dssp GGGHHHHHHHHHHHSCTHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHhhcccchHHHHHHHHHHH
Confidence 667888887754 3455589999975433
No 10
>d2q3za4 d.3.1.4 (A:146-461) Transglutaminase catalytic domain {Human (Homo sapiens), tissue isozyme [TaxId: 9606]}
Probab=4.55 E-value=49 Score=29.28 Aligned_cols=11 Identities=18% Similarity=0.688 Sum_probs=10.3
Q ss_pred HHHhhhccccC
Q 037485 153 IVWWNKYWTPD 163 (358)
Q Consensus 153 a~~wne~w~~~ 163 (358)
+|.|||.|+.+
T Consensus 189 ~H~W~E~wm~r 199 (316)
T d2q3za4 189 FHCWVESWMTR 199 (316)
T ss_dssp EEEEEEEEECC
T ss_pred eeeeeeeeecc
Confidence 79999999987
Done!