BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037488
(628 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 107/421 (25%), Positives = 154/421 (36%), Gaps = 74/421 (17%)
Query: 1 MAFSFNKLVGVVPTTIFNVSTXXXXXXXXXXXXXXXXXXXWGNNFSGTIPSFIFNASKLS 60
+ SFN L G +P+++ ++S W N G IP + L
Sbjct: 420 LHLSFNYLSGTIPSSLGSLSKLRDLKL-------------WLNMLEGEIPQELMYVKTLE 466
Query: 61 RLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNN 120
L L N G IP S LSNC L + S SNN
Sbjct: 467 TLILDFNDLTGEIP-----------------------------SGLSNCTNLNWISLSNN 497
Query: 121 SLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIAXX 180
L G +P+ IG L +++ I + + + SG IP E+ + +LI + L N NG+IP A
Sbjct: 498 RLTGEIPKWIGRL-ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Query: 181 XXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGS 240
I +D + GNL + + S
Sbjct: 557 KQSGKIAANFIAGKRYVYIKNDGMKKEC----------------HGAGNLLEFQGIR--S 598
Query: 241 NQITSIPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGY 300
Q+ + + +S + G N ++ +D+S N SG IP IG
Sbjct: 599 EQLNRLST-------RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 651
Query: 301 LKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXXXXPISLEKLLDLKDINVSFN 360
+ L L L +N + GSIPD +GD P ++ L L +I++S N
Sbjct: 652 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 711
Query: 361 KLEGEIPREGSFRNFLAESFKGNELLCGMPNLQVPPCRTRIH-HTSRKNGLLIGIRRLTY 419
L G IP G F F F N LCG P + P + H R +G RRL
Sbjct: 712 NLSGPIPEMGQFETFPPAKFLNNPGLCGYPLPRCDPSNADGYAHHQRSHG-----RRLEN 766
Query: 420 L 420
L
Sbjct: 767 L 767
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 43 NNFSGTIPSFIFNA-SKLSRLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLN 101
N F+G IP F+ A L+ L+L N FYG +P F N + P
Sbjct: 276 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP--- 332
Query: 102 FLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI-PEEISNLTN 160
+ +L + LK S N G LP ++ NLS S+ + S N SG I P N N
Sbjct: 333 -MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 391
Query: 161 -LIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKL 219
L +YL N G IP +IP L L+ L L L N L
Sbjct: 392 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 451
Query: 220 SGFVPASFGNLTNLRSLHLGSNQITS-IPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNLK 278
G +P + L +L L N +T IPS S+N TG +P IG L+
Sbjct: 452 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 511
Query: 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSI 322
L + LS N+FSG IP +G + L +L L N G+IP ++
Sbjct: 512 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 555
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Query: 42 GNNFSGTIPSFIFNASKLSRLELQMNSFYGFIP-NTFXXXXXXXXXXXXDNYLTSSTPKL 100
GN+F G +P F + S L L L N+F G +P +T N + P+
Sbjct: 300 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE- 358
Query: 101 NFLSSLSN-CKYLKYFSFSNNSLDG-ILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNL 158
SL+N L S+N+ G ILP N +++ ++ + +G IP +SN
Sbjct: 359 ----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 414
Query: 159 TNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNK 218
+ L++++L N L+G+IP + IP +L + L L L N
Sbjct: 415 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 474
Query: 219 LSGFVPASFGNLTNLRSLHLGSNQITS-IPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNL 277
L+G +P+ N TNL + L +N++T IP S+N F+G +P E+G+
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 278 KVLIKIDLSMNNFSGVIPITI 298
+ LI +DL+ N F+G IP +
Sbjct: 535 RSLIWLDLNTNLFNGTIPAAM 555
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 145/366 (39%), Gaps = 41/366 (11%)
Query: 43 NNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLNF 102
NNFS IP F+ + S L L++ N G +F
Sbjct: 207 NNFSTGIP-FLGDCSALQHLDISGNKLSG-----------------------------DF 236
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN-L 161
++S C LK + S+N G +P +S++ + +G IP+ +S + L
Sbjct: 237 SRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDTL 293
Query: 162 IAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIP-DDLCRLAALFQLDLGSNKLS 220
+ L GN G++P +P D L ++ L LDL N+ S
Sbjct: 294 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 353
Query: 221 GFVPASFGNLT-NLRSLHLGSNQITS--IPS-TXXXXXXXXXXXXSSNFFTGPLPLEIGN 276
G +P S NL+ +L +L L SN + +P+ +N FTG +P + N
Sbjct: 354 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 413
Query: 277 LKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXX 336
L+ + LS N SG IP ++G L L+ L L N L+G IP +
Sbjct: 414 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 473
Query: 337 XXXXXXPISLEKLLDLKDINVSFNKLEGEIPRE-GSFRNFLAESFKGNELLCGMPNLQVP 395
P L +L I++S N+L GEIP+ G N N +P ++
Sbjct: 474 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP-AELG 532
Query: 396 PCRTRI 401
CR+ I
Sbjct: 533 DCRSLI 538
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGG--IPEEISN-LT 159
L+SL +C LK+ + S+N+LD + G S+E+ + + +ISG + +S+
Sbjct: 116 LTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 175
Query: 160 NLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKL 219
L + + GNK++G + ++ D +AL LD+ NKL
Sbjct: 176 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGD---CSALQHLDISGNKL 232
Query: 220 SGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLP-LEIGNLK 278
SG + T L+ L++ SNQ P + N FTG +P G
Sbjct: 233 SGDFSRAISTCTELKLLNISSNQFVG-PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACD 291
Query: 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXX 338
L +DLS N+F G +P G L+ L L N G +P
Sbjct: 292 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD----------------- 334
Query: 339 XXXXPISLEKLLDLKDINVSFNKLEGEIPR 368
+L K+ LK +++SFN+ GE+P
Sbjct: 335 ------TLLKMRGLKVLDLSFNEFSGELPE 358
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 89/284 (31%), Positives = 120/284 (42%), Gaps = 8/284 (2%)
Query: 43 NNFSGTIPSFIFNA-SKLSRLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLN 101
N F+G IP F+ A L+ L+L N FYG +P F N + P
Sbjct: 279 NKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELP--- 335
Query: 102 FLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI-PEEISNLTN 160
+ +L + LK S N G LP ++ NLS S+ + S N SG I P N N
Sbjct: 336 -MDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKN 394
Query: 161 -LIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKL 219
L +YL N G IP +IP L L+ L L L N L
Sbjct: 395 TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNML 454
Query: 220 SGFVPASFGNLTNLRSLHLGSNQITS-IPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNLK 278
G +P + L +L L N +T IPS S+N TG +P IG L+
Sbjct: 455 EGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLE 514
Query: 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSI 322
L + LS N+FSG IP +G + L +L L N G+IP ++
Sbjct: 515 NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAM 558
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 146/397 (36%), Gaps = 71/397 (17%)
Query: 1 MAFSFNKLVGVVPTTIFNVSTXXXXXXXXXXXXXXXXXXXWGNNFSGTIPSFIFNASKLS 60
+ SFN L G +P+++ ++S W N G IP + L
Sbjct: 423 LHLSFNYLSGTIPSSLGSLSKLRDLKL-------------WLNMLEGEIPQELMYVKTLE 469
Query: 61 RLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNN 120
L L N G IP S LSNC L + S SNN
Sbjct: 470 TLILDFNDLTGEIP-----------------------------SGLSNCTNLNWISLSNN 500
Query: 121 SLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIAXX 180
L G +P+ IG L +++ I + + + SG IP E+ + +LI + L N NG+IP A
Sbjct: 501 RLTGEIPKWIGRL-ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Query: 181 XXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGS 240
I +D + GNL + + S
Sbjct: 560 KQSGKIAANFIAGKRYVYIKNDGMKKEC----------------HGAGNLLEFQGIR--S 601
Query: 241 NQITSIPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGY 300
Q+ + + +S + G N ++ +D+S N SG IP IG
Sbjct: 602 EQLNRLST-------RNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGS 654
Query: 301 LKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXXXXXXPISLEKLLDLKDINVSFN 360
+ L L L +N + GSIPD +GD P ++ L L +I++S N
Sbjct: 655 MPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNN 714
Query: 361 KLEGEIPREGSFRNFLAESFKGNELLCGMPNLQVPPC 397
L G IP G F F F N LCG P +P C
Sbjct: 715 NLSGPIPEMGQFETFPPAKFLNNPGLCGYP---LPRC 748
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 121/261 (46%), Gaps = 9/261 (3%)
Query: 42 GNNFSGTIPSFIFNASKLSRLELQMNSFYGFIP-NTFXXXXXXXXXXXXDNYLTSSTPKL 100
GN+F G +P F + S L L L N+F G +P +T N + P+
Sbjct: 303 GNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPE- 361
Query: 101 NFLSSLSN-CKYLKYFSFSNNSLDG-ILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNL 158
SL+N L S+N+ G ILP N +++ ++ + +G IP +SN
Sbjct: 362 ----SLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC 417
Query: 159 TNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNK 218
+ L++++L N L+G+IP + IP +L + L L L N
Sbjct: 418 SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477
Query: 219 LSGFVPASFGNLTNLRSLHLGSNQITS-IPSTXXXXXXXXXXXXSSNFFTGPLPLEIGNL 277
L+G +P+ N TNL + L +N++T IP S+N F+G +P E+G+
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 278 KVLIKIDLSMNNFSGVIPITI 298
+ LI +DL+ N F+G IP +
Sbjct: 538 RSLIWLDLNTNLFNGTIPAAM 558
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 145/366 (39%), Gaps = 41/366 (11%)
Query: 43 NNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFXXXXXXXXXXXXDNYLTSSTPKLNF 102
NNFS IP F+ + S L L++ N G +F
Sbjct: 210 NNFSTGIP-FLGDCSALQHLDISGNKLSG-----------------------------DF 239
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN-L 161
++S C LK + S+N G +P +S++ + +G IP+ +S + L
Sbjct: 240 SRAISTCTELKLLNISSNQFVGPIPPLP---LKSLQYLSLAENKFTGEIPDFLSGACDTL 296
Query: 162 IAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIP-DDLCRLAALFQLDLGSNKLS 220
+ L GN G++P +P D L ++ L LDL N+ S
Sbjct: 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFS 356
Query: 221 GFVPASFGNLT-NLRSLHLGSNQITS--IPS-TXXXXXXXXXXXXSSNFFTGPLPLEIGN 276
G +P S NL+ +L +L L SN + +P+ +N FTG +P + N
Sbjct: 357 GELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSN 416
Query: 277 LKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXX 336
L+ + LS N SG IP ++G L L+ L L N L+G IP +
Sbjct: 417 CSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFN 476
Query: 337 XXXXXXPISLEKLLDLKDINVSFNKLEGEIPRE-GSFRNFLAESFKGNELLCGMPNLQVP 395
P L +L I++S N+L GEIP+ G N N +P ++
Sbjct: 477 DLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIP-AELG 535
Query: 396 PCRTRI 401
CR+ I
Sbjct: 536 DCRSLI 541
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 112/270 (41%), Gaps = 31/270 (11%)
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGG--IPEEISN-LT 159
L+SL +C LK+ + S+N+LD + G S+E+ + + +ISG + +S+
Sbjct: 119 LTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCG 178
Query: 160 NLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKL 219
L + + GNK++G + ++ D +AL LD+ NKL
Sbjct: 179 ELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGD---CSALQHLDISGNKL 235
Query: 220 SGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLP-LEIGNLK 278
SG + T L+ L++ SNQ P + N FTG +P G
Sbjct: 236 SGDFSRAISTCTELKLLNISSNQFVG-PIPPLPLKSLQYLSLAENKFTGEIPDFLSGACD 294
Query: 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXXXXXXXXX 338
L +DLS N+F G +P G L+ L L N G +P
Sbjct: 295 TLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMD----------------- 337
Query: 339 XXXXPISLEKLLDLKDINVSFNKLEGEIPR 368
+L K+ LK +++SFN+ GE+P
Sbjct: 338 ------TLLKMRGLKVLDLSFNEFSGELPE 361
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 107/250 (42%), Gaps = 8/250 (3%)
Query: 151 IPEEISNLTNLIAIYLGG-NKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAAL 209
IP ++NL L +Y+GG N L G IP A +IPD L ++ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-SIP-STXXXXXXXXXXXXSSNFFT 267
LD N LSG +P S +L NL + N+I+ +IP S S N T
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 268 GPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXX 327
G +P NL L +DLS N G + G K+ Q + L N L + +G
Sbjct: 188 GKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKN 245
Query: 328 XXXXXXXXXXXXXXXPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELLC 387
P L +L L +NVSFN L GEIP+ G+ + F ++ N+ LC
Sbjct: 246 LNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLC 305
Query: 388 GMPNLQVPPC 397
G P +P C
Sbjct: 306 GSP---LPAC 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 86/218 (39%), Gaps = 28/218 (12%)
Query: 104 SSLSNCKYLKYFSFSN-NSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPE--------- 153
SSL+N YL + N+L G +P AI L+Q ++ H+ N+SG IP+
Sbjct: 70 SSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT-NVSGAIPDFLSQIKTLV 128
Query: 154 ---------------EISNLTNLIAIYLGGNKLNGSIPIAXXX-XXXXXXXXXXXXXXXX 197
IS+L NL+ I GN+++G+IP +
Sbjct: 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTG 188
Query: 198 SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXX 257
IP L F +DL N L G FG+ N + +HL N +
Sbjct: 189 KIPPTFANLNLAF-VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLN 247
Query: 258 XXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIP 295
+N G LP + LK L +++S NN G IP
Sbjct: 248 GLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 474 CDMMKHIRHRNLIKIISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLATIGYMAPEY 530
CD I HR+ +K + +++F+A DFG+AK + +D + TIG++APEY
Sbjct: 159 CD--PKIIHRD-VKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGTIGHIAPEY 214
Query: 531 GREGRVSTNGDVYSFGIMLIETFTRKKPTDEIF---SGEMTLKHWVNDLLPISVMK-VVD 586
G+ S DV+ +G+ML+E T ++ D ++ L WV LL ++ +VD
Sbjct: 215 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 274
Query: 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
L K + V + +A+ CT SP ER E+
Sbjct: 275 VDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEV 310
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 414 IRRLTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFK-NFDI 472
++R + EL A++ FS N++ RGG G VYK R+ G VAVK + + + F
Sbjct: 25 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQT 84
Query: 473 ECDMMKHIRHRNLIKIISSC 492
E +M+ HRNL+++ C
Sbjct: 85 EVEMISMAVHRNLLRLRGFC 104
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 474 CDMMKHIRHRNLIKIISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLATIGYMAPEY 530
CD I HR+ +K + +++F+A DFG+AK + +D + IG++APEY
Sbjct: 151 CD--PKIIHRD-VKAANILLDEEFEAVVGDFGLAKLMDYKDXH-VXXAVRGXIGHIAPEY 206
Query: 531 GREGRVSTNGDVYSFGIMLIETFTRKKPTDEIF---SGEMTLKHWVNDLLPISVMK-VVD 586
G+ S DV+ +G+ML+E T ++ D ++ L WV LL ++ +VD
Sbjct: 207 LSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVD 266
Query: 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
L K + V + +A+ CT SP ER E+
Sbjct: 267 VDLQGN------YKDEEVEQLIQVALLCTQSSPMERPKMSEV 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 414 IRRLTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFK-NFDI 472
++R + EL A++ F N++ RGG G VYK R+ G VAVK + + + F
Sbjct: 17 LKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQT 76
Query: 473 ECDMMKHIRHRNLIKIISSC 492
E +M+ HRNL+++ C
Sbjct: 77 EVEMISMAVHRNLLRLRGFC 96
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Query: 478 KHIRHRNLIKIISSCSNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG 534
+ I HR+ +K I+ +++F DFG++K + DQ+ + T+GY+ PEY +G
Sbjct: 158 RAIIHRD-VKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT-LKHW-VNDLLPISVMKVVDAHLLSQ 592
R++ DVYSFG++L E + + EM L W V + ++VD +L +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
I+ + + + A+KC S E+R
Sbjct: 277 ------IRPESLRKFGDTAVKCLALSSEDR 300
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 416 RLTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECD 475
R+ ++L +ATN F LI G G VYK + G +VA+K + + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 476 MMKHIRHRNLIKIISSCSNDD-------FKADFGMAKPLLKED---QSLIQTQTLA-TIG 524
+ RH +L+ +I C + + + + + L D S+ Q L IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
+ R + DV S I+L E F K
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPK 179
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 478 KHIRHRNLIKIISSCSNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG 534
+ I HR+ +K I+ +++F DFG++K + Q+ + T+GY+ PEY +G
Sbjct: 158 RAIIHRD-VKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKG 216
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT-LKHW-VNDLLPISVMKVVDAHLLSQ 592
R++ DVYSFG++L E + + EM L W V + ++VD +L +
Sbjct: 217 RLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADK 276
Query: 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
I+ + + + A+KC S E+R
Sbjct: 277 ------IRPESLRKFGDTAVKCLALSSEDR 300
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 65/152 (42%), Gaps = 11/152 (7%)
Query: 416 RLTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECD 475
R+ ++L +ATN F LI G G VYK + G +VA+K + + + F+ E +
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 476 MMKHIRHRNLIKIISSCSNDD-------FKADFGMAKPLLKED---QSLIQTQTLA-TIG 524
+ RH +L+ +I C + + + + + L D S+ Q L IG
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
+ R + DV S I+L E F K
Sbjct: 148 AARGLHYLHTRAIIHRDVKSINILLDENFVPK 179
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 5/164 (3%)
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPL 270
+LDL SNKLS +F LT LR L+L N++ ++P+ ++ L
Sbjct: 41 KLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQAL 100
Query: 271 PLEI-GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXX 329
P+ + L L ++ L N + P L L YL L YN LQ S+P + D
Sbjct: 101 PIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSL 159
Query: 330 XXXXXXXXXXXXXPI-SLEKLLDLKDINVSFNKLEGEIPREGSF 372
P + +KL +LK + + N+L+ +P EG+F
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVP-EGAF 201
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 3/137 (2%)
Query: 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKL 171
L+ ++N L LP I +++E W+ + L NL + L N+L
Sbjct: 63 LRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQL 121
Query: 172 NGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDL-CRLAALFQLDLGSNKLSGFVPASFGNL 230
S+P S+P + +L +L +L L +N+L +F L
Sbjct: 122 K-SLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKL 180
Query: 231 TNLRSLHLGSNQITSIP 247
T L++L L +NQ+ +P
Sbjct: 181 TELKTLKLDNNQLKRVP 197
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 158 LTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIP----DDLCRLAALFQLD 213
LT L +YL NKL ++P ++P D L LA +L
Sbjct: 60 LTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLA---ELR 115
Query: 214 LGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
L N+L P F +LT L L LG N++ S+P
Sbjct: 116 LDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLP 149
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 9/139 (6%)
Query: 113 KYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNIS---GGIPEEISNLTNLIAIYLGGN 169
K +N L + +A L++ + + +++ + GI +E+ NL L ++ N
Sbjct: 40 KKLDLQSNKLSSLPSKAFHRLTK-LRLLYLNDNKLQTLPAGIFKELKNLETL---WVTDN 95
Query: 170 KLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDL-CRLAALFQLDLGSNKLSGFVPASFG 228
KL ++PI S+P + L L L LG N+L F
Sbjct: 96 KLQ-ALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFD 154
Query: 229 NLTNLRSLHLGSNQITSIP 247
LT+L+ L L +NQ+ +P
Sbjct: 155 KLTSLKELRLYNNQLKRVP 173
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 5/86 (5%)
Query: 479 HIRHRNLIKIISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR 535
H HR+ IK + ++ F A DFG+A+ K Q+++ ++ + T YMAPE R G
Sbjct: 153 HHIHRD-IKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALR-GE 210
Query: 536 VSTNGDVYSFGIMLIETFTRKKPTDE 561
++ D+YSFG++L+E T DE
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAVDE 236
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 418 TYLELFQATNGFSEN------NLIDRGGIGYVYKRRIHYGMEVAVK----VFDLQYREAF 467
++ EL TN F E N + GG G VYK ++ VAVK + D+ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELK 74
Query: 468 KNFDIECDMMKHIRHRNLIKIISSCSNDD 496
+ FD E +M +H NL++++ S+ D
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGD 103
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Query: 479 HIRHRNLIKIISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR 535
H HR+ IK + ++ F A DFG+A+ K Q+++ + + T YMAPE R G
Sbjct: 153 HHIHRD-IKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALR-GE 210
Query: 536 VSTNGDVYSFGIMLIETFTRKKPTDE 561
++ D+YSFG++L+E T DE
Sbjct: 211 ITPKSDIYSFGVVLLEIITGLPAVDE 236
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 418 TYLELFQATNGFSEN------NLIDRGGIGYVYKRRIHYGMEVAVK----VFDLQYREAF 467
++ EL TN F E N + GG G VYK ++ VAVK + D+ E
Sbjct: 16 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELK 74
Query: 468 KNFDIECDMMKHIRHRNLIKIISSCSNDD 496
+ FD E +M +H NL++++ S+ D
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGD 103
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 11/109 (10%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQT-LATIGYMAPEYGREGRV 536
I HR++ I+ S +N DFG+A+ + S+ QT + T Y++PE R V
Sbjct: 137 IIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSV 196
Query: 537 STNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 197 DARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 5/86 (5%)
Query: 479 HIRHRNLIKIISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR 535
H HR+ IK + ++ F A DFG+A+ K Q ++ + + T YMAPE R G
Sbjct: 147 HHIHRD-IKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALR-GE 204
Query: 536 VSTNGDVYSFGIMLIETFTRKKPTDE 561
++ D+YSFG++L+E T DE
Sbjct: 205 ITPKSDIYSFGVVLLEIITGLPAVDE 230
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 418 TYLELFQATNGFSEN------NLIDRGGIGYVYKRRIHYGMEVAVK----VFDLQYREAF 467
++ EL TN F E N + GG G VYK ++ VAVK + D+ E
Sbjct: 10 SFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELK 68
Query: 468 KNFDIECDMMKHIRHRNLIKIISSCSNDD 496
+ FD E +M +H NL++++ S+ D
Sbjct: 69 QQFDQEIKVMAKCQHENLVELLGFSSDGD 97
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIG---YMAPEYGREG 534
I HR++ I+ S +N DFG+A+ + S+ TQT A IG Y++PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV--TQTAAVIGTAQYLSPEQARGD 194
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
V DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIG---YMAPEYGREG 534
I HR++ I+ S +N DFG+A+ + S+ TQT A IG Y++PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV--TQTAAVIGTAQYLSPEQARGD 194
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
V DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIG---YMAPEYGREG 534
I HR++ I+ S +N DFG+A+ + S+ TQT A IG Y++PE R
Sbjct: 154 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV--TQTAAVIGTAQYLSPEQARGD 211
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
V DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 212 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 258
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIG---YMAPEYGREG 534
I HR++ I+ S +N DFG+A+ + S+ TQT A IG Y++PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV--TQTAAVIGTAQYLSPEQARGD 194
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
V DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPVSVAYQHVREDPIPPSA 241
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 480 IRHRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIG---YMAPEYGREG 534
I HR++ I+ S +N DFG+A+ + S+ TQT A IG Y++PE R
Sbjct: 137 IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV--TQTAAVIGTAQYLSPEQARGD 194
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISV 581
V DVYS G +L E T + P F+G+ + +H D +P S
Sbjct: 195 SVDARSDVYSLGCVLYEVLTGEPP----FTGDSPDSVAYQHVREDPIPPSA 241
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR-KK 557
DFGM++ + D + T+ I +M PE + +T DV+SFG++L E FT K+
Sbjct: 175 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ 234
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P ++ + E+ + I+ +V++ + C V+++ + C
Sbjct: 235 PWFQLSNTEV--------IECITQGRVLERPRV------------CPKEVYDVMLGCWQR 274
Query: 618 SPEERVNAKEI 628
P++R+N KEI
Sbjct: 275 EPQQRLNIKEI 285
Score = 29.3 bits (64), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 24/45 (53%)
Query: 452 MEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496
M VAVK A K+F E +++ +++H +++K C + D
Sbjct: 46 MLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 90
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG+A+ K Q + ++ + T Y APE R G ++ D+YSFG++L+E T
Sbjct: 166 SDFGLARASEKFAQXVXXSRIVGTTAYXAPEALR-GEITPKSDIYSFGVVLLEIITGLPA 224
Query: 559 TDE 561
DE
Sbjct: 225 VDE 227
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 41/90 (45%), Gaps = 11/90 (12%)
Query: 417 LTYLELFQATNGFSEN------NLIDRGGIGYVYKRRIHYGMEVAVK----VFDLQYREA 466
++ EL TN F E N GG G VYK ++ VAVK + D+ E
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEEL 64
Query: 467 FKNFDIECDMMKHIRHRNLIKIISSCSNDD 496
+ FD E + +H NL++++ S+ D
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGD 94
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 91 NYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISG- 149
N L S+ ++ +S+LS L+ SFS+N + + P A NL+ ++E + S +S
Sbjct: 132 NRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLA--NLT-TLERLDISSNKVSDI 188
Query: 150 GIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAAL 209
+ +++NL +LIA N+++ P+ + L L L
Sbjct: 189 SVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGT----LASLTNL 241
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGP 269
LDL +N++S P S LT L L LG+NQI++I S + N
Sbjct: 242 TDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDI 298
Query: 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 299 SP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKV 339
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 33/165 (20%)
Query: 155 ISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDL 214
+ NLT L+ I + N++ P+A L L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITPLA--------------------------NLTNLTGLTL 114
Query: 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLPLEI 274
+N+++ P NLTNL L L SN I+ I S SSN T PL
Sbjct: 115 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSFSSNQVTDLKPL-- 169
Query: 275 GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
NL L ++D+S N S + + L +L+ L N++ P
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 212
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 405 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 462
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 463 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 502
Query: 617 ESPEER 622
+ PEER
Sbjct: 503 KEPEER 508
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 146 ADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 203
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 204 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 243
Query: 617 ESPEER 622
+ PEER
Sbjct: 244 KEPEER 249
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 153 ADFGLAR-LIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 210
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 211 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 250
Query: 617 ESPEER 622
+ PEER
Sbjct: 251 KEPEER 256
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 322 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 379
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 380 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 419
Query: 617 ESPEER 622
+ PEER
Sbjct: 420 KEPEER 425
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 322 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 379
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 380 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 419
Query: 617 ESPEER 622
+ PEER
Sbjct: 420 KEPEER 425
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 322 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 379
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 380 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 419
Query: 617 ESPEER 622
+ PEER
Sbjct: 420 KEPEER 425
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 153 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 210
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 211 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 250
Query: 617 ESPEER 622
+ PEER
Sbjct: 251 KEPEER 256
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 155 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFT 212
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 213 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 257
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 258 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 91 NYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISG- 149
N L S+ ++ +S+LS L+ SFS+N + + P A NL+ ++E + S +S
Sbjct: 132 NRLELSSNTISDISALSGLTSLQQLSFSSNQVTDLKPLA--NLT-TLERLDISSNKVSDI 188
Query: 150 GIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAAL 209
+ +++NL +LIA N+++ P+ + L L L
Sbjct: 189 SVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGT----LASLTNL 241
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGP 269
LDL +N++S P S LT L L LG+NQI++I S + N
Sbjct: 242 TDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDI 298
Query: 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 299 SP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKV 339
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 33/165 (20%)
Query: 155 ISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDL 214
+ NLT L+ I + N++ P+A L L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITPLA--------------------------NLTNLTGLTL 114
Query: 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLPLEI 274
+N+++ P NLTNL L L SN I+ I S SSN T PL
Sbjct: 115 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLSFSSNQVTDLKPL-- 169
Query: 275 GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
NL L ++D+S N S + + L +L+ L N++ P
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 212
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 149 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 206
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 207 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 246
Query: 617 ESPEER 622
+ PEER
Sbjct: 247 KEPEER 252
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 183 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 240
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 241 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 285
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 286 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 312
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 145 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 202
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 203 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 242
Query: 617 ESPEER 622
+ PEER
Sbjct: 243 KDPEER 248
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ +L ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 176 ADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 557 KP 558
P
Sbjct: 236 AP 237
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 147 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 204
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 205 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 244
Query: 617 ESPEER 622
+ PEER
Sbjct: 245 KDPEER 250
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 156 ADFGLAR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 214 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 253
Query: 617 ESPEER 622
+ PEER
Sbjct: 254 KDPEER 259
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 478 KHIRHRNLIKIISSCSNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG 534
K HRNL ++D F DFGM + + + D + L + +MAPE ++G
Sbjct: 150 KKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG 208
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594
+T+ D++SFG++L E + + + S E LK V+D L Q D
Sbjct: 209 VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD 256
Query: 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C V +L C +P R EI
Sbjct: 257 -------NCPERVTDLMRMCWQFNPNMRPTFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSCS-NDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 155 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 212
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 213 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 257
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 258 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 284
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 154 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 211
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 212 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 256
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 257 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 161 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 263
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 264 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 148 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 205
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 206 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 250
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 251 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 277
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + D + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 232 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 272
Query: 619 PEERVNAKEI 628
P+ R EI
Sbjct: 273 PKMRPTFLEI 282
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 151 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 208
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 209 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 253
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 254 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 280
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 23/154 (14%)
Query: 478 KHIRHRNLIKIISSCSNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG 534
K HRNL ++D F DFGM + + + D + L + +MAPE ++G
Sbjct: 149 KKFVHRNLAARNCMVAHD-FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG 207
Query: 535 RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594
+T+ D++SFG++L E + + + S E LK V+D L Q D
Sbjct: 208 VFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKF------------VMDGGYLDQPD 255
Query: 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C V +L C +P R EI
Sbjct: 256 -------NCPERVTDLMRMCWQFNPNMRPTFLEI 282
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + D + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 169 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 228
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 229 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 269
Query: 619 PEERVNAKEI 628
P+ R EI
Sbjct: 270 PKMRPTFLEI 279
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 154 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 211
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 212 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 256
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 257 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 283
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 161 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 218
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 219 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 263
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 264 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 290
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 66/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSC-SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 152 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 209
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 210 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 254
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C +F L C +P+ R + EI
Sbjct: 255 ----NCPDMLFELMRMCWQYNPKMRPSFLEI 281
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 474 CDMMKHIR-----HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYM 526
C+ M+++ HR+L ++ S N +DFG+ K + S Q + +
Sbjct: 112 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 166
Query: 527 APEYGREGRVSTNGDVYSFGIMLIETFT 554
APE RE + ST DV+SFGI+L E ++
Sbjct: 167 APEALREKKFSTKSDVWSFGILLWEIYS 194
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 474 CDMMKHIR-----HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYM 526
C+ M+++ HR+L ++ S N +DFG+ K + S Q + +
Sbjct: 127 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 181
Query: 527 APEYGREGRVSTNGDVYSFGIMLIETFT 554
APE RE + ST DV+SFGI+L E ++
Sbjct: 182 APEALREKKFSTKSDVWSFGILLWEIYS 209
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG A D T + +MAPE S DV+S+GI+L E TR+KP
Sbjct: 148 CDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 202
Query: 559 TDEI 562
DEI
Sbjct: 203 FDEI 206
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 432 NNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISS 491
++ RG G V K + +VA+K ++ K F +E + + H N++K+ +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 492 CSN 494
C N
Sbjct: 70 CLN 72
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 12/88 (13%)
Query: 474 CDMMKHIR-----HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYM 526
C+ M+++ HR+L ++ S N +DFG+ K + S Q + +
Sbjct: 299 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 353
Query: 527 APEYGREGRVSTNGDVYSFGIMLIETFT 554
APE RE + ST DV+SFGI+L E ++
Sbjct: 354 APEALREKKFSTKSDVWSFGILLWEIYS 381
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG A D T + +MAPE S DV+S+GI+L E TR+KP
Sbjct: 149 CDFGTAC-----DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKP 203
Query: 559 TDEI 562
DEI
Sbjct: 204 FDEI 207
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Query: 432 NNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISS 491
++ RG G V K + +VA+K ++ K F +E + + H N++K+ +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIK--QIESESERKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 492 CSN 494
C N
Sbjct: 71 CLN 73
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 174 ADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 557 KP 558
P
Sbjct: 234 AP 235
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 24/126 (19%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+ + L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 323 ADFGLGR-LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGR- 380
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI--KGQCVSFVFNLAMKCTV 616
+P M V+ +L Q ++ + + +C + +L +C
Sbjct: 381 ------------------VPYPGM--VNREVLDQVERGYRMPCPPECPESLHDLMCQCWR 420
Query: 617 ESPEER 622
+ PEER
Sbjct: 421 KDPEER 426
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + D + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 172 GDFGMTRDIXETDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 232 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 272
Query: 619 PEERVNAKEI 628
P R EI
Sbjct: 273 PNMRPTFLEI 282
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + D + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 172 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 232 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 272
Query: 619 PEERVNAKEI 628
P+ R EI
Sbjct: 273 PKMRPTFLEI 282
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 12/88 (13%)
Query: 474 CDMMKHIR-----HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYM 526
C+ M+++ HR+L ++ S N +DFG+ K + S Q + +
Sbjct: 118 CEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK-----EASSTQDTGKLPVKWT 172
Query: 527 APEYGREGRVSTNGDVYSFGIMLIETFT 554
APE RE ST DV+SFGI+L E ++
Sbjct: 173 APEALREAAFSTKSDVWSFGILLWEIYS 200
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 101/225 (44%), Gaps = 18/225 (8%)
Query: 91 NYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISG- 149
N L S+ ++ +S+LS L+ +FS+N + + P A NL+ ++E + S +S
Sbjct: 132 NRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLA--NLT-TLERLDISSNKVSDI 188
Query: 150 GIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAAL 209
+ +++NL +LIA N+++ P+ + L L L
Sbjct: 189 SVLAKLTNLESLIAT---NNQISDITPLGILTNLDELSLNGNQLKDIGT----LASLTNL 241
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGP 269
LDL +N++S P S LT L L LG+NQI++I S + N
Sbjct: 242 TDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELNENQLEDI 298
Query: 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 299 SP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKV 339
Score = 32.3 bits (72), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 64/165 (38%), Gaps = 33/165 (20%)
Query: 155 ISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDL 214
+ NLT L+ I + N++ P+A L L L L
Sbjct: 81 LKNLTKLVDILMNNNQIADITPLA--------------------------NLTNLTGLTL 114
Query: 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLPLEI 274
+N+++ P NLTNL L L SN I+ I S SSN T PL
Sbjct: 115 FNNQITDIDP--LKNLTNLNRLELSSNTISDI-SALSGLTSLQQLNFSSNQVTDLKPL-- 169
Query: 275 GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
NL L ++D+S N S + + L +L+ L N++ P
Sbjct: 170 ANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 21/131 (16%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR-KK 557
DFGM++ + D + T+ I +M PE + +T DV+S G++L E FT K+
Sbjct: 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQ 229
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P ++ + E V++ + + Q + C V+ L + C
Sbjct: 230 PWYQLSNNE--------------VIECITQGRVLQRPR------TCPQEVYELMLGCWQR 269
Query: 618 SPEERVNAKEI 628
P R N K I
Sbjct: 270 EPHMRKNIKGI 280
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 459 FDLQYREAFKNFDIECDMMKHIRHRNLI----KIISSCSNDDFKADFGMAKPLLKEDQSL 514
F Q + + + + + + + RN++ K++ C DFG+A+ ++ + +
Sbjct: 177 FAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC-------DFGLARDIMSDSNYV 229
Query: 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
++ + +MAPE EG + DV+S+GI+L E F+
Sbjct: 230 VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + D + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 171 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 230
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 231 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 271
Query: 619 PEERVNAKEI 628
P+ R EI
Sbjct: 272 PKMRPTFLEI 281
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
DFGM++ + D + +T+ I +M PE + +T DV+SFG++L E FT K
Sbjct: 177 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 235
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
DFGM++ + D + +T+ I +M PE + +T DV+SFG++L E FT K
Sbjct: 171 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 229
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 500 DFGMAKPLLKEDQSLIQT-QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG+AK L + SL QT L T+ Y +PE + D+YS GI+L E + P
Sbjct: 154 DFGIAKAL--SETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
Query: 559 TDEIFSGE----MTLKHWVNDLLP 578
F+GE + +KH + D +P
Sbjct: 212 ----FNGETAVSIAIKH-IQDSVP 230
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 174 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 233
Query: 557 KP 558
P
Sbjct: 234 AP 235
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 557 KP 558
P
Sbjct: 235 AP 236
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 173 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 557 KP 558
P
Sbjct: 233 AP 234
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 194 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 253
Query: 557 KP 558
P
Sbjct: 254 AP 255
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
DFGM++ + D + +T+ I +M PE + +T DV+SFG++L E FT K
Sbjct: 200 GDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGK 258
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 170 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 229
Query: 557 KP 558
P
Sbjct: 230 AP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 175 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 557 KP 558
P
Sbjct: 235 AP 236
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 172 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 231
Query: 557 KP 558
P
Sbjct: 232 AP 233
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 173 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 232
Query: 557 KP 558
P
Sbjct: 233 AP 234
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 176 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 235
Query: 557 KP 558
P
Sbjct: 236 AP 237
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 167 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 226
Query: 557 KP 558
P
Sbjct: 227 AP 228
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 557 KP 558
P
Sbjct: 235 AP 236
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE GR + DV+SFGI+L E T+ +
Sbjct: 147 ADFGLAR-LIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGR 204
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 193 ADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 252
Query: 557 KP 558
P
Sbjct: 253 AP 254
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 180 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 239
Query: 557 KP 558
P
Sbjct: 240 AP 241
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 175 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 234
Query: 557 KP 558
P
Sbjct: 235 AP 236
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSCS-NDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 146 HRDLAA--RNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFT 203
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 204 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 248
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C + L C +P+ R + EI
Sbjct: 249 ----NCPDMLLELMRMCWQYNPKMRPSFLEI 275
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ + ++ + +T A + +MA E + + +T DV+SFG++L E TR
Sbjct: 234 ADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRG 293
Query: 557 KP 558
P
Sbjct: 294 AP 295
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 25/151 (16%)
Query: 482 HRNLIKIISSCS-NDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS 537
HR+L +C +DF DFGM + + + D + L + +M+PE ++G +
Sbjct: 148 HRDLAA--RNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT 205
Query: 538 TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597
T DV+SFG++L E T + + S E L+ V++ LL + D
Sbjct: 206 TYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF------------VMEGGLLDKPD--- 250
Query: 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
C + L C +P+ R + EI
Sbjct: 251 ----NCPDMLLELMRMCWQYNPKMRPSFLEI 277
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXS 262
L L L LDL +N++S P S LT L L LG+NQI++I S +
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELN 290
Query: 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
N P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 291 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFSNNKV 338
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR-KK 557
+DFGM + +L +DQ + T + + APE + S+ DV++FGI++ E F+ K
Sbjct: 146 SDFGMTRYVL-DDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKM 204
Query: 558 PTDEIFSGEMTLK 570
P D + E+ LK
Sbjct: 205 PYDLYTNSEVVLK 217
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXS 262
L L L LDL +N++S P S LT L L LG+NQI++I S +
Sbjct: 238 LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELN 294
Query: 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
N P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 295 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFANNKV 342
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+A+ +L + +Q A + + A E + R +T DV+SFG++L E TR
Sbjct: 166 ADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRG 225
Query: 557 KP 558
P
Sbjct: 226 AP 227
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 158 LTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLC-RLAALFQLDLGS 216
LT+L +YLGGNKL S+P S+P+ + +L L +L L +
Sbjct: 51 LTSLTQLYLGGNKLQ-SLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 217 NKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
N+L F LT L+ L L NQ+ S+P
Sbjct: 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKSVP 140
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSN 264
L +L QL LG NKL F LT+L L+L +NQ+ S+P+ +
Sbjct: 50 ELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109
Query: 265 FFTGPLPLEI-GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
LP + L L + L N V L LQY++L N + P
Sbjct: 110 NQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP 165
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 24/113 (21%)
Query: 212 LDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLP 271
LDL +N L F LT+L L+LG N++ S+P+
Sbjct: 33 LDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGV--------------------- 71
Query: 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGD 324
L L ++LS N + L L+ L L N+LQ S+PD + D
Sbjct: 72 --FNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFD 121
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+AK L L +D +++ + I + APE + S DV+SFG++L E FT
Sbjct: 153 ADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 209
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 24/91 (26%)
Query: 157 NLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGS 216
+LT L +YLGGN+L S+P RL L +L L +
Sbjct: 105 HLTQLDKLYLGGNQLK-SLPSGVFD-----------------------RLTKLKELRLNT 140
Query: 217 NKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
N+L +F LTNL++L L +NQ+ S+P
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 27/119 (22%)
Query: 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXX 260
DDL L L L +N+L+ F +LT L L+LG NQ+ S+PS
Sbjct: 80 DDLTELGTL---GLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGV---------- 126
Query: 261 XSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
L L ++ L+ N + L +LQ L L N+LQ S+P
Sbjct: 127 -------------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPL 270
+LDL S L+ A+F LT L L+L NQ+ ++ + +N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 271 PLEI-GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
PL + +L L K+ L N + L L+ L L N+LQ SIP
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 24/91 (26%)
Query: 157 NLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGS 216
+LT L +YLGGN+L S+P RL L +L L +
Sbjct: 105 HLTQLDKLYLGGNQLK-SLPSGVFD-----------------------RLTKLKELRLNT 140
Query: 217 NKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
N+L +F LTNL++L L +NQ+ S+P
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 48/119 (40%), Gaps = 27/119 (22%)
Query: 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXX 260
DDL L L L +N+L+ F +LT L L+LG NQ+ S+PS
Sbjct: 80 DDLTELGTL---GLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGV---------- 126
Query: 261 XSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
L L ++ L+ N + L +LQ L L N+LQ S+P
Sbjct: 127 -------------FDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVP 171
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 2/110 (1%)
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPL 270
+LDL S L+ A+F LT L L+L NQ+ ++ + +N L
Sbjct: 39 KLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASL 98
Query: 271 PLEI-GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
PL + +L L K+ L N + L L+ L L N+LQ SIP
Sbjct: 99 PLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 143 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 145 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXS 262
L L L LDL +N++S P S LT L L LG+NQI++I S +
Sbjct: 234 LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELN 290
Query: 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
N P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 291 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKV 338
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 52/112 (46%), Gaps = 7/112 (6%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXS 262
L L L LDL +N++S P S LT L L LG+NQI++I S +
Sbjct: 239 LASLTNLTDLDLANNQISNLAPLS--GLTKLTELKLGANQISNI-SPLAGLTALTNLELN 295
Query: 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314
N P I NLK L + L NN S + P++ L LQ LF N++
Sbjct: 296 ENQLEDISP--ISNLKNLTYLTLYFNNISDISPVS--SLTKLQRLFFYNNKV 343
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 148 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 145 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 24/110 (21%)
Query: 138 EIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXX 197
+I ++H I+ P +L NL +YLG N+L G++P+
Sbjct: 43 QILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVG------------------- 82
Query: 198 SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+ D L +L L DLG+N+L+ A F L +L+ L + N++T +P
Sbjct: 83 -VFDSLTQLTVL---DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELP 128
Score = 35.4 bits (80), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 209 LFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
L +L LGSN+L F +LT L L LG+NQ+T +PS
Sbjct: 66 LKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPS 105
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Query: 212 LDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP-STXXXXXXXXXXXXSSNFFTGPL 270
L L N+++ P F +L NL+ L+LGSNQ+ ++P +N T L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-L 103
Query: 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
P + + V +K N +P I L L +L L+ N+L+ SIP
Sbjct: 104 PSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK-SIP 151
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 165 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 222
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
+DFGM + +L +DQ T T + + +PE R S+ DV+SFG+++ E F+ K
Sbjct: 146 SDFGMTRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG+++ LK L T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 182 DFGLSR--LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 147 RDLVKI----------GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 197 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 238
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDR 259
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 157 RDLVKI----------GDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASD 206
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 207 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 248
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDR 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)
Query: 480 IRHRNL----IKIISSCSNDDFK------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPE 529
I HR+L I I+ N D DFG+A+ E + +MAPE
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR----EWHRTTKMSAAGAYAWMAPE 184
Query: 530 YGREGRVSTNGDVYSFGIMLIETFTRKKP 558
R S DV+S+G++L E T + P
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 151 RDLVKI----------GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 201 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 242
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDR 263
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG+++ LK L T +MAPE R+ + DVYSFG++L E T ++P
Sbjct: 182 DFGLSR--LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+AK L L +D +++ + I + APE + S DV+SFG++L E FT
Sbjct: 156 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 147 RDLVKI----------GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 197 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 238
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDR 259
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 147 RDLVKI----------GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 196
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 197 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 238
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 239 DCPQDIYNVMVQCWAHKPEDR 259
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 151 RDLVKI----------GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 200
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 201 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 242
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 243 DCPQDIYNVMVQCWAHKPEDR 263
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+AK L L +D +++ + I + APE + S DV+SFG++L E FT
Sbjct: 169 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+AK L L +D +++ + I + APE + S DV+SFG++L E FT
Sbjct: 157 ADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+D G+ + + D + +L I +MAPE G+ S + D++S+G++L E F+
Sbjct: 170 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---- 225
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
L P D + + + C ++V+ L ++C E
Sbjct: 226 ---------------YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEF 270
Query: 619 PEERVNAKEI 628
P R K+I
Sbjct: 271 PSRRPRFKDI 280
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 54/141 (38%), Gaps = 29/141 (20%)
Query: 483 RNLIKIISSCSNDDFKADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREGRVSTNGD 541
R+L+KI DFG+ + L + +D ++Q + APE + S D
Sbjct: 157 RDLVKI----------GDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASD 206
Query: 542 VYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601
+ FG+ L E FT + +G L H + +E +
Sbjct: 207 TWMFGVTLWEMFTYGQEPWIGLNGSQIL------------------HKIDKEGERLPRPE 248
Query: 602 QCVSFVFNLAMKCTVESPEER 622
C ++N+ ++C PE+R
Sbjct: 249 DCPQDIYNVMVQCWAHKPEDR 269
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFGM + + + + L + +MAPE ++G +T+ D++SFG++L E + +
Sbjct: 172 GDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQ 231
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ S E LK V+D L Q D C V +L C +
Sbjct: 232 PYQGLSNEQVLKF------------VMDGGYLDQPD-------NCPERVTDLMRMCWQFN 272
Query: 619 PEERVNAKEI 628
P+ R EI
Sbjct: 273 PKMRPTFLEI 282
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HRNL ++ + ADFG+A L +D+ L+ ++ I +MA E G+ +
Sbjct: 138 HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQ 197
Query: 540 GDVYSFGIMLIETFT 554
DV+S+G+ + E T
Sbjct: 198 SDVWSYGVTVWELMT 212
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 482 HRNLIK---IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVST 538
HRNL ++ S S ADFG+A L +D+ L+ ++ I +MA E G+ +
Sbjct: 156 HRNLAARNVLLKSPSQVQV-ADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTH 214
Query: 539 NGDVYSFGIMLIETFT 554
DV+S+G+ + E T
Sbjct: 215 QSDVWSYGVTVWELMT 230
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S +N DFG+A+ + K + + T + +MAPE + ST
Sbjct: 222 HRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTK 281
Query: 540 GDVYSFGIMLIETFT 554
DV+S+G++L E F+
Sbjct: 282 SDVWSYGVLLWEIFS 296
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 19/130 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+D G+ + + D + +L I +MAPE G+ S + D++S+G++L E F+
Sbjct: 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS---- 242
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
L P D + + + C ++V+ L ++C E
Sbjct: 243 ---------------YGLQPYCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEF 287
Query: 619 PEERVNAKEI 628
P R K+I
Sbjct: 288 PSRRPRFKDI 297
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 57/129 (44%), Gaps = 22/129 (17%)
Query: 207 AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQI--------------TSIPSTXXX 252
++L +LDL SN L F P F + L +L L + Q+ TSI +
Sbjct: 171 SSLRKLDLSSNPLKEFSPGCFQTIGKLFALLLNNAQLNPHLTEKLCWELSNTSIQNLSLA 230
Query: 253 XXXXXXXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312
S+ F+G L+ N L ++DLS NN V + YL L+YL LEYN
Sbjct: 231 NNQLLATSEST--FSG---LKWTN---LTQLDLSYNNLHDVGNGSFSYLPSLRYLSLEYN 282
Query: 313 RLQGSIPDS 321
+Q P S
Sbjct: 283 NIQRLSPRS 291
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 149 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 207
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 208 QKPYRGMKGSEVT 220
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 147 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 205
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 206 QKPYRGMKGSEVT 218
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 194 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 153 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 212 QKPYRGMKGSEVT 224
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 208 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 32/55 (58%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 207 DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 167 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 225
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 226 QKPYRGMKGSEVT 238
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 153 SDFGLSKAL-RADENXYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 211
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 212 QKPYRGMKGSEVT 224
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 202 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
+DFG+++ + +ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 159 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 217
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 218 QKPYRGMKGSEVT 230
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ ++ + +++ + +MAPE + + DV+S+GI+L E F+
Sbjct: 200 GDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
+DFG+++ + +ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 192 SDFGLSRDVYEEDSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 169 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 228 QKPYRGMKGSEVT 240
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L + D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 169 SDFGLSKAL-RADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 227
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 228 QKPYRGMKGSEVT 240
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 207 AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQI---------TSIPSTXXXXXXXX 257
++L +L+L SN++ F P F + L L L + Q+ + +T
Sbjct: 171 SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLS 230
Query: 258 XXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ 315
S+ T L L+ NL +L DLS NN + V + +L L+Y FLEYN +Q
Sbjct: 231 NSQLSTTSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 285
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 151 IPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLC-RLAAL 209
+P+++ TN+ + L N+L +P A + +LC +L L
Sbjct: 19 VPDDLP--TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 75
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
L+L N+LS +F TNL LHL SN I I
Sbjct: 76 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 112
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 207 AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQI---------TSIPSTXXXXXXXX 257
++L +L+L SN++ F P F + L L L + Q+ + +T
Sbjct: 176 SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLS 235
Query: 258 XXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ 315
S+ T L L+ NL +L DLS NN + V + +L L+Y FLEYN +Q
Sbjct: 236 NSQLSTTSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 290
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 151 IPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLC-RLAAL 209
+P+++ TN+ + L N+L +P A + +LC +L L
Sbjct: 24 VPDDLP--TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 80
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
L+L N+LS +F TNL LHL SN I I
Sbjct: 81 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 117
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 12/118 (10%)
Query: 207 AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQI---------TSIPSTXXXXXXXX 257
++L +L+L SN++ F P F + L L L + Q+ + +T
Sbjct: 181 SSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLS 240
Query: 258 XXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ 315
S+ T L L+ NL +L DLS NN + V + +L L+Y FLEYN +Q
Sbjct: 241 NSQLSTTSNTTFLGLKWTNLTML---DLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQ 295
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 151 IPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLC-RLAAL 209
+P+++ TN+ + L N+L +P A + +LC +L L
Sbjct: 29 VPDDLP--TNITVLNLTHNQLR-RLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPML 85
Query: 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
L+L N+LS +F TNL LHL SN I I
Sbjct: 86 KVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKI 122
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 34/56 (60%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
+DFG+++ + +ED + ++Q + +MA E + +T DV+SFG++L E T
Sbjct: 192 SDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 33/131 (25%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFGM++ + + + APE GR S+ DV+SFGI+L ETF
Sbjct: 255 SDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF----- 309
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQ-------CVSFVFNLA 611
S+ +L +Q+ + FV KG C VF L
Sbjct: 310 ---------------------SLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 612 MKCTVESPEER 622
+C P +R
Sbjct: 349 EQCWAYEPGQR 359
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HRNL I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSV 197
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 198 ASDVWSFGVVLYELFT 213
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 81
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 233 SDVWSFGVLLWEIFT 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L+ D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 511 SDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 569
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 570 QKPYRGMKGSEVT 582
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLAT--IGYMAPEYGREGRVSTNGDVYSFGIMLIETFTR- 555
+DFG++K L+ D++ + QT + + APE + S+ DV+SFG+++ E F+
Sbjct: 512 SDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYG 570
Query: 556 KKPTDEIFSGEMT 568
+KP + E+T
Sbjct: 571 QKPYRGMKGSEVT 583
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 482 HRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S S ADFG+A+ ++++++ + I + APE G +
Sbjct: 134 HRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 540 GDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599
DV+SFGI+L+E T + +P M + +
Sbjct: 193 SDVWSFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPR 233
Query: 600 KGQCVSFVFNLAMKCTVESPEER 622
C ++N+ M+C PEER
Sbjct: 234 PENCPEELYNIMMRCWKNRPEER 256
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 167 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 227 SDVWSFGVLLWEIFS 241
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 50/131 (38%), Gaps = 33/131 (25%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFGM++ + + + APE GR S+ DV+SFGI+L ETF
Sbjct: 255 SDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETF----- 309
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQ-------CVSFVFNLA 611
S+ +L +Q+ + FV KG C VF L
Sbjct: 310 ---------------------SLGASPYPNLSNQQTREFVEKGGRLPCPELCPDAVFRLM 348
Query: 612 MKCTVESPEER 622
+C P +R
Sbjct: 349 EQCWAYEPGQR 359
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 230
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 231 SDVWSFGVLLWEIFS 245
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 62/157 (39%), Gaps = 27/157 (17%)
Query: 92 YLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI 151
YL KL+ +S+L L Y + N L + L+ E+ + N +
Sbjct: 67 YLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE--NQLQSL 124
Query: 152 PEEI-SNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALF 210
P+ + LTNL +YL N+L S+P +L L
Sbjct: 125 PDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFD-----------------------KLTNLT 160
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+LDL +N+L F LT L+ L L NQ+ S+P
Sbjct: 161 RLDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKSVP 197
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 27/154 (17%)
Query: 212 LDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLP 271
L LG NKL ++ LTNL L L NQ+ S+P+
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFD------------------- 106
Query: 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXX 331
++ NLK L+ ++ N + L +L YL+L +N+LQ S+P + D
Sbjct: 107 -KLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTR 161
Query: 332 XXXXXXXXXXXPISL-EKLLDLKDINVSFNKLEG 364
P + +KL LK ++++ N+L+
Sbjct: 162 LDLDNNQLQSLPEGVFDKLTQLKQLSLNDNQLKS 195
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 140 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 199
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 243
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 244 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 283
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 167 HRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 226
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 227 SDVWSFGVLLWEIFS 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 266
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 267 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 482 HRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HRNL I+ S + ADFG+A+ L+++++ + I + APE G +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIK 186
Query: 540 GDVYSFGIMLIETFTRKK 557
DV+SFGI+L E T +
Sbjct: 187 SDVWSFGILLTEIVTHGR 204
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 162 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 221
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 222 SDVWSFGVLLWEIFS 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 173 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 232
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 233 SDVWSFGVLLWEIFS 247
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 208 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 267
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 268 SDVWSFGVLLWEIFS 282
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 266
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 267 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 22/143 (15%)
Query: 482 HRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S S ADFG+A+ ++++++ + I + APE G +
Sbjct: 307 HRDLRAANILVSASLVCKIADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 540 GDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599
DV+SFGI+L+E T + +P M + +
Sbjct: 366 SDVWSFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPR 406
Query: 600 KGQCVSFVFNLAMKCTVESPEER 622
C ++N+ M+C PEER
Sbjct: 407 PENCPEELYNIMMRCWKNRPEER 429
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 276 SDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 274 SDVWSFGVLLWEIFS 288
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 163 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 222
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 266
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 267 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 306
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 149 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 252
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 253 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 155 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 214
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 258
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 259 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 298
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 149 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 208
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 252
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 253 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 281 SDVWSFGVLLWEIFS 295
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 148 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 251
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 252 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 291
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S N DFG+A+ + K+ + + + +MAPE + +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E F+
Sbjct: 283 SDVWSFGVLLWEIFS 297
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSLIQTQT--LATIGYMAPEYGREGRVS 537
HR+L I+ N DFG+ K +L +D+ + + + I + APE E + S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTK-VLPQDKEFFKVKEPGESPIFWYAPESLTESKFS 195
Query: 538 TNGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 196 VASDVWSFGVVLYELFT 212
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 148 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 207
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
+ +M PE EG ++ D +SFG++L E F+
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG++L E FT
Sbjct: 177 ADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 214 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 273
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 274 SDVWSFGVLLWEIFT 288
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 23/108 (21%)
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSN 264
RL L +L+L N+L+G P +F ++++ L LG N+I I S+
Sbjct: 52 RLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEI---------------SNK 96
Query: 265 FFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312
F G L L ++L N S V+P + +L L L L N
Sbjct: 97 MFLG--------LHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASN 136
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 162 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 221
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 222 SDVWSFGVLLWEIFT 236
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 233 SDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 166 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 225
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 226 SDVWSFGVLLWEIFT 240
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 151 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 153 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 210
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 165 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 224
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 225 SDVWSFGVLLWEIFT 239
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 165 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 224
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 268
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 269 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 308
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 248
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 249 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 292
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 293 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 152 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 209
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 166 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAML 225
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 226 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 269
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 270 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 309
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 233 SDVWSFGVLLWEIFT 247
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + D+ ADFG+A+ + D T + +MAPE + +
Sbjct: 173 HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQ 232
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 233 SDVWSFGVLLWEIFT 247
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 200
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 201 ASDVWSFGVVLYELFT 216
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 84
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 42/170 (24%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 149 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAML 208
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581
+ +M PE EG ++ D +SFG++L E F+ G M N
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSL---------GYMPYPSKSN------- 252
Query: 582 MKVVDAHLLSQEDKHFVIKG-------QCVSFVFNLAMKCTVESPEERVN 624
QE FV G C V+ + +C PE+R N
Sbjct: 253 ----------QEVLEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 292
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 160 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 217
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 151 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 195
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 196 ASDVWSFGVVLYELFT 211
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 79
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 215 ASDVWSFGVVLYELFT 230
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 214
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 215 ASDVWSFGVVLYELFT 230
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 98
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 197 ASDVWSFGVVLYELFT 212
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 194
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 195 ASDVWSFGVVLYELFT 210
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 78
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 196
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 197 ASDVWSFGVVLYELFT 212
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 80
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
+DL R + L++L LG N++ S L LR LHL +N+++ +P+
Sbjct: 211 EDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPA 258
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
DD L L+ L L +NK+S +F L L+ L++ N + IP
Sbjct: 72 DDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIP 118
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
D G AK L DQ + T+ + T+ Y+APE + + + D +SFG + E T +P
Sbjct: 168 DLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 203
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 204 ASDVWSFGVVLYELFT 219
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 87
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
D G AK L DQ + T+ + T+ Y+APE + + + D +SFG + E T +P
Sbjct: 167 DLGYAKEL---DQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 159 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 201
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 202 ASDVWSFGVVLYELFT 217
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 85
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T
Sbjct: 157 ADFGLAR-LIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 202
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 203 ASDVWSFGVVLYELFT 218
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 86
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 199
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 200 ASDVWSFGVVLYELFT 215
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 83
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 482 HRNLI--KIISSCSNDDFKADFGMAKPLLKEDQSL-IQTQTLATIGYMAPEYGREGRVST 538
HR+L I+ N DFG+ K L ++ + ++ + I + APE E + S
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSV 227
Query: 539 NGDVYSFGIMLIETFT 554
DV+SFG++L E FT
Sbjct: 228 ASDVWSFGVVLYELFT 243
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 451 GMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G VAVK E ++F+ E +++K ++H N++K C
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVC 111
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+PD L L LDL +L P +F +L++L+ L++ SNQ+ S+P
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVP 510
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 9/93 (9%)
Query: 471 DIECDMM----KHIRHRNLIK--IISSCSNDDFKA---DFGMAKPLLKEDQSLIQTQTLA 521
DI C H HR++ + +C A DFGMA+ + + +
Sbjct: 175 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAML 234
Query: 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
+ +M PE EG ++ D +SFG++L E F+
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 151 ADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 37.0 bits (84), Expect = 0.036, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
RL L +LDL +N+L+ F LT L L L NQ+ SIP
Sbjct: 52 RLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 156 ADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 213
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 37.0 bits (84), Expect = 0.037, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
RL L +LDL +N+L+ F LT L L L NQ+ SIP
Sbjct: 60 RLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 102
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 146 ADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 203
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 157 ADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++++ + I + APE G + DV+SFGI+L E T +
Sbjct: 161 ADFGLAR-LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 218
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLI-KIISSCSNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L + + N+ K ADFG+A+ + D T + +MAPE + +
Sbjct: 180 HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG+++ E FT
Sbjct: 240 SDVWSFGVLMWEIFT 254
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 36.6 bits (83), Expect = 0.043, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
RL L +LDL +N+L+ F LT L L L NQ+ SIP
Sbjct: 52 RLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIP 94
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
D+ L +L+L N +S P +F NL NLR+L L SN++ IP
Sbjct: 50 DEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIP 96
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ L+++ + + I + APE G + DV+SFGI+L E T +
Sbjct: 151 ADFGLAR-LIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGR 208
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 36.2 bits (82), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 23/129 (17%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPT 559
DFG++ L+ E + + + T YM+PE + S D++S G+ L+E + P
Sbjct: 151 DFGVSGQLIDE----MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPR 206
Query: 560 DEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESP 619
+ E+ L + VN+ P + + + S E + FV KC +++P
Sbjct: 207 PPMAIFEL-LDYIVNEPPP-----KLPSAVFSLEFQDFV-------------NKCLIKNP 247
Query: 620 EERVNAKEI 628
ER + K++
Sbjct: 248 AERADLKQL 256
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 61/165 (36%), Gaps = 22/165 (13%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
RE K D K R ++ S D ADFG+A L D + + + T
Sbjct: 123 REILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNXFVGTP 180
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK 583
+MAPE ++ D++S GI IE + P +DL P+ V+
Sbjct: 181 FWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPN--------------SDLHPMRVL- 225
Query: 584 VVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628
L ++ ++GQ C + P R AKE+
Sbjct: 226 -----FLIPKNSPPTLEGQHSKPFKEFVEACLNKDPRFRPTAKEL 265
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 186 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 188 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 482 HRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L ++ + +N ADFG+A+ + D T + +MAPE + +
Sbjct: 180 HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQ 239
Query: 540 GDVYSFGIMLIETFT 554
DV+SFG+++ E FT
Sbjct: 240 SDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 191 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
RE K D K R ++ S + ADFG+A L D + + + T
Sbjct: 126 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTP 183
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562
+MAPE ++ + D++S GI IE + P E+
Sbjct: 184 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
RE K D K R ++ S + ADFG+A L D + + + T
Sbjct: 131 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTP 188
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562
+MAPE ++ + D++S GI IE + P E+
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.8 bits (81), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
RE K D K R ++ S + ADFG+A L D + + + T
Sbjct: 111 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNXFVGTP 168
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562
+MAPE ++ + D++S GI IE + P E+
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 245 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
RE K D K R ++ S + ADFG+A L D + + + T
Sbjct: 111 REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT--DTQIKRNTFVGTP 168
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562
+MAPE ++ + D++S GI IE + P E+
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 474 CDMMKHIR-----HRNLIKIISSCSNDDFK----ADFGMAKPLLKEDQSLIQTQTLATIG 524
C+ M+++ HR+L +C +D +DFG+++ +L +D+ + +
Sbjct: 130 CEAMEYLESKQFLHRDLAA--RNCLVNDQGVVKVSDFGLSRYVL-DDEETSSVGSKFPVR 186
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584
+ PE + S+ D+++FG+++ E ++ K E F+ T +H L ++
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------RL 240
Query: 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
HL S++ V+ + C E +ER
Sbjct: 241 YRPHLASEK-------------VYTIMYSCWHEKADER 265
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.8 bits (81), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ + D I +M PE R +T DV+++G++L E F+
Sbjct: 216 ADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3V47|A Chain A, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
pdb|3V47|B Chain B, Crystal Structure Of The N-Tetminal Fragment Of Zebrafish
Tlr5 In Complex With Salmonella Flagellin
Length = 455
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 2/113 (1%)
Query: 213 DLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLPL 272
DL +K+ + + F + T+L L L N+I I S F G +
Sbjct: 281 DLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDS 340
Query: 273 EI-GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGD 324
+ NL L +DLS N+ + + L +L+ L L+ N+L+ S+PD I D
Sbjct: 341 RMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLK-SVPDGIFD 392
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
L L LDL N + SF L NL+ L L +NQ+ S+P
Sbjct: 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVP 387
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 27/157 (17%)
Query: 92 YLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI 151
YL KL+ +S+L L Y + N L + L+ E+ + N +
Sbjct: 67 YLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE--NQLQSL 124
Query: 152 PEEI-SNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALF 210
P+ + LTNL + L N+L S+P +L L
Sbjct: 125 PDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFD-----------------------KLTNLT 160
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+LDL N+L F LT L+ L L NQ+ S+P
Sbjct: 161 ELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 62/153 (40%), Gaps = 27/153 (17%)
Query: 212 LDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTGPLP 271
L LG NKL ++ LTNL L L NQ+ S+P+
Sbjct: 68 LALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFD------------------- 106
Query: 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDXXXXXXX 331
++ NLK L+ ++ N + L +L YL L +N+LQ S+P + D
Sbjct: 107 -KLTNLKELVLVE---NQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTE 161
Query: 332 XXXXXXXXXXXPISL-EKLLDLKDINVSFNKLE 363
P + +KL LKD+ + N+L+
Sbjct: 162 LDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLK 194
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 35.4 bits (80), Expect = 0.099, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 6/50 (12%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
IP D RL L +N+++ P F +L NL+ L+ SN++T+IP+
Sbjct: 31 IPTDKQRLW------LNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPT 74
Score = 32.3 bits (72), Expect = 0.72, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 20/42 (47%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
L L QL SNKL+ F LT L L L N + SIP
Sbjct: 56 LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIP 97
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 36/137 (26%)
Query: 105 SLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAI 164
+L NC+ ++ S +P I Q + W+++ I+ P +L NL +
Sbjct: 15 TLVNCQNIRLAS---------VPAGIPTDKQRL---WLNNNQITKLEPGVFDHLVNLQQL 62
Query: 165 YLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKLSGFVP 224
Y NKL +IP +L L QLDL N L
Sbjct: 63 YFNSNKLT-AIPTGVFD-----------------------KLTQLTQLDLNDNHLKSIPR 98
Query: 225 ASFGNLTNLRSLHLGSN 241
+F NL +L ++L +N
Sbjct: 99 GAFDNLKSLTHIYLYNN 115
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+A+ + D T + +MAPE + + DV+SFG+++ E FT
Sbjct: 199 ADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 209 LFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXSSNFFTG 268
L +L L N L+ +PA NL+NLR L L N++TS+P+ N T
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTT 307
Query: 269 PLPLEIGNL 277
LP E GNL
Sbjct: 308 -LPWEFGNL 315
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 474 CDMMKHIR-----HRNLIKIISSCSNDDFK----ADFGMAKPLLKEDQSLIQTQTLATIG 524
C+ M+++ HR+L +C +D +DFG+++ +L +D+ + +
Sbjct: 130 CEAMEYLESKQFLHRDLAA--RNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVR 186
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584
+ PE + S+ D+++FG+++ E ++ K E F+ T +H L ++
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------RL 240
Query: 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
HL S++ V+ + C E +ER
Sbjct: 241 YRPHLASEK-------------VYTIMYSCWHEKADER 265
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTX-XXXXXXXXXXXSSN 264
LAAL L L N L +F +L NL L L N+I+S+P N
Sbjct: 128 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 187
Query: 265 FFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312
P +L L+ + L NN S + + L+ LQYL L N
Sbjct: 188 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 235
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 1/108 (0%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTX-XXXXXXXXXXXSSN 264
LAAL L L N L +F +L NL L L N+I+S+P N
Sbjct: 127 LAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQN 186
Query: 265 FFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312
P +L L+ + L NN S + + L+ LQYL L N
Sbjct: 187 RVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDN 234
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 438 GGIGYVYKRRIHYGMEVAVKVFDLQ-----YREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G G+ R + Y E+ + DL YR+ K +I D HIR IS
Sbjct: 279 GQAGFPEARAVFYAAEICCGLEDLHRERIVYRD-LKPENILLDDHGHIR-------IS-- 328
Query: 493 SNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIET 552
D G+A + E Q++ + T+GYMAPE + R + + D ++ G +L E
Sbjct: 329 -------DLGLAV-HVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 553 FTRKKP 558
+ P
Sbjct: 379 IAGQSP 384
>pdb|4ARN|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|C Chain C, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARN|D Chain D, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor
pdb|4ARR|A Chain A, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
pdb|4ARR|B Chain B, Crystal Structure Of The N-terminal Domain Of Drosophila
Toll Receptor With The Magic Triangle I3c
Length = 279
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
L L ++ GSNKL FG + L+ L+L SNQ+ S+P
Sbjct: 169 LENLESIEFGSNKLRQMPRGIFGKMPKLKQLNLASNQLKSVP 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 54/126 (42%), Gaps = 25/126 (19%)
Query: 438 GGIGYVYKRRIHYGMEVAVKVFDLQ-----YREAFKNFDIECDMMKHIRHRNLIKIISSC 492
G G+ R + Y E+ + DL YR+ K +I D HIR IS
Sbjct: 279 GQAGFPEARAVFYAAEICCGLEDLHRERIVYRD-LKPENILLDDHGHIR-------IS-- 328
Query: 493 SNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIET 552
D G+A + E Q++ + T+GYMAPE + R + + D ++ G +L E
Sbjct: 329 -------DLGLAV-HVPEGQTI--KGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEM 378
Query: 553 FTRKKP 558
+ P
Sbjct: 379 IAGQSP 384
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 23/174 (13%)
Query: 91 NYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGG 150
NYLT + K+ ++ ++N L S + N ++ I P A +L+ S+ F + I+
Sbjct: 158 NYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISPLA--SLT-SLHYFTAYVNQITDI 214
Query: 151 IPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPD--------- 201
P ++N T L ++ +G NK+ P+A ++ D
Sbjct: 215 TP--VANXTRLNSLKIGNNKITDLSPLANLSQLTWLEIGTNQISDINAVKDLTKLKXLNV 272
Query: 202 ------DLCRLAALFQLD---LGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
D+ L L QL+ L +N+L G LTNL +L L N IT I
Sbjct: 273 GSNQISDISVLNNLSQLNSLFLNNNQLGNEDXEVIGGLTNLTTLFLSQNHITDI 326
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXXS 262
L L L L +G+NK++ ++ NLTNLR L+L + I+ I +
Sbjct: 84 LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYLNEDNISDISPLANLTKXYSLNLGA 141
Query: 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
++ + PL N L + ++ + V P I L DL L L YN+++ P
Sbjct: 142 NHNLSDLSPL--SNXTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISP 194
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 482 HRNLIKIISSCSNDDFK--ADFGMAKPLLKEDQSLIQ-TQTLATIGYMAPEYGREGRVST 538
HR++ S DDF DFG+A D+ L Q T+ T+ Y APE E +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS--ATTDEKLTQLGNTVGTLYYXAPERFSESHATY 214
Query: 539 NGDVYSFGIMLIETFTRKKP 558
D+Y+ +L E T P
Sbjct: 215 RADIYALTCVLYECLTGSPP 234
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 464 REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATI 523
+E K D K R ++ S D ADFG+A L D + + + T
Sbjct: 127 KEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLT--DTQIKRNTFVGTP 184
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562
+MAPE ++ + D++S GI IE + P ++
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 474 CDMMKHIR-----HRNLIKIISSCSNDDFK----ADFGMAKPLLKEDQSLIQTQTLATIG 524
C+ M+++ HR+L +C +D +DFG+++ +L +D+ + +
Sbjct: 115 CEAMEYLESKQFLHRDLAA--RNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVR 171
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584
+ PE + S+ D+++FG+++ E ++ K E F+ T +H L ++
Sbjct: 172 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------RL 225
Query: 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
HL S++ V+ + C E +ER
Sbjct: 226 YRPHLASEK-------------VYTIMYSCWHEKADER 250
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 31/158 (19%)
Query: 474 CDMMKHIR-----HRNLIKIISSCSNDDFK----ADFGMAKPLLKEDQSLIQTQTLATIG 524
C+ M+++ HR+L +C +D +DFG+++ +L +D+ + +
Sbjct: 121 CEAMEYLESKQFLHRDLAA--RNCLVNDQGVVKVSDFGLSRYVL-DDEYTSSVGSKFPVR 177
Query: 525 YMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584
+ PE + S+ D+++FG+++ E ++ K E F+ T +H L ++
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGL------RL 231
Query: 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEER 622
HL S++ V+ + C E +ER
Sbjct: 232 YRPHLASEK-------------VYTIMYSCWHEKADER 256
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG+++ +L +D+ + + + PE + S+ D+++FG+++ E ++ K
Sbjct: 142 SDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 200
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
E F+ T +H L ++ HL S++ V+ + C E
Sbjct: 201 PYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYTIMYSCWHEK 241
Query: 619 PEER 622
+ER
Sbjct: 242 ADER 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG+++ +L +D+ + + + PE + S+ D+++FG+++ E ++ K
Sbjct: 146 SDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 204
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
E F+ T +H L ++ HL S++ V+ + C E
Sbjct: 205 PYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYTIMYSCWHEK 245
Query: 619 PEER 622
+ER
Sbjct: 246 ADER 249
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ + + +++ + +MAPE + DV+S+GI L E F+
Sbjct: 205 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ + + +++ + +MAPE + DV+S+GI L E F+
Sbjct: 203 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ + + +++ + +MAPE + DV+S+GI L E F+
Sbjct: 187 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG+++ +L +D+ + + + PE + S+ D+++FG+++ E ++ K
Sbjct: 147 SDFGLSRYVL-DDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
E F+ T +H L ++ HL S++ V+ + C E
Sbjct: 206 PYERFTNSETAEHIAQGL------RLYRPHLASEK-------------VYTIMYSCWHEK 246
Query: 619 PEER 622
+ER
Sbjct: 247 ADER 250
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 478 KHIRHRNLIKIISSCSNDDFK--ADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREG 534
+H HRNL ND DFG+AK + + + ++ + + + APE +E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 535 RVSTNGDVYSFGIMLIETFT 554
+ DV+SFG+ L E T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 478 KHIRHRNLIKIISSCSNDDFK--ADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREG 534
+H HRNL ND DFG+AK + + + ++ + + + APE +E
Sbjct: 136 QHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY 195
Query: 535 RVSTNGDVYSFGIMLIETFT 554
+ DV+SFG+ L E T
Sbjct: 196 KFYYASDVWSFGVTLYELLT 215
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ + + +++ + +MAPE + DV+S+GI L E F+
Sbjct: 210 CDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+A+ + + +++ + +MAPE + DV+S+GI L E F+
Sbjct: 210 CDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.9 bits (76), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ ++++++ + I + APE G + DV+SFGI+L E T K
Sbjct: 152 ADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGK 209
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 146 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 556 KKPTDEI 562
+ P I
Sbjct: 206 QLPYSNI 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 166 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 225
Query: 556 KKPTDEI 562
+ P I
Sbjct: 226 QLPYSNI 232
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 33.5 bits (75), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 11/144 (7%)
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLI 162
L+ L N + S N L + AI L QS++ + S I+ P ++ L+NL
Sbjct: 78 LAPLKNLTKITELELSGNPLKNV--SAIAGL-QSIKTLDLTSTQITDVTP--LAGLSNLQ 132
Query: 163 AIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKLSGF 222
+YL N++ P+A L L+ L L NK+S
Sbjct: 133 VLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTP----LANLSKLTTLKADDNKISDI 188
Query: 223 VPASFGNLTNLRSLHLGSNQITSI 246
P +L NL +HL +NQI+ +
Sbjct: 189 SP--LASLPNLIEVHLKNNQISDV 210
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 556 KKPTDEI 562
+ P I
Sbjct: 206 QLPYSNI 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 174 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 556 KKPTDEI 562
+ P I
Sbjct: 234 QLPYSNI 240
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 33.5 bits (75), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TXXXXXXXX 257
+PD L L LDL +L P +F +L++L+ L++ N S+ +
Sbjct: 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 521
Query: 258 XXXXSSNFFTGPLPLEIGNL-KVLIKIDLSMNNFSGVIPIT--IGYLKDLQYLFLEYNRL 314
S N E+ + L ++L+ N+F+ + ++KD + L +E R+
Sbjct: 522 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 581
Query: 315 QGSIP 319
+ + P
Sbjct: 582 ECATP 586
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 148 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 207
Query: 556 KKPTDEI 562
+ P I
Sbjct: 208 QLPYSNI 214
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 33.5 bits (75), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 399 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 454
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 455 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 498
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 499 PSDRPSFAEI 508
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 279 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 327
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 146 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 191
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TXXXXXXXX 257
+PD L L LDL +L P +F +L++L+ L++ N S+ +
Sbjct: 486 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545
Query: 258 XXXXSSNFFTGPLPLEIGNL-KVLIKIDLSMNNFSGVIPIT--IGYLKDLQYLFLEYNRL 314
S N E+ + L ++L+ N+F+ + ++KD + L +E R+
Sbjct: 546 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 605
Query: 315 QGSIP 319
+ + P
Sbjct: 606 ECATP 610
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 556 KKPTDEI 562
+ P I
Sbjct: 211 QLPYSNI 217
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 146 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 205
Query: 556 KKPTDEI 562
+ P I
Sbjct: 206 QLPYSNI 212
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q ++ +MAPE R S DVYS+GI+L E T
Sbjct: 174 GDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTG 233
Query: 556 KKPTDEI 562
+ P I
Sbjct: 234 ELPYSHI 240
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 151 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 210
Query: 556 KKPTDEI 562
+ P I
Sbjct: 211 QLPYSNI 217
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 360 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 415
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 416 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 459
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 460 PSDRPSFAEI 469
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 240 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 288
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 53/130 (40%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+A L D + + T +MAPE +E + D++S GI IE K P
Sbjct: 167 ADFGVAGQLT--DXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPP 224
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
D+ P+ + ++ + K + FV +C V+S
Sbjct: 225 --------------YADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFV----KQCLVKS 266
Query: 619 PEERVNAKEI 628
PE+R A ++
Sbjct: 267 PEQRATATQL 276
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 122 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 33.1 bits (74), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 357 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 412
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 413 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 456
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 457 PSDRPSFAEI 466
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 237 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 285
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.1 bits (74), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 478 KHIRHRNLIKIISSCSNDDFK--ADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREG 534
+H HR+L ND DFG+AK + + + ++ + + + APE +E
Sbjct: 153 QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEY 212
Query: 535 RVSTNGDVYSFGIMLIETFTR 555
+ DV+SFG+ L E T
Sbjct: 213 KFYYASDVWSFGVTLYELLTH 233
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 168
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 169
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 173 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 232
Query: 556 KKPTDEI 562
+ P I
Sbjct: 233 QLPYSNI 239
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 123 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 168
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 205 RLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGSNQITSIPST 249
L L +L++ N + F +P F NLTNL L L SN+I SI T
Sbjct: 124 HLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 169
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R + S DVY+FGI+L E T
Sbjct: 174 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTG 233
Query: 556 KKPTDEI 562
+ P I
Sbjct: 234 QLPYSNI 240
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 209 LFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST 249
L ++DL +N++S P +F L +L SL L N+IT +P +
Sbjct: 58 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 98
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 209 LFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST 249
L ++DL +N++S P +F L +L SL L N+IT +P +
Sbjct: 58 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKS 98
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 53/143 (37%), Gaps = 32/143 (22%)
Query: 482 HRNL--IKIISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTN 539
HR+L I+ S S ADFG+A+ K I + APE G +
Sbjct: 301 HRDLRAANILVSASLVCKIADFGLARVGAK-----------FPIKWTAPEAINFGSFTIK 349
Query: 540 GDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599
DV+SFGI+L+E T + +P M + +
Sbjct: 350 SDVWSFGILLMEIVTYGR-------------------IPYPGMSNPEVIRALERGYRMPR 390
Query: 600 KGQCVSFVFNLAMKCTVESPEER 622
C ++N+ M+C PEER
Sbjct: 391 PENCPEELYNIMMRCWKNRPEER 413
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 556 KKPTDEI 562
+ P I
Sbjct: 222 QLPYSNI 228
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 221
Query: 556 KKPTDEI 562
+ P I
Sbjct: 222 QLPYSNI 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPE-YGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++K + D T+ YMAPE R+G S + D +S+G+++ E T P
Sbjct: 173 DFGLSKEAI--DHEKKAYSFCGTVEYMAPEVVNRQGH-SHSADWWSYGVLMFEMLTGSLP 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 158 ADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 214 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 257
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 258 PSDRPSFAEI 267
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 38 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 86
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E S + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 27/134 (20%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 166 CDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 559 TDEIFSGEMT----LKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKC 614
SG M L + VN+ P + + + S E + FV KC
Sbjct: 222 IGS-GSGSMAIFELLDYIVNEPPP-----KLPSGVFSLEFQDFV-------------NKC 262
Query: 615 TVESPEERVNAKEI 628
+++P ER + K++
Sbjct: 263 LIKNPAERADLKQL 276
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 68/189 (35%), Gaps = 2/189 (1%)
Query: 126 LPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGN-KLNGSIPIAXXXXXX 184
+P A +++ I W+HS ++G + LT L + L N +L P
Sbjct: 46 VPAASFQSCRNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGH 105
Query: 185 XXXXXXXXXXXXXSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT 244
P LAAL L L N L +F +L NL L L N+I
Sbjct: 106 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIP 165
Query: 245 SIPS-TXXXXXXXXXXXXSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKD 303
S+P N P +L L+ + L NN S + + L+
Sbjct: 166 SVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRS 225
Query: 304 LQYLFLEYN 312
LQYL L N
Sbjct: 226 LQYLRLNDN 234
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 29/134 (21%), Positives = 62/134 (46%), Gaps = 23/134 (17%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPT 559
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 148 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 560 DEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAM-----KC 614
+ E + P+++ +++D +++++ + S VF+L KC
Sbjct: 204 PPPDAKE-------DSRPPMAIFELLD-YIVNEPPP------KLPSGVFSLEFQDFVNKC 249
Query: 615 TVESPEERVNAKEI 628
+++P ER + K++
Sbjct: 250 LIKNPAERADLKQL 263
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
IP+ L L L +L+L N+L P SF LT+LR L L Q+ +I
Sbjct: 171 IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
L +L L+L N+L+ +F L+ LR L L +N I SIPS
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS 124
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 205 RLAALFQLDLGS-NKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
R+ +L +LDLG +L A+F L NLR L+LG + IP+
Sbjct: 129 RVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN 173
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.3 bits (72), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 164 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 224 YDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 32.3 bits (72), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
IP+ L L L +L+L N+L P SF LT+LR L L Q+ +I
Sbjct: 171 IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATI 217
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 205 RLAALFQLDLGS-NKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
R+ +L +LDLG +L A+F L NLR L+LG + IP+
Sbjct: 129 RVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLKDIPN 173
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
L +L L+L N+L+ +F L+ LR L L +N I SIPS
Sbjct: 82 LPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPS 124
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 32.3 bits (72), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 154 ADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 208
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 34 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 82
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593
D I + E++ + LP + +D +++ ++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 254
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 222 YDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 227 YDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 478 KHIRHRNLIKIISSCSNDDFK--ADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREG 534
+H HR L ND DFG+AK + + + ++ + + + APE +E
Sbjct: 130 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 189
Query: 535 RVSTNGDVYSFGIMLIETFT 554
+ DV+SFG+ L E T
Sbjct: 190 KFYYASDVWSFGVTLYELLT 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 223 YDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 223 YDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTR 555
DFG+A + S Q +I +MAPE R S DVY+FGI+L E T
Sbjct: 150 GDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTG 209
Query: 556 KKPTDEI 562
+ P I
Sbjct: 210 QLPYSNI 216
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 162 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 222 YDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 227 YDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 47/111 (42%), Gaps = 23/111 (20%)
Query: 202 DLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTXXXXXXXXXXXX 261
+L L L +LDL N LS P SF L +L+ L + +QI I
Sbjct: 202 NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVI--------------- 246
Query: 262 SSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312
N F NL+ L++I+L+ NN + + L L+ + L +N
Sbjct: 247 ERNAF--------DNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHN 289
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 24/134 (17%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS----------TXXXXXX 255
LA L L+L N+L+ +F L+ L+ L L +N I SIPS
Sbjct: 111 LANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL 170
Query: 256 XXXXXXSSNFFTGPLPL-----------EIGNLKVLIK---IDLSMNNFSGVIPITIGYL 301
S F G L EI NL LIK +DLS N+ S + P + L
Sbjct: 171 KRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQGL 230
Query: 302 KDLQYLFLEYNRLQ 315
LQ L++ +++Q
Sbjct: 231 MHLQKLWMIQSQIQ 244
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 151 ADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 31 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 79
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 166 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 225
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 226 YDGIPASEISSILEKGERLPQPPICTIDVYMI 257
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Query: 478 KHIRHRNLIKIISSCSNDDFK--ADFGMAKPLLK-EDQSLIQTQTLATIGYMAPEYGREG 534
+H HR L ND DFG+AK + + + ++ + + + APE +E
Sbjct: 131 QHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEC 190
Query: 535 RVSTNGDVYSFGIMLIETFT 554
+ DV+SFG+ L E T
Sbjct: 191 KFYYASDVWSFGVTLYELLT 210
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593
D I + E++ + LP + +D +++ ++
Sbjct: 223 YDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 257
>pdb|4ECO|A Chain A, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
pdb|4ECO|B Chain B, Crystal Structure Of A Hypothetical Protein (Bacegg_03329)
From Bacteroides Eggerthii Dsm 20697 At 2.70 A
Resolution
Length = 636
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS 248
L + L L+ N+L G +PA FG+ L SL+L NQIT IP+
Sbjct: 326 LQKXKKLGXLECLYNQLEGKLPA-FGSEIKLASLNLAYNQITEIPA 370
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 227 YDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 163 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 222
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 223 YDGIPASEISSILEKGERLPQPPICTIDVYMI 254
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 185 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 244
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 245 YDGIPASEISSILEKGERLPQPPICTIDVYMI 276
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 221 YDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 157 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 212
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 213 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 256
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 257 PSDRPSFAEI 266
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 37 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 85
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 170 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 229
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593
D I + E++ + LP + +D +++ ++
Sbjct: 230 YDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 264
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 158 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 214 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 257
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 258 PSDRPSFAEI 267
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 438 GGIGYVYKRRIH-YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
G G VY+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 86
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 158 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 214 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 257
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 258 PSDRPSFAEI 267
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 438 GGIGYVYKRRIH-YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
G G VY+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 29 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 86
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 151 ADFGLSR-LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 438 GGIGYVYKRRIH-YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
G G VY+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 22 GQFGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 79
>pdb|2Z7X|B Chain B, Crystal Structure Of The Tlr1-Tlr2 Heterodimer Induced By
Binding Of A Tri-Acylated Lipopeptide
Length = 520
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 198 SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSN 241
SIP + +L AL +L++ SN+L F LT+L+ + L +N
Sbjct: 435 SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTN 478
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 212 LDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
LDL SNK+ +P L L+ L++ SNQ+ S+P
Sbjct: 426 LDLHSNKIKS-IPKQVVKLEALQELNVASNQLKSVP 460
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 154 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 214 YDGIPASEISSILEKGERLPQPPICTIDVYMI 245
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 157 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 216
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 217 YDGIPASEISSILEKGERLPQPPICTIDVYMI 248
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 478 KHIRHRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEY----- 530
K I HR+L ++ + D ADFG++ LK Q + + T +MAPE
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCET 185
Query: 531 GREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLK 570
++ D++S GI LIE + P E+ + LK
Sbjct: 186 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 225
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++K + D T+ YMAPE + + D +SFG+++ E T P
Sbjct: 168 TDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 161 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 220
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 221 YDGIPASEISSILEKGERLPQPPICTIDVYMI 252
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++K + D T+ YMAPE + + D +SFG+++ E T P
Sbjct: 170 DFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 208
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 209 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 252
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 253 PSDRPSFAEI 262
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+P +L L +DL +N++S SF N+T L +L L N++ IP
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%)
Query: 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319
+P E+ N K L IDLS N S + + + L L L YNRL+ P
Sbjct: 46 VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPP 95
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 198 SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSN 241
SIP D+ L AL +L++ SN+L F LT+L+ + L N
Sbjct: 464 SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDN 507
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 207 AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
++ +L+L SNKL F LT L L L NQI S+P
Sbjct: 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP 68
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 41/103 (39%), Gaps = 8/103 (7%)
Query: 146 NISGGIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXXXXXSIPDDL-C 204
++ GIP + L L NKL S+P S+PD +
Sbjct: 21 SVPTGIPSSATRL------ELESNKLQ-SLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFD 73
Query: 205 RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
+L L L L NKL F LT L+ L L +NQ+ S+P
Sbjct: 74 KLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVP 116
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
ADFG+A+ ++++++ + I + APE G + +V+SFGI+L E T K
Sbjct: 151 ADFGLAR-VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGK 208
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG++K + D T+ YMAPE + + D +SFG+++ E T
Sbjct: 168 TDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG+AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 194 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 253
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 254 YDGIPASEISSILEKGERLPQPPICTIDVYMI 285
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 158 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 214 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 257
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 258 PSDRPSFAEI 267
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 38 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 86
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 202 DLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
D L L L L +NK+S P +F L L L+L NQ+ +P
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
+P DL AL LDL +NK++ F NL NL +L L +N+I+ I
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 471 DIECDMMKHIRHRNLIKIISSCSN----DDFK---ADFGMAKPLLKEDQSLIQTQTLATI 523
DI C M +++ RN I + N +D ADFG+++ + D + +
Sbjct: 145 DIACGM-EYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKLPV 203
Query: 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTR 555
++A E + + + DV++FG+ + E TR
Sbjct: 204 KWLALESLADNLYTVHSDVWAFGVTMWEIMTR 235
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 155 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 35 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 83
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 158 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 213
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 214 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 257
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 258 PSDRPSFAEI 267
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 38 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 86
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%)
Query: 202 DLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
D L L L L +NK+S P +F L L L+L NQ+ +P
Sbjct: 71 DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 116
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
+P DL AL LDL +NK++ F NL NL +L L +N+I+ I
Sbjct: 46 VPKDLPPDTAL--LDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 91
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 166 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 220
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 46 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 94
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 480 IRHRNL----IKIISSCSNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG 534
I HR+L + + S C K ADFG+A + E Q+ T GY++PE R+
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--GTPGYLSPEVLRKD 208
Query: 535 RVSTNGDVYSFGIML 549
D+++ G++L
Sbjct: 209 PYGKPVDIWACGVIL 223
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 155 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 209
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 35 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 83
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 478 KHIRHRNLIK--IISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEY----- 530
K I HR+L ++ + D ADFG++ LK Q + + T +MAPE
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQK--RDSFIGTPYWMAPEVVMCET 193
Query: 531 GREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLK 570
++ D++S GI LIE + P E+ + LK
Sbjct: 194 MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK 233
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 153 ADFGLSR-LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT---- 207
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 208 ---------------YGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 252
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 253 PSDRPSFAEI 262
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 33 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 81
>pdb|1G9U|A Chain A, Crystal Structure Of Yopm-leucine Rich Effector Protein
From Yersinia Pestis
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
Length = 454
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 92 YLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI 151
YL S +L L L N +LK NNSL + + +L S+E F N +
Sbjct: 135 YLGVSNNQLEKLPELQNSSFLKIIDVDNNSL-----KKLPDLPPSLE-FIAAGNNQLEEL 188
Query: 152 PEEISNLTNLIAIYLGGNKL 171
P E+ NL L AIY N L
Sbjct: 189 P-ELQNLPFLTAIYADNNSL 207
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 206 LAALFQLDLGSNKL-SGFVPASFGNLTNLRSLHLGSNQI 243
L AL +LDL N++ S ++ SFG L +L+S+ SNQI
Sbjct: 122 LKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI 160
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 206 LAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
L LF G + L F+P NL NL SLHLGSN I+SI
Sbjct: 106 LKHLFLTQTGISNLE-FIPVH--NLENLESLHLGSNHISSI 143
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 26/137 (18%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
DFG+ K + ++ ++ + + + APE + + DV+SFG+ L E T
Sbjct: 156 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 215
Query: 558 PTDEIFS----------GEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFV 607
+ G+MT+ VN L +E K C V
Sbjct: 216 SDSSPMALFLKMIGPTHGQMTVTRLVNTL---------------KEGKRLPCPPNCPDEV 260
Query: 608 FNLAMKCTVESPEERVN 624
+ L KC P R +
Sbjct: 261 YQLMRKCWEFQPSNRTS 277
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIM 548
ADFG++K + E Q L++T T GY APE R D++S GI+
Sbjct: 193 ADFGLSK--IVEHQVLMKT-VCGTPGYCAPEILRGCAYGPEVDMWSVGII 239
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 162 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593
D I + E++ + LP + +D +++ ++
Sbjct: 222 YDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 438 GGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFD-IECDMMKHIRHRNLIKIISSCSNDD 496
G +G+ +R + + + ++ LQ +A + I C + + I RN++ C
Sbjct: 109 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-VHRDIAVRNILVASPECVK-- 165
Query: 497 FKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+++ + ED L I +M+PE R +T DV+ F + + E +
Sbjct: 166 -LGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILS 221
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEY--GREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG+++ + L L +MAPE E + D YSF ++L T +
Sbjct: 171 ADFGLSQQSVHSVSGL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 557 KPTDEIFSGEM 567
P DE G++
Sbjct: 226 GPFDEYSYGKI 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFGM K + D + T Y+APE + + + D +SFG++L E + P
Sbjct: 161 ADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 162 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 222 YDGIPASEISSILEKGERLPQPPICTIDVYMI 253
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 1/95 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 162 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 221
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593
D I + E++ + LP + +D +++ ++
Sbjct: 222 YDGIPASEISSILEKGERLPQPPICTIDVYMIMRK 256
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 49/137 (35%), Gaps = 26/137 (18%)
Query: 499 ADFGMAKPL-LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKK 557
DFG+ K + ++ ++ + + + APE + + DV+SFG+ L E T
Sbjct: 168 GDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227
Query: 558 PTDEIFS----------GEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFV 607
+ G+MT+ VN L +E K C V
Sbjct: 228 SDSSPMALFLKMIGPTHGQMTVTRLVNTL---------------KEGKRLPCPPNCPDEV 272
Query: 608 FNLAMKCTVESPEERVN 624
+ L KC P R +
Sbjct: 273 YQLMRKCWEFQPSNRTS 289
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 167 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 227 YDGIPASEISSILEKGERLPQPPICTIDVYMI 258
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 151 ADFGLSR-LMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 31 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 79
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 160 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 220 YDGIPASEISSILEKGERLPQPPICTIDVYMI 251
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 153 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 212
Query: 549 LIETFTRKKPTDEIFS 564
L K P +I +
Sbjct: 213 LYYMTYGKTPFQQIIN 228
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 438 GGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFD-IECDMMKHIRHRNLIKIISSCSNDD 496
G +G+ +R + + + ++ LQ +A + I C + + I RN++ C
Sbjct: 93 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-VHRDIAVRNILVASPECVK-- 149
Query: 497 FKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+++ + ED L I +M+PE R +T DV+ F + + E +
Sbjct: 150 -LGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILS 205
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 6/118 (5%)
Query: 438 GGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFD-IECDMMKHIRHRNLIKIISSCSNDD 496
G +G+ +R + + + ++ LQ +A + I C + + I RN++ C
Sbjct: 97 GELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC-VHRDIAVRNILVASPECVK-- 153
Query: 497 FKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT 554
DFG+++ + ED L I +M+PE R +T DV+ F + + E +
Sbjct: 154 -LGDFGLSRYIEDEDYYKASVTRLP-IKWMSPESINFRRFTTASDVWMFAVCMWEILS 209
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 1/92 (1%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKP 558
DFG AK L E++ I +MA E + DV+S+G+ + E T KP
Sbjct: 164 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 223
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590
D I + E++ + LP + +D +++
Sbjct: 224 YDGIPASEISSILEKGERLPQPPICTIDVYMI 255
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 155 ADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 210
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 211 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 254
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 255 PSDRPSFAEI 264
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 35 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 83
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 20/130 (15%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFG+++ L+ D I + APE + S DV++FG++L E T
Sbjct: 154 ADFGLSR-LMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY--- 209
Query: 559 TDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVES 618
+ P + + + L ++D C V+ L C +
Sbjct: 210 ----------------GMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWN 253
Query: 619 PEERVNAKEI 628
P +R + EI
Sbjct: 254 PSDRPSFAEI 263
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 438 GGIGYVYKRRIH-YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND 495
G G VY+ Y + VAVK E + F E +MK I+H NL++++ C+ +
Sbjct: 25 GQYGEVYEGVWKKYSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCTRE 82
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 150 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 209
Query: 549 LIETFTRKKPTDEIFS 564
L K P +I +
Sbjct: 210 LYYMTYGKTPFQQIIN 225
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 149 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 208
Query: 549 LIETFTRKKPTDEIFS 564
L K P +I +
Sbjct: 209 LYYMTYGKTPFQQIIN 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 11/76 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 169 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 549 LIETFTRKKPTDEIFS 564
L K P +I +
Sbjct: 229 LYYMTYGKTPFQQIIN 244
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 24/132 (18%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG + KE + + T +MAPE T D++S GIM+IE + P
Sbjct: 183 SDFGFCAQVSKEVPK--RKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
Query: 559 TDEIFSGEMTLK--HWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTV 616
+ E L+ + D LP +V D H +S V++G +L + V
Sbjct: 241 ----YFNEPPLQAMRRIRDSLP---PRVKDLHKVSS-----VLRG-----FLDLML---V 280
Query: 617 ESPEERVNAKEI 628
P +R A+E+
Sbjct: 281 REPSQRATAQEL 292
>pdb|3V44|A Chain A, Crystal Structure Of The N-Terminal Fragment Of Zebrafish
Tlr5
Length = 407
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 209 LFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247
L QL L N+++ +F LT+L+ L L +NQ+ S+P
Sbjct: 301 LEQLTLAQNEINKIDDNAFWGLTHLKELALDTNQLKSVP 339
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3REZ|A Chain A, Glycoprotein Gpib Variant
pdb|3REZ|B Chain B, Glycoprotein Gpib Variant
pdb|3REZ|C Chain C, Glycoprotein Gpib Variant
pdb|3REZ|D Chain D, Glycoprotein Gpib Variant
Length = 129
Score = 30.4 bits (67), Expect = 3.2, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSN 241
+L L N L+ P +F +L LR+ HLG+N
Sbjct: 34 ELVLTGNNLTSVPPGAFDHLPQLRTAHLGAN 64
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 48/172 (27%)
Query: 90 DNYLTSSTPKLNF---------------LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS 134
DN +T TP N +S+++ + +K ++ + + P A LS
Sbjct: 78 DNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLA--GLS 135
Query: 135 QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIAXXXXXXXXXXXXXXXX 194
++++ ++ I+ P ++ LTNL + +G N++N P+A
Sbjct: 136 -NLQVLYLDLNQITNISP--LAGLTNLQYLSIGNNQVNDLTPLA---------------- 176
Query: 195 XXXSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI 246
L+ L L NK+S P +L NL +HL NQI+ +
Sbjct: 177 ----------NLSKLTTLRADDNKISDISP--LASLPNLIEVHLKDNQISDV 216
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLI 162
+S L+ L+Y S NN ++ + P A NLS+ + IS P +++L NLI
Sbjct: 150 ISPLAGLTNLQYLSIGNNQVNDLTPLA--NLSK-LTTLRADDNKISDISP--LASLPNLI 204
Query: 163 AIYLGGNKLNGSIPIA 178
++L N+++ P+A
Sbjct: 205 EVHLKDNQISDVSPLA 220
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 197 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 549 LIETFTRKKPTDEIF 563
L K P +I
Sbjct: 257 LYYMTYGKTPFQQII 271
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 248
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 249 NPSARITIPDI 259
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 109 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 167
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 168 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 227
Query: 550 IE 551
+
Sbjct: 228 YQ 229
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + S+++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 197 DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 256
Query: 549 LIETFTRKKPTDEIF 563
L K P +I
Sbjct: 257 LYYMTYGKTPFQQII 271
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 165
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 550 IE 551
+
Sbjct: 226 YQ 227
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Query: 443 VYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCS 493
V+K+ Y + VAVK E + F E +MK I+H NL++++ C+
Sbjct: 52 VWKK---YSLTVAVKTLKEDTMEV-EEFLKEAAVMKEIKHPNLVQLLGVCT 98
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.4 bits (67), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
+DFG + K+ + + T +MAPE +T D++S GIM+IE + P
Sbjct: 183 SDFGFCAQISKDVPK--RKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 435 IDRGGIGYV-YKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISS 491
I G G V R H G +VAVK+ DL+ ++ + E +M+ +H N++++ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKS 110
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
ADFGM K + D T Y+APE + + + D +SFG++L E + P
Sbjct: 160 ADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 248
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 249 NPSARITIPDI 259
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 107 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 165
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 166 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 225
Query: 550 IE 551
+
Sbjct: 226 YQ 227
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 162
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 550 IE 551
+
Sbjct: 223 YQ 224
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 493 SNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLI 550
D+ K +DFG+A ++ + + T+ Y+APE + DV+S GI+L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 551 ETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
+ P D+ W ++ K +D+ L+
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEY--GREGRVSTNGDVYSFGIMLIETFTRK 556
ADFG ++ + L L +MAPE E + D YSF ++L T +
Sbjct: 171 ADFGTSQQSVHSVSGL-----LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGE 225
Query: 557 KPTDEIFSGEM 567
P DE G++
Sbjct: 226 GPFDEYSYGKI 236
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 106 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 164
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 165 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 224
Query: 550 IE 551
+
Sbjct: 225 YQ 226
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 162
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 550 IE 551
+
Sbjct: 223 YQ 224
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 145 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
P D+ W ++ K +D+ L+
Sbjct: 205 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 238
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 162
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 550 IE 551
+
Sbjct: 223 YQ 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 493 SNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLI 550
D+ K +DFG+A ++ + + T+ Y+APE + DV+S GI+L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 551 ETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
+ P D+ W ++ K +D+ L+
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 84 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 142
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 143 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 202
Query: 550 IE 551
+
Sbjct: 203 YQ 204
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 493 SNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLI 550
D+ K +DFG+A ++ + + T+ Y+APE + DV+S GI+L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 551 ETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
+ P D+ W ++ K +D+ L+
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 493 SNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLI 550
D+ K +DFG+A ++ + + T+ Y+APE + DV+S GI+L
Sbjct: 140 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 199
Query: 551 ETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
+ P D+ W ++ K +D+ L+
Sbjct: 200 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 104 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 162
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 163 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 222
Query: 550 IE 551
+
Sbjct: 223 YQ 224
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/101 (22%), Positives = 42/101 (41%), Gaps = 2/101 (1%)
Query: 493 SNDDFK-ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLI 550
D+ K +DFG+A ++ + + T+ Y+APE + DV+S GI+L
Sbjct: 139 ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLT 198
Query: 551 ETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
+ P D+ W ++ K +D+ L+
Sbjct: 199 AMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 30.0 bits (66), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
P D+ W ++ K +D+ L+
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 239
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 111 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 169
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 170 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 229
Query: 550 IE 551
+
Sbjct: 230 YQ 231
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 81 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 139
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 140 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 199
Query: 550 IE 551
+
Sbjct: 200 YQ 201
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 83 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 141
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 142 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 201
Query: 550 IE 551
+
Sbjct: 202 YQ 203
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
P D+ W ++ K +D+ L+
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591
P D+ W ++ K +D+ L+
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA 240
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 88 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 146
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 147 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 206
Query: 550 IE 551
+
Sbjct: 207 YQ 208
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 140
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 141 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 200
Query: 550 IE 551
+
Sbjct: 201 YQ 202
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 161
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 550 IE 551
+
Sbjct: 222 YQ 223
>pdb|3F6K|A Chain A, Crystal Structure Of The Vps10p Domain Of Human
SortilinNTS3 IN Complex With Neurotensin
Length = 685
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 489 ISSCSNDDFKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG 540
I CS +DF DFG +P + D ++ L YGRE ++TNG
Sbjct: 588 ICLCSLEDFLCDFGYYRP--ENDSKCVEQPELKGHDLEFCLYGREEHLTTNG 637
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIE 551
DFG+A+ +L D S +T + T YM+PE + D++S G +L E
Sbjct: 158 GDFGLAR-ILNHDTSFAKT-FVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYE 208
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 50/122 (40%), Gaps = 18/122 (14%)
Query: 447 RIHYGMEVAVKVFDLQYREAFKNFDIECDMM--------------KHIRHRNLIKIISSC 492
++++G+ A L+Y +FD C K I HR+L K +
Sbjct: 103 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL-KPENIL 161
Query: 493 SNDDFK---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIML 549
N+D DFG AK L E + + T Y++PE E + D+++ G ++
Sbjct: 162 LNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCII 221
Query: 550 IE 551
+
Sbjct: 222 YQ 223
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 147 CDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 559 TDEIFSGEMTL 569
+ E+ L
Sbjct: 203 IPPPDAKELEL 213
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 147 CDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 559 TDEIFSGEMTL 569
+ E+ L
Sbjct: 203 IPPPDAKELEL 213
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 29.6 bits (65), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YMAPE + S D++S G+ L+E + P
Sbjct: 158 DFGVSGQLIDS----MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 147 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 207 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 248
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 249 NPSARITIPDI 259
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 19/131 (14%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNG-DVYSFGIMLIETFTRKK 557
+DFG+A ++ + + T+ Y+APE + DV+S GI+L +
Sbjct: 146 SDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 558 PTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVE 617
P D+ W ++ K +D+ L+ L K VE
Sbjct: 206 PWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLA------------------LLHKILVE 247
Query: 618 SPEERVNAKEI 628
+P R+ +I
Sbjct: 248 NPSARITIPDI 258
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 429 FSENNLIDRGGIGYVYK-RRIHYGMEVAVKVFD 460
F NL+ +G VY+ IH G+EVA+K+ D
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMID 45
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 147 CDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 559 TDEIFSGEMTL 569
+ E+ L
Sbjct: 203 IPPPDAKELEL 213
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKP 558
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 147 CDFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 559 TDEIFSGEMTL 569
+ E+ L
Sbjct: 203 IPPPDAKELEL 213
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPT 559
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 210 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Query: 560 DEIFSGEMTL 569
+ E+ L
Sbjct: 266 PPPDAKELEL 275
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 29.3 bits (64), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPT 559
DFG++ L+ + + T YM+PE + S D++S G+ L+E + P
Sbjct: 175 DFGVSGQLIDS----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Query: 560 DEIFSGEMTL 569
+ E+ L
Sbjct: 231 PPPDAKELEL 240
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 437 RGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISS 491
RG G V+K ++ VAVK+F +Q +++++N + E + ++H N+++ I +
Sbjct: 34 RGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGA 86
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 435 IDRGGIGYVYKRR-IHYGMEVA---VKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIIS 490
I RG VY+ + G+ VA V++FDL +A + E D++K + H N+IK +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 491 SCSNDD 496
S D+
Sbjct: 100 SFIEDN 105
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 28.9 bits (63), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 11/76 (14%)
Query: 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNG----------DVYSFGIM 548
DFG+A + + +++ + T+ YM PE ++ S NG DV+S G +
Sbjct: 169 DFGIANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCI 228
Query: 549 LIETFTRKKPTDEIFS 564
L K P +I +
Sbjct: 229 LYYMTYGKTPFQQIIN 244
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 4/125 (3%)
Query: 199 IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TXXXXXXXX 257
+PD L L LDL +L P +F +L++L+ L++ N S+ +
Sbjct: 167 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 226
Query: 258 XXXXSSNFFTGPLPLEIGNL-KVLIKIDLSMNNFSGVIPIT--IGYLKDLQYLFLEYNRL 314
S N E+ + L ++L+ N+F+ + ++KD + L +E R+
Sbjct: 227 VLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 286
Query: 315 QGSIP 319
+ + P
Sbjct: 287 ECATP 291
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,950,393
Number of Sequences: 62578
Number of extensions: 599014
Number of successful extensions: 2405
Number of sequences better than 100.0: 485
Number of HSP's better than 100.0 without gapping: 232
Number of HSP's successfully gapped in prelim test: 253
Number of HSP's that attempted gapping in prelim test: 1539
Number of HSP's gapped (non-prelim): 848
length of query: 628
length of database: 14,973,337
effective HSP length: 105
effective length of query: 523
effective length of database: 8,402,647
effective search space: 4394584381
effective search space used: 4394584381
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (25.4 bits)