Query 037488
Match_columns 628
No_of_seqs 616 out of 4168
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 22:12:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037488.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037488hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 5.2E-49 1.8E-53 445.0 32.0 389 1-398 274-749 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.3E-46 4.5E-51 425.3 30.1 385 1-390 228-721 (768)
3 4eco_A Uncharacterized protein 100.0 6.1E-44 2.1E-48 394.4 26.1 378 1-387 86-601 (636)
4 3t6q_A CD180 antigen; protein- 100.0 2.6E-42 9E-47 381.3 37.7 357 1-364 38-463 (606)
5 3vq2_A TLR4, TOLL-like recepto 100.0 1.5E-42 5.1E-47 383.3 31.2 382 1-389 37-561 (606)
6 3t6q_A CD180 antigen; protein- 100.0 2.1E-42 7.2E-47 382.1 32.0 360 1-367 62-517 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 1.3E-42 4.6E-47 396.6 28.6 382 1-390 29-564 (844)
8 4ecn_A Leucine-rich repeat pro 100.0 1.5E-41 5.1E-46 381.3 30.0 354 1-368 328-823 (876)
9 2z63_A TOLL-like receptor 4, v 100.0 2.1E-41 7.2E-46 371.5 29.6 382 1-390 33-535 (570)
10 4eco_A Uncharacterized protein 100.0 6.6E-42 2.3E-46 378.1 24.3 347 5-365 192-602 (636)
11 1ziw_A TOLL-like receptor 3; i 100.0 3.2E-40 1.1E-44 369.6 34.7 389 1-390 176-626 (680)
12 1ziw_A TOLL-like receptor 3; i 100.0 1.9E-39 6.4E-44 363.4 39.1 361 1-366 30-446 (680)
13 3vq2_A TLR4, TOLL-like recepto 100.0 1.6E-40 5.3E-45 367.2 26.6 364 1-368 61-563 (606)
14 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-40 7.5E-45 361.6 23.9 372 1-389 31-513 (549)
15 3v47_A TOLL-like receptor 5B a 100.0 6.9E-40 2.4E-44 349.0 26.8 366 2-375 16-420 (455)
16 4ecn_A Leucine-rich repeat pro 100.0 4.1E-40 1.4E-44 369.6 24.2 348 4-366 433-843 (876)
17 2z7x_B TOLL-like receptor 1, v 100.0 2.4E-39 8.2E-44 350.8 28.1 365 1-387 5-482 (520)
18 2z63_A TOLL-like receptor 4, v 100.0 1.6E-39 5.6E-44 356.4 26.8 359 1-370 57-538 (570)
19 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.5E-38 5.1E-43 347.5 30.5 350 1-367 36-514 (562)
20 3v47_A TOLL-like receptor 5B a 100.0 9.3E-39 3.2E-43 340.3 26.4 353 33-391 30-413 (455)
21 2z81_A CD282 antigen, TOLL-lik 100.0 1.3E-38 4.4E-43 347.6 27.9 367 2-386 11-486 (549)
22 3j0a_A TOLL-like receptor 5; m 100.0 3.7E-38 1.3E-42 359.9 30.0 375 2-385 10-538 (844)
23 2id5_A Lingo-1, leucine rich r 100.0 1.8E-38 6.1E-43 340.1 25.3 304 34-367 33-337 (477)
24 4g8a_A TOLL-like receptor 4; l 100.0 4E-37 1.4E-41 342.0 34.3 383 1-388 57-582 (635)
25 2z7x_B TOLL-like receptor 1, v 100.0 1.5E-37 5.1E-42 336.7 27.3 347 23-386 3-457 (520)
26 2id5_A Lingo-1, leucine rich r 100.0 5.9E-37 2E-41 328.2 27.0 306 2-340 17-334 (477)
27 1o6v_A Internalin A; bacterial 100.0 4.2E-36 1.4E-40 320.2 33.1 331 1-365 51-390 (466)
28 3o6n_A APL1; leucine-rich repe 100.0 1.3E-35 4.4E-40 309.2 27.6 313 30-365 42-354 (390)
29 1o6v_A Internalin A; bacterial 100.0 2.2E-35 7.6E-40 314.6 29.2 337 17-386 43-388 (466)
30 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.7E-35 5.9E-40 323.2 28.4 353 18-388 29-512 (562)
31 3oja_B Anopheles plasmodium-re 100.0 2E-35 6.7E-40 324.6 27.4 336 30-389 48-383 (597)
32 4fmz_A Internalin; leucine ric 100.0 1E-34 3.4E-39 297.6 30.0 305 31-363 42-346 (347)
33 4asz_A BDNF/NT-3 growth factor 100.0 1.7E-37 5.8E-42 307.2 6.4 182 427-628 13-280 (299)
34 4aoj_A High affinity nerve gro 100.0 3.2E-37 1.1E-41 309.6 7.8 182 427-628 41-310 (329)
35 4gt4_A Tyrosine-protein kinase 100.0 4.6E-37 1.6E-41 305.4 7.7 181 428-628 27-297 (308)
36 4g8a_A TOLL-like receptor 4; l 100.0 1.6E-34 5.6E-39 320.9 28.7 363 1-367 81-584 (635)
37 3omv_A RAF proto-oncogene seri 100.0 1.2E-36 4.3E-41 300.8 9.6 186 426-628 35-291 (307)
38 3bz5_A Internalin-J, INLJ; leu 100.0 2E-34 6.8E-39 304.8 26.3 323 8-368 30-392 (457)
39 1jl5_A Outer protein YOPM; leu 100.0 4.1E-34 1.4E-38 302.2 26.8 283 35-368 93-377 (454)
40 4fih_A Serine/threonine-protei 100.0 1.5E-36 5.3E-41 303.8 7.4 182 427-628 74-321 (346)
41 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.3E-36 7.9E-41 298.0 7.7 181 427-628 32-282 (311)
42 4fmz_A Internalin; leucine ric 100.0 1.2E-33 4.2E-38 289.5 27.0 299 15-339 39-346 (347)
43 4b9d_A Serine/threonine-protei 100.0 3.5E-36 1.2E-40 301.8 5.0 181 426-628 23-274 (350)
44 3bz5_A Internalin-J, INLJ; leu 100.0 6.2E-33 2.1E-37 293.4 28.6 299 31-364 40-353 (457)
45 3o6n_A APL1; leucine-rich repe 100.0 2.6E-33 8.8E-38 291.8 24.7 312 55-388 43-354 (390)
46 2ft3_A Biglycan; proteoglycan, 100.0 7.2E-33 2.4E-37 281.7 26.9 287 34-337 34-331 (332)
47 3hyh_A Carbon catabolite-derep 100.0 1.3E-35 4.5E-40 288.7 6.2 179 426-628 12-260 (275)
48 4fie_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 303.7 6.9 183 426-628 150-398 (423)
49 1jl5_A Outer protein YOPM; leu 100.0 1E-32 3.5E-37 291.5 27.8 331 1-387 16-371 (454)
50 1xku_A Decorin; proteoglycan, 100.0 3.2E-32 1.1E-36 276.8 29.8 288 34-337 32-330 (330)
51 3fpq_A Serine/threonine-protei 100.0 1E-34 3.6E-39 285.0 10.6 176 430-628 29-280 (290)
52 1ogq_A PGIP-2, polygalacturona 100.0 2.3E-33 7.8E-38 282.4 19.3 252 137-390 52-308 (313)
53 4g3f_A NF-kappa-beta-inducing 100.0 7.4E-35 2.5E-39 290.9 8.0 178 427-627 58-306 (336)
54 3oja_B Anopheles plasmodium-re 100.0 7.7E-33 2.6E-37 304.0 24.7 312 55-388 49-360 (597)
55 4ase_A Vascular endothelial gr 100.0 7.2E-35 2.5E-39 294.8 7.6 188 422-628 59-338 (353)
56 1xku_A Decorin; proteoglycan, 100.0 6.1E-32 2.1E-36 274.7 28.0 287 58-360 32-329 (330)
57 2ft3_A Biglycan; proteoglycan, 100.0 3.2E-32 1.1E-36 276.9 25.6 287 58-361 34-331 (332)
58 3ubd_A Ribosomal protein S6 ki 100.0 1.3E-34 4.6E-39 285.5 3.7 177 427-626 24-272 (304)
59 1ogq_A PGIP-2, polygalacturona 100.0 9.4E-33 3.2E-37 277.9 16.3 250 110-363 50-304 (313)
60 3hmm_A TGF-beta receptor type- 100.0 2.6E-33 8.9E-38 279.2 11.0 191 427-628 3-288 (303)
61 4g31_A Eukaryotic translation 100.0 3.7E-33 1.3E-37 276.6 6.0 180 427-628 5-277 (299)
62 4b99_A Mitogen-activated prote 100.0 2.7E-32 9.1E-37 280.9 9.1 202 426-628 53-342 (398)
63 3uto_A Twitchin; kinase, muscl 100.0 7.6E-32 2.6E-36 291.4 8.8 183 426-628 156-408 (573)
64 1z7x_W Ribonuclease inhibitor; 100.0 2.6E-33 8.9E-38 298.7 -4.4 331 33-364 28-412 (461)
65 4f9c_A Cell division cycle 7-r 100.0 6.9E-31 2.4E-35 267.5 10.0 137 424-562 18-250 (361)
66 1z7x_W Ribonuclease inhibitor; 100.0 1.2E-32 3.9E-37 293.7 -3.4 362 1-364 8-441 (461)
67 2z80_A TOLL-like receptor 2, v 100.0 1.2E-29 4E-34 260.3 15.9 280 55-367 29-318 (353)
68 2z66_A Variable lymphocyte rec 100.0 4.9E-29 1.7E-33 250.4 20.0 249 60-340 10-262 (306)
69 2z66_A Variable lymphocyte rec 100.0 2.4E-29 8.3E-34 252.7 17.4 249 36-316 10-262 (306)
70 3zyj_A Leucine-rich repeat-con 100.0 4.3E-28 1.5E-32 256.3 25.1 214 151-366 80-295 (440)
71 2z80_A TOLL-like receptor 2, v 100.0 2.3E-29 7.8E-34 258.2 14.9 279 32-343 30-318 (353)
72 3zyi_A Leucine-rich repeat-con 100.0 6E-28 2E-32 256.1 26.2 230 136-367 76-307 (452)
73 3zyi_A Leucine-rich repeat-con 100.0 4.2E-28 1.4E-32 257.3 24.7 246 84-339 57-303 (452)
74 3zyj_A Leucine-rich repeat-con 100.0 8.5E-28 2.9E-32 254.0 26.2 249 81-339 43-292 (440)
75 4fcg_A Uncharacterized protein 100.0 2.7E-28 9.2E-33 246.8 20.2 195 152-363 120-314 (328)
76 3oja_A Leucine-rich immune mol 100.0 5.9E-30 2E-34 273.0 8.3 224 126-363 22-250 (487)
77 4fcg_A Uncharacterized protein 100.0 2.9E-28 9.8E-33 246.6 19.4 207 158-369 80-296 (328)
78 2qkw_B Protein kinase; three-h 100.0 1.6E-29 5.4E-34 255.8 10.1 206 417-628 29-306 (321)
79 3g06_A SSPH2 (leucine-rich rep 100.0 4.5E-27 1.5E-31 255.7 29.2 269 33-350 40-308 (622)
80 1ozn_A Reticulon 4 receptor; N 100.0 8.6E-28 3E-32 238.7 21.1 209 159-367 32-242 (285)
81 3v5w_A G-protein coupled recep 100.0 2.4E-29 8.1E-34 269.7 10.3 178 426-625 188-439 (689)
82 3o53_A Protein LRIM1, AGAP0063 100.0 4.7E-30 1.6E-34 258.9 3.6 275 23-343 3-280 (317)
83 1ozn_A Reticulon 4 receptor; N 100.0 1.9E-27 6.5E-32 236.2 19.7 232 136-368 33-266 (285)
84 3o53_A Protein LRIM1, AGAP0063 100.0 3.1E-29 1.1E-33 252.8 6.6 236 32-286 33-270 (317)
85 3fxz_A Serine/threonine-protei 100.0 7.9E-29 2.7E-33 247.5 9.1 183 426-628 19-267 (297)
86 1wwl_A Monocyte differentiatio 100.0 3.5E-29 1.2E-33 251.9 6.0 248 106-364 39-310 (312)
87 1wwl_A Monocyte differentiatio 100.0 1.1E-28 3.6E-33 248.4 9.4 249 31-291 41-309 (312)
88 3h4j_B AMPK kdaid, SNF1-like p 99.9 1.7E-28 5.8E-33 248.6 10.1 179 426-628 8-256 (336)
89 3fe3_A MAP/microtubule affinit 99.9 5.9E-29 2E-33 251.5 6.6 180 425-628 13-262 (328)
90 3g06_A SSPH2 (leucine-rich rep 99.9 5.1E-26 1.8E-30 247.4 30.0 263 57-368 40-302 (622)
91 2yab_A Death-associated protei 99.9 1.7E-28 5.9E-33 251.1 8.8 183 426-628 11-270 (361)
92 3uim_A Brassinosteroid insensi 99.9 2.8E-28 9.6E-33 247.3 9.8 209 413-628 16-302 (326)
93 2bdw_A Hypothetical protein K1 99.9 2.1E-28 7E-33 251.3 8.7 182 426-627 28-281 (362)
94 2c30_A Serine/threonine-protei 99.9 3.1E-28 1.1E-32 246.0 8.5 194 415-628 23-292 (321)
95 3soa_A Calcium/calmodulin-depe 99.9 3.3E-28 1.1E-32 255.6 8.7 185 425-628 9-265 (444)
96 3zgw_A Maternal embryonic leuc 99.9 1.5E-28 5.3E-33 249.9 5.7 182 425-628 8-258 (347)
97 3tki_A Serine/threonine-protei 99.9 4.6E-28 1.6E-32 244.9 8.9 185 426-628 6-259 (323)
98 1kob_A Twitchin; kinase, intra 99.9 4.4E-28 1.5E-32 250.3 8.9 183 426-628 50-302 (387)
99 3oja_A Leucine-rich immune mol 99.9 1.1E-27 3.7E-32 255.6 11.5 235 33-310 34-270 (487)
100 3niz_A Rhodanese family protei 99.9 9.2E-28 3.2E-32 241.5 10.4 200 426-628 20-298 (311)
101 1tki_A Titin; serine kinase, m 99.9 3.7E-28 1.3E-32 245.2 7.4 182 426-628 4-255 (321)
102 3s95_A LIMK-1, LIM domain kina 99.9 3.6E-28 1.2E-32 244.6 7.3 185 426-628 9-273 (310)
103 3c0i_A Peripheral plasma membr 99.9 3.4E-28 1.2E-32 248.8 7.1 183 426-628 23-284 (351)
104 2x4f_A Myosin light chain kina 99.9 7E-28 2.4E-32 248.2 9.2 179 430-628 92-340 (373)
105 2y0a_A Death-associated protei 99.9 5.5E-28 1.9E-32 244.8 7.9 183 426-628 10-269 (326)
106 3dbq_A Dual specificity protei 99.9 4.9E-28 1.7E-32 247.1 7.6 185 426-628 8-271 (343)
107 3soc_A Activin receptor type-2 99.9 5.4E-28 1.8E-32 244.5 7.8 193 425-628 22-309 (322)
108 2zmd_A Dual specificity protei 99.9 6.3E-28 2.2E-32 250.2 8.1 184 427-628 56-318 (390)
109 3ttj_A Mitogen-activated prote 99.9 1.7E-27 5.9E-32 252.2 11.5 200 425-628 60-353 (464)
110 3o0g_A Cell division protein k 99.9 2.4E-27 8.2E-32 236.4 11.4 200 427-628 2-280 (292)
111 2nru_A Interleukin-1 receptor- 99.9 6.6E-27 2.3E-31 235.1 13.7 206 413-628 11-297 (307)
112 3p86_A Serine/threonine-protei 99.9 1.4E-27 4.7E-32 239.8 8.0 182 425-628 35-289 (309)
113 1o6l_A RAC-beta serine/threoni 99.9 1.5E-27 5E-32 241.9 8.2 175 426-623 4-248 (337)
114 2psq_A Fibroblast growth facto 99.9 2.6E-27 8.9E-32 243.9 10.0 183 426-628 80-355 (370)
115 2w4o_A Calcium/calmodulin-depe 99.9 9.5E-28 3.3E-32 245.2 6.6 183 425-628 51-303 (349)
116 1ob3_A PFPK5, cell division co 99.9 2E-27 6.8E-32 236.5 8.3 199 427-628 2-278 (288)
117 3cbl_A C-FES, proto-oncogene t 99.9 4.5E-28 1.5E-32 250.6 3.7 183 426-628 113-365 (377)
118 2pmi_A Negative RE, cyclin-dep 99.9 5E-27 1.7E-31 236.9 11.2 201 425-628 3-291 (317)
119 3kk8_A Calcium/calmodulin depe 99.9 3.8E-27 1.3E-31 234.0 9.5 183 426-628 5-259 (284)
120 3i6u_A CDS1, serine/threonine- 99.9 1.9E-27 6.3E-32 249.2 7.4 185 425-628 133-397 (419)
121 3kn6_A Ribosomal protein S6 ki 99.9 6.7E-27 2.3E-31 236.6 11.2 180 432-628 16-268 (325)
122 3oz6_A Mitogen-activated prote 99.9 1.6E-27 5.3E-32 247.8 6.6 138 425-562 7-234 (388)
123 4euu_A Serine/threonine-protei 99.9 6.6E-27 2.3E-31 236.3 10.8 200 426-628 8-300 (319)
124 1u5q_A Serine/threonine protei 99.9 3.4E-27 1.2E-31 240.8 8.6 178 426-628 53-303 (348)
125 3poz_A Epidermal growth factor 99.9 1.2E-27 4.1E-32 242.5 5.2 183 426-628 14-269 (327)
126 1xjd_A Protein kinase C, theta 99.9 4.3E-27 1.5E-31 239.1 9.3 182 424-628 14-267 (345)
127 2eue_A Carbon catabolite derep 99.9 1.8E-27 6.3E-32 235.1 6.3 179 426-628 12-260 (275)
128 4fr4_A YANK1, serine/threonine 99.9 8.7E-27 3E-31 239.8 11.4 178 426-624 14-264 (384)
129 4f0f_A Serine/threonine-protei 99.9 6.9E-27 2.4E-31 232.5 10.0 181 426-628 18-280 (287)
130 2z62_A TOLL-like receptor 4, v 99.9 1.8E-25 6.3E-30 220.7 20.0 210 159-369 28-243 (276)
131 3l9p_A Anaplastic lymphoma kin 99.9 2E-27 7E-32 244.6 6.1 183 426-628 70-336 (367)
132 3lb7_A RAF proto-oncogene seri 99.9 4.1E-27 1.4E-31 236.2 8.0 186 426-628 35-291 (307)
133 3mwu_A Calmodulin-domain prote 99.9 4E-27 1.4E-31 252.0 8.3 182 426-628 21-274 (486)
134 2zv2_A Calcium/calmodulin-depe 99.9 4E-27 1.4E-31 235.6 7.6 182 426-628 12-290 (298)
135 4dc2_A Protein kinase C IOTA t 99.9 5.6E-27 1.9E-31 242.0 9.0 183 426-626 51-308 (396)
136 3rp9_A Mitogen-activated prote 99.9 5.5E-27 1.9E-31 249.1 9.2 130 426-555 52-280 (458)
137 1qcf_A Haematopoetic cell kina 99.9 2.1E-27 7E-32 251.7 5.8 182 425-628 186-435 (454)
138 2qr7_A Ribosomal protein S6 ki 99.9 1.5E-27 5.1E-32 242.7 3.9 184 425-628 20-275 (342)
139 3f3z_A Calcium/calmodulin-depe 99.9 4.7E-27 1.6E-31 232.4 7.4 181 426-627 8-258 (277)
140 3kul_A Ephrin type-A receptor 99.9 4.5E-27 1.5E-31 238.0 7.2 183 426-628 48-304 (325)
141 3uc3_A Serine/threonine-protei 99.9 7.3E-27 2.5E-31 239.7 8.8 185 425-628 18-272 (361)
142 4eqm_A Protein kinase; transfe 99.9 4.2E-27 1.4E-31 234.7 6.7 182 426-624 10-261 (294)
143 2yex_A Serine/threonine-protei 99.9 1.6E-26 5.5E-31 228.4 10.8 185 426-628 6-259 (276)
144 3vhe_A Vascular endothelial gr 99.9 5.2E-27 1.8E-31 241.4 7.5 189 421-628 16-346 (359)
145 3txo_A PKC-L, NPKC-ETA, protei 99.9 5.2E-27 1.8E-31 239.5 7.3 178 425-625 21-269 (353)
146 2a2a_A Death-associated protei 99.9 6.8E-27 2.3E-31 236.5 8.1 183 426-628 11-270 (321)
147 3ugc_A Tyrosine-protein kinase 99.9 3.6E-27 1.2E-31 235.5 5.9 194 426-628 9-282 (295)
148 3n9x_A Phosphotransferase; mal 99.9 7.8E-27 2.7E-31 245.6 8.6 136 425-560 24-253 (432)
149 3nyv_A Calmodulin-domain prote 99.9 2.9E-27 9.8E-32 253.2 5.4 182 426-628 25-279 (484)
150 3a8x_A Protein kinase C IOTA t 99.9 1.9E-26 6.4E-31 234.9 11.1 183 426-626 8-265 (345)
151 2y94_A 5'-AMP-activated protei 99.9 6.7E-27 2.3E-31 247.2 7.9 179 426-628 15-264 (476)
152 3dls_A PAS domain-containing s 99.9 2.6E-27 9E-32 240.5 4.5 173 426-628 23-272 (335)
153 3og7_A AKAP9-BRAF fusion prote 99.9 1.2E-26 4E-31 231.0 9.0 186 426-628 23-279 (289)
154 3g33_A Cell division protein k 99.9 8.9E-27 3E-31 234.2 8.2 200 425-628 7-294 (308)
155 1cm8_A Phosphorylated MAP kina 99.9 7.4E-27 2.5E-31 240.2 7.8 197 426-628 24-305 (367)
156 3lij_A Calcium/calmodulin depe 99.9 6.4E-27 2.2E-31 250.8 7.6 182 426-628 36-289 (494)
157 3ork_A Serine/threonine protei 99.9 4E-27 1.4E-31 237.0 5.5 185 426-627 11-270 (311)
158 3v8s_A RHO-associated protein 99.9 1.9E-27 6.6E-32 246.9 3.2 190 421-628 63-327 (410)
159 1fot_A TPK1 delta, CAMP-depend 99.9 7.8E-27 2.7E-31 234.9 7.4 173 426-624 5-247 (318)
160 2xrw_A Mitogen-activated prote 99.9 2.1E-26 7.3E-31 237.5 10.8 198 426-628 24-316 (371)
161 3mtl_A Cell division protein k 99.9 4.6E-27 1.6E-31 237.9 5.7 198 427-628 2-279 (324)
162 1p9a_G Platelet glycoprotein I 99.9 1.2E-24 4E-29 215.9 22.7 207 154-366 5-211 (290)
163 2o6q_A Variable lymphocyte rec 99.9 2E-24 6.9E-29 212.4 24.2 205 160-367 17-222 (270)
164 2fst_X Mitogen-activated prote 99.9 1.1E-26 3.8E-31 238.7 8.2 198 425-628 27-309 (367)
165 3q5i_A Protein kinase; CDPK, m 99.9 1.2E-26 4.2E-31 249.2 8.9 183 425-628 34-299 (504)
166 3cok_A Serine/threonine-protei 99.9 1.6E-26 5.4E-31 228.7 8.9 180 426-628 10-260 (278)
167 3gni_B Strad alpha; kinase fol 99.9 1.5E-26 5.1E-31 240.5 9.1 203 425-628 23-331 (389)
168 3hko_A Calcium/calmodulin-depe 99.9 1.3E-26 4.3E-31 237.1 8.2 189 423-628 22-328 (345)
169 2jam_A Calcium/calmodulin-depe 99.9 9.7E-27 3.3E-31 233.5 7.1 183 425-628 7-259 (304)
170 2z62_A TOLL-like receptor 4, v 99.9 7E-25 2.4E-29 216.5 20.4 205 136-341 29-239 (276)
171 1k9a_A Carboxyl-terminal SRC k 99.9 1.1E-26 3.9E-31 245.5 8.0 176 425-628 191-436 (450)
172 4hcu_A Tyrosine-protein kinase 99.9 1E-26 3.5E-31 228.9 7.1 181 426-628 9-257 (269)
173 2eva_A TAK1 kinase - TAB1 chim 99.9 1.7E-26 5.9E-31 231.8 8.8 177 426-628 7-254 (307)
174 2qol_A Ephrin receptor; recept 99.9 6.2E-27 2.1E-31 241.2 5.7 183 426-628 44-300 (373)
175 1j1b_A Glycogen synthase kinas 99.9 8.9E-27 3.1E-31 244.1 6.9 193 426-627 53-333 (420)
176 4aaa_A Cyclin-dependent kinase 99.9 2.4E-26 8.2E-31 233.5 9.5 200 425-628 23-304 (331)
177 3p1a_A MYT1 kinase, membrane-a 99.9 1.6E-26 5.5E-31 232.4 8.0 176 427-628 57-302 (311)
178 3sxs_A Cytoplasmic tyrosine-pr 99.9 1.1E-26 3.6E-31 228.7 6.4 181 426-628 7-255 (268)
179 3bhy_A Death-associated protei 99.9 1.6E-26 5.4E-31 229.4 7.6 182 427-628 5-263 (283)
180 1ua2_A CAK, cell division prot 99.9 1.7E-26 5.8E-31 236.0 8.1 203 423-628 6-289 (346)
181 1opk_A P150, C-ABL, proto-onco 99.9 1.2E-26 4.1E-31 248.2 7.2 181 426-628 219-469 (495)
182 3q4u_A Activin receptor type-1 99.9 5.2E-26 1.8E-30 227.8 11.4 190 426-628 7-293 (301)
183 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1E-26 3.4E-31 235.9 6.2 204 422-628 29-316 (329)
184 1rdq_E PKA C-alpha, CAMP-depen 99.9 1.3E-26 4.3E-31 236.5 7.0 173 426-624 40-282 (350)
185 3lzb_A Epidermal growth factor 99.9 1E-26 3.6E-31 235.4 6.3 183 426-628 14-269 (327)
186 4aw2_A Serine/threonine-protei 99.9 8.5E-27 2.9E-31 243.9 5.7 192 419-627 66-335 (437)
187 3a62_A Ribosomal protein S6 ki 99.9 1.8E-26 6.3E-31 233.6 8.0 178 426-626 16-267 (327)
188 4agu_A Cyclin-dependent kinase 99.9 2.6E-26 9E-31 231.1 9.0 198 427-628 3-282 (311)
189 3cek_A Dual specificity protei 99.9 8.2E-27 2.8E-31 235.0 5.2 194 417-628 18-290 (313)
190 3qup_A Tyrosine-protein kinase 99.9 1.6E-26 5.6E-31 234.0 7.3 184 424-627 20-288 (323)
191 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 1.2E-26 4.2E-31 245.4 6.7 182 425-628 182-431 (452)
192 3c4z_A Rhodopsin kinase; Ser/T 99.9 3.5E-26 1.2E-30 244.4 10.2 182 426-626 184-439 (543)
193 2rku_A Serine/threonine-protei 99.9 3.3E-26 1.1E-30 228.4 9.4 180 426-628 14-263 (294)
194 2i0e_A Protein kinase C-beta I 99.9 2.9E-26 1E-30 233.8 8.9 178 425-625 18-266 (353)
195 3fdn_A Serine/threonine-protei 99.9 1.8E-26 6E-31 228.5 7.1 179 425-628 7-255 (279)
196 3eb0_A Putative uncharacterize 99.9 2.8E-26 9.5E-31 237.8 8.7 196 424-628 4-319 (383)
197 3nsz_A CK II alpha, casein kin 99.9 2.6E-26 8.8E-31 233.2 8.1 197 426-628 35-317 (330)
198 2owb_A Serine/threonine-protei 99.9 3.2E-26 1.1E-30 232.8 8.8 181 425-628 39-289 (335)
199 3kex_A Receptor tyrosine-prote 99.9 5.5E-27 1.9E-31 237.5 3.0 183 426-628 12-267 (325)
200 1t46_A HOMO sapiens V-KIT hard 99.9 3.4E-26 1.2E-30 230.5 8.5 184 426-628 22-298 (313)
201 3dtc_A Mitogen-activated prote 99.9 1.8E-26 6.3E-31 227.4 6.4 179 426-628 6-264 (271)
202 4eut_A Serine/threonine-protei 99.9 3.9E-26 1.3E-30 237.6 9.2 199 426-627 8-299 (396)
203 3qyz_A Mitogen-activated prote 99.9 4.5E-26 1.5E-30 234.6 9.5 204 424-628 24-311 (364)
204 2ac3_A MAP kinase-interacting 99.9 1.3E-26 4.4E-31 234.0 5.3 200 427-628 12-293 (316)
205 2h34_A Serine/threonine-protei 99.9 3.7E-26 1.3E-30 229.6 8.6 184 425-627 32-286 (309)
206 2clq_A Mitogen-activated prote 99.9 3.6E-26 1.2E-30 228.2 8.5 181 428-628 23-276 (295)
207 2r5t_A Serine/threonine-protei 99.9 3.3E-26 1.1E-30 235.0 8.4 178 426-626 37-285 (373)
208 3tt0_A Basic fibroblast growth 99.9 2.5E-26 8.6E-31 238.0 7.5 183 426-628 68-343 (382)
209 1mp8_A Focal adhesion kinase 1 99.9 2E-26 6.9E-31 228.3 6.4 183 425-628 13-267 (281)
210 3qd2_B Eukaryotic translation 99.9 1.4E-26 4.7E-31 235.5 5.3 181 426-628 5-323 (332)
211 2ivs_A Proto-oncogene tyrosine 99.9 3.9E-26 1.3E-30 230.2 8.5 184 425-628 21-302 (314)
212 1luf_A Muscle-specific tyrosin 99.9 3E-26 1E-30 234.1 7.7 186 423-628 43-326 (343)
213 3is5_A Calcium-dependent prote 99.9 1.8E-26 6.1E-31 229.2 5.8 180 427-628 22-276 (285)
214 2y7j_A Phosphorylase B kinase 99.9 3.8E-26 1.3E-30 234.8 8.4 186 423-628 90-357 (365)
215 1p9a_G Platelet glycoprotein I 99.9 2.9E-24 9.9E-29 213.1 21.6 200 32-267 9-208 (290)
216 4exu_A Mitogen-activated prote 99.9 2.9E-26 9.9E-31 236.5 7.4 197 426-628 41-321 (371)
217 1nxk_A MAP kinase-activated pr 99.9 4.2E-26 1.5E-30 237.2 8.6 179 427-628 61-319 (400)
218 1rjb_A FL cytokine receptor; k 99.9 3.3E-26 1.1E-30 233.9 7.5 185 425-628 43-325 (344)
219 2acx_A G protein-coupled recep 99.9 2.1E-26 7.3E-31 246.6 6.1 181 425-625 182-434 (576)
220 2i1m_A Macrophage colony-stimu 99.9 5.8E-26 2E-30 230.9 8.9 185 425-628 44-317 (333)
221 3gen_A Tyrosine-protein kinase 99.9 2.9E-26 9.8E-31 227.5 6.1 182 425-628 22-271 (283)
222 2wtk_C Serine/threonine-protei 99.9 5.4E-26 1.8E-30 228.1 8.1 182 426-628 4-261 (305)
223 2ycf_A Serine/threonine-protei 99.9 2.3E-26 7.9E-31 232.7 5.4 184 426-628 9-272 (322)
224 3kvw_A DYRK2, dual specificity 99.9 6.9E-26 2.4E-30 237.9 9.1 131 426-562 96-302 (429)
225 2xir_A Vascular endothelial gr 99.9 4.8E-26 1.7E-30 229.7 7.6 187 423-628 23-301 (316)
226 2izr_A Casein kinase I isoform 99.9 1.6E-26 5.5E-31 234.7 4.1 187 426-628 8-272 (330)
227 3pg1_A Mitogen-activated prote 99.9 4.6E-26 1.6E-30 234.5 7.5 207 418-628 13-314 (362)
228 2vd5_A DMPK protein; serine/th 99.9 2.1E-26 7.1E-31 239.3 5.0 192 418-627 52-324 (412)
229 4ejn_A RAC-alpha serine/threon 99.9 1.2E-26 4.2E-31 245.4 3.2 175 426-623 147-392 (446)
230 3lm5_A Serine/threonine-protei 99.9 3.7E-26 1.3E-30 231.5 6.6 192 417-628 18-285 (327)
231 2wqm_A Serine/threonine-protei 99.9 7.8E-26 2.7E-30 227.5 8.8 184 426-628 31-288 (310)
232 3cc6_A Protein tyrosine kinase 99.9 7.7E-26 2.6E-30 224.1 8.4 183 425-628 10-264 (281)
233 3mi9_A Cell division protein k 99.9 8.9E-26 3E-30 231.3 9.0 202 426-628 16-309 (351)
234 2o6q_A Variable lymphocyte rec 99.9 7.1E-24 2.4E-28 208.4 22.3 202 34-268 17-219 (270)
235 3llt_A Serine/threonine kinase 99.9 6.3E-26 2.2E-30 233.3 7.8 141 415-561 23-261 (360)
236 1u59_A Tyrosine-protein kinase 99.9 1E-25 3.4E-30 224.0 9.0 183 426-628 8-263 (287)
237 3lxl_A Tyrosine-protein kinase 99.9 3.3E-26 1.1E-30 232.0 5.6 197 426-628 22-294 (327)
238 3a7i_A MST3 kinase, serine/thr 99.9 6.9E-26 2.4E-30 227.1 7.8 181 426-628 21-268 (303)
239 2j7t_A Serine/threonine-protei 99.9 4.7E-26 1.6E-30 228.3 6.1 184 425-628 17-273 (302)
240 1phk_A Phosphorylase kinase; g 99.9 1.3E-25 4.5E-30 224.5 9.3 184 425-628 15-281 (298)
241 2vgo_A Serine/threonine-protei 99.9 8.4E-26 2.9E-30 224.3 7.8 178 426-628 13-260 (284)
242 2h8h_A Proto-oncogene tyrosine 99.9 3.6E-26 1.2E-30 246.7 5.4 182 425-628 265-514 (535)
243 2b9h_A MAP kinase FUS3, mitoge 99.9 8.3E-26 2.8E-30 231.8 7.8 203 425-628 9-303 (353)
244 3fme_A Dual specificity mitoge 99.9 1.1E-25 3.7E-30 224.1 8.5 183 425-628 5-264 (290)
245 2i6l_A Mitogen-activated prote 99.9 8.9E-26 3E-30 228.2 7.9 201 426-628 10-303 (320)
246 2ozo_A Tyrosine-protein kinase 99.9 5.2E-26 1.8E-30 249.0 6.7 175 434-628 343-589 (613)
247 3ogk_B Coronatine-insensitive 99.9 1.7E-27 5.7E-32 262.2 -5.3 341 18-363 110-526 (592)
248 1p4o_A Insulin-like growth fac 99.9 7.9E-26 2.7E-30 228.8 7.4 185 424-628 22-290 (322)
249 4e7w_A Glycogen synthase kinas 99.9 7E-26 2.4E-30 235.3 7.0 194 426-627 39-318 (394)
250 3brb_A Proto-oncogene tyrosine 99.9 9E-26 3.1E-30 227.4 7.6 185 424-628 31-299 (313)
251 3c1x_A Hepatocyte growth facto 99.9 7E-26 2.4E-30 233.1 6.9 181 428-628 90-346 (373)
252 3kfa_A Tyrosine-protein kinase 99.9 1.1E-25 3.8E-30 223.9 7.8 183 424-628 10-262 (288)
253 3kmu_A ILK, integrin-linked ki 99.9 8E-26 2.7E-30 222.7 6.7 176 426-628 9-261 (271)
254 3aln_A Dual specificity mitoge 99.9 2.3E-25 7.8E-30 225.9 10.1 185 426-628 21-283 (327)
255 2buj_A Serine/threonine-protei 99.9 6.6E-26 2.3E-30 228.8 6.0 185 426-628 28-297 (317)
256 2pvf_A Fibroblast growth facto 99.9 7.2E-26 2.5E-30 230.2 6.3 183 426-628 34-309 (334)
257 3byv_A Rhoptry kinase; malaria 99.9 2.4E-26 8.1E-31 237.8 2.7 172 426-628 72-357 (377)
258 3coi_A Mitogen-activated prote 99.9 1.2E-25 4.3E-30 230.4 7.9 197 426-628 23-303 (353)
259 1qpc_A LCK kinase; alpha beta 99.9 6.7E-26 2.3E-30 224.4 5.6 182 425-628 11-260 (279)
260 2yfx_A Tyrosine-protein kinase 99.9 5.7E-26 2E-30 230.3 5.3 183 426-628 29-295 (327)
261 3e3p_A Protein kinase, putativ 99.9 1.7E-25 5.7E-30 230.2 8.8 203 421-628 17-312 (360)
262 2wei_A Calmodulin-domain prote 99.9 8.3E-26 2.9E-30 224.6 6.3 182 426-628 21-274 (287)
263 3t9t_A Tyrosine-protein kinase 99.9 9.5E-26 3.2E-30 221.7 6.7 181 426-628 7-255 (267)
264 4fvq_A Tyrosine-protein kinase 99.9 4.1E-26 1.4E-30 227.1 4.1 175 426-628 7-266 (289)
265 2r3i_A Cell division protein k 99.9 1.6E-25 5.6E-30 223.9 8.4 199 427-628 3-281 (299)
266 2h6d_A 5'-AMP-activated protei 99.9 9.8E-26 3.3E-30 222.8 6.7 179 426-628 10-259 (276)
267 3lxp_A Non-receptor tyrosine-p 99.9 6.7E-26 2.3E-30 228.8 5.5 193 429-628 33-301 (318)
268 1csn_A Casein kinase-1; phosph 99.9 1.2E-25 4.2E-30 224.7 7.1 186 426-628 9-274 (298)
269 3pls_A Macrophage-stimulating 99.9 2.8E-25 9.5E-30 222.1 9.7 182 428-628 22-278 (298)
270 3gxj_A TGF-beta receptor type- 99.9 3.8E-26 1.3E-30 229.0 3.4 190 426-628 2-288 (303)
271 3op5_A Serine/threonine-protei 99.9 7E-26 2.4E-30 233.1 5.3 194 425-628 33-320 (364)
272 4e5w_A Tyrosine-protein kinase 99.9 9.3E-26 3.2E-30 226.1 5.9 193 427-628 21-293 (302)
273 1t4h_A Serine/threonine-protei 99.9 4.9E-25 1.7E-29 219.4 11.0 178 428-628 27-280 (290)
274 3com_A Serine/threonine-protei 99.9 2.1E-25 7.2E-30 224.8 8.3 182 425-628 27-276 (314)
275 3an0_A Dual specificity mitoge 99.9 1.4E-25 4.9E-30 228.7 7.1 184 424-628 48-308 (340)
276 3rfs_A Internalin B, repeat mo 99.9 2.8E-24 9.5E-29 211.6 15.9 161 157-347 83-243 (272)
277 4fl3_A Tyrosine-protein kinase 99.9 1.3E-25 4.4E-30 246.5 6.9 176 433-628 375-622 (635)
278 3eqc_A Dual specificity mitoge 99.9 1.3E-25 4.4E-30 230.9 6.5 132 426-561 32-232 (360)
279 1byg_A CSK, protein (C-termina 99.9 1.8E-25 6.2E-30 221.1 7.1 175 426-628 20-264 (278)
280 3ll6_A Cyclin G-associated kin 99.9 2.2E-25 7.7E-30 227.0 7.7 180 426-628 27-299 (337)
281 2v62_A Serine/threonine-protei 99.9 1.1E-25 3.6E-30 230.0 4.8 193 426-628 36-319 (345)
282 3f66_A Hepatocyte growth facto 99.9 4.5E-25 1.5E-29 220.6 9.0 183 426-628 24-282 (298)
283 1blx_A Cyclin-dependent kinase 99.9 2.9E-25 1E-29 225.0 7.6 201 424-628 8-294 (326)
284 1xbb_A Tyrosine-protein kinase 99.9 1.8E-25 6.2E-30 222.7 5.9 183 426-628 15-270 (291)
285 2w5a_A Serine/threonine-protei 99.9 1.4E-25 4.7E-30 222.1 4.9 181 426-628 5-265 (279)
286 2w1i_A JAK2; chromosomal rearr 99.9 2.3E-25 7.7E-30 225.8 6.6 195 426-628 40-313 (326)
287 1u46_A ACK-1, activated CDC42 99.9 1.7E-25 5.8E-30 222.9 5.2 184 426-628 17-275 (291)
288 3mdy_A Bone morphogenetic prot 99.9 1.8E-24 6.3E-29 220.2 13.0 193 423-628 33-322 (337)
289 2vwi_A Serine/threonine-protei 99.9 9.7E-26 3.3E-30 226.0 3.4 195 423-628 11-285 (303)
290 3pfq_A PKC-B, PKC-beta, protei 99.9 3.5E-25 1.2E-29 244.7 8.1 178 425-625 339-587 (674)
291 3rfs_A Internalin B, repeat mo 99.9 1.3E-23 4.6E-28 206.7 18.4 218 139-369 23-241 (272)
292 2xwt_C Thyrotropin receptor; s 99.9 7.9E-24 2.7E-28 204.2 16.4 196 160-360 32-236 (239)
293 1b6c_B TGF-B superfamily recep 99.9 1.9E-24 6.5E-29 220.6 12.6 194 422-628 37-327 (342)
294 1mqb_A Ephrin type-A receptor 99.9 4.5E-25 1.5E-29 224.1 7.6 183 426-628 43-300 (333)
295 4hgt_A Casein kinase I isoform 99.9 2.2E-25 7.6E-30 222.6 5.3 188 424-628 6-271 (296)
296 3uzp_A CKI-delta, CKID, casein 99.9 2.2E-25 7.6E-30 222.6 5.0 187 425-628 7-271 (296)
297 3rgf_A Cyclin-dependent kinase 99.9 5.4E-25 1.9E-29 229.9 8.2 133 428-562 21-239 (405)
298 1vzo_A Ribosomal protein S6 ki 99.9 1.2E-25 4.1E-30 230.3 3.0 181 426-624 53-310 (355)
299 3p23_A Serine/threonine-protei 99.9 4.7E-25 1.6E-29 231.3 7.0 182 426-628 23-281 (432)
300 2rio_A Serine/threonine-protei 99.9 9.3E-25 3.2E-29 229.8 9.1 182 428-628 16-293 (434)
301 3qa8_A MGC80376 protein; kinas 99.9 1.6E-24 5.6E-29 234.3 11.1 196 426-628 13-295 (676)
302 2jii_A Serine/threonine-protei 99.9 2.6E-25 9E-30 227.8 4.4 188 426-628 41-327 (352)
303 2dyl_A Dual specificity mitoge 99.9 8.6E-25 2.9E-29 220.8 8.0 183 426-628 24-281 (318)
304 1wak_A Serine/threonine-protei 99.9 1.3E-24 4.4E-29 226.7 9.5 197 426-628 36-389 (397)
305 3q60_A ROP5B; pseudokinase, tr 99.9 6.8E-25 2.3E-29 226.4 7.2 186 426-628 61-350 (371)
306 2pml_X PFPK7, Ser/Thr protein 99.9 1.6E-24 5.3E-29 221.8 9.4 194 426-628 30-320 (348)
307 3g2f_A Bone morphogenetic prot 99.9 6.3E-25 2.2E-29 223.6 6.3 201 426-628 12-309 (336)
308 1x8b_A WEE1HU, WEE1-like prote 99.9 6.8E-25 2.3E-29 218.1 6.2 174 426-628 10-277 (289)
309 2xwt_C Thyrotropin receptor; s 99.9 2E-23 6.7E-28 201.4 15.8 195 58-263 32-235 (239)
310 2x7f_A TRAF2 and NCK-interacti 99.9 3E-25 1E-29 225.0 3.2 186 421-628 18-284 (326)
311 2vx3_A Dual specificity tyrosi 99.9 9.3E-25 3.2E-29 226.2 6.9 132 425-562 52-261 (382)
312 1q8y_A SR protein kinase; tran 99.9 8.6E-25 3E-29 226.0 6.6 197 426-628 18-331 (373)
313 1fvr_A Tyrosine-protein kinase 99.9 6.9E-25 2.4E-29 222.3 5.5 179 427-628 25-291 (327)
314 2j0j_A Focal adhesion kinase 1 99.9 9.2E-25 3.1E-29 240.6 6.4 183 425-628 388-642 (656)
315 3a99_A Proto-oncogene serine/t 99.9 3.6E-25 1.2E-29 223.6 2.8 175 423-628 39-291 (320)
316 2a19_B Interferon-induced, dou 99.9 4.5E-25 1.5E-29 218.9 3.0 171 426-628 10-265 (284)
317 3ogk_B Coronatine-insensitive 99.9 4.4E-25 1.5E-29 242.8 1.7 358 1-360 117-548 (592)
318 1zy4_A Serine/threonine-protei 99.9 1.8E-24 6.2E-29 216.7 5.9 183 426-628 5-281 (303)
319 4glp_A Monocyte differentiatio 99.9 3.2E-23 1.1E-27 208.2 15.0 228 110-363 64-307 (310)
320 1z57_A Dual specificity protei 99.9 4.4E-24 1.5E-28 217.5 8.3 195 426-628 13-326 (339)
321 2iwi_A Serine/threonine-protei 99.9 9.3E-25 3.2E-29 219.9 3.2 174 424-628 28-281 (312)
322 3sv0_A Casein kinase I-like; t 99.9 1.8E-24 6E-29 229.1 4.8 188 426-628 6-269 (483)
323 3fhr_A MAP kinase-activated pr 99.9 2.9E-24 9.8E-29 218.4 6.1 183 425-628 26-285 (336)
324 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 4.3E-29 223.5 3.5 256 38-315 3-297 (362)
325 1h6u_A Internalin H; cell adhe 99.9 1.2E-22 4.1E-27 203.5 17.1 195 155-364 37-231 (308)
326 4glp_A Monocyte differentiatio 99.9 3.1E-23 1.1E-27 208.2 12.3 222 160-385 65-306 (310)
327 3m19_A Variable lymphocyte rec 99.9 6.1E-22 2.1E-26 192.4 20.6 177 160-339 15-192 (251)
328 2eu9_A Dual specificity protei 99.9 1E-23 3.5E-28 216.3 8.5 195 426-628 18-331 (355)
329 3e7e_A HBUB1, BUB1A, mitotic c 99.9 2.2E-23 7.4E-28 214.7 9.6 173 425-625 63-326 (365)
330 3m19_A Variable lymphocyte rec 99.9 1.1E-21 3.7E-26 190.6 20.7 179 184-365 15-194 (251)
331 2ca6_A RAN GTPase-activating p 99.9 2E-24 6.9E-29 224.2 0.8 138 154-291 89-257 (386)
332 2y4i_B KSR2, HKSR2, kinase sup 99.9 8.1E-24 2.8E-28 213.7 5.1 183 425-628 31-293 (319)
333 1h6u_A Internalin H; cell adhe 99.9 4E-22 1.4E-26 199.7 17.1 192 32-268 40-231 (308)
334 4ay9_X Follicle-stimulating ho 99.9 8.8E-22 3E-26 201.1 19.2 240 60-335 12-255 (350)
335 3goz_A Leucine-rich repeat-con 99.9 4.5E-24 1.5E-28 219.3 1.7 212 154-365 45-299 (362)
336 4ay9_X Follicle-stimulating ho 99.9 5.6E-22 1.9E-26 202.6 17.2 240 36-312 12-256 (350)
337 3dzo_A Rhoptry kinase domain; 99.9 2.2E-23 7.5E-28 217.8 5.6 171 426-627 77-360 (413)
338 2p1m_B Transport inhibitor res 99.9 8.5E-25 2.9E-29 240.7 -6.4 126 16-145 101-245 (594)
339 2ast_B S-phase kinase-associat 99.9 2.7E-23 9.4E-28 211.4 5.2 250 111-368 48-311 (336)
340 2ca6_A RAN GTPase-activating p 99.9 7.3E-24 2.5E-28 219.9 -0.1 242 104-366 26-319 (386)
341 2ast_B S-phase kinase-associat 99.9 7.4E-23 2.5E-27 208.2 5.8 198 35-241 49-257 (336)
342 2pzi_A Probable serine/threoni 99.9 1.3E-22 4.4E-27 225.7 8.1 167 426-626 79-316 (681)
343 3uqc_A Probable conserved tran 99.9 5.8E-22 2E-26 196.2 8.9 181 426-628 30-256 (286)
344 2p1m_B Transport inhibitor res 99.8 5.4E-23 1.8E-27 226.3 0.0 344 15-363 61-494 (594)
345 2o6s_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 174.2 15.2 157 160-323 29-186 (208)
346 3cvr_A Invasion plasmid antige 99.8 6.4E-20 2.2E-24 197.1 18.5 167 159-349 80-253 (571)
347 2o6s_A Variable lymphocyte rec 99.8 4.4E-20 1.5E-24 173.8 15.1 149 163-314 11-160 (208)
348 3cvr_A Invasion plasmid antige 99.8 1.1E-19 3.8E-24 195.2 19.3 182 160-368 60-248 (571)
349 3m2w_A MAP kinase-activated pr 99.8 7.8E-21 2.7E-25 189.8 7.6 184 427-628 17-254 (299)
350 1h6t_A Internalin B; cell adhe 99.8 1.2E-19 4.2E-24 179.9 15.2 170 157-363 44-213 (291)
351 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-19 5.6E-24 171.1 14.1 154 211-367 15-170 (220)
352 2xot_A Amphoterin-induced prot 99.8 2.3E-19 8E-24 183.9 16.1 178 162-365 21-204 (361)
353 2v9t_B SLIT homolog 2 protein 99.8 7.4E-19 2.5E-23 166.6 17.3 150 162-314 14-164 (220)
354 1h6t_A Internalin B; cell adhe 99.8 2E-19 6.9E-24 178.3 13.8 189 111-315 25-213 (291)
355 2v9t_B SLIT homolog 2 protein 99.8 1.1E-18 3.6E-23 165.5 17.3 134 232-365 33-167 (220)
356 1m9s_A Internalin B; cell inva 99.8 2.3E-19 7.9E-24 194.9 13.2 173 156-341 40-212 (605)
357 2xot_A Amphoterin-induced prot 99.8 4.2E-19 1.4E-23 182.0 14.4 155 137-291 41-202 (361)
358 1m9s_A Internalin B; cell inva 99.8 6.1E-19 2.1E-23 191.6 16.1 192 160-366 22-213 (605)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 1.4E-18 4.9E-23 164.6 16.7 131 210-340 35-167 (220)
360 3e6j_A Variable lymphocyte rec 99.8 3.4E-18 1.1E-22 163.2 17.5 133 183-316 40-173 (229)
361 3e6j_A Variable lymphocyte rec 99.8 6.1E-18 2.1E-22 161.4 17.7 154 186-366 22-175 (229)
362 1dce_A Protein (RAB geranylger 99.8 1E-20 3.5E-25 204.4 -4.4 216 107-356 346-566 (567)
363 2vuw_A Serine/threonine-protei 99.8 3E-20 1E-24 188.9 -0.9 171 426-618 19-323 (336)
364 1xeu_A Internalin C; cellular 99.8 6.4E-19 2.2E-23 171.9 8.5 169 158-340 18-186 (263)
365 1dce_A Protein (RAB geranylger 99.8 2.4E-20 8.1E-25 201.5 -2.8 191 156-368 346-551 (567)
366 1w8a_A SLIT protein; signaling 99.7 4.7E-18 1.6E-22 157.4 12.2 132 234-367 11-143 (192)
367 4ezg_A Putative uncharacterize 99.7 4.9E-18 1.7E-22 158.2 12.1 153 180-363 41-194 (197)
368 1xeu_A Internalin C; cellular 99.7 2.6E-18 9E-23 167.5 10.7 171 181-365 17-187 (263)
369 4b8c_D Glucose-repressible alc 99.7 1.1E-18 3.7E-23 194.5 5.5 196 81-312 173-369 (727)
370 4ezg_A Putative uncharacterize 99.7 3.2E-17 1.1E-21 152.6 12.9 152 156-315 41-194 (197)
371 4b8c_D Glucose-repressible alc 99.7 2.8E-18 9.4E-23 191.2 4.4 189 165-363 207-404 (727)
372 3sb4_A Hypothetical leucine ri 99.7 3.1E-17 1E-21 165.9 11.5 272 19-309 24-328 (329)
373 2wfh_A SLIT homolog 2 protein 99.7 4.6E-16 1.6E-20 143.9 15.0 130 234-366 13-142 (193)
374 4fdw_A Leucine rich hypothetic 99.7 2.3E-15 7.9E-20 155.4 21.8 262 34-338 114-382 (401)
375 2o6r_A Variable lymphocyte rec 99.7 6E-16 2.1E-20 141.3 14.5 133 233-367 9-141 (177)
376 3sb4_A Hypothetical leucine ri 99.7 3.2E-16 1.1E-20 158.4 13.2 259 80-356 24-327 (329)
377 1w8a_A SLIT protein; signaling 99.7 6.6E-16 2.3E-20 142.9 14.2 129 210-341 11-141 (192)
378 2ell_A Acidic leucine-rich nuc 99.7 3.7E-16 1.3E-20 141.4 11.8 131 208-339 25-160 (168)
379 4fdw_A Leucine rich hypothetic 99.7 7.5E-15 2.6E-19 151.6 22.4 266 55-363 111-383 (401)
380 2wfh_A SLIT homolog 2 protein 99.6 1.8E-15 6.1E-20 139.9 14.7 128 210-340 13-140 (193)
381 2ell_A Acidic leucine-rich nuc 99.6 6.7E-16 2.3E-20 139.6 11.5 133 230-364 23-161 (168)
382 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.7E-20 135.2 10.6 126 231-358 17-148 (149)
383 2je0_A Acidic leucine-rich nuc 99.6 6.6E-16 2.3E-20 136.7 9.0 127 207-334 17-148 (149)
384 2o6r_A Variable lymphocyte rec 99.6 1.2E-14 4.2E-19 132.5 14.8 110 232-341 29-139 (177)
385 1a9n_A U2A', U2A'; complex (nu 99.6 3.7E-15 1.3E-19 135.8 9.5 132 228-363 16-153 (176)
386 1a9n_A U2A', U2A'; complex (nu 99.6 3.5E-15 1.2E-19 136.0 7.5 109 155-267 15-126 (176)
387 4fs7_A Uncharacterized protein 99.5 7E-13 2.4E-17 137.4 23.2 307 32-360 70-376 (394)
388 1ds9_A Outer arm dynein; leuci 99.5 6.7E-17 2.3E-21 150.5 -8.0 152 182-363 17-185 (198)
389 3g39_A Variable lymphocyte rec 99.5 1.3E-13 4.3E-18 124.7 12.9 106 233-340 11-116 (170)
390 1ds9_A Outer arm dynein; leuci 99.5 1.5E-16 5.2E-21 148.1 -7.9 120 244-368 38-158 (198)
391 2r9u_A Variable lymphocyte rec 99.5 2.5E-13 8.5E-18 123.1 13.0 105 234-340 15-119 (174)
392 3g39_A Variable lymphocyte rec 99.5 3.6E-13 1.2E-17 121.6 12.3 109 256-367 11-119 (170)
393 4fs7_A Uncharacterized protein 99.5 3.9E-12 1.3E-16 131.8 21.2 295 44-360 58-353 (394)
394 2r9u_A Variable lymphocyte rec 99.4 9.4E-13 3.2E-17 119.3 12.3 108 257-367 15-122 (174)
395 4gt6_A Cell surface protein; l 99.4 4.4E-11 1.5E-15 123.8 22.5 108 250-361 261-368 (394)
396 4gt6_A Cell surface protein; l 99.3 4.4E-10 1.5E-14 116.2 24.3 321 8-362 51-390 (394)
397 4azs_A Methyltransferase WBDD; 99.3 1.7E-13 5.9E-18 147.9 -1.6 123 434-559 241-438 (569)
398 2ifg_A High affinity nerve gro 99.2 1.7E-11 5.7E-16 124.7 10.7 101 237-339 14-116 (347)
399 2ifg_A High affinity nerve gro 99.2 3.7E-11 1.3E-15 122.2 11.5 103 163-267 12-116 (347)
400 3en9_A Glycoprotease, O-sialog 99.2 3E-12 1E-16 137.4 3.1 130 430-560 339-539 (540)
401 3un9_A NLR family member X1; l 99.2 1.9E-13 6.5E-18 139.7 -6.9 172 159-349 72-262 (372)
402 4h09_A Hypothetical leucine ri 99.2 8.4E-09 2.9E-13 106.0 25.6 296 33-359 46-342 (379)
403 3un9_A NLR family member X1; l 99.1 2.9E-12 1E-16 130.8 -1.3 109 160-268 127-253 (372)
404 4h09_A Hypothetical leucine ri 99.0 2.3E-08 8E-13 102.7 22.5 269 51-360 40-320 (379)
405 2ra8_A Uncharacterized protein 98.7 2E-09 6.7E-14 108.9 1.2 84 276-361 250-341 (362)
406 2ra8_A Uncharacterized protein 98.7 5E-09 1.7E-13 106.0 2.6 136 227-364 168-321 (362)
407 1zar_A RIO2 kinase; serine kin 98.6 1.8E-08 6E-13 98.7 5.0 72 417-488 80-169 (282)
408 3rw6_A Nuclear RNA export fact 98.3 1.4E-07 4.7E-12 90.4 0.8 39 253-291 169-209 (267)
409 1io0_A Tropomodulin; LRR prote 98.2 1.8E-07 6.1E-12 85.2 1.1 113 154-266 31-163 (185)
410 1io0_A Tropomodulin; LRR prote 98.2 2.3E-07 7.7E-12 84.5 0.3 16 347-362 148-163 (185)
411 3rw6_A Nuclear RNA export fact 98.2 5.5E-07 1.9E-11 86.2 2.2 78 181-260 168-257 (267)
412 3e4g_A ATP synthase subunit S, 97.5 4.5E-05 1.5E-09 67.5 3.8 83 279-361 62-150 (176)
413 3e4g_A ATP synthase subunit S, 97.4 3.9E-05 1.3E-09 67.9 1.7 34 160-193 62-95 (176)
414 1zth_A RIO1 serine protein kin 97.3 0.00014 4.9E-09 69.7 4.8 59 427-485 47-132 (258)
415 3rfe_A Platelet glycoprotein I 96.9 0.0018 6.1E-08 54.5 6.9 54 235-290 12-67 (130)
416 3rfe_A Platelet glycoprotein I 96.8 0.0019 6.4E-08 54.3 6.0 55 37-93 12-67 (130)
417 4gyi_A RIO2 kinase; protein ki 96.8 0.00046 1.6E-08 69.5 2.6 43 418-460 86-128 (397)
418 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0018 6.2E-08 58.3 2.9 62 301-362 97-169 (197)
419 1pgv_A TMD-1, tropomodulin TMD 96.3 0.0011 3.9E-08 59.7 1.5 84 157-240 39-135 (197)
420 3d1u_A Putative fructosamine-3 93.3 0.086 2.9E-06 51.0 5.4 62 430-491 18-82 (288)
421 3tm0_A Aminoglycoside 3'-phosp 91.3 0.29 1E-05 46.2 6.4 70 424-494 11-81 (263)
422 3cxl_A N-chimerin; SH2, RHO-GA 87.4 0.069 2.4E-06 55.5 -1.5 59 432-493 147-214 (463)
423 1nd4_A Aminoglycoside 3'-phosp 85.6 0.74 2.5E-05 43.2 4.8 65 428-495 21-87 (264)
424 3f7w_A Putative fructosamine-3 83.4 0.98 3.3E-05 43.3 4.6 54 428-481 16-69 (288)
425 2lz0_A Uncharacterized protein 74.1 3.4 0.00012 32.2 4.2 47 44-91 7-53 (100)
426 2olc_A MTR kinase, methylthior 60.6 7.8 0.00027 38.8 4.9 61 432-492 35-106 (397)
427 3dxp_A Putative acyl-COA dehyd 59.1 7.8 0.00027 38.2 4.5 65 430-495 41-110 (359)
428 2lz0_A Uncharacterized protein 58.1 14 0.00048 28.7 4.8 49 66-120 5-53 (100)
429 3jr1_A Putative fructosamine-3 36.4 70 0.0024 30.6 7.0 61 430-494 39-102 (312)
430 3r70_A Aminoglycoside phosphot 29.1 70 0.0024 30.5 5.7 49 428-482 38-86 (320)
431 2yle_A Protein spire homolog 1 24.1 36 0.0012 30.7 2.3 52 524-576 102-153 (229)
432 3ovc_A Hygromycin-B 4-O-kinase 22.0 1.8E+02 0.006 28.4 7.2 60 429-494 43-104 (362)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=5.2e-49 Score=444.96 Aligned_cols=389 Identities=35% Similarity=0.564 Sum_probs=325.1
Q ss_pred CcccCCCcccCCChhccCC-CCCCEEecCccC-----------CCCCCEEEccCCcceecCCcc-ccCCCCCCEEeccCC
Q 037488 1 MAFSFNKLVGVVPTTIFNV-STLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSF-IFNASKLSRLELQMN 67 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l-~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~L~~N 67 (628)
|+|++|.+++.+|..+.+. ++|++|++++|+ +++|++|+|++|.+++.+|.. |.++++|++|++++|
T Consensus 274 L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n 353 (768)
T 3rgz_A 274 LSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353 (768)
T ss_dssp EECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSS
T ss_pred EECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCC
Confidence 5788888888888887775 889999988885 467888999999888777765 888888999999988
Q ss_pred cccccCccccCCCC-CCCEEEccCccccCCCCCCcccccccC--CCCCcEEEcccCCCCCCCchHHhccccccceeeccC
Q 037488 68 SFYGFIPNTFGNLR-NLNRLGLNDNYLTSSTPKLNFLSSLSN--CKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHS 144 (628)
Q Consensus 68 ~l~~~~~~~f~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~--l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~ 144 (628)
++++..|..+.+++ +|+.|++++|.++...+ ..+.. +++|++|++++|.+++..|..+..++ .|+.|++++
T Consensus 354 ~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~-----~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~-~L~~L~Ls~ 427 (768)
T 3rgz_A 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPIL-----PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCS-ELVSLHLSF 427 (768)
T ss_dssp EEEECCCTTHHHHTTTCSEEECCSSEEEEECC-----TTTTCSTTCCCCEEECCSSEEEEECCGGGGGCT-TCCEEECCS
T ss_pred ccCccccHHHHhhhcCCcEEEccCCCcCCCcC-----hhhhhcccCCccEEECCCCccccccCHHHhcCC-CCCEEECcC
Confidence 88888888888887 88888888888875322 12333 67788888888888777777777775 678888888
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCC
Q 037488 145 CNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVP 224 (628)
Q Consensus 145 n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~ 224 (628)
|.+++.+|..+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++.+.+|..+.++++|++|++++|++++..|
T Consensus 428 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p 507 (768)
T 3rgz_A 428 NYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507 (768)
T ss_dssp SEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred CcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCC
Confidence 88887778888888888888888888887778778888888888888888887778778888888888888888877778
Q ss_pred CCccCCCCCcEEEccCCcCC-cCCCCccCCCCCcEEEcCCCCCcCCCCC-------------------------------
Q 037488 225 ASFGNLTNLRSLHLGSNQIT-SIPSTLLNLKDILYLNLSSNFFTGPLPL------------------------------- 272 (628)
Q Consensus 225 ~~~~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~~------------------------------- 272 (628)
..++.+++|++|+|++|+++ .+|..+..+++|++|++++|.+++.+|.
T Consensus 508 ~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (768)
T 3rgz_A 508 KWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKEC 587 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTC
T ss_pred hHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccc
Confidence 78888888888888888887 4777777788888888888877655553
Q ss_pred ---------------------------------------cccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc
Q 037488 273 ---------------------------------------EIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR 313 (628)
Q Consensus 273 ---------------------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 313 (628)
.++.+++|+.|||++|++++.+|..++.+++|+.|+|++|+
T Consensus 588 ~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~ 667 (768)
T 3rgz_A 588 HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHND 667 (768)
T ss_dssp CSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSC
T ss_pred cccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCc
Confidence 34556789999999999999999999999999999999999
Q ss_pred CcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccccccccccCCCcccCCCCCC
Q 037488 314 LQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELLCGMPNLQ 393 (628)
Q Consensus 314 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (628)
+++.+|..++++++|+.|||++|+++|.+|..+..+++|+.|++++|+++|.+|..+.+..+...+|.||+.+||.|.
T Consensus 668 l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l-- 745 (768)
T 3rgz_A 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPL-- 745 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTS--
T ss_pred cCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred CCCcc
Q 037488 394 VPPCR 398 (628)
Q Consensus 394 ~~~~~ 398 (628)
++|.
T Consensus 746 -~~C~ 749 (768)
T 3rgz_A 746 -PRCD 749 (768)
T ss_dssp -CCCC
T ss_pred -cCCC
Confidence 3674
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.3e-46 Score=425.27 Aligned_cols=385 Identities=35% Similarity=0.550 Sum_probs=295.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC---------CCCCCEEEccCCcceecCCccccCC-CCCCEEeccCCccc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ---------LQNLEELLLWGNNFSGTIPSFIFNA-SKLSRLELQMNSFY 70 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~---------l~~L~~L~ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~ 70 (628)
|+|++|.+++..|..|.++++|++|++++|+ +++|++|++++|.+++.+|..+... ++|++|+|++|+++
T Consensus 228 L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~ 307 (768)
T 3rgz_A 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFY 307 (768)
T ss_dssp EECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEE
T ss_pred EECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCC
Confidence 4566666666666667777777777777765 3467788888888877778777665 88899999999888
Q ss_pred ccCccccCCCCCCCEEEccCcccc-CCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccc--------------
Q 037488 71 GFIPNTFGNLRNLNRLGLNDNYLT-SSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQ-------------- 135 (628)
Q Consensus 71 ~~~~~~f~~l~~L~~L~L~~N~l~-~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~-------------- 135 (628)
+..|..|+++++|++|++++|.++ .++. ..+.++++|++|++++|.+++..|..+..+..
T Consensus 308 ~~~p~~~~~l~~L~~L~L~~n~l~~~ip~-----~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~ 382 (768)
T 3rgz_A 308 GAVPPFFGSCSLLESLALSSNNFSGELPM-----DTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSG 382 (768)
T ss_dssp ECCCGGGGGCTTCCEEECCSSEEEEECCH-----HHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEE
T ss_pred CccchHHhcCCCccEEECCCCcccCcCCH-----HHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCC
Confidence 888888888899999999988887 3321 23677788888888888887777776665542
Q ss_pred ------------ccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccc
Q 037488 136 ------------SMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDL 203 (628)
Q Consensus 136 ------------~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 203 (628)
.++.|++++|.+++.+|..+.++++|+.|++++|++++.+|..++.+++|++|++++|++.+.+|..+
T Consensus 383 ~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~ 462 (768)
T 3rgz_A 383 PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQEL 462 (768)
T ss_dssp ECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred CcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHH
Confidence 35556666666666677777777788888888888777777778888888888888888877778788
Q ss_pred cCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC-cCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccE
Q 037488 204 CRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-SIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIK 282 (628)
Q Consensus 204 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 282 (628)
..+++|++|++++|++++..|..+..+++|+.|++++|+++ .+|.++..+++|++|++++|.+++.+|..+..+++|+.
T Consensus 463 ~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~ 542 (768)
T 3rgz_A 463 MYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIW 542 (768)
T ss_dssp GGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCE
T ss_pred cCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCE
Confidence 88888888888888888777888888888888888888887 47777888888888888888888888888888888888
Q ss_pred EEcCCCcCCCCCccc-----------------------------------------------------------------
Q 037488 283 IDLSMNNFSGVIPIT----------------------------------------------------------------- 297 (628)
Q Consensus 283 L~Ls~N~l~~~~p~~----------------------------------------------------------------- 297 (628)
|++++|.+++.+|..
T Consensus 543 L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g 622 (768)
T 3rgz_A 543 LDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGG 622 (768)
T ss_dssp EECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEE
T ss_pred EECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecc
Confidence 888888877666543
Q ss_pred -----cCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCC-c
Q 037488 298 -----IGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREG-S 371 (628)
Q Consensus 298 -----~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~-~ 371 (628)
++.+++|++|++++|++++.+|..++.+++|+.|+|++|.++|.+|..+..+++|+.||+++|+++|.+|... .
T Consensus 623 ~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~ 702 (768)
T 3rgz_A 623 HTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSA 702 (768)
T ss_dssp ECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGG
T ss_pred cCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhC
Confidence 2335678888888888888888888888888888888888888888888888888888888888888888642 2
Q ss_pred ccccccccccCCCcccCCC
Q 037488 372 FRNFLAESFKGNELLCGMP 390 (628)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~ 390 (628)
...+....+..|+....+|
T Consensus 703 l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 703 LTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp CCCCSEEECCSSEEEEECC
T ss_pred CCCCCEEECcCCcccccCC
Confidence 4445555666665544344
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.1e-44 Score=394.43 Aligned_cols=378 Identities=17% Similarity=0.240 Sum_probs=210.3
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccCC------------------------------------------------
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQL------------------------------------------------ 32 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l------------------------------------------------ 32 (628)
|+|++|+++|.+|..|++++.|++|+|++|.+
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l 165 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDC 165 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHH
Confidence 58999999999999999999999999999843
Q ss_pred ----------------------------------------CCCCEEEccCCcceec-----------------CCcccc-
Q 037488 33 ----------------------------------------QNLEELLLWGNNFSGT-----------------IPSFIF- 54 (628)
Q Consensus 33 ----------------------------------------~~L~~L~ls~N~l~~~-----------------~p~~~~- 54 (628)
++|++|+|++|.+++. +|..+.
T Consensus 166 ~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~ 245 (636)
T 4eco_A 166 INSDPQQKSIKKSSRITLKDTQIGQLSNNITFVSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKW 245 (636)
T ss_dssp HHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCG
T ss_pred hhcCccccccccccccchhhhhhccccCCCccCCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhh
Confidence 3444555555555443 444444
Q ss_pred -CCCCCCEEeccCCcccccCccccCCCCCCCEEEccCcc-ccC--CCCCCcccccccCCCCCcEEEcccCCCCCCCch--
Q 037488 55 -NASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNY-LTS--STPKLNFLSSLSNCKYLKYFSFSNNSLDGILPR-- 128 (628)
Q Consensus 55 -~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-l~~--~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~-- 128 (628)
++++|++|+|++|++.+.+|..|+++++|+.|++++|+ ++. ++..+..+..+..+++|++|++++|.++ .+|.
T Consensus 246 ~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~ 324 (636)
T 4eco_A 246 DNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVET 324 (636)
T ss_dssp GGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHH
T ss_pred cccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchh
Confidence 45555555555555544445555555555555555554 432 1111000001112245555555555554 3333
Q ss_pred HHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCC-CCEeecccCcccccCCccccCCC
Q 037488 129 AIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQK-LQLLNLEYNQLEGSIPDDLCRLA 207 (628)
Q Consensus 129 ~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~ 207 (628)
.++.++ .|+.|++++|.+.+.+| .+..+++|+.|++++|++. .+|..+..+++ |++|++++|++. .+|..+..+.
T Consensus 325 ~l~~l~-~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~ 400 (636)
T 4eco_A 325 SLQKMK-KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKS 400 (636)
T ss_dssp HHTTCT-TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTC
T ss_pred hhccCC-CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcc
Confidence 444443 35555555555554444 4555555555555555554 44444555555 555555555555 4444444433
Q ss_pred --CCCEEEccCCcCcccCCCCcc-------CCCCCcEEEccCCcCCcCCCCcc-CCCCCcEEEcCCCCCcCCCCCcccCC
Q 037488 208 --ALFQLDLGSNKLSGFVPASFG-------NLTNLRSLHLGSNQITSIPSTLL-NLKDILYLNLSSNFFTGPLPLEIGNL 277 (628)
Q Consensus 208 --~L~~L~L~~n~l~~~~~~~~~-------~l~~L~~L~L~~n~l~~lp~~~~-~l~~L~~L~l~~n~l~~~~~~~~~~l 277 (628)
+|++|++++|.+++..|..|. .+++|+.|++++|+++.+|..++ .+++|++|++++|.++..++..+...
T Consensus 401 l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~ 480 (636)
T 4eco_A 401 VSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDE 480 (636)
T ss_dssp SSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEET
T ss_pred cCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccc
Confidence 555555555555555555555 55566666666666666665443 35666666666666663333333322
Q ss_pred c-------cccEEEcCCCcCCCCCccccC--CCCCCCEEeCCCCcCcccCChhhcCCCCCCEEEC------cCCcccccC
Q 037488 278 K-------VLIKIDLSMNNFSGVIPITIG--YLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDL------SNNNLSGII 342 (628)
Q Consensus 278 ~-------~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l------~~N~l~~~~ 342 (628)
. +|+.|+|++|+++ .+|..+. .+++|++|++++|++++ +|..+..+++|+.|++ ++|.+.+.+
T Consensus 481 ~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~ 558 (636)
T 4eco_A 481 NENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREW 558 (636)
T ss_dssp TEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCC
T ss_pred cccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccC
Confidence 2 6666666666666 4455444 66666666666666664 5666666666666666 345556666
Q ss_pred chhhhcCCCCCEEEccCCcceecCCCCCcccccccccccCCCccc
Q 037488 343 PISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELLC 387 (628)
Q Consensus 343 ~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~ 387 (628)
|..+..+++|+.|++++|++ +.+|... +..+....+.+|+..|
T Consensus 559 p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 559 PEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNIS 601 (636)
T ss_dssp CTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCE
T ss_pred hHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcc
Confidence 66666666666666666666 4555432 2444444555554443
No 4
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.6e-42 Score=381.34 Aligned_cols=357 Identities=23% Similarity=0.240 Sum_probs=258.5
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|||++|.|+++.|..|.++++|++|++++|+ +++|++|+|++|.+++..|..|.++++|++|++++|++
T Consensus 38 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i 117 (606)
T 3t6q_A 38 LEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGI 117 (606)
T ss_dssp EECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCC
T ss_pred EEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCc
Confidence 6899999999999999999999999999986 56899999999999999999999999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccc--eeeccCCcc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSME--IFWMHSCNI 147 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~--~l~l~~n~~ 147 (628)
+++.+..|+++++|++|++++|.++.+.. ..+..+++|++|++++|.++++.|..|+.+. .++ .+++++|.+
T Consensus 118 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 118 SSIDFIPLHNQKTLESLYLGSNHISSIKL-----PKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQ-QATNLSLNLNGNDI 191 (606)
T ss_dssp SCGGGSCCTTCTTCCEEECCSSCCCCCCC-----CTTCCCTTCCEEECCSSCCCEECHHHHHTTT-TCCSEEEECTTCCC
T ss_pred ccCCcchhccCCcccEEECCCCcccccCc-----ccccCCcccCEEEcccCcccccChhhhhhhc-ccceeEEecCCCcc
Confidence 99889999999999999999999987642 2344588899999999998888888887775 455 677777777
Q ss_pred cccCCccccCC---------------------------------------------------CCCCEEEccCCcCCcccc
Q 037488 148 SGGIPEEISNL---------------------------------------------------TNLIAIYLGGNKLNGSIP 176 (628)
Q Consensus 148 ~~~~~~~~~~l---------------------------------------------------~~L~~L~L~~n~l~~~~p 176 (628)
.+..|..+... .+|+.|++++|.+.+..+
T Consensus 192 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 192 AGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp CEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred CccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 76655443221 045566666666665555
Q ss_pred ccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC-cCCCC-ccCCC
Q 037488 177 IALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-SIPST-LLNLK 254 (628)
Q Consensus 177 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~-~~~l~ 254 (628)
..|..+++|++|++++|+++ .+|..+.++++|++|++++|++.+..|..+..+++|+.|++++|.+. .+|.. +..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 55666666667777666666 45556666666666666666666665666666666666666666665 34433 55566
Q ss_pred CCcEEEcCCCCCcCCC--CCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCCh-hhcCCCCCCEE
Q 037488 255 DILYLNLSSNFFTGPL--PLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPD-SIGDLINLKSL 331 (628)
Q Consensus 255 ~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~-~~~~l~~L~~L 331 (628)
+|++|++++|.+++.. +..+..+++|++|++++|.+.+..|..+..+++|++|++++|++.+..+. .+..+++|+.|
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEE
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEE
Confidence 6666666666665544 55566666666666666666666666666666666666666666554433 35666666666
Q ss_pred ECcCCcccccCchhhhcCCCCCEEEccCCccee
Q 037488 332 DLSNNNLSGIIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 332 ~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
++++|.+.+..|..+..+++|+.|++++|++++
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 463 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPK 463 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGG
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCc
Confidence 666666666666666666666666666666654
No 5
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.5e-42 Score=383.28 Aligned_cols=382 Identities=21% Similarity=0.232 Sum_probs=273.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|.++++.|..|.++++|++|++++|+ +++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 37 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 116 (606)
T 3vq2_A 37 IDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKL 116 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCC
T ss_pred EECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCcc
Confidence 5899999999999999999999999999986 56899999999999988899999999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccc---cceeeccCCc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQS---MEIFWMHSCN 146 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~---l~~l~l~~n~ 146 (628)
+++.+..|+++++|++|++++|.++... .+..+.++++|++|++++|.++++.|..|+.+... +..+++++|.
T Consensus 117 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~----lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~ 192 (606)
T 3vq2_A 117 ASLESFPIGQLITLKKLNVAHNFIHSCK----LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNP 192 (606)
T ss_dssp CCSSSSCCTTCTTCCEEECCSSCCCCCC----CCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCC
T ss_pred ccccccccCCCCCCCEEeCCCCccccee----chHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCC
Confidence 9998899999999999999999998642 12468899999999999999998877766655421 2234444444
Q ss_pred ccccCCc-------------------------------------------------------------------------
Q 037488 147 ISGGIPE------------------------------------------------------------------------- 153 (628)
Q Consensus 147 ~~~~~~~------------------------------------------------------------------------- 153 (628)
+.+..+.
T Consensus 193 l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~ 272 (606)
T 3vq2_A 193 IDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTN 272 (606)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCT
T ss_pred cceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccc
Confidence 4332221
Q ss_pred -----------------------------cccCCCCCCEEEccCCcCCccccc--------------------cccCCCC
Q 037488 154 -----------------------------EISNLTNLIAIYLGGNKLNGSIPI--------------------ALGKLQK 184 (628)
Q Consensus 154 -----------------------------~~~~l~~L~~L~L~~n~l~~~~p~--------------------~~~~l~~ 184 (628)
.+..+++|+.|++++|.+ +.+|. .+..+++
T Consensus 273 ~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~ 351 (606)
T 3vq2_A 273 DFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPS 351 (606)
T ss_dssp TCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTT
T ss_pred cccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCC
Confidence 122333444444444444 23331 2334455
Q ss_pred CCEeecccCccccc--CCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC--CccCCCCCcEEE
Q 037488 185 LQLLNLEYNQLEGS--IPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS--TLLNLKDILYLN 260 (628)
Q Consensus 185 L~~L~L~~n~l~~~--~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~--~~~~l~~L~~L~ 260 (628)
|++|++++|++.+. .|..+..+++|++|++++|.+++ .|..+..+++|+.|++++|++.+++. .+..+++|++|+
T Consensus 352 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 430 (606)
T 3vq2_A 352 LSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLD 430 (606)
T ss_dssp CCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEE
T ss_pred CCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEE
Confidence 55555555555543 25556666666666666666654 34666777777777777777766543 566677777777
Q ss_pred cCCCCCcCCCCCcccCCccccEEEcCCCcCCC-CCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCccc
Q 037488 261 LSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSG-VIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~ 339 (628)
+++|.+++..|..+..+++|++|++++|.+++ .+|..++.+++|++|++++|++++..|..+..+++|+.|++++|+++
T Consensus 431 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 510 (606)
T 3vq2_A 431 ISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLL 510 (606)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred CcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCC
Confidence 77777777777777777777777777777776 36677777777888888888777777777777777888888888777
Q ss_pred ccCchhhhcCCCCCEEEccCCcceecCCCC-Cccc-ccccccccCCCcccCC
Q 037488 340 GIIPISLEKLLDLKDINVSFNKLEGEIPRE-GSFR-NFLAESFKGNELLCGM 389 (628)
Q Consensus 340 ~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~-~~~~~~~~~~~~~~~~ 389 (628)
+..|..+..+++|+.|++++|+++. +|.. ..+. .+....+.+|+..|..
T Consensus 511 ~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 511 FLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp CEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCC
Confidence 7777777777778888888887773 3332 2222 3555666777777654
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.1e-42 Score=382.10 Aligned_cols=360 Identities=19% Similarity=0.188 Sum_probs=218.8
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|+++++.|..|.++++|++|++++|+ +++|++|++++|.+++..|..|.++++|++|++++|++
T Consensus 62 L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l 141 (606)
T 3t6q_A 62 LDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHI 141 (606)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCC
T ss_pred EECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcc
Confidence 4677787777777777788888888877775 35677777777777766666677777777777777777
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCC---------------------------------------
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCK--------------------------------------- 110 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~--------------------------------------- 110 (628)
+++....+..+++|+.|++++|.++...+. .+..++
T Consensus 142 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 142 SSIKLPKGFPTEKLKVLDFQNNAIHYLSKE-----DMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CCCCCCTTCCCTTCCEEECCSSCCCEECHH-----HHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred cccCcccccCCcccCEEEcccCcccccChh-----hhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 765544455566777777766666543210 111111
Q ss_pred --------------------------------------CCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCC
Q 037488 111 --------------------------------------YLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIP 152 (628)
Q Consensus 111 --------------------------------------~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~ 152 (628)
+|+.|++++|.++++.+..|..++ .++.|++++|.++ .+|
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~-~lp 294 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFS-GLQELDLTATHLS-ELP 294 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCT-TCSEEECTTSCCS-CCC
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhcccc-CCCEEeccCCccC-CCC
Confidence 344555555555555555555553 5667777777666 455
Q ss_pred ccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCc-cccCCCCCCEEEccCCcCcccC--CCCccC
Q 037488 153 EEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPD-DLCRLAALFQLDLGSNKLSGFV--PASFGN 229 (628)
Q Consensus 153 ~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~l~~~~--~~~~~~ 229 (628)
..+..+++|++|++++|.+.+..|..+..+++|++|++++|.+.+.+|. .+..+++|++|++++|.+++.. +..+..
T Consensus 295 ~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 374 (606)
T 3t6q_A 295 SGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRN 374 (606)
T ss_dssp SSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTT
T ss_pred hhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhccc
Confidence 6666677777777777777666566666666666666666666544433 3566666666666666665544 455666
Q ss_pred CCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCC-cccCCccccEEEcCCCcCCCCCccccCCCCCCCEE
Q 037488 230 LTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPL-EIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYL 307 (628)
Q Consensus 230 l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 307 (628)
+++|++|++++|.+..+ |..+..+++|++|++++|.+++..+. .+..+++|+.|++++|.+++..|..++.+++|++|
T Consensus 375 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 454 (606)
T 3t6q_A 375 LSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHL 454 (606)
T ss_dssp CTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEE
T ss_pred CCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEE
Confidence 66666666666666553 34455556666666666665544332 25556666666666666655555555556666666
Q ss_pred eCCCCcCccc---CChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 308 FLEYNRLQGS---IPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 308 ~l~~n~~~~~---~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
++++|++.+. .+..+..+++|+.|++++|.++++.|..|..+++|+.|++++|++++.+|
T Consensus 455 ~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 517 (606)
T 3t6q_A 455 NLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSI 517 (606)
T ss_dssp ECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGG
T ss_pred ECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCCh
Confidence 6666655541 12345555566666666666655555555555666666666665555444
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-42 Score=396.57 Aligned_cols=382 Identities=24% Similarity=0.274 Sum_probs=254.7
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC------------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ------------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNS 68 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~------------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 68 (628)
||||+|.|+++.|..|.++++|++|+|++|. +++|++|+|++|.+++..|..|.++++|++|+|++|.
T Consensus 29 LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~ 108 (844)
T 3j0a_A 29 LLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCG 108 (844)
T ss_dssp EEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCC
T ss_pred EECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCC
Confidence 6899999999999999999999999999983 5789999999999999999999999999999999999
Q ss_pred ccccCccc--cCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccc-cc---------
Q 037488 69 FYGFIPNT--FGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS-QS--------- 136 (628)
Q Consensus 69 l~~~~~~~--f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~~--------- 136 (628)
+++..+.. |+++++|++|+|++|.++...+. ..+.++++|++|++++|.+++..+..+..+. ..
T Consensus 109 l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~----~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n 184 (844)
T 3j0a_A 109 LSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLH----PSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAAN 184 (844)
T ss_dssp CSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCC----GGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCS
T ss_pred CCcccccCccccccCCCCEEECCCCcccccccc----hhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCC
Confidence 99855554 99999999999999999876432 3578899999999999988887776665431 11
Q ss_pred ---------------------cceeeccCCcccccCCccccC--------------------------------------
Q 037488 137 ---------------------MEIFWMHSCNISGGIPEEISN-------------------------------------- 157 (628)
Q Consensus 137 ---------------------l~~l~l~~n~~~~~~~~~~~~-------------------------------------- 157 (628)
++.|++++|.+.+..+..+..
T Consensus 185 ~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~ 264 (844)
T 3j0a_A 185 SLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLA 264 (844)
T ss_dssp BSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTT
T ss_pred ccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccc
Confidence 344444444333222211110
Q ss_pred CCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEE
Q 037488 158 LTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLH 237 (628)
Q Consensus 158 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 237 (628)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++.+..|..|.++++|++|+|++|.+++..|..|..+++|+.|+
T Consensus 265 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 344 (844)
T 3j0a_A 265 RSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYID 344 (844)
T ss_dssp TSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEE
T ss_pred cCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEE
Confidence 13445555555555444444455555555555555555544444455555555555555555444444455555555555
Q ss_pred ccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCC------------------CC----------------------cccC
Q 037488 238 LGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPL------------------PL----------------------EIGN 276 (628)
Q Consensus 238 L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~------------------~~----------------------~~~~ 276 (628)
+++|.+..++. .+..+++|++|++++|.+++.. |. .+..
T Consensus 345 L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~ 424 (844)
T 3j0a_A 345 LQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLR 424 (844)
T ss_dssp CCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTT
T ss_pred CCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhc
Confidence 55554444432 2333444444444444433210 00 0123
Q ss_pred CccccEEEcCCCcCCC------------------------------CCccccCCCCCCCEEeCCCCcCcccCChhhcCCC
Q 037488 277 LKVLIKIDLSMNNFSG------------------------------VIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLI 326 (628)
Q Consensus 277 l~~L~~L~Ls~N~l~~------------------------------~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~ 326 (628)
+++|+.|+|++|++++ ..+..|..+++|+.|+|++|++++.+|..|..++
T Consensus 425 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 504 (844)
T 3j0a_A 425 VPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLT 504 (844)
T ss_dssp CTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCC
T ss_pred CCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchh
Confidence 4444555555554442 2234466778888888888888888888888888
Q ss_pred CCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccccccccccCCCcccCCC
Q 037488 327 NLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELLCGMP 390 (628)
Q Consensus 327 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 390 (628)
+|+.|++++|+++++.+..+. ++|+.|++++|++++.+|.. +..+....+.+|+..|..+
T Consensus 505 ~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 505 ALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSS
T ss_pred hhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccc
Confidence 999999999988887776665 78888999999888877753 4566677788888888543
No 8
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.5e-41 Score=381.31 Aligned_cols=354 Identities=22% Similarity=0.332 Sum_probs=193.1
Q ss_pred CcccCCCcccCCChhccCCCCCCEEec-CccCCC----------------------------------------------
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYL-QNVQLQ---------------------------------------------- 33 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l-~~n~l~---------------------------------------------- 33 (628)
|+|++|+|.|.+|..|++|+.|+.|+| ++|.+.
T Consensus 328 L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~ 407 (876)
T 4ecn_A 328 LSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDA 407 (876)
T ss_dssp EECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHH
T ss_pred EECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHH
Confidence 689999999999999999999999999 666310
Q ss_pred ----------------CCCEEEc--cCCcceecCCccccCCCCCCEEeccCCcccc-----------------cCccccC
Q 037488 34 ----------------NLEELLL--WGNNFSGTIPSFIFNASKLSRLELQMNSFYG-----------------FIPNTFG 78 (628)
Q Consensus 34 ----------------~L~~L~l--s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~~~~f~ 78 (628)
.++.+.+ ..|.+++ +|..|.++++|+.|+|++|++++ .+|..++
T Consensus 408 l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~ 486 (876)
T 4ecn_A 408 INRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELS 486 (876)
T ss_dssp HHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCC
T ss_pred hhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhh
Confidence 0111112 1255555 45555666666666666666655 1455544
Q ss_pred --CCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCC-CCC-CCchHHhccc------cccceeeccCCccc
Q 037488 79 --NLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNS-LDG-ILPRAIGNLS------QSMEIFWMHSCNIS 148 (628)
Q Consensus 79 --~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~-l~~-~~p~~~~~l~------~~l~~l~l~~n~~~ 148 (628)
++++|+.|+|++|.+....| ..+.++++|++|++++|+ +++ .+|..++.+. ..|+.|++++|.+.
T Consensus 487 f~~L~~L~~L~Ls~N~l~~~iP-----~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 487 WSNLKDLTDVELYNCPNMTQLP-----DFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp GGGCTTCCEEEEESCTTCCSCC-----GGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred hccCCCCCEEECcCCCCCccCh-----HHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 56666666666665443322 345555566666666665 554 4555554442 24555666666555
Q ss_pred ccCCc--cccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCC-CCEEEccCCcCcccCCC
Q 037488 149 GGIPE--EISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAA-LFQLDLGSNKLSGFVPA 225 (628)
Q Consensus 149 ~~~~~--~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~-L~~L~L~~n~l~~~~~~ 225 (628)
.+|. .|+++++|+.|+|++|++. .+| .++.+++|+.|+|++|++. .+|..+..+++ |+.|+|++|+++ .+|.
T Consensus 562 -~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~ 636 (876)
T 4ecn_A 562 -EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN 636 (876)
T ss_dssp -BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS
T ss_pred -ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch
Confidence 4454 5555666666666666555 444 5555555666666665555 45555555555 555555555555 3444
Q ss_pred CccCCC-------------------------------CCcEEEccCCcCCcCCCCcc-CCCCCcEEEcCCCCCcCCCCCc
Q 037488 226 SFGNLT-------------------------------NLRSLHLGSNQITSIPSTLL-NLKDILYLNLSSNFFTGPLPLE 273 (628)
Q Consensus 226 ~~~~l~-------------------------------~L~~L~L~~n~l~~lp~~~~-~l~~L~~L~l~~n~l~~~~~~~ 273 (628)
.+..++ +|+.|+|++|.++.+|..++ .+++|++|++++|.++..++..
T Consensus 637 ~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~ 716 (876)
T 4ecn_A 637 IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENS 716 (876)
T ss_dssp CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTS
T ss_pred hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHH
Confidence 444433 44444444444444444433 3455555555555555322222
Q ss_pred ccC-------CccccEEEcCCCcCCCCCccccC--CCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcC------Ccc
Q 037488 274 IGN-------LKVLIKIDLSMNNFSGVIPITIG--YLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSN------NNL 338 (628)
Q Consensus 274 ~~~-------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~------N~l 338 (628)
+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+..+++|+.|++++ |.+
T Consensus 717 ~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l 794 (876)
T 4ecn_A 717 LKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRI 794 (876)
T ss_dssp SSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBC
T ss_pred hccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccc
Confidence 221 125555555555555 3444443 45555555555555553 444455555555555543 444
Q ss_pred cccCchhhhcCCCCCEEEccCCcceecCCC
Q 037488 339 SGIIPISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 339 ~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
.+.+|..+..+++|+.|++++|++ +.+|.
T Consensus 795 ~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~ 823 (876)
T 4ecn_A 795 LRQWPTGITTCPSLIQLQIGSNDI-RKVDE 823 (876)
T ss_dssp CCCCCTTGGGCSSCCEEECCSSCC-CBCCS
T ss_pred cccChHHHhcCCCCCEEECCCCCC-CccCH
Confidence 455555555555555555555555 44443
No 9
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-41 Score=371.47 Aligned_cols=382 Identities=23% Similarity=0.235 Sum_probs=286.0
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|||++|.++++.+..|.++++|+.|++++|+ +++|++|+|++|.+++..|..|.++++|++|++++|++
T Consensus 33 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 112 (570)
T 2z63_A 33 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 112 (570)
T ss_dssp EECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccccccc
Confidence 5899999999999999999999999999985 56899999999999999889999999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccccc----ceeeccCC
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSM----EIFWMHSC 145 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l----~~l~l~~n 145 (628)
+++.+..|+++++|++|++++|.++.+. .+..+.++++|++|++++|.++++.+..+..+.. + +.+++++|
T Consensus 113 ~~l~~~~~~~l~~L~~L~L~~n~l~~~~----lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~~~~~L~l~~n 187 (570)
T 2z63_A 113 ASLENFPIGHLKTLKELNVAHNLIQSFK----LPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQ-MPLLNLSLDLSLN 187 (570)
T ss_dssp CCSTTCSCTTCTTCCEEECCSSCCCCCC----CCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHT-CTTCCCEEECTTC
T ss_pred ccCCCccccccccccEEecCCCccceec----ChhhhcccCCCCEEeCcCCccceecHHHccchhc-cchhhhhcccCCC
Confidence 9988878999999999999999998642 1246888999999999999998887777766542 3 45555555
Q ss_pred cccccC--------------------------------------------------------------------------
Q 037488 146 NISGGI-------------------------------------------------------------------------- 151 (628)
Q Consensus 146 ~~~~~~-------------------------------------------------------------------------- 151 (628)
.+.+..
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 544433
Q ss_pred -------CccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCcc-c-------------------c
Q 037488 152 -------PEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDD-L-------------------C 204 (628)
Q Consensus 152 -------~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~-~-------------------~ 204 (628)
|..+..+++|+.|++++|.+. .+|..+..+ +|++|++++|.+. .+|.. + .
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~~ 344 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSEV 344 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCCC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCcccccccCEEeCcCCccccccccc
Confidence 333445566777777777665 355555555 5555555555554 22221 0 3
Q ss_pred CCCCCCEEEccCCcCcccC--CCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCC-CcccCCcccc
Q 037488 205 RLAALFQLDLGSNKLSGFV--PASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLP-LEIGNLKVLI 281 (628)
Q Consensus 205 ~l~~L~~L~L~~n~l~~~~--~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~-~~~~~l~~L~ 281 (628)
.+++|++|++++|++++.. +..+..+++|+.|++++|.++.+|..+..+++|++|++++|.+++..+ ..+..+++|+
T Consensus 345 ~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 424 (570)
T 2z63_A 345 DLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLI 424 (570)
T ss_dssp BCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCC
T ss_pred cCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCC
Confidence 4566777777777766543 455667777777777777777776667777788888888887776554 4577778888
Q ss_pred EEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCc-ccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCC
Q 037488 282 KIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ-GSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFN 360 (628)
Q Consensus 282 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 360 (628)
+|++++|.+.+..|..+..+++|++|++++|.++ +.+|..+..+++|+.|++++|.+++..|..+..+++|+.|++++|
T Consensus 425 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 425 YLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 8888888887777777777888888888888876 457777788888888888888888777777778888888888888
Q ss_pred cceecCCCC-CcccccccccccCCCcccCCC
Q 037488 361 KLEGEIPRE-GSFRNFLAESFKGNELLCGMP 390 (628)
Q Consensus 361 ~l~~~~p~~-~~~~~~~~~~~~~~~~~~~~~ 390 (628)
++++.++.. ..+..+....+.+|+..|..+
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 877665543 334556666677777776544
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=6.6e-42 Score=378.13 Aligned_cols=347 Identities=21% Similarity=0.302 Sum_probs=308.8
Q ss_pred CCCcccCCChhccCCCCCCEEecCccC------------------------------CCCCCEEEccCCcceecCCcccc
Q 037488 5 FNKLVGVVPTTIFNVSTLNSLYLQNVQ------------------------------LQNLEELLLWGNNFSGTIPSFIF 54 (628)
Q Consensus 5 ~N~l~~~~p~~~~~l~~L~~L~l~~n~------------------------------l~~L~~L~ls~N~l~~~~p~~~~ 54 (628)
.|++++ +|..|+++++|++|+|++|+ +++|++|+|++|.+.+.+|..|.
T Consensus 192 ~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~ 270 (636)
T 4eco_A 192 SNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLK 270 (636)
T ss_dssp SCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTT
T ss_pred cCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHh
Confidence 689999 89899999999999999874 45689999999999999999999
Q ss_pred CCCCCCEEeccCCc-ccc-cCccccCCC------CCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCC
Q 037488 55 NASKLSRLELQMNS-FYG-FIPNTFGNL------RNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGIL 126 (628)
Q Consensus 55 ~l~~L~~L~L~~N~-l~~-~~~~~f~~l------~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 126 (628)
++++|++|+|++|+ +++ .+|..++++ ++|+.|++++|.++.++. ...+.++++|++|++++|.+++.+
T Consensus 271 ~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~----~~~l~~l~~L~~L~L~~N~l~g~i 346 (636)
T 4eco_A 271 ALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPV----ETSLQKMKKLGMLECLYNQLEGKL 346 (636)
T ss_dssp TCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCC----HHHHTTCTTCCEEECCSCCCEEEC
T ss_pred cCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCc----hhhhccCCCCCEEeCcCCcCccch
Confidence 99999999999998 988 788888876 999999999999986542 015789999999999999999888
Q ss_pred chHHhccccccceeeccCCcccccCCccccCCCC-CCEEEccCCcCCccccccccCCC--CCCEeecccCcccccCCccc
Q 037488 127 PRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN-LIAIYLGGNKLNGSIPIALGKLQ--KLQLLNLEYNQLEGSIPDDL 203 (628)
Q Consensus 127 p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~--~L~~L~L~~n~l~~~~p~~~ 203 (628)
| .|..++ .|+.|++++|.+. .+|..+..+++ |+.|++++|.++ .+|..+..+. +|++|++++|++.+..|..+
T Consensus 347 p-~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l 422 (636)
T 4eco_A 347 P-AFGSEI-KLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNF 422 (636)
T ss_dssp C-CCEEEE-EESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSS
T ss_pred h-hhCCCC-CCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhh
Confidence 8 787776 7999999999999 78888999999 999999999998 7888777755 89999999999999999888
Q ss_pred c-------CCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCC--------CCcEEEcCCCCCcC
Q 037488 204 C-------RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLK--------DILYLNLSSNFFTG 268 (628)
Q Consensus 204 ~-------~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~--------~L~~L~l~~n~l~~ 268 (628)
. .+++|++|++++|+++...+..+..+++|+.|+|++|+++.+|..++... +|++|++++|.++
T Consensus 423 ~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 501 (636)
T 4eco_A 423 DPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT- 501 (636)
T ss_dssp CTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-
T ss_pred cccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-
Confidence 8 88899999999999997655567789999999999999999998765432 9999999999999
Q ss_pred CCCCccc--CCccccEEEcCCCcCCCCCccccCCCCCCCEEeC------CCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 269 PLPLEIG--NLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFL------EYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 269 ~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l------~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
.+|..+. .+++|+.|+|++|++++ +|..+..+++|++|++ ++|++.+.+|..+..+++|+.|++++|.+.
T Consensus 502 ~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~- 579 (636)
T 4eco_A 502 KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIR- 579 (636)
T ss_dssp BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCC-
T ss_pred ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCC-
Confidence 5677776 99999999999999997 8888999999999999 567888899999999999999999999995
Q ss_pred cCchhhhcCCCCCEEEccCCcceec
Q 037488 341 IIPISLEKLLDLKDINVSFNKLEGE 365 (628)
Q Consensus 341 ~~~~~~~~l~~L~~l~l~~N~l~~~ 365 (628)
.+|..+. ++|+.|++++|++...
T Consensus 580 ~ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 580 KVNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp BCCSCCC--TTCCEEECCSCTTCEE
T ss_pred ccCHhHh--CcCCEEECcCCCCccc
Confidence 5566554 7999999999998753
No 11
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=3.2e-40 Score=369.64 Aligned_cols=389 Identities=24% Similarity=0.277 Sum_probs=287.5
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccCC--------------CC--------------------------CCEEEc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQL--------------QN--------------------------LEELLL 40 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l--------------~~--------------------------L~~L~l 40 (628)
|++++|.++++.|..|.++++|+.|+++++++ ++ |++|+|
T Consensus 176 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~L 255 (680)
T 1ziw_A 176 LELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDL 255 (680)
T ss_dssp EECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEEC
T ss_pred EECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEEC
Confidence 46777777777777777665554444444321 33 445555
Q ss_pred cCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCC--CCccc--ccccCCCCCcEEE
Q 037488 41 WGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTP--KLNFL--SSLSNCKYLKYFS 116 (628)
Q Consensus 41 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~--~~~~~--~~~~~l~~L~~L~ 116 (628)
++|.+++..|..|..+++|+.|++++|++.++.|.+|.++++|+.|++++|....... .++.+ ..+..+++|++|+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~ 335 (680)
T 1ziw_A 256 SYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLN 335 (680)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEE
T ss_pred CCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEE
Confidence 5555544444445555555555555555555444455555555555554443221000 00000 1466778888888
Q ss_pred cccCCCCCCCchHHhccccccceeeccCCcccc--cCCccccCC--CCCCEEEccCCcCCccccccccCCCCCCEeeccc
Q 037488 117 FSNNSLDGILPRAIGNLSQSMEIFWMHSCNISG--GIPEEISNL--TNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY 192 (628)
Q Consensus 117 l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~--~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 192 (628)
+++|.+.++.+..|..++ .|+.+++++|.+.. ..+..|..+ ++|+.|++++|++.+..|..+..+++|++|++++
T Consensus 336 l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 414 (680)
T 1ziw_A 336 MEDNDIPGIKSNMFTGLI-NLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGL 414 (680)
T ss_dssp CCSCCBCCCCTTTTTTCT-TCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCCCccCCCChhHhcccc-CCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCC
Confidence 888888887777777775 68888888776432 222333333 5788888888999888888899999999999999
Q ss_pred CcccccCC-ccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC---cCCCCccCCCCCcEEEcCCCCCcC
Q 037488 193 NQLEGSIP-DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT---SIPSTLLNLKDILYLNLSSNFFTG 268 (628)
Q Consensus 193 n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~lp~~~~~l~~L~~L~l~~n~l~~ 268 (628)
|++.+.+| ..+.++++|++|++++|++.+..+..|..+++|+.|++++|.+. .+|..+..+++|++|++++|.+++
T Consensus 415 N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~ 494 (680)
T 1ziw_A 415 NEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN 494 (680)
T ss_dssp SCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC
T ss_pred CcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCc
Confidence 99987655 67889999999999999999888889999999999999999886 468888899999999999999998
Q ss_pred CCCCcccCCccccEEEcCCCcCCCCCc--------cccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 269 PLPLEIGNLKVLIKIDLSMNNFSGVIP--------ITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
..+..|.++++|+.|++++|++++..+ ..+..+++|++|++++|+++...+..|.++++|+.|++++|++++
T Consensus 495 i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 574 (680)
T 1ziw_A 495 INDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT 574 (680)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCc
Confidence 888889999999999999999986532 237889999999999999996666679999999999999999998
Q ss_pred cCchhhhcCCCCCEEEccCCcceecCCCCC--cccccccccccCCCcccCCC
Q 037488 341 IIPISLEKLLDLKDINVSFNKLEGEIPREG--SFRNFLAESFKGNELLCGMP 390 (628)
Q Consensus 341 ~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~~~~~~~~~~ 390 (628)
+.+..|..+++|+.|++++|++++..+... .+..+....+.+|+..|..+
T Consensus 575 l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 575 LPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 888888999999999999999987665422 35567778888999998754
No 12
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.9e-39 Score=363.39 Aligned_cols=361 Identities=24% Similarity=0.221 Sum_probs=283.6
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|.|+++.+..|.++++|++|++++|+ +++|++|+|++|.++++.+..|.++++|++|+|++|++
T Consensus 30 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l 109 (680)
T 1ziw_A 30 LNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSI 109 (680)
T ss_dssp EECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred EECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCcc
Confidence 5899999999999899999999999999986 56799999999999987777899999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcc-ccccceeeccCCccc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNL-SQSMEIFWMHSCNIS 148 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l-~~~l~~l~l~~n~~~ 148 (628)
+++.|.+|+++++|++|++++|.++...+ ..+.++++|++|++++|.+++..+..+..+ ...|+.|++++|.+.
T Consensus 110 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~ 184 (680)
T 1ziw_A 110 QKIKNNPFVKQKNLITLDLSHNGLSSTKL-----GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIK 184 (680)
T ss_dssp CCCCSCTTTTCTTCCEEECCSSCCSCCCC-----CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCC
T ss_pred CccChhHccccCCCCEEECCCCcccccCc-----hhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCccc
Confidence 99999999999999999999999987654 357889999999999999998888777543 147999999999998
Q ss_pred ccCCccccCC---------------------------CCCCEEEccCCcCCccccccccCCCC--CCEeecccCcccccC
Q 037488 149 GGIPEEISNL---------------------------TNLIAIYLGGNKLNGSIPIALGKLQK--LQLLNLEYNQLEGSI 199 (628)
Q Consensus 149 ~~~~~~~~~l---------------------------~~L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~ 199 (628)
+..|..+..+ ++|+.|++++|.+.+..|..+..++. |++|++++|++.+..
T Consensus 185 ~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~ 264 (680)
T 1ziw_A 185 EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVG 264 (680)
T ss_dssp CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEEC
T ss_pred ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccC
Confidence 8877766544 56777888888888777777877755 999999999988888
Q ss_pred CccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC------cCCC----CccCCCCCcEEEcCCCCCcCC
Q 037488 200 PDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT------SIPS----TLLNLKDILYLNLSSNFFTGP 269 (628)
Q Consensus 200 p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~------~lp~----~~~~l~~L~~L~l~~n~l~~~ 269 (628)
|..|..+++|++|++++|.+.+..|..|..+++|+.|++++|... .+|. .+..+++|++|++++|.+++.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~ 344 (680)
T 1ziw_A 265 NDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGI 344 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCC
T ss_pred cccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCC
Confidence 888888999999999999998888888888888888888876543 3443 566778888888888888887
Q ss_pred CCCcccCCccccEEEcCCCcCCCC--CccccCCC--CCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCc-h
Q 037488 270 LPLEIGNLKVLIKIDLSMNNFSGV--IPITIGYL--KDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIP-I 344 (628)
Q Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l--~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~-~ 344 (628)
.+..|.++++|++|++++|.+... .+..+..+ ++|+.|++++|++++..|..|..+++|+.|++++|.+.+.+| .
T Consensus 345 ~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 424 (680)
T 1ziw_A 345 KSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQ 424 (680)
T ss_dssp CTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSG
T ss_pred ChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcc
Confidence 777788888888888877764321 11222222 356666666666666666666666666666666666655333 4
Q ss_pred hhhcCCCCCEEEccCCcceecC
Q 037488 345 SLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 345 ~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
.+..+++|+.|++++|++.+..
T Consensus 425 ~~~~l~~L~~L~Ls~n~l~~~~ 446 (680)
T 1ziw_A 425 EWRGLENIFEIYLSYNKYLQLT 446 (680)
T ss_dssp GGTTCTTCCEEECCSCSEEECC
T ss_pred cccCcccccEEecCCCCcceeC
Confidence 5666666666666666665443
No 13
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.6e-40 Score=367.16 Aligned_cols=364 Identities=21% Similarity=0.207 Sum_probs=297.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|.++++.|..|.++++|++|++++|+ +++|++|+|++|.+++..+..|.++++|++|++++|.+
T Consensus 61 L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 140 (606)
T 3vq2_A 61 LDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFI 140 (606)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCC
T ss_pred EeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcc
Confidence 5899999999999999999999999999986 56799999999999988888899999999999999999
Q ss_pred ccc-CccccCCCCCCCEEEccCccccCCCCCC-cccc---------------------cccCCCCCcEEEcccCCCCC-C
Q 037488 70 YGF-IPNTFGNLRNLNRLGLNDNYLTSSTPKL-NFLS---------------------SLSNCKYLKYFSFSNNSLDG-I 125 (628)
Q Consensus 70 ~~~-~~~~f~~l~~L~~L~L~~N~l~~~~~~~-~~~~---------------------~~~~l~~L~~L~l~~n~l~~-~ 125 (628)
.++ +|..|+++++|++|++++|.++.+++.. ..+. ......+|++|++++|.+.+ .
T Consensus 141 ~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~ 220 (606)
T 3vq2_A 141 HSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNI 220 (606)
T ss_dssp CCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHH
T ss_pred cceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhH
Confidence 874 4889999999999999999988765421 0000 01112255556655554431 0
Q ss_pred Cch-----------------------------------------------------------------------------
Q 037488 126 LPR----------------------------------------------------------------------------- 128 (628)
Q Consensus 126 ~p~----------------------------------------------------------------------------- 128 (628)
.|.
T Consensus 221 ~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l 300 (606)
T 3vq2_A 221 MKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKYL 300 (606)
T ss_dssp HHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCCC
T ss_pred HHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchhh
Confidence 000
Q ss_pred -HHhccccccceeeccCCcccccCC--------------------ccccCCCCCCEEEccCCcCCcc--ccccccCCCCC
Q 037488 129 -AIGNLSQSMEIFWMHSCNISGGIP--------------------EEISNLTNLIAIYLGGNKLNGS--IPIALGKLQKL 185 (628)
Q Consensus 129 -~~~~l~~~l~~l~l~~n~~~~~~~--------------------~~~~~l~~L~~L~L~~n~l~~~--~p~~~~~l~~L 185 (628)
.+..+ ..++.|++++|.+ +.+| ..+..+++|+.|++++|.+++. .|..+..+++|
T Consensus 301 ~~l~~~-~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L 378 (606)
T 3vq2_A 301 EDVPKH-FKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSL 378 (606)
T ss_dssp CCCCTT-CCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCC
T ss_pred hhcccc-ccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCCcc
Confidence 01111 1345555555555 2333 1355677888888888888765 37788999999
Q ss_pred CEeecccCcccccCCccccCCCCCCEEEccCCcCcccCC-CCccCCCCCcEEEccCCcCCc-CCCCccCCCCCcEEEcCC
Q 037488 186 QLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVP-ASFGNLTNLRSLHLGSNQITS-IPSTLLNLKDILYLNLSS 263 (628)
Q Consensus 186 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~-lp~~~~~l~~L~~L~l~~ 263 (628)
++|++++|.+.+ +|..+..+++|+.|++++|++.+..| ..+..+++|+.|++++|.++. .|..+..+++|++|++++
T Consensus 379 ~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 457 (606)
T 3vq2_A 379 RHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAG 457 (606)
T ss_dssp CEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTT
T ss_pred cEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCC
Confidence 999999999985 56889999999999999999998877 689999999999999999987 567788999999999999
Q ss_pred CCCcC-CCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccC
Q 037488 264 NFFTG-PLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGII 342 (628)
Q Consensus 264 n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 342 (628)
|.+++ .+|..++.+++|+.|++++|++++..|..++.+++|++|++++|++++..|..+..+++|+.|++++|+++. +
T Consensus 458 n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~ 536 (606)
T 3vq2_A 458 NSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIET-S 536 (606)
T ss_dssp CEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCC-E
T ss_pred CcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcc-c
Confidence 99987 478899999999999999999999999999999999999999999999889999999999999999999995 4
Q ss_pred chhhhcCC-CCCEEEccCCcceecCCC
Q 037488 343 PISLEKLL-DLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 343 ~~~~~~l~-~L~~l~l~~N~l~~~~p~ 368 (628)
|..+..++ +|+.+++++|++.+.++.
T Consensus 537 p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 537 KGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp ESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CHhHhhhcccCcEEEccCCCcccCCcc
Confidence 55588887 599999999999987663
No 14
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-40 Score=361.56 Aligned_cols=372 Identities=22% Similarity=0.242 Sum_probs=221.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|+|+++.|..|.++++|++|++++|+ +++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 31 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l 110 (549)
T 2z81_A 31 LDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPY 110 (549)
T ss_dssp EECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCC
T ss_pred EECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcc
Confidence 4566666666666666667777777766664 34566677777766666555666666677777776666
Q ss_pred ccc-CccccCCCCCCCEEEccCcc-ccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcc
Q 037488 70 YGF-IPNTFGNLRNLNRLGLNDNY-LTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNI 147 (628)
Q Consensus 70 ~~~-~~~~f~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~ 147 (628)
+++ .|..|+++++|++|++++|. +..+++ ..+.++++|++|++++|.+++..|..+..+. .++.|+++.|.+
T Consensus 111 ~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~-~L~~L~l~~n~~ 184 (549)
T 2z81_A 111 QTLGVTSLFPNLTNLQTLRIGNVETFSEIRR-----IDFAGLTSLNELEIKALSLRNYQSQSLKSIR-DIHHLTLHLSES 184 (549)
T ss_dssp SSSCSSCSCTTCTTCCEEEEEESSSCCEECT-----TTTTTCCEEEEEEEEETTCCEECTTTTTTCS-EEEEEEEECSBS
T ss_pred cccchhhhhhccCCccEEECCCCccccccCH-----hhhhcccccCeeeccCCcccccChhhhhccc-cCceEecccCcc
Confidence 653 34566666667777666665 333221 2356666666677766666665555554443 233333333332
Q ss_pred cccCCccccCCCCCCEEEccCCcCCccc--cc-----------------------------c------------------
Q 037488 148 SGGIPEEISNLTNLIAIYLGGNKLNGSI--PI-----------------------------A------------------ 178 (628)
Q Consensus 148 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~--p~-----------------------------~------------------ 178 (628)
....+..+..+++|+.|++++|++.+.. |. .
T Consensus 185 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~ 264 (549)
T 2z81_A 185 AFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLN 264 (549)
T ss_dssp TTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEE
T ss_pred cccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhcccccccccccccc
Confidence 2111111123444444444444443310 00 0
Q ss_pred -----------------------------------------ccCCCCCCEeecccCcccccCCccc-cCCCCCCEEEccC
Q 037488 179 -----------------------------------------LGKLQKLQLLNLEYNQLEGSIPDDL-CRLAALFQLDLGS 216 (628)
Q Consensus 179 -----------------------------------------~~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~ 216 (628)
+..+.+|+.|++++|++. .+|..+ .++++|++|++++
T Consensus 265 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~ 343 (549)
T 2z81_A 265 GLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSE 343 (549)
T ss_dssp CCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCS
T ss_pred ccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccC
Confidence 001123444555555544 344443 4577788888888
Q ss_pred CcCcccCC---CCccCCCCCcEEEccCCcCCcCCC---CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcC
Q 037488 217 NKLSGFVP---ASFGNLTNLRSLHLGSNQITSIPS---TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNF 290 (628)
Q Consensus 217 n~l~~~~~---~~~~~l~~L~~L~L~~n~l~~lp~---~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (628)
|++.+..| ..++.+++|+.|++++|+++.+|. .+..+++|++|++++|.++ .+|..+..+++|++|++++|.+
T Consensus 344 N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l 422 (549)
T 2z81_A 344 NLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGI 422 (549)
T ss_dssp SCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCC
T ss_pred CccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCc
Confidence 88776543 346677788888888888777652 3666777888888888777 4566677777788888888877
Q ss_pred CCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC-
Q 037488 291 SGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE- 369 (628)
Q Consensus 291 ~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~- 369 (628)
+.. |..+ .++|++|++++|++++.+ ..+++|+.|++++|+++.+ |. ...+++|+.|++++|++++.+|..
T Consensus 423 ~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~i-p~-~~~l~~L~~L~Ls~N~l~~~~~~~~ 493 (549)
T 2z81_A 423 RVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTL-PD-ASLFPVLLVMKISRNQLKSVPDGIF 493 (549)
T ss_dssp SCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSC-CC-GGGCTTCCEEECCSSCCCCCCTTGG
T ss_pred ccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccCcC-CC-cccCccCCEEecCCCccCCcCHHHH
Confidence 643 3322 256777777777776532 3566777777777777643 33 345677777777777777655542
Q ss_pred CcccccccccccCCCcccCC
Q 037488 370 GSFRNFLAESFKGNELLCGM 389 (628)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~ 389 (628)
..+..+....+.+|+..|..
T Consensus 494 ~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 494 DRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp GGCTTCCEEECCSSCBCCCH
T ss_pred hcCcccCEEEecCCCccCCC
Confidence 33455556666677766653
No 15
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.9e-40 Score=349.02 Aligned_cols=366 Identities=20% Similarity=0.207 Sum_probs=300.1
Q ss_pred cccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcce-ecCCccccCCCCCCEEeccCCcc
Q 037488 2 AFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFS-GTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 2 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
+.+++.++.+ |. + .++|++|++++|+ +++|++|+|++|.+. .+.+..|.++++|++|+|++|++
T Consensus 16 ~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l 91 (455)
T 3v47_A 16 ICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQF 91 (455)
T ss_dssp ECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTT
T ss_pred CcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCcc
Confidence 3455666643 33 2 2678888888875 457888888888886 44567789999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchH-HhccccccceeeccCCccc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRA-IGNLSQSMEIFWMHSCNIS 148 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~~l~~l~l~~n~~~ 148 (628)
+++.|..|+++++|++|++++|.++...+. ...+.++++|++|++++|.+++..|.. +..++ .|+.|++++|.+.
T Consensus 92 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~---~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~-~L~~L~L~~n~l~ 167 (455)
T 3v47_A 92 LQLETGAFNGLANLEVLTLTQCNLDGAVLS---GNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMR-RFHVLDLTFNKVK 167 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTSCCBTHHHH---SSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCT-TCCEEECTTCCBS
T ss_pred CccChhhccCcccCCEEeCCCCCCCccccC---cccccCcccCCEEECCCCccCccCcccccCCCC-cccEEeCCCCccc
Confidence 998899999999999999999988752110 123778899999999999999887776 66665 7999999999999
Q ss_pred ccCCccccCC--CCCCEEEccCCcCCcccccc--------ccCCCCCCEeecccCcccccCCccccCC---CCCCEEEcc
Q 037488 149 GGIPEEISNL--TNLIAIYLGGNKLNGSIPIA--------LGKLQKLQLLNLEYNQLEGSIPDDLCRL---AALFQLDLG 215 (628)
Q Consensus 149 ~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~--------~~~l~~L~~L~L~~n~l~~~~p~~~~~l---~~L~~L~L~ 215 (628)
+..+..+..+ .+|+.|++++|.+.+..+.. +..+++|++|++++|++.+..|..+... ++|+.|+++
T Consensus 168 ~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~ 247 (455)
T 3v47_A 168 SICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILS 247 (455)
T ss_dssp CCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECT
T ss_pred ccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeec
Confidence 8888888776 68899999999988655433 3366889999999999988777766543 788999999
Q ss_pred CCcCccc----------CCCCccC--CCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccE
Q 037488 216 SNKLSGF----------VPASFGN--LTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIK 282 (628)
Q Consensus 216 ~n~l~~~----------~~~~~~~--l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 282 (628)
+|.+.+. .+..+.. .++|+.|++++|.++++ |..+..+++|++|++++|.+++..|..|..+++|++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 327 (455)
T 3v47_A 248 NSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLK 327 (455)
T ss_dssp TCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred cccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCE
Confidence 8865432 1222332 36899999999999975 667888999999999999999988999999999999
Q ss_pred EEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcc
Q 037488 283 IDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKL 362 (628)
Q Consensus 283 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 362 (628)
|+|++|.+++..|..++.+++|++|++++|++++..|..+..+++|+.|++++|+++++.+..+..+++|+.|++++|++
T Consensus 328 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 328 LNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp EECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred EECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 99999999988899999999999999999999988899999999999999999999988888889999999999999999
Q ss_pred eecCCCCCccccc
Q 037488 363 EGEIPREGSFRNF 375 (628)
Q Consensus 363 ~~~~p~~~~~~~~ 375 (628)
++.+|....+..|
T Consensus 408 ~~~~~~~~~l~~~ 420 (455)
T 3v47_A 408 DCSCPRIDYLSRW 420 (455)
T ss_dssp CCCTTTTHHHHHH
T ss_pred ccCCCcchHHHHH
Confidence 9999865444333
No 16
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.1e-40 Score=369.63 Aligned_cols=348 Identities=20% Similarity=0.267 Sum_probs=299.2
Q ss_pred cCCCcccCCChhccCCCCCCEEecCccC------------------------------CCCCCEEEccCCcceecCCccc
Q 037488 4 SFNKLVGVVPTTIFNVSTLNSLYLQNVQ------------------------------LQNLEELLLWGNNFSGTIPSFI 53 (628)
Q Consensus 4 s~N~l~~~~p~~~~~l~~L~~L~l~~n~------------------------------l~~L~~L~ls~N~l~~~~p~~~ 53 (628)
+.|+|++ +|..|+++++|+.|+|++|+ +++|++|+|++|.+.+.+|..|
T Consensus 433 ~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l 511 (876)
T 4ecn_A 433 LTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFL 511 (876)
T ss_dssp CSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGG
T ss_pred ccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHH
Confidence 3588998 78899999999999999885 4558999999999999999999
Q ss_pred cCCCCCCEEeccCCc-ccc-cCccccCCC-------CCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCC
Q 037488 54 FNASKLSRLELQMNS-FYG-FIPNTFGNL-------RNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDG 124 (628)
Q Consensus 54 ~~l~~L~~L~L~~N~-l~~-~~~~~f~~l-------~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~ 124 (628)
.++++|+.|+|++|+ +++ .+|..|+++ ++|+.|+|++|.++.++. ...+.++++|++|+|++|.++
T Consensus 512 ~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~----~~~l~~L~~L~~L~Ls~N~l~- 586 (876)
T 4ecn_A 512 YDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPA----SASLQKMVKLGLLDCVHNKVR- 586 (876)
T ss_dssp GGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCC----HHHHTTCTTCCEEECTTSCCC-
T ss_pred hCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCC----hhhhhcCCCCCEEECCCCCcc-
Confidence 999999999999998 887 667655544 599999999999986542 015789999999999999999
Q ss_pred CCchHHhccccccceeeccCCcccccCCccccCCCC-CCEEEccCCcCCccccccccCCCC--CCEeecccCcccccCCc
Q 037488 125 ILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN-LIAIYLGGNKLNGSIPIALGKLQK--LQLLNLEYNQLEGSIPD 201 (628)
Q Consensus 125 ~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~-L~~L~L~~n~l~~~~p~~~~~l~~--L~~L~L~~n~l~~~~p~ 201 (628)
.+| .|+.++ .|+.|++++|.+. .+|..+..+++ |+.|+|++|.+. .+|..+..++. |+.|+|++|++.+.+|.
T Consensus 587 ~lp-~~~~L~-~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~ 662 (876)
T 4ecn_A 587 HLE-AFGTNV-KLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRN 662 (876)
T ss_dssp BCC-CCCTTS-EESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSS
T ss_pred cch-hhcCCC-cceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCcccc
Confidence 666 777775 7999999999999 78888999999 999999999998 77888877655 99999999999877663
Q ss_pred cc---c--CCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCC--------CCcEEEcCCCCCcC
Q 037488 202 DL---C--RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLK--------DILYLNLSSNFFTG 268 (628)
Q Consensus 202 ~~---~--~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~--------~L~~L~l~~n~l~~ 268 (628)
.. . .+++|+.|+|++|+++...+..+..+++|+.|+|++|+++.+|..++... +|++|+|++|.++
T Consensus 663 l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~- 741 (876)
T 4ecn_A 663 ISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT- 741 (876)
T ss_dssp CSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-
T ss_pred chhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-
Confidence 32 2 34589999999999996544455689999999999999999998776533 8999999999999
Q ss_pred CCCCccc--CCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCC------CcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 269 PLPLEIG--NLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEY------NRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 269 ~~~~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~------n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
.+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|++++|.+ +
T Consensus 742 ~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~ 819 (876)
T 4ecn_A 742 SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-R 819 (876)
T ss_dssp CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-C
T ss_pred cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-C
Confidence 5677776 99999999999999997 688889999999999976 788889999999999999999999999 5
Q ss_pred cCchhhhcCCCCCEEEccCCcceecC
Q 037488 341 IIPISLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 341 ~~~~~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
.+|..+. ++|+.|++++|++...-
T Consensus 820 ~Ip~~l~--~~L~~LdLs~N~l~~i~ 843 (876)
T 4ecn_A 820 KVDEKLT--PQLYILDIADNPNISID 843 (876)
T ss_dssp BCCSCCC--SSSCEEECCSCTTCEEE
T ss_pred ccCHhhc--CCCCEEECCCCCCCccC
Confidence 6666654 69999999999987543
No 17
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=350.77 Aligned_cols=365 Identities=19% Similarity=0.242 Sum_probs=191.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
||+|+|+|+. +|..+. ++|++|++++|+ +++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 5 l~ls~n~l~~-ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 81 (520)
T 2z7x_B 5 VDRSKNGLIH-VPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKL 81 (520)
T ss_dssp EECTTSCCSS-CCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCC
T ss_pred EecCCCCccc-cccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCce
Confidence 4677777775 444444 777777777775 45677777777777777777777777777777777777
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccccc--ceeeccCCcc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSM--EIFWMHSCNI 147 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l--~~l~l~~n~~ 147 (628)
+.+.+. .+++|++|++++|.++.++ .+..+.++++|++|++++|.+++ ..+..+. .+ +.+++++|.+
T Consensus 82 ~~lp~~---~l~~L~~L~L~~N~l~~~~----~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~-~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 82 VKISCH---PTVNLKHLDLSFNAFDALP----ICKEFGNMSQLKFLGLSTTHLEK---SSVLPIA-HLNISKVLLVLGET 150 (520)
T ss_dssp CEEECC---CCCCCSEEECCSSCCSSCC----CCGGGGGCTTCCEEEEEESSCCG---GGGGGGT-TSCEEEEEEEECTT
T ss_pred eecCcc---ccCCccEEeccCCcccccc----chhhhccCCcceEEEecCcccch---hhccccc-cceeeEEEeecccc
Confidence 764333 6777777777777776542 12356667777777777777654 2333332 34 6666666665
Q ss_pred --cccCCccccCC--------------------------C----------------------------------------
Q 037488 148 --SGGIPEEISNL--------------------------T---------------------------------------- 159 (628)
Q Consensus 148 --~~~~~~~~~~l--------------------------~---------------------------------------- 159 (628)
.+..|..+..+ +
T Consensus 151 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~ 230 (520)
T 2z7x_B 151 YGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNI 230 (520)
T ss_dssp TTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEE
T ss_pred cccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhcccccc
Confidence 44444433332 2
Q ss_pred -----------------CCCEEEccCCcCCccccccc-----cCCCCCCEeecccCcccccCC-ccccCC---CCCCEEE
Q 037488 160 -----------------NLIAIYLGGNKLNGSIPIAL-----GKLQKLQLLNLEYNQLEGSIP-DDLCRL---AALFQLD 213 (628)
Q Consensus 160 -----------------~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~n~l~~~~p-~~~~~l---~~L~~L~ 213 (628)
+|+.|++++|++.+.+|..+ +.+++|+.+++++|.+ .+| ..+..+ .+|+.|+
T Consensus 231 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~ 308 (520)
T 2z7x_B 231 ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFT 308 (520)
T ss_dssp EEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEE
T ss_pred ccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEE
Confidence 34444444444444444444 4444444444444444 122 111111 2233333
Q ss_pred ccCCcCcccCCCCccCCCCCcEEEccCCcCCc-CCCCccCCCCCcEEEcCCCCCcC--CCCCcccCCccccEEEcCCCcC
Q 037488 214 LGSNKLSGFVPASFGNLTNLRSLHLGSNQITS-IPSTLLNLKDILYLNLSSNFFTG--PLPLEIGNLKVLIKIDLSMNNF 290 (628)
Q Consensus 214 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~Ls~N~l 290 (628)
+++|.+.... .+..+++|++|++++|++++ +|..+..+++|++|++++|.+++ ..|..+..+++|++|++++|.+
T Consensus 309 l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l 386 (520)
T 2z7x_B 309 VSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV 386 (520)
T ss_dssp EESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCC
T ss_pred cCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcC
Confidence 3333332111 11344555555555555554 44445555555555555555553 2233455555555555555555
Q ss_pred CCCCcc-ccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC
Q 037488 291 SGVIPI-TIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE 369 (628)
Q Consensus 291 ~~~~p~-~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 369 (628)
++.+|. .+..+++|++|++++|++++..|..+. ++|+.|++++|+++ .+|..+..+++|+.|++++|++++ +|..
T Consensus 387 ~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~-l~~~ 462 (520)
T 2z7x_B 387 SYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLKS-VPDG 462 (520)
T ss_dssp BCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CCTT
T ss_pred CcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCCc-cCHH
Confidence 542332 244455555555555555444443332 45555555555555 233333355555555555555552 2221
Q ss_pred --CcccccccccccCCCccc
Q 037488 370 --GSFRNFLAESFKGNELLC 387 (628)
Q Consensus 370 --~~~~~~~~~~~~~~~~~~ 387 (628)
..+..+....+.+|+..|
T Consensus 463 ~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 463 IFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp TTTTCTTCCEEECCSSCBCC
T ss_pred HhccCCcccEEECcCCCCcc
Confidence 123334444444555444
No 18
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=356.41 Aligned_cols=359 Identities=22% Similarity=0.283 Sum_probs=291.4
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|+|++|+++++.|..|.++++|++|++++|+ +++|++|++++|.+++..+..|.++++|++|++++|.+
T Consensus 57 L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l 136 (570)
T 2z63_A 57 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 136 (570)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCcc
Confidence 5899999999999999999999999999985 46799999999999877777799999999999999999
Q ss_pred ccc-CccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCC----cEEEcccCCCCCCCc-----------------
Q 037488 70 YGF-IPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYL----KYFSFSNNSLDGILP----------------- 127 (628)
Q Consensus 70 ~~~-~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L----~~L~l~~n~l~~~~p----------------- 127 (628)
+++ .|..|+++++|+.|++++|.++..++. .+..+++| +.|++++|.+.++.|
T Consensus 137 ~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~-----~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~~n~ 211 (570)
T 2z63_A 137 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT-----DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNF 211 (570)
T ss_dssp CCCCCCGGGGGCTTCCEEECTTSCCCEECGG-----GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCC
T ss_pred ceecChhhhcccCCCCEEeCcCCccceecHH-----HccchhccchhhhhcccCCCCceecCHHHhccCcceeEeccccc
Confidence 875 488999999999999999988765421 22233333 344444444433322
Q ss_pred ----------------------------------------------------------------hHHhccccccceeecc
Q 037488 128 ----------------------------------------------------------------RAIGNLSQSMEIFWMH 143 (628)
Q Consensus 128 ----------------------------------------------------------------~~~~~l~~~l~~l~l~ 143 (628)
..+..++ .++.++++
T Consensus 212 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~-~L~~L~l~ 290 (570)
T 2z63_A 212 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLT-NVSSFSLV 290 (570)
T ss_dssp SCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGT-TCSEEEEE
T ss_pred ccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcC-cccEEEec
Confidence 2222222 45566666
Q ss_pred CCcccccCCccccCCCCCCEEEccCCcCC---------------------ccccccccCCCCCCEeecccCcccccC--C
Q 037488 144 SCNISGGIPEEISNLTNLIAIYLGGNKLN---------------------GSIPIALGKLQKLQLLNLEYNQLEGSI--P 200 (628)
Q Consensus 144 ~n~~~~~~~~~~~~l~~L~~L~L~~n~l~---------------------~~~p~~~~~l~~L~~L~L~~n~l~~~~--p 200 (628)
+|.+. .+|..+..+ +|+.|++++|.+. +..+. ..+++|++|++++|++.+.. |
T Consensus 291 ~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~ 366 (570)
T 2z63_A 291 SVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCS 366 (570)
T ss_dssp SCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEE
T ss_pred Cccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCcccccc
Confidence 66665 355555555 5555555555554 32222 57789999999999988654 6
Q ss_pred ccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC--CccCCCCCcEEEcCCCCCcCCCCCcccCCc
Q 037488 201 DDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS--TLLNLKDILYLNLSSNFFTGPLPLEIGNLK 278 (628)
Q Consensus 201 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 278 (628)
..+..+++|++|++++|.+.+..+. +..+++|+.|++++|.+..++. .+..+++|++|++++|.+++..|..+..++
T Consensus 367 ~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 445 (570)
T 2z63_A 367 QSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445 (570)
T ss_dssp HHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred ccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC
Confidence 7788999999999999999876655 9999999999999999988643 677899999999999999999999999999
Q ss_pred cccEEEcCCCcCC-CCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEc
Q 037488 279 VLIKIDLSMNNFS-GVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINV 357 (628)
Q Consensus 279 ~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l 357 (628)
+|+.|++++|.++ +.+|..+..+++|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|++
T Consensus 446 ~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 525 (570)
T 2z63_A 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWL 525 (570)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEEC
T ss_pred cCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEe
Confidence 9999999999997 578899999999999999999999888999999999999999999999998888999999999999
Q ss_pred cCCcceecCCCCC
Q 037488 358 SFNKLEGEIPREG 370 (628)
Q Consensus 358 ~~N~l~~~~p~~~ 370 (628)
++|++++.+|...
T Consensus 526 ~~N~~~~~~~~~~ 538 (570)
T 2z63_A 526 HTNPWDCSCPRID 538 (570)
T ss_dssp CSSCBCCCTTTTH
T ss_pred cCCcccCCCcchH
Confidence 9999999988643
No 19
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.5e-38 Score=347.49 Aligned_cols=350 Identities=17% Similarity=0.204 Sum_probs=230.9
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
+|+++|++++ +|..+. ++|+.|++++|+ +++|++|+|++|.++++.|..|.++++|++|+|++|++
T Consensus 36 l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 112 (562)
T 3a79_B 36 VDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRL 112 (562)
T ss_dssp EECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCC
T ss_pred EEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcC
Confidence 4788999997 554553 788888888886 45788888888888888888888888888888888888
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcc--
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNI-- 147 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~-- 147 (628)
+.+.+. .+++|++|++++|+++.++. +..+.++++|++|++++|.+++.....+..+ .++.+++++|.+
T Consensus 113 ~~lp~~---~l~~L~~L~Ls~N~l~~l~~----p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L--~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 113 QNISCC---PMASLRHLDLSFNDFDVLPV----CKEFGNLTKLTFLGLSAAKFRQLDLLPVAHL--HLSCILLDLVSYHI 183 (562)
T ss_dssp CEECSC---CCTTCSEEECCSSCCSBCCC----CGGGGGCTTCCEEEEECSBCCTTTTGGGTTS--CEEEEEEEESSCCC
T ss_pred CccCcc---ccccCCEEECCCCCccccCc----hHhhcccCcccEEecCCCccccCchhhhhhc--eeeEEEeecccccc
Confidence 875443 78888888888888877542 2457788888888888888876332222222 248888888888
Q ss_pred cccCCccccCCC--------------------------------------------------------------------
Q 037488 148 SGGIPEEISNLT-------------------------------------------------------------------- 159 (628)
Q Consensus 148 ~~~~~~~~~~l~-------------------------------------------------------------------- 159 (628)
++..|..+..+.
T Consensus 184 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~ 263 (562)
T 3a79_B 184 KGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTW 263 (562)
T ss_dssp CSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECH
T ss_pred cccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcH
Confidence 666665555433
Q ss_pred -------------CCCEEEccCCcCCccccccc-----cCCCC--------------------------CCEeecccCcc
Q 037488 160 -------------NLIAIYLGGNKLNGSIPIAL-----GKLQK--------------------------LQLLNLEYNQL 195 (628)
Q Consensus 160 -------------~L~~L~L~~n~l~~~~p~~~-----~~l~~--------------------------L~~L~L~~n~l 195 (628)
+|+.|++++|.+.+.+|..+ ..++. |+.|++++|.+
T Consensus 264 ~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~ 343 (562)
T 3a79_B 264 KCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPF 343 (562)
T ss_dssp HHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCC
T ss_pred HHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCc
Confidence 34444444444444444433 22221 33333333333
Q ss_pred cccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCC---CCccCCCCCcEEEcCCCCCcC-CCC
Q 037488 196 EGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP---STLLNLKDILYLNLSSNFFTG-PLP 271 (628)
Q Consensus 196 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp---~~~~~l~~L~~L~l~~n~l~~-~~~ 271 (628)
.... ....+++|++|++++|++++..|..+..+++|+.|++++|++++++ ..+..+++|++|++++|.+++ .++
T Consensus 344 ~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 421 (562)
T 3a79_B 344 IHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYD 421 (562)
T ss_dssp CCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSS
T ss_pred cccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccCh
Confidence 2110 0145667777777777777666667777777777777777777654 345667777777777777766 333
Q ss_pred CcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCC
Q 037488 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLD 351 (628)
Q Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 351 (628)
..+..+++|+.|++++|++++..|..+. ++|++|++++|+++ .+|..+..+++|+.|++++|+++++.+..+..+++
T Consensus 422 ~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~ 498 (562)
T 3a79_B 422 RTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTS 498 (562)
T ss_dssp CCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTT
T ss_pred hhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCC
Confidence 4466677777777777777665554433 56777777777776 45555557777777777777777544444667777
Q ss_pred CCEEEccCCcceecCC
Q 037488 352 LKDINVSFNKLEGEIP 367 (628)
Q Consensus 352 L~~l~l~~N~l~~~~p 367 (628)
|+.|++++|++.+.++
T Consensus 499 L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 499 LQYIWLHDNPWDCTCP 514 (562)
T ss_dssp CCCEECCSCCBCCCHH
T ss_pred CCEEEecCCCcCCCcc
Confidence 7777777777766544
No 20
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=9.3e-39 Score=340.27 Aligned_cols=353 Identities=20% Similarity=0.172 Sum_probs=305.1
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEEeccCCccc-ccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 33 QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFY-GFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 33 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
++|++|+|++|.+++..|..|.++++|++|+|++|.+. .+.+.+|.++++|++|+|++|.++...+ ..+.++++
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~-----~~~~~l~~ 104 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLET-----GAFNGLAN 104 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECT-----TTTTTCTT
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccCh-----hhccCccc
Confidence 57999999999999999999999999999999999997 4557889999999999999999987644 35889999
Q ss_pred CcEEEcccCCCCCCCchH--HhccccccceeeccCCcccccCCcc-ccCCCCCCEEEccCCcCCccccccccCC--CCCC
Q 037488 112 LKYFSFSNNSLDGILPRA--IGNLSQSMEIFWMHSCNISGGIPEE-ISNLTNLIAIYLGGNKLNGSIPIALGKL--QKLQ 186 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~--~~~l~~~l~~l~l~~n~~~~~~~~~-~~~l~~L~~L~L~~n~l~~~~p~~~~~l--~~L~ 186 (628)
|++|++++|.+++..+.. |..++ .|+.|++++|.+.+..|.. +.++++|+.|++++|.+.+..|..+..+ .+|+
T Consensus 105 L~~L~L~~n~l~~~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~ 183 (455)
T 3v47_A 105 LEVLTLTQCNLDGAVLSGNFFKPLT-SLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFT 183 (455)
T ss_dssp CCEEECTTSCCBTHHHHSSTTTTCT-TCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEE
T ss_pred CCEEeCCCCCCCccccCcccccCcc-cCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccc
Confidence 999999999998755544 77775 7999999999999887876 8999999999999999998888888766 7899
Q ss_pred EeecccCcccccCCcc--------ccCCCCCCEEEccCCcCcccCCCCccCC---CCCcEEEccCCcCCcCC--------
Q 037488 187 LLNLEYNQLEGSIPDD--------LCRLAALFQLDLGSNKLSGFVPASFGNL---TNLRSLHLGSNQITSIP-------- 247 (628)
Q Consensus 187 ~L~L~~n~l~~~~p~~--------~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~lp-------- 247 (628)
.|++++|.+.+..+.. +..+++|++|++++|++++..|..+... ++|+.|++++|.+....
T Consensus 184 ~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~ 263 (455)
T 3v47_A 184 LLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKD 263 (455)
T ss_dssp EEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCC
T ss_pred ccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhcc
Confidence 9999999998655433 3366899999999999988777666544 78999999988654321
Q ss_pred ---CCcc--CCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhh
Q 037488 248 ---STLL--NLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSI 322 (628)
Q Consensus 248 ---~~~~--~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~ 322 (628)
..+. ..++|++|++++|.+++..|..+..+++|+.|++++|.+++..|..++.+++|++|++++|++++..|..+
T Consensus 264 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 343 (455)
T 3v47_A 264 PDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMF 343 (455)
T ss_dssp CCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGG
T ss_pred CcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHh
Confidence 1111 23689999999999999999999999999999999999999889999999999999999999998889999
Q ss_pred cCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC-CcccccccccccCCCcccCCCC
Q 037488 323 GDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE-GSFRNFLAESFKGNELLCGMPN 391 (628)
Q Consensus 323 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~ 391 (628)
..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..+.. .....+....+.+|+..|..|.
T Consensus 344 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 344 ENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCc
Confidence 99999999999999999998999999999999999999999755543 3456777888889998887654
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=1.3e-38 Score=347.62 Aligned_cols=367 Identities=21% Similarity=0.239 Sum_probs=296.0
Q ss_pred cccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCccc
Q 037488 2 AFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFY 70 (628)
Q Consensus 2 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 70 (628)
|.++|.++.+++ .+. ++|++|++++|+ +++|++|+|++|.+++..|..|.++++|++|+|++|+++
T Consensus 11 ~~~~~~l~~ip~-~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~ 87 (549)
T 2z81_A 11 DGRSRSFTSIPS-GLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLS 87 (549)
T ss_dssp ECTTSCCSSCCS-CCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ECCCCccccccc-cCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccC
Confidence 567888986554 443 799999999986 567999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCC-CCCCCchHHhccccccceeeccCCcccc
Q 037488 71 GFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNS-LDGILPRAIGNLSQSMEIFWMHSCNISG 149 (628)
Q Consensus 71 ~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~~l~~l~l~~n~~~~ 149 (628)
++.+.+|+++++|++|++++|.++.... ...+.++++|++|++++|. +..+.+..|..++ .|+.|++++|.+.+
T Consensus 88 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~----~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~-~L~~L~L~~n~l~~ 162 (549)
T 2z81_A 88 SLSSSWFGPLSSLKYLNLMGNPYQTLGV----TSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLT-SLNELEIKALSLRN 162 (549)
T ss_dssp SCCHHHHTTCTTCCEEECTTCCCSSSCS----SCSCTTCTTCCEEEEEESSSCCEECTTTTTTCC-EEEEEEEEETTCCE
T ss_pred ccCHHHhccCCCCcEEECCCCcccccch----hhhhhccCCccEEECCCCccccccCHhhhhccc-ccCeeeccCCcccc
Confidence 9999899999999999999999986431 2358899999999999998 4544556788876 79999999999999
Q ss_pred cCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccC--Ccc-ccC---------------------
Q 037488 150 GIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSI--PDD-LCR--------------------- 205 (628)
Q Consensus 150 ~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~--p~~-~~~--------------------- 205 (628)
..|..+..+++|+.|++++|.+....+..+..+++|++|++++|++.+.. |.. ...
T Consensus 163 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~ 242 (549)
T 2z81_A 163 YQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNE 242 (549)
T ss_dssp ECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHH
T ss_pred cChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHH
Confidence 99999999999999999999987443333467899999999999987631 100 001
Q ss_pred ------------------------------------------------------------------CCCCCEEEccCCcC
Q 037488 206 ------------------------------------------------------------------LAALFQLDLGSNKL 219 (628)
Q Consensus 206 ------------------------------------------------------------------l~~L~~L~L~~n~l 219 (628)
..+|+.|++++|++
T Consensus 243 l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l 322 (549)
T 2z81_A 243 LLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKV 322 (549)
T ss_dssp HHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCC
T ss_pred HHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCcc
Confidence 12455555555555
Q ss_pred cccCCCCc-cCCCCCcEEEccCCcCCc-CC---CCccCCCCCcEEEcCCCCCcCCCC--CcccCCccccEEEcCCCcCCC
Q 037488 220 SGFVPASF-GNLTNLRSLHLGSNQITS-IP---STLLNLKDILYLNLSSNFFTGPLP--LEIGNLKVLIKIDLSMNNFSG 292 (628)
Q Consensus 220 ~~~~~~~~-~~l~~L~~L~L~~n~l~~-lp---~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~ 292 (628)
.. +|..+ ..+++|++|++++|++++ +| ..+..+++|++|++++|.+++..+ ..+..+++|++|++++|+++
T Consensus 323 ~~-ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~- 400 (549)
T 2z81_A 323 FL-VPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH- 400 (549)
T ss_dssp CC-CCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-
T ss_pred cc-CCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-
Confidence 43 34333 578999999999999986 33 346788999999999999986543 45889999999999999998
Q ss_pred CCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcc
Q 037488 293 VIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSF 372 (628)
Q Consensus 293 ~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~ 372 (628)
.+|..+..+++|++|++++|+++ .+|..+ .++|+.|++++|++++.. ..+++|+.|++++|+++ .+|....+
T Consensus 401 ~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~~~l 472 (549)
T 2z81_A 401 PMPDSCQWPEKMRFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDASLF 472 (549)
T ss_dssp CCCSCCCCCTTCCEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCGGGC
T ss_pred cCChhhcccccccEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCcccC
Confidence 57888889999999999999997 445443 268999999999998754 47889999999999998 67765555
Q ss_pred cccccccccCCCcc
Q 037488 373 RNFLAESFKGNELL 386 (628)
Q Consensus 373 ~~~~~~~~~~~~~~ 386 (628)
..+......+|...
T Consensus 473 ~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 473 PVLLVMKISRNQLK 486 (549)
T ss_dssp TTCCEEECCSSCCC
T ss_pred ccCCEEecCCCccC
Confidence 66666666666443
No 22
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-38 Score=359.87 Aligned_cols=375 Identities=23% Similarity=0.237 Sum_probs=272.8
Q ss_pred cccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCccee-cCCccccCCCCCCEEeccCCcc
Q 037488 2 AFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSG-TIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 2 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l 69 (628)
|.++++++.+++ -.++|+.|+|++|+ +++|++|+|++|.+.+ +.|..|.++++|++|+|++|++
T Consensus 10 dcs~~~L~~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l 85 (844)
T 3j0a_A 10 FYRFCNLTQVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKI 85 (844)
T ss_dssp EESCCCSSCCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCC
T ss_pred EccCCCCCCCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcC
Confidence 567889997554 46899999999996 5679999999996544 4488999999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCc-hHHhccccccceeeccCCccc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILP-RAIGNLSQSMEIFWMHSCNIS 148 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~~l~~l~l~~n~~~ 148 (628)
.++.|++|+++++|++|+|++|.++...+. ...+.++++|++|++++|.+++..+ ..|..++ .|+.|++++|.+.
T Consensus 86 ~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~---~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~-~L~~L~Ls~N~i~ 161 (844)
T 3j0a_A 86 YFLHPDAFQGLFHLFELRLYFCGLSDAVLK---DGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLN-SLKSIDFSSNQIF 161 (844)
T ss_dssp CEECTTSSCSCSSCCCEECTTCCCSSCCST---TCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCS-SCCEEEEESSCCC
T ss_pred cccCHhHccCCcccCEeeCcCCCCCccccc---CccccccCCCCEEECCCCcccccccchhHhhCC-CCCEEECCCCcCC
Confidence 999999999999999999999999874321 1247899999999999999998765 5788886 7999999999998
Q ss_pred ccCCccccCC--CCCCEEEccCCcCCccccccccC---------------------------------------------
Q 037488 149 GGIPEEISNL--TNLIAIYLGGNKLNGSIPIALGK--------------------------------------------- 181 (628)
Q Consensus 149 ~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~--------------------------------------------- 181 (628)
+..+..+..+ ++|+.|++++|.+.+..|..++.
T Consensus 162 ~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~ 241 (844)
T 3j0a_A 162 LVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHH 241 (844)
T ss_dssp CCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSS
T ss_pred eeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccc
Confidence 8777766554 44444444444444333222221
Q ss_pred -----------------------CCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEc
Q 037488 182 -----------------------LQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHL 238 (628)
Q Consensus 182 -----------------------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (628)
.++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 242 ~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L 321 (844)
T 3j0a_A 242 IMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNL 321 (844)
T ss_dssp CCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEE
T ss_pred cccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEEC
Confidence 146777777777777777777778888888888888888777778888888888888
Q ss_pred cCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCc------------------c---
Q 037488 239 GSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIP------------------I--- 296 (628)
Q Consensus 239 ~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p------------------~--- 296 (628)
++|.++.+ |..+..+++|++|++++|.+++..+..|..+++|+.|+|++|.+++... .
T Consensus 322 s~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~ 401 (844)
T 3j0a_A 322 SYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINL 401 (844)
T ss_dssp ESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCT
T ss_pred CCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCccccccccc
Confidence 88888776 5567778888888888888887777778888888888888887764211 0
Q ss_pred -------------------ccCCCCCCCEEeCCCCcCcccC------------------------------ChhhcCCCC
Q 037488 297 -------------------TIGYLKDLQYLFLEYNRLQGSI------------------------------PDSIGDLIN 327 (628)
Q Consensus 297 -------------------~~~~l~~L~~L~l~~n~~~~~~------------------------------~~~~~~l~~ 327 (628)
.+..+++|++|++++|++++.. +..|.++++
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 1224556666666666665322 223455566
Q ss_pred CCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccccccccccCCCc
Q 037488 328 LKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNEL 385 (628)
Q Consensus 328 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~ 385 (628)
|+.|+|++|.++++.|..|..+++|+.|++++|++++..+.... ..+....+.+|..
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l 538 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQL 538 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECC
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcC
Confidence 66666666666666666677777777777777777754443222 3344444444433
No 23
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=340.05 Aligned_cols=304 Identities=23% Similarity=0.206 Sum_probs=218.0
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCc
Q 037488 34 NLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLK 113 (628)
Q Consensus 34 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 113 (628)
++++|+|++|.++++.|..|.++++|++|+|++|.++++.|.+|.++++|+.|+|++|.++.+++. .|.++++|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l~~L~ 107 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLG-----VFTGLSNLT 107 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTT-----SSTTCTTCC
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcc-----cccCCCCCC
Confidence 455555555555555555555666666666666666555555566666666666666655554332 245555555
Q ss_pred EEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccC
Q 037488 114 YFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYN 193 (628)
Q Consensus 114 ~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 193 (628)
+|++++|.+. +..+..|..+++|+.|++++|.+.+..+..|..+++|++|++++|
T Consensus 108 ~L~Ls~n~i~-------------------------~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 162 (477)
T 2id5_A 108 KLDISENKIV-------------------------ILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKC 162 (477)
T ss_dssp EEECTTSCCC-------------------------EECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESC
T ss_pred EEECCCCccc-------------------------cCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCC
Confidence 5555555554 444556667777777777777777766777777778888888888
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC-cCCCCccCCCCCcEEEcCCCCCcCCCCC
Q 037488 194 QLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-SIPSTLLNLKDILYLNLSSNFFTGPLPL 272 (628)
Q Consensus 194 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 272 (628)
++.+..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|... .+|.......+|++|++++|.++...+.
T Consensus 163 ~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 242 (477)
T 2id5_A 163 NLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL 242 (477)
T ss_dssp CCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH
T ss_pred cCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH
Confidence 777665566777778888888888877777777778888888888776544 4666666666788888888888765556
Q ss_pred cccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCC
Q 037488 273 EIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDL 352 (628)
Q Consensus 273 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 352 (628)
.+..+++|+.|+|++|.+++..+..+..+++|++|+|++|++++..|..|..+++|+.|++++|.++++.+..|..+++|
T Consensus 243 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 322 (477)
T 2id5_A 243 AVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNL 322 (477)
T ss_dssp HHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGC
T ss_pred HhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCccc
Confidence 67788888888888888887777778888888888888888887778888888888888888888887777777888888
Q ss_pred CEEEccCCcceecCC
Q 037488 353 KDINVSFNKLEGEIP 367 (628)
Q Consensus 353 ~~l~l~~N~l~~~~p 367 (628)
+.|++++|++.+..+
T Consensus 323 ~~L~l~~N~l~c~c~ 337 (477)
T 2id5_A 323 ETLILDSNPLACDCR 337 (477)
T ss_dssp CEEECCSSCEECSGG
T ss_pred CEEEccCCCccCccc
Confidence 888888888876554
No 24
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4e-37 Score=341.97 Aligned_cols=383 Identities=21% Similarity=0.263 Sum_probs=284.8
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
||||+|+|+++.|.+|.++++|++|+|++|+ +++|++|+|++|+++++.+..|.++++|++|+|++|++
T Consensus 57 LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l 136 (635)
T 4g8a_A 57 LDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNL 136 (635)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCC
T ss_pred EEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcC
Confidence 6899999999999999999999999999996 56899999999999998889999999999999999999
Q ss_pred cccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccc---ccceeeccCCc
Q 037488 70 YGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQ---SMEIFWMHSCN 146 (628)
Q Consensus 70 ~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~---~l~~l~l~~n~ 146 (628)
+++.+.+|+++++|++|++++|.++.... ...+.++++|++|++++|+++++.+..|..+.. ....++++.|.
T Consensus 137 ~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~----~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 137 ASLENFPIGHLKTLKELNVAHNLIQSFKL----PEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp CCSTTCCCTTCTTCCEEECCSSCCCCCCC----CGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCCChhhhhcCcccCeeccccCccccCCC----chhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 99999999999999999999999987542 245788999999999999999888877654431 11122223222
Q ss_pred ccccCCc-------------------------------------------------------------------------
Q 037488 147 ISGGIPE------------------------------------------------------------------------- 153 (628)
Q Consensus 147 ~~~~~~~------------------------------------------------------------------------- 153 (628)
+....+.
T Consensus 213 l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~ 292 (635)
T 4g8a_A 213 MNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLD 292 (635)
T ss_dssp CCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCC
T ss_pred ccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhc
Confidence 2211110
Q ss_pred ------------------------------cccCCCCCCEEEccCCcCCccccc-------------------cccCCCC
Q 037488 154 ------------------------------EISNLTNLIAIYLGGNKLNGSIPI-------------------ALGKLQK 184 (628)
Q Consensus 154 ------------------------------~~~~l~~L~~L~L~~n~l~~~~p~-------------------~~~~l~~ 184 (628)
.+....+|+.|++.+|.+....+. ....+++
T Consensus 293 ~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~ 372 (635)
T 4g8a_A 293 YYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPS 372 (635)
T ss_dssp SCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTT
T ss_pred ccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccc
Confidence 112223444444444444322111 1123445
Q ss_pred CCEeecccCcccc--cCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCC--CCccCCCCCcEEE
Q 037488 185 LQLLNLEYNQLEG--SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP--STLLNLKDILYLN 260 (628)
Q Consensus 185 L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp--~~~~~l~~L~~L~ 260 (628)
|+.|++++|.+.. ..+..+..+.+|+.|++..|.+.. .+..+..+++|+.++++.|.....+ ..+..+.+++.++
T Consensus 373 L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ 451 (635)
T 4g8a_A 373 LEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLD 451 (635)
T ss_dssp CCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEE
T ss_pred cccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccc
Confidence 5555555555431 223334445555555555555443 3445667778888888777765542 3456788889999
Q ss_pred cCCCCCcCCCCCcccCCccccEEEcCCCcC-CCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCccc
Q 037488 261 LSSNFFTGPLPLEIGNLKVLIKIDLSMNNF-SGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~ 339 (628)
++.|.+.+..+..+..++.|+.|++++|.+ .+..|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|+|+
T Consensus 452 ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~ 531 (635)
T 4g8a_A 452 ISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 531 (635)
T ss_dssp CTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCC
T ss_pred ccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCC
Confidence 999998888888888899999999999874 4456788888999999999999999888889999999999999999999
Q ss_pred ccCchhhhcCCCCCEEEccCCcceecCCCCCc-c-cccccccccCCCcccC
Q 037488 340 GIIPISLEKLLDLKDINVSFNKLEGEIPREGS-F-RNFLAESFKGNELLCG 388 (628)
Q Consensus 340 ~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~-~-~~~~~~~~~~~~~~~~ 388 (628)
++.+..|..+++|+.|++++|++++.+|.... + ..+......+|+..|.
T Consensus 532 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 532 SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp BCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 88888899999999999999999887776432 2 4566777888888885
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=336.72 Aligned_cols=347 Identities=21% Similarity=0.206 Sum_probs=269.1
Q ss_pred CEEecCccCC--------CCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCcccc
Q 037488 23 NSLYLQNVQL--------QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLT 94 (628)
Q Consensus 23 ~~L~l~~n~l--------~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~ 94 (628)
+.|++++|++ ++|++|+|++|.+++..|..|.++++|++|+|++|+++++.|++|+++++|++|+|++|+++
T Consensus 3 ~~l~ls~n~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 82 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLSQKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV 82 (520)
T ss_dssp CEEECTTSCCSSCCCSCCTTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC
T ss_pred ceEecCCCCcccccccccccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee
Confidence 4567777764 47999999999999888899999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccccCCCCCcEEEcccCCCCCC-CchHHhccccccceeeccCCcccccCCccccCCCCC--CEEEccCCcC
Q 037488 95 SSTPKLNFLSSLSNCKYLKYFSFSNNSLDGI-LPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNL--IAIYLGGNKL 171 (628)
Q Consensus 95 ~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L--~~L~L~~n~l 171 (628)
.++. . .+++|++|++++|.++++ .|..|+.++ .|+.|++++|.+.+ ..+..+++| +.|++++|.+
T Consensus 83 ~lp~-------~-~l~~L~~L~L~~N~l~~~~~p~~~~~l~-~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 83 KISC-------H-PTVNLKHLDLSFNAFDALPICKEFGNMS-QLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp EEEC-------C-CCCCCSEEECCSSCCSSCCCCGGGGGCT-TCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTT
T ss_pred ecCc-------c-ccCCccEEeccCCccccccchhhhccCC-cceEEEecCcccch---hhccccccceeeEEEeecccc
Confidence 7543 2 789999999999999984 688999887 79999999999986 457778888 9999999998
Q ss_pred --CccccccccC--------------------------CCCCCEeecccCc-------ccccCCccccC-----------
Q 037488 172 --NGSIPIALGK--------------------------LQKLQLLNLEYNQ-------LEGSIPDDLCR----------- 205 (628)
Q Consensus 172 --~~~~p~~~~~--------------------------l~~L~~L~L~~n~-------l~~~~p~~~~~----------- 205 (628)
.+..|..+.. +++|+.|++++|. +.+.+| .+..
T Consensus 151 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~ 229 (520)
T 2z7x_B 151 YGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNN 229 (520)
T ss_dssp TTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEE
T ss_pred cccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccc
Confidence 6666655554 3344444444443 111111 1111
Q ss_pred ----------------CCCCCEEEccCCcCcccCCCCc-----cCCCCCcEEEccCCcC---------------------
Q 037488 206 ----------------LAALFQLDLGSNKLSGFVPASF-----GNLTNLRSLHLGSNQI--------------------- 243 (628)
Q Consensus 206 ----------------l~~L~~L~L~~n~l~~~~~~~~-----~~l~~L~~L~L~~n~l--------------------- 243 (628)
.++|++|++++|++++.+|..+ ..+++|+.+++++|.+
T Consensus 230 ~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l 309 (520)
T 2z7x_B 230 IETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTV 309 (520)
T ss_dssp EEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEE
T ss_pred cccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEc
Confidence 2256666666666665556555 5555555555555554
Q ss_pred -----CcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCC--CCccccCCCCCCCEEeCCCCcCcc
Q 037488 244 -----TSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSG--VIPITIGYLKDLQYLFLEYNRLQG 316 (628)
Q Consensus 244 -----~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~l~~n~~~~ 316 (628)
..++. ...+++|++|++++|.+++..|..++.+++|+.|++++|++++ .+|..++.+++|++|++++|++++
T Consensus 310 ~~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~ 388 (520)
T 2z7x_B 310 SGTRMVHMLC-PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSY 388 (520)
T ss_dssp ESSCCCCCCC-CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBC
T ss_pred CCCccccccc-hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCc
Confidence 33321 1578899999999999999889999999999999999999986 456778999999999999999997
Q ss_pred cCCh-hhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCC-CCcccccccccccCCCcc
Q 037488 317 SIPD-SIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPR-EGSFRNFLAESFKGNELL 386 (628)
Q Consensus 317 ~~~~-~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~~~~~ 386 (628)
.+|. .+..+++|+.|++++|.+++..|..+. ++|+.|++++|+++ .+|. ......+......+|...
T Consensus 389 ~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 389 DEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp CGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC
T ss_pred ccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC
Confidence 4554 588899999999999999877766553 79999999999998 5554 334556666666676543
No 26
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-37 Score=328.21 Aligned_cols=306 Identities=24% Similarity=0.204 Sum_probs=243.4
Q ss_pred cccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCccc
Q 037488 2 AFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFY 70 (628)
Q Consensus 2 ~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 70 (628)
+.++++++. +|..+. ++++.|+|++|+ +++|++|+|++|.++++.|..|.++++|++|+|++|+++
T Consensus 17 ~c~~~~l~~-ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 93 (477)
T 2id5_A 17 LCHRKRFVA-VPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK 93 (477)
T ss_dssp ECCSCCCSS-CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred EeCCCCcCc-CCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC
Confidence 446677775 444443 688999999986 467999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCccccc
Q 037488 71 GFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGG 150 (628)
Q Consensus 71 ~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~ 150 (628)
.+.+..|.++++|+.|+|++|.++...+ ..+.++++|++|++++|.+.++.+
T Consensus 94 ~~~~~~~~~l~~L~~L~Ls~n~i~~~~~-----~~~~~l~~L~~L~l~~n~l~~~~~----------------------- 145 (477)
T 2id5_A 94 LIPLGVFTGLSNLTKLDISENKIVILLD-----YMFQDLYNLKSLEVGDNDLVYISH----------------------- 145 (477)
T ss_dssp SCCTTSSTTCTTCCEEECTTSCCCEECT-----TTTTTCTTCCEEEECCTTCCEECT-----------------------
T ss_pred ccCcccccCCCCCCEEECCCCccccCCh-----hHccccccCCEEECCCCccceeCh-----------------------
Confidence 9988899999999999999999987654 357889999999999998875433
Q ss_pred CCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCC
Q 037488 151 IPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNL 230 (628)
Q Consensus 151 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 230 (628)
..|.++++|+.|++++|++++..+..+..+++|+.|++++|.+.+..+..|..+++|+.|++++|.+.+..|......
T Consensus 146 --~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~ 223 (477)
T 2id5_A 146 --RAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYG 223 (477)
T ss_dssp --TSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTT
T ss_pred --hhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccccC
Confidence 345566777777777777776655667777777777777777777666677777777788777777666666555555
Q ss_pred CCCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeC
Q 037488 231 TNLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFL 309 (628)
Q Consensus 231 ~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 309 (628)
.+|+.|++++|.++.+|. .+..+++|++|++++|.+++..+..|..+++|+.|+|++|++++..|..|..+++|++|++
T Consensus 224 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 303 (477)
T 2id5_A 224 LNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNV 303 (477)
T ss_dssp CCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEEC
T ss_pred ccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEEC
Confidence 678888888888887774 4566778888888888887777777888888888888888888777888888888888888
Q ss_pred CCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 310 EYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 310 ~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
++|++++..+..|..+++|+.|++++|.+..
T Consensus 304 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 304 SGNQLTTLEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp CSSCCSCCCGGGBSCGGGCCEEECCSSCEEC
T ss_pred CCCcCceeCHhHcCCCcccCEEEccCCCccC
Confidence 8888887666777888888888888888764
No 27
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.2e-36 Score=320.23 Aligned_cols=331 Identities=30% Similarity=0.457 Sum_probs=242.1
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC---------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ---------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYG 71 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~---------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 71 (628)
|++++|.+..+ | .+..+++|++|++++|+ +++|++|++++|.+++..+ +.++++|++|++++|.+++
T Consensus 51 L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 126 (466)
T 1o6v_A 51 LQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITD 126 (466)
T ss_dssp EECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred EecCCCCCccC-c-chhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCC
Confidence 35666777653 3 36777777777777775 3567777777777775544 7777777777777777776
Q ss_pred cCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccC
Q 037488 72 FIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGI 151 (628)
Q Consensus 72 ~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~ 151 (628)
+.+ |.++++|++|++++|.++.++ .+.++++|++|+++ |.+.+..+ +..++ .|+.|++++|.+.+.
T Consensus 127 ~~~--~~~l~~L~~L~l~~n~l~~~~-------~~~~l~~L~~L~l~-~~~~~~~~--~~~l~-~L~~L~l~~n~l~~~- 192 (466)
T 1o6v_A 127 IDP--LKNLTNLNRLELSSNTISDIS-------ALSGLTSLQQLSFG-NQVTDLKP--LANLT-TLERLDISSNKVSDI- 192 (466)
T ss_dssp CGG--GTTCTTCSEEEEEEEEECCCG-------GGTTCTTCSEEEEE-ESCCCCGG--GTTCT-TCCEEECCSSCCCCC-
T ss_pred ChH--HcCCCCCCEEECCCCccCCCh-------hhccCCcccEeecC-CcccCchh--hccCC-CCCEEECcCCcCCCC-
Confidence 543 777777777777777776542 36677777777775 44444332 55554 678888888877653
Q ss_pred CccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCC
Q 037488 152 PEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLT 231 (628)
Q Consensus 152 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 231 (628)
+.+..+++|+.|++++|.+.+..| ++.+++|++|++++|++.+. ..+..+++|+.|++++|.+++..+ +..++
T Consensus 193 -~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~ 265 (466)
T 1o6v_A 193 -SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLT 265 (466)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCT
T ss_pred -hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCC
Confidence 347778888888888888876554 66778888888888887743 357778888888888888876544 77788
Q ss_pred CCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCC
Q 037488 232 NLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEY 311 (628)
Q Consensus 232 ~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 311 (628)
+|+.|++++|.++.++. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..| +..+++|++|++++
T Consensus 266 ~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~ 340 (466)
T 1o6v_A 266 KLTELKLGANQISNISP-LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYN 340 (466)
T ss_dssp TCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCS
T ss_pred CCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCC
Confidence 88888888888887765 6677888888888888876544 6778888888888888877655 56778888888888
Q ss_pred CcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceec
Q 037488 312 NRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGE 365 (628)
Q Consensus 312 n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 365 (628)
|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|++++.
T Consensus 341 n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 341 NKVSDV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp SCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred CccCCc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 888754 457788888888888888877666 67788888888888887763
No 28
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-35 Score=309.19 Aligned_cols=313 Identities=19% Similarity=0.207 Sum_probs=275.7
Q ss_pred cCCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCC
Q 037488 30 VQLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNC 109 (628)
Q Consensus 30 n~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 109 (628)
..+.+++.|++++|.+..+.+..|.++++|++|+|++|.++++.+.+|.++++|++|++++|.++.+++. .+.++
T Consensus 42 ~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l 116 (390)
T 3o6n_A 42 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNV 116 (390)
T ss_dssp GGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTC
T ss_pred cccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHH-----HhcCC
Confidence 3478899999999999987777789999999999999999999999999999999999999999987653 47899
Q ss_pred CCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEee
Q 037488 110 KYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLN 189 (628)
Q Consensus 110 ~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 189 (628)
++|++|++++|.++.+.+..|..++ .|+.|++++|.+.+..+..|..+++|+.|++++|++++. .+..+++|+.|+
T Consensus 117 ~~L~~L~L~~n~l~~l~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~ 192 (390)
T 3o6n_A 117 PLLTVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHAN 192 (390)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEE
T ss_pred CCCCEEECCCCccCcCCHHHhcCCC-CCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceee
Confidence 9999999999999977766677775 799999999999988888999999999999999999864 366789999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCC
Q 037488 190 LEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGP 269 (628)
Q Consensus 190 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~ 269 (628)
+++|.+.+ +...++|+.|++++|.+...... ..++|+.|++++|.++.+ ..+..+++|++|++++|.+++.
T Consensus 193 l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~ 263 (390)
T 3o6n_A 193 VSYNLLST-----LAIPIAVEELDASHNSINVVRGP---VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKI 263 (390)
T ss_dssp CCSSCCSE-----EECCSSCSEEECCSSCCCEEECC---CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEE
T ss_pred cccccccc-----cCCCCcceEEECCCCeeeecccc---ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCc
Confidence 99998874 33456899999999999876433 247899999999999987 4678899999999999999988
Q ss_pred CCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcC
Q 037488 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKL 349 (628)
Q Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 349 (628)
.|..|..+++|+.|++++|++++ +|..+..+++|++|++++|++. .+|..+..+++|+.|++++|.++... +..+
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~~---~~~~ 338 (390)
T 3o6n_A 264 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTH 338 (390)
T ss_dssp ESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTT
T ss_pred ChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCccceeC---chhh
Confidence 89999999999999999999985 5666678999999999999998 56777888999999999999998653 6678
Q ss_pred CCCCEEEccCCcceec
Q 037488 350 LDLKDINVSFNKLEGE 365 (628)
Q Consensus 350 ~~L~~l~l~~N~l~~~ 365 (628)
++|+.|++++|++.+.
T Consensus 339 ~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 339 HTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCCSEEECCSSCEEHH
T ss_pred ccCCEEEcCCCCccch
Confidence 8999999999999864
No 29
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.2e-35 Score=314.62 Aligned_cols=337 Identities=26% Similarity=0.409 Sum_probs=286.7
Q ss_pred cCCCCCCEEecCccC---------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEE
Q 037488 17 FNVSTLNSLYLQNVQ---------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLG 87 (628)
Q Consensus 17 ~~l~~L~~L~l~~n~---------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~ 87 (628)
..+++|+.|+++++. +++|++|+|++|.+++..| +.++++|++|++++|+++++.+ |+++++|+.|+
T Consensus 43 ~~l~~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHHHTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hHhccccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 356789999998875 5689999999999987655 8999999999999999998766 99999999999
Q ss_pred ccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEcc
Q 037488 88 LNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLG 167 (628)
Q Consensus 88 L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~ 167 (628)
+++|.++..+ .+.++++|++|++++|.+.++ + .+..++ .|+.+.++ +.+.+.. .+..+++|+.|+++
T Consensus 119 L~~n~l~~~~-------~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~-~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~ 185 (466)
T 1o6v_A 119 LFNNQITDID-------PLKNLTNLNRLELSSNTISDI-S-ALSGLT-SLQQLSFG-NQVTDLK--PLANLTTLERLDIS 185 (466)
T ss_dssp CCSSCCCCCG-------GGTTCTTCSEEEEEEEEECCC-G-GGTTCT-TCSEEEEE-ESCCCCG--GGTTCTTCCEEECC
T ss_pred CCCCCCCCCh-------HHcCCCCCCEEECCCCccCCC-h-hhccCC-cccEeecC-CcccCch--hhccCCCCCEEECc
Confidence 9999998764 378899999999999999864 3 366665 78999986 4454432 38899999999999
Q ss_pred CCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCC
Q 037488 168 GNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP 247 (628)
Q Consensus 168 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp 247 (628)
+|.+.+. + .+..+++|++|++++|++.+..| +..+++|+.|++++|++++. +.+..+++|+.|++++|.++.++
T Consensus 186 ~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~ 259 (466)
T 1o6v_A 186 SNKVSDI-S-VLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLA 259 (466)
T ss_dssp SSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCcCCCC-h-hhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccch
Confidence 9999854 3 48899999999999999987654 77899999999999999864 46889999999999999999987
Q ss_pred CCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCC
Q 037488 248 STLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLIN 327 (628)
Q Consensus 248 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 327 (628)
. +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ ++.+++|+.|++++|++++..| +..+++
T Consensus 260 ~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~ 332 (466)
T 1o6v_A 260 P-LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTK 332 (466)
T ss_dssp G-GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTT
T ss_pred h-hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCcc
Confidence 6 7889999999999999997655 8899999999999999997655 7789999999999999987665 789999
Q ss_pred CCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccccccccccCCCcc
Q 037488 328 LKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELL 386 (628)
Q Consensus 328 L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~ 386 (628)
|+.|++++|.+++. ..+..+++|+.|++++|++++.+| ...+..+......+|+..
T Consensus 333 L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~~~ 388 (466)
T 1o6v_A 333 LQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQAWT 388 (466)
T ss_dssp CCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEEEE
T ss_pred CCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCccc
Confidence 99999999999876 468899999999999999998876 344455555555555443
No 30
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.7e-35 Score=323.24 Aligned_cols=353 Identities=21% Similarity=0.222 Sum_probs=273.5
Q ss_pred CCCCCCEEecCccCC--------CCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEcc
Q 037488 18 NVSTLNSLYLQNVQL--------QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLN 89 (628)
Q Consensus 18 ~l~~L~~L~l~~n~l--------~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~ 89 (628)
.+...+++++++|++ ++|++|+|++|.++++.|..|.++++|++|+|++|+++++.|++|.++++|++|+|+
T Consensus 29 ~~~~~~~l~ls~~~L~~ip~~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 108 (562)
T 3a79_B 29 SNELESMVDYSNRNLTHVPKDLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVS 108 (562)
T ss_dssp ----CCEEECTTSCCCSCCTTSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECT
T ss_pred ccCCCcEEEcCCCCCccCCCCCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECC
Confidence 344558899999875 479999999999999888999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCcccccccCCCCCcEEEcccCCCCCC-CchHHhccccccceeeccCCcccccCCccccCCCCC--CEEEc
Q 037488 90 DNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGI-LPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNL--IAIYL 166 (628)
Q Consensus 90 ~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L--~~L~L 166 (628)
+|.++.++. . .+++|++|++++|.++++ .|..|+.++ .|+.|++++|.+.+. .+..+++| +.|++
T Consensus 109 ~N~l~~lp~-------~-~l~~L~~L~Ls~N~l~~l~~p~~~~~l~-~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L 176 (562)
T 3a79_B 109 HNRLQNISC-------C-PMASLRHLDLSFNDFDVLPVCKEFGNLT-KLTFLGLSAAKFRQL---DLLPVAHLHLSCILL 176 (562)
T ss_dssp TSCCCEECS-------C-CCTTCSEEECCSSCCSBCCCCGGGGGCT-TCCEEEEECSBCCTT---TTGGGTTSCEEEEEE
T ss_pred CCcCCccCc-------c-ccccCCEEECCCCCccccCchHhhcccC-cccEEecCCCccccC---chhhhhhceeeEEEe
Confidence 999997653 1 789999999999999985 468899886 799999999999864 45555566 99999
Q ss_pred cCCcC--CccccccccCCC-------------------------------------------------------------
Q 037488 167 GGNKL--NGSIPIALGKLQ------------------------------------------------------------- 183 (628)
Q Consensus 167 ~~n~l--~~~~p~~~~~l~------------------------------------------------------------- 183 (628)
++|.+ ++..|..+..+.
T Consensus 177 ~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L 256 (562)
T 3a79_B 177 DLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTL 256 (562)
T ss_dssp EESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEE
T ss_pred ecccccccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEe
Confidence 99999 666666655543
Q ss_pred --------------------CCCEeecccCcccccCCccc-----cCC--------------------------CCCCEE
Q 037488 184 --------------------KLQLLNLEYNQLEGSIPDDL-----CRL--------------------------AALFQL 212 (628)
Q Consensus 184 --------------------~L~~L~L~~n~l~~~~p~~~-----~~l--------------------------~~L~~L 212 (628)
+|++|++++|++.+.+|..+ ..+ .+|+.|
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L 336 (562)
T 3a79_B 257 QHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKML 336 (562)
T ss_dssp EEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEE
T ss_pred cCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEE
Confidence 56666666666666666554 222 235556
Q ss_pred EccCCcCcccCCCCccCCCCCcEEEccCCcCCc-CCCCccCCCCCcEEEcCCCCCcCCC--CCcccCCccccEEEcCCCc
Q 037488 213 DLGSNKLSGFVPASFGNLTNLRSLHLGSNQITS-IPSTLLNLKDILYLNLSSNFFTGPL--PLEIGNLKVLIKIDLSMNN 289 (628)
Q Consensus 213 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-lp~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~l~~L~~L~Ls~N~ 289 (628)
++++|.+.... ....+++|++|++++|++++ +|..+..+++|++|++++|.+++.. |..+..+++|+.|++++|.
T Consensus 337 ~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~ 414 (562)
T 3a79_B 337 SISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS 414 (562)
T ss_dssp EEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSC
T ss_pred EccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCc
Confidence 66666554221 12677889999999999887 6778888899999999999888643 4568888999999999999
Q ss_pred CCCCCc-cccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCC
Q 037488 290 FSGVIP-ITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 290 l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
+++.+| ..+..+++|++|++++|++++..|..+. ++|+.|++++|+++. +|..+..+++|+.|++++|++++ +|.
T Consensus 415 l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~-ip~~~~~l~~L~~L~L~~N~l~~-l~~ 490 (562)
T 3a79_B 415 LNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMS-IPKDVTHLQALQELNVASNQLKS-VPD 490 (562)
T ss_dssp CBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCC-CCTTTTSSCCCSEEECCSSCCCC-CCT
T ss_pred CCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCcc-cChhhcCCCCCCEEECCCCCCCC-CCH
Confidence 887344 4577888999999999998876665443 689999999999985 45445588999999999999884 444
Q ss_pred C--CcccccccccccCCCcccC
Q 037488 369 E--GSFRNFLAESFKGNELLCG 388 (628)
Q Consensus 369 ~--~~~~~~~~~~~~~~~~~~~ 388 (628)
. ..+..+....+.+|+..|.
T Consensus 491 ~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 491 GVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp TSTTTCTTCCCEECCSCCBCCC
T ss_pred HHHhcCCCCCEEEecCCCcCCC
Confidence 2 3345566667777877764
No 31
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2e-35 Score=324.59 Aligned_cols=336 Identities=19% Similarity=0.216 Sum_probs=291.1
Q ss_pred cCCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCC
Q 037488 30 VQLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNC 109 (628)
Q Consensus 30 n~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l 109 (628)
..+.+++.|++++|.+..+++..|.++++|+.|+|++|.++++.+..|+++++|+.|+|++|.++.+++. .|.++
T Consensus 48 l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~l 122 (597)
T 3oja_B 48 ITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPH-----VFQNV 122 (597)
T ss_dssp GGGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTT-----TTTTC
T ss_pred ccCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHH-----HHcCC
Confidence 3477899999999999988888899999999999999999999999999999999999999999987653 47899
Q ss_pred CCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEee
Q 037488 110 KYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLN 189 (628)
Q Consensus 110 ~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 189 (628)
++|++|+|++|.++++.+..|..++ .|+.|++++|.+.+..|..|..+++|+.|++++|.+++.. ++.+++|+.|+
T Consensus 123 ~~L~~L~L~~n~l~~l~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~ 198 (597)
T 3oja_B 123 PLLTVLVLERNDLSSLPRGIFHNTP-KLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHAN 198 (597)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEE
T ss_pred CCCCEEEeeCCCCCCCCHHHhccCC-CCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhh
Confidence 9999999999999988777778776 7999999999999999999999999999999999998642 56789999999
Q ss_pred cccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCC
Q 037488 190 LEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGP 269 (628)
Q Consensus 190 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~ 269 (628)
+++|.+.+ +...++|+.|++++|.+....+... ++|+.|+|++|.++.. ..+..+++|++|++++|.+++.
T Consensus 199 l~~n~l~~-----l~~~~~L~~L~ls~n~l~~~~~~~~---~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~ 269 (597)
T 3oja_B 199 VSYNLLST-----LAIPIAVEELDASHNSINVVRGPVN---VELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKI 269 (597)
T ss_dssp CCSSCCSE-----EECCTTCSEEECCSSCCCEEECSCC---SCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEE
T ss_pred cccCcccc-----ccCCchhheeeccCCcccccccccC---CCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCC
Confidence 99998874 3455689999999999987654433 6899999999999985 5788899999999999999999
Q ss_pred CCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcC
Q 037488 270 LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKL 349 (628)
Q Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 349 (628)
.|..|..+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|.+++.. +..+
T Consensus 270 ~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~ 344 (597)
T 3oja_B 270 MYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTH 344 (597)
T ss_dssp ESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTT
T ss_pred CHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhc
Confidence 99999999999999999999986 5667788999999999999998 67778899999999999999998763 5678
Q ss_pred CCCCEEEccCCcceecCCCCCcccccccccccCCCcccCC
Q 037488 350 LDLKDINVSFNKLEGEIPREGSFRNFLAESFKGNELLCGM 389 (628)
Q Consensus 350 ~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~~~~~~~~ 389 (628)
++|+.|++++|++.+.... ..+..+....+.++...|+.
T Consensus 345 ~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~ 383 (597)
T 3oja_B 345 HTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 383 (597)
T ss_dssp CCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCT
T ss_pred CCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCc
Confidence 8999999999999875432 12334444455666667764
No 32
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1e-34 Score=297.59 Aligned_cols=305 Identities=27% Similarity=0.422 Sum_probs=262.9
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCC
Q 037488 31 QLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCK 110 (628)
Q Consensus 31 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~ 110 (628)
++++|++|++++|.+... | .+..+++|++|++++|+++++.+ |.++++|++|++++|.++.+ ..+.+++
T Consensus 42 ~l~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-------~~~~~l~ 110 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-------SALQNLT 110 (347)
T ss_dssp HHTTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-------GGGTTCT
T ss_pred hcccccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-------hHHcCCC
Confidence 367788888888888753 4 37889999999999999998755 99999999999999998875 3578999
Q ss_pred CCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeec
Q 037488 111 YLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNL 190 (628)
Q Consensus 111 ~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 190 (628)
+|++|++++|.+.+..+ +..++ .++.+++++|.....++ .+..+++|+.|++++|.+.+..+ +..+++|++|++
T Consensus 111 ~L~~L~l~~n~i~~~~~--~~~l~-~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l 184 (347)
T 4fmz_A 111 NLRELYLNEDNISDISP--LANLT-KMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSL 184 (347)
T ss_dssp TCSEEECTTSCCCCCGG--GTTCT-TCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEEC
T ss_pred cCCEEECcCCcccCchh--hccCC-ceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEc
Confidence 99999999999987654 66665 79999999997665544 48999999999999999986544 889999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCC
Q 037488 191 EYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~ 270 (628)
++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|.++.++. +..+++|++|++++|.+++.
T Consensus 185 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~- 258 (347)
T 4fmz_A 185 NYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI- 258 (347)
T ss_dssp TTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-
T ss_pred cCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC-
Confidence 9999985433 8899999999999999987544 8899999999999999999887 88899999999999999864
Q ss_pred CCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCC
Q 037488 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLL 350 (628)
Q Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 350 (628)
..+..+++|+.|++++|.+++. ..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++..| +..++
T Consensus 259 -~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~ 333 (347)
T 4fmz_A 259 -NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLS 333 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCT
T ss_pred -hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhh
Confidence 4688999999999999999865 357889999999999999998889999999999999999999998766 88899
Q ss_pred CCCEEEccCCcce
Q 037488 351 DLKDINVSFNKLE 363 (628)
Q Consensus 351 ~L~~l~l~~N~l~ 363 (628)
+|+.|++++|+++
T Consensus 334 ~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 334 KMDSADFANQVIK 346 (347)
T ss_dssp TCSEESSSCC---
T ss_pred ccceeehhhhccc
Confidence 9999999999875
No 33
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.7e-37 Score=307.21 Aligned_cols=182 Identities=25% Similarity=0.409 Sum_probs=140.3
Q ss_pred cCCCcccccccCCccEEEEEEec------CCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 427 NGFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
++|...+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++|+|.+++..
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 46777889999999999999863 4788999999876666678899999999999999999999998654311
Q ss_pred -----------------------------------------------------------------------------ccc
Q 037488 499 -----------------------------------------------------------------------------ADF 501 (628)
Q Consensus 499 -----------------------------------------------------------------------------~DF 501 (628)
+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DF 172 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDF 172 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCc
Confidence 499
Q ss_pred cccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCc
Q 037488 502 GMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 502 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
|+|+..............+||++|||||++.++.|+.++|||||||++|||+| |+.||.+.... .+...+.
T Consensus 173 Gla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~------ 244 (299)
T 4asz_A 173 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECIT------ 244 (299)
T ss_dssp SCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHH------
T ss_pred ccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHH------
Confidence 99997654433333344579999999999999999999999999999999999 89999764221 1111111
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+ ..+..|..++.++.+|+.+||+.||++||||+||
T Consensus 245 ---------~~---~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i 280 (299)
T 4asz_A 245 ---------QG---RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGI 280 (299)
T ss_dssp ---------HT---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---------cC---CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 01 1123445678889999999999999999998764
No 34
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.2e-37 Score=309.58 Aligned_cols=182 Identities=23% Similarity=0.415 Sum_probs=133.2
Q ss_pred cCCCcccccccCCccEEEEEEec------CCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 427 NGFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
.+|...+.||+|+||+||+|++. +++.||||+++.......+.|.+|+++|++++|||||+++|+|.+++..
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45666788999999999999863 4789999999876666678899999999999999999999988653211
Q ss_pred -------------------------------------------------------------------------------c
Q 037488 499 -------------------------------------------------------------------------------A 499 (628)
Q Consensus 499 -------------------------------------------------------------------------------~ 499 (628)
+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~ 200 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG 200 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEc
Confidence 4
Q ss_pred cccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcC
Q 037488 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLP 578 (628)
Q Consensus 500 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~ 578 (628)
|||+|+...........+..+||++|||||++.+..|+.++|||||||++|||+| |+.||.+.... .....+.
T Consensus 201 DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~--~~~~~i~---- 274 (329)
T 4aoj_A 201 DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNT--EAIDCIT---- 274 (329)
T ss_dssp CCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHH--HHHHHHH----
T ss_pred ccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCHH--HHHHHHH----
Confidence 9999997654443333455689999999999999999999999999999999999 89999753211 1111111
Q ss_pred CccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 579 ISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+ .++..|..+++++.+|+.+||+.||++||||+||
T Consensus 275 -----------~g---~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei 310 (329)
T 4aoj_A 275 -----------QG---RELERPRACPPEVYAIMRGCWQREPQQRHSIKDV 310 (329)
T ss_dssp -----------HT---CCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred -----------cC---CCCCCcccccHHHHHHHHHHcCcChhHCcCHHHH
Confidence 01 1223445678889999999999999999999764
No 35
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.6e-37 Score=305.43 Aligned_cols=181 Identities=22% Similarity=0.368 Sum_probs=138.6
Q ss_pred CCCcccccccCCccEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 428 GFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
.+...+.||+|+||+||+|++. +++.||||+++... ....+.|.+|+.++++++|||||+++|+|.+++..
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455678999999999999862 46889999997543 33457899999999999999999999988653211
Q ss_pred --------------------------------------------------------------------------------
Q 037488 499 -------------------------------------------------------------------------------- 498 (628)
Q Consensus 499 -------------------------------------------------------------------------------- 498 (628)
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki 186 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKI 186 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEE
Confidence
Q ss_pred ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhc
Q 037488 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLL 577 (628)
Q Consensus 499 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~ 577 (628)
+|||+|+...........+..+||++|||||++.++.|+.++|||||||++|||+| |+.||.+.... .+...+..
T Consensus 187 ~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~--~~~~~i~~-- 262 (308)
T 4gt4_A 187 SDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQ--DVVEMIRN-- 262 (308)
T ss_dssp CCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHH--HHHHHHHT--
T ss_pred CCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc--
Confidence 49999997655444444456789999999999999999999999999999999999 89999764221 11111110
Q ss_pred CCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 578 PISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+.|..|+.++.+|+.+||+.||++||||.||
T Consensus 263 ----------------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 263 ----------------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp ----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----------------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 01123455678889999999999999999999764
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.6e-34 Score=320.90 Aligned_cols=363 Identities=21% Similarity=0.201 Sum_probs=288.5
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccC-----------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcc
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQ-----------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSF 69 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-----------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 69 (628)
||||+|+|+++.|++|.++++|++|+|++|+ +++|++|+|++|+++++.+..|.++++|++|+|++|++
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcc
Confidence 6899999999999999999999999999996 56899999999999988888899999999999999999
Q ss_pred ccc-CccccCCCCCCCEEEccCccccCCCCCCcccccccC------------------------CCCCcEEEcccCCCCC
Q 037488 70 YGF-IPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSN------------------------CKYLKYFSFSNNSLDG 124 (628)
Q Consensus 70 ~~~-~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~------------------------l~~L~~L~l~~n~l~~ 124 (628)
+++ .|..|+++++|++|++++|+++.+.+.. +..+.+ ...++.+++++|....
T Consensus 161 ~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~--l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 161 QSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTD--LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCCEECGGG--GHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSH
T ss_pred ccCCCchhhccchhhhhhcccCcccccccccc--ccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccc
Confidence 875 4788999999999999999988654210 000100 1111222222221100
Q ss_pred -------------------------------CCc----------------------------------------------
Q 037488 125 -------------------------------ILP---------------------------------------------- 127 (628)
Q Consensus 125 -------------------------------~~p---------------------------------------------- 127 (628)
...
T Consensus 239 ~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 318 (635)
T 4g8a_A 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTI 318 (635)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEE
T ss_pred cccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccc
Confidence 000
Q ss_pred ---hHHhccccccceeeccCCcccccCC-------------------ccccCCCCCCEEEccCCcCCc--cccccccCCC
Q 037488 128 ---RAIGNLSQSMEIFWMHSCNISGGIP-------------------EEISNLTNLIAIYLGGNKLNG--SIPIALGKLQ 183 (628)
Q Consensus 128 ---~~~~~l~~~l~~l~l~~n~~~~~~~-------------------~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~ 183 (628)
..+.. ...++.+.+.+|.+....+ .....+++|+.|++++|.+.. ..+..+..+.
T Consensus 319 ~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~ 397 (635)
T 4g8a_A 319 ERVKDFSY-NFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTI 397 (635)
T ss_dssp EECGGGGS-CCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCS
T ss_pred cccccccc-chhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhh
Confidence 00000 0124445555554433221 123467899999999998863 3455677889
Q ss_pred CCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCC-CCccCCCCCcEEEccCCcCCcC-CCCccCCCCCcEEEc
Q 037488 184 KLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVP-ASFGNLTNLRSLHLGSNQITSI-PSTLLNLKDILYLNL 261 (628)
Q Consensus 184 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l 261 (628)
+|+.+++..|.+.. .+..+..+++|+.+++..|......+ ..|..+++++.++++.|.+..+ |..+..+++|+.|++
T Consensus 398 ~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~L 476 (635)
T 4g8a_A 398 SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKM 476 (635)
T ss_dssp CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEEC
T ss_pred hhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhhhhh
Confidence 99999999999874 45678899999999999988766544 5788999999999999999976 455667899999999
Q ss_pred CCCCC-cCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 262 SSNFF-TGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 262 ~~n~l-~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
++|.+ .+..|..|..+++|++|+|++|++++..|..|+.+++|++|+|++|++++..|..|..+++|+.|++++|+|++
T Consensus 477 s~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~ 556 (635)
T 4g8a_A 477 AGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 556 (635)
T ss_dssp TTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCB
T ss_pred hhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCC
Confidence 99974 44678899999999999999999999999999999999999999999999889999999999999999999999
Q ss_pred cCchhhhcC-CCCCEEEccCCcceecCC
Q 037488 341 IIPISLEKL-LDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 341 ~~~~~~~~l-~~L~~l~l~~N~l~~~~p 367 (628)
+.|..+..+ ++|+.|++++|++.+.+.
T Consensus 557 ~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 557 SKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp CCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 999999888 689999999999998664
No 37
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=300.83 Aligned_cols=186 Identities=27% Similarity=0.380 Sum_probs=134.1
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.+++...+.||+|+||+||+|++.. .||||+++.. ..+..+.|.+|++++++++|||||+++|+|.++...
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy 112 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEc
Confidence 3567778899999999999998753 5999998743 344567899999999999999999999998764421
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+............
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~ 192 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeec
Confidence 4999998764433333345
Q ss_pred cccccccccCcccccc---CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 518 QTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~---~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
+.+||+.|||||++.+ ++|+.++|||||||++|||+||+.||.+..... .....+.... .. +
T Consensus 193 ~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~-------~~-------p 257 (307)
T 3omv_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGY-------AS-------P 257 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTC-------CC-------C
T ss_pred ccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCC-------CC-------C
Confidence 6689999999999864 469999999999999999999999997543211 1111111100 00 1
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+|+.+||+.||++||||.||
T Consensus 258 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei 291 (307)
T 3omv_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp CSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHH
T ss_pred CcccccccchHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 1122345678889999999999999999998764
No 38
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=2e-34 Score=304.83 Aligned_cols=323 Identities=21% Similarity=0.246 Sum_probs=236.5
Q ss_pred cccCCChhccCCCCCCEEecCccC---------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccC
Q 037488 8 LVGVVPTTIFNVSTLNSLYLQNVQ---------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFG 78 (628)
Q Consensus 8 l~~~~p~~~~~l~~L~~L~l~~n~---------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~ 78 (628)
..+..+..++++++|++|++++|. +++|++|+|++|.++++ | +..+++|++|++++|+++++ + |+
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~ 103 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VT 103 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CT
T ss_pred cCcccccChhHcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cC
Confidence 344455567778888888888775 35678888888888764 3 77888888888888888875 2 88
Q ss_pred CCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCC
Q 037488 79 NLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNL 158 (628)
Q Consensus 79 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l 158 (628)
++++|++|++++|.++.++ +.++++|++|++++|.++++ + ++.++ .|+.|++++|...+.+ .+..+
T Consensus 104 ~l~~L~~L~L~~N~l~~l~--------~~~l~~L~~L~l~~N~l~~l-~--l~~l~-~L~~L~l~~n~~~~~~--~~~~l 169 (457)
T 3bz5_A 104 PLTKLTYLNCDTNKLTKLD--------VSQNPLLTYLNCARNTLTEI-D--VSHNT-QLTELDCHLNKKITKL--DVTPQ 169 (457)
T ss_dssp TCTTCCEEECCSSCCSCCC--------CTTCTTCCEEECTTSCCSCC-C--CTTCT-TCCEEECTTCSCCCCC--CCTTC
T ss_pred CCCcCCEEECCCCcCCeec--------CCCCCcCCEEECCCCcccee-c--cccCC-cCCEEECCCCCccccc--ccccC
Confidence 8888888888888887642 56788888888888888875 2 45554 6888888888655555 47778
Q ss_pred CCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEc
Q 037488 159 TNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHL 238 (628)
Q Consensus 159 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (628)
++|+.|++++|++++ +| +..+++|+.|++++|++++. .+..+++|++|++++|++++ +| +..+++|+.|++
T Consensus 170 ~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l 240 (457)
T 3bz5_A 170 TQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDC 240 (457)
T ss_dssp TTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEEC
T ss_pred CcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEe
Confidence 888888888888876 44 77888888888888888764 37788888888888888887 34 778888888888
Q ss_pred cCCcCCcCCCCccCCCCC----------cEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCcc--------ccCC
Q 037488 239 GSNQITSIPSTLLNLKDI----------LYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPI--------TIGY 300 (628)
Q Consensus 239 ~~n~l~~lp~~~~~l~~L----------~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------~~~~ 300 (628)
++|+++++|. ..+++| +.|++++|.+.+..| ++.+++|+.|++++|...+.+|. .+..
T Consensus 241 ~~N~l~~~~~--~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~ 316 (457)
T 3bz5_A 241 SVNPLTELDV--STLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQ 316 (457)
T ss_dssp CSSCCSCCCC--TTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTT
T ss_pred eCCcCCCcCH--HHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhh
Confidence 8888888763 233444 445555555444444 45678888888888876655553 2456
Q ss_pred CCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhh-------------cCCCCCEEEccCCcceecCC
Q 037488 301 LKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLE-------------KLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 301 l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~-------------~l~~L~~l~l~~N~l~~~~p 367 (628)
+++|++|++++|++++. + ++.+++|+.|++++|+++++. .+. .+..|..+++++|+++|.+|
T Consensus 317 ~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~l~--~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip 391 (457)
T 3bz5_A 317 NPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQDFS--SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVS 391 (457)
T ss_dssp CTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCBCT--TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECC
T ss_pred cccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCCcc--ccccccccCCcEEecceeeecCccccccCcEEEEcC
Confidence 67888999999998874 3 788889999999999888632 111 12345666777777777776
Q ss_pred C
Q 037488 368 R 368 (628)
Q Consensus 368 ~ 368 (628)
.
T Consensus 392 ~ 392 (457)
T 3bz5_A 392 P 392 (457)
T ss_dssp T
T ss_pred h
Confidence 4
No 39
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=4.1e-34 Score=302.19 Aligned_cols=283 Identities=28% Similarity=0.381 Sum_probs=170.8
Q ss_pred CCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcE
Q 037488 35 LEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKY 114 (628)
Q Consensus 35 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~ 114 (628)
|++|++++|.+++ +|.. +++|+.|++++|+++++.. . .++|++|++++|.++.++ .+.++++|++
T Consensus 93 L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~-~---~~~L~~L~L~~n~l~~lp-------~~~~l~~L~~ 157 (454)
T 1jl5_A 93 LESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSD-L---PPLLEYLGVSNNQLEKLP-------ELQNSSFLKI 157 (454)
T ss_dssp CSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCS-C---CTTCCEEECCSSCCSSCC-------CCTTCTTCCE
T ss_pred CCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccC-C---CCCCCEEECcCCCCCCCc-------ccCCCCCCCE
Confidence 4555555555543 3321 2455555555555544321 0 145666666666655432 2566667777
Q ss_pred EEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCc
Q 037488 115 FSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQ 194 (628)
Q Consensus 115 L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 194 (628)
|++++|++++ +|.. ...++.|++++|.+.+ +| .++++++|+.|++++|++++ +|.. .++|++|++++|+
T Consensus 158 L~l~~N~l~~-lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 158 IDVDNNSLKK-LPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGNNI 226 (454)
T ss_dssp EECCSSCCSC-CCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSC
T ss_pred EECCCCcCcc-cCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcCCc
Confidence 7777776665 2322 1256667777776665 34 46667777777777777664 3332 2466777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcc
Q 037488 195 LEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEI 274 (628)
Q Consensus 195 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~ 274 (628)
+. .+| .+..+++|++|++++|++++ +|.. +++|+.|++++|+++++|.. .++|++|++++|.+++.. ..
T Consensus 227 l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~l~~~---~~~L~~L~ls~N~l~~l~-~~- 295 (454)
T 1jl5_A 227 LE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTDLPEL---PQSLTFLDVSENIFSGLS-EL- 295 (454)
T ss_dssp CS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSEES-CC-
T ss_pred CC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccccCcc---cCcCCEEECcCCccCccc-Cc-
Confidence 66 445 36667777777777777764 2322 35677777777777766653 256777777777766521 11
Q ss_pred cCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCE
Q 037488 275 GNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKD 354 (628)
Q Consensus 275 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 354 (628)
.++|+.|++++|++++. +. ..++|++|++++|++++ +|.. +++|+.|++++|.++++ |. .+++|+.
T Consensus 296 --~~~L~~L~l~~N~l~~i-~~---~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~l-p~---~l~~L~~ 361 (454)
T 1jl5_A 296 --PPNLYYLNASSNEIRSL-CD---LPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEV-PE---LPQNLKQ 361 (454)
T ss_dssp --CTTCCEEECCSSCCSEE-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC-CC---CCTTCCE
T ss_pred --CCcCCEEECcCCcCCcc-cC---CcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccccc-cc---hhhhccE
Confidence 14566666776666542 11 12578888888888875 5543 47788888888888754 33 4678888
Q ss_pred EEccCCccee--cCCC
Q 037488 355 INVSFNKLEG--EIPR 368 (628)
Q Consensus 355 l~l~~N~l~~--~~p~ 368 (628)
|++++|++++ .+|.
T Consensus 362 L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 362 LHVEYNPLREFPDIPE 377 (454)
T ss_dssp EECCSSCCSSCCCCCT
T ss_pred EECCCCCCCcCCCChH
Confidence 8888888887 5554
No 40
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.5e-36 Score=303.84 Aligned_cols=182 Identities=23% Similarity=0.232 Sum_probs=142.4
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
..|+..+.||+|+||+||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++.+++..
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 5689999999999999999987 67999999999866555566789999999999999999999987654321
Q ss_pred ----------------------------------------------------------ccccccccccccCccccccccc
Q 037488 499 ----------------------------------------------------------ADFGMAKPLLKEDQSLIQTQTL 520 (628)
Q Consensus 499 ----------------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 520 (628)
+|||+|+.+.... ....+.+
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~~ 231 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSLV 231 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--CCBCCCC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCC--Ccccccc
Confidence 4999999764432 2235678
Q ss_pred ccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhch
Q 037488 521 ATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIK 600 (628)
Q Consensus 521 gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (628)
||++|||||++.+..|+.++||||+||++|||++|++||.+.... .....+... .......+
T Consensus 232 GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~----------------~~~~~~~~ 293 (346)
T 4fih_A 232 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN----------------LPPRLKNL 293 (346)
T ss_dssp SCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS----------------SCCCCSCG
T ss_pred cCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC----------------CCCCCCcc
Confidence 999999999999999999999999999999999999999753211 111111110 01112233
Q ss_pred hhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 601 GQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 601 ~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+++++++|+.+||+.||++|||+.|+
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~ 321 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAEL 321 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 4567789999999999999999998763
No 41
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.3e-36 Score=297.97 Aligned_cols=181 Identities=18% Similarity=0.255 Sum_probs=142.9
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999987 679999999997542 23456789999999999999999999988765422
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+.+.........
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~ 191 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARA 191 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCB
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccc
Confidence 499999987544433344
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
.+.+||+.|||||++.+..|+.++||||+||++|||+||++||.+... ...... +....
T Consensus 192 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-----~~~~~~------------i~~~~---- 250 (311)
T 4aw0_A 192 NSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAK------------IIKLE---- 250 (311)
T ss_dssp CCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH------------HHHTC----
T ss_pred cCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------------HHcCC----
Confidence 667999999999999999999999999999999999999999965321 111111 11111
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..|...++++++|+.+||++||++|||++|+
T Consensus 251 ~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 251 YDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred CCCCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 11233456779999999999999999999863
No 42
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.2e-33 Score=289.47 Aligned_cols=299 Identities=27% Similarity=0.401 Sum_probs=260.0
Q ss_pred hccCCCCCCEEecCccC---------CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCE
Q 037488 15 TIFNVSTLNSLYLQNVQ---------LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNR 85 (628)
Q Consensus 15 ~~~~l~~L~~L~l~~n~---------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~ 85 (628)
.+..+++|+.|+++++. +++|++|++++|.+++..+ +.++++|++|++++|.++.+ .+|.++++|++
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~ 114 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRE 114 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSE
T ss_pred cchhcccccEEEEeCCccccchhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCE
Confidence 35678999999999886 5679999999999986544 89999999999999999985 36999999999
Q ss_pred EEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEE
Q 037488 86 LGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIY 165 (628)
Q Consensus 86 L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~ 165 (628)
|++++|.++..+ .+.++++|++|++++|......+. +..++ .|+.+++++|.+.+..+ +..+++|+.|+
T Consensus 115 L~l~~n~i~~~~-------~~~~l~~L~~L~l~~n~~~~~~~~-~~~l~-~L~~L~l~~~~~~~~~~--~~~l~~L~~L~ 183 (347)
T 4fmz_A 115 LYLNEDNISDIS-------PLANLTKMYSLNLGANHNLSDLSP-LSNMT-GLNYLTVTESKVKDVTP--IANLTDLYSLS 183 (347)
T ss_dssp EECTTSCCCCCG-------GGTTCTTCCEEECTTCTTCCCCGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCSEEE
T ss_pred EECcCCcccCch-------hhccCCceeEEECCCCCCcccccc-hhhCC-CCcEEEecCCCcCCchh--hccCCCCCEEE
Confidence 999999998753 378899999999999976655444 66665 79999999999886544 88999999999
Q ss_pred ccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCc
Q 037488 166 LGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITS 245 (628)
Q Consensus 166 L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 245 (628)
+++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.++.
T Consensus 184 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 257 (347)
T 4fmz_A 184 LNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD 257 (347)
T ss_dssp CTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC
T ss_pred ccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC
Confidence 99999986543 8899999999999999986543 8899999999999999987554 8999999999999999999
Q ss_pred CCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCC
Q 037488 246 IPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDL 325 (628)
Q Consensus 246 lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l 325 (628)
++ .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..+..++.+++|++|++++|++++..| +..+
T Consensus 258 ~~-~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l 332 (347)
T 4fmz_A 258 IN-AVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASL 332 (347)
T ss_dssp CG-GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGC
T ss_pred Ch-hHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhh
Confidence 84 577899999999999999875 458899999999999999998888989999999999999999987655 8889
Q ss_pred CCCCEEECcCCccc
Q 037488 326 INLKSLDLSNNNLS 339 (628)
Q Consensus 326 ~~L~~L~l~~N~l~ 339 (628)
++|+.|++++|.++
T Consensus 333 ~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 333 SKMDSADFANQVIK 346 (347)
T ss_dssp TTCSEESSSCC---
T ss_pred hccceeehhhhccc
Confidence 99999999999886
No 43
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.5e-36 Score=301.77 Aligned_cols=181 Identities=17% Similarity=0.233 Sum_probs=135.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|+..+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|++++++++|||||++++++.+++..
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm 102 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM 102 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence 47899999999999999999987 67999999999754 234567899999999999999999999987543321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+.+.... .
T Consensus 103 Ey~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 180 (350)
T 4b9d_A 103 DYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--E 180 (350)
T ss_dssp ECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH--H
T ss_pred eCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc--c
Confidence 4999999764322 1
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...+.+||+.|||||++.+..|+.++||||+||++|||+||++||.+.. ........ .....
T Consensus 181 ~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i------------~~~~~- 242 (350)
T 4b9d_A 181 LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKI------------ISGSF- 242 (350)
T ss_dssp HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHH------------HHTCC-
T ss_pred cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHH------------HcCCC-
Confidence 2345689999999999999999999999999999999999999997532 11111111 11111
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..+..++.++++|+.+||+.||++|||+.|+
T Consensus 243 --~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~ 274 (350)
T 4b9d_A 243 --PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274 (350)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 11233467789999999999999999998763
No 44
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.2e-33 Score=293.40 Aligned_cols=299 Identities=18% Similarity=0.199 Sum_probs=256.6
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCC
Q 037488 31 QLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCK 110 (628)
Q Consensus 31 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~ 110 (628)
++++|++|++++|.+++. | .+..+++|++|+|++|+++++ | |+.+++|++|++++|.++.++ +.+++
T Consensus 40 ~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~~--------~~~l~ 106 (457)
T 3bz5_A 40 QLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNLD--------VTPLT 106 (457)
T ss_dssp HHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCC--------CTTCT
T ss_pred HcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCceee--------cCCCC
Confidence 378999999999999975 5 689999999999999999986 3 999999999999999998752 67899
Q ss_pred CCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeec
Q 037488 111 YLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNL 190 (628)
Q Consensus 111 ~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 190 (628)
+|++|++++|.++++ | ++.++ .|+.|++++|.+++. .++.+++|+.|++++|...+.+ .++.+++|++|++
T Consensus 107 ~L~~L~L~~N~l~~l-~--~~~l~-~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l 177 (457)
T 3bz5_A 107 KLTYLNCDTNKLTKL-D--VSQNP-LLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDC 177 (457)
T ss_dssp TCCEEECCSSCCSCC-C--CTTCT-TCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEEC
T ss_pred cCCEEECCCCcCCee-c--CCCCC-cCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEEC
Confidence 999999999999985 3 66665 799999999999984 3889999999999999666555 4789999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCC
Q 037488 191 EYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~ 270 (628)
++|++++ +| +..+++|+.|++++|++++. .++.+++|+.|++++|+++++| +..+++|++|++++|.+++..
T Consensus 178 s~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~ 249 (457)
T 3bz5_A 178 SFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELD 249 (457)
T ss_dssp CSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC
T ss_pred CCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcC
Confidence 9999996 44 88999999999999999875 4889999999999999999998 778999999999999999876
Q ss_pred CCcccCCc-------cccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCCh--------hhcCCCCCCEEECcC
Q 037488 271 PLEIGNLK-------VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPD--------SIGDLINLKSLDLSN 335 (628)
Q Consensus 271 ~~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~--------~~~~l~~L~~L~l~~ 335 (628)
+..+..+. +|+.|++++|.+.+.+| ++.+++|+.|++++|...+.+|. .++.+++|+.|++++
T Consensus 250 ~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~ 327 (457)
T 3bz5_A 250 VSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNN 327 (457)
T ss_dssp CTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTT
T ss_pred HHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCC
Confidence 65555554 45566666666665555 46789999999999987665553 256678999999999
Q ss_pred CcccccCchhhhcCCCCCEEEccCCccee
Q 037488 336 NNLSGIIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 336 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
|+++++ + +..+++|+.|++++|++++
T Consensus 328 N~l~~l-~--l~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 328 TELTEL-D--VSHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp CCCSCC-C--CTTCTTCSEEECCSSCCCB
T ss_pred Cccccc-c--cccCCcCcEEECCCCCCCC
Confidence 999985 3 8889999999999999987
No 45
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-33 Score=291.79 Aligned_cols=312 Identities=18% Similarity=0.234 Sum_probs=273.5
Q ss_pred CCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccc
Q 037488 55 NASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS 134 (628)
Q Consensus 55 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 134 (628)
.+++++.|++++|.+..+.+..|.++++|++|++++|.++.+++ ..+.++++|++|++++|.++++.|..|..++
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 117 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT-----YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 117 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECT-----TTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccCh-----hhccCCCCcCEEECCCCCCCcCCHHHhcCCC
Confidence 46899999999999999888889999999999999999987654 3588999999999999999999999898886
Q ss_pred cccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEc
Q 037488 135 QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDL 214 (628)
Q Consensus 135 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 214 (628)
.|+.|++++|.+....+..|..+++|++|++++|.+.+..|..+..+++|++|++++|++++. .+..+++|+.|++
T Consensus 118 -~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l 193 (390)
T 3o6n_A 118 -LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 193 (390)
T ss_dssp -TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEEC
T ss_pred -CCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeec
Confidence 799999999999976666689999999999999999988888899999999999999999864 3677899999999
Q ss_pred cCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCC
Q 037488 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVI 294 (628)
Q Consensus 215 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 294 (628)
++|.+++. ...++|+.|++++|.++.+|... .++|+.|++++|.+++. ..+..+++|+.|++++|.+++..
T Consensus 194 ~~n~l~~~-----~~~~~L~~L~l~~n~l~~~~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~ 264 (390)
T 3o6n_A 194 SYNLLSTL-----AIPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIM 264 (390)
T ss_dssp CSSCCSEE-----ECCSSCSEEECCSSCCCEEECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEE
T ss_pred cccccccc-----CCCCcceEEECCCCeeeeccccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcC
Confidence 99998754 33468999999999999987654 47999999999999864 57899999999999999999988
Q ss_pred ccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccc
Q 037488 295 PITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRN 374 (628)
Q Consensus 295 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~ 374 (628)
|..+..+++|++|++++|++++ +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|+++... ...+..
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~ 340 (390)
T 3o6n_A 265 YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--LSTHHT 340 (390)
T ss_dssp SGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCC
T ss_pred hhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCccee-cCccccccCcCCEEECCCCccceeC--chhhcc
Confidence 9999999999999999999985 56667889999999999999985 4666888999999999999998543 334566
Q ss_pred cccccccCCCcccC
Q 037488 375 FLAESFKGNELLCG 388 (628)
Q Consensus 375 ~~~~~~~~~~~~~~ 388 (628)
+....+.+|+..|.
T Consensus 341 L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 341 LKNLTLSHNDWDCN 354 (390)
T ss_dssp CSEEECCSSCEEHH
T ss_pred CCEEEcCCCCccch
Confidence 77777888887764
No 46
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.2e-33 Score=281.74 Aligned_cols=287 Identities=25% Similarity=0.295 Sum_probs=211.3
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCc
Q 037488 34 NLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLK 113 (628)
Q Consensus 34 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 113 (628)
+++.+++++|.++ .+|..+ .++|+.|++++|.++++.+.+|.++++|++|++++|.++.+.+ ..+.++++|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~ 105 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEI--SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHE-----KAFSPLRKLQ 105 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCC--CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECG-----GGSTTCTTCC
T ss_pred cCCEEECCCCCcc-ccCCCC--CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCH-----hHhhCcCCCC
Confidence 4667777777766 344433 2567777777777777777777777777777777777765532 3466777777
Q ss_pred EEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCc--cccccccCCCCCCEeecc
Q 037488 114 YFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNG--SIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 114 ~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~ 191 (628)
+|++++|.++.+.+. +. ..|+.|++++|.+....+..|..+++|+.|++++|.++. ..|..+..+ +|++|+++
T Consensus 106 ~L~L~~n~l~~l~~~-~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~ 180 (332)
T 2ft3_A 106 KLYISKNHLVEIPPN-LP---SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180 (332)
T ss_dssp EEECCSSCCCSCCSS-CC---TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC
T ss_pred EEECCCCcCCccCcc-cc---ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc
Confidence 777777777744332 22 367777777777776666678888888888888888853 566677777 88888888
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCC
Q 037488 192 YNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 192 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~ 270 (628)
+|++.+ +|..+. ++|++|++++|.+++..+..|..+++|+.|++++|+++.++. .+..+++|++|++++|.++ .+
T Consensus 181 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 256 (332)
T 2ft3_A 181 EAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256 (332)
T ss_dssp SSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BC
T ss_pred CCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ec
Confidence 888875 454443 678888888888887777788888888888888888888764 5677888888888888887 56
Q ss_pred CCcccCCccccEEEcCCCcCCCCCccccCC------CCCCCEEeCCCCcCc--ccCChhhcCCCCCCEEECcCCc
Q 037488 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGY------LKDLQYLFLEYNRLQ--GSIPDSIGDLINLKSLDLSNNN 337 (628)
Q Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~l~~n~~~--~~~~~~~~~l~~L~~L~l~~N~ 337 (628)
|..+..+++|+.|++++|++++..+..|.. ...|+.|++++|++. +..|..|..+++|+.+++++|+
T Consensus 257 p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 257 PAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 667888888888888888888776666654 367889999999887 5677888899999999998874
No 47
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.3e-35 Score=288.72 Aligned_cols=179 Identities=19% Similarity=0.290 Sum_probs=125.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++.+++..
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999999987 679999999997532 23356789999999999999999999988665422
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...... ..
T Consensus 92 mEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~---~~ 168 (275)
T 3hyh_A 92 IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FL 168 (275)
T ss_dssp EECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred EeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC---cc
Confidence 4999998654332 23
Q ss_pred ccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.+.+||+.|||||++.+..| +.++||||+||++|||+||+.||.+.. ......... ...
T Consensus 169 ~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~------------~~~--- 228 (275)
T 3hyh_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNIS------------NGV--- 228 (275)
T ss_dssp ------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH------------HTC---
T ss_pred CCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHH------------cCC---
Confidence 45789999999999998886 579999999999999999999996521 111111110 000
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..|..+++++++|+.+||+.||++|||++|+
T Consensus 229 -~~~p~~~s~~~~~li~~~L~~dP~~R~s~~ei 260 (275)
T 3hyh_A 229 -YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEI 260 (275)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 11233456779999999999999999998763
No 48
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=303.70 Aligned_cols=183 Identities=22% Similarity=0.230 Sum_probs=142.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
...|+..+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+++|++++|||||++++++..++..
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 35699999999999999999987 67999999999866555566789999999999999999999987654321
Q ss_pred -----------------------------------------------------------ccccccccccccCcccccccc
Q 037488 499 -----------------------------------------------------------ADFGMAKPLLKEDQSLIQTQT 519 (628)
Q Consensus 499 -----------------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 519 (628)
+|||+|+.+.... ....+.
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~--~~~~~~ 307 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV--PRRKSL 307 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC--CCBCCC
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCC--cccccc
Confidence 4999999764432 233567
Q ss_pred cccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhc
Q 037488 520 LATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599 (628)
Q Consensus 520 ~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (628)
+||++|||||++.+..|+.++||||+||++|||++|++||.+.... ......... .......
T Consensus 308 ~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~--~~~~~i~~~----------------~~~~~~~ 369 (423)
T 4fie_A 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL--KAMKMIRDN----------------LPPRLKN 369 (423)
T ss_dssp EECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHS----------------CCCCCSC
T ss_pred ccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH--HHHHHHHcC----------------CCCCCcc
Confidence 8999999999999999999999999999999999999999653211 111111110 0011122
Q ss_pred hhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 600 KGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 600 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..++.++++|+.+||+.||++|||+.|+
T Consensus 370 ~~~~s~~~~dli~~~L~~dP~~R~ta~el 398 (423)
T 4fie_A 370 LHKVSPSLKGFLDRLLVRDPAQRATAAEL 398 (423)
T ss_dssp TTSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred cccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 33457789999999999999999998763
No 49
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1e-32 Score=291.49 Aligned_cols=331 Identities=27% Similarity=0.352 Sum_probs=251.9
Q ss_pred CcccCCCcccCCChhccCCCCCCEEecCccCCC------------------------CCCEEEccCCcceecCCccccCC
Q 037488 1 MAFSFNKLVGVVPTTIFNVSTLNSLYLQNVQLQ------------------------NLEELLLWGNNFSGTIPSFIFNA 56 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~------------------------~L~~L~ls~N~l~~~~p~~~~~l 56 (628)
|++++|++ +.+|..|+++++|++|++++|++. ++++|++++|.++++ |.. .
T Consensus 16 L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~~---~ 90 (454)
T 1jl5_A 16 PLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PEL---P 90 (454)
T ss_dssp -------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CSC---C
T ss_pred hhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CCC---c
Confidence 57889999 688889999999999999887521 358999999999864 432 4
Q ss_pred CCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccc
Q 037488 57 SKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQS 136 (628)
Q Consensus 57 ~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~ 136 (628)
++|+.|++++|.++++ |.. +++|+.|++++|.++.++. + .++|++|++++|.+++ +| .|+.++ .
T Consensus 91 ~~L~~L~l~~n~l~~l-p~~---~~~L~~L~l~~n~l~~l~~-------~--~~~L~~L~L~~n~l~~-lp-~~~~l~-~ 154 (454)
T 1jl5_A 91 PHLESLVASCNSLTEL-PEL---PQSLKSLLVDNNNLKALSD-------L--PPLLEYLGVSNNQLEK-LP-ELQNSS-F 154 (454)
T ss_dssp TTCSEEECCSSCCSSC-CCC---CTTCCEEECCSSCCSCCCS-------C--CTTCCEEECCSSCCSS-CC-CCTTCT-T
T ss_pred CCCCEEEccCCcCCcc-ccc---cCCCcEEECCCCccCcccC-------C--CCCCCEEECcCCCCCC-Cc-ccCCCC-C
Confidence 7999999999999984 543 4899999999999987542 1 2689999999999997 55 477775 7
Q ss_pred cceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccC
Q 037488 137 MEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGS 216 (628)
Q Consensus 137 l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 216 (628)
|+.|++++|.+++ +|..+ .+|++|++++|++.+ +| .++.+++|++|++++|++.+ +|.. .++|++|++++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDL---PLSLESIVAGN 224 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCC---CTTCCEEECCS
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCC---cCcccEEECcC
Confidence 9999999999986 55443 589999999999986 56 59999999999999999985 4443 25899999999
Q ss_pred CcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCcc
Q 037488 217 NKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPI 296 (628)
Q Consensus 217 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 296 (628)
|.++ .+| .++.+++|++|++++|+++++|.. +++|++|++++|.+++ +|.. +++|+.|++++|.+++. |.
T Consensus 225 n~l~-~lp-~~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~ 294 (454)
T 1jl5_A 225 NILE-ELP-ELQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SE 294 (454)
T ss_dssp SCCS-SCC-CCTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SC
T ss_pred CcCC-ccc-ccCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cC
Confidence 9998 456 489999999999999999999864 4789999999999986 4443 37899999999999863 22
Q ss_pred ccCCCCCCCEEeCCCCcCcccCChhhcCC-CCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCccccc
Q 037488 297 TIGYLKDLQYLFLEYNRLQGSIPDSIGDL-INLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNF 375 (628)
Q Consensus 297 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~ 375 (628)
..++|+.|++++|++++ ++ .+ ++|+.|++++|+++++ |.. +++|+.|++++|++++ +|. ....+
T Consensus 295 ---~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~l-p~~---~~~L~~L~L~~N~l~~-lp~--~l~~L 359 (454)
T 1jl5_A 295 ---LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIEL-PAL---PPRLERLIASFNHLAE-VPE--LPQNL 359 (454)
T ss_dssp ---CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSC-CCC--CCTTC
T ss_pred ---cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCccccc-ccc---CCcCCEEECCCCcccc-ccc--hhhhc
Confidence 13689999999999985 33 23 5899999999999974 433 5899999999999984 565 34566
Q ss_pred ccccccCCCccc
Q 037488 376 LAESFKGNELLC 387 (628)
Q Consensus 376 ~~~~~~~~~~~~ 387 (628)
....+.+|....
T Consensus 360 ~~L~L~~N~l~~ 371 (454)
T 1jl5_A 360 KQLHVEYNPLRE 371 (454)
T ss_dssp CEEECCSSCCSS
T ss_pred cEEECCCCCCCc
Confidence 666666665443
No 50
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=3.2e-32 Score=276.78 Aligned_cols=288 Identities=23% Similarity=0.284 Sum_probs=192.7
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCc
Q 037488 34 NLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLK 113 (628)
Q Consensus 34 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 113 (628)
+++.++++++.++. +|..+ .++|+.|+|++|+++++.+..|+++++|++|++++|.++.+.+ ..+.++++|+
T Consensus 32 ~l~~l~~~~~~l~~-lp~~~--~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~ 103 (330)
T 1xku_A 32 HLRVVQCSDLGLEK-VPKDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISP-----GAFAPLVKLE 103 (330)
T ss_dssp ETTEEECTTSCCCS-CCCSC--CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCT-----TTTTTCTTCC
T ss_pred CCeEEEecCCCccc-cCccC--CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCH-----HHhcCCCCCC
Confidence 46666666666653 34333 2566777777777776666667777777777777776665533 2456667777
Q ss_pred EEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCc--cccccccCCCCCCEeecc
Q 037488 114 YFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNG--SIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 114 ~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~ 191 (628)
+|++++|.++.+ |..+. ..|+.|++++|.+.+..+..|.++++|+.|++++|.+.. ..+..+..+++|++|+++
T Consensus 104 ~L~Ls~n~l~~l-~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 104 RLYLSKNQLKEL-PEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp EEECCSSCCSBC-CSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred EEECCCCcCCcc-Chhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 777777776643 32221 356677777777766666667777777777777777753 455667777777777777
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCC
Q 037488 192 YNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 192 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~ 270 (628)
+|++.. +|..+. ++|++|++++|++++..+..|..+++|+.|++++|.++.++. .+..+++|++|++++|.++ .+
T Consensus 180 ~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 180 DTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 777763 444333 677777777777777667777777777777777777776544 5666777777777777776 45
Q ss_pred CCcccCCccccEEEcCCCcCCCCCccccCC------CCCCCEEeCCCCcCcc--cCChhhcCCCCCCEEECcCCc
Q 037488 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGY------LKDLQYLFLEYNRLQG--SIPDSIGDLINLKSLDLSNNN 337 (628)
Q Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~------l~~L~~L~l~~n~~~~--~~~~~~~~l~~L~~L~l~~N~ 337 (628)
|..+..+++|++|++++|++++..+..|.. ...|+.|++++|.+.. ..|..|..+.+++.+++++|+
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 666777777777777777777666655543 3678888888888753 556778888888899988874
No 51
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-34 Score=284.96 Aligned_cols=176 Identities=23% Similarity=0.331 Sum_probs=131.2
Q ss_pred CcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCC-----------
Q 037488 430 SENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSND----------- 495 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----------- 495 (628)
...+.||+|+||+||+|.. .+++.||||++... .....+.|.+|++++++++|||||+++++|...
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4456799999999999987 67999999999753 234467799999999999999999999876421
Q ss_pred ------Ccc--------------------------------------------------------ccccccccccccCcc
Q 037488 496 ------DFK--------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 496 ------~~~--------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+.. +|||+|+.....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~--- 185 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS--- 185 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC---
Confidence 100 499999854222
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
...+.+||+.|||||++.+ +|+.++|||||||++|||+||++||.+... .......... ..
T Consensus 186 -~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~------------~~- 246 (290)
T 3fpq_A 186 -FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTS------------GV- 246 (290)
T ss_dssp -SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTT------------TC-
T ss_pred -ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc----HHHHHHHHHc------------CC-
Confidence 2346789999999999865 699999999999999999999999965321 1111111110 00
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..+++++.+|+.+||+.||++|||++|+
T Consensus 247 -~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~ 280 (290)
T 3fpq_A 247 -KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp -CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -CCCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 0112233456679999999999999999998763
No 52
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=2.3e-33 Score=282.42 Aligned_cols=252 Identities=35% Similarity=0.569 Sum_probs=210.0
Q ss_pred cceeeccCCcccc--cCCccccCCCCCCEEEccC-CcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEE
Q 037488 137 MEIFWMHSCNISG--GIPEEISNLTNLIAIYLGG-NKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLD 213 (628)
Q Consensus 137 l~~l~l~~n~~~~--~~~~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~ 213 (628)
++.+++++|.+.+ .+|..|.++++|++|++++ |.+.+.+|..++.+++|++|+|++|++.+.+|..+.++++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 4444444455544 5566777788888888884 778777888888888888888888888877888888888888888
Q ss_pred ccCCcCcccCCCCccCCCCCcEEEccCCcCC-cCCCCccCCC-CCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCC
Q 037488 214 LGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-SIPSTLLNLK-DILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFS 291 (628)
Q Consensus 214 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 291 (628)
+++|.+++..|..|..+++|++|++++|+++ .+|..+..++ +|++|++++|.+++..|..+..+. |+.|++++|.++
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~ 210 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLE 210 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEE
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCccc
Confidence 8888888778888888888888888888887 5788888877 888888888888888888888887 899999999998
Q ss_pred CCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCc
Q 037488 292 GVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGS 371 (628)
Q Consensus 292 ~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~ 371 (628)
+..|..+..+++|+.|++++|++++.+|. +..+++|+.|++++|.+++.+|..+..+++|+.|++++|++++.+|....
T Consensus 211 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~ 289 (313)
T 1ogq_A 211 GDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGN 289 (313)
T ss_dssp ECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTT
T ss_pred CcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCcc
Confidence 88888888899999999999999866665 78889999999999999988899999999999999999999999998877
Q ss_pred ccccccccccCCCcccCCC
Q 037488 372 FRNFLAESFKGNELLCGMP 390 (628)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~ 390 (628)
+..+....+.+|+.+|+.|
T Consensus 290 l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 290 LQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp GGGSCGGGTCSSSEEESTT
T ss_pred ccccChHHhcCCCCccCCC
Confidence 8888888899999999865
No 53
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.4e-35 Score=290.86 Aligned_cols=178 Identities=19% Similarity=0.204 Sum_probs=134.7
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
+.|...+.||+|+||+||+|+. .+|+.||||+++.... +.+|++++++++|||||++++++.+++..
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 4577788999999999999997 6799999999975432 24799999999999999999987654321
Q ss_pred ------------------------------------------------------------ccccccccccccCcc---cc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQS---LI 515 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~---~~ 515 (628)
+|||+|+.+...... ..
T Consensus 133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~ 212 (336)
T 4g3f_A 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLT 212 (336)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----------
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceec
Confidence 499999976543211 11
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+||+.|||||++.+..|+.++||||+||++|||+||++||.+...... ...... .. ..
T Consensus 213 ~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~-~~~i~~----------------~~-~~ 274 (336)
T 4g3f_A 213 GDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL-CLKIAS----------------EP-PP 274 (336)
T ss_dssp -CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC-HHHHHH----------------SC-CG
T ss_pred CCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH-HHHHHc----------------CC-CC
Confidence 2345799999999999999999999999999999999999999976443321 111111 00 01
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
....+..+++++.+++.+||++||++|||+.|
T Consensus 275 ~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~e 306 (336)
T 4g3f_A 275 IREIPPSCAPLTAQAIQEGLRKEPVHRASAME 306 (336)
T ss_dssp GGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred chhcCccCCHHHHHHHHHHccCCHhHCcCHHH
Confidence 12244567888999999999999999999876
No 54
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=7.7e-33 Score=303.96 Aligned_cols=312 Identities=18% Similarity=0.234 Sum_probs=276.8
Q ss_pred CCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccc
Q 037488 55 NASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS 134 (628)
Q Consensus 55 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 134 (628)
.+.+++.|++++|.+..+++..|.++++|+.|+|++|.++.+++ ..|.++++|++|+|++|.++++.|..|+.++
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 123 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDT-----YAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP 123 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECT-----TTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCCh-----HHhcCCCCCCEEECCCCcCCCCCHHHHcCCC
Confidence 46889999999999999988889999999999999999998754 3588999999999999999999998888886
Q ss_pred cccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEc
Q 037488 135 QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDL 214 (628)
Q Consensus 135 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 214 (628)
.|+.|++++|.+.+..+..|+++++|+.|+|++|.+.+..|..|+.+++|++|++++|.+.+. .+..+++|+.|++
T Consensus 124 -~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---~~~~l~~L~~L~l 199 (597)
T 3oja_B 124 -LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANV 199 (597)
T ss_dssp -TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC---CGGGCTTCSEEEC
T ss_pred -CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc---Chhhhhhhhhhhc
Confidence 799999999999977777789999999999999999998888999999999999999999864 3567889999999
Q ss_pred cCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCC
Q 037488 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVI 294 (628)
Q Consensus 215 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 294 (628)
++|.+++. ...++|+.|++++|.++.+|..+. ++|+.|++++|.+++ +..+..+++|+.|+|++|.+++..
T Consensus 200 ~~n~l~~l-----~~~~~L~~L~ls~n~l~~~~~~~~--~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~ 270 (597)
T 3oja_B 200 SYNLLSTL-----AIPIAVEELDASHNSINVVRGPVN--VELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIM 270 (597)
T ss_dssp CSSCCSEE-----ECCTTCSEEECCSSCCCEEECSCC--SCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEE
T ss_pred ccCccccc-----cCCchhheeeccCCcccccccccC--CCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCC
Confidence 99998764 344689999999999998876553 689999999999986 367899999999999999999999
Q ss_pred ccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCcccc
Q 037488 295 PITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRN 374 (628)
Q Consensus 295 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~ 374 (628)
|..++.+++|+.|+|++|.+++ +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++++.. ...+..
T Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~~-i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~ 346 (597)
T 3oja_B 271 YHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLLH-VERNQPQFDRLENLYLDHNSIVTLK--LSTHHT 346 (597)
T ss_dssp SGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCCC-CGGGHHHHTTCSEEECCSSCCCCCC--CCTTCC
T ss_pred HHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCCc-cCcccccCCCCCEEECCCCCCCCcC--hhhcCC
Confidence 9999999999999999999985 56677889999999999999985 5667888999999999999998653 334667
Q ss_pred cccccccCCCcccC
Q 037488 375 FLAESFKGNELLCG 388 (628)
Q Consensus 375 ~~~~~~~~~~~~~~ 388 (628)
+....+.+|+..|.
T Consensus 347 L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 347 LKNLTLSHNDWDCN 360 (597)
T ss_dssp CSEEECCSSCEEHH
T ss_pred CCEEEeeCCCCCCh
Confidence 77788889988774
No 55
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=7.2e-35 Score=294.76 Aligned_cols=188 Identities=20% Similarity=0.332 Sum_probs=143.5
Q ss_pred HHHhhcCCCcccccccCCccEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccC-CCcceeeeecc
Q 037488 422 LFQATNGFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRH-RNLIKIISSCS 493 (628)
Q Consensus 422 l~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~ 493 (628)
+....++|...+.||+|+||+||+|++. .++.||||+++... ....+.|.+|+++|++++| ||||+++|+|.
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~ 138 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT 138 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEE
Confidence 3345678899999999999999999853 24689999997543 3445779999999999965 89999999885
Q ss_pred CCC-cc--------------------------------------------------------------------------
Q 037488 494 NDD-FK-------------------------------------------------------------------------- 498 (628)
Q Consensus 494 ~~~-~~-------------------------------------------------------------------------- 498 (628)
... ..
T Consensus 139 ~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 139 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 218 (353)
T ss_dssp CTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceee
Confidence 421 00
Q ss_pred --------ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccH
Q 037488 499 --------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTL 569 (628)
Q Consensus 499 --------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~ 569 (628)
+|||+|+.+.........++.+||+.|||||++.++.|+.++|||||||++|||+| |+.||.+...... +
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~-~ 297 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-F 297 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-H
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHH-H
Confidence 49999997655444334456689999999999999999999999999999999998 9999976432221 1
Q ss_pred HHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 570 KHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+.. ..++..|..+++++++++.+||+.||++||||.||
T Consensus 298 ~~~i~~------------------g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~ei 338 (353)
T 4ase_A 298 CRRLKE------------------GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 338 (353)
T ss_dssp HHHHHH------------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHc------------------CCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 111111 11223445677889999999999999999998764
No 56
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=6.1e-32 Score=274.68 Aligned_cols=287 Identities=18% Similarity=0.261 Sum_probs=137.9
Q ss_pred CCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccccc
Q 037488 58 KLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSM 137 (628)
Q Consensus 58 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l 137 (628)
+++.++++++.++.+ |..+. ++|+.|++++|.++.+++ ..+.++++|++|++++|.++++.|..|..++ .|
T Consensus 32 ~l~~l~~~~~~l~~l-p~~~~--~~l~~L~L~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L 102 (330)
T 1xku_A 32 HLRVVQCSDLGLEKV-PKDLP--PDTALLDLQNNKITEIKD-----GDFKNLKNLHTLILINNKISKISPGAFAPLV-KL 102 (330)
T ss_dssp ETTEEECTTSCCCSC-CCSCC--TTCCEEECCSSCCCCBCT-----TTTTTCTTCCEEECCSSCCCCBCTTTTTTCT-TC
T ss_pred CCeEEEecCCCcccc-CccCC--CCCeEEECCCCcCCEeCh-----hhhccCCCCCEEECCCCcCCeeCHHHhcCCC-CC
Confidence 445555555555443 22222 345555555555554432 1244555555555555555555455555443 45
Q ss_pred ceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccc--cCCccccCCCCCCEEEcc
Q 037488 138 EIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEG--SIPDDLCRLAALFQLDLG 215 (628)
Q Consensus 138 ~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~ 215 (628)
+.|++++|.+.. +|..+. ++|+.|++++|.+.+..+..+..+++|++|++++|.+.. ..+..+.++++|++|+++
T Consensus 103 ~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~ 179 (330)
T 1xku_A 103 ERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA 179 (330)
T ss_dssp CEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC
T ss_pred CEEECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECC
Confidence 555555555542 232222 455555555555554444445555555555555555532 334445555555555555
Q ss_pred CCcCcccCCCCccCCCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCC
Q 037488 216 SNKLSGFVPASFGNLTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVI 294 (628)
Q Consensus 216 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 294 (628)
+|.++.. |..+. ++|+.|++++|+++.+ |..+..+++|++|++++|.+++..+..+..+++|+.|++++|.++ .+
T Consensus 180 ~n~l~~l-~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 255 (330)
T 1xku_A 180 DTNITTI-PQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KV 255 (330)
T ss_dssp SSCCCSC-CSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SC
T ss_pred CCccccC-Ccccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cC
Confidence 5555432 22221 4555555555555543 334444555555555555555444444555555555555555554 34
Q ss_pred ccccCCCCCCCEEeCCCCcCcccCChhhcC------CCCCCEEECcCCcccc--cCchhhhcCCCCCEEEccCC
Q 037488 295 PITIGYLKDLQYLFLEYNRLQGSIPDSIGD------LINLKSLDLSNNNLSG--IIPISLEKLLDLKDINVSFN 360 (628)
Q Consensus 295 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~------l~~L~~L~l~~N~l~~--~~~~~~~~l~~L~~l~l~~N 360 (628)
|..+..+++|++|++++|++++..+..|.. ...++.|++++|.+.. +.|..|..+.+++.+++++|
T Consensus 256 p~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 256 PGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp CTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred ChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 444455555555555555555444443322 1344555555555432 33444555555555555554
No 57
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.2e-32 Score=276.91 Aligned_cols=287 Identities=21% Similarity=0.301 Sum_probs=179.3
Q ss_pred CCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhcccccc
Q 037488 58 KLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSM 137 (628)
Q Consensus 58 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l 137 (628)
+++.+++++|.++.+ |..+. ++|+.|++++|.++.+++ ..+.++++|++|++++|.++++.|..|..++ .|
T Consensus 34 ~l~~l~~~~~~l~~i-p~~~~--~~l~~L~l~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L 104 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAV-PKEIS--PDTTLLDLQNNDISELRK-----DDFKGLQHLYALVLVNNKISKIHEKAFSPLR-KL 104 (332)
T ss_dssp ETTEEECCSSCCSSC-CSCCC--TTCCEEECCSSCCCEECT-----TTTTTCTTCCEEECCSSCCCEECGGGSTTCT-TC
T ss_pred cCCEEECCCCCcccc-CCCCC--CCCeEEECCCCcCCccCH-----hHhhCCCCCcEEECCCCccCccCHhHhhCcC-CC
Confidence 566677777766654 33332 466777777776665533 2456667777777777777666666666664 56
Q ss_pred ceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCccc--ccCCccccCCCCCCEEEcc
Q 037488 138 EIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLE--GSIPDDLCRLAALFQLDLG 215 (628)
Q Consensus 138 ~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~--~~~p~~~~~l~~L~~L~L~ 215 (628)
+.|++++|.+.. +|..+. ++|++|++++|.+.+..+..+..+++|++|++++|.+. +..+..+..+ +|++|+++
T Consensus 105 ~~L~L~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~ 180 (332)
T 2ft3_A 105 QKLYISKNHLVE-IPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRIS 180 (332)
T ss_dssp CEEECCSSCCCS-CCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCC
T ss_pred CEEECCCCcCCc-cCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECc
Confidence 777777776663 333332 56777777777776555555666777777777777664 2455556555 67777777
Q ss_pred CCcCcccCCCCccCCCCCcEEEccCCcCCcCC-CCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCC
Q 037488 216 SNKLSGFVPASFGNLTNLRSLHLGSNQITSIP-STLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVI 294 (628)
Q Consensus 216 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 294 (628)
+|++++ +|..+. ++|+.|++++|.++.++ ..+..+++|++|++++|.+++..+..+..+++|+.|++++|+++ .+
T Consensus 181 ~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l 256 (332)
T 2ft3_A 181 EAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RV 256 (332)
T ss_dssp SSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BC
T ss_pred CCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ec
Confidence 777665 333332 56667777777776654 45566667777777777776666666666777777777777766 45
Q ss_pred ccccCCCCCCCEEeCCCCcCcccCChhhcCC------CCCCEEECcCCccc--ccCchhhhcCCCCCEEEccCCc
Q 037488 295 PITIGYLKDLQYLFLEYNRLQGSIPDSIGDL------INLKSLDLSNNNLS--GIIPISLEKLLDLKDINVSFNK 361 (628)
Q Consensus 295 p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l------~~L~~L~l~~N~l~--~~~~~~~~~l~~L~~l~l~~N~ 361 (628)
|..+..+++|++|++++|++++..+..|... ..|+.|++++|.+. ++.|..|..+++|+.+++++|+
T Consensus 257 p~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 257 PAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 5556666777777777777765555555432 45666777777665 4556666666777777776663
No 58
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.3e-34 Score=285.53 Aligned_cols=177 Identities=19% Similarity=0.251 Sum_probs=129.0
Q ss_pred cCCCcccccccCCccEEEEEEe----cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI----HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
++|+..+.||+|+||+||+|+. .+++.||||+++... ......+.+|++++++++|||||++++++.+++..
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999999975 247899999997532 22234678999999999999999999987654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... .
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~--~ 181 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE--K 181 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------C
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--c
Confidence 4999998654332 2
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...+.+||+.|||||++.+..|+.++||||+||++|||+||++||.+... ....... ....
T Consensus 182 ~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-----~~~~~~i------------~~~~-- 242 (304)
T 3ubd_A 182 KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR-----KETMTMI------------LKAK-- 242 (304)
T ss_dssp CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC--
T ss_pred cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH-----HHHHHHH------------HcCC--
Confidence 23567899999999999999999999999999999999999999975321 1111111 1111
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
...|..+++++++|+.+||++||++|||+.
T Consensus 243 --~~~p~~~s~~~~~li~~~L~~dP~~R~ta~ 272 (304)
T 3ubd_A 243 --LGMPQFLSPEAQSLLRMLFKRNPANRLGAG 272 (304)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTCS
T ss_pred --CCCCCcCCHHHHHHHHHHcccCHHHCCCCC
Confidence 122345677899999999999999999974
No 59
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=9.4e-33 Score=277.93 Aligned_cols=250 Identities=30% Similarity=0.503 Sum_probs=216.4
Q ss_pred CCCcEEEcccCCCCC--CCchHHhccccccceeeccC-CcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCC
Q 037488 110 KYLKYFSFSNNSLDG--ILPRAIGNLSQSMEIFWMHS-CNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQ 186 (628)
Q Consensus 110 ~~L~~L~l~~n~l~~--~~p~~~~~l~~~l~~l~l~~-n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 186 (628)
.+++.|++++|.+.+ .+|..+..++ .|+.|++++ |.+.+.+|..|.++++|++|++++|.+++.+|..+..+++|+
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~-~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 128 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLP-YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV 128 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCT-TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC
T ss_pred ceEEEEECCCCCccCCcccChhHhCCC-CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC
Confidence 467777777777776 6677777765 577777774 777777888888889999999999998888888888999999
Q ss_pred EeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCC-CCcEEEccCCcCC-cCCCCccCCCCCcEEEcCCC
Q 037488 187 LLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLT-NLRSLHLGSNQIT-SIPSTLLNLKDILYLNLSSN 264 (628)
Q Consensus 187 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~l~~n 264 (628)
+|++++|++.+.+|..+..+++|++|++++|++++..|..+..++ +|+.|++++|+++ .+|..+..++ |++|++++|
T Consensus 129 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N 207 (313)
T 1ogq_A 129 TLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRN 207 (313)
T ss_dssp EEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSS
T ss_pred EEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCC
Confidence 999999999888888888999999999999999888888888887 8999999999988 5777777776 999999999
Q ss_pred CCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCch
Q 037488 265 FFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPI 344 (628)
Q Consensus 265 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 344 (628)
.+++..|..|..+++|+.|++++|.+++.+|. +..+++|++|++++|++++.+|..+..+++|+.|++++|.+++.+|.
T Consensus 208 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~ 286 (313)
T 1ogq_A 208 MLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286 (313)
T ss_dssp EEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCC
T ss_pred cccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCC
Confidence 99988888999999999999999999877666 78889999999999999989999999999999999999999988887
Q ss_pred hhhcCCCCCEEEccCCcce
Q 037488 345 SLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 345 ~~~~l~~L~~l~l~~N~l~ 363 (628)
. ..+++|+.+++++|+.-
T Consensus 287 ~-~~l~~L~~l~l~~N~~l 304 (313)
T 1ogq_A 287 G-GNLQRFDVSAYANNKCL 304 (313)
T ss_dssp S-TTGGGSCGGGTCSSSEE
T ss_pred C-ccccccChHHhcCCCCc
Confidence 6 78899999999999844
No 60
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.6e-33 Score=279.22 Aligned_cols=191 Identities=19% Similarity=0.234 Sum_probs=128.5
Q ss_pred cCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----c---
Q 037488 427 NGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF-----K--- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-----~--- 498 (628)
.+|...+.||+|+||+||+|++. |+.||||+++..... ...+.+|+..+.+++|||||+++|+|.+++. .
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 34677789999999999999884 899999999754332 2233457777788999999999998864321 0
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 499 ---------------------------------------------------------------------ADFGMAKPLLK 509 (628)
Q Consensus 499 ---------------------------------------------------------------------~DFGla~~~~~ 509 (628)
+|||+|+....
T Consensus 81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 49999987643
Q ss_pred cCcc--cccccccccccccCccccccC------ccCcccchhhHhHHHHHHhhCCCCCCcccCCC----------ccHHH
Q 037488 510 EDQS--LIQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----------MTLKH 571 (628)
Q Consensus 510 ~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~----------~~~~~ 571 (628)
.... ....+.+||++|||||++.+. .|+.++|||||||++|||+||++||....... .....
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred CCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHH
Confidence 3221 122345799999999998754 57899999999999999999988775422211 11122
Q ss_pred HHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 572 WVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+...... .......+. .....+++..+.+|+.+||+.||++||||.||
T Consensus 241 ~~~~~~~--------~~~rp~~p~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 288 (303)
T 3hmm_A 241 MRKVVCE--------QKLRPNIPN-RWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp HHHHHTT--------SCCCCCCCG-GGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred HHHHHhc--------ccCCCCCCc-cccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence 2111111 111001000 11123467789999999999999999999764
No 61
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=3.7e-33 Score=276.59 Aligned_cols=180 Identities=21% Similarity=0.294 Sum_probs=122.8
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC--------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD-------- 496 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 496 (628)
++|+..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4588899999999999999987 679999999997643 334567899999999999999999998753211
Q ss_pred -----------------cc--------------------------------------------------------ccccc
Q 037488 497 -----------------FK--------------------------------------------------------ADFGM 503 (628)
Q Consensus 497 -----------------~~--------------------------------------------------------~DFGl 503 (628)
.. +|||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCcc
Confidence 00 49999
Q ss_pred cccccccCcc----------cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHH
Q 037488 504 AKPLLKEDQS----------LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWV 573 (628)
Q Consensus 504 a~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~ 573 (628)
|+.+...... ...++.+||+.|||||++.+..|+.++||||+||++|||++ ||.... ......
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~~~~ 237 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERVRTL 237 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHHHHH
Confidence 9976432211 12234679999999999999999999999999999999996 775321 111111
Q ss_pred HhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 574 NDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
... ..... ++.+...++++.+|+.+||+.||++|||+.|+
T Consensus 238 ~~~------------~~~~~---p~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 277 (299)
T 4g31_A 238 TDV------------RNLKF---PPLFTQKYPCEYVMVQDMLSPSPMERPEAINI 277 (299)
T ss_dssp HHH------------HTTCC---CHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHH------------hcCCC---CCCCcccCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 100 00000 11223344567899999999999999998753
No 62
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.97 E-value=2.7e-32 Score=280.92 Aligned_cols=202 Identities=22% Similarity=0.191 Sum_probs=137.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+++|+.++|||||++++++.....
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999999987 67999999999653 23456778999999999999999999987643210
Q ss_pred --c----------------------------------------------------------------ccccccccccccC
Q 037488 498 --K----------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 498 --~----------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
. +|||+|+.+....
T Consensus 133 ~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~ 212 (398)
T 4b99_A 133 SVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP 212 (398)
T ss_dssp CEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC----
T ss_pred EEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCc
Confidence 0 4999999764321
Q ss_pred --cccccccccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC--ccceeec
Q 037488 512 --QSLIQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI--SVMKVVD 586 (628)
Q Consensus 512 --~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 586 (628)
......+.+||++|||||++.+.. |+.++||||+||++|||++|++||.+.... ..+.......... .....+.
T Consensus 213 ~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~~~~~ 291 (398)
T 4b99_A 213 AEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVIQAVG 291 (398)
T ss_dssp ---CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGTC---
T ss_pred cccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhhh
Confidence 122335678999999999988754 699999999999999999999999753211 1111111111110 0000000
Q ss_pred -----ccccC---Cccc-chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 -----AHLLS---QEDK-HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 -----~~~~~---~~~~-~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... .... ........+.++++|+.+||++||++|||+.|+
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 342 (398)
T 4b99_A 292 AERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342 (398)
T ss_dssp --CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred hhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHH
Confidence 00000 0000 001122456789999999999999999998763
No 63
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.97 E-value=7.6e-32 Score=291.42 Aligned_cols=183 Identities=16% Similarity=0.163 Sum_probs=142.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.++|+..+.||+|+||.||+|+. .+|+.||+|++........+.+.+|+++|+.++|||||++++++.++...
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 36799999999999999999987 67999999999876666667889999999999999999999876543211
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+.+.... .
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~---~ 312 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ---S 312 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS---E
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC---c
Confidence 4999999765432 2
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
..+.+||+.|||||++.+..|+.++||||+||++|||++|++||.+.... ..... ........
T Consensus 313 ~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-----~~~~~------------i~~~~~~~ 375 (573)
T 3uto_A 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-----ETLRN------------VKSCDWNM 375 (573)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-----HHHHH------------HHTTCCCC
T ss_pred eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-----HHHHH------------HHhCCCCC
Confidence 34568999999999999999999999999999999999999999753211 11111 11111111
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++++|+.+||+.||++|||+.|+
T Consensus 376 ~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~ 408 (573)
T 3uto_A 376 DDSAFSGISEDGKDFIRKLLLADPNTRMTIHQA 408 (573)
T ss_dssp CSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CcccccCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 222334567789999999999999999998753
No 64
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.6e-33 Score=298.75 Aligned_cols=331 Identities=19% Similarity=0.174 Sum_probs=209.3
Q ss_pred CCCCEEEccCCccee----cCCccccCCCCCCEEeccCCcccccCcccc-CCCC----CCCEEEccCccccCCCCCCccc
Q 037488 33 QNLEELLLWGNNFSG----TIPSFIFNASKLSRLELQMNSFYGFIPNTF-GNLR----NLNRLGLNDNYLTSSTPKLNFL 103 (628)
Q Consensus 33 ~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f-~~l~----~L~~L~L~~N~l~~~~~~~~~~ 103 (628)
++|++|+|++|.++. .++..+..+++|++|+|++|.+....+..+ ..+. +|++|++++|.++..... ...
T Consensus 28 ~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~-~l~ 106 (461)
T 1z7x_W 28 QQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG-VLS 106 (461)
T ss_dssp TTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH-HHH
T ss_pred CCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH-HHH
Confidence 355566666666553 234556666777777777777655433322 2344 577777777766532100 012
Q ss_pred ccccCCCCCcEEEcccCCCCCCCchHHhcc----ccccceeeccCCcccccC----CccccCCCCCCEEEccCCcCCccc
Q 037488 104 SSLSNCKYLKYFSFSNNSLDGILPRAIGNL----SQSMEIFWMHSCNISGGI----PEEISNLTNLIAIYLGGNKLNGSI 175 (628)
Q Consensus 104 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l----~~~l~~l~l~~n~~~~~~----~~~~~~l~~L~~L~L~~n~l~~~~ 175 (628)
..+.++++|++|++++|.+.+..+..+... ...|+.|++++|.+++.. +..+..+++|+.|++++|.+....
T Consensus 107 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~ 186 (461)
T 1z7x_W 107 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAG 186 (461)
T ss_dssp HHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHH
T ss_pred HHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHH
Confidence 345666777777777777654444433321 124677777777666532 445566778888888888776543
Q ss_pred ccccc-----CCCCCCEeecccCccccc----CCccccCCCCCCEEEccCCcCcccC-----CCCccCCCCCcEEEccCC
Q 037488 176 PIALG-----KLQKLQLLNLEYNQLEGS----IPDDLCRLAALFQLDLGSNKLSGFV-----PASFGNLTNLRSLHLGSN 241 (628)
Q Consensus 176 p~~~~-----~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~-----~~~~~~l~~L~~L~L~~n 241 (628)
+..+. .+++|++|++++|.++.. ++..+..+++|++|++++|.+.... +..+..+++|+.|++++|
T Consensus 187 ~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n 266 (461)
T 1z7x_W 187 VRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWEC 266 (461)
T ss_dssp HHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTS
T ss_pred HHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCC
Confidence 33332 255788888888877653 3555667778888888888776432 223345678888888888
Q ss_pred cCCc-----CCCCccCCCCCcEEEcCCCCCcCCCCCccc-----CCccccEEEcCCCcCCCC----CccccCCCCCCCEE
Q 037488 242 QITS-----IPSTLLNLKDILYLNLSSNFFTGPLPLEIG-----NLKVLIKIDLSMNNFSGV----IPITIGYLKDLQYL 307 (628)
Q Consensus 242 ~l~~-----lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L 307 (628)
.++. ++..+..+++|++|++++|.++...+..+. ..++|+.|++++|.+++. ++..+..+++|++|
T Consensus 267 ~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L 346 (461)
T 1z7x_W 267 GITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLEL 346 (461)
T ss_dssp CCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEE
T ss_pred CCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEE
Confidence 8776 566666677888888888877543332222 225788888888887754 34455566788888
Q ss_pred eCCCCcCcccCChhhcC-----CCCCCEEECcCCcccc----cCchhhhcCCCCCEEEccCCccee
Q 037488 308 FLEYNRLQGSIPDSIGD-----LINLKSLDLSNNNLSG----IIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 308 ~l~~n~~~~~~~~~~~~-----l~~L~~L~l~~N~l~~----~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
++++|++++..+..+.. .++|+.|++++|.+++ .++..+..+++|++|++++|++++
T Consensus 347 ~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~ 412 (461)
T 1z7x_W 347 QISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGD 412 (461)
T ss_dssp ECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCH
T ss_pred EccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCH
Confidence 88888876554444432 5678888888888875 556677778888888888887764
No 65
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.97 E-value=6.9e-31 Score=267.54 Aligned_cols=137 Identities=19% Similarity=0.218 Sum_probs=106.2
Q ss_pred HhhcCCCcccccccCCccEEEEEEe----cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI----HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 498 (628)
...+.|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+|+++++.+ +|||||++++++.+++..
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 3467899999999999999999975 247899999986543 234578999999998 699999998876543321
Q ss_pred ----------------------------------------------------------------ccccccccccccCc--
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQ-- 512 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~-- 512 (628)
+|||+|+.......
T Consensus 96 ~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~ 175 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175 (361)
T ss_dssp EEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGG
T ss_pred EEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccc
Confidence 49999986532210
Q ss_pred ------------------------ccccccccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcc
Q 037488 513 ------------------------SLIQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEI 562 (628)
Q Consensus 513 ------------------------~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~ 562 (628)
....++.+||++|||||++.+.+ |+.++||||+||++|||+||+.||...
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp GGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCC
Confidence 01123457999999999998764 899999999999999999999999643
No 66
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1.2e-32 Score=293.74 Aligned_cols=362 Identities=19% Similarity=0.152 Sum_probs=279.1
Q ss_pred CcccCCCcccCCChh-ccCCCCCCEEecCccCC---------------CCCCEEEccCCcceecCCccc-cCCC----CC
Q 037488 1 MAFSFNKLVGVVPTT-IFNVSTLNSLYLQNVQL---------------QNLEELLLWGNNFSGTIPSFI-FNAS----KL 59 (628)
Q Consensus 1 l~ls~N~l~~~~p~~-~~~l~~L~~L~l~~n~l---------------~~L~~L~ls~N~l~~~~p~~~-~~l~----~L 59 (628)
|||++|+++...... +..+++|++|++++|.+ ++|++|+|++|.++...+..+ ..++ +|
T Consensus 8 L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L 87 (461)
T 1z7x_W 8 LDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKI 87 (461)
T ss_dssp EEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCC
T ss_pred hhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCce
Confidence 589999998765444 88899999999999873 689999999999986544433 3455 79
Q ss_pred CEEeccCCcccc----cCccccCCCCCCCEEEccCccccCCCCCCccccc-ccCCCCCcEEEcccCCCCCCC----chHH
Q 037488 60 SRLELQMNSFYG----FIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSS-LSNCKYLKYFSFSNNSLDGIL----PRAI 130 (628)
Q Consensus 60 ~~L~L~~N~l~~----~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~~----p~~~ 130 (628)
++|+|++|+++. .++..|..+++|++|++++|.++...... .... ....++|++|++++|.+++.. +..+
T Consensus 88 ~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~-l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l 166 (461)
T 1z7x_W 88 QKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQL-LCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVL 166 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHH-HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHH
T ss_pred eEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHH-HHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHH
Confidence 999999999984 45888999999999999999987431100 0011 234678999999999998754 4445
Q ss_pred hccccccceeeccCCcccccCCcccc-----CCCCCCEEEccCCcCCcc----ccccccCCCCCCEeecccCcccccC--
Q 037488 131 GNLSQSMEIFWMHSCNISGGIPEEIS-----NLTNLIAIYLGGNKLNGS----IPIALGKLQKLQLLNLEYNQLEGSI-- 199 (628)
Q Consensus 131 ~~l~~~l~~l~l~~n~~~~~~~~~~~-----~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~~-- 199 (628)
..++ .|+.|++++|.+....+..+. ..++|+.|++++|.+++. ++..+..+++|++|++++|++....
T Consensus 167 ~~~~-~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~ 245 (461)
T 1z7x_W 167 RAKP-DFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMA 245 (461)
T ss_dssp HHCT-TCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred hhCC-CCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHH
Confidence 5555 799999999998765444443 367999999999999864 5677888999999999999987532
Q ss_pred ---CccccCCCCCCEEEccCCcCccc----CCCCccCCCCCcEEEccCCcCCcC-----CCCcc-CCCCCcEEEcCCCCC
Q 037488 200 ---PDDLCRLAALFQLDLGSNKLSGF----VPASFGNLTNLRSLHLGSNQITSI-----PSTLL-NLKDILYLNLSSNFF 266 (628)
Q Consensus 200 ---p~~~~~l~~L~~L~L~~n~l~~~----~~~~~~~l~~L~~L~L~~n~l~~l-----p~~~~-~l~~L~~L~l~~n~l 266 (628)
+..+..+++|++|++++|.++.. ++..+..+++|++|++++|.++.. ...+. ..++|++|++++|.+
T Consensus 246 ~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l 325 (461)
T 1z7x_W 246 ELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSF 325 (461)
T ss_dssp HHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCC
Confidence 22234689999999999999864 466677899999999999998642 22222 236999999999999
Q ss_pred cCC----CCCcccCCccccEEEcCCCcCCCCCccccCC-----CCCCCEEeCCCCcCcc----cCChhhcCCCCCCEEEC
Q 037488 267 TGP----LPLEIGNLKVLIKIDLSMNNFSGVIPITIGY-----LKDLQYLFLEYNRLQG----SIPDSIGDLINLKSLDL 333 (628)
Q Consensus 267 ~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l 333 (628)
++. ++..+..+++|++|++++|.+++..+..+.. .++|++|++++|++++ .+|..+..+++|+.|++
T Consensus 326 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l 405 (461)
T 1z7x_W 326 TAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 405 (461)
T ss_dssp BGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEEC
T ss_pred chHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEEC
Confidence 865 3455677899999999999987654443332 6799999999999986 67888889999999999
Q ss_pred cCCcccccCchhhh-----cCCCCCEEEccCCccee
Q 037488 334 SNNNLSGIIPISLE-----KLLDLKDINVSFNKLEG 364 (628)
Q Consensus 334 ~~N~l~~~~~~~~~-----~l~~L~~l~l~~N~l~~ 364 (628)
++|.+++.....+. ...+|+.|++.++.+..
T Consensus 406 ~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 406 SNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred CCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 99999764322222 24468889888776553
No 67
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=260.32 Aligned_cols=280 Identities=18% Similarity=0.205 Sum_probs=173.4
Q ss_pred CCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccc
Q 037488 55 NASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS 134 (628)
Q Consensus 55 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 134 (628)
.++.....++++|.++.++ ..+. ++|++|++++|.++.+++ ..+.++++|++|++++|.++++.|..
T Consensus 29 ~C~~~~~c~~~~~~l~~iP-~~~~--~~L~~L~l~~n~i~~~~~-----~~~~~l~~L~~L~L~~n~l~~~~~~~----- 95 (353)
T 2z80_A 29 SCDRNGICKGSSGSLNSIP-SGLT--EAVKSLDLSNNRITYISN-----SDLQRCVNLQALVLTSNGINTIEEDS----- 95 (353)
T ss_dssp EECTTSEEECCSTTCSSCC-TTCC--TTCCEEECTTSCCCEECT-----TTTTTCTTCCEEECTTSCCCEECTTT-----
T ss_pred CCCCCeEeeCCCCCccccc-cccc--ccCcEEECCCCcCcccCH-----HHhccCCCCCEEECCCCccCccCHhh-----
Confidence 3555566778888887653 3333 477888888887776543 24677777888888777776554444
Q ss_pred cccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCC-ccccCCCCCCEEE
Q 037488 135 QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIP-DDLCRLAALFQLD 213 (628)
Q Consensus 135 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~ 213 (628)
|.++++|++|++++|++++..+..+..+++|++|++++|++.+..+ ..+..+++|++|+
T Consensus 96 --------------------~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~ 155 (353)
T 2z80_A 96 --------------------FSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILR 155 (353)
T ss_dssp --------------------TTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred --------------------cCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEE
Confidence 4445555555555555554333335555555555555555553222 2455555555555
Q ss_pred ccCC-cCcccCCCCccCCCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCC
Q 037488 214 LGSN-KLSGFVPASFGNLTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFS 291 (628)
Q Consensus 214 L~~n-~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 291 (628)
+++| .+....+..|..+++|+.|++++|.++.+ |..+..+++|++|++++|.++...+..+..+++|+.|++++|.++
T Consensus 156 l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 156 VGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 5555 34444445555555555555555555543 445555555555555555554333333344556666666666665
Q ss_pred CCCcccc---CCCCCCCEEeCCCCcCcc----cCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCccee
Q 037488 292 GVIPITI---GYLKDLQYLFLEYNRLQG----SIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 292 ~~~p~~~---~~l~~L~~L~l~~n~~~~----~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
+..+..+ .....++.++++++.+.+ .+|..+..+++|+.|++++|+++.+.+..|..+++|+.|++++|++.+
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccC
Confidence 5443322 234567777777777764 467788899999999999999986655557889999999999999988
Q ss_pred cCC
Q 037488 365 EIP 367 (628)
Q Consensus 365 ~~p 367 (628)
.+|
T Consensus 316 ~~~ 318 (353)
T 2z80_A 316 SCP 318 (353)
T ss_dssp CHH
T ss_pred cCC
Confidence 765
No 68
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.9e-29 Score=250.41 Aligned_cols=249 Identities=20% Similarity=0.243 Sum_probs=171.8
Q ss_pred CEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccce
Q 037488 60 SRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEI 139 (628)
Q Consensus 60 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~ 139 (628)
+.++.+++.++.++. .+. ++|+.|++++|.++.+++. .|.++++|++|++++|.++...
T Consensus 10 ~~l~c~~~~l~~ip~-~~~--~~l~~L~L~~n~l~~i~~~-----~~~~l~~L~~L~L~~n~l~~~~------------- 68 (306)
T 2z66_A 10 TEIRCNSKGLTSVPT-GIP--SSATRLELESNKLQSLPHG-----VFDKLTQLTKLSLSSNGLSFKG------------- 68 (306)
T ss_dssp TEEECCSSCCSSCCS-CCC--TTCCEEECCSSCCCCCCTT-----TTTTCTTCSEEECCSSCCCEEE-------------
T ss_pred CEEEcCCCCcccCCC-CCC--CCCCEEECCCCccCccCHh-----HhhccccCCEEECCCCccCccc-------------
Confidence 467778887776543 332 5788888888888766542 3677788888888888775221
Q ss_pred eeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCC-ccccCCCCCCEEEccCCc
Q 037488 140 FWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIP-DDLCRLAALFQLDLGSNK 218 (628)
Q Consensus 140 l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~ 218 (628)
..+..+..+++|++|++++|.+. .+|..+..+++|++|++++|++.+..+ ..+..+++|++|++++|.
T Consensus 69 ----------~~~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 69 ----------CCSQSDFGTTSLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp ----------EEEHHHHSCSCCCEEECCSCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred ----------CcccccccccccCEEECCCCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 11233445677777888877776 455567777888888888887775544 467777778888888887
Q ss_pred CcccCCCCccCCCCCcEEEccCCcCCc--CCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCcc
Q 037488 219 LSGFVPASFGNLTNLRSLHLGSNQITS--IPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPI 296 (628)
Q Consensus 219 l~~~~~~~~~~l~~L~~L~L~~n~l~~--lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 296 (628)
+.+..+..|..+++|++|++++|.+++ +|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++..+.
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred CCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 777777777777777777777777765 566666777777777777777766666677777777777777777666555
Q ss_pred ccCCCCCCCEEeCCCCcCcccCChhhcCCC-CCCEEECcCCcccc
Q 037488 297 TIGYLKDLQYLFLEYNRLQGSIPDSIGDLI-NLKSLDLSNNNLSG 340 (628)
Q Consensus 297 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~N~l~~ 340 (628)
.+..+++|++|++++|++++..|..+..++ +|+.|++++|.++.
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 666666677777777776666666666663 66666666666654
No 69
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.4e-29 Score=252.66 Aligned_cols=249 Identities=23% Similarity=0.285 Sum_probs=183.9
Q ss_pred CEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEE
Q 037488 36 EELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYF 115 (628)
Q Consensus 36 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L 115 (628)
+.++++++.++. +|..+ .++|++|+|++|+++.+.+..|.++++|+.|++++|.++.... ....+..+++|++|
T Consensus 10 ~~l~c~~~~l~~-ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~---~~~~~~~~~~L~~L 83 (306)
T 2z66_A 10 TEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGC---CSQSDFGTTSLKYL 83 (306)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEE---EEHHHHSCSCCCEE
T ss_pred CEEEcCCCCccc-CCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccC---cccccccccccCEE
Confidence 467788888874 44433 3689999999999998877788999999999999998875321 01245567888888
Q ss_pred EcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCcccc-ccccCCCCCCEeecccCc
Q 037488 116 SFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIP-IALGKLQKLQLLNLEYNQ 194 (628)
Q Consensus 116 ~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~ 194 (628)
++++|.+.. +|..+..+++|+.|++++|.+.+..+ ..+..+++|++|++++|.
T Consensus 84 ~Ls~n~i~~--------------------------l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~ 137 (306)
T 2z66_A 84 DLSFNGVIT--------------------------MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH 137 (306)
T ss_dssp ECCSCSEEE--------------------------EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC
T ss_pred ECCCCcccc--------------------------ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc
Confidence 888887652 12345566777777777777765444 457777777777777777
Q ss_pred ccccCCccccCCCCCCEEEccCCcCcc-cCCCCccCCCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCC
Q 037488 195 LEGSIPDDLCRLAALFQLDLGSNKLSG-FVPASFGNLTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPL 272 (628)
Q Consensus 195 l~~~~p~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~ 272 (628)
+.+..+..+..+++|++|++++|.+.+ ..|..+..+++|+.|++++|.++.+ |..+..+++|++|++++|.+++..+.
T Consensus 138 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 217 (306)
T 2z66_A 138 TRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTF 217 (306)
T ss_dssp CEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSG
T ss_pred CCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChh
Confidence 777777777777777777777777765 4677777777888888888877775 45666777788888888887776666
Q ss_pred cccCCccccEEEcCCCcCCCCCccccCCC-CCCCEEeCCCCcCcc
Q 037488 273 EIGNLKVLIKIDLSMNNFSGVIPITIGYL-KDLQYLFLEYNRLQG 316 (628)
Q Consensus 273 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~l~~n~~~~ 316 (628)
.+..+++|+.|++++|.+++..|..+..+ ++|++|++++|++++
T Consensus 218 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 218 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp GGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred hccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 77778888888888888887777777776 478888888888764
No 70
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4.3e-28 Score=256.27 Aligned_cols=214 Identities=24% Similarity=0.293 Sum_probs=119.6
Q ss_pred CCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCC
Q 037488 151 IPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNL 230 (628)
Q Consensus 151 ~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 230 (628)
.+..|.++++|+.|+|++|.+.+..+..|.++++|++|+|++|+++...+..|..+++|++|+|++|+++...+..|..+
T Consensus 80 ~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l 159 (440)
T 3zyj_A 80 KVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRI 159 (440)
T ss_dssp CTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTC
T ss_pred CHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhC
Confidence 33444445555555555555554444445555555555555555554444445555555555555555554444455555
Q ss_pred CCCcEEEccC-CcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEe
Q 037488 231 TNLRSLHLGS-NQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLF 308 (628)
Q Consensus 231 ~~L~~L~L~~-n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 308 (628)
++|+.|++++ |.+..++. .+..+++|++|++++|.++.. | .+..+++|+.|+|++|.+++..|..|..+++|+.|+
T Consensus 160 ~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 237 (440)
T 3zyj_A 160 PSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLW 237 (440)
T ss_dssp TTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEE
Confidence 5555555554 33334433 344455555555555555532 2 245556666666666666655566666666666666
Q ss_pred CCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecC
Q 037488 309 LEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 309 l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
+++|++++..+..|.++++|+.|+|++|+++++.+..|..+++|+.|++++|++.+..
T Consensus 238 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 238 MIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp CTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCC
Confidence 6666666666666666666666666666666666666666666666666666665543
No 71
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.3e-29 Score=258.17 Aligned_cols=279 Identities=18% Similarity=0.170 Sum_probs=196.8
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 32 LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 32 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
++.....++++|.++. +|..+. ++|++|++++|+++++.+..|.++++|+.|++++|.++.+.+ ..+.++++
T Consensus 30 C~~~~~c~~~~~~l~~-iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-----~~~~~l~~ 101 (353)
T 2z80_A 30 CDRNGICKGSSGSLNS-IPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEE-----DSFSSLGS 101 (353)
T ss_dssp ECTTSEEECCSTTCSS-CCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECT-----TTTTTCTT
T ss_pred CCCCeEeeCCCCCccc-cccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCH-----hhcCCCCC
Confidence 4555678889999884 455443 589999999999999888899999999999999999987654 35788999
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCcccc-ccccCCCCCCEeec
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIP-IALGKLQKLQLLNL 190 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L 190 (628)
|++|++++|.++++.+..| .++++|++|++++|++.+..+ ..+..+++|++|++
T Consensus 102 L~~L~Ls~n~l~~~~~~~~-------------------------~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWF-------------------------KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 156 (353)
T ss_dssp CCEEECCSSCCSSCCHHHH-------------------------TTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEE
T ss_pred CCEEECCCCcCCcCCHhHh-------------------------CCCccCCEEECCCCCCcccCchhhhccCCCCcEEEC
Confidence 9999999999886544434 345556666666666653322 24566666666666
Q ss_pred ccC-cccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCcc-CCCCCcEEEcCCCCCcC
Q 037488 191 EYN-QLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLL-NLKDILYLNLSSNFFTG 268 (628)
Q Consensus 191 ~~n-~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~-~l~~L~~L~l~~n~l~~ 268 (628)
++| .+.+..+..+.++++|++|++++|.+++..|..+..+++|++|++++|.++.+|..+. .+++|++|++++|.+++
T Consensus 157 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~ 236 (353)
T 2z80_A 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDT 236 (353)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTT
T ss_pred CCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccc
Confidence 666 3554555566666666666666666666666666666677777777766666654433 35666777777776665
Q ss_pred CCCCcc---cCCccccEEEcCCCcCCC----CCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCccccc
Q 037488 269 PLPLEI---GNLKVLIKIDLSMNNFSG----VIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGI 341 (628)
Q Consensus 269 ~~~~~~---~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 341 (628)
..+..+ .....++.++++++.+++ .+|..+..+++|++|++++|+++...+..|..+++|+.|++++|.+.+.
T Consensus 237 ~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 237 FHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp CCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred ccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 444332 234567777888877765 3566778899999999999999854444468999999999999999865
Q ss_pred Cc
Q 037488 342 IP 343 (628)
Q Consensus 342 ~~ 343 (628)
.|
T Consensus 317 ~~ 318 (353)
T 2z80_A 317 CP 318 (353)
T ss_dssp HH
T ss_pred CC
Confidence 44
No 72
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=6e-28 Score=256.14 Aligned_cols=230 Identities=22% Similarity=0.250 Sum_probs=180.2
Q ss_pred ccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEcc
Q 037488 136 SMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLG 215 (628)
Q Consensus 136 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 215 (628)
.++.|++++|++.+..+..|.++++|+.|+|++|.+.+..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 76 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 155 (452)
T 3zyi_A 76 NTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLR 155 (452)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECC
T ss_pred CccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECC
Confidence 45555555555555566677777888888888888877777778888888888888888876666667778888888888
Q ss_pred CCcCcccCCCCccCCCCCcEEEccC-CcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCC
Q 037488 216 SNKLSGFVPASFGNLTNLRSLHLGS-NQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGV 293 (628)
Q Consensus 216 ~n~l~~~~~~~~~~l~~L~~L~L~~-n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 293 (628)
+|+++...+..|..+++|+.|++++ |.+..++. .+..+++|++|++++|.+++. | .+..+++|+.|+|++|.+++.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 156 NNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEI 233 (452)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEE
T ss_pred CCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCccc
Confidence 8888777777788888888888877 55666655 466778888888888888754 3 477788888888888888888
Q ss_pred CccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 294 IPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 294 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
.|..|..+++|+.|++++|++++..+..|..+++|+.|++++|+++++.+..|..+++|+.|++++|++.+...
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~ 307 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNCDCD 307 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEECSTT
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCCCCC
Confidence 88888888888888888888888888888888888888888888888777778888888889998888876553
No 73
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=4.2e-28 Score=257.34 Aligned_cols=246 Identities=24% Similarity=0.242 Sum_probs=197.5
Q ss_pred CEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCE
Q 037488 84 NRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIA 163 (628)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~ 163 (628)
+.++.+++.++.+|..+ .++|++|+|++|.++++.|..|..++ .|+.|++++|.+.+..+..|.++++|+.
T Consensus 57 ~~v~c~~~~l~~iP~~~--------~~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 127 (452)
T 3zyi_A 57 SKVVCTRRGLSEVPQGI--------PSNTRYLNLMENNIQMIQADTFRHLH-HLEVLQLGRNSIRQIEVGAFNGLASLNT 127 (452)
T ss_dssp CEEECCSSCCSSCCSCC--------CTTCSEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCE
T ss_pred cEEEECCCCcCccCCCC--------CCCccEEECcCCcCceECHHHcCCCC-CCCEEECCCCccCCcChhhccCcccCCE
Confidence 44555555555544321 13555666666666555555555554 4666666666666666677888889999
Q ss_pred EEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccC-CcCcccCCCCccCCCCCcEEEccCCc
Q 037488 164 IYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGS-NKLSGFVPASFGNLTNLRSLHLGSNQ 242 (628)
Q Consensus 164 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~~n~ 242 (628)
|+|++|++++..+..|..+++|++|+|++|++....+..|.++++|++|++++ |.+....+..|..+++|+.|+|++|+
T Consensus 128 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 128 LELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp EECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred EECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 99999999877777788899999999999999877777888999999999998 55665556678999999999999999
Q ss_pred CCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhh
Q 037488 243 ITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSI 322 (628)
Q Consensus 243 l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~ 322 (628)
++.+| .+..+++|++|++++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|++++..+..|
T Consensus 208 l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 286 (452)
T 3zyi_A 208 IKDMP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLF 286 (452)
T ss_dssp CSSCC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSS
T ss_pred ccccc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHh
Confidence 99887 47788999999999999998888899999999999999999998888889999999999999999998778888
Q ss_pred cCCCCCCEEECcCCccc
Q 037488 323 GDLINLKSLDLSNNNLS 339 (628)
Q Consensus 323 ~~l~~L~~L~l~~N~l~ 339 (628)
..+++|+.|++++|.+.
T Consensus 287 ~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 287 TPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTCTTCCEEECCSSCEE
T ss_pred ccccCCCEEEccCCCcC
Confidence 89999999999999875
No 74
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.5e-28 Score=254.03 Aligned_cols=249 Identities=23% Similarity=0.241 Sum_probs=228.4
Q ss_pred CCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCC
Q 037488 81 RNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN 160 (628)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~ 160 (628)
...+.++.+++.++.+|..+ .++++.|+|++|+++++.+..|..++ .|+.|++++|.+.+..+..|.++++
T Consensus 43 ~~~~~v~c~~~~l~~iP~~~--------~~~l~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~n~i~~i~~~~~~~l~~ 113 (440)
T 3zyj_A 43 NQFSKVICVRKNLREVPDGI--------STNTRLLNLHENQIQIIKVNSFKHLR-HLEILQLSRNHIRTIEIGAFNGLAN 113 (440)
T ss_dssp TTSCEEECCSCCCSSCCSCC--------CTTCSEEECCSCCCCEECTTTTSSCS-SCCEEECCSSCCCEECGGGGTTCSS
T ss_pred CCCCEEEeCCCCcCcCCCCC--------CCCCcEEEccCCcCCeeCHHHhhCCC-CCCEEECCCCcCCccChhhccCCcc
Confidence 34678999999999887643 26899999999999999889998886 7999999999999988899999999
Q ss_pred CCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccC-CcCcccCCCCccCCCCCcEEEcc
Q 037488 161 LIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGS-NKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 161 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
|+.|+|++|+++...+..|..+++|++|+|++|++....+..|.++++|++|++++ |.+....+..|.++++|+.|+|+
T Consensus 114 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~ 193 (440)
T 3zyj_A 114 LNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLA 193 (440)
T ss_dssp CCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECT
T ss_pred CCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCC
Confidence 99999999999977777899999999999999999988888899999999999999 55665666689999999999999
Q ss_pred CCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCC
Q 037488 240 SNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319 (628)
Q Consensus 240 ~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 319 (628)
+|.++.+|. +..+++|++|++++|.+++..|..|.++++|+.|+|++|++++..+..|..+++|++|+|++|++++..+
T Consensus 194 ~n~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 272 (440)
T 3zyj_A 194 MCNLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPH 272 (440)
T ss_dssp TSCCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCT
T ss_pred CCcCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccCh
Confidence 999999984 7789999999999999999989999999999999999999999999999999999999999999998888
Q ss_pred hhhcCCCCCCEEECcCCccc
Q 037488 320 DSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 320 ~~~~~l~~L~~L~l~~N~l~ 339 (628)
..|..+++|+.|++++|.+.
T Consensus 273 ~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 273 DLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TTTSSCTTCCEEECCSSCEE
T ss_pred hHhccccCCCEEEcCCCCcc
Confidence 88999999999999999985
No 75
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.7e-28 Score=246.81 Aligned_cols=195 Identities=23% Similarity=0.272 Sum_probs=119.7
Q ss_pred CccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCC
Q 037488 152 PEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLT 231 (628)
Q Consensus 152 ~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~ 231 (628)
|..++.+++|++|+|++|.+. .+|..++.+++|++|++++|++.+.+|..+... ..+..|..++
T Consensus 120 p~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~ 183 (328)
T 4fcg_A 120 PDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST---------------DASGEHQGLV 183 (328)
T ss_dssp CSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE---------------C-CCCEEEST
T ss_pred hHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc---------------cchhhhccCC
Confidence 334444455555555555554 344445555555555555544444444433220 0011233466
Q ss_pred CCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCC
Q 037488 232 NLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEY 311 (628)
Q Consensus 232 ~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 311 (628)
+|++|++++|.++.+|..+..+++|++|++++|.+++ +|..+..+++|+.|++++|.+.+.+|..++.+++|++|++++
T Consensus 184 ~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~ 262 (328)
T 4fcg_A 184 NLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKD 262 (328)
T ss_dssp TCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTT
T ss_pred CCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCC
Confidence 6777777777766666666666677777777777664 334566677777777777777666777777777777777777
Q ss_pred CcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcce
Q 037488 312 NRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 312 n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
|.+.+.+|..+..+++|+.|++++|.+.+.+|..+..+++|+.+++..|.+.
T Consensus 263 n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 263 CSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 7776677777777777777777777777777777777777777777665443
No 76
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=5.9e-30 Score=273.03 Aligned_cols=224 Identities=21% Similarity=0.194 Sum_probs=172.2
Q ss_pred CchHHhcccc---ccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCcc
Q 037488 126 LPRAIGNLSQ---SMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDD 202 (628)
Q Consensus 126 ~p~~~~~l~~---~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~ 202 (628)
+|..+..+.. .++.|++++|.+.+..|..|..+++|+.|+|++|.+++..| +..+++|++|+|++|.+.+..+
T Consensus 22 l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-- 97 (487)
T 3oja_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-- 97 (487)
T ss_dssp HHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE--
T ss_pred hHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC--
Confidence 4555554432 68888888888888777888888888888888888876555 7888888888888888875432
Q ss_pred ccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCccc-CCccc
Q 037488 203 LCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIG-NLKVL 280 (628)
Q Consensus 203 ~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L 280 (628)
.++|+.|++++|.+++..+.. +++|+.|+|++|.++.+ |..+..+++|++|++++|.+++..|..+. .+++|
T Consensus 98 ---~~~L~~L~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L 171 (487)
T 3oja_A 98 ---GPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTL 171 (487)
T ss_dssp ---CTTCCEEECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTC
T ss_pred ---CCCcCEEECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcc
Confidence 278888888888888765543 46788888888888876 45667788888888888888877777665 68888
Q ss_pred cEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCC
Q 037488 281 IKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFN 360 (628)
Q Consensus 281 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 360 (628)
+.|+|++|.+++..+ ...+++|++|+|++|.+++.+| .+..+++|+.|++++|.+++ +|..+..+++|+.|++++|
T Consensus 172 ~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N 247 (487)
T 3oja_A 172 EHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGN 247 (487)
T ss_dssp CEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTC
T ss_pred cEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCC
Confidence 888888888876533 2357888888888888886444 47788888888888888886 4556777888888888888
Q ss_pred cce
Q 037488 361 KLE 363 (628)
Q Consensus 361 ~l~ 363 (628)
++.
T Consensus 248 ~l~ 250 (487)
T 3oja_A 248 GFH 250 (487)
T ss_dssp CBC
T ss_pred CCc
Confidence 877
No 77
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.9e-28 Score=246.62 Aligned_cols=207 Identities=25% Similarity=0.303 Sum_probs=178.7
Q ss_pred CCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEE
Q 037488 158 LTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLH 237 (628)
Q Consensus 158 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 237 (628)
.+.++.|+|++|.+. .+|..++.+++|++|+|++|.+. .+|..+.++++|++|+|++|.++ .+|..+..+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 467788888888887 56767777888888888888887 67777888888888888888887 5677788888888888
Q ss_pred ccCCcC-CcCCCCcc---------CCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEE
Q 037488 238 LGSNQI-TSIPSTLL---------NLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYL 307 (628)
Q Consensus 238 L~~n~l-~~lp~~~~---------~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 307 (628)
+++|.+ ..+|..+. .+++|++|++++|.++ .+|..++.+++|++|++++|.+++ +|..++.+++|++|
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L 234 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEEL 234 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEE
Confidence 887554 45776654 4999999999999999 678889999999999999999996 55578999999999
Q ss_pred eCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC
Q 037488 308 FLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE 369 (628)
Q Consensus 308 ~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 369 (628)
++++|.+.+.+|..++.+++|+.|++++|.+.+.+|..+..+++|+.|++++|++.+.+|..
T Consensus 235 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~ 296 (328)
T 4fcg_A 235 DLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSL 296 (328)
T ss_dssp ECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGG
T ss_pred ECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHH
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 78
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.96 E-value=1.6e-29 Score=255.83 Aligned_cols=206 Identities=29% Similarity=0.483 Sum_probs=154.5
Q ss_pred hhhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 417 LTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 417 ~~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
++..++...+++|...+.||+|+||.||+|+..+|+.||||++........+.+.+|+++++.++||||++++++|..++
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33444556788999999999999999999998889999999987665556778999999999999999999999875432
Q ss_pred cc----------------------------------------------------------------------cccccccc
Q 037488 497 FK----------------------------------------------------------------------ADFGMAKP 506 (628)
Q Consensus 497 ~~----------------------------------------------------------------------~DFGla~~ 506 (628)
.. +|||+++.
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~ 188 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKK 188 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEE
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccc
Confidence 11 39999986
Q ss_pred ccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC-ccHHHHHHhhcC-Ccccee
Q 037488 507 LLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE-MTLKHWVNDLLP-ISVMKV 584 (628)
Q Consensus 507 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~-~~~~~~~~~~~~-~~~~~~ 584 (628)
..............||+.|+|||++.++.++.++|||||||++|||+||+.||....+.. .....|...... ......
T Consensus 189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 189 GTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp CSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 543322223344569999999999999999999999999999999999999997654433 334444322211 122222
Q ss_pred ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+++.. ....+..++.++.+++.+||+.||++|||+.||
T Consensus 269 ~~~~~------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 306 (321)
T 2qkw_B 269 VDPNL------ADKIRPESLRKFGDTAVKCLALSSEDRPSMGDV 306 (321)
T ss_dssp SSSSC------TTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cChhh------ccccCHHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 22221 122345678889999999999999999998764
No 79
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=4.5e-27 Score=255.72 Aligned_cols=269 Identities=23% Similarity=0.277 Sum_probs=191.9
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCC
Q 037488 33 QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYL 112 (628)
Q Consensus 33 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 112 (628)
.++++|++++|.++ .+|..+. ++|+.|+|++|.++.+.+ .+++|+.|+|++|+|+.++. .+++|
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~---------~l~~L 103 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV---------LPPGL 103 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC---------CCTTC
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC---------CCCCC
Confidence 35888899999988 4565554 789999999999987644 57899999999999887643 56889
Q ss_pred cEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeeccc
Q 037488 113 KYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY 192 (628)
Q Consensus 113 ~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 192 (628)
++|++++|.++++.+ ....|+.|++++|.++. +|.. +++|+.|++++|++++ +|. .+.+|+.|++++
T Consensus 104 ~~L~Ls~N~l~~l~~-----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~ 170 (622)
T 3g06_A 104 LELSIFSNPLTHLPA-----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYN 170 (622)
T ss_dssp CEEEECSCCCCCCCC-----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEECcCCcCCCCCC-----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCC
Confidence 999999999886543 23467777787777775 3432 4777888888887774 343 245677788888
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCC
Q 037488 193 NQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPL 272 (628)
Q Consensus 193 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 272 (628)
|++++ +| ..+++|+.|++++|+++++ |.. +++|+.|++++|.++.+|.. +++|++|++++|.+++ +|
T Consensus 171 N~l~~-l~---~~~~~L~~L~Ls~N~l~~l-~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~-lp- 237 (622)
T 3g06_A 171 NQLTS-LP---MLPSGLQELSVSDNQLASL-PTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTS-LP- 237 (622)
T ss_dssp SCCSC-CC---CCCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSC-CC-
T ss_pred CCCCC-Cc---ccCCCCcEEECCCCCCCCC-CCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCc-CC-
Confidence 87774 44 3457777888888877753 332 36777788888887777753 3677778888877775 33
Q ss_pred cccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCC
Q 037488 273 EIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLL 350 (628)
Q Consensus 273 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 350 (628)
..+++|+.|++++|.++. +|. .+++|+.|+|++|+++ .+|..+..+++|+.|++++|.+++..|..+..+.
T Consensus 238 --~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 238 --VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp --CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred --CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 345677777788777774 333 4567777777777777 5677777777777777777777777666655443
No 80
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=8.6e-28 Score=238.67 Aligned_cols=209 Identities=28% Similarity=0.309 Sum_probs=139.7
Q ss_pred CCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCc-CcccCCCCccCCCCCcEEE
Q 037488 159 TNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNK-LSGFVPASFGNLTNLRSLH 237 (628)
Q Consensus 159 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~ 237 (628)
++|+.|++++|.+++..+..|..+++|++|++++|.+.+..|..|.++++|++|++++|. +....+..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 456666666666665555556666666666666666665556666666666666666665 5555556666666666666
Q ss_pred ccCCcCCcC-CCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcc
Q 037488 238 LGSNQITSI-PSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQG 316 (628)
Q Consensus 238 L~~n~l~~l-p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 316 (628)
+++|.++.+ |..+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..+..+++|++|++++|++++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 666666665 3345556666666666666666555566677777777777777766555566677777777777777776
Q ss_pred cCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 317 SIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 317 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
..|..+..+++|+.|++++|.++++.+..+..+++|+.|++++|++.+..+
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 242 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCR 242 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCC
Confidence 667777777777777777777776666667777777777777777765543
No 81
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.96 E-value=2.4e-29 Score=269.72 Aligned_cols=178 Identities=21% Similarity=0.239 Sum_probs=132.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHH---HHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNF---DIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~---~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ......+ .+++++++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 46899999999999999999987 679999999997532 1112223 3446778888999999999877654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+.+...
T Consensus 268 ylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-- 345 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-- 345 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred EEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC--
Confidence 499999876433
Q ss_pred ccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 513 SLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
...+.+||+.|||||++.+ ..|+.++||||+||++|||++|++||.+..... ........ ...
T Consensus 346 --~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i------------~~~ 409 (689)
T 3v5w_A 346 --KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMT------------LTM 409 (689)
T ss_dssp --CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHH------------HHC
T ss_pred --CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhh------------cCC
Confidence 2346799999999999975 579999999999999999999999997543222 11111110 000
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
....|...++++++|+.+||++||++|++.
T Consensus 410 ----~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~ 439 (689)
T 3v5w_A 410 ----AVELPDSFSPELRSLLEGLLQRDVNRRLGC 439 (689)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHTCSCGGGCTTC
T ss_pred ----CCCCCccCCHHHHHHHHHHccCCHhHCCCC
Confidence 112334567789999999999999999984
No 82
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.7e-30 Score=258.92 Aligned_cols=275 Identities=17% Similarity=0.173 Sum_probs=189.0
Q ss_pred CEEecCccCCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcc
Q 037488 23 NSLYLQNVQLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNF 102 (628)
Q Consensus 23 ~~L~l~~n~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~ 102 (628)
..+.+.++ .++.++++.+.+...++..+..+++|++|+|++|+++++.|+.|.++++|+.|+|++|.++..+
T Consensus 3 ~~l~~~g~---~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~----- 74 (317)
T 3o53_A 3 HEIKQNGN---RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL----- 74 (317)
T ss_dssp CEEEEETT---EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE-----
T ss_pred ccccCCcC---ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch-----
Confidence 34444443 3556778888887666667777888999999999998888888889999999999999887543
Q ss_pred cccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCC
Q 037488 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKL 182 (628)
Q Consensus 103 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l 182 (628)
.+..+++|++|++++|.++++. ..++|+.|++++|.+.+..+. .+
T Consensus 75 --~~~~l~~L~~L~Ls~n~l~~l~------------------------------~~~~L~~L~l~~n~l~~~~~~---~~ 119 (317)
T 3o53_A 75 --DLESLSTLRTLDLNNNYVQELL------------------------------VGPSIETLHAANNNISRVSCS---RG 119 (317)
T ss_dssp --EETTCTTCCEEECCSSEEEEEE------------------------------ECTTCCEEECCSSCCSEEEEC---CC
T ss_pred --hhhhcCCCCEEECcCCcccccc------------------------------CCCCcCEEECCCCccCCcCcc---cc
Confidence 2677888888888888776321 124566666666666544332 24
Q ss_pred CCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCc-cCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEc
Q 037488 183 QKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASF-GNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNL 261 (628)
Q Consensus 183 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l 261 (628)
++|++|++++|++.+..+..+..+++|++|++++|.+++..+..+ ..+++|++|++++|.++.+|... .+++|++|++
T Consensus 120 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~L 198 (317)
T 3o53_A 120 QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDL 198 (317)
T ss_dssp SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEEC
T ss_pred CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEEC
Confidence 556666666666665555566666666666666666666555544 35667777777777776664333 3667777777
Q ss_pred CCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCc-ccCChhhcCCCCCCEEECcC-Cccc
Q 037488 262 SSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ-GSIPDSIGDLINLKSLDLSN-NNLS 339 (628)
Q Consensus 262 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~l~~-N~l~ 339 (628)
++|.+++.++ .+..+++|+.|++++|+++ .+|..+..+++|+.|++++|++. +.+|..+..+++|+.|++++ +.++
T Consensus 199 s~N~l~~l~~-~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~ 276 (317)
T 3o53_A 199 SSNKLAFMGP-EFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLT 276 (317)
T ss_dssp CSSCCCEECG-GGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHH
T ss_pred CCCcCCcchh-hhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhcc
Confidence 7777765433 4677777777777777777 35666777788888888888887 66777788888888888773 4455
Q ss_pred ccCc
Q 037488 340 GIIP 343 (628)
Q Consensus 340 ~~~~ 343 (628)
+..+
T Consensus 277 ~~~~ 280 (317)
T 3o53_A 277 GQNE 280 (317)
T ss_dssp SSSS
T ss_pred CCch
Confidence 5443
No 83
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=1.9e-27 Score=236.20 Aligned_cols=232 Identities=23% Similarity=0.248 Sum_probs=180.9
Q ss_pred ccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCc-ccccCCccccCCCCCCEEEc
Q 037488 136 SMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQ-LEGSIPDDLCRLAALFQLDL 214 (628)
Q Consensus 136 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L 214 (628)
.++.|++++|.+.+..+..|..+++|+.|++++|.+++..|..+..+++|++|++++|+ +....|..+..+++|++|++
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34444445555554555667778888888888888887777788888888888888887 77666778888888899999
Q ss_pred cCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCC
Q 037488 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGV 293 (628)
Q Consensus 215 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 293 (628)
++|.+++..+..|..+++|++|++++|+++.+|.. +..+++|++|++++|.+++..+..|..+++|+.|++++|.+++.
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 192 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHV 192 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccccc
Confidence 88888887788888888999999999988887754 66788899999999988877777788899999999999999888
Q ss_pred CccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCC
Q 037488 294 IPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 294 ~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
.|..+..+++|+.|++++|.+++..+..+..+++|+.|++++|.+....+.. .-...++.+..+.+.+.+..|+
T Consensus 193 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 193 HPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESG
T ss_pred CHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCch
Confidence 8888889999999999999998777777899999999999999887533211 0011223333556667666664
No 84
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=3.1e-29 Score=252.84 Aligned_cols=236 Identities=22% Similarity=0.226 Sum_probs=142.3
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 32 LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 32 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
+++|++|+|++|.+++..|..|.++++|+.|+|++|+++++.+ |..+++|++|++++|.++.++ ..++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~----------~~~~ 100 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL----------VGPS 100 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE----------ECTT
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc----------CCCC
Confidence 3478999999999998888899999999999999999998765 999999999999999988643 3489
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCcccccccc-CCCCCCEeec
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALG-KLQKLQLLNL 190 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L 190 (628)
|++|++++|.++++.+..+ ..++.|++++|.+++..+..+..+++|+.|++++|.+.+..+..+. .+++|++|++
T Consensus 101 L~~L~l~~n~l~~~~~~~~----~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 101 IETLHAANNNISRVSCSRG----QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp CCEEECCSSCCSEEEECCC----SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred cCEEECCCCccCCcCcccc----CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 9999999999986544321 1345555555555544444455555555555555555444333332 3455555555
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCc-CC
Q 037488 191 EYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFT-GP 269 (628)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~-~~ 269 (628)
++|++++. + ....+++|++|++++|++++..+ .+..+++|+.|++++|+++.+|..+..+++|++|++++|.++ +.
T Consensus 177 ~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~ 253 (317)
T 3o53_A 177 QYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGT 253 (317)
T ss_dssp TTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHH
T ss_pred CCCcCccc-c-cccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcC
Confidence 55554433 1 12224444555555554443222 244444444444444444444444444444444444444444 33
Q ss_pred CCCcccCCccccEEEcC
Q 037488 270 LPLEIGNLKVLIKIDLS 286 (628)
Q Consensus 270 ~~~~~~~l~~L~~L~Ls 286 (628)
++..+..++.|+.++++
T Consensus 254 ~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 254 LRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp HHHHHHTCHHHHHHHHH
T ss_pred HHHHHhccccceEEECC
Confidence 33334444444444443
No 85
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.95 E-value=7.9e-29 Score=247.54 Aligned_cols=183 Identities=22% Similarity=0.261 Sum_probs=140.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|+.++++++|||||++++++..++..
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 46899999999999999999986 67999999999866555567789999999999999999999987543311
Q ss_pred -----------------------------------------------------------ccccccccccccCcccccccc
Q 037488 499 -----------------------------------------------------------ADFGMAKPLLKEDQSLIQTQT 519 (628)
Q Consensus 499 -----------------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 519 (628)
+|||+|+....... .....
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 176 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTM 176 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC--CBCCC
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc--ccCCc
Confidence 49999986543322 23456
Q ss_pred cccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhc
Q 037488 520 LATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599 (628)
Q Consensus 520 ~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (628)
+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... ......... ......
T Consensus 177 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~-----------------~~~~~~ 238 (297)
T 3fxz_A 177 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNG-----------------TPELQN 238 (297)
T ss_dssp CSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHC-----------------SCCCSC
T ss_pred cCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC-----------------CCCCCC
Confidence 79999999999999999999999999999999999999996532111 000000000 001122
Q ss_pred hhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 600 KGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 600 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..++.++.+++.+||+.||++|||+.|+
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~el 267 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKEL 267 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 33456779999999999999999998763
No 86
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.5e-29 Score=251.87 Aligned_cols=248 Identities=20% Similarity=0.246 Sum_probs=193.1
Q ss_pred ccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCccc-ccCCcccc-------CCCCCCEEEccCCcCCccccc
Q 037488 106 LSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNIS-GGIPEEIS-------NLTNLIAIYLGGNKLNGSIPI 177 (628)
Q Consensus 106 ~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~-~~~~~~~~-------~l~~L~~L~L~~n~l~~~~p~ 177 (628)
+.+.++|+.|++++|.+ .+|..+.. .++.|++++|.+. ..+|..+. ++++|++|++++|++++..|.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 113 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPP 113 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHH
Confidence 34456677777777777 45555543 2677777777773 34555554 688899999999999888887
Q ss_pred cc--cCCCCCCEeecccCcccccCCccccCC-----CCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCc---CC
Q 037488 178 AL--GKLQKLQLLNLEYNQLEGSIPDDLCRL-----AALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITS---IP 247 (628)
Q Consensus 178 ~~--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---lp 247 (628)
.+ ..+++|++|+|++|++.+. |..+..+ ++|++|++++|++.+..|..|+.+++|++|++++|++.+ +|
T Consensus 114 ~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 114 PLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp CSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred HHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 76 8889999999999998876 7777666 889999999999988888889999999999999998764 34
Q ss_pred CCc--cCCCCCcEEEcCCCCCcCC---CCCcccCCccccEEEcCCCcCCCCCc-cccCCCCCCCEEeCCCCcCcccCChh
Q 037488 248 STL--LNLKDILYLNLSSNFFTGP---LPLEIGNLKVLIKIDLSMNNFSGVIP-ITIGYLKDLQYLFLEYNRLQGSIPDS 321 (628)
Q Consensus 248 ~~~--~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~~~ 321 (628)
..+ ..+++|++|++++|.+++. ....+..+++|+.|++++|++++..| ..+..+++|++|++++|+++ .+|..
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~ 271 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKG 271 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSS
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhh
Confidence 444 6788999999999988732 22334577889999999999987765 45566889999999999998 66766
Q ss_pred hcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCccee
Q 037488 322 IGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 322 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
+. ++|+.|++++|++++. |. +..+++|+.|++++|++++
T Consensus 272 ~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 272 LP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred cc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 65 7899999999999877 54 8888999999999998864
No 87
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=1.1e-28 Score=248.39 Aligned_cols=249 Identities=21% Similarity=0.178 Sum_probs=160.1
Q ss_pred CCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccc-cCccccC-------CCCCCCEEEccCccccCCCCCCcc
Q 037488 31 QLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYG-FIPNTFG-------NLRNLNRLGLNDNYLTSSTPKLNF 102 (628)
Q Consensus 31 ~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~~~~f~-------~l~~L~~L~L~~N~l~~~~~~~~~ 102 (628)
..++|++|++++|.+ .+|..+... |+.|+|++|++.. ..|..+. ++++|++|+|++|.++...+..-
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~- 115 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPL- 115 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCS-
T ss_pred cCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHH-
Confidence 356789999999999 566655544 8899999999953 3455454 78999999999999986433210
Q ss_pred cccccCCCCCcEEEcccCCCCCCCchHHhccc----cccceeeccCCcccccCCccccCCCCCCEEEccCCcCCcc--cc
Q 037488 103 LSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS----QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGS--IP 176 (628)
Q Consensus 103 ~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~----~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~--~p 176 (628)
.+..+++|++|++++|.+++. |..+..+. ..|+.|++++|.+.+..|..|+.+++|+.|++++|++.+. .+
T Consensus 116 --~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 116 --LEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp --SSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHH
T ss_pred --HHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHH
Confidence 127889999999999999987 77777663 3566666666666666666666666666666666665543 22
Q ss_pred ccc--cCCCCCCEeecccCcccc---cCCccccCCCCCCEEEccCCcCcccCC-CCccCCCCCcEEEccCCcCCcCCCCc
Q 037488 177 IAL--GKLQKLQLLNLEYNQLEG---SIPDDLCRLAALFQLDLGSNKLSGFVP-ASFGNLTNLRSLHLGSNQITSIPSTL 250 (628)
Q Consensus 177 ~~~--~~l~~L~~L~L~~n~l~~---~~p~~~~~l~~L~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~lp~~~ 250 (628)
..+ ..+++|++|++++|++.+ .....+..+++|++|++++|++++..| ..+..+++|++|+|++|+++.+|..+
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~ 272 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGL 272 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSC
T ss_pred HHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhc
Confidence 233 566666666666666652 111223455666666666666665443 34445566666666666666665554
Q ss_pred cCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCC
Q 037488 251 LNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFS 291 (628)
Q Consensus 251 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 291 (628)
. ++|++|++++|++++. |. +..+++|++|++++|.++
T Consensus 273 ~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 273 P--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp C--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred c--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 4 5555555555555544 33 555555555555555554
No 88
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.95 E-value=1.7e-28 Score=248.57 Aligned_cols=179 Identities=21% Similarity=0.271 Sum_probs=138.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+++++.++|||||++++++..+...
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999999997 679999999997532 22245788999999999999999999988664321
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...... ..
T Consensus 88 ~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~---~~ 164 (336)
T 3h4j_B 88 IEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN---FL 164 (336)
T ss_dssp ECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB---TT
T ss_pred EECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc---cc
Confidence 4999998654332 22
Q ss_pred ccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
...+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+..... ....... .
T Consensus 165 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~-----------------~~~~i~~----~ 223 (336)
T 3h4j_B 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN-----------------LFKKVNS----C 223 (336)
T ss_dssp CCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT-----------------CBCCCCS----S
T ss_pred ccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH-----------------HHHHHHc----C
Confidence 45689999999999998886 789999999999999999999997532211 1111110 1
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+...++++.+++.+||+.||++|||+.|+
T Consensus 224 ~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~ei 256 (336)
T 3h4j_B 224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEI 256 (336)
T ss_dssp CCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CCCCcccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 122334456779999999999999999998763
No 89
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.95 E-value=5.9e-29 Score=251.53 Aligned_cols=180 Identities=23% Similarity=0.279 Sum_probs=138.9
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++||||+++++++..++..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 92 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLI 92 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 457899999999999999999987 68999999999754 334566788999999999999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 93 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~ 169 (328)
T 3fe3_A 93 MEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG---K 169 (328)
T ss_dssp ECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC---G
T ss_pred EECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC---c
Confidence 4999998654332 2
Q ss_pred cccccccccccCccccccCccC-cccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 516 QTQTLATIGYMAPEYGREGRVS-TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~-~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
....+||++|+|||++.+..++ .++||||+||++|||++|+.||.+.. ........ ..+.
T Consensus 170 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i------------~~~~-- 230 (328)
T 3fe3_A 170 LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERV------------LRGK-- 230 (328)
T ss_dssp GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH------------HHCC--
T ss_pred cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHH------------HhCC--
Confidence 3556899999999999988875 79999999999999999999997532 11111111 0011
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...|..++.++.+++.+||+.||++|||+.|+
T Consensus 231 --~~~p~~~s~~~~~li~~~L~~dP~~R~t~~ei 262 (328)
T 3fe3_A 231 --YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQI 262 (328)
T ss_dssp --CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred --CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 11223356679999999999999999998763
No 90
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=5.1e-26 Score=247.44 Aligned_cols=263 Identities=24% Similarity=0.277 Sum_probs=220.1
Q ss_pred CCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccc
Q 037488 57 SKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQS 136 (628)
Q Consensus 57 ~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~ 136 (628)
.+++.|++++|.++.+ |..+. ++|+.|+|++|.|+.++. .+++|++|+|++|+++++.+ .+ ..
T Consensus 40 ~~l~~L~ls~n~L~~l-p~~l~--~~L~~L~L~~N~l~~lp~---------~l~~L~~L~Ls~N~l~~lp~----~l-~~ 102 (622)
T 3g06_A 40 NGNAVLNVGESGLTTL-PDCLP--AHITTLVIPDNNLTSLPA---------LPPELRTLEVSGNQLTSLPV----LP-PG 102 (622)
T ss_dssp HCCCEEECCSSCCSCC-CSCCC--TTCSEEEECSCCCSCCCC---------CCTTCCEEEECSCCCSCCCC----CC-TT
T ss_pred CCCcEEEecCCCcCcc-ChhhC--CCCcEEEecCCCCCCCCC---------cCCCCCEEEcCCCcCCcCCC----CC-CC
Confidence 4689999999999965 55554 899999999999997653 46899999999999986544 23 47
Q ss_pred cceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccC
Q 037488 137 MEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGS 216 (628)
Q Consensus 137 l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 216 (628)
|+.|++++|.+++. |. .+++|+.|++++|++++ +|.. +++|++|++++|++.+ +|. .+.+|+.|++++
T Consensus 103 L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~ 170 (622)
T 3g06_A 103 LLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPA---LPSELCKLWAYN 170 (622)
T ss_dssp CCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCC---ccCCCCEEECCC
Confidence 99999999999874 33 57899999999999985 5543 4899999999999985 443 357899999999
Q ss_pred CcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCcc
Q 037488 217 NKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPI 296 (628)
Q Consensus 217 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 296 (628)
|.++++ | ..+++|+.|++++|.++.+|.. +++|+.|++++|.++.. |. .+++|+.|++++|.+++ +|
T Consensus 171 N~l~~l-~---~~~~~L~~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l-~~---~~~~L~~L~Ls~N~L~~-lp- 237 (622)
T 3g06_A 171 NQLTSL-P---MLPSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSL-PA---LPSGLKELIVSGNRLTS-LP- 237 (622)
T ss_dssp SCCSCC-C---CCCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSSC-CC---CCTTCCEEECCSSCCSC-CC-
T ss_pred CCCCCC-c---ccCCCCcEEECCCCCCCCCCCc---cchhhEEECcCCccccc-CC---CCCCCCEEEccCCccCc-CC-
Confidence 999864 4 4568999999999999999864 47899999999999854 43 34789999999999986 45
Q ss_pred ccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCC
Q 037488 297 TIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 297 ~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
..+++|+.|++++|+++ .+|. .+++|+.|++++|.|+ .+|..+..+++|+.|++++|++++.+|.
T Consensus 238 --~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 238 --VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp --CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred --CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 45689999999999998 4555 6789999999999999 5577899999999999999999977653
No 91
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.95 E-value=1.7e-28 Score=251.08 Aligned_cols=183 Identities=17% Similarity=0.201 Sum_probs=139.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchh------HHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYRE------AFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||+++..... ..+.+.+|+.++++++|||||++++++.++...
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 46789999999999999999987 57999999999754321 246789999999999999999999987653311
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+|+...
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 3999998654
Q ss_pred ccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
... .....+||+.|+|||++.+..|+.++||||+||++|||++|++||.+... ...... .
T Consensus 171 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~-----~~~~~~------------i 230 (361)
T 2yab_A 171 DGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLAN------------I 230 (361)
T ss_dssp TTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHH------------H
T ss_pred CCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------------H
Confidence 332 22456799999999999999999999999999999999999999965321 111111 1
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...........+..++.++++++.+||..||++|||+.|+
T Consensus 231 ~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 231 TAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 1111112223344567789999999999999999998753
No 92
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.95 E-value=2.8e-28 Score=247.30 Aligned_cols=209 Identities=33% Similarity=0.529 Sum_probs=156.3
Q ss_pred cccchhhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccch-hHHHHHHHHHHHhhcccCCCcceeeee
Q 037488 413 GIRRLTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYR-EAFKNFDIECDMMKHIRHRNLIKIISS 491 (628)
Q Consensus 413 ~~~~~~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~ 491 (628)
....++..++....++|...+.||+|+||.||+|+..+|+.||||++..... .....+.+|++++++++||||++++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 3456788899999999999999999999999999988899999999975432 223368899999999999999999998
Q ss_pred ccCCCcc-------------------------------------------------------------------------
Q 037488 492 CSNDDFK------------------------------------------------------------------------- 498 (628)
Q Consensus 492 ~~~~~~~------------------------------------------------------------------------- 498 (628)
|..++..
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 7543211
Q ss_pred ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcc---cCCCccHHHHHHh
Q 037488 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI---FSGEMTLKHWVND 575 (628)
Q Consensus 499 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~---~~~~~~~~~~~~~ 575 (628)
+|||+|+...... ........||++|+|||++.+..++.++||||+||++|||+||+.||+.. .........|+..
T Consensus 176 ~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 254 (326)
T 3uim_A 176 GDFGLAKLMDYKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKG 254 (326)
T ss_dssp CCCSSCEECCSSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTT
T ss_pred ccCccccccCccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHH
Confidence 3999998654332 22234456999999999999999999999999999999999999999632 1233445555544
Q ss_pred hcCC-ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 576 LLPI-SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 576 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... ......+.... ...+..++.++.+++.+||+.||++|||+.||
T Consensus 255 ~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 302 (326)
T 3uim_A 255 LLKEKKLEALVDVDLQ------GNYKDEEVEQLIQVALLCTQSSPMERPKMSEV 302 (326)
T ss_dssp TTSSCCSTTSSCTTCT------TSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred HhhchhhhhhcChhhc------cccCHHHHHHHHHHHHHHhCcCCccCCCHHHH
Confidence 3332 12222222221 22344567889999999999999999998764
No 93
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.95 E-value=2.1e-28 Score=251.26 Aligned_cols=182 Identities=18% Similarity=0.288 Sum_probs=138.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++.+++..
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~ 107 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 107 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46799999999999999999987 57999999999754 234456789999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 108 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~-- 185 (362)
T 2bdw_A 108 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 185 (362)
T ss_dssp CCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC--
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc--
Confidence 3999998654322
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
.....+||++|+|||++.+..|+.++||||+||++|||++|++||.+... ........ ....
T Consensus 186 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~--~~~~~~i~---------------~~~~ 247 (362)
T 2bdw_A 186 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ--HRLYAQIK---------------AGAY 247 (362)
T ss_dssp -SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH---------------HTCC
T ss_pred -ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHH---------------hCCC
Confidence 22456799999999999999999999999999999999999999965321 11111111 1111
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
......+..++.++.+++.+||+.||++|||+.|
T Consensus 248 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 281 (362)
T 2bdw_A 248 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ 281 (362)
T ss_dssp CCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCcccccCCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 1112223456778999999999999999999865
No 94
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.95 E-value=3.1e-28 Score=246.03 Aligned_cols=194 Identities=23% Similarity=0.264 Sum_probs=142.5
Q ss_pred cchhhHHHHHhhcC----------CCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCC
Q 037488 415 RRLTYLELFQATNG----------FSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHR 483 (628)
Q Consensus 415 ~~~~~~~l~~~~~~----------~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 483 (628)
..+++.++..+++. |...+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34555665555543 66677899999999999997 47999999999866555567789999999999999
Q ss_pred CcceeeeeccCCCcc-----------------------------------------------------------------
Q 037488 484 NLIKIISSCSNDDFK----------------------------------------------------------------- 498 (628)
Q Consensus 484 niv~l~~~~~~~~~~----------------------------------------------------------------- 498 (628)
||++++++|..++..
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl 182 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKL 182 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEE
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEE
Confidence 999999987543211
Q ss_pred ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcC
Q 037488 499 ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLP 578 (628)
Q Consensus 499 ~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~ 578 (628)
+|||+++....... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 183 ~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~- 257 (321)
T 2c30_A 183 SDFGFCAQISKDVP--KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPV--QAMKRLRDSP- 257 (321)
T ss_dssp CCCTTCEECCSSSC--CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSS-
T ss_pred eeeeeeeecccCcc--ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhcCC-
Confidence 49999986543321 224567999999999999999999999999999999999999999653211 1111111000
Q ss_pred CccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 579 ISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 258 -------~--------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 292 (321)
T 2c30_A 258 -------P--------PKLKNSHKVSPVLRDFLERMLVRDPQERATAQEL 292 (321)
T ss_dssp -------C--------CCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred -------C--------CCcCccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 0011122346679999999999999999998763
No 95
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.94 E-value=3.3e-28 Score=255.60 Aligned_cols=185 Identities=19% Similarity=0.216 Sum_probs=138.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
..++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|+++++.++|||||++++++.+++..
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356789999999999999999986 679999999997543 34456789999999999999999999987654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+......
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~- 167 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ- 167 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC-
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC-
Confidence 4999998664332
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
......+||++|+|||++.+..|+.++||||+||++|||++|++||.+... ....... ..+.
T Consensus 168 -~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~--~~~~~~i---------------~~~~ 229 (444)
T 3soa_A 168 -QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ--HRLYQQI---------------KAGA 229 (444)
T ss_dssp -CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHH---------------HHTC
T ss_pred -ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH--HHHHHHH---------------HhCC
Confidence 222456899999999999999999999999999999999999999965321 1111111 1111
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..+++++++++.+||+.||++|||+.|+
T Consensus 230 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~ 265 (444)
T 3soa_A 230 YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEA 265 (444)
T ss_dssp CCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 111122233557789999999999999999998753
No 96
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=1.5e-28 Score=249.85 Aligned_cols=182 Identities=18% Similarity=0.256 Sum_probs=129.4
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 87 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVL 87 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEE
Confidence 357899999999999999999986 679999999997543 23345688999999999999999999987654321
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+....... ...
T Consensus 88 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-~~~ 166 (347)
T 3zgw_A 88 EYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD-YHL 166 (347)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC----------
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC-ccc
Confidence 49999986543221 223
Q ss_pred ccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.+.+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+.. ........ ..+.
T Consensus 167 ~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i------------~~~~--- 226 (347)
T 3zgw_A 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-----VMALYKKI------------MRGK--- 226 (347)
T ss_dssp -----CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHH------------HHTC---
T ss_pred cccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHH------------HcCC---
Confidence 45679999999999998876 899999999999999999999997521 11111111 0011
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+...+.++.+++.+||+.||++|||+.|+
T Consensus 227 -~~~p~~~s~~~~~li~~~L~~dP~~Rps~~ei 258 (347)
T 3zgw_A 227 -YDVPKWLSPSSILLLQQMLQVDPKKRISMKNL 258 (347)
T ss_dssp -CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -CCCCCCCCHHHHHHHHHHcccCHhHCcCHHHH
Confidence 11223356678999999999999999998763
No 97
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.94 E-value=4.6e-28 Score=244.89 Aligned_cols=185 Identities=22% Similarity=0.295 Sum_probs=138.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch-hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR-EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|+.+++.++|||||++++++..++..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46899999999999999999987 5799999999975432 3346688999999999999999999987654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+............
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~ 165 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccC
Confidence 3999998664433333334
Q ss_pred cccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
..+||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+.... ..
T Consensus 166 ~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~------------------~~ 227 (323)
T 3tki_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK------------------TY 227 (323)
T ss_dssp SCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTC------------------TT
T ss_pred CCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhccc------------------cc
Confidence 5689999999999988776 7899999999999999999999976433322222222110 00
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ei 259 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDI 259 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11123456678999999999999999998753
No 98
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.94 E-value=4.4e-28 Score=250.34 Aligned_cols=183 Identities=16% Similarity=0.173 Sum_probs=139.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.+.|...+.||+|+||.||+|.. .+|+.||+|++..........+.+|++++++++|||||++++++.++...
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46789999999999999999987 57999999999866555566789999999999999999999987543211
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~---~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE---I 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS---C
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc---c
Confidence 4999998764332 1
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.+... ......+.. .....
T Consensus 207 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~i~~---------------~~~~~ 269 (387)
T 1kob_A 207 VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD--LETLQNVKR---------------CDWEF 269 (387)
T ss_dssp EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHH---------------CCCCC
T ss_pred eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH--HHHHHHHHh---------------CCCCC
Confidence 2345799999999999999999999999999999999999999975321 111111100 00011
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 270 ~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~el 302 (387)
T 1kob_A 270 DEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDA 302 (387)
T ss_dssp CSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred CccccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 111223456779999999999999999998753
No 99
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.1e-27 Score=255.58 Aligned_cols=235 Identities=22% Similarity=0.247 Sum_probs=148.9
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCC
Q 037488 33 QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYL 112 (628)
Q Consensus 33 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 112 (628)
++|++|+|++|.+++..|..|.++++|++|+|++|.++++.| |+.+++|+.|+|++|.|+.++ ..++|
T Consensus 34 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~----------~~~~L 101 (487)
T 3oja_A 34 WNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL----------VGPSI 101 (487)
T ss_dssp GGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE----------ECTTC
T ss_pred CCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC----------CCCCc
Confidence 356666666666666666666666777777777776666544 666666777777766665432 12566
Q ss_pred cEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeeccc
Q 037488 113 KYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY 192 (628)
Q Consensus 113 ~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 192 (628)
++|++++|.++++.+. .+++|+.|+|++|.+++..|..++.+++|++|+|++
T Consensus 102 ~~L~L~~N~l~~~~~~----------------------------~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~ 153 (487)
T 3oja_A 102 ETLHAANNNISRVSCS----------------------------RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKL 153 (487)
T ss_dssp CEEECCSSCCCCEEEC----------------------------CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTT
T ss_pred CEEECcCCcCCCCCcc----------------------------ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCC
Confidence 6666666666543322 234566666666666666666666666666666666
Q ss_pred CcccccCCcccc-CCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCC
Q 037488 193 NQLEGSIPDDLC-RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLP 271 (628)
Q Consensus 193 n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 271 (628)
|.+.+..|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.++++|+.+..+++|+.|++++|.+++ +|
T Consensus 154 N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~-lp 230 (487)
T 3oja_A 154 NEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVL-IE 230 (487)
T ss_dssp SCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCE-EC
T ss_pred CCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcc-cc
Confidence 666665555554 56666666666666665422 234666777777777777666666666677777777777664 45
Q ss_pred CcccCCccccEEEcCCCcCC-CCCccccCCCCCCCEEeCC
Q 037488 272 LEIGNLKVLIKIDLSMNNFS-GVIPITIGYLKDLQYLFLE 310 (628)
Q Consensus 272 ~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l~ 310 (628)
..+..+++|+.|++++|.+. +.+|..+..++.|+.++++
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred hhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 55666677777777777766 4455566666666666664
No 100
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.94 E-value=9.2e-28 Score=241.47 Aligned_cols=200 Identities=21% Similarity=0.235 Sum_probs=138.6
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||+||+|+..+|+.||||++.... ....+.+.+|++++++++|||||++++++..++..
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 46788999999999999999999889999999996532 22346788999999999999999999988654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+...... ....
T Consensus 100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~ 177 (311)
T 3niz_A 100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV--RSYT 177 (311)
T ss_dssp CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC--C---
T ss_pred CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc--cccc
Confidence 4999998653322 1224
Q ss_pred cccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC---ccceeecc-----c
Q 037488 518 QTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI---SVMKVVDA-----H 588 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~ 588 (628)
..+||++|+|||++.+ ..|+.++||||+||++|||++|+.||......+ ............ .+....+. .
T Consensus 178 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 256 (311)
T 3niz_A 178 HEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPLWKQR 256 (311)
T ss_dssp CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHHHHSC
T ss_pred CCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccchhhhc
Confidence 4579999999999876 568999999999999999999999997644332 222222211111 11000000 0
Q ss_pred ccCC--cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQ--EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... ..........++.++.+++.+||+.||++|||+.|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 298 (311)
T 3niz_A 257 TFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDA 298 (311)
T ss_dssp CCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred ccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 0000 000111223456789999999999999999998763
No 101
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.94 E-value=3.7e-28 Score=245.24 Aligned_cols=182 Identities=17% Similarity=0.176 Sum_probs=138.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||+|.+.... .....+.+|+++++.++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46889999999999999999987 578999999997543 3345688999999999999999999987543211
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+++...... .
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~---~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD---N 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC---E
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC---c
Confidence 3999998764332 1
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ...... ........
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~------------i~~~~~~~ 222 (321)
T 1tki_A 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN-----QQIIEN------------IMNAEYTF 222 (321)
T ss_dssp EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHH------------HHHTCCCC
T ss_pred cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHH------------HHcCCCCC
Confidence 2345799999999999998899999999999999999999999965321 111111 01111111
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 223 ~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~ 255 (321)
T 1tki_A 223 DEEAFKEISIEAMDFVDRLLVKERKSRMTASEA 255 (321)
T ss_dssp CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 122334567789999999999999999998763
No 102
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.94 E-value=3.6e-28 Score=244.62 Aligned_cols=185 Identities=22% Similarity=0.326 Sum_probs=138.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.++|...+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.+++..
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46788899999999999999987 57999999998766666778899999999999999999999987643211
Q ss_pred -------------------------------------------------------------ccccccccccccCccc---
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSL--- 514 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~--- 514 (628)
+|||+|+.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 168 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccc
Confidence 4999998654322110
Q ss_pred ---------ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceee
Q 037488 515 ---------IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVV 585 (628)
Q Consensus 515 ---------~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (628)
.....+||+.|+|||++.+..++.++|||||||++|||++|..|+....+....... ..
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~------------~~ 236 (310)
T 3s95_A 169 RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL------------NV 236 (310)
T ss_dssp -----------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB------------CH
T ss_pred ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh------------hh
Confidence 111457999999999999999999999999999999999999998754332211000 00
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
... .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 237 ~~~------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 273 (310)
T 3s95_A 237 RGF------LDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273 (310)
T ss_dssp HHH------HHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hcc------ccccCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 000 0011223455669999999999999999998763
No 103
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.94 E-value=3.4e-28 Score=248.83 Aligned_cols=183 Identities=18% Similarity=0.247 Sum_probs=137.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch-----hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR-----EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
.+.|...+.||+|+||.||+|.. .+|+.||||+++.... ...+.+.+|+++++.++|||||++++++..++..
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45789999999999999999987 6799999999975321 1356789999999999999999999876543211
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 037488 499 ------------------------------------------------------------------------ADFGMAKP 506 (628)
Q Consensus 499 ------------------------------------------------------------------------~DFGla~~ 506 (628)
+|||+|+.
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~ 182 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQ 182 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEE
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeE
Confidence 39999986
Q ss_pred ccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeec
Q 037488 507 LLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVD 586 (628)
Q Consensus 507 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (628)
..... ......+||++|+|||++.+..|+.++||||+||++|||++|+.||.... ........
T Consensus 183 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~------------- 245 (351)
T 3c0i_A 183 LGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGII------------- 245 (351)
T ss_dssp CCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHH-------------
T ss_pred ecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHH-------------
Confidence 64332 12345679999999999999999999999999999999999999996521 11111111
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..........+..++.++.+++.+||+.||++|||+.|+
T Consensus 246 ---~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~ 284 (351)
T 3c0i_A 246 ---KGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEA 284 (351)
T ss_dssp ---HTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ---cCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 111111122233456789999999999999999998653
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.94 E-value=7e-28 Score=248.21 Aligned_cols=179 Identities=20% Similarity=0.209 Sum_probs=131.1
Q ss_pred CcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----------
Q 037488 430 SENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---------- 498 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---------- 498 (628)
...+.||+|+||.||+|.. .+|+.||||+++.......+.+.+|++++++++|||||+++++|..++..
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3356899999999999987 67999999999876655667899999999999999999999987654321
Q ss_pred -----------------------------------------------------------ccccccccccccCcccccccc
Q 037488 499 -----------------------------------------------------------ADFGMAKPLLKEDQSLIQTQT 519 (628)
Q Consensus 499 -----------------------------------------------------------~DFGla~~~~~~~~~~~~~~~ 519 (628)
+|||+|+...... .....
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~~~~~ 248 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---KLKVN 248 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---BCCCC
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---ccccc
Confidence 4999998764332 12345
Q ss_pred cccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhc
Q 037488 520 LATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVI 599 (628)
Q Consensus 520 ~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (628)
+||++|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+... ........
T Consensus 249 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~i~~~----------------~~~~~~~~ 311 (373)
T 2x4f_A 249 FGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDA-ETLNNILAC----------------RWDLEDEE 311 (373)
T ss_dssp CSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHT----------------CCCSCSGG
T ss_pred cCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhc----------------cCCCChhh
Confidence 7999999999999999999999999999999999999999653211 111111111 00111112
Q ss_pred hhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 600 KGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 600 ~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+..++.++.+++.+||+.||++|||+.|+
T Consensus 312 ~~~~~~~~~~li~~~L~~dp~~Rps~~e~ 340 (373)
T 2x4f_A 312 FQDISEEAKEFISKLLIKEKSWRISASEA 340 (373)
T ss_dssp GTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred hccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 23456779999999999999999998763
No 105
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.94 E-value=5.5e-28 Score=244.78 Aligned_cols=183 Identities=17% Similarity=0.227 Sum_probs=137.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch------hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR------EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++|||||++++++..+...
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 35688899999999999999987 5799999999975432 1356789999999999999999999987653311
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+|+...
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 3999998654
Q ss_pred ccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .......
T Consensus 170 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~~-------------- 231 (326)
T 2y0a_A 170 FGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE-TLANVSA-------------- 231 (326)
T ss_dssp TTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHH-HHHHHHH--------------
T ss_pred CCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHh--------------
Confidence 322 1244679999999999999999999999999999999999999996532110 1111100
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.........+..++.++.+++.+||+.||++|||+.|+
T Consensus 232 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 269 (326)
T 2y0a_A 232 --VNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDS 269 (326)
T ss_dssp --TCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred --cCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 01111122233456779999999999999999998763
No 106
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.94 E-value=4.9e-28 Score=247.15 Aligned_cols=185 Identities=19% Similarity=0.341 Sum_probs=132.0
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccC--CCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRH--RNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~--- 498 (628)
.+.|...+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++| |||+++++++..+...
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 4568899999999999999999888999999999754 33445778999999999976 9999999987654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+............
T Consensus 88 ~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~ 167 (343)
T 3dbq_A 88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKD 167 (343)
T ss_dssp ECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC----------
T ss_pred EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCC
Confidence 4999998765443322334
Q ss_pred cccccccccCcccccc-----------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeec
Q 037488 518 QTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVD 586 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (628)
..+||++|+|||++.+ ..|+.++|||||||++|||++|+.||.............. +
T Consensus 168 ~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~------------~ 235 (343)
T 3dbq_A 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII------------D 235 (343)
T ss_dssp --CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH------------C
T ss_pred CCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHh------------c
Confidence 5679999999999865 6789999999999999999999999975322111111110 1
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+.. ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 236 ~~~------~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~ 271 (343)
T 3dbq_A 236 PNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 271 (343)
T ss_dssp TTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCc------ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 100 111222334568999999999999999998763
No 107
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.94 E-value=5.4e-28 Score=244.54 Aligned_cols=193 Identities=20% Similarity=0.243 Sum_probs=136.8
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF------- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------- 497 (628)
..++|...+.||+|+||.||+|+.. ++.||||++..... ....+.+|+.++++++|||||++++++..+..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred chhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 4567889999999999999999876 88999999975433 33456679999999999999999988654221
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 037488 498 ------------------------------------------------------------------------KADFGMAK 505 (628)
Q Consensus 498 ------------------------------------------------------------------------~~DFGla~ 505 (628)
.+|||+|+
T Consensus 100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 03999998
Q ss_pred cccccCcccccccccccccccCcccccc-----CccCcccchhhHhHHHHHHhhCCCCCCcccCCCcc-H----------
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT-L---------- 569 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~-~---------- 569 (628)
..............+||+.|+|||++.+ ..++.++|||||||++|||+||+.||......... .
T Consensus 180 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 259 (322)
T 3soc_A 180 KFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSL 259 (322)
T ss_dssp EECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCH
T ss_pred ccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCch
Confidence 7644433323344679999999999987 45788999999999999999999999764332211 1
Q ss_pred HHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 570 KHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 570 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+........ ..... ........++.++.+++.+||+.||++|||+.||
T Consensus 260 ~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 309 (322)
T 3soc_A 260 EDMQEVVVHKK--------KRPVL-RDYWQKHAGMAMLCETIEECWDHDAEARLSAGCV 309 (322)
T ss_dssp HHHHHHHTTSC--------CCCCC-CGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhhhhhhhccc--------CCCCc-cccccccchHHHHHHHHHHHccCChhhCcCHHHH
Confidence 11111111000 00000 0011123456779999999999999999998764
No 108
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.94 E-value=6.3e-28 Score=250.23 Aligned_cols=184 Identities=19% Similarity=0.339 Sum_probs=132.4
Q ss_pred cCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhccc--CCCcceeeeeccCCCcc----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIR--HRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~---- 498 (628)
..|...+.||+|+||.||+|....++.||||++... .....+.+.+|++++++++ |||||++++++..++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458899999999999999999877999999999754 3345677899999999996 59999999987654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+.............
T Consensus 136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~ 215 (390)
T 2zmd_A 136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 215 (390)
T ss_dssp ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CC
T ss_pred ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCC
Confidence 49999987644332223345
Q ss_pred ccccccccCcccccc-----------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 519 TLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
.+||++|||||++.+ ..|+.++|||||||++|||++|+.||.........+... +++
T Consensus 216 ~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~------------~~~ 283 (390)
T 2zmd_A 216 QVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAI------------IDP 283 (390)
T ss_dssp SCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHH------------HCT
T ss_pred CCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHH------------hCc
Confidence 689999999999865 468999999999999999999999997532211111111 111
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. ....+...+.++.+++.+||+.||++|||+.|+
T Consensus 284 ~~------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 318 (390)
T 2zmd_A 284 NH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 318 (390)
T ss_dssp TS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cc------cCCCCccchHHHHHHHHHHcccChhhCCCHHHH
Confidence 00 011122235568999999999999999998763
No 109
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.94 E-value=1.7e-27 Score=252.20 Aligned_cols=200 Identities=20% Similarity=0.170 Sum_probs=134.7
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 497 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+++++.++|||||++++++.....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 357899999999999999999986 67999999999753 34456778999999999999999999998754321
Q ss_pred ---c--------------------------------------------------------------ccccccccccccCc
Q 037488 498 ---K--------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 498 ---~--------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
. +|||+|+.....
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-- 217 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS-- 217 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C--
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC--
Confidence 0 499999865432
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC--cc-c-------
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI--SV-M------- 582 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~--~~-~------- 582 (628)
......+||++|+|||++.+..|+.++||||+||++|||++|++||.+....+ .+...+...... .. .
T Consensus 218 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~ 295 (464)
T 3ttj_A 218 -FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVR 295 (464)
T ss_dssp -CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHH
T ss_pred -cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhh
Confidence 12345689999999999999999999999999999999999999997532111 111111110000 00 0
Q ss_pred eeec----------ccccCC--cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 583 KVVD----------AHLLSQ--EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 583 ~~~~----------~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+. +..... ...........+.++++|+.+||+.||++|||+.|+
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~ 353 (464)
T 3ttj_A 296 NYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDA 353 (464)
T ss_dssp HHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred hHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 0000 000000 000001112236789999999999999999998763
No 110
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.94 E-value=2.4e-27 Score=236.43 Aligned_cols=200 Identities=18% Similarity=0.164 Sum_probs=138.6
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999999987 579999999997542 33456788999999999999999999987654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+...... ....
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~ 159 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--RCYS 159 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC--SCCC
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcc--cccc
Confidence 4999998653322 2234
Q ss_pred cccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC---ccceeec---cc--
Q 037488 518 QTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI---SVMKVVD---AH-- 588 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~-- 588 (628)
..+||+.|+|||++.+.. |+.++||||+||++|||++|..|+.................... .+..... ..
T Consensus 160 ~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T 3o0g_A 160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239 (292)
T ss_dssp SCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCC
T ss_pred CCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccccccccc
Confidence 567999999999998766 89999999999999999999888643222222222222211111 0000000 00
Q ss_pred -ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 -LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 -~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...............+.++.+++.+||+.||++|||++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 280 (292)
T 3o0g_A 240 PMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEA 280 (292)
T ss_dssp CCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHH
Confidence 0000000111223456789999999999999999998763
No 111
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.94 E-value=6.6e-27 Score=235.06 Aligned_cols=206 Identities=28% Similarity=0.459 Sum_probs=150.3
Q ss_pred cccchhhHHHHHhhcCCCcc------cccccCCccEEEEEEecCCcEEEEEEeecc----chhHHHHHHHHHHHhhcccC
Q 037488 413 GIRRLTYLELFQATNGFSEN------NLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ----YREAFKNFDIECDMMKHIRH 482 (628)
Q Consensus 413 ~~~~~~~~~l~~~~~~~~~~------~~ig~G~~g~V~~~~~~~~~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~h 482 (628)
....|++.++..++++|... +.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34567888899999999877 8899999999999987 4889999998642 23446778999999999999
Q ss_pred CCcceeeeeccCCCcc----------------------------------------------------------------
Q 037488 483 RNLIKIISSCSNDDFK---------------------------------------------------------------- 498 (628)
Q Consensus 483 ~niv~l~~~~~~~~~~---------------------------------------------------------------- 498 (628)
|||+++++++..++..
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~ 169 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA 169 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC
Confidence 9999999987653311
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWV 573 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~ 573 (628)
+|||+++...............||+.|+|||++.+ .++.++||||+||++|||++|++||....... ....+.
T Consensus 170 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~ 247 (307)
T 2nru_A 170 FTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIK 247 (307)
T ss_dssp CCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHH
T ss_pred CcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHH
Confidence 39999986544332223344579999999998865 58999999999999999999999997643322 122222
Q ss_pred HhhcC--CccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 574 NDLLP--ISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 574 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... ......+++.+ ...+..++.++.+++.+||+.||++|||+.||
T Consensus 248 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l 297 (307)
T 2nru_A 248 EEIEDEEKTIEDYIDKKM-------NDADSTSVEAMYSVASQCLHEKKNKRPDIKKV 297 (307)
T ss_dssp HHHHTTSCCHHHHSCSSC-------SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred HHhhhhhhhhhhhccccc-------cccchHHHHHHHHHHHHHcCCCcccCcCHHHH
Confidence 11111 11111111111 11234567789999999999999999998763
No 112
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.94 E-value=1.4e-27 Score=239.83 Aligned_cols=182 Identities=25% Similarity=0.318 Sum_probs=128.8
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
..++|...+.||+|+||.||+|+. .|+.||||++.... ....+.+.+|++++++++|||||++++++..++..
T Consensus 35 ~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 113 (309)
T 3p86_A 35 PWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVT 113 (309)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEE
T ss_pred ChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEE
Confidence 356788899999999999999987 48899999986543 34457789999999999999999999987653311
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 114 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 114 EYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp ECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred ecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 3999887543221
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
.......||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 194 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~--~~~~~~~---------------- 253 (309)
T 3p86_A 194 --LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQ--VVAAVGF---------------- 253 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHH--HHHHHHH----------------
T ss_pred --cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHh----------------
Confidence 12244679999999999999999999999999999999999999997532211 1111100
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..++.++.+++.+||+.||++|||+.|+
T Consensus 254 -~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 289 (309)
T 3p86_A 254 -KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATI 289 (309)
T ss_dssp -SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 000112334556779999999999999999998763
No 113
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.94 E-value=1.5e-27 Score=241.94 Aligned_cols=175 Identities=18% Similarity=0.249 Sum_probs=134.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|+++++.++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 46788999999999999999987 579999999997542 23456788999999999999999999887654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... ..
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~--~~ 161 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 161 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT--CC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC--Cc
Confidence 4999998643322 12
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
..+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....... ....
T Consensus 162 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i------------~~~~--- 221 (337)
T 1o6l_A 162 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELI------------LMEE--- 221 (337)
T ss_dssp BCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC---
T ss_pred ccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH-----HHHHHHH------------HcCC---
Confidence 3456899999999999999999999999999999999999999965211 1111110 0000
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERV 623 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rp 623 (628)
...+..++.++.+++.+||+.||++||
T Consensus 222 -~~~p~~~s~~~~~li~~lL~~dP~~R~ 248 (337)
T 1o6l_A 222 -IRFPRTLSPEAKSLLAGLLKKDPKQRL 248 (337)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHHhc
Confidence 112234567799999999999999999
No 114
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.94 E-value=2.6e-27 Score=243.92 Aligned_cols=183 Identities=24% Similarity=0.389 Sum_probs=137.6
Q ss_pred hcCCCcccccccCCccEEEEEEe--------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI--------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHI-RHRNLIKIISSCSND 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 495 (628)
.++|...+.||+|+||.||+|+. .++..||||+++.. .....+.+.+|+++++++ +|||||+++++|..+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 46788889999999999999975 24568999999754 334567799999999999 899999999987532
Q ss_pred Ccc-----------------------------------------------------------------------------
Q 037488 496 DFK----------------------------------------------------------------------------- 498 (628)
Q Consensus 496 ~~~----------------------------------------------------------------------------- 498 (628)
+..
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~ 239 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 239 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCC
Confidence 100
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHW 572 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~ 572 (628)
+|||+|+...............||+.|+|||++.+..|+.++|||||||++|||+| |+.||.+.... .....
T Consensus 240 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~--~~~~~ 317 (370)
T 2psq_A 240 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFKL 317 (370)
T ss_dssp CCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHH
T ss_pred CCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 39999986644332222344568899999999999999999999999999999999 99999753221 11111
Q ss_pred HHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 573 VNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 318 ~~~~------------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~el 355 (370)
T 2psq_A 318 LKEG------------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 355 (370)
T ss_dssp HHTT------------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcC------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1100 0112334567789999999999999999998764
No 115
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.94 E-value=9.5e-28 Score=245.25 Aligned_cols=183 Identities=20% Similarity=0.213 Sum_probs=122.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
..+.|...+.||+|+||.||+|+. .+++.||||+++... ..+.+.+|++++++++||||++++++|..++..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 356789999999999999999997 468899999997543 335678899999999999999999987654311
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+++......
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--- 205 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV--- 205 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc---
Confidence 3999988653321
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||............... ....
T Consensus 206 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~----------------~~~~ 269 (349)
T 2w4o_A 206 LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN----------------CEYY 269 (349)
T ss_dssp -------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT----------------TCCC
T ss_pred ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh----------------CCCc
Confidence 224467999999999999999999999999999999999999999653221111111111 0000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 270 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 303 (349)
T 2w4o_A 270 FISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303 (349)
T ss_dssp CCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred cCCchhhhCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 1111223456779999999999999999998653
No 116
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.94 E-value=2e-27 Score=236.46 Aligned_cols=199 Identities=22% Similarity=0.233 Sum_probs=134.6
Q ss_pred cCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
++|...+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++||||+++++++..++..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788899999999999999998889999999996543 22346788999999999999999999988654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+...... .....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 159 (288)
T 1ob3_A 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--RKYTH 159 (288)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred cCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccc--ccccc
Confidence 3999998653221 12234
Q ss_pred ccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC---cccee-----ecccc
Q 037488 519 TLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI---SVMKV-----VDAHL 589 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~ 589 (628)
..||+.|+|||++.+. .++.++||||+||++|||++|++||....... ............ .+... .++..
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (288)
T 1ob3_A 160 EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNF 238 (288)
T ss_dssp --CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTC
T ss_pred ccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhccccccccc
Confidence 5799999999998764 58999999999999999999999997532211 111111111110 00000 00000
Q ss_pred cCCcc-cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQED-KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+ .........+.++.+++.+||+.||++|||+.|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 278 (288)
T 1ob3_A 239 TVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQA 278 (288)
T ss_dssp CCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 00000 0011123456789999999999999999998763
No 117
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.94 E-value=4.5e-28 Score=250.56 Aligned_cols=183 Identities=26% Similarity=0.400 Sum_probs=137.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++... ....+.|.+|++++++++|||||+++++|..++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 45778889999999999999998 479999999987542 33455788999999999999999999998754321
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~ 272 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASG 272 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCS
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecC
Confidence 499999864332111111
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+|+.|+|||++.++.|+.++|||||||++|||+| |+.||...... .....+.. ..
T Consensus 273 ~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~--~~~~~~~~------------------~~ 332 (377)
T 3cbl_A 273 GLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ--QTREFVEK------------------GG 332 (377)
T ss_dssp SCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH--HHHHHHHT------------------TC
T ss_pred CCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------------CC
Confidence 22346888999999999999999999999999999999 99999753211 11111110 01
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+.+..++.++.+++.+||+.||++|||+.+|
T Consensus 333 ~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 365 (377)
T 3cbl_A 333 RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTI 365 (377)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 122334567789999999999999999998763
No 118
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.94 E-value=5e-27 Score=236.88 Aligned_cols=201 Identities=20% Similarity=0.223 Sum_probs=124.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
..++|...+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++++++|||||++++++..++..
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 457899999999999999999987 579999999997543 22346688999999999999999999987653211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 83 e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 162 (317)
T 2pmi_A 83 EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV 162 (317)
T ss_dssp ECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC
T ss_pred EecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc
Confidence 3999998653322
Q ss_pred cccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcC--Cccceee---
Q 037488 512 QSLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLP--ISVMKVV--- 585 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 585 (628)
. .....+||+.|+|||++.+. .|+.++||||+||++|||++|+.||...... ............ ......+
T Consensus 163 ~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~ 239 (317)
T 2pmi_A 163 N--TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE-EQLKLIFDIMGTPNESLWPSVTKL 239 (317)
T ss_dssp C--CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCTTTCGGGGGC
T ss_pred c--cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhHhhhhhhh
Confidence 1 22445799999999999764 6899999999999999999999999753221 111112111110 0000000
Q ss_pred ---cccccCCcc------cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 ---DAHLLSQED------KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ---~~~~~~~~~------~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+....... .....+...+.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~ 291 (317)
T 2pmi_A 240 PKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQA 291 (317)
T ss_dssp TTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 000000000 0011122356789999999999999999998763
No 119
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.94 E-value=3.8e-27 Score=234.02 Aligned_cols=183 Identities=18% Similarity=0.286 Sum_probs=138.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++..+...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 57899999999999999999987 569999999997543 34457788999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||++.......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~-- 162 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-- 162 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC--
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc--
Confidence 3999987654322
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 163 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~--~~~~~~~~---------------~~~ 224 (284)
T 3kk8_A 163 -AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH--RLYAQIKA---------------GAY 224 (284)
T ss_dssp -BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---------------TCC
T ss_pred -cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh--HHHHHHHh---------------ccc
Confidence 224467999999999999999999999999999999999999999653211 11111100 001
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+..++.++.+++.+||+.||++|||+.|+
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (284)
T 3kk8_A 225 DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQA 259 (284)
T ss_dssp CCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred cCCchhhcccCHHHHHHHHHHcccChhhCCCHHHH
Confidence 11111223456779999999999999999998763
No 120
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.94 E-value=1.9e-27 Score=249.18 Aligned_cols=185 Identities=20% Similarity=0.269 Sum_probs=130.7
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--------hhHHHHHHHHHHHhhcccCCCcceeeeeccCC
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--------REAFKNFDIECDMMKHIRHRNLIKIISSCSND 495 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 495 (628)
..++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++|||||++++++..+
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 457899999999999999999987 678999999997532 11223578999999999999999999887543
Q ss_pred Ccc--------------------------------------------------------------------ccccccccc
Q 037488 496 DFK--------------------------------------------------------------------ADFGMAKPL 507 (628)
Q Consensus 496 ~~~--------------------------------------------------------------------~DFGla~~~ 507 (628)
+.. +|||+|+..
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~ 292 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence 211 399999865
Q ss_pred cccCcccccccccccccccCcccccc---CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee
Q 037488 508 LKEDQSLIQTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584 (628)
Q Consensus 508 ~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (628)
.... .....+||+.|+|||++.+ ..|+.++||||+||++|||++|++||....... ........
T Consensus 293 ~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~--------- 359 (419)
T 3i6u_A 293 GETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS--------- 359 (419)
T ss_dssp C--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHT---------
T ss_pred CCCc---cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhc---------
Confidence 4322 2245679999999999864 568999999999999999999999997543222 22211111
Q ss_pred ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+..+..++.++.+++.+||+.||++|||+.|+
T Consensus 360 ------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 397 (419)
T 3i6u_A 360 ------GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397 (419)
T ss_dssp ------TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ------CCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHH
Confidence 11111122334567789999999999999999998753
No 121
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.94 E-value=6.7e-27 Score=236.57 Aligned_cols=180 Identities=16% Similarity=0.162 Sum_probs=116.2
Q ss_pred ccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-CCCcceeeeeccCCCcc-----------
Q 037488 432 NNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-HRNLIKIISSCSNDDFK----------- 498 (628)
Q Consensus 432 ~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~----------- 498 (628)
.+.||+|+||.||+|.. .+|+.||||++... ....+.+|+++++.++ |||||++++++.++...
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 37899999999999987 57999999999643 2345678999999997 99999999987654321
Q ss_pred ----------------------------------------------------------ccccccccccccCccccccccc
Q 037488 499 ----------------------------------------------------------ADFGMAKPLLKEDQSLIQTQTL 520 (628)
Q Consensus 499 ----------------------------------------------------------~DFGla~~~~~~~~~~~~~~~~ 520 (628)
+|||+|+...... ......+
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~~~~ 170 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--QPLKTPC 170 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--CcccccC
Confidence 3999998654332 2234567
Q ss_pred ccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC--ccHHHHHHhhcCCccceeecccccCCcccchh
Q 037488 521 ATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE--MTLKHWVNDLLPISVMKVVDAHLLSQEDKHFV 598 (628)
Q Consensus 521 gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (628)
||+.|+|||++.+..|+.++||||+||++|||++|+.||....... .......... ..+.......
T Consensus 171 ~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i------------~~~~~~~~~~ 238 (325)
T 3kn6_A 171 FTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKI------------KKGDFSFEGE 238 (325)
T ss_dssp -------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHH------------TTTCCCCCSH
T ss_pred CCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHH------------HcCCCCCCcc
Confidence 9999999999999999999999999999999999999997533211 1111111111 1111112222
Q ss_pred chhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 599 IKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 599 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+..++.++++++.+||+.||++|||+.|+
T Consensus 239 ~~~~~s~~~~~li~~~L~~dP~~Rpt~~el 268 (325)
T 3kn6_A 239 AWKNVSQEAKDLIQGLLTVDPNKRLKMSGL 268 (325)
T ss_dssp HHHTSCHHHHHHHHHHHCCCTTTCCCTTTS
T ss_pred cccCCCHHHHHHHHHHCCCChhHCCCHHHH
Confidence 334567789999999999999999999886
No 122
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.94 E-value=1.6e-27 Score=247.76 Aligned_cols=138 Identities=22% Similarity=0.249 Sum_probs=102.1
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhccc-CCCcceeeeeccCCCc---
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIR-HRNLIKIISSCSNDDF--- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~--- 497 (628)
..++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++++. |||||++++++..++.
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 457899999999999999999987 67999999998542 3445667889999999997 9999999998854321
Q ss_pred c---------------------------------------------------------------ccccccccccccC---
Q 037488 498 K---------------------------------------------------------------ADFGMAKPLLKED--- 511 (628)
Q Consensus 498 ~---------------------------------------------------------------~DFGla~~~~~~~--- 511 (628)
. +|||+|+......
T Consensus 87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 166 (388)
T 3oz6_A 87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166 (388)
T ss_dssp EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence 0 4999998653210
Q ss_pred ----------------cccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcc
Q 037488 512 ----------------QSLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEI 562 (628)
Q Consensus 512 ----------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~ 562 (628)
.....+..+||++|+|||++.+ ..|+.++||||+||++|||++|++||.+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 234 (388)
T 3oz6_A 167 NNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGS 234 (388)
T ss_dssp CCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred ccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCC
Confidence 0112244679999999999987 67999999999999999999999999753
No 123
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.94 E-value=6.6e-27 Score=236.33 Aligned_cols=200 Identities=15% Similarity=0.200 Sum_probs=140.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++......
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 45788899999999999999987 569999999997543 23356788999999999999999999876542200
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+|+...
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~ 167 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECC
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecC
Confidence 3999998764
Q ss_pred ccCcccccccccccccccCccccc--------cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHH--HHhhcC
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGR--------EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHW--VNDLLP 578 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~--~~~~~~ 578 (628)
.... .....||+.|+|||++. +..++.++|||||||++|||+||+.||............. .....+
T Consensus 168 ~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p 244 (319)
T 4euu_A 168 DDEQ---FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (319)
T ss_dssp TTCC---BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCC
T ss_pred CCCc---eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCC
Confidence 4322 24567999999999986 5679999999999999999999999997533222221111 111122
Q ss_pred Cccceeecccc------cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 579 ISVMKVVDAHL------LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 579 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+.... ..............+..+.+++.+||+.||++|||++|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~el 300 (319)
T 4euu_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQF 300 (319)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHH
T ss_pred cccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHh
Confidence 11111111000 001111223345677889999999999999999998763
No 124
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.94 E-value=3.4e-27 Score=240.81 Aligned_cols=178 Identities=25% Similarity=0.340 Sum_probs=133.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
...|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||+++++|..++..
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588889999999999999986 67999999999753 233456789999999999999999999987654311
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+.....
T Consensus 133 ~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----- 207 (348)
T 1u5q_A 133 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 207 (348)
T ss_dssp EECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----
T ss_pred EecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-----
Confidence 499999865322
Q ss_pred cccccccccccCccccc---cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 516 QTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
...+||+.|+|||++. ++.|+.++|||||||++|||++|+.||....... ......... .
T Consensus 208 -~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~---------~------ 270 (348)
T 1u5q_A 208 -NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNE---------S------ 270 (348)
T ss_dssp -CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSC---------C------
T ss_pred -CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcC---------C------
Confidence 3467999999999984 5679999999999999999999999996532110 011111000 0
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 271 ---~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l 303 (348)
T 1u5q_A 271 ---PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVL 303 (348)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCCCCCHHHHHHHHHHcccChhhCcCHHHH
Confidence 001122345679999999999999999998753
No 125
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.94 E-value=1.2e-27 Score=242.50 Aligned_cols=183 Identities=23% Similarity=0.335 Sum_probs=129.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcE----EEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGME----VAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
.++|...+.||+|+||.||+|++ .+|+. ||+|.+.... ....+.+.+|+.++++++|||||+++++|..+...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 93 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEE
Confidence 45688889999999999999986 44554 5788775432 33457789999999999999999999988664321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+........
T Consensus 94 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 173 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp EEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence 399999876444333
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..|+.++|||||||++|||+| |+.||...... .........
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~~~~---------------- 235 (327)
T 3poz_A 174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKG---------------- 235 (327)
T ss_dssp ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTT----------------
T ss_pred ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH--HHHHHHHcC----------------
Confidence 23334568999999999999999999999999999999999 99999753221 121111110
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 236 --~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~el 269 (327)
T 3poz_A 236 --ERLPQPPICTIDVYMIMVKCWMIDADSRPKFREL 269 (327)
T ss_dssp --CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHH
T ss_pred --CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 0111233456679999999999999999998763
No 126
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.94 E-value=4.3e-27 Score=239.13 Aligned_cols=182 Identities=19% Similarity=0.269 Sum_probs=137.2
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 498 (628)
...++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|.+++..+ +||||+++++++.+++..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 4567899999999999999999997 579999999997542 23356678899999987 999999999887654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+......
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 172 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD- 172 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT-
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC-
Confidence 4999998643222
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
....+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+... ....... ....
T Consensus 173 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i------------~~~~ 234 (345)
T 1xjd_A 173 -AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE-----EELFHSI------------RMDN 234 (345)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC
T ss_pred -CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHH------------HhCC
Confidence 123556899999999999999999999999999999999999999965321 1111110 0000
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCC-CC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK-EI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~-ev 628 (628)
...+..++.++.+++.+||+.||++||++. ||
T Consensus 235 ----~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i 267 (345)
T 1xjd_A 235 ----PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDI 267 (345)
T ss_dssp ----CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCG
T ss_pred ----CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHH
Confidence 112233566799999999999999999986 53
No 127
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.94 E-value=1.8e-27 Score=235.05 Aligned_cols=179 Identities=18% Similarity=0.269 Sum_probs=115.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 36799999999999999999986 679999999996532 23356788999999999999999999988654321
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...... ..
T Consensus 92 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~~ 168 (275)
T 2eue_A 92 IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN---FL 168 (275)
T ss_dssp EECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC------------
T ss_pred ehhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCcc---cc
Confidence 3999998653322 12
Q ss_pred ccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
...+||+.|+|||++.+..+ +.++||||+||++|||++|+.||..... ........ ..
T Consensus 169 ~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~------------~~---- 227 (275)
T 2eue_A 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-----PVLFKNIS------------NG---- 227 (275)
T ss_dssp ------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHH------------HT----
T ss_pred cCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHH------------hC----
Confidence 34579999999999988776 7899999999999999999999965321 11111100 00
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~ 260 (275)
T 2eue_A 228 VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEI 260 (275)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHH
Confidence 011223356679999999999999999998763
No 128
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.94 E-value=8.7e-27 Score=239.79 Aligned_cols=178 Identities=22% Similarity=0.232 Sum_probs=134.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|+++++.++|||||++++++...+..
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 35788899999999999999987 568999999997532 23356788999999999999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---~ 170 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---Q 170 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC---C
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC---c
Confidence 4999998754332 2
Q ss_pred cccccccccccCcccccc---CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 516 QTQTLATIGYMAPEYGRE---GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~---~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
..+.+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||....... ......... .
T Consensus 171 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~------------~-- 234 (384)
T 4fr4_A 171 ITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFE------------T-- 234 (384)
T ss_dssp BCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHH------------H--
T ss_pred eeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHh------------h--
Confidence 356789999999999874 458999999999999999999999997532221 111111100 0
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
.....+..++.++.+++.+||+.||++||+
T Consensus 235 --~~~~~p~~~s~~~~~li~~lL~~dP~~R~s 264 (384)
T 4fr4_A 235 --TVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264 (384)
T ss_dssp --CCCCCCTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred --cccCCCCcCCHHHHHHHHHHhcCCHhHhcc
Confidence 001123345677999999999999999998
No 129
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.93 E-value=6.9e-27 Score=232.47 Aligned_cols=181 Identities=27% Similarity=0.395 Sum_probs=134.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchh-------HHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYRE-------AFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++.+...
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 97 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR 97 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTE
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCe
Confidence 46788889999999999999987 67999999998643211 12678999999999999999999998754321
Q ss_pred c------------------------------------------------------------------------ccccccc
Q 037488 498 K------------------------------------------------------------------------ADFGMAK 505 (628)
Q Consensus 498 ~------------------------------------------------------------------------~DFGla~ 505 (628)
. +|||+|+
T Consensus 98 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 98 MVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp EEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 1 3788776
Q ss_pred cccccCcccccccccccccccCccccc--cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGR--EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK 583 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (628)
..... .....||+.|+|||++. +..++.++||||+||++|||++|+.||.................
T Consensus 178 ~~~~~-----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~------- 245 (287)
T 4f0f_A 178 QSVHS-----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREE------- 245 (287)
T ss_dssp CCSSC-----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHS-------
T ss_pred ccccc-----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhcc-------
Confidence 43221 23467999999999984 45689999999999999999999999976433222111111110
Q ss_pred eecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 584 VVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+..++.++.+++.+||+.||++|||+.|+
T Consensus 246 ----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 280 (287)
T 4f0f_A 246 ----------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYI 280 (287)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 01112334556779999999999999999998763
No 130
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.8e-25 Score=220.73 Aligned_cols=210 Identities=23% Similarity=0.276 Sum_probs=170.1
Q ss_pred CCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEc
Q 037488 159 TNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHL 238 (628)
Q Consensus 159 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (628)
++|+.|++++|.+++..+..|..+++|++|++++|++.+..+..|.++++|++|++++|.+++..+..|..+++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46788888888887666667888888888888888888777777888888888888888888777778888888888888
Q ss_pred cCCcCCcCCC-CccCCCCCcEEEcCCCCCcCC-CCCcccCCccccEEEcCCCcCCCCCccccCCCCCCC----EEeCCCC
Q 037488 239 GSNQITSIPS-TLLNLKDILYLNLSSNFFTGP-LPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQ----YLFLEYN 312 (628)
Q Consensus 239 ~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~-~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~l~~n 312 (628)
++|.++.++. .+..+++|++|++++|.+++. +|..+..+++|++|++++|++++..+..+..+.+|+ .|++++|
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 8888887765 567788888888888888764 477888888888888888888877777777666666 8999999
Q ss_pred cCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC
Q 037488 313 RLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE 369 (628)
Q Consensus 313 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 369 (628)
++++..+..+.. .+|+.|++++|.++++.+..+..+++|+.|++++|++.+..+..
T Consensus 188 ~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 188 PMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred cccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 998666655544 47999999999999887777888999999999999999887654
No 131
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93 E-value=2e-27 Score=244.55 Aligned_cols=183 Identities=22% Similarity=0.345 Sum_probs=136.5
Q ss_pred hcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.++|...+.||+|+||.||+|++ .+++.||||+++.. .......+.+|+.++++++|||||++++++..+...
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688889999999999999984 24778999999653 344456789999999999999999999987543211
Q ss_pred ----------------------------------------------------------------------------cccc
Q 037488 499 ----------------------------------------------------------------------------ADFG 502 (628)
Q Consensus 499 ----------------------------------------------------------------------------~DFG 502 (628)
+|||
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG 229 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 229 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCc
Confidence 3999
Q ss_pred ccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCcc
Q 037488 503 MAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISV 581 (628)
Q Consensus 503 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 581 (628)
+|+...............||+.|+|||++.+..|+.++|||||||++|||+| |+.||..... ......+...
T Consensus 230 ~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~--~~~~~~i~~~----- 302 (367)
T 3l9p_A 230 MARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSG----- 302 (367)
T ss_dssp HHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTT-----
T ss_pred cccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcC-----
Confidence 9986543332223344578999999999999999999999999999999998 9999965321 1111111100
Q ss_pred ceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 MKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 303 -------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ei 336 (367)
T 3l9p_A 303 -------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 336 (367)
T ss_dssp -------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 0111233456779999999999999999998764
No 132
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.93 E-value=4.1e-27 Score=236.18 Aligned_cols=186 Identities=27% Similarity=0.387 Sum_probs=131.8
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+.. ..+|+|+++.. .....+.+.+|++++++++||||+++++++..+...
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 112 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQW 112 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEec
Confidence 467888999999999999999864 35899988753 344567899999999999999999999987654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+............
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~ 192 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVE 192 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-----------
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccccc
Confidence 3999998654322222334
Q ss_pred cccccccccCccccc---cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 518 QTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~---~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...||+.|+|||++. +..++.++|||||||++|||++|+.||......+. .......... .+
T Consensus 193 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~-------~~------- 257 (307)
T 3lb7_A 193 QPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYA-------SP------- 257 (307)
T ss_dssp -CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCC-------CC-------
T ss_pred CCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCC-------Cc-------
Confidence 557999999999986 56789999999999999999999999975432211 1111111100 00
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 258 ~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i 291 (307)
T 3lb7_A 258 DLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQI 291 (307)
T ss_dssp CSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHH
T ss_pred chhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHH
Confidence 0111223467789999999999999999998763
No 133
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.93 E-value=4e-27 Score=252.01 Aligned_cols=182 Identities=19% Similarity=0.206 Sum_probs=136.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||+||+|+. .+|+.||||++.... ......+.+|++++++++|||||++++++......
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 45688999999999999999987 579999999996532 23456789999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~-- 178 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC---
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC--
Confidence 4999998654332
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
.....+||++|+|||++.+ .|+.++||||+||++|||++|++||.+... ...... ......
T Consensus 179 -~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~------------i~~~~~ 239 (486)
T 3mwu_A 179 -KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE-----YDILKR------------VETGKY 239 (486)
T ss_dssp ----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH------------HHHTCC
T ss_pred -ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------------HHhCCC
Confidence 2245679999999999875 599999999999999999999999965321 111111 011111
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+.+..++.++++++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~ 274 (486)
T 3mwu_A 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQC 274 (486)
T ss_dssp CSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 11222334567789999999999999999998653
No 134
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.93 E-value=4e-27 Score=235.55 Aligned_cols=182 Identities=21% Similarity=0.279 Sum_probs=130.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch--------------------------hHHHHHHHHHHHhh
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR--------------------------EAFKNFDIECDMMK 478 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 478 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999999987 6789999999964321 11346889999999
Q ss_pred cccCCCcceeeeeccCCC--cc----------------------------------------------------------
Q 037488 479 HIRHRNLIKIISSCSNDD--FK---------------------------------------------------------- 498 (628)
Q Consensus 479 ~l~h~niv~l~~~~~~~~--~~---------------------------------------------------------- 498 (628)
+++||||+++++++.+.. ..
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 999999999999876421 10
Q ss_pred -------ccccccccccccCcccccccccccccccCccccccCc---cCcccchhhHhHHHHHHhhCCCCCCcccCCCcc
Q 037488 499 -------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT 568 (628)
Q Consensus 499 -------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~ 568 (628)
+|||+|+....... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----- 244 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDA--LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----- 244 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSC--EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-----
T ss_pred CCCCEEEecCCCccccccccc--cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-----
Confidence 39999987543321 224567999999999998765 4789999999999999999999996521
Q ss_pred HHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 569 LKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+....... .. ..+....++.++.+++.+||+.||++|||+.|+
T Consensus 245 ~~~~~~~~~~~--------~~------~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~ 290 (298)
T 2zv2_A 245 IMCLHSKIKSQ--------AL------EFPDQPDIAEDLKDLITRMLDKNPESRIVVPEI 290 (298)
T ss_dssp HHHHHHHHHHC--------CC------CCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred HHHHHHHHhcc--------cC------CCCCccccCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 11111110000 00 001112346679999999999999999998763
No 135
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.93 E-value=5.6e-27 Score=242.01 Aligned_cols=183 Identities=20% Similarity=0.234 Sum_probs=135.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~-- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|..++.++ +|||||++++++..++..
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 46788999999999999999987 568999999997542 23345578899999887 899999999987654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... .
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--~ 208 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 208 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--C
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC--C
Confidence 4999998643322 2
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCc----cHHHHHHhhcCCccceeeccccc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEM----TLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
...+.+||+.|||||++.+..|+.++||||+||++|||++|++||........ ........ ...
T Consensus 209 ~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~------------i~~ 276 (396)
T 4dc2_A 209 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV------------ILE 276 (396)
T ss_dssp CBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHH------------HHH
T ss_pred ccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHH------------Hhc
Confidence 23567899999999999999999999999999999999999999964322110 01101100 000
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
. ....|..++.++.+++.+||+.||++||++.
T Consensus 277 ~----~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 308 (396)
T 4dc2_A 277 K----QIRIPRSLSVKAASVLKSFLNKDPKERLGCH 308 (396)
T ss_dssp C----CCCCCTTSCHHHHHHHHHHTCSCTTTSTTCS
T ss_pred c----ccCCCCcCCHHHHHHHHHHhcCCHhHcCCCC
Confidence 0 1123344567799999999999999999973
No 136
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.93 E-value=5.5e-27 Score=249.13 Aligned_cols=130 Identities=22% Similarity=0.244 Sum_probs=92.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++...+.
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 47899999999999999999987 57999999999653 34456778999999999999999999998843211
Q ss_pred c-----------------------------------------------------------------ccccccccccccCc
Q 037488 498 K-----------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 498 ~-----------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
. +|||+|+.......
T Consensus 132 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~ 211 (458)
T 3rp9_A 132 LYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPEN 211 (458)
T ss_dssp EEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTT
T ss_pred EEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccc
Confidence 0 49999987542211
Q ss_pred c-------------------------cccccccccccccCcccc-ccCccCcccchhhHhHHHHHHhhC
Q 037488 513 S-------------------------LIQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLIETFTR 555 (628)
Q Consensus 513 ~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwS~Gvvl~e~ltg 555 (628)
. ......+||++|||||++ .+..|+.++||||+||++|||++|
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 212 GNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp CCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred cccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 0 122446799999999986 456799999999999999999993
No 137
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.93 E-value=2.1e-27 Score=251.70 Aligned_cols=182 Identities=24% Similarity=0.368 Sum_probs=138.8
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..++|...+.||+|+||.||+|....++.||||+++... ...+.|.+|++++++++|||||++++++..+...
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~ 264 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM 264 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeec
Confidence 356788889999999999999999878899999997543 2457799999999999999999999988643211
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+...... .....
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~-~~~~~ 343 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNE-YTARE 343 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH-HHTTC
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc-eeccC
Confidence 4999998653321 11223
Q ss_pred cccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...+|+.|+|||++.++.|+.++|||||||++|||+| |+.||.+.... .....+... ..
T Consensus 344 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~------------------~~ 403 (454)
T 1qcf_A 344 GAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP--EVIRALERG------------------YR 403 (454)
T ss_dssp SSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHHHHHT------------------CC
T ss_pred CCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcC------------------CC
Confidence 3457889999999998999999999999999999999 99999753211 111111100 11
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+.+..++.++.+++.+||+.||++|||+.+|
T Consensus 404 ~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i 435 (454)
T 1qcf_A 404 MPRPENCPEELYNIMMRCWKNRPEERPTFEYI 435 (454)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 22334567789999999999999999998753
No 138
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.93 E-value=1.5e-27 Score=242.70 Aligned_cols=184 Identities=21% Similarity=0.239 Sum_probs=136.1
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~---- 498 (628)
..++|...+.||+|+||.||+|.. .+|+.||||+++.... .+.+|++++.++ +|||||++++++.+++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 356789999999999999999987 5799999999975432 235688889888 799999999987654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+.......
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 175 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG 175 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC
Confidence 39999986543322
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
...+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... .....+.... ..+.
T Consensus 176 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i------------~~~~ 239 (342)
T 2qr7_A 176 --LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARI------------GSGK 239 (342)
T ss_dssp --CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHH------------HHCC
T ss_pred --ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHH------------ccCC
Confidence 23456899999999999988899999999999999999999999975321 1122221111 0111
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..++.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 240 FSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp CCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 111112233467789999999999999999998653
No 139
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.93 E-value=4.7e-27 Score=232.40 Aligned_cols=181 Identities=18% Similarity=0.192 Sum_probs=136.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
.++|...+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.++...
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 46788899999999999999987 56889999999866555567899999999999999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~---~ 164 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK---M 164 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS---C
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc---c
Confidence 3999988654332 2
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.....||+.|+|||++.+. ++.++||||+||++|||++|+.||....... ...... ......
T Consensus 165 ~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~----------------~~~~~~ 226 (277)
T 3f3z_A 165 MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE-VMLKIR----------------EGTFTF 226 (277)
T ss_dssp BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH----------------HCCCCC
T ss_pred hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH-HHHHHH----------------hCCCCC
Confidence 2456799999999998754 9999999999999999999999996532111 011110 001111
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
....+..++.++.+++.+||+.||++|||+.|
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~ 258 (277)
T 3f3z_A 227 PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQ 258 (277)
T ss_dssp CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CchhhhcCCHHHHHHHHHHccCChhhCcCHHH
Confidence 11122245677999999999999999999865
No 140
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.93 E-value=4.5e-27 Score=237.96 Aligned_cols=183 Identities=20% Similarity=0.327 Sum_probs=133.9
Q ss_pred hcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
.++|...+.||+|+||.||+|+.. .+..||||+++.. .....+.+.+|++++++++||||++++++|.+++..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 457888899999999999999873 3456999999764 344567799999999999999999999987653321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+........
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 207 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----C
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccc
Confidence 399999876433211
Q ss_pred -cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 514 -LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 514 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
.......||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ........ .
T Consensus 208 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-----~~~~~~~~------------~ 270 (325)
T 3kul_A 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR-----DVISSVEE------------G 270 (325)
T ss_dssp CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH-----HHHHHHHT------------T
T ss_pred eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH-----HHHHHHHc------------C
Confidence 12233457889999999999999999999999999999999 99999653211 11111000 0
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 271 ---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ei 304 (325)
T 3kul_A 271 ---YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304 (325)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0112233567789999999999999999998764
No 141
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.93 E-value=7.3e-27 Score=239.73 Aligned_cols=185 Identities=19% Similarity=0.214 Sum_probs=126.9
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
..++|...+.||+|+||.||+|+. .+++.||||++..... ..+.+.+|+.+++.++|||||++++++..++..
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 356799999999999999999987 5799999999975432 235678999999999999999999987653321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~---~ 173 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS---Q 173 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC---C
Confidence 4999988533221 1
Q ss_pred cccccccccccCccccccCccCcc-cchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTN-GDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~-~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
....+||++|+|||++.+..++.+ +||||+||++|||++|+.||....... ............ ..
T Consensus 174 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~------------~~- 239 (361)
T 3uc3_A 174 PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSV------------KY- 239 (361)
T ss_dssp -------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTT------------CC-
T ss_pred CCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcC------------CC-
Confidence 244679999999999988888665 899999999999999999997643222 222222111110 00
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+....++.++.+|+.+||+.||++|||+.|+
T Consensus 240 -~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 240 -SIPDDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp -CCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred -CCCCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 011111345679999999999999999998763
No 142
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.93 E-value=4.2e-27 Score=234.69 Aligned_cols=182 Identities=21% Similarity=0.327 Sum_probs=131.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.++++++||||+++++++..++..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 46789999999999999999986 57999999998542 334467789999999999999999999988654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... ...
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~ 168 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS-LTQ 168 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC--------
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc-ccc
Confidence 3999998654322 112
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+||+.|+|||++.+..++.++||||+||++|||+||+.||.+.... .......... ....
T Consensus 169 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~-----~~~~~~~~~~-----------~~~~ 232 (294)
T 4eqm_A 169 TNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAV-----SIAIKHIQDS-----------VPNV 232 (294)
T ss_dssp ------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHH-----HHHHHHHSSC-----------CCCH
T ss_pred cCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-----HHHHHHhhcc-----------CCCc
Confidence 23457999999999999999999999999999999999999999753211 1111110000 0011
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
....+..++..+.+++.+||+.||++||+
T Consensus 233 ~~~~~~~~~~~l~~li~~~l~~dp~~R~~ 261 (294)
T 4eqm_A 233 TTDVRKDIPQSLSNVILRATEKDKANRYK 261 (294)
T ss_dssp HHHSCTTSCHHHHHHHHHHSCSSGGGSCS
T ss_pred chhcccCCCHHHHHHHHHHhcCCHhHccc
Confidence 11223345677999999999999999994
No 143
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.93 E-value=1.6e-26 Score=228.39 Aligned_cols=185 Identities=22% Similarity=0.290 Sum_probs=139.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.+++.++||||+++++++.++...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46788999999999999999987 579999999997543 33456789999999999999999999987643211
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+++............
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 165 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN 165 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhccc
Confidence 3999998654332222234
Q ss_pred cccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...||+.|+|||++.+..+ +.++||||+||++|||++|+.||............+..... .
T Consensus 166 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~------------------~ 227 (276)
T 2yex_A 166 KMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT------------------Y 227 (276)
T ss_dssp CCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCT------------------T
T ss_pred CCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhccc------------------c
Confidence 5679999999999988775 78999999999999999999999764433222322221100 0
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+...+.++.+++.+||+.||++|||+.|+
T Consensus 228 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 259 (276)
T 2yex_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDI 259 (276)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred cCchhhcCHHHHHHHHHHCCCCchhCCCHHHH
Confidence 11122346678999999999999999998753
No 144
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.93 E-value=5.2e-27 Score=241.37 Aligned_cols=189 Identities=20% Similarity=0.324 Sum_probs=140.0
Q ss_pred HHHHhhcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcc-cCCCcceeeeec
Q 037488 421 ELFQATNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHI-RHRNLIKIISSC 492 (628)
Q Consensus 421 ~l~~~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 492 (628)
.+....++|...+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|+++++++ +|||||+++++|
T Consensus 16 ~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~ 95 (359)
T 3vhe_A 16 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 95 (359)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeee
Confidence 3445678899999999999999999973 356899999997643 34456789999999999 899999999876
Q ss_pred cCCCc---------------------------------------------------------------------------
Q 037488 493 SNDDF--------------------------------------------------------------------------- 497 (628)
Q Consensus 493 ~~~~~--------------------------------------------------------------------------- 497 (628)
...+.
T Consensus 96 ~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (359)
T 3vhe_A 96 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSD 175 (359)
T ss_dssp CSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC----------------------------------------------
T ss_pred ecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccch
Confidence 43110
Q ss_pred --------------c--------------------------------------------ccccccccccccCcccccccc
Q 037488 498 --------------K--------------------------------------------ADFGMAKPLLKEDQSLIQTQT 519 (628)
Q Consensus 498 --------------~--------------------------------------------~DFGla~~~~~~~~~~~~~~~ 519 (628)
. +|||+|+..............
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~ 255 (359)
T 3vhe_A 176 VEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA 255 (359)
T ss_dssp --------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--C
T ss_pred hhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhcccc
Confidence 1 399999866444333334456
Q ss_pred cccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchh
Q 037488 520 LATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFV 598 (628)
Q Consensus 520 ~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (628)
.||+.|+|||++.+..|+.++|||||||++|||+| |+.||........ ........ ....
T Consensus 256 ~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~-~~~~~~~~------------------~~~~ 316 (359)
T 3vhe_A 256 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEG------------------TRMR 316 (359)
T ss_dssp EECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHH-HHHHHHHT------------------CCCC
T ss_pred CCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHH-HHHHHHcC------------------CCCC
Confidence 79999999999999999999999999999999999 9999976432221 11111110 0111
Q ss_pred chhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 599 IKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 599 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+..++.++.+++.+||+.||++|||+.||
T Consensus 317 ~~~~~~~~l~~li~~~l~~dP~~Rps~~el 346 (359)
T 3vhe_A 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSEL 346 (359)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 223456679999999999999999998764
No 145
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.93 E-value=5.2e-27 Score=239.53 Aligned_cols=178 Identities=20% Similarity=0.245 Sum_probs=131.2
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|.++++.+ +|||||++++++..++..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999999987 579999999997542 33456678999999988 799999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~-- 178 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG-- 178 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC----
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC--
Confidence 4999998643322
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
....+.+||+.|||||++.+..|+.++||||+||++|||++|++||..... ....... ....
T Consensus 179 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~i------------~~~~- 240 (353)
T 3txo_A 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAI------------LNDE- 240 (353)
T ss_dssp -------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC-
T ss_pred ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH-----HHHHHHH------------HcCC-
Confidence 223456899999999999999999999999999999999999999975321 1111111 0011
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
...+...+.++.+++.+||+.||++||++
T Consensus 241 ---~~~p~~~~~~~~~li~~lL~~dP~~R~~~ 269 (353)
T 3txo_A 241 ---VVYPTWLHEDATGILKSFMTKNPTMRLGS 269 (353)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSSGGGSTTS
T ss_pred ---CCCCCCCCHHHHHHHHHHhhhCHHHccCC
Confidence 11223356679999999999999999997
No 146
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.93 E-value=6.8e-27 Score=236.45 Aligned_cols=183 Identities=16% Similarity=0.203 Sum_probs=137.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch------hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR------EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|+.++++++||||+++++++.+++..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 45688899999999999999987 5799999999975321 1356789999999999999999999987653311
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 3899888654
Q ss_pred ccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........
T Consensus 171 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~i~----------- 231 (321)
T 2a2a_A 171 DGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK-----QETLANIT----------- 231 (321)
T ss_dssp TTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH-----HHHHHHHH-----------
T ss_pred ccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHH-----------
Confidence 322 12345799999999999999999999999999999999999999965321 11111100
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..........+...+.++.+++.+||+.||++|||+.|+
T Consensus 232 -~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 232 -SVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp -TTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred -hcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 001111122233456779999999999999999998753
No 147
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.93 E-value=3.6e-27 Score=235.53 Aligned_cols=194 Identities=21% Similarity=0.347 Sum_probs=135.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-----cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--c
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-----HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF--K 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~ 498 (628)
.++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||++++++|...+. .
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788899999999999999983 3689999999987666667889999999999999999999997642110 0
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 168 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC------
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCc
Confidence 3999998754332
Q ss_pred cc-cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccc-----eee
Q 037488 512 QS-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVM-----KVV 585 (628)
Q Consensus 512 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 585 (628)
.. .......||..|+|||++.+..++.++|||||||++|||+||..|+..... .+.......... ...
T Consensus 169 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 169 EFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPA------EFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHH------HHHHHHCTTCCTHHHHHHHH
T ss_pred ceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChH------HHHhhhcCccccchhHHHHH
Confidence 21 122334588899999999999999999999999999999999999864211 111000000000 000
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+. .. .......+..++.++.+++.+||+.||++|||+.|+
T Consensus 243 ~~-~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 282 (295)
T 3ugc_A 243 EL-LK--NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282 (295)
T ss_dssp HH-HH--TTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HH-Hh--ccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 00 00 011223345677889999999999999999998764
No 148
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.93 E-value=7.8e-27 Score=245.60 Aligned_cols=136 Identities=23% Similarity=0.310 Sum_probs=105.7
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 497 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++.....
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 467899999999999999999987 67899999999753 34456788999999999999999999998865421
Q ss_pred -c-----------------------------------------------------------------ccccccccccccC
Q 037488 498 -K-----------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 498 -~-----------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
. +|||+|+......
T Consensus 104 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 104 ELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183 (432)
T ss_dssp CEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred eEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence 0 4999998764322
Q ss_pred cc--------------------cccccccccccccCcccc-ccCccCcccchhhHhHHHHHHhhCCCCCC
Q 037488 512 QS--------------------LIQTQTLATIGYMAPEYG-REGRVSTNGDVYSFGIMLIETFTRKKPTD 560 (628)
Q Consensus 512 ~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~ 560 (628)
.. ......+||++|+|||++ .+..|+.++||||+||++|||++|..||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 11 123556899999999986 55669999999999999999998655553
No 149
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.93 E-value=2.9e-27 Score=253.17 Aligned_cols=182 Identities=19% Similarity=0.258 Sum_probs=137.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++......
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 45688899999999999999987 579999999996532 33457789999999999999999999987654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+......
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~- 183 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK- 183 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC-
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc-
Confidence 3999998654332
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.....+||++|+|||++.+ .|+.++||||+||++|||++|++||..... ......+ ....
T Consensus 184 --~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i---------------~~~~ 243 (484)
T 3nyv_A 184 --KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE--YDILKKV---------------EKGK 243 (484)
T ss_dssp --SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHH---------------HHCC
T ss_pred --ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH--HHHHHHH---------------HcCC
Confidence 2244579999999999876 699999999999999999999999975321 1111111 0111
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+.+..++.++++++.+||+.||++|||+.|+
T Consensus 244 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~ 279 (484)
T 3nyv_A 244 YTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDA 279 (484)
T ss_dssp CCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 111222334567789999999999999999998753
No 150
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.93 E-value=1.9e-26 Score=234.88 Aligned_cols=183 Identities=20% Similarity=0.229 Sum_probs=136.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~-- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|+++.. .....+.+.+|+.+++++ +|||||++++++..++..
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 35788899999999999999997 57999999999754 234456788999999988 899999999987654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... .
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~--~ 165 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 165 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT--C
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC--C
Confidence 4999998643222 1
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC----ccHHHHHHhhcCCccceeeccccc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE----MTLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
...+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||....... ......... ...
T Consensus 166 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~------------i~~ 233 (345)
T 3a8x_A 166 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV------------ILE 233 (345)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHH------------HHH
T ss_pred cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHH------------HHc
Confidence 2345689999999999999999999999999999999999999996432111 001111100 000
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
. ....|...+.++.+++.+||+.||++||++.
T Consensus 234 ~----~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 265 (345)
T 3a8x_A 234 K----QIRIPRSLSVKAASVLKSFLNKDPKERLGCH 265 (345)
T ss_dssp C----CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCC
T ss_pred C----CCCCCCCCCHHHHHHHHHHhcCCHhHCCCCC
Confidence 0 1112334567799999999999999999973
No 151
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.93 E-value=6.7e-27 Score=247.23 Aligned_cols=179 Identities=21% Similarity=0.257 Sum_probs=136.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch---hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR---EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+++++.++||||+++++++...+..
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46788899999999999999987 5799999999975432 2356788999999999999999999987654311
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+...... .
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~---~ 171 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---F 171 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC---C
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc---c
Confidence 4999998754322 2
Q ss_pred cccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 516 QTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
..+.+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+... ......... +.
T Consensus 172 ~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~------------~~-- 232 (476)
T 2y94_A 172 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV-----PTLFKKICD------------GI-- 232 (476)
T ss_dssp BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS-----HHHHHHHHT------------TC--
T ss_pred ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHhc------------CC--
Confidence 345689999999999998776 7899999999999999999999975321 111111100 00
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 233 --~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~ei 264 (476)
T 2y94_A 233 --FYTPQYLNPSVISLLKHMLQVDPMKRATIKDI 264 (476)
T ss_dssp --CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred --cCCCccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 11222345679999999999999999998763
No 152
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.93 E-value=2.6e-27 Score=240.53 Aligned_cols=173 Identities=21% Similarity=0.296 Sum_probs=134.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch--------hHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR--------EAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++||||+++++++.+++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 46789999999999999999986 6799999999975421 12345778999999999999999999876543
Q ss_pred cc-------------------------------------------------------------------ccccccccccc
Q 037488 497 FK-------------------------------------------------------------------ADFGMAKPLLK 509 (628)
Q Consensus 497 ~~-------------------------------------------------------------------~DFGla~~~~~ 509 (628)
.. +|||+|+....
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 21 39999986543
Q ss_pred cCcccccccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 510 EDQSLIQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 510 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
.. .....+||+.|+|||++.+..+ +.++||||+||++|||++|+.||...... ...
T Consensus 183 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------------------~~~- 239 (335)
T 3dls_A 183 GK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------------------VEA- 239 (335)
T ss_dssp TC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------------------TTT-
T ss_pred CC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------------------Hhh-
Confidence 32 1244679999999999998887 88999999999999999999999652110 000
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 240 -------~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~el 272 (335)
T 3dls_A 240 -------AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKL 272 (335)
T ss_dssp -------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------ccCCCcccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 011122346679999999999999999998753
No 153
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.93 E-value=1.2e-26 Score=231.04 Aligned_cols=186 Identities=25% Similarity=0.384 Sum_probs=126.6
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+.. ..||||+++.. .....+.+.+|++++++++||||+++++++..+...
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 100 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 100 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence 567899999999999999999864 35999999653 344567799999999999999999999977543311
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+++............
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 180 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE 180 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccccccc
Confidence 3999998654322222234
Q ss_pred cccccccccCccccc---cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 518 QTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~---~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...||+.|+|||++. +..++.++||||+||++|||++|+.||....... .......... ..+
T Consensus 181 ~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~-------~~~------- 245 (289)
T 3og7_A 181 QLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGS-------LSP------- 245 (289)
T ss_dssp ---CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTS-------CCC-------
T ss_pred ccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccc-------cCc-------
Confidence 457999999999986 5678999999999999999999999997643221 1111111100 000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 279 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRI 279 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 0011223456779999999999999999998763
No 154
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.93 E-value=8.9e-27 Score=234.19 Aligned_cols=200 Identities=22% Similarity=0.231 Sum_probs=135.2
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch-----hHHHHHHHHHHHhhccc---CCCcceeeeeccCC
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR-----EAFKNFDIECDMMKHIR---HRNLIKIISSCSND 495 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 495 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|++++++++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 467899999999999999999997 6799999999974321 12345677888877775 99999999987542
Q ss_pred Cc-----c-------------------------------------------------------------------ccccc
Q 037488 496 DF-----K-------------------------------------------------------------------ADFGM 503 (628)
Q Consensus 496 ~~-----~-------------------------------------------------------------------~DFGl 503 (628)
.. . +|||+
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 21 0 39999
Q ss_pred cccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC---c
Q 037488 504 AKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI---S 580 (628)
Q Consensus 504 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~---~ 580 (628)
|+...... .....+||+.|+|||++.+..|+.++||||+||++|||++|++||....... ............ .
T Consensus 167 a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 242 (308)
T 3g33_A 167 ARIYSYQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDD 242 (308)
T ss_dssp TTTSTTCC---CSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred ccccCCCc---ccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChhh
Confidence 98654322 2245679999999999999999999999999999999999999997532211 112222111100 0
Q ss_pred cceee---cccccCC-cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVV---DAHLLSQ-EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+.... ....... ..........++.++.+++.+||+.||++|||+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 294 (308)
T 3g33_A 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRA 294 (308)
T ss_dssp SCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHH
Confidence 00000 0000000 000011223456789999999999999999998763
No 155
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=7.4e-27 Score=240.23 Aligned_cols=197 Identities=24% Similarity=0.230 Sum_probs=132.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.+.|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++..+..
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 46789999999999999999987 67999999999543 33446778999999999999999999998765321
Q ss_pred --c---------------------------------------------------------------ccccccccccccCc
Q 037488 498 --K---------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 498 --~---------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
. +|||+|+.....
T Consensus 104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 181 (367)
T 1cm8_A 104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-- 181 (367)
T ss_dssp CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc--
Confidence 0 499999865322
Q ss_pred ccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC--ccceeec---
Q 037488 513 SLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI--SVMKVVD--- 586 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--- 586 (628)
....+||++|+|||++.+ ..|+.++||||+||++|||++|++||.+..... .+.......... .....+.
T Consensus 182 ---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~~~ 257 (367)
T 1cm8_A 182 ---MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQSDE 257 (367)
T ss_dssp ---CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSCHH
T ss_pred ---cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhhHH
Confidence 245689999999999887 679999999999999999999999997532111 111111111000 0000000
Q ss_pred -----ccccCC-cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 -----AHLLSQ-EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 -----~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+... ...........++++.+|+.+||+.||++|||+.|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~ 305 (367)
T 1cm8_A 258 AKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEA 305 (367)
T ss_dssp HHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHH
Confidence 000000 000011223456789999999999999999998753
No 156
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.93 E-value=6.4e-27 Score=250.79 Aligned_cols=182 Identities=17% Similarity=0.188 Sum_probs=133.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.+.|...+.||+|+||.||+|+. .+++.||||++.... ......+.+|+++++.++|||||+++++|..+...
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 35688899999999999999987 578999999997542 23356788999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~-- 193 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK-- 193 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB--
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc--
Confidence 3999998754332
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
.....+||++|+|||++. +.|+.++||||+||++|||++|++||...... ...... .....
T Consensus 194 -~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-----~~~~~i------------~~~~~ 254 (494)
T 3lij_A 194 -KMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-----EILRKV------------EKGKY 254 (494)
T ss_dssp -CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-----HHHHHH------------HHTCC
T ss_pred -cccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHH------------HhCCC
Confidence 224567999999999986 56999999999999999999999999753221 111110 01111
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+.+..++.++++++.+||+.||++|||+.|+
T Consensus 255 ~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~ 289 (494)
T 3lij_A 255 TFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQA 289 (494)
T ss_dssp CCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCchhcccCCHHHHHHHHHHCCCChhhCccHHHH
Confidence 11122233567789999999999999999998763
No 157
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.93 E-value=4e-27 Score=237.04 Aligned_cols=185 Identities=19% Similarity=0.269 Sum_probs=129.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 497 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++.. .......+.+|++++++++|||||++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46789999999999999999997 67999999999754 23345678999999999999999999987643210
Q ss_pred --c----------------------------------------------------------------ccccccccccccC
Q 037488 498 --K----------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 498 --~----------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
. +|||+|+......
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 170 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSG 170 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-------
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccc
Confidence 0 3999998654332
Q ss_pred cc-cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccccc
Q 037488 512 QS-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 512 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ..... ..
T Consensus 171 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~-----~~~~~------------~~ 233 (311)
T 3ork_A 171 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS-----VAYQH------------VR 233 (311)
T ss_dssp -----------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-----HHHHH------------HH
T ss_pred cccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-----HHHHH------------hc
Confidence 11 12234569999999999999999999999999999999999999996532211 11000 00
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
.........+..++.++.+++.+||+.||++||++.+
T Consensus 234 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~ 270 (311)
T 3ork_A 234 EDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAA 270 (311)
T ss_dssp CCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHH
T ss_pred CCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHH
Confidence 0000111122345677999999999999999998654
No 158
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.93 E-value=1.9e-27 Score=246.88 Aligned_cols=190 Identities=21% Similarity=0.213 Sum_probs=139.3
Q ss_pred HHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 421 ELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 421 ~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
+.....++|...+.||+|+||.||+|+. .+++.||+|+++... ....+.+.+|+.+++.++|||||+++++|.+++
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 3445678999999999999999999987 568999999997532 122345789999999999999999999886644
Q ss_pred cc-----------------------------------------------------------------ccccccccccccC
Q 037488 497 FK-----------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 497 ~~-----------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
.. +|||+|+......
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 21 4999998754332
Q ss_pred cccccccccccccccCccccccCc----cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGR----VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
.....+.+||+.|||||++.+.. |+.++||||+||++|||++|++||...... .....+...
T Consensus 223 -~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~------------ 288 (410)
T 3v8s_A 223 -MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNH------------ 288 (410)
T ss_dssp -EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTH------------
T ss_pred -cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhc------------
Confidence 12234678999999999998655 899999999999999999999999653211 111111100
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCccc--CCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEE--RVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~ev 628 (628)
.....++.+..++.++++|+.+||+.+|++ ||++.||
T Consensus 289 ----~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei 327 (410)
T 3v8s_A 289 ----KNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEI 327 (410)
T ss_dssp ----HHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHH
T ss_pred ----cccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHH
Confidence 000011112235677999999999999988 9998653
No 159
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.93 E-value=7.8e-27 Score=234.89 Aligned_cols=173 Identities=20% Similarity=0.226 Sum_probs=133.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+.+++.++|||||++++++.+++..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46788999999999999999987 579999999997542 23356678999999999999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+.....
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~----- 159 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV----- 159 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-----
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc-----
Confidence 499999865322
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
..+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....... ....
T Consensus 160 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~i------------~~~~--- 219 (318)
T 1fot_A 160 TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT-----MKTYEKI------------LNAE--- 219 (318)
T ss_dssp BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHH------------HHCC---
T ss_pred cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHH------------HhCC---
Confidence 2456899999999999999999999999999999999999999965321 1111110 0000
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
...+...+.++.+++.+||+.||++||+
T Consensus 220 -~~~p~~~~~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 220 -LRFPPFFNEDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSCTTTCTT
T ss_pred -CCCCCCCCHHHHHHHHHHhccCHHHcCC
Confidence 1122334667999999999999999993
No 160
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.93 E-value=2.1e-26 Score=237.51 Aligned_cols=198 Identities=19% Similarity=0.140 Sum_probs=129.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+.
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 47899999999999999999987 57999999999753 23445678899999999999999999998765431
Q ss_pred -c---------------------------------------------------------------ccccccccccccCcc
Q 037488 498 -K---------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 498 -~---------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
. +|||+|+......
T Consensus 104 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~-- 181 (371)
T 2xrw_A 104 DVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 181 (371)
T ss_dssp EEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------
T ss_pred ceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc--
Confidence 0 3999998653321
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee---ec----
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV---VD---- 586 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---- 586 (628)
.....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.+..... ....... .......+. +.
T Consensus 182 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~-~~~~~~~~~~~~~~~~~~ 258 (371)
T 2xrw_A 182 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIE-QLGTPCPEFMKKLQPTVR 258 (371)
T ss_dssp ---------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHC--CCCCCHHHHTTSCHHHH
T ss_pred -ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-HhCCCCHHHHHHhhhHHH
Confidence 2245679999999999999999999999999999999999999997532110 0111110 000000000 00
Q ss_pred ------cc--------ccC--CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 ------AH--------LLS--QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ------~~--------~~~--~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+. ... ..+.....+...+.++++|+.+||+.||++|||++|+
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~ 316 (371)
T 2xrw_A 259 TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEA 316 (371)
T ss_dssp HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHH
Confidence 00 000 0000111122347789999999999999999998763
No 161
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.93 E-value=4.6e-27 Score=237.91 Aligned_cols=198 Identities=18% Similarity=0.164 Sum_probs=130.3
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchh-HHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYRE-AFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
++|...+.||+|+||.||+|+. .+++.||||++...... ....+.+|++++++++||||+++++++..++..
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5788999999999999999997 57999999999754322 222456899999999999999999988654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+...... .....
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--~~~~~ 159 (324)
T 3mtl_A 82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--KTYDN 159 (324)
T ss_dssp CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCc--ccccc
Confidence 3999998653322 12244
Q ss_pred ccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC----ccceeecccc----
Q 037488 519 TLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI----SVMKVVDAHL---- 589 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---- 589 (628)
.+||++|+|||++.+ ..|+.++||||+||++|||++|+.||.+.... .....+...... .+........
T Consensus 160 ~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (324)
T 3mtl_A 160 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKTY 237 (324)
T ss_dssp ---CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCTTTSTTGGGCHHHHHT
T ss_pred ccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHhchhhhcchhhccc
Confidence 579999999999876 56899999999999999999999999763221 111111111111 1111100000
Q ss_pred --c-CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 --L-SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 --~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .............+.++.+|+.+||+.||++|||+.|+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 279 (324)
T 3mtl_A 238 NYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDA 279 (324)
T ss_dssp CCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHH
Confidence 0 00001112223456789999999999999999998764
No 162
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.93 E-value=1.2e-24 Score=215.94 Aligned_cols=207 Identities=24% Similarity=0.208 Sum_probs=184.2
Q ss_pred cccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCC
Q 037488 154 EISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNL 233 (628)
Q Consensus 154 ~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 233 (628)
.++++++++.+++++|.++ .+|..+. ++++.|+|++|++.+..+..|..+++|++|++++|.+++..+. ..+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCTTC
T ss_pred cccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCCcC
Confidence 4677889999999999998 4565553 6899999999999988888999999999999999999876543 788999
Q ss_pred cEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc
Q 037488 234 RSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR 313 (628)
Q Consensus 234 ~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 313 (628)
++|++++|+++.+|..+..+++|++|++++|++++..+..|..+++|+.|+|++|++++..+..|..+++|+.|++++|+
T Consensus 80 ~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 159 (290)
T 1p9a_G 80 GTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN 159 (290)
T ss_dssp CEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CEEECCCCcCCcCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCc
Confidence 99999999999999988899999999999999998888899999999999999999998888888999999999999999
Q ss_pred CcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecC
Q 037488 314 LQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 314 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
+++..+..|..+++|+.|++++|+++. +|..+....+|+.+++++|++.+..
T Consensus 160 l~~l~~~~~~~l~~L~~L~L~~N~l~~-ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 160 LTELPAGLLNGLENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred CCccCHHHhcCcCCCCEEECCCCcCCc-cChhhcccccCCeEEeCCCCccCcC
Confidence 997777778899999999999999985 5666677889999999999987654
No 163
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=2e-24 Score=212.37 Aligned_cols=205 Identities=25% Similarity=0.305 Sum_probs=177.4
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEcc
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
+.+.++++++.++ .+|..+. ++|++|+|++|++.+..+..|.++++|++|++++|.++...+..|..+++|++|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 5678888888887 4565443 578899999999987777788899999999999999987777778889999999999
Q ss_pred CCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccC
Q 037488 240 SNQITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSI 318 (628)
Q Consensus 240 ~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 318 (628)
+|+++.+|.. +..+++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|++++..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 9999988754 467889999999999999888888899999999999999999877777889999999999999999877
Q ss_pred ChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 319 PDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 319 ~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
+..|..+++|+.|++++|.++++.+..+..+++|+.|++++|++.+...
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 7789999999999999999998888788899999999999999887654
No 164
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.93 E-value=1.1e-26 Score=238.70 Aligned_cols=198 Identities=21% Similarity=0.196 Sum_probs=124.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 497 (628)
..++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+++++.++||||+++++++.....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 357899999999999999999986 67999999999653 33456778899999999999999999998754210
Q ss_pred ---c---------------------------------------------------------------ccccccccccccC
Q 037488 498 ---K---------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 498 ---~---------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
. +|||+|+.....
T Consensus 107 ~~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~- 185 (367)
T 2fst_X 107 NDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185 (367)
T ss_dssp CCCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred CeEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-
Confidence 0 499999864322
Q ss_pred cccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC--c-cceeecc
Q 037488 512 QSLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI--S-VMKVVDA 587 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~ 587 (628)
....+||++|+|||++.+ ..|+.++||||+||++|||++|++||.+.... ..+.......... . ...+...
T Consensus 186 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~~ 260 (367)
T 2fst_X 186 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSE 260 (367)
T ss_dssp ---------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCSCCHHHHTTCCCH
T ss_pred ----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHhhhH
Confidence 245689999999999887 67999999999999999999999999753211 1111111111000 0 0000000
Q ss_pred -------cccCCcc-cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 -------HLLSQED-KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 -------~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+..... .........++++.+|+.+||+.||++|||+.|+
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~ 309 (367)
T 2fst_X 261 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 309 (367)
T ss_dssp HHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHH
Confidence 0000000 0011122346779999999999999999998653
No 165
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.93 E-value=1.2e-26 Score=249.21 Aligned_cols=183 Identities=18% Similarity=0.186 Sum_probs=135.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch-------------hHHHHHHHHHHHhhcccCCCcceeee
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR-------------EAFKNFDIECDMMKHIRHRNLIKIIS 490 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 490 (628)
..+.|...+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 357899999999999999999987 5689999999975321 23467889999999999999999999
Q ss_pred eccCCCcc---------------------------------------------------------------------ccc
Q 037488 491 SCSNDDFK---------------------------------------------------------------------ADF 501 (628)
Q Consensus 491 ~~~~~~~~---------------------------------------------------------------------~DF 501 (628)
+|.++... +||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Df 193 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDF 193 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCC
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEEC
Confidence 87654321 399
Q ss_pred cccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc
Q 037488 502 GMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581 (628)
Q Consensus 502 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 581 (628)
|+|+...... .....+||++|+|||++. +.|+.++||||+||++|||++|++||.+... ......
T Consensus 194 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-----~~~~~~------ 258 (504)
T 3q5i_A 194 GLSSFFSKDY---KLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND-----QDIIKK------ 258 (504)
T ss_dssp TTCEECCTTS---CBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHH------
T ss_pred CCCEEcCCCC---ccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHH------
Confidence 9998664332 224567999999999987 4699999999999999999999999975321 111111
Q ss_pred ceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 MKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
............+..++.++++++.+||+.||++|||+.|+
T Consensus 259 ------i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~ 299 (504)
T 3q5i_A 259 ------VEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEA 299 (504)
T ss_dssp ------HHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ------HHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 11111111222334567789999999999999999998763
No 166
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=228.74 Aligned_cols=180 Identities=20% Similarity=0.362 Sum_probs=115.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch---hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR---EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 46789999999999999999987 6799999999975422 2246789999999999999999999987654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+++.......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 167 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE-- 167 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC------
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC--
Confidence 39999986543221
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
......||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-----------------~~~~~~~~--- 227 (278)
T 3cok_A 168 KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-----------------TLNKVVLA--- 227 (278)
T ss_dssp ------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC----------------------CCSS---
T ss_pred cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-----------------HHHHHhhc---
Confidence 1234579999999999999899999999999999999999999997532211 00000000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+...+.++.+++.+||+.||++|||+.|+
T Consensus 228 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 260 (278)
T 3cok_A 228 -DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSV 260 (278)
T ss_dssp -CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -ccCCccccCHHHHHHHHHHcccCHhhCCCHHHH
Confidence 111233456679999999999999999998763
No 167
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.93 E-value=1.5e-26 Score=240.49 Aligned_cols=203 Identities=16% Similarity=0.234 Sum_probs=135.7
Q ss_pred hhcCCCcccccccC--CccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRG--GIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G--~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
..++|+..+.||+| +||.||+|+. .+|+.||||+++... ....+.+.+|+++++.++|||||++++++..++..
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 35678899999999 9999999997 579999999997543 34456788999999999999999999987543211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||.+.......
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~ 182 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHG 182 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETT
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecccc
Confidence 3999887543221
Q ss_pred cc-----cccccccccccccCcccccc--CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc---
Q 037488 512 QS-----LIQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV--- 581 (628)
Q Consensus 512 ~~-----~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~--- 581 (628)
.. ......+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||.+........ .......+...
T Consensus 183 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 261 (389)
T 3gni_B 183 QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLL-EKLNGTVPCLLDTS 261 (389)
T ss_dssp EECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHH-HC------------
T ss_pred ccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHH-HHhcCCCCcccccc
Confidence 11 11223479999999999987 579999999999999999999999997643322111 11110000000
Q ss_pred --------------------ceee---cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 --------------------MKVV---DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 --------------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... .+............+..++.++.+|+.+||+.||++|||+.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~el 331 (389)
T 3gni_B 262 TIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTL 331 (389)
T ss_dssp --------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred ccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHH
Confidence 0000 0000000000112334456789999999999999999998763
No 168
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=1.3e-26 Score=237.12 Aligned_cols=189 Identities=17% Similarity=0.219 Sum_probs=135.6
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-----hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-----REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
....++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++|||||+++++|.+++
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 45567899999999999999999987 678999999997532 344577899999999999999999998764321
Q ss_pred c-------------------------------------------------------------------------------
Q 037488 497 F------------------------------------------------------------------------------- 497 (628)
Q Consensus 497 ~------------------------------------------------------------------------------- 497 (628)
.
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 0
Q ss_pred -----------------------------cccccccccccccCc--ccccccccccccccCcccccc--CccCcccchhh
Q 037488 498 -----------------------------KADFGMAKPLLKEDQ--SLIQTQTLATIGYMAPEYGRE--GRVSTNGDVYS 544 (628)
Q Consensus 498 -----------------------------~~DFGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS 544 (628)
.+|||+|+.+..... ........||+.|+|||++.+ ..|+.++||||
T Consensus 182 ~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 182 HYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 039999986533221 112245579999999999875 67899999999
Q ss_pred HhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 545 FGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 545 ~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
+||++|||++|+.||......+ ....... ............++.++.+++.+||+.||++|||
T Consensus 262 lG~il~el~~g~~pf~~~~~~~-~~~~~~~----------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVNDAD-TISQVLN----------------KKLCFENPNYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHH-HHHHHHH----------------CCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHCCCCCCCCChHH-HHHHHHh----------------cccccCCcccccCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999996532211 1111111 0001111122235677999999999999999999
Q ss_pred CCCC
Q 037488 625 AKEI 628 (628)
Q Consensus 625 ~~ev 628 (628)
+.|+
T Consensus 325 ~~~~ 328 (345)
T 3hko_A 325 AMRA 328 (345)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 169
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.93 E-value=9.7e-27 Score=233.45 Aligned_cols=183 Identities=17% Similarity=0.197 Sum_probs=133.9
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||+++.......+.+.+|++++++++||||+++++++.++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 346788899999999999999987 57999999999865444456788999999999999999999987654311
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+++.....
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~---- 162 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG---- 162 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB----
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC----
Confidence 388888753221
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~---------------~~~~ 225 (304)
T 2jam_A 163 IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES--KLFEKIKE---------------GYYE 225 (304)
T ss_dssp TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHH---------------CCCC
T ss_pred ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHc---------------CCCC
Confidence 123346999999999999999999999999999999999999999653211 11111100 0011
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 226 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 259 (304)
T 2jam_A 226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKA 259 (304)
T ss_dssp CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred CCccccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1112233456779999999999999999998653
No 170
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=7e-25 Score=216.54 Aligned_cols=205 Identities=21% Similarity=0.195 Sum_probs=169.1
Q ss_pred ccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEcc
Q 037488 136 SMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLG 215 (628)
Q Consensus 136 ~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 215 (628)
.++.|++++|.+++..+..|.++++|+.|++++|.+.+..+..+..+++|++|++++|++.+..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444455544455567778889999999998887777788889999999999999988877888889999999999
Q ss_pred CCcCcccCCCCccCCCCCcEEEccCCcCCc--CCCCccCCCCCcEEEcCCCCCcCCCCCcccCCcccc----EEEcCCCc
Q 037488 216 SNKLSGFVPASFGNLTNLRSLHLGSNQITS--IPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLI----KIDLSMNN 289 (628)
Q Consensus 216 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~--lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~----~L~Ls~N~ 289 (628)
+|.+.+..+..+..+++|++|++++|.++. +|..+..+++|++|++++|.+++..+..+..+.+|+ .|++++|.
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 999988777788899999999999999987 678888899999999999999887777787777777 89999999
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCccccc
Q 037488 290 FSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGI 341 (628)
Q Consensus 290 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 341 (628)
+++..+..+.. .+|++|++++|++++..+..+..+++|+.|++++|.+...
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCC
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCccccc
Confidence 98766665554 4899999999999977777788999999999999999854
No 171
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.93 E-value=1.1e-26 Score=245.54 Aligned_cols=176 Identities=24% Similarity=0.362 Sum_probs=134.9
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-c-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF-K----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~----- 498 (628)
..++|...+.||+|+||.||+|... |+.||||+++... ..+.|.+|++++++++|||||+++++|...+. .
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3567888899999999999999876 7899999997543 45678999999999999999999998754321 0
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-------
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc-----
Confidence 399999854322
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....+|+.|+|||++.+..++.++|||||||++|||+| |+.||......+ ....+.. .
T Consensus 343 ~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~------------------~ 402 (450)
T 1k9a_A 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--VVPRVEK------------------G 402 (450)
T ss_dssp ----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT--HHHHHHT------------------T
T ss_pred ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc------------------C
Confidence 123468899999999999999999999999999999999 999997643221 1111110 0
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+...+..++.++.++|.+||+.||++|||+.|+
T Consensus 403 ~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l 436 (450)
T 1k9a_A 403 YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436 (450)
T ss_dssp CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 1122344677889999999999999999998763
No 172
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=1e-26 Score=228.88 Aligned_cols=181 Identities=23% Similarity=0.328 Sum_probs=136.1
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
.++|...+.||+|+||.||+|+..+++.||+|++..... ..+.+.+|++++++++||||+++++++.++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 467888899999999999999987788999999975432 235689999999999999999999988654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+...... ......
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~~ 166 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 166 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccc-cccccC
Confidence 3999998653322 112234
Q ss_pred ccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccch
Q 037488 519 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (628)
..||+.|+|||++.+..++.++||||+||++|||++ |+.||..... ......... . ...
T Consensus 167 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~-----~~~~~~~~~------------~---~~~ 226 (269)
T 4hcu_A 167 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDIST------------G---FRL 226 (269)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHT------------T---CCC
T ss_pred cccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHhc------------C---ccC
Confidence 568889999999999999999999999999999999 9999975321 111111100 0 011
Q ss_pred hchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 598 ~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+..++.++.+++.+||+.||++|||+.|+
T Consensus 227 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 257 (269)
T 4hcu_A 227 YKPRLASTHVYQIMNHCWRERPEDRPAFSRL 257 (269)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 1222345679999999999999999998763
No 173
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.7e-26 Score=231.81 Aligned_cols=177 Identities=26% Similarity=0.395 Sum_probs=126.9
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
.++|...+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++||||+++++++.+....
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~ 83 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEG 83 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTT
T ss_pred HhHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCC
Confidence 356888899999999999999876 788999998643 3456789999999999999999999876532100
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+.....
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~---- 159 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH---- 159 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc----
Confidence 388877654221
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ........ .
T Consensus 160 -~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~---~~~~~~~~------------~--- 220 (307)
T 2eva_A 160 -MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF---RIMWAVHN------------G--- 220 (307)
T ss_dssp ------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHH---HHHHHHHT------------T---
T ss_pred -cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHH---HHHHHHhc------------C---
Confidence 1234699999999999999999999999999999999999999975322111 11110000 0
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 221 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 254 (307)
T 2eva_A 221 TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEI 254 (307)
T ss_dssp CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0111223456679999999999999999998763
No 174
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.93 E-value=6.2e-27 Score=241.25 Aligned_cols=183 Identities=20% Similarity=0.366 Sum_probs=124.7
Q ss_pred hcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
..+|...+.||+|+||.||+|+.. .+..||||+++.. .....+.|.+|++++++++|||||+++++|..++..
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357888999999999999999864 5778999999764 344567799999999999999999999988654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+........
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 203 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA 203 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCcc
Confidence 399999876433211
Q ss_pred -cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 514 -LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 514 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
.......+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... ....... ...
T Consensus 204 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~-----~~~~~~i---------~~~--- 266 (373)
T 2qol_A 204 AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN-----QDVIKAV---------DEG--- 266 (373)
T ss_dssp ----------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH-----HHHHHHH---------HTT---
T ss_pred ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH---------HcC---
Confidence 11122346789999999999999999999999999999998 9999965321 1111110 000
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++||++.||
T Consensus 267 ---~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i 300 (373)
T 2qol_A 267 ---YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQI 300 (373)
T ss_dssp ---EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHH
Confidence 0111233456779999999999999999998763
No 175
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.93 E-value=8.9e-27 Score=244.07 Aligned_cols=193 Identities=20% Similarity=0.233 Sum_probs=132.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCC----C--c-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND----D--F- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~--~- 497 (628)
...|...+.||+|+||.||+|+. .+|+.||||++..... .+.+|++++++++|||||+++++|... + .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 34688889999999999999998 5699999999865322 234799999999999999998876321 0 0
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 498 ---------------------------------------------------------------------KADFGMAKPLL 508 (628)
Q Consensus 498 ---------------------------------------------------------------------~~DFGla~~~~ 508 (628)
.+|||+|+...
T Consensus 129 ~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~ 208 (420)
T 1j1b_A 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV 208 (420)
T ss_dssp EEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcc
Confidence 04999998754
Q ss_pred ccCcccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC--------
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI-------- 579 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~-------- 579 (628)
... .....+||++|+|||++.+. .|+.++||||+||++|||++|++||.+... ...+..++...-..
T Consensus 209 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~ 284 (420)
T 1j1b_A 209 RGE---PNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREM 284 (420)
T ss_dssp TTC---CCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHH
T ss_pred cCC---CceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhh
Confidence 332 12456899999999998765 799999999999999999999999975321 11122222211100
Q ss_pred --ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 580 --SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 580 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
.......+... ........+...+.++++|+.+||+.||++|||+.|
T Consensus 285 ~~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e 333 (420)
T 1j1b_A 285 NPNYTEFKFPQIK-AHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE 333 (420)
T ss_dssp CSCCCCCCCCCCC-CCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred ChhhhhhccCccC-CCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHH
Confidence 00000000000 000001122345678999999999999999999865
No 176
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.93 E-value=2.4e-26 Score=233.47 Aligned_cols=200 Identities=24% Similarity=0.281 Sum_probs=134.9
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||++++++|..++..
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 346788899999999999999987 569999999986532 33456688999999999999999999988654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+++....... .
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~ 180 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--V 180 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc--c
Confidence 39999986543321 2
Q ss_pred cccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC------------ccc
Q 037488 516 QTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI------------SVM 582 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~------------~~~ 582 (628)
.....||++|+|||++.+. .++.++||||+||++|||++|+.||....... ............ ...
T Consensus 181 ~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (331)
T 4aaa_A 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNPVFA 259 (331)
T ss_dssp ---CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCGGGT
T ss_pred cCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhccccc
Confidence 2445799999999999875 68999999999999999999999997532211 111111110000 000
Q ss_pred eeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 583 KVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+.... ..........++.++.+++.+||+.||++|||+.|+
T Consensus 260 ~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 304 (331)
T 4aaa_A 260 GVRLPEIKE-REPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304 (331)
T ss_dssp TCCCCCCSS-CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred cccCccccc-cchhhhcccchhHHHHHHHHHHhccCcccCCCHHHH
Confidence 000000000 001111223467789999999999999999999875
No 177
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.6e-26 Score=232.44 Aligned_cols=176 Identities=18% Similarity=0.153 Sum_probs=127.4
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~---- 498 (628)
++|+..+.||+|+||+||+|+. .+|+.||||++... .......+.+|+..+.++ +|||||+++++|.++...
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5789999999999999999998 47999999998643 233344556677666665 899999999988654311
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...... ..
T Consensus 137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~---~~ 213 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG---AG 213 (311)
T ss_dssp ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC--------
T ss_pred eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC---CC
Confidence 4999998654332 22
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
....||++|+|||++.+ .++.++|||||||++|||++|..|+.... ....+. . ....
T Consensus 214 ~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~----~~~~~~------------~------~~~~ 270 (311)
T 3p1a_A 214 EVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE----GWQQLR------------Q------GYLP 270 (311)
T ss_dssp -CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH----HHHHHT------------T------TCCC
T ss_pred cccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc----HHHHHh------------c------cCCC
Confidence 44579999999999876 79999999999999999999977654310 111100 0 0011
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 271 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el 302 (311)
T 3p1a_A 271 PEFTAGLSSELRSVLVMMLEPDPKLRATAEAL 302 (311)
T ss_dssp HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred cccccCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 22334567789999999999999999998763
No 178
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.93 E-value=1.1e-26 Score=228.66 Aligned_cols=181 Identities=23% Similarity=0.321 Sum_probs=136.4
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
.++|...+.||+|+||.||+|+..++..||||+++.... ..+.+.+|++++++++||||+++++++.++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 467888999999999999999988888999999975432 235688999999999999999999988654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+...... ......
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~~~ 164 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ-YVSSVG 164 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC-EEECCS
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhh-hhcccC
Confidence 3999998654332 122234
Q ss_pred ccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccch
Q 037488 519 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (628)
..||+.|+|||++.+..++.++||||+||++|||+| |+.||...... ........ . ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-----~~~~~~~~------------~---~~~ 224 (268)
T 3sxs_A 165 TKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS-----EVVLKVSQ------------G---HRL 224 (268)
T ss_dssp CCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHT------------T---CCC
T ss_pred CCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH-----HHHHHHHc------------C---CCC
Confidence 557889999999999899999999999999999999 99999653211 11111000 0 001
Q ss_pred hchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 598 ~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+..++.++.+++.+||+.||++|||+.|+
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQL 255 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1122345679999999999999999998763
No 179
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.93 E-value=1.6e-26 Score=229.40 Aligned_cols=182 Identities=17% Similarity=0.227 Sum_probs=133.4
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch------hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR------EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
++|...+.||+|+||.||+|+. .+|+.||||+++.... ...+.+.+|++++++++||||+++++++..++..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 5688899999999999999987 4799999999975321 1356789999999999999999999987654321
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 499 ---------------------------------------------------------------------ADFGMAKPLLK 509 (628)
Q Consensus 499 ---------------------------------------------------------------------~DFGla~~~~~ 509 (628)
+|||+++....
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~ 164 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEA 164 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccC
Confidence 38888876533
Q ss_pred cCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccc
Q 037488 510 EDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHL 589 (628)
Q Consensus 510 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (628)
.. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........
T Consensus 165 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~------------ 224 (283)
T 3bhy_A 165 GN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK-----QETLTNIS------------ 224 (283)
T ss_dssp ----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH------------
T ss_pred CC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch-----HHHHHHhH------------
Confidence 22 12345699999999999999999999999999999999999999965321 11111000
Q ss_pred cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..........+..++.++.+++.+||+.||++|||+.|+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~ 263 (283)
T 3bhy_A 225 AVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQS 263 (283)
T ss_dssp TTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred hcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHH
Confidence 001111122233456779999999999999999998753
No 180
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.7e-26 Score=235.99 Aligned_cols=203 Identities=19% Similarity=0.172 Sum_probs=132.7
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch-----hHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR-----EAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
....++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++...+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 34467899999999999999999997 5699999999975321 11346789999999999999999999876533
Q ss_pred cc------------------------------------------------------------------cccccccccccc
Q 037488 497 FK------------------------------------------------------------------ADFGMAKPLLKE 510 (628)
Q Consensus 497 ~~------------------------------------------------------------------~DFGla~~~~~~ 510 (628)
.. +|||+|+.....
T Consensus 86 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 165 (346)
T 1ua2_A 86 NISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP 165 (346)
T ss_dssp CCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC
T ss_pred ceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC
Confidence 11 499999875433
Q ss_pred CcccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC---cccee--
Q 037488 511 DQSLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI---SVMKV-- 584 (628)
Q Consensus 511 ~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~-- 584 (628)
. ......+||++|+|||++.+. .|+.++||||+||++|||++|++||.+.... ..+.......... .+...
T Consensus 166 ~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~ 242 (346)
T 1ua2_A 166 N--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQWPDMCS 242 (346)
T ss_dssp C--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSSSTTS
T ss_pred c--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhhhhhcc
Confidence 2 223456799999999998764 4899999999999999999999998653221 1122222211110 01000
Q ss_pred -ecccccCCccc--chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 -VDAHLLSQEDK--HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 -~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+.......+. .......++.++.+++.+||+.||++|||+.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 289 (346)
T 1ua2_A 243 LPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 289 (346)
T ss_dssp STTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHH
T ss_pred CcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 00000000000 001123456789999999999999999998763
No 181
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.93 E-value=1.2e-26 Score=248.15 Aligned_cols=181 Identities=25% Similarity=0.387 Sum_probs=138.5
Q ss_pred hcCCCcccccccCCccEEEEEEec-CCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH-YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..+|...+.||+|+||.||+|.+. +++.||||+++.... ..+.|.+|++++++++|||||+++++|..++..
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 456788899999999999999984 589999999975432 356799999999999999999999998654321
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+...... ....
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~ 376 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-YTAH 376 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-EECC
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCc-eeec
Confidence 4999998754322 2222
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+|+.|+|||++.++.|+.++|||||||++|||+| |+.||...... .....+.. ..
T Consensus 377 ~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~--~~~~~~~~------------------~~ 436 (495)
T 1opk_A 377 AGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEK------------------DY 436 (495)
T ss_dssp TTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT------------------TC
T ss_pred CCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------------CC
Confidence 34457889999999999999999999999999999999 99999764221 11111111 01
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+...+..++.++.+++.+||+.||++|||+.||
T Consensus 437 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el 469 (495)
T 1opk_A 437 RMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469 (495)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 122344567789999999999999999998763
No 182
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.93 E-value=5.2e-26 Score=227.81 Aligned_cols=190 Identities=22% Similarity=0.314 Sum_probs=133.2
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhc--ccCCCcceeeeeccCC--------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKH--IRHRNLIKIISSCSND-------- 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~-------- 495 (628)
.++|...+.||+|+||.||+|+. +|+.||||++.... ...+.+|.+++.. ++||||+++++++...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 56899999999999999999987 58999999996543 2445566666665 7999999998864211
Q ss_pred ---------Cc------------------------------------------------------------ccccccccc
Q 037488 496 ---------DF------------------------------------------------------------KADFGMAKP 506 (628)
Q Consensus 496 ---------~~------------------------------------------------------------~~DFGla~~ 506 (628)
+. .+|||+|+.
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 00 049999976
Q ss_pred ccccCcc--cccccccccccccCccccccC------ccCcccchhhHhHHHHHHhhC----------CCCCCcccCCCcc
Q 037488 507 LLKEDQS--LIQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLIETFTR----------KKPTDEIFSGEMT 568 (628)
Q Consensus 507 ~~~~~~~--~~~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~Gvvl~e~ltg----------~~p~~~~~~~~~~ 568 (628)
....... ......+||+.|+|||++.+. .++.++|||||||++|||+|| +.||....+....
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~ 242 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPS 242 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred cccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcc
Confidence 5433211 112334799999999999876 567899999999999999999 8888765554444
Q ss_pred HHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 569 LKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
................. ........++.++.+++.+||+.||++|||+.||
T Consensus 243 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 293 (301)
T 3q4u_A 243 FEDMRKVVCVDQQRPNI---------PNRWFSDPTLTSLAKLMKECWYQNPSARLTALRI 293 (301)
T ss_dssp HHHHHHHHTTSCCCCCC---------CGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred hhhhhHHHhccCCCCCC---------ChhhccCccHHHHHHHHHHHhhcChhhCCCHHHH
Confidence 43333222111100000 0011223467889999999999999999998764
No 183
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.93 E-value=1e-26 Score=235.95 Aligned_cols=204 Identities=21% Similarity=0.184 Sum_probs=131.4
Q ss_pred HHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 422 LFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 422 l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.....++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++..++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (329)
T 3gbz_A 29 SATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRL 108 (329)
T ss_dssp ---CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEE
T ss_pred cccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEE
Confidence 345567899999999999999999986 679999999997543 22345678999999999999999999987654311
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+|+...
T Consensus 109 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~ 188 (329)
T 3gbz_A 109 HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFG 188 (329)
T ss_dssp EEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC
T ss_pred EEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccC
Confidence 4999988653
Q ss_pred ccCcccccccccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhh-cCC--cccee
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDL-LPI--SVMKV 584 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~-~~~--~~~~~ 584 (628)
... ......+||+.|+|||++.+.. |+.++||||+||++|||++|+.||....... ......... .+. .+...
T Consensus 189 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 265 (329)
T 3gbz_A 189 IPI--RQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDTTWPGV 265 (329)
T ss_dssp -------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTTTSTTG
T ss_pred Ccc--cccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchhhhhhh
Confidence 221 1224457899999999998754 8999999999999999999999997532211 111111111 111 00000
Q ss_pred ec-----cccc--CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VD-----AHLL--SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~-----~~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. .... .........+..++.++.+|+.+||+.||++|||+.|+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 316 (329)
T 3gbz_A 266 TALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA 316 (329)
T ss_dssp GGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 00 0000 00000111222356789999999999999999998763
No 184
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.93 E-value=1.3e-26 Score=236.49 Aligned_cols=173 Identities=17% Similarity=0.154 Sum_probs=134.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++.++||||+++++++.+++..
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46789999999999999999987 579999999997543 23456788999999999999999999887654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~----- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCC-----
Confidence 499999865332
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
..+.+||+.|+|||++.+..|+.++||||+||++|||++|++||..... ....... ....
T Consensus 195 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i------------~~~~--- 254 (350)
T 1rdq_E 195 TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP-----IQIYEKI------------VSGK--- 254 (350)
T ss_dssp BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC---
T ss_pred cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH-----HHHHHHH------------HcCC---
Confidence 2356899999999999999999999999999999999999999965321 1111110 0000
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
...+..++.++.+++.+||+.||++||+
T Consensus 255 -~~~p~~~~~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 255 -VRFPSHFSSDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp -CCCCTTCCHHHHHHHHHHSCSCTTTCTT
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHhccC
Confidence 1122345677999999999999999998
No 185
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.93 E-value=1e-26 Score=235.44 Aligned_cols=183 Identities=23% Similarity=0.335 Sum_probs=128.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcE----EEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGME----VAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
.++|...+.||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|+.++++++||||++++++|..+...
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 93 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQL 93 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceE
Confidence 46789999999999999999986 45554 577766432 233457789999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+........
T Consensus 94 v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~ 173 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp EECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC----------
T ss_pred EEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccc
Confidence 399999876443332
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..|+.++||||+||++|||++ |+.||....... ........
T Consensus 174 ~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~~---------------- 235 (327)
T 3lzb_A 174 YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE--ISSILEKG---------------- 235 (327)
T ss_dssp ------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTT----------------
T ss_pred ccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH--HHHHHHcC----------------
Confidence 23334568899999999999999999999999999999999 999997642221 11111110
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 236 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 269 (327)
T 3lzb_A 236 --ERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269 (327)
T ss_dssp --CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 0112233456679999999999999999998763
No 186
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.93 E-value=8.5e-27 Score=243.91 Aligned_cols=192 Identities=17% Similarity=0.185 Sum_probs=138.8
Q ss_pred hHHHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch---hHHHHHHHHHHHhhcccCCCcceeeeeccC
Q 037488 419 YLELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR---EAFKNFDIECDMMKHIRHRNLIKIISSCSN 494 (628)
Q Consensus 419 ~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 494 (628)
+.+.....++|...+.||+|+||.||+|+. .+++.||+|+++.... .....+.+|+.++..++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344555678999999999999999999997 5689999999975321 223448899999999999999999998765
Q ss_pred CCcc-------------------------------------------------------------------ccccccccc
Q 037488 495 DDFK-------------------------------------------------------------------ADFGMAKPL 507 (628)
Q Consensus 495 ~~~~-------------------------------------------------------------------~DFGla~~~ 507 (628)
++.. +|||+|+..
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~ 225 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhc
Confidence 4321 499999866
Q ss_pred cccCcccccccccccccccCccccc-----cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccc
Q 037488 508 LKEDQSLIQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVM 582 (628)
Q Consensus 508 ~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 582 (628)
..... ......+||++|||||++. ++.|+.++||||+||++|||++|++||.+....+ ........
T Consensus 226 ~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~-~~~~i~~~------- 296 (437)
T 4aw2_A 226 MEDGT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE-TYGKIMNH------- 296 (437)
T ss_dssp CTTSC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTH-------
T ss_pred ccCCC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhH-HHHhhhhc-------
Confidence 44322 2234468999999999987 5679999999999999999999999997532111 11111100
Q ss_pred eeecccccCCcccchhchhhhHHHHHHHhhcccCCCccc--CCCCCC
Q 037488 583 KVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEE--RVNAKE 627 (628)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~--Rpt~~e 627 (628)
...... +.....++.++++|+.+||..+|++ ||+++|
T Consensus 297 -----~~~~~~---p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~e 335 (437)
T 4aw2_A 297 -----KERFQF---PTQVTDVSENAKDLIRRLICSREHRLGQNGIED 335 (437)
T ss_dssp -----HHHCCC---CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHH
T ss_pred -----cccccC---CcccccCCHHHHHHHHHHhcccccccCCCCHHH
Confidence 000000 0111235677999999999999988 998865
No 187
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.93 E-value=1.8e-26 Score=233.64 Aligned_cols=178 Identities=20% Similarity=0.294 Sum_probs=125.5
Q ss_pred hcCCCcccccccCCccEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI----HYGMEVAVKVFDLQY----REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|+++... ......+.+|++++++++|||||++++++..++.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46789999999999999999986 468999999997532 2334567899999999999999999998765432
Q ss_pred c------------------------------------------------------------------ccccccccccccC
Q 037488 498 K------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 498 ~------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
. +|||+|+......
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 1 3999998643322
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....... ...
T Consensus 176 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i------------~~~ 236 (327)
T 3a62_A 176 --TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR-----KKTIDKI------------LKC 236 (327)
T ss_dssp -----CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-----HHHHHHH------------HHT
T ss_pred --ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH-----HHHHHHH------------HhC
Confidence 122456799999999999999999999999999999999999999975321 1111110 000
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
. ...+...+.++.+++.+||+.||++||++.
T Consensus 237 ~----~~~p~~~~~~~~~li~~~L~~dp~~R~~~~ 267 (327)
T 3a62_A 237 K----LNLPPYLTQEARDLLKKLLKRNAASRLGAG 267 (327)
T ss_dssp C----CCCCTTSCHHHHHHHHHHSCSCGGGSTTSS
T ss_pred C----CCCCCCCCHHHHHHHHHHHhcCHhhccCCC
Confidence 0 112234566799999999999999999654
No 188
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.93 E-value=2.6e-26 Score=231.10 Aligned_cols=198 Identities=19% Similarity=0.195 Sum_probs=131.6
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 5788999999999999999997 569999999986532 33456788999999999999999999987654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+....... ...
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~~ 160 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD--YYD 160 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc--ccC
Confidence 39999986543321 224
Q ss_pred cccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc---c------eeecc
Q 037488 518 QTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV---M------KVVDA 587 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~------~~~~~ 587 (628)
..+||++|+|||++.+ ..++.++||||+||++|||++|+.||......+ ............. . .....
T Consensus 161 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (311)
T 4agu_A 161 DEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD--QLYLIRKTLGDLIPRHQQVFSTNQYFSG 238 (311)
T ss_dssp -----GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHHHHTCGGGTT
T ss_pred CCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhccccccccccccccccccc
Confidence 5579999999999876 568999999999999999999999997532211 1111111110000 0 00000
Q ss_pred cccC---CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLS---QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~---~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... ...........++.++.+++.+||+.||++|||++|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 282 (311)
T 4agu_A 239 VKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQL 282 (311)
T ss_dssp CCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHH
T ss_pred CcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHH
Confidence 0000 0000011113456779999999999999999998763
No 189
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.93 E-value=8.2e-27 Score=235.03 Aligned_cols=194 Identities=19% Similarity=0.329 Sum_probs=134.5
Q ss_pred hhhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeecc--chhHHHHHHHHHHHhhccc--CCCcceeeeec
Q 037488 417 LTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIR--HRNLIKIISSC 492 (628)
Q Consensus 417 ~~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~ 492 (628)
+.+..+....++|...+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 3333444556779999999999999999999888999999999753 3345677899999999997 59999999987
Q ss_pred cCCCcc----------------------------------------------------------------cccccccccc
Q 037488 493 SNDDFK----------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 493 ~~~~~~----------------------------------------------------------------~DFGla~~~~ 508 (628)
..++.. +|||+++...
T Consensus 98 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~ 177 (313)
T 3cek_A 98 ITDQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQ 177 (313)
T ss_dssp ECSSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--
T ss_pred ecCCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeecccccccc
Confidence 654321 4999998764
Q ss_pred ccCcccccccccccccccCcccccc-----------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhc
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGRE-----------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLL 577 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~ 577 (628)
............||+.|+|||++.+ ..++.++||||+||++|||++|+.||..............
T Consensus 178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~---- 253 (313)
T 3cek_A 178 PDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAII---- 253 (313)
T ss_dssp ------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH----
T ss_pred CccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH----
Confidence 4332222344579999999999875 4689999999999999999999999975322111111111
Q ss_pred CCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 578 PISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
++.. ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 254 --------~~~~------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 290 (313)
T 3cek_A 254 --------DPNH------EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPEL 290 (313)
T ss_dssp --------CTTS------CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred --------hccc------ccCCcccchHHHHHHHHHHccCCcccCcCHHHH
Confidence 1100 011122335668999999999999999998763
No 190
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.93 E-value=1.6e-26 Score=233.96 Aligned_cols=184 Identities=20% Similarity=0.355 Sum_probs=122.7
Q ss_pred HhhcCCCcccccccCCccEEEEEEec-CCc---EEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRIH-YGM---EVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~~-~~~---~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
...++|...+.||+|+||.||+|+.. ++. .||||+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 34568999999999999999999874 333 7999999754 33456789999999999999999999987643210
Q ss_pred c------------------------------------------------------------------------------c
Q 037488 498 K------------------------------------------------------------------------------A 499 (628)
Q Consensus 498 ~------------------------------------------------------------------------------~ 499 (628)
. +
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~ 179 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA 179 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe
Confidence 0 3
Q ss_pred cccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcC
Q 037488 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLP 578 (628)
Q Consensus 500 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~ 578 (628)
|||+|+...............||+.|+|||++.+..++.++||||+||++|||++ |+.||....... .......
T Consensus 180 Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~--~~~~~~~--- 254 (323)
T 3qup_A 180 DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE--IYNYLIG--- 254 (323)
T ss_dssp CCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHT---
T ss_pred eccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH--HHHHHhc---
Confidence 9999987644332222234458889999999999999999999999999999999 999997532211 1111100
Q ss_pred CccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 579 ISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
. .....+..++.++.+++.+||+.||++|||+.|
T Consensus 255 ------------~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 288 (323)
T 3qup_A 255 ------------G---NRLKQPPECMEEVYDLMYQCWSADPKQRPSFTC 288 (323)
T ss_dssp ------------T---CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred ------------C---CCCCCCCccCHHHHHHHHHHccCChhhCcCHHH
Confidence 0 011123345677999999999999999999765
No 191
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.93 E-value=1.2e-26 Score=245.44 Aligned_cols=182 Identities=24% Similarity=0.368 Sum_probs=132.7
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..++|...+.||+|+||.||+|.+..+..||||+++.... ..+.|.+|++++++++|||||+++++|.++...
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~ 260 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 260 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred ChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhh
Confidence 3456788899999999999999997778899999975432 346789999999999999999999988653211
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+...... .....
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-~~~~~ 339 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQ 339 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC------------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCc-eeccc
Confidence 4999998654321 11223
Q ss_pred cccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...||+.|+|||++.++.++.++|||||||++|||+| |+.||.+....+ ....+.. ..+
T Consensus 340 ~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~--~~~~i~~------------------~~~ 399 (452)
T 1fmk_A 340 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVER------------------GYR 399 (452)
T ss_dssp ---CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH--HHHHHHT------------------TCC
T ss_pred CCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc------------------CCC
Confidence 3458899999999999999999999999999999999 999997532111 1111100 011
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+.+..++.++.+++.+||+.||++|||+++|
T Consensus 400 ~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l 431 (452)
T 1fmk_A 400 MPCPPECPESLHDLMCQCWRKEPEERPTFEYL 431 (452)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 22334567789999999999999999998753
No 192
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.93 E-value=3.5e-26 Score=244.43 Aligned_cols=182 Identities=18% Similarity=0.257 Sum_probs=137.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++|||||++++++...+..
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788899999999999999997 579999999997543 22346788999999999999999998876543211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~ 343 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ 343 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC
Confidence 4999998754332
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
. .....+||+.|||||++.+..|+.++||||+||++|||++|++||...... .....+..... ..
T Consensus 344 ~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~------------~~ 408 (543)
T 3c4z_A 344 T--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVL------------EQ 408 (543)
T ss_dssp C--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHH------------HC
T ss_pred c--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHh------------hc
Confidence 1 224458999999999999999999999999999999999999999764221 11122211110 00
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
....+..++.++.+++.+||+.||++||++.
T Consensus 409 ----~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~ 439 (543)
T 3c4z_A 409 ----AVTYPDKFSPASKDFCEALLQKDPEKRLGFR 439 (543)
T ss_dssp ----CCCCCTTSCHHHHHHHHHHSCSSGGGSCCCB
T ss_pred ----ccCCCcccCHHHHHHHHHhccCCHhHCCCCc
Confidence 0112334567799999999999999999874
No 193
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.93 E-value=3.3e-26 Score=228.40 Aligned_cols=180 Identities=17% Similarity=0.256 Sum_probs=137.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 46788899999999999999997 56899999998754 234456788999999999999999999988664321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+++....... .
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~--~ 171 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE--R 171 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC--C
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc--c
Confidence 39999986543221 2
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......... .
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~------------~---- 230 (294)
T 2rku_A 172 KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIKK------------N---- 230 (294)
T ss_dssp BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHT------------T----
T ss_pred cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhh------------c----
Confidence 2345799999999999998999999999999999999999999965321 111111000 0
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+...+.++.+++.+||+.||++|||+.|+
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 263 (294)
T 2rku_A 231 EYSIPKHINPVAASLIQKMLQTDPTARPTINEL 263 (294)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred cCCCccccCHHHHHHHHHHcccChhhCcCHHHH
Confidence 011222345678999999999999999999875
No 194
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.93 E-value=2.9e-26 Score=233.78 Aligned_cols=178 Identities=17% Similarity=0.198 Sum_probs=135.0
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|.+++..+ +||+|+++++++...+..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 357899999999999999999987 468999999997542 23456688999999988 899999999877653321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~-- 175 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-- 175 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT--
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC--
Confidence 4999998643222
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
....+.+||+.|+|||++.+..|+.++||||+||++|||++|++||..... ....... ....
T Consensus 176 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~i------------~~~~- 237 (353)
T 2i0e_A 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSI------------MEHN- 237 (353)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC-
T ss_pred cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH-----HHHHHHH------------HhCC-
Confidence 123456899999999999999999999999999999999999999965321 1111111 0000
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
...|...+.++.+++.+||+.||++||++
T Consensus 238 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 266 (353)
T 2i0e_A 238 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGC 266 (353)
T ss_dssp ---CCCCTTSCHHHHHHHHHHTCSCTTSCTTC
T ss_pred ---CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11223456779999999999999999976
No 195
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.93 E-value=1.8e-26 Score=228.53 Aligned_cols=179 Identities=20% Similarity=0.270 Sum_probs=133.0
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
+.++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++.++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 456789999999999999999987 568899999996532 22346688999999999999999999988664321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||++.......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~--- 163 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR--- 163 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc---
Confidence 3999886543221
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ........ .
T Consensus 164 -~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~------------~---- 221 (279)
T 3fdn_A 164 -RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTY-----QETYKRIS------------R---- 221 (279)
T ss_dssp -----CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH------------H----
T ss_pred -ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcH-----HHHHHHHH------------h----
Confidence 2345799999999999999999999999999999999999999965211 11111000 0
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 222 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 255 (279)
T 3fdn_A 222 VEFTFPDFVTEGARDLISRLLKHNPSQRPMLREV 255 (279)
T ss_dssp TCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHH
Confidence 0011223345678999999999999999998764
No 196
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.93 E-value=2.8e-26 Score=237.80 Aligned_cols=196 Identities=21% Similarity=0.224 Sum_probs=134.4
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCC------
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD------ 496 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------ 496 (628)
...++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++|||||++++++....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999999987 6799999999865422 2347999999999999999998872210
Q ss_pred --------------------------------cc----------------------------------------------
Q 037488 497 --------------------------------FK---------------------------------------------- 498 (628)
Q Consensus 497 --------------------------------~~---------------------------------------------- 498 (628)
..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~ 159 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS 159 (383)
T ss_dssp ------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00
Q ss_pred ------------------------ccccccccccccCcccccccccccccccCccccccCc-cCcccchhhHhHHHHHHh
Q 037488 499 ------------------------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETF 553 (628)
Q Consensus 499 ------------------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~l 553 (628)
+|||+|+...... .....+||++|+|||++.+.. |+.++||||+||++|||+
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell 236 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELI 236 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHH
Confidence 3999998664332 224567999999999988754 999999999999999999
Q ss_pred hCCCCCCcccCCCccHHHHHHhhcCCc----------cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCC
Q 037488 554 TRKKPTDEIFSGEMTLKHWVNDLLPIS----------VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERV 623 (628)
Q Consensus 554 tg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp 623 (628)
+|++||.+....+ .+...+....... .....-+.. .........+..++.++.+|+.+||+.||++||
T Consensus 237 ~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 237 LGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTL-KAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCC-CCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred hCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCcc-CcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999997532211 1222211111100 000000000 001111223445677899999999999999999
Q ss_pred CCCCC
Q 037488 624 NAKEI 628 (628)
Q Consensus 624 t~~ev 628 (628)
|+.|+
T Consensus 315 t~~e~ 319 (383)
T 3eb0_A 315 NPYEA 319 (383)
T ss_dssp CHHHH
T ss_pred CHHHH
Confidence 98763
No 197
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.92 E-value=2.6e-26 Score=233.24 Aligned_cols=197 Identities=17% Similarity=0.154 Sum_probs=136.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-CCCcceeeeeccCCCc--c---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-HRNLIKIISSCSNDDF--K--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~--~--- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++... .+.+.+|++++++++ ||||+++++++..... .
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46789999999999999999986 679999999997433 356889999999997 9999999998765211 0
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+|+....... ..
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~---~~ 188 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE---YN 188 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---CC
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---cc
Confidence 49999986543322 24
Q ss_pred cccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce-------------
Q 037488 518 QTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK------------- 583 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------- 583 (628)
...||..|+|||++.+ ..++.++||||+||++|||++|+.||.........+..............
T Consensus 189 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (330)
T 3nsz_A 189 VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRF 268 (330)
T ss_dssp SCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHH
T ss_pred cccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccch
Confidence 5679999999999887 66999999999999999999999999543222111211111110000000
Q ss_pred --eecccccCCc--ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 584 --VVDAHLLSQE--DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 584 --~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......... ......+..++.++.+++.+||+.||++|||+.|+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 269 NDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp HHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred hhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 0000000000 00111222357789999999999999999998764
No 198
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.92 E-value=3.2e-26 Score=232.82 Aligned_cols=181 Identities=17% Similarity=0.254 Sum_probs=138.0
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
..++|...+.||+|+||.||+++. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+++..
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 346788899999999999999987 56889999999754 234567789999999999999999999988664321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+++.......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-- 196 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE-- 196 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC--
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc--
Confidence 39999986543221
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~------------~~--- 256 (335)
T 2owb_A 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL-----KETYLRIK------------KN--- 256 (335)
T ss_dssp CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHH------------HT---
T ss_pred cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH-----HHHHHHHh------------cC---
Confidence 22445799999999999999999999999999999999999999965321 11111000 00
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 257 -~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 289 (335)
T 2owb_A 257 -EYSIPKHINPVAASLIQKMLQTDPTARPTINEL 289 (335)
T ss_dssp -CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGG
T ss_pred -CCCCCccCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 011222345668999999999999999999875
No 199
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.92 E-value=5.5e-27 Score=237.48 Aligned_cols=183 Identities=21% Similarity=0.364 Sum_probs=131.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcE----EEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGME----VAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
.++|...+.||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++|||||+++++|.++...
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 91 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQL 91 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEE
Confidence 45788889999999999999986 45554 7777775332 22345678899999999999999999988653321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+........
T Consensus 92 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 171 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQ 171 (325)
T ss_dssp EEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTC
T ss_pred EEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCccccc
Confidence 399999976544333
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||..|+|||++.++.|+.++||||+||++|||+| |+.||...... .........
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~---------------- 233 (325)
T 3kex_A 172 LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLA--EVPDLLEKG---------------- 233 (325)
T ss_dssp CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTT--HHHHHHHTT----------------
T ss_pred ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHH--HHHHHHHcC----------------
Confidence 33345578999999999999999999999999999999999 99999764321 111111110
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 234 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 267 (325)
T 3kex_A 234 --ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267 (325)
T ss_dssp --CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHH
T ss_pred --CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0011122344458899999999999999998763
No 200
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.92 E-value=3.4e-26 Score=230.54 Aligned_cols=184 Identities=20% Similarity=0.335 Sum_probs=137.5
Q ss_pred hcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||++++++|..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 46788889999999999999974 357899999997543 34457789999999999 99999999998753210
Q ss_pred ----------------------------------------c---------------------------------------
Q 037488 498 ----------------------------------------K--------------------------------------- 498 (628)
Q Consensus 498 ----------------------------------------~--------------------------------------- 498 (628)
.
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~ 181 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHG 181 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETT
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCC
Confidence 0
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHW 572 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~ 572 (628)
+|||+++...............||+.|+|||++.+..++.++||||+||++|||+| |+.||....... .....
T Consensus 182 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~ 260 (313)
T 1t46_A 182 RITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS-KFYKM 260 (313)
T ss_dssp TEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH-HHHHH
T ss_pred CCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh-HHHHH
Confidence 39999987654433323344568899999999999999999999999999999999 999997643221 11111
Q ss_pred HHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 573 VNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 261 ~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 298 (313)
T 1t46_A 261 IKEGF------------------RMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQI 298 (313)
T ss_dssp HHHTC------------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred hccCC------------------CCCCcccCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 11110 011123456679999999999999999998763
No 201
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.92 E-value=1.8e-26 Score=227.36 Aligned_cols=179 Identities=25% Similarity=0.367 Sum_probs=125.3
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccch----hHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYR----EAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+.. |+.||||+++.... ...+.+.+|+++++.++||||++++++|..++..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLV 84 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 467888999999999999999975 88999999865322 2346788999999999999999999987543211
Q ss_pred -------------------------------------------------------------------------ccccccc
Q 037488 499 -------------------------------------------------------------------------ADFGMAK 505 (628)
Q Consensus 499 -------------------------------------------------------------------------~DFGla~ 505 (628)
+|||+++
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~ 164 (271)
T 3dtc_A 85 MEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR 164 (271)
T ss_dssp EECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--
T ss_pred EEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccc
Confidence 3777776
Q ss_pred cccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceee
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVV 585 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (628)
...... .....||+.|+|||++.+..++.++||||+||++|||++|+.||....... .......
T Consensus 165 ~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-----~~~~~~~------- 228 (271)
T 3dtc_A 165 EWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-----VAYGVAM------- 228 (271)
T ss_dssp ---------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH-----HHHHHHT-------
T ss_pred cccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-----HHHhhhc-------
Confidence 443221 124569999999999999999999999999999999999999997532111 0000000
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..++.++.+++.+||+.||++|||+.|+
T Consensus 229 -------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 264 (271)
T 3dtc_A 229 -------NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNI 264 (271)
T ss_dssp -------SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 000112233456779999999999999999998763
No 202
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.92 E-value=3.9e-26 Score=237.60 Aligned_cols=199 Identities=15% Similarity=0.187 Sum_probs=140.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.+.|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||++++++...+..
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 45788899999999999999987 569999999997543 23356778999999999999999999887543210
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 499 ----------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 499 ----------------------------------------------------------------------~DFGla~~~~ 508 (628)
+|||+|+...
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~ 167 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELE 167 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECC
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEcc
Confidence 3999998754
Q ss_pred ccCcccccccccccccccCcccccc--------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHH--hhcC
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGRE--------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVN--DLLP 578 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~--~~~~ 578 (628)
... .....+||+.|+|||++.+ ..|+.++|||||||++|||++|+.||............... ...+
T Consensus 168 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p 244 (396)
T 4eut_A 168 DDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKP 244 (396)
T ss_dssp CGG---GSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCC
T ss_pred CCC---ccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCC
Confidence 332 2245679999999999865 56899999999999999999999999754332222221111 1111
Q ss_pred Cccceeeccccc------CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 579 ISVMKVVDAHLL------SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 579 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
......+..... ...+.........+..+.+++.+||+.||++|||++|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e 299 (396)
T 4eut_A 245 SGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQ 299 (396)
T ss_dssp TTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHH
T ss_pred cccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHH
Confidence 111111111000 1111122333567788999999999999999999875
No 203
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.92 E-value=4.5e-26 Score=234.60 Aligned_cols=204 Identities=19% Similarity=0.168 Sum_probs=139.5
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc----
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 497 (628)
...++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.....
T Consensus 24 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 24 DVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 3456899999999999999999987 578999999997533 3445778999999999999999999998754321
Q ss_pred --c---------------------------------------------------------------ccccccccccccCc
Q 037488 498 --K---------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 498 --~---------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
. +|||+|+.......
T Consensus 104 ~~~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~ 183 (364)
T 3qyz_A 104 DVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183 (364)
T ss_dssp CEEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGC
T ss_pred eEEEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCC
Confidence 0 39999986543321
Q ss_pred c-cccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc---ceeec-
Q 037488 513 S-LIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV---MKVVD- 586 (628)
Q Consensus 513 ~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~- 586 (628)
. ......+||++|+|||++.+ ..++.++||||+||++|||++|++||.+....+ .............. ....+
T Consensus 184 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 184 HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHTCCCH
T ss_pred ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhhhh
Confidence 1 11244589999999998765 458999999999999999999999997643221 11111111111000 00000
Q ss_pred -------ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 -------AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 -------~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
................++.++.+++.+||+.||++|||+.|+
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 000000000011223456779999999999999999998763
No 204
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.92 E-value=1.3e-26 Score=233.98 Aligned_cols=200 Identities=16% Similarity=0.154 Sum_probs=130.8
Q ss_pred cCCCcc-cccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-----
Q 037488 427 NGFSEN-NLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 427 ~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~----- 498 (628)
+.|... +.||+|+||.||+|.. .+++.||||+++.......+.+.+|+++++++ +||||+++++++.+++..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 567664 6899999999999986 57999999999765544567789999999985 799999999987543311
Q ss_pred ----------------------------------------------------------------ccccccccccccCc--
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQ-- 512 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~-- 512 (628)
+|||+++.......
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~ 171 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCS 171 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccc
Confidence 38998876532211
Q ss_pred ---ccccccccccccccCcccccc-----CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee
Q 037488 513 ---SLIQTQTLATIGYMAPEYGRE-----GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584 (628)
Q Consensus 513 ---~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (628)
.......+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||......+....... ..+......
T Consensus 172 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~ 249 (316)
T 2ac3_A 172 PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE--ACPACQNML 249 (316)
T ss_dssp ----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC------CCHHHHHHH
T ss_pred cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccc--cchhHHHHH
Confidence 111223469999999999875 5689999999999999999999999976433221000000 000000000
Q ss_pred ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...............+..++.++.+++.+||+.||++|||+.|+
T Consensus 250 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 293 (316)
T 2ac3_A 250 FESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293 (316)
T ss_dssp HHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHH
Confidence 00001111111111223456779999999999999999998763
No 205
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.92 E-value=3.7e-26 Score=229.62 Aligned_cols=184 Identities=20% Similarity=0.240 Sum_probs=125.3
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
..++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++..++..
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 357899999999999999999987 579999999997542 23357789999999999999999999987653321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+++...... ..
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~-~~ 190 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK-LT 190 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-----------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc-cc
Confidence 3999987654322 11
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........ ...
T Consensus 191 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~----------------~~~ 252 (309)
T 2h34_A 191 QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQ----------------AIP 252 (309)
T ss_dssp ------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHS----------------CCC
T ss_pred cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhcc----------------CCC
Confidence 223457999999999999999999999999999999999999999653211 11111100 000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCC-CCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERV-NAKE 627 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp-t~~e 627 (628)
.....+..++.++.+++.+||+.||++|| |+++
T Consensus 253 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~ 286 (309)
T 2h34_A 253 RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGD 286 (309)
T ss_dssp CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHH
T ss_pred CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHH
Confidence 11122334566799999999999999999 6654
No 206
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.92 E-value=3.6e-26 Score=228.25 Aligned_cols=181 Identities=24% Similarity=0.375 Sum_probs=131.1
Q ss_pred CCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--------
Q 037488 428 GFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-------- 498 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-------- 498 (628)
.|.....||+|+||.||+|.. .+++.||||++........+.+.+|+.+++.++||||+++++++...+..
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 455566899999999999987 67899999999876555567789999999999999999999987543211
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+++...... ...
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~--~~~ 180 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN--PCT 180 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-------
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC--Ccc
Confidence 3899887653321 112
Q ss_pred ccccccccccCccccccCc--cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 517 TQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~--~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
....||+.|+|||++.++. ++.++|||||||++|||++|+.||.......... +..... .
T Consensus 181 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~--~~~~~~----------------~ 242 (295)
T 2clq_A 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM--FKVGMF----------------K 242 (295)
T ss_dssp CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH--HHHHHH----------------C
T ss_pred cccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH--Hhhccc----------------c
Confidence 3457999999999997654 8999999999999999999999996532211110 000000 0
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 276 (295)
T 2clq_A 243 VHPEIPESMSAEAKAFILKCFEPDPDKRACANDL 276 (295)
T ss_dssp CCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred ccccccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 0112233456779999999999999999998653
No 207
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.92 E-value=3.3e-26 Score=235.03 Aligned_cols=178 Identities=21% Similarity=0.242 Sum_probs=126.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHH-hhcccCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDM-MKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++... ......+.+|..+ ++.++|||||++++++..++..
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~l 116 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYF 116 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEE
Confidence 46788999999999999999987 568999999997543 2234556777776 5778999999999887654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... .
T Consensus 117 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~--~ 194 (373)
T 2r5t_A 117 VLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--S 194 (373)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC--C
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC--C
Confidence 4999998643322 2
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...+.+||+.|+|||++.+..|+.++||||+||++|||++|+.||..... ....... ....
T Consensus 195 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~-----~~~~~~i------------~~~~-- 255 (373)
T 2r5t_A 195 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNI------------LNKP-- 255 (373)
T ss_dssp CCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH-----HHHHHHH------------HHSC--
T ss_pred ccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHH------------Hhcc--
Confidence 23556899999999999999999999999999999999999999965321 1111111 0000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
...+..++.++.+++.+||+.||++||++.
T Consensus 256 --~~~~~~~~~~~~~li~~lL~~dp~~R~~~~ 285 (373)
T 2r5t_A 256 --LQLKPNITNSARHLLEGLLQKDRTKRLGAK 285 (373)
T ss_dssp --CCCCSSSCHHHHHHHHHHTCSSGGGSTTTT
T ss_pred --cCCCCCCCHHHHHHHHHHcccCHHhCCCCC
Confidence 112234566799999999999999999985
No 208
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.92 E-value=2.5e-26 Score=237.96 Aligned_cols=183 Identities=24% Similarity=0.374 Sum_probs=136.5
Q ss_pred hcCCCcccccccCCccEEEEEEe--------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI--------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHI-RHRNLIKIISSCSND 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 495 (628)
.++|...+.||+|+||.||+|+. ..++.||||+++.. .....+.+.+|+++++++ +|||||+++++|..+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 46788889999999999999985 22467999999754 344567789999999999 999999999987542
Q ss_pred Cc--------------------------------------c---------------------------------------
Q 037488 496 DF--------------------------------------K--------------------------------------- 498 (628)
Q Consensus 496 ~~--------------------------------------~--------------------------------------- 498 (628)
+. .
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 227 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTED 227 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTT
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCC
Confidence 11 0
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHW 572 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~ 572 (628)
+|||+|+...............||+.|+|||++.+..++.++|||||||++|||++ |+.||..... ..+
T Consensus 228 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-----~~~ 302 (382)
T 3tt0_A 228 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----EEL 302 (382)
T ss_dssp CCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----HHH
T ss_pred CcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHH
Confidence 39999987644332223344568999999999999999999999999999999999 9999965321 111
Q ss_pred HHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 573 VNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....... .....+..++.++.+++.+||+.||++|||+.||
T Consensus 303 ~~~~~~~---------------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 343 (382)
T 3tt0_A 303 FKLLKEG---------------HRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQL 343 (382)
T ss_dssp HHHHHTT---------------CCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHcC---------------CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1111000 0111233456779999999999999999998764
No 209
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.92 E-value=2e-26 Score=228.34 Aligned_cols=183 Identities=20% Similarity=0.310 Sum_probs=126.6
Q ss_pred hhcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|... .+..||+|+++.. .....+.+.+|+.++++++||||+++++++.++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~l 92 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 92 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEE
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEE
Confidence 3567888999999999999999863 2567999998653 334456789999999999999999999987553321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+.......
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY- 171 (281)
T ss_dssp EEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC-------------
T ss_pred EEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc-
Confidence 39999986543221
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..++.++||||+||++|||++ |+.||......+ ........
T Consensus 172 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~--~~~~i~~~---------------- 233 (281)
T 1mp8_A 172 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND--VIGRIENG---------------- 233 (281)
T ss_dssp -------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG--HHHHHHTT----------------
T ss_pred cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHH--HHHHHHcC----------------
Confidence 12233457889999999998999999999999999999997 999997543221 11111100
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 234 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 267 (281)
T 1mp8_A 234 --ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 267 (281)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0112233567779999999999999999998763
No 210
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.92 E-value=1.4e-26 Score=235.46 Aligned_cols=181 Identities=20% Similarity=0.270 Sum_probs=131.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF------ 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 497 (628)
.++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++|||||+++++|.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 45788899999999999999997 479999999997543 3345778999999999999999999987522110
Q ss_pred --------------------------------------------------------------------------------
Q 037488 498 -------------------------------------------------------------------------------- 497 (628)
Q Consensus 498 -------------------------------------------------------------------------------- 497 (628)
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence
Q ss_pred ----------------------------------------cccccccccccccCcc----------cccccccccccccC
Q 037488 498 ----------------------------------------KADFGMAKPLLKEDQS----------LIQTQTLATIGYMA 527 (628)
Q Consensus 498 ----------------------------------------~~DFGla~~~~~~~~~----------~~~~~~~gt~~y~a 527 (628)
.+|||+|+........ ......+||+.|+|
T Consensus 165 ~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 0399999876443211 12234579999999
Q ss_pred ccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHH
Q 037488 528 PEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFV 607 (628)
Q Consensus 528 PE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 607 (628)
||++.+..++.++||||+||++|||++|..|+... ....... .... .+..+...++++
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~------------~~~~---~~~~~~~~~~~~ 302 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDV------------RNLK---FPLLFTQKYPQE 302 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHH------------HTTC---CCHHHHHHCHHH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHh------------hccC---CCcccccCChhH
Confidence 99999999999999999999999999998775321 0000000 0000 111223345668
Q ss_pred HHHhhcccCCCcccCCCCCCC
Q 037488 608 FNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 608 ~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+++.+||+.||++|||+.|+
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~ 323 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDI 323 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHH
T ss_pred HHHHHHHccCCCCcCCCHHHH
Confidence 999999999999999998763
No 211
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.92 E-value=3.9e-26 Score=230.19 Aligned_cols=184 Identities=23% Similarity=0.372 Sum_probs=137.6
Q ss_pred hhcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
..++|...+.||+|+||.||+|.. .+++.||||+++.. .....+.+.+|++++++++||||+++++++..++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 100 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGP 100 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCc
Confidence 356788889999999999999975 23588999999754 34456778999999999999999999987643210
Q ss_pred ----------------------------------------------c---------------------------------
Q 037488 498 ----------------------------------------------K--------------------------------- 498 (628)
Q Consensus 498 ----------------------------------------------~--------------------------------- 498 (628)
.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~N 180 (314)
T 2ivs_A 101 LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARN 180 (314)
T ss_dssp CEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred eEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchhe
Confidence 0
Q ss_pred -----------ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCC
Q 037488 499 -----------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGE 566 (628)
Q Consensus 499 -----------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~ 566 (628)
+|||+++...............||+.|+|||++.+..++.++||||+||++|||+| |+.||.......
T Consensus 181 Ili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 260 (314)
T 2ivs_A 181 ILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPER 260 (314)
T ss_dssp EEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred EEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence 39999986644333222344568899999999999999999999999999999999 999997543211
Q ss_pred ccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 567 MTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
........ .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 261 --~~~~~~~~------------------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 302 (314)
T 2ivs_A 261 --LFNLLKTG------------------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADI 302 (314)
T ss_dssp --HHHHHHTT------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --HHHHhhcC------------------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11111110 0112233456779999999999999999998763
No 212
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.92 E-value=3e-26 Score=234.13 Aligned_cols=186 Identities=22% Similarity=0.321 Sum_probs=137.0
Q ss_pred HHhhcCCCcccccccCCccEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCC
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSND 495 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 495 (628)
....++|...+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++||||++++++|..+
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 122 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG 122 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC
Confidence 345678999999999999999999873 35889999997543 34467789999999999999999999986532
Q ss_pred Cc----------------------------------------------c-------------------------------
Q 037488 496 DF----------------------------------------------K------------------------------- 498 (628)
Q Consensus 496 ~~----------------------------------------------~------------------------------- 498 (628)
+. .
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp 202 (343)
T 1luf_A 123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT 202 (343)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence 10 0
Q ss_pred -------------ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccC
Q 037488 499 -------------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFS 564 (628)
Q Consensus 499 -------------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~ 564 (628)
+|||+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 39999986543322222344578999999999999999999999999999999999 9999965321
Q ss_pred CCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 565 GEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......... . ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 283 -----~~~~~~~~~~------------~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~ 326 (343)
T 1luf_A 283 -----EEVIYYVRDG------------N---ILACPENCPLELYNLMRLCWSKLPADRPSFCSI 326 (343)
T ss_dssp -----HHHHHHHHTT------------C---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----HHHHHHHhCC------------C---cCCCCCCCCHHHHHHHHHHcccCcccCCCHHHH
Confidence 1111111000 0 011233456779999999999999999998753
No 213
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.92 E-value=1.8e-26 Score=229.18 Aligned_cols=180 Identities=22% Similarity=0.281 Sum_probs=128.6
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
+.|...+.||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+....
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 5688889999999999999987 578999999997643 23457789999999999999999999987653211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~ 181 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE 181 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-----
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc
Confidence 3999997654322
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
......||+.|+|||++. +.++.++||||+||++|||++|+.||....... .........+ ..
T Consensus 182 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~--~~~~~~~~~~---------~~-- 244 (285)
T 3is5_A 182 ---HSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE--VQQKATYKEP---------NY-- 244 (285)
T ss_dssp --------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHCCC---------CC--
T ss_pred ---cCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHH--HHhhhccCCc---------cc--
Confidence 124557999999999875 568999999999999999999999997532111 1111100000 00
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......++++.+++.+||+.||++|||+.||
T Consensus 245 -----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 245 -----AVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp -----CC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred -----ccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00011235568999999999999999998764
No 214
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.92 E-value=3.8e-26 Score=234.85 Aligned_cols=186 Identities=20% Similarity=0.257 Sum_probs=136.6
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--------hhHHHHHHHHHHHhhcc-cCCCcceeeeec
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--------REAFKNFDIECDMMKHI-RHRNLIKIISSC 492 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 492 (628)
....++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 34457799999999999999999998 579999999986432 12245688999999999 799999999987
Q ss_pred cCCCcc------------------------------------------------------------------cccccccc
Q 037488 493 SNDDFK------------------------------------------------------------------ADFGMAKP 506 (628)
Q Consensus 493 ~~~~~~------------------------------------------------------------------~DFGla~~ 506 (628)
...... +|||+++.
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~ 249 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCH 249 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccc
Confidence 643311 39999987
Q ss_pred ccccCcccccccccccccccCcccccc------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCc
Q 037488 507 LLKEDQSLIQTQTLATIGYMAPEYGRE------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 507 ~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
+.... .....+||+.|+|||++.+ ..|+.++||||+||++|||++|+.||..... ........
T Consensus 250 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~--~~~~~~i~------ 318 (365)
T 2y7j_A 250 LEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ--ILMLRMIM------ 318 (365)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHH------
T ss_pred cCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH--HHHHHHHH------
Confidence 64332 2245679999999999863 3589999999999999999999999965211 11111110
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
........+.+..++.++.+++.+||+.||++|||+.|+
T Consensus 319 ---------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 319 ---------EGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp ---------HTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ---------hCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 011111112223456779999999999999999998763
No 215
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.9e-24 Score=213.09 Aligned_cols=200 Identities=25% Similarity=0.247 Sum_probs=142.0
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 32 LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 32 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
+++++++++++|.++. +|..+. ++++.|+|++|+++++.+..|.++++|+.|+|++|.++.++. ...+++
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-------~~~l~~ 78 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-------DGTLPV 78 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-------CSCCTT
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-------CCCCCc
Confidence 4456666666666664 343332 678888888888888888888888888888888888776532 256777
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecc
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 191 (628)
|++|++++|.++. +|..+..+++|+.|++++|++++..+..|..+++|++|+|+
T Consensus 79 L~~L~Ls~N~l~~--------------------------l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~ 132 (290)
T 1p9a_G 79 LGTLDLSHNQLQS--------------------------LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLK 132 (290)
T ss_dssp CCEEECCSSCCSS--------------------------CCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCc--------------------------CchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECC
Confidence 7777777777652 23345566777777888887776666677777777777777
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCc
Q 037488 192 YNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFT 267 (628)
Q Consensus 192 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~ 267 (628)
+|++.+..+..|..+++|+.|+|++|+++...+..|..+++|+.|+|++|+++.+|..++...+|++|++++|.+.
T Consensus 133 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 133 GNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCcc
Confidence 7777766666667777777777777777766666677777777777777777777777666666666666666554
No 216
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.92 E-value=2.9e-26 Score=236.50 Aligned_cols=197 Identities=19% Similarity=0.164 Sum_probs=134.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46888899999999999999987 57999999999753 233457788999999999999999999987653310
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+.....
T Consensus 121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--- 197 (371)
T 4exu_A 121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197 (371)
T ss_dssp CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---------
T ss_pred eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC---
Confidence 399999864322
Q ss_pred cccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhc-CC-ccceee-----
Q 037488 514 LIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLL-PI-SVMKVV----- 585 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~-~~-~~~~~~----- 585 (628)
....+||++|+|||++.+ ..++.++||||+||++|||++|+.||......+ .+........ +. .....+
T Consensus 198 --~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 274 (371)
T 4exu_A 198 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAA 274 (371)
T ss_dssp ----CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCSCHHH
T ss_pred --cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHHhhhhhh
Confidence 244679999999999887 679999999999999999999999997532111 1111111100 00 000000
Q ss_pred ----cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 ----DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..............+..++.++.+|+.+||+.||++|||+.|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 321 (371)
T 4exu_A 275 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 321 (371)
T ss_dssp HHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred hhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHH
Confidence 0000000000111223457789999999999999999998753
No 217
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.92 E-value=4.2e-26 Score=237.19 Aligned_cols=179 Identities=17% Similarity=0.177 Sum_probs=123.8
Q ss_pred cCCCcc-cccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhc-ccCCCcceeeeeccC----CCc--
Q 037488 427 NGFSEN-NLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKH-IRHRNLIKIISSCSN----DDF-- 497 (628)
Q Consensus 427 ~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~----~~~-- 497 (628)
++|... +.||+|+||+||+|.. .+|+.||||+++.. ..+.+|++++.+ .+||||+++++++.. +..
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 456655 6899999999999987 57999999999632 345678888754 589999999887642 100
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 498 ---------------------------------------------------------------------KADFGMAKPLL 508 (628)
Q Consensus 498 ---------------------------------------------------------------------~~DFGla~~~~ 508 (628)
.+|||+|+...
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~ 215 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 215 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccC
Confidence 04999998653
Q ss_pred ccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCcc--HHHHHHhhcCCccceeec
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT--LKHWVNDLLPISVMKVVD 586 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 586 (628)
... ...+.+||++|+|||++.+..|+.++|||||||++|||++|+.||......... ......
T Consensus 216 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~------------ 280 (400)
T 1nxk_A 216 SHN---SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR------------ 280 (400)
T ss_dssp --------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHH------------
T ss_pred CCC---ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHH------------
Confidence 322 224568999999999999999999999999999999999999999754332211 111111
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+........+..++.++.+|+.+||+.||++|||+.|+
T Consensus 281 ---~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ei 319 (400)
T 1nxk_A 281 ---MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319 (400)
T ss_dssp ---HTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred ---cCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 011111112233467789999999999999999998753
No 218
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=3.3e-26 Score=233.91 Aligned_cols=185 Identities=19% Similarity=0.336 Sum_probs=136.1
Q ss_pred hhcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCC
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDD 496 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 496 (628)
..++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++..++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 457888899999999999999985 246789999997542 33456789999999999 9999999999764321
Q ss_pred c---------------------------------------------c---------------------------------
Q 037488 497 F---------------------------------------------K--------------------------------- 498 (628)
Q Consensus 497 ~---------------------------------------------~--------------------------------- 498 (628)
. .
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 202 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN 202 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence 0 0
Q ss_pred -----------ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCC
Q 037488 499 -----------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGE 566 (628)
Q Consensus 499 -----------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~ 566 (628)
+|||+|+...............||+.|+|||++.++.++.++|||||||++|||+| |+.||.......
T Consensus 203 Ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~ 282 (344)
T 1rjb_A 203 VLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDA 282 (344)
T ss_dssp EEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH
T ss_pred EEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHH
Confidence 39999987654433333344568999999999999999999999999999999998 999997643221
Q ss_pred ccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 567 MTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......... .....+..++.++.+++.+||+.||++|||+.||
T Consensus 283 -~~~~~~~~~------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 325 (344)
T 1rjb_A 283 -NFYKLIQNG------------------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNL 325 (344)
T ss_dssp -HHHHHHHTT------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -HHHHHHhcC------------------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHH
Confidence 111111110 0111223456779999999999999999998763
No 219
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.92 E-value=2.1e-26 Score=246.59 Aligned_cols=181 Identities=18% Similarity=0.249 Sum_probs=136.4
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++|||||++++++.+++..
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 456799999999999999999987 579999999997532 22346688999999999999999999887653311
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+......
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~- 340 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ- 340 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC-
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCc-
Confidence 4999998764332
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.....+||+.|||||++.+..|+.++||||+||++|||++|++||....... .......... ..
T Consensus 341 --~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~------------~~- 404 (576)
T 2acx_A 341 --TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVK------------EV- 404 (576)
T ss_dssp --CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHH------------HC-
T ss_pred --cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhh------------cc-
Confidence 2245689999999999999999999999999999999999999997643211 1111111100 00
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
....+...+.++.+++.+||+.||++||++
T Consensus 405 ---~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~ 434 (576)
T 2acx_A 405 ---PEEYSERFSPQARSLCSQLLCKDPAERLGC 434 (576)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred ---cccCCccCCHHHHHHHHHhccCCHHHcCCC
Confidence 011223456779999999999999999953
No 220
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.92 E-value=5.8e-26 Score=230.94 Aligned_cols=185 Identities=21% Similarity=0.414 Sum_probs=137.5
Q ss_pred hhcCCCcccccccCCccEEEEEEec-CC-----cEEEEEEeeccc-hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCC
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIH-YG-----MEVAVKVFDLQY-REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDD 496 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~-~~-----~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 496 (628)
..++|...+.||+|+||.||+|... ++ +.||+|++.... ....+.+.+|+++++++ +||||++++++|..++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3577888999999999999999863 33 479999997543 34457789999999999 8999999999875432
Q ss_pred cc------------------------------------------------------------------------------
Q 037488 497 FK------------------------------------------------------------------------------ 498 (628)
Q Consensus 497 ~~------------------------------------------------------------------------------ 498 (628)
..
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~ 203 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVA 203 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEE
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeE
Confidence 10
Q ss_pred --ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHh
Q 037488 499 --ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVND 575 (628)
Q Consensus 499 --~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~ 575 (628)
+|||+|+...............||+.|+|||++.+..++.++|||||||++|||+| |+.||.+..... ........
T Consensus 204 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~ 282 (333)
T 2i1m_A 204 KIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS-KFYKLVKD 282 (333)
T ss_dssp EBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH-HHHHHHHH
T ss_pred EECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH-HHHHHHhc
Confidence 39999987644433333344568999999999999999999999999999999999 999997643221 11111111
Q ss_pred hcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 576 LLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 576 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. ....+..++.++.+++.+||+.||++|||+.||
T Consensus 283 ~~------------------~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 317 (333)
T 2i1m_A 283 GY------------------QMAQPAFAPKNIYSIMQACWALEPTHRPTFQQI 317 (333)
T ss_dssp TC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CC------------------CCCCCCCCCHHHHHHHHHHhccChhhCcCHHHH
Confidence 10 011122345679999999999999999998763
No 221
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.92 E-value=2.9e-26 Score=227.50 Aligned_cols=182 Identities=17% Similarity=0.306 Sum_probs=133.2
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..++|...+.||+|+||.||+|...++..||||+++.... ..+.+.+|++++++++||||++++++|.++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 3567888899999999999999988888999999975432 235688999999999999999999988654321
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+++...... .....
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 179 (283)
T 3gen_A 101 MANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-YTSSV 179 (283)
T ss_dssp CTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-HHSTT
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccc-ccccc
Confidence 3999998653321 11223
Q ss_pred cccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...||+.|+|||++.+..++.++||||+||++|||+| |+.||...... ........ . ..
T Consensus 180 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~-----~~~~~~~~---------~------~~ 239 (283)
T 3gen_A 180 GSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS-----ETAEHIAQ---------G------LR 239 (283)
T ss_dssp STTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH-----HHHHHHHT---------T------CC
T ss_pred CCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh-----HHHHHHhc---------c------cC
Confidence 4457889999999998999999999999999999998 99999753211 11111000 0 00
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 271 (283)
T 3gen_A 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKIL 271 (283)
T ss_dssp CCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred CCCCCcCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 11122345679999999999999999998763
No 222
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.92 E-value=5.4e-26 Score=228.14 Aligned_cols=182 Identities=18% Similarity=0.242 Sum_probs=134.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc----hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC--cc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY----REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD--FK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--~~ 498 (628)
.++|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 47899999999999999999997 578999999997542 234567899999999999999999999873221 10
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+++......
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~ 163 (305)
T 2wtk_C 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163 (305)
T ss_dssp EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC
T ss_pred EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccc
Confidence 3999998654332
Q ss_pred cccccccccccccccCccccccCc--cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccc
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGR--VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHL 589 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (628)
.........||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... .........
T Consensus 164 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~------------ 226 (305)
T 2wtk_C 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIG------------ 226 (305)
T ss_dssp SSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHH------------
T ss_pred cccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHh------------
Confidence 222334557999999999987644 4889999999999999999999996521 111111100
Q ss_pred cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 227 ~~----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 261 (305)
T 2wtk_C 227 KG----SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQI 261 (305)
T ss_dssp HC----CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cC----CCCCCCccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 00 011223456679999999999999999998763
No 223
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.92 E-value=2.3e-26 Score=232.70 Aligned_cols=184 Identities=21% Similarity=0.273 Sum_probs=133.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--------hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--------REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
.++|...+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++..++
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 46789999999999999999987 568999999986432 122345889999999999999999999875543
Q ss_pred cc--------------------------------------------------------------------cccccccccc
Q 037488 497 FK--------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 497 ~~--------------------------------------------------------------------~DFGla~~~~ 508 (628)
.. +|||+++...
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 168 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG 168 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECC
T ss_pred eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecc
Confidence 21 3899887653
Q ss_pred ccCcccccccccccccccCccccc---cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceee
Q 037488 509 KEDQSLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVV 585 (628)
Q Consensus 509 ~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (628)
... ......||+.|+|||++. +..++.++||||+||++|||++|+.||....... .+......
T Consensus 169 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~---------- 234 (322)
T 2ycf_A 169 ETS---LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITS---------- 234 (322)
T ss_dssp CCH---HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHH----------
T ss_pred ccc---ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHh----------
Confidence 221 123456999999999974 4678999999999999999999999997543322 22221111
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.........+..++.++.+++.+||+.||++|||+.|+
T Consensus 235 -----~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~ 272 (322)
T 2ycf_A 235 -----GKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272 (322)
T ss_dssp -----TCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred -----CccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHH
Confidence 01111122233456779999999999999999998653
No 224
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.92 E-value=6.9e-26 Score=237.88 Aligned_cols=131 Identities=20% Similarity=0.212 Sum_probs=106.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc------cCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI------RHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 498 (628)
..+|...+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++.+ +|+||+++++++..+...
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 45789999999999999999987 568999999997542 3345677888888887 567999999876532210
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 499 ---------------------------------------------------------------------ADFGMAKPLLK 509 (628)
Q Consensus 499 ---------------------------------------------------------------------~DFGla~~~~~ 509 (628)
+|||+|+....
T Consensus 175 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~ 254 (429)
T 3kvw_A 175 CMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ 254 (429)
T ss_dssp EEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred EEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC
Confidence 49999975432
Q ss_pred cCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcc
Q 037488 510 EDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562 (628)
Q Consensus 510 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~ 562 (628)
. ..+.+||+.|+|||++.+..|+.++|||||||++|||+||++||...
T Consensus 255 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 255 R-----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp C-----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred c-----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 2 23568999999999999999999999999999999999999999753
No 225
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.92 E-value=4.8e-26 Score=229.72 Aligned_cols=187 Identities=20% Similarity=0.324 Sum_probs=138.8
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcc-cCCCcceeeeeccC
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHI-RHRNLIKIISSCSN 494 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 494 (628)
....++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||++++++|..
T Consensus 23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 102 (316)
T 2xir_A 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 102 (316)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEec
Confidence 34567899999999999999999974 357899999997543 33456789999999999 79999999998653
Q ss_pred CCc---------------------------------------c-------------------------------------
Q 037488 495 DDF---------------------------------------K------------------------------------- 498 (628)
Q Consensus 495 ~~~---------------------------------------~------------------------------------- 498 (628)
.+. .
T Consensus 103 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 103 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS 182 (316)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC
Confidence 210 0
Q ss_pred -------ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHH
Q 037488 499 -------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLK 570 (628)
Q Consensus 499 -------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~ 570 (628)
+|||+++...............||+.|+|||++.+..++.++||||+||++|||+| |+.||........ ..
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~-~~ 261 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FC 261 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHH-HH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHH-HH
Confidence 39999986644433333344568999999999999999999999999999999998 9999976432221 11
Q ss_pred HHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 571 HWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....... ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 262 ~~~~~~~------------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 301 (316)
T 2xir_A 262 RRLKEGT------------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSEL 301 (316)
T ss_dssp HHHHHTC------------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhccCc------------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 1111100 011222345679999999999999999998764
No 226
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.92 E-value=1.6e-26 Score=234.65 Aligned_cols=187 Identities=14% Similarity=0.122 Sum_probs=134.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++..++..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 46789999999999999999986 6799999999875432 24578999999999 999999999876543211
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+.......
T Consensus 86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~ 165 (330)
T 2izr_A 86 LLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPET 165 (330)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTT
T ss_pred eCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCC
Confidence 49999987543321
Q ss_pred cc-----ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 513 SL-----IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 513 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
.. .....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+..... ......... ..
T Consensus 166 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~--~~~~~~~i~--------~~ 235 (330)
T 2izr_A 166 KKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADT--LKERYQKIG--------DT 235 (330)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSS--HHHHHHHHH--------HH
T ss_pred CccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccccc--HHHHHHHHH--------hh
Confidence 11 1245679999999999999999999999999999999999999998643222 111111100 00
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... .......++ ++.+++.+||+.||++||++++|
T Consensus 236 ~~~~~---~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l 272 (330)
T 2izr_A 236 KRATP---IEVLCENFP-EMATYLRYVRRLDFFEKPDYDYL 272 (330)
T ss_dssp HHHSC---HHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHH
T ss_pred hccCC---HHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHH
Confidence 00000 000111234 79999999999999999998653
No 227
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.92 E-value=4.6e-26 Score=234.54 Aligned_cols=207 Identities=18% Similarity=0.173 Sum_probs=135.2
Q ss_pred hhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc-----------hhHHHHHHHHHHHhhcccCCCcc
Q 037488 418 TYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY-----------REAFKNFDIECDMMKHIRHRNLI 486 (628)
Q Consensus 418 ~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~niv 486 (628)
...++....++|...+.||+|+||.||+|....|+.||||++.... ....+.+.+|++++++++||||+
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 3456777889999999999999999999998779999999985421 12246789999999999999999
Q ss_pred eeeeeccCCC-----cc---------------------------------------------------------------
Q 037488 487 KIISSCSNDD-----FK--------------------------------------------------------------- 498 (628)
Q Consensus 487 ~l~~~~~~~~-----~~--------------------------------------------------------------- 498 (628)
++++++...+ ..
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~ 172 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNND 172 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCC
T ss_pred ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCC
Confidence 9999873211 00
Q ss_pred ---ccccccccccccCcccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHH
Q 037488 499 ---ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVN 574 (628)
Q Consensus 499 ---~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~ 574 (628)
+|||+|+...... ......||++|+|||++.+ ..++.++||||+||++|||++|+.||....... .......
T Consensus 173 ~kl~Dfg~~~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~ 248 (362)
T 3pg1_A 173 ITICDFNLAREDTADA---NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNKIVE 248 (362)
T ss_dssp EEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHH
T ss_pred EEEEecCccccccccc---ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH
Confidence 3999998543322 2244679999999999887 679999999999999999999999997532111 1111111
Q ss_pred hhcCCccc-----------eeecccccCC-cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 575 DLLPISVM-----------KVVDAHLLSQ-EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 575 ~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
........ .......... ...........++.+.+++.+||+.||++|||+.|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 314 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQA 314 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 11000000 0000000000 000111223456779999999999999999998753
No 228
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.92 E-value=2.1e-26 Score=239.27 Aligned_cols=192 Identities=20% Similarity=0.268 Sum_probs=137.5
Q ss_pred hhHHHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeecc
Q 037488 418 TYLELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCS 493 (628)
Q Consensus 418 ~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 493 (628)
.+.+.....++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|..++..++|||||++++++.
T Consensus 52 ~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 131 (412)
T 2vd5_A 52 RLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ 131 (412)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe
Confidence 4445556678999999999999999999987 579999999997532 223455889999999999999999998876
Q ss_pred CCCcc-------------------------------------------------------------------cccccccc
Q 037488 494 NDDFK-------------------------------------------------------------------ADFGMAKP 506 (628)
Q Consensus 494 ~~~~~-------------------------------------------------------------------~DFGla~~ 506 (628)
+++.. +|||+|+.
T Consensus 132 ~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 132 DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 54321 49999987
Q ss_pred ccccCcccccccccccccccCccccc-------cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC
Q 037488 507 LLKEDQSLIQTQTLATIGYMAPEYGR-------EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI 579 (628)
Q Consensus 507 ~~~~~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~ 579 (628)
...... ......+||+.|||||++. ++.|+.++||||+||++|||++|++||......+ .........
T Consensus 212 ~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~-~~~~i~~~~--- 286 (412)
T 2vd5_A 212 LRADGT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE-TYGKIVHYK--- 286 (412)
T ss_dssp CCTTSC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTHH---
T ss_pred ccCCCc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHH-HHHHHHhcc---
Confidence 644322 1223468999999999987 4579999999999999999999999996532111 111111000
Q ss_pred ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCC---CCCC
Q 037488 580 SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERV---NAKE 627 (628)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp---t~~e 627 (628)
... . .+..+..++.++++++.+||. +|++|+ +++|
T Consensus 287 -------~~~--~---~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e 324 (412)
T 2vd5_A 287 -------EHL--S---LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD 324 (412)
T ss_dssp -------HHC--C---CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred -------cCc--C---CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 000 0 001122456779999999999 999985 5543
No 229
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.92 E-value=1.2e-26 Score=245.42 Aligned_cols=175 Identities=19% Similarity=0.237 Sum_probs=123.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++.. .......+.+|+++++.++||||++++++|..++..
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 46789999999999999999987 67999999999753 233446678999999999999999999987543311
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... .
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--~ 304 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--A 304 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC--c
Confidence 4999998643322 2
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....+||++|||||++.+..|+.++||||+||++|||++|+.||..... ....... ....
T Consensus 305 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-----~~~~~~i------------~~~~-- 365 (446)
T 4ejn_A 305 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELI------------LMEE-- 365 (446)
T ss_dssp --CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HHCC--
T ss_pred ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHH------------HhCC--
Confidence 23456899999999999999999999999999999999999999965321 1111110 0000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERV 623 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rp 623 (628)
...+...+.++.+++.+||+.||++||
T Consensus 366 --~~~p~~~~~~~~~li~~~L~~dP~~R~ 392 (446)
T 4ejn_A 366 --IRFPRTLGPEAKSLLSGLLKKDPKQRL 392 (446)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSTTTST
T ss_pred --CCCCccCCHHHHHHHHHHcccCHHHhC
Confidence 112234566799999999999999999
No 230
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.92 E-value=3.7e-26 Score=231.52 Aligned_cols=192 Identities=18% Similarity=0.179 Sum_probs=136.1
Q ss_pred hhhHHHHHhhcCCCcc-cccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcc-cCCCcceeeee
Q 037488 417 LTYLELFQATNGFSEN-NLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHI-RHRNLIKIISS 491 (628)
Q Consensus 417 ~~~~~l~~~~~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 491 (628)
+.+.....-.+.|... +.||+|+||.||+|.. .+|+.||||+++... ......+.+|+.+++.+ +||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3334444455667766 7899999999999987 579999999997543 22356788999999999 56999999998
Q ss_pred ccCCCcc-----------------------------------------------------------------------cc
Q 037488 492 CSNDDFK-----------------------------------------------------------------------AD 500 (628)
Q Consensus 492 ~~~~~~~-----------------------------------------------------------------------~D 500 (628)
+..+... +|
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEee
Confidence 7543211 39
Q ss_pred ccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCc
Q 037488 501 FGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 501 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
||+|+...... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........
T Consensus 178 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~----- 248 (327)
T 3lm5_A 178 FGMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQV----- 248 (327)
T ss_dssp GGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHT-----
T ss_pred CccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhc-----
Confidence 99998654332 1234579999999999999999999999999999999999999996532111 01111000
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
........+..++.++.+++.+||+.||++|||+.|+
T Consensus 249 -----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~l 285 (327)
T 3lm5_A 249 -----------NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEIC 285 (327)
T ss_dssp -----------CCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred -----------ccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0111112223456779999999999999999998753
No 231
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.92 E-value=7.8e-26 Score=227.54 Aligned_cols=184 Identities=22% Similarity=0.262 Sum_probs=124.1
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++... .......+.+|++++++++||||+++++++..++..
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 35788999999999999999987 67999999999742 344567789999999999999999999887543211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+++......
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~ 190 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 190 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC----------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC
Confidence 3999988653322
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.........
T Consensus 191 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~---------- 255 (310)
T 2wqm_A 191 --TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCDY---------- 255 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC---HHHHHHHHHTTCS----------
T ss_pred --ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh---HHHHHHHhhcccC----------
Confidence 1123457999999999999999999999999999999999999999653221 1111111100000
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.||
T Consensus 256 ----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~i 288 (310)
T 2wqm_A 256 ----PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYV 288 (310)
T ss_dssp ----CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ----CCCcccccCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 001112356679999999999999999998763
No 232
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.92 E-value=7.7e-26 Score=224.14 Aligned_cols=183 Identities=22% Similarity=0.323 Sum_probs=133.9
Q ss_pred hhcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|... .+..||||++... .....+.+.+|++++++++||||+++++++.++...
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 89 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWI 89 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEE
Confidence 3567888999999999999999853 2456999999754 334567799999999999999999999987654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+++.......
T Consensus 90 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 168 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY- 168 (281)
T ss_dssp EEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC------
T ss_pred EEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc-
Confidence 39999986543321
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..++.++||||+||++|||+| |+.||...... .........
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~--~~~~~~~~~---------------- 230 (281)
T 3cc6_A 169 YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENK--DVIGVLEKG---------------- 230 (281)
T ss_dssp ----CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGG--GHHHHHHHT----------------
T ss_pred cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChH--HHHHHHhcC----------------
Confidence 12234468899999999998999999999999999999998 99999653221 111111110
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 231 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 264 (281)
T 3cc6_A 231 --DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTEL 264 (281)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHH
Confidence 0011223356679999999999999999998763
No 233
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.92 E-value=8.9e-26 Score=231.30 Aligned_cols=202 Identities=20% Similarity=0.253 Sum_probs=135.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+++++.++||||+++++++.....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46788999999999999999997 679999999986432 2234567899999999999999999998754210
Q ss_pred ---c------------------------------------------------------------------cccccccccc
Q 037488 498 ---K------------------------------------------------------------------ADFGMAKPLL 508 (628)
Q Consensus 498 ---~------------------------------------------------------------------~DFGla~~~~ 508 (628)
. +|||+|+...
T Consensus 96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~ 175 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS 175 (351)
T ss_dssp -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhccccc
Confidence 0 3999998654
Q ss_pred ccC--cccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhh--cCCcc-c
Q 037488 509 KED--QSLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDL--LPISV-M 582 (628)
Q Consensus 509 ~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~--~~~~~-~ 582 (628)
... ........+||++|+|||++.+ ..|+.++||||+||++|||+||++||.+..... ......... .+... .
T Consensus 176 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~ 254 (351)
T 3mi9_A 176 LAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEVWP 254 (351)
T ss_dssp CCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTST
T ss_pred ccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhhcc
Confidence 221 1122345679999999999876 458999999999999999999999997632211 111111111 11110 0
Q ss_pred eeecccccCCc----ccchhch-----hhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 583 KVVDAHLLSQE----DKHFVIK-----GQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 583 ~~~~~~~~~~~----~~~~~~~-----~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..-........ ....... ...++++.+|+.+||+.||++|||+.|+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 309 (351)
T 3mi9_A 255 NVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDA 309 (351)
T ss_dssp TGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHH
Confidence 00000000000 0000000 0124568999999999999999998763
No 234
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=7.1e-24 Score=208.45 Aligned_cols=202 Identities=28% Similarity=0.374 Sum_probs=153.1
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCc
Q 037488 34 NLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLK 113 (628)
Q Consensus 34 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 113 (628)
+.+.+++++|.++. +|..+. ++|+.|+|++|+++++.+.+|.++++|++|++++|.++.+++. .|.++++|+
T Consensus 17 ~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~-----~~~~l~~L~ 88 (270)
T 2o6q_A 17 NKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAG-----IFKELKNLE 88 (270)
T ss_dssp TTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTT-----TTSSCTTCC
T ss_pred CCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChh-----hhcCCCCCC
Confidence 46778888888874 454443 6789999999999988888899999999999999998877543 367788899
Q ss_pred EEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccC
Q 037488 114 YFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYN 193 (628)
Q Consensus 114 ~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 193 (628)
+|++++|.++++.+ ..|..+++|+.|++++|++++..+..|..+++|++|+|++|
T Consensus 89 ~L~l~~n~l~~~~~-------------------------~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 143 (270)
T 2o6q_A 89 TLWVTDNKLQALPI-------------------------GVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYN 143 (270)
T ss_dssp EEECCSSCCCCCCT-------------------------TTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCcCCcCCH-------------------------hHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCC
Confidence 99988888775433 33455667777777777777666666777777888888887
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCC-ccCCCCCcEEEcCCCCCcC
Q 037488 194 QLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST-LLNLKDILYLNLSSNFFTG 268 (628)
Q Consensus 194 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~ 268 (628)
++.+..+..|..+++|++|++++|++++..+..|..+++|+.|++++|+++.+|.. +..+++|++|++++|.+..
T Consensus 144 ~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 144 ELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 77766555677777888888888887776666777788888888888888777654 5567788888888887654
No 235
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.92 E-value=6.3e-26 Score=233.30 Aligned_cols=141 Identities=23% Similarity=0.239 Sum_probs=112.8
Q ss_pred cchhhHHHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-----CCCccee
Q 037488 415 RRLTYLELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-----HRNLIKI 488 (628)
Q Consensus 415 ~~~~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 488 (628)
..+++.+.....++|...+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+++++.++ |||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3445555556678999999999999999999987 67999999999743 234456788999999986 9999999
Q ss_pred eeeccCCCc-----------------------------------------------------------------------
Q 037488 489 ISSCSNDDF----------------------------------------------------------------------- 497 (628)
Q Consensus 489 ~~~~~~~~~----------------------------------------------------------------------- 497 (628)
++++...+.
T Consensus 102 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~ 181 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLIT 181 (360)
T ss_dssp EEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEE
T ss_pred cceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccc
Confidence 987643211
Q ss_pred ---------------------cccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCC
Q 037488 498 ---------------------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRK 556 (628)
Q Consensus 498 ---------------------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~ 556 (628)
.+|||+|+..... ....+||+.|+|||++.+..|+.++||||+||++|||++|+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~ 256 (360)
T 3llt_A 182 VRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGS 256 (360)
T ss_dssp EECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred hhcccccccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCC
Confidence 1378877753221 23467999999999999999999999999999999999999
Q ss_pred CCCCc
Q 037488 557 KPTDE 561 (628)
Q Consensus 557 ~p~~~ 561 (628)
.||..
T Consensus 257 ~pf~~ 261 (360)
T 3llt_A 257 LLFRT 261 (360)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 99975
No 236
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1e-25 Score=224.03 Aligned_cols=183 Identities=19% Similarity=0.352 Sum_probs=135.1
Q ss_pred hcCCCccc-ccccCCccEEEEEEe---cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENN-LIDRGGIGYVYKRRI---HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~-~ig~G~~g~V~~~~~---~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
.++|...+ .||+|+||.||+|.. .+++.||||+++.. .....+.+.+|++++++++||||+++++++..+...
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv 87 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLV 87 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEE
Confidence 34555555 899999999999975 35888999999764 344567789999999999999999999987543211
Q ss_pred ----------------------------------------------------------------ccccccccccccCcc-
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQS- 513 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~- 513 (628)
+|||+++........
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 167 (287)
T 1u59_A 88 MEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYY 167 (287)
T ss_dssp EECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEE
T ss_pred EEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCccee
Confidence 399999876433221
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..++.++||||+||++|||+| |+.||...... .........
T Consensus 168 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~i~~~---------------- 229 (287)
T 1u59_A 168 TARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQG---------------- 229 (287)
T ss_dssp CCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH--HHHHHHHTT----------------
T ss_pred eccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH--HHHHHHhcC----------------
Confidence 11233457899999999998899999999999999999999 99999753221 111111100
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 230 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 263 (287)
T 1u59_A 230 --KRMECPPECPPELYALMSDCWIYKWEDRPDFLTV 263 (287)
T ss_dssp --CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred --CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0112233566789999999999999999998763
No 237
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.92 E-value=3.3e-26 Score=232.03 Aligned_cols=197 Identities=21% Similarity=0.282 Sum_probs=139.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-----cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--c
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-----HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF--K 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~ 498 (628)
.++|...+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+. .
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 46788889999999999999983 4689999999987666667789999999999999999999997753211 0
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+++......
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 181 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK 181 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC
Confidence 3999998754332
Q ss_pred cc-cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC-ccceeecccc
Q 037488 512 QS-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI-SVMKVVDAHL 589 (628)
Q Consensus 512 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 589 (628)
.. .......||..|+|||++.+..++.++||||+||++|||++|+.||...... ........... ......+...
T Consensus 182 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 258 (327)
T 3lxl_A 182 DYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAE---FLRMMGCERDVPALSRLLELLE 258 (327)
T ss_dssp SEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHCC----CCHHHHHHHHHH
T ss_pred ccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccch---hhhhcccccccccHHHHHHHhh
Confidence 21 1223456899999999999999999999999999999999999998642110 00000000000 0000000000
Q ss_pred cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..++.++.+++.+||+.||++|||+.|+
T Consensus 259 ---~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 294 (327)
T 3lxl_A 259 ---EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294 (327)
T ss_dssp ---TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 001122344567889999999999999999998763
No 238
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.92 E-value=6.9e-26 Score=227.14 Aligned_cols=181 Identities=23% Similarity=0.315 Sum_probs=136.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.+.|...+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|+.++++++||||+++++++..+...
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 45688889999999999999986 679999999997543 33457789999999999999999999987543211
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+++...... .....
T Consensus 101 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~ 178 (303)
T 3a7i_A 101 YLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNT 178 (303)
T ss_dssp CCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--CCBCC
T ss_pred eCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--cccCc
Confidence 3999998654332 12245
Q ss_pred ccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchh
Q 037488 519 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFV 598 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 598 (628)
..||+.|+|||++.+..++.++|||||||++|||++|+.||...... .......... ...
T Consensus 179 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~------------------~~~ 238 (303)
T 3a7i_A 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPM--KVLFLIPKNN------------------PPT 238 (303)
T ss_dssp CCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH--HHHHHHHHSC------------------CCC
T ss_pred cCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHH--HHHHHhhcCC------------------CCC
Confidence 67999999999999999999999999999999999999999653211 1111110000 011
Q ss_pred chhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 599 IKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 599 ~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+..++.++.+++.+||+.||++|||+.|+
T Consensus 239 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 268 (303)
T 3a7i_A 239 LEGNYSKPLKEFVEACLNKEPSFRPTAKEL 268 (303)
T ss_dssp CCSSCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CccccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 222345679999999999999999998763
No 239
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.92 E-value=4.7e-26 Score=228.27 Aligned_cols=184 Identities=21% Similarity=0.311 Sum_probs=131.3
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
..+.|+..+.||+|+||.||+|+. .+|+.||+|++........+.+.+|++++++++||||+++++++..++..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 457788999999999999999998 56999999999766555567889999999999999999999987654311
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+++...... ...
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 174 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL--QKR 174 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH--HC-
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccc--ccc
Confidence 3888876432211 112
Q ss_pred ccccccccccCcccc-----ccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 517 TQTLATIGYMAPEYG-----REGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~-----~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
....||+.|+|||++ .+..++.++||||+||++|||++|+.||....... ........
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~---------------- 237 (302)
T 2j7t_A 175 DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKS---------------- 237 (302)
T ss_dssp ----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS----------------
T ss_pred ccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhcc----------------
Confidence 345799999999998 35678999999999999999999999997532111 01111100
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. ......+..++.++.+++.+||+.||++|||+.|+
T Consensus 238 ~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 273 (302)
T 2j7t_A 238 D-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQL 273 (302)
T ss_dssp C-CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred C-CcccCCccccCHHHHHHHHHHcccChhhCCCHHHH
Confidence 0 00011233456779999999999999999998653
No 240
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.92 E-value=1.3e-25 Score=224.50 Aligned_cols=184 Identities=20% Similarity=0.234 Sum_probs=135.6
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---------hhHHHHHHHHHHHhhccc-CCCcceeeeecc
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---------REAFKNFDIECDMMKHIR-HRNLIKIISSCS 493 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 493 (628)
..++|...+.||+|+||.||+|.. .+|+.||||+++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 357889999999999999999987 578999999997532 223467889999999996 999999999886
Q ss_pred CCCcc------------------------------------------------------------------ccccccccc
Q 037488 494 NDDFK------------------------------------------------------------------ADFGMAKPL 507 (628)
Q Consensus 494 ~~~~~------------------------------------------------------------------~DFGla~~~ 507 (628)
.+... +|||+++..
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 174 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhc
Confidence 54321 399999865
Q ss_pred cccCcccccccccccccccCccccc------cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc
Q 037488 508 LKEDQSLIQTQTLATIGYMAPEYGR------EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV 581 (628)
Q Consensus 508 ~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 581 (628)
.... ......||+.|+|||++. ...++.++||||+||++|||++|+.||..... .........
T Consensus 175 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~------ 243 (298)
T 1phk_A 175 DPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ--MLMLRMIMS------ 243 (298)
T ss_dssp CTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH------
T ss_pred CCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH--HHHHHHHhc------
Confidence 4332 224457999999999985 45689999999999999999999999965321 111111100
Q ss_pred ceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 MKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.........+..++.++.+++.+||+.||++|||+.|+
T Consensus 244 ---------~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (298)
T 1phk_A 244 ---------GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEA 281 (298)
T ss_dssp ---------TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ---------CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHH
Confidence 00111111223456779999999999999999998653
No 241
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.92 E-value=8.4e-26 Score=224.25 Aligned_cols=178 Identities=18% Similarity=0.224 Sum_probs=135.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 36788899999999999999987 568899999996532 22246788999999999999999999988654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||++...... .
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~----~ 168 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL----R 168 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS----C
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCccc----c
Confidence 399988754322 1
Q ss_pred cccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 516 QTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......... .
T Consensus 169 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~------------~---- 227 (284)
T 2vgo_A 169 RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH-----TETHRRIVN------------V---- 227 (284)
T ss_dssp BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHT------------T----
T ss_pred cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH-----hHHHHHHhc------------c----
Confidence 2345799999999999999999999999999999999999999965321 111111000 0
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+...+.++.+++.+||+.||++|||+.|+
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l 260 (284)
T 2vgo_A 228 DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGV 260 (284)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHH
Confidence 011223345679999999999999999998753
No 242
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.92 E-value=3.6e-26 Score=246.74 Aligned_cols=182 Identities=24% Similarity=0.361 Sum_probs=137.6
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..++|...+.||+|+||.||+|.+..++.||||+++.... ..+.|.+|++++++++|||||+++++|.++...
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~ 343 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 343 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehh
Confidence 3456788899999999999999997778899999975432 346789999999999999999999988653221
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+++...... .....
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~~~~ 422 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YTARQ 422 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HHTTC
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-eeccc
Confidence 4999998654321 11123
Q ss_pred cccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...+|..|+|||++.++.|+.++|||||||++|||+| |+.||.+.... .....+.. ..+
T Consensus 423 ~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~--~~~~~i~~------------------~~~ 482 (535)
T 2h8h_A 423 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR--EVLDQVER------------------GYR 482 (535)
T ss_dssp STTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH--HHHHHHHT------------------TCC
T ss_pred CCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------------CCC
Confidence 3457899999999999999999999999999999999 99999753211 11111100 011
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.++|.+||+.||++|||+.+|
T Consensus 483 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l 514 (535)
T 2h8h_A 483 MPCPPECPESLHDLMCQCWRKEPEERPTFEYL 514 (535)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 12234567789999999999999999998753
No 243
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.92 E-value=8.3e-26 Score=231.80 Aligned_cols=203 Identities=23% Similarity=0.206 Sum_probs=136.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++..+..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 357899999999999999999987 57999999999653 33445678899999999999999999998764310
Q ss_pred c----------------------------------------------------------------ccccccccccccCcc
Q 037488 498 K----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 498 ~----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
. +|||+|+........
T Consensus 89 ~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (353)
T 2b9h_A 89 VYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168 (353)
T ss_dssp EEEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EEEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence 0 399999865432111
Q ss_pred --------cccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhc-CC--cc
Q 037488 514 --------LIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLL-PI--SV 581 (628)
Q Consensus 514 --------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~-~~--~~ 581 (628)
......+||+.|+|||++.+ ..++.++||||+||++|||++|++||....... .......... +. ..
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 247 (353)
T 2b9h_A 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTPHSDND 247 (353)
T ss_dssp -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCSTTT
T ss_pred ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCchhcc
Confidence 01223579999999998764 679999999999999999999999997532111 1111111100 00 00
Q ss_pred -ceeecc-------ccc-CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 -MKVVDA-------HLL-SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 -~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...... ... .........+..++.++.+++.+||+.||++|||+.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (353)
T 2b9h_A 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEA 303 (353)
T ss_dssp TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 000000 000 00000111223567789999999999999999998763
No 244
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.92 E-value=1.1e-25 Score=224.14 Aligned_cols=183 Identities=20% Similarity=0.201 Sum_probs=121.7
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
..++|+..+.||+|+||.||+|+. .+|+.||||+++... ....+.+.++...++.++||||+++++++..++..
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356789999999999999999987 679999999997542 22334455566668889999999999987654311
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 85 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 164 (290)
T 3fme_A 85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV 164 (290)
T ss_dssp EECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC----------
T ss_pred EehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc
Confidence 3999887654332
Q ss_pred cccccccccccccccCcccc----ccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 512 QSLIQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
......||+.|+|||++ .+..++.++||||+||++|||+||+.||..................
T Consensus 165 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---------- 231 (290)
T 3fme_A 165 ---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS---------- 231 (290)
T ss_dssp --------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC----------
T ss_pred ---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCC----------
Confidence 12334799999999996 5567899999999999999999999999653221111111111100
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 232 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~ 264 (290)
T 3fme_A 232 --------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 264 (290)
T ss_dssp --------CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --------CCcccccCCHHHHHHHHHHhhcChhhCcCHHHH
Confidence 001112346679999999999999999998763
No 245
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.92 E-value=8.9e-26 Score=228.17 Aligned_cols=201 Identities=16% Similarity=0.203 Sum_probs=132.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCC---------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND--------- 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 495 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++........+.+.+|++++++++||||+++++++...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 46789999999999999999997 46999999999876666678899999999999999999999876321
Q ss_pred -----Cc-----------------------------------------------------------------cccccccc
Q 037488 496 -----DF-----------------------------------------------------------------KADFGMAK 505 (628)
Q Consensus 496 -----~~-----------------------------------------------------------------~~DFGla~ 505 (628)
.. .+|||+++
T Consensus 90 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~ 169 (320)
T 2i6l_A 90 SLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169 (320)
T ss_dssp -CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred cccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence 00 03999998
Q ss_pred cccccCc-ccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce
Q 037488 506 PLLKEDQ-SLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK 583 (628)
Q Consensus 506 ~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (628)
....... ........||.+|+|||++.+ ..++.++|||||||++|||++|+.||....... ...... ...+.....
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~-~~~~~~~~~ 247 (320)
T 2i6l_A 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLIL-ESIPVVHEE 247 (320)
T ss_dssp CC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHH-HHSCCCCHH
T ss_pred ccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHH-HhcCCCchh
Confidence 6532211 112234568999999998865 679999999999999999999999997532211 111111 111110000
Q ss_pred -----------eecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 584 -----------VVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 584 -----------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
................+..++.++.+++.+||+.||++|||+.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 303 (320)
T 2i6l_A 248 DRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303 (320)
T ss_dssp HHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred hhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHH
Confidence 000000000000111223467789999999999999999998763
No 246
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.92 E-value=5.2e-26 Score=248.97 Aligned_cols=175 Identities=19% Similarity=0.376 Sum_probs=127.7
Q ss_pred ccccCCccEEEEEEec---CCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----------
Q 037488 434 LIDRGGIGYVYKRRIH---YGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----------- 498 (628)
Q Consensus 434 ~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----------- 498 (628)
.||+|+||.||+|.+. ++..||||+++... ....+.|.+|++++++++|||||+++++|..+...
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 7999999999999763 46789999997643 33567899999999999999999999998653311
Q ss_pred -------------------------------------------------------ccccccccccccCcc-ccccccccc
Q 037488 499 -------------------------------------------------------ADFGMAKPLLKEDQS-LIQTQTLAT 522 (628)
Q Consensus 499 -------------------------------------------------------~DFGla~~~~~~~~~-~~~~~~~gt 522 (628)
+|||+|+........ .......+|
T Consensus 423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~ 502 (613)
T 2ozo_A 423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWP 502 (613)
T ss_dssp HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------C
T ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCCCCc
Confidence 499999876433211 111233467
Q ss_pred ccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchh
Q 037488 523 IGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKG 601 (628)
Q Consensus 523 ~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (628)
+.|+|||++.++.|+.++|||||||++|||+| |+.||...... .....+.. ......+.
T Consensus 503 ~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~------------------~~~~~~p~ 562 (613)
T 2ozo_A 503 LKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP--EVMAFIEQ------------------GKRMECPP 562 (613)
T ss_dssp CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH--HHHHHHHT------------------TCCCCCCT
T ss_pred cceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH--HHHHHHHc------------------CCCCCCCC
Confidence 89999999999999999999999999999998 99999764321 11111110 01122344
Q ss_pred hhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 602 QCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 602 ~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.++.++.++|.+||+.||++|||+.+|
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l 589 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTV 589 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 577889999999999999999998763
No 247
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.92 E-value=1.7e-27 Score=262.19 Aligned_cols=341 Identities=17% Similarity=0.155 Sum_probs=181.3
Q ss_pred CCCCCCEEecCccCC------------CC-CCEEEccCCcc-ee-cCCccccCCCCCCEEeccCCccccc----CccccC
Q 037488 18 NVSTLNSLYLQNVQL------------QN-LEELLLWGNNF-SG-TIPSFIFNASKLSRLELQMNSFYGF----IPNTFG 78 (628)
Q Consensus 18 ~l~~L~~L~l~~n~l------------~~-L~~L~ls~N~l-~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~~~~f~ 78 (628)
++++|++|+|++|.+ ++ |++|+|++|.. +. .++....++++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 788999999988853 24 99999988872 21 1223334788999999999987665 233456
Q ss_pred CCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCccc---ccCCccc
Q 037488 79 NLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNIS---GGIPEEI 155 (628)
Q Consensus 79 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~---~~~~~~~ 155 (628)
++++|+.|++++|.++..... .....+.++++|++|++++|.+.+ +|..+..++ .|+.+.++.+... ...+..+
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~-~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~-~L~~L~l~~~~~~~~~~~~~~~l 266 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPK-DLETIARNCRSLVSVKVGDFEILE-LVGFFKAAA-NLEEFCGGSLNEDIGMPEKYMNL 266 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHH-HHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCT-TCCEEEECBCCCCTTCTTSSSCC
T ss_pred cCCCccEEEeeccCCCccCHH-HHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhh-HHHhhcccccccccchHHHHHHh
Confidence 788899999999888643211 112234578889999999988875 556676664 6777777643222 1222344
Q ss_pred cCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCC-ccccCCCCCCEEEccCCcCcc-cCCCCccC----
Q 037488 156 SNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIP-DDLCRLAALFQLDLGSNKLSG-FVPASFGN---- 229 (628)
Q Consensus 156 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~---- 229 (628)
..+++|+.|+++++.. ..+|..+..+++|++|+|++|.+.+... ..+..+++|+.|+++ +.+.. ..+..+..
T Consensus 267 ~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L 344 (592)
T 3ogk_B 267 VFPRKLCRLGLSYMGP-NEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQL 344 (592)
T ss_dssp CCCTTCCEEEETTCCT-TTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTC
T ss_pred hccccccccCccccch-hHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCC
Confidence 4555555555555432 2344445555555555555555432211 123444555555554 22211 11122233
Q ss_pred --------------------------------CCCCcEEEccCCcCCc-CCCCccC-CCCCcEEEcC----CCCCcCC--
Q 037488 230 --------------------------------LTNLRSLHLGSNQITS-IPSTLLN-LKDILYLNLS----SNFFTGP-- 269 (628)
Q Consensus 230 --------------------------------l~~L~~L~L~~n~l~~-lp~~~~~-l~~L~~L~l~----~n~l~~~-- 269 (628)
+++|+.|+++.|.++. .+..+.. +++|++|+++ .|.+++.
T Consensus 345 ~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~ 424 (592)
T 3ogk_B 345 KRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPL 424 (592)
T ss_dssp CEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCC
T ss_pred CEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchH
Confidence 4444444444444432 1112221 4455555553 3444432
Q ss_pred ---CCCcccCCccccEEEcCCCc--CCCCCccccC-CCCCCCEEeCCCCcCcc-cCChhhcCCCCCCEEECcCCccccc-
Q 037488 270 ---LPLEIGNLKVLIKIDLSMNN--FSGVIPITIG-YLKDLQYLFLEYNRLQG-SIPDSIGDLINLKSLDLSNNNLSGI- 341 (628)
Q Consensus 270 ---~~~~~~~l~~L~~L~Ls~N~--l~~~~p~~~~-~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L~l~~N~l~~~- 341 (628)
++..+.++++|+.|+++++. +++..+..+. .+++|++|++++|++++ .++..+..+++|+.|++++|.+++.
T Consensus 425 ~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 504 (592)
T 3ogk_B 425 DNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERA 504 (592)
T ss_dssp HHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHH
T ss_pred HHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHH
Confidence 11113345555555554322 3322222221 25556666666666543 2233345556666666666665432
Q ss_pred CchhhhcCCCCCEEEccCCcce
Q 037488 342 IPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 342 ~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
++.....+++|+.|++++|+++
T Consensus 505 ~~~~~~~l~~L~~L~ls~n~it 526 (592)
T 3ogk_B 505 IAAAVTKLPSLRYLWVQGYRAS 526 (592)
T ss_dssp HHHHHHHCSSCCEEEEESCBCC
T ss_pred HHHHHHhcCccCeeECcCCcCC
Confidence 2233345566666666666554
No 248
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.92 E-value=7.9e-26 Score=228.80 Aligned_cols=185 Identities=22% Similarity=0.345 Sum_probs=137.7
Q ss_pred HhhcCCCcccccccCCccEEEEEEec------CCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCC
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRIH------YGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDD 496 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 496 (628)
...++|...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 101 (322)
T 1p4o_A 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 101 (322)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS
T ss_pred chhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC
Confidence 44577889999999999999999753 47889999997543 344567899999999999999999999875432
Q ss_pred cc----------------------------------------------------------------------------cc
Q 037488 497 FK----------------------------------------------------------------------------AD 500 (628)
Q Consensus 497 ~~----------------------------------------------------------------------------~D 500 (628)
.. +|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~D 181 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 181 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECC
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECc
Confidence 11 39
Q ss_pred ccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCC
Q 037488 501 FGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPI 579 (628)
Q Consensus 501 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~ 579 (628)
||+++...............||+.|+|||++.+..++.++||||+||++|||++ |+.||..... ..........
T Consensus 182 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~ 256 (322)
T 1p4o_A 182 FGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN-----EQVLRFVMEG 256 (322)
T ss_dssp TTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH-----HHHHHHHHTT
T ss_pred CccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH-----HHHHHHHHcC
Confidence 999986544332222344568999999999999999999999999999999999 8999865321 1111111000
Q ss_pred ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 580 SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 257 --------~-------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~ 290 (322)
T 1p4o_A 257 --------G-------LLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEI 290 (322)
T ss_dssp --------C-------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --------C-------cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 0 011223456779999999999999999998763
No 249
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.92 E-value=7e-26 Score=235.32 Aligned_cols=194 Identities=20% Similarity=0.216 Sum_probs=132.1
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc------c-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF------K- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------~- 498 (628)
..+|...+.||+|+||+||+|+...+..||+|++..... ...+|+++++.++|||||+++++|..... .
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 346888999999999999999986666699999864322 12479999999999999999988732110 0
Q ss_pred ---------------------------------------------------------------------ccccccccccc
Q 037488 499 ---------------------------------------------------------------------ADFGMAKPLLK 509 (628)
Q Consensus 499 ---------------------------------------------------------------------~DFGla~~~~~ 509 (628)
+|||+|+....
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~ 194 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccC
Confidence 49999987643
Q ss_pred cCcccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccc--eeec
Q 037488 510 EDQSLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVM--KVVD 586 (628)
Q Consensus 510 ~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 586 (628)
.. .....+||++|+|||++.+. .|+.++||||+||++|||++|++||.+.... ..+............. ....
T Consensus 195 ~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~ 270 (394)
T 4e7w_A 195 GE---PNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKTMN 270 (394)
T ss_dssp TC---CCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHC
T ss_pred CC---CCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhC
Confidence 32 22456799999999998765 5999999999999999999999999763221 1122222111100000 0000
Q ss_pred cccc-------CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 587 AHLL-------SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 587 ~~~~-------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
+... .........+..+++++.+|+.+||+.||++|||+.|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e 318 (394)
T 4e7w_A 271 PNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIE 318 (394)
T ss_dssp GGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHH
T ss_pred hhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHH
Confidence 0000 0001111123346778999999999999999999865
No 250
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.92 E-value=9e-26 Score=227.41 Aligned_cols=185 Identities=19% Similarity=0.340 Sum_probs=126.8
Q ss_pred HhhcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
...++|...+.||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++||||+++++++...+.
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 110 (313)
T 3brb_A 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS 110 (313)
T ss_dssp CCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC---
T ss_pred cCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc
Confidence 34567888899999999999999763 4568999999754 34446778999999999999999999997643210
Q ss_pred ---------------------------------c--------------------------------------------cc
Q 037488 498 ---------------------------------K--------------------------------------------AD 500 (628)
Q Consensus 498 ---------------------------------~--------------------------------------------~D 500 (628)
. +|
T Consensus 111 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~D 190 (313)
T 3brb_A 111 QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVAD 190 (313)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECS
T ss_pred cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEee
Confidence 0 39
Q ss_pred ccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCC
Q 037488 501 FGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPI 579 (628)
Q Consensus 501 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~ 579 (628)
||+++...............||+.|+|||++.+..++.++|||||||++|||++ |+.||...... ........
T Consensus 191 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~---- 264 (313)
T 3brb_A 191 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNH--EMYDYLLH---- 264 (313)
T ss_dssp CSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHT----
T ss_pred cCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHH--HHHHHHHc----
Confidence 999986543322222234468899999999999999999999999999999999 89998653221 11111110
Q ss_pred ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 580 SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+..++.++.+++.+||+.||++|||+.++
T Consensus 265 -----------~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 299 (313)
T 3brb_A 265 -----------G---HRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVL 299 (313)
T ss_dssp -----------T---CCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred -----------C---CCCCCCccccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 0112233456779999999999999999998753
No 251
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=7e-26 Score=233.12 Aligned_cols=181 Identities=23% Similarity=0.374 Sum_probs=123.2
Q ss_pred CCCcccccccCCccEEEEEEec--C--CcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCC-cc---
Q 037488 428 GFSENNLIDRGGIGYVYKRRIH--Y--GMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD-FK--- 498 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~--~--~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~--- 498 (628)
.|...+.||+|+||.||+|+.. + +..||||.++.. .....+.|.+|+.++++++|||||+++++|...+ ..
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 4566789999999999999862 2 346899998653 3345678999999999999999999999864322 10
Q ss_pred ----------------------------------------------------------------ccccccccccccCcc-
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQS- 513 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~- 513 (628)
+|||+|+........
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 249 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS 249 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-------------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccc
Confidence 399999865332211
Q ss_pred -cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 514 -LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 514 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
.......||+.|+|||++.+..++.++|||||||++|||+| |.+||......+ ........
T Consensus 250 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~--~~~~~~~~--------------- 312 (373)
T 3c1x_A 250 VHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQG--------------- 312 (373)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC--HHHHHHTT---------------
T ss_pred ccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH--HHHHHHcC---------------
Confidence 11233468899999999999999999999999999999999 678886543221 11111110
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 313 ---~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~el 346 (373)
T 3c1x_A 313 ---RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346 (373)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0111233456779999999999999999998763
No 252
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.92 E-value=1.1e-25 Score=223.87 Aligned_cols=183 Identities=24% Similarity=0.365 Sum_probs=139.0
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
...++|...+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|++++++++||||+++++++..++..
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3466788889999999999999997 568999999997543 3456789999999999999999999988654321
Q ss_pred ----------------------------------------------------------------ccccccccccccCccc
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
+|||+|+...... ..
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~ 167 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT-YT 167 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-SE
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc-cc
Confidence 3999998654332 12
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
......||+.|+|||++.+..++.++||||+||++|||++ |+.||...... .........
T Consensus 168 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~--~~~~~~~~~----------------- 228 (288)
T 3kfa_A 168 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS--QVYELLEKD----------------- 228 (288)
T ss_dssp EETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT-----------------
T ss_pred cccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhcc-----------------
Confidence 2334568899999999999999999999999999999999 99999753221 111111110
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 229 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~ 262 (288)
T 3kfa_A 229 -YRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262 (288)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHH
Confidence 0112233456779999999999999999998763
No 253
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.92 E-value=8e-26 Score=222.70 Aligned_cols=176 Identities=19% Similarity=0.304 Sum_probs=128.2
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCC--Ccc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSND--DFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~--- 498 (628)
.++|...+.||+|+||.||+|+.. |+.||||+++... ....+.+.+|++++++++||||++++++|... ...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLI 87 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEee
Confidence 457888999999999999999986 8899999997542 34456799999999999999999999998654 210
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
.|||++..
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~----- 162 (271)
T 3kmu_A 88 THWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFS----- 162 (271)
T ss_dssp EECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT-----
T ss_pred ecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceee-----
Confidence 02222221
Q ss_pred cccccccccccccccCccccccCccCc---ccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVST---NGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
.......||+.|+|||++.+..++. ++||||+||++|||++|+.||........ .......
T Consensus 163 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~-~~~~~~~------------- 226 (271)
T 3kmu_A 163 --FQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEI-GMKVALE------------- 226 (271)
T ss_dssp --TSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHH-HHHHHHS-------------
T ss_pred --ecccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHH-HHHHHhc-------------
Confidence 1113356899999999998766554 89999999999999999999975321110 0000000
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+..++.++.+++.+||+.||++|||+.|+
T Consensus 227 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (271)
T 3kmu_A 227 -----GLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMI 261 (271)
T ss_dssp -----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00112233456779999999999999999998763
No 254
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.92 E-value=2.3e-25 Score=225.92 Aligned_cols=185 Identities=22% Similarity=0.228 Sum_probs=112.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHH-HhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECD-MMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ......+.+|+. +++.++||||+++++++..++..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 46788889999999999999987 579999999997542 333445666665 77888999999999987543211
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+++......
T Consensus 101 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 180 (327)
T 3aln_A 101 ELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI 180 (327)
T ss_dssp CCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC-----
T ss_pred eecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc
Confidence 3999988654322
Q ss_pred cccccccccccccccCcccc----ccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 512 QSLIQTQTLATIGYMAPEYG----REGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
......||+.|+|||++ .+..++.++|||||||++|||++|+.||........ . .......
T Consensus 181 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~----~--------~~~~~~~ 245 (327)
T 3aln_A 181 ---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFD----Q--------LTQVVKG 245 (327)
T ss_dssp ----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------------------CCCCCS
T ss_pred ---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHH----H--------HHHHhcC
Confidence 12334799999999998 456799999999999999999999999975321100 0 0000000
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. .......+..++.++.+++.+||+.||++|||+.|+
T Consensus 246 ~~---~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 283 (327)
T 3aln_A 246 DP---PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKEL 283 (327)
T ss_dssp CC---CCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CC---CCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHH
Confidence 00 000011122456779999999999999999998763
No 255
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.92 E-value=6.6e-26 Score=228.83 Aligned_cols=185 Identities=19% Similarity=0.234 Sum_probs=133.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCC---------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND--------- 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--------- 495 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 46789999999999999999987 67999999999776666677899999999999999999999987521
Q ss_pred --------Cc-------------c--------------------------------------------cccccccccccc
Q 037488 496 --------DF-------------K--------------------------------------------ADFGMAKPLLKE 510 (628)
Q Consensus 496 --------~~-------------~--------------------------------------------~DFGla~~~~~~ 510 (628)
.. . +|||+++.....
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 187 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIH 187 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEE
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccc
Confidence 00 0 389988754321
Q ss_pred Ccc-------cccccccccccccCccccccCc---cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCc
Q 037488 511 DQS-------LIQTQTLATIGYMAPEYGREGR---VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 511 ~~~-------~~~~~~~gt~~y~aPE~~~~~~---~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
... .......||+.|+|||++.+.. ++.++|||||||++|||++|+.||.................
T Consensus 188 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~---- 263 (317)
T 2buj_A 188 VEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ---- 263 (317)
T ss_dssp EESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC----
T ss_pred cccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc----
Confidence 110 0112345899999999987654 79999999999999999999999965322222221111100
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+.+..++.++.+++.+||+.||++|||+.|+
T Consensus 264 --------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 297 (317)
T 2buj_A 264 --------------LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLL 297 (317)
T ss_dssp ----------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --------------CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHH
Confidence 0011122346679999999999999999998753
No 256
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.92 E-value=7.2e-26 Score=230.25 Aligned_cols=183 Identities=24% Similarity=0.394 Sum_probs=134.9
Q ss_pred hcCCCcccccccCCccEEEEEEe--------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI--------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHI-RHRNLIKIISSCSND 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~--------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 495 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|+++++++ +||||++++++|..+
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 46788899999999999999986 24678999999754 334567789999999999 899999999987532
Q ss_pred Cc--------------------------------------c---------------------------------------
Q 037488 496 DF--------------------------------------K--------------------------------------- 498 (628)
Q Consensus 496 ~~--------------------------------------~--------------------------------------- 498 (628)
+. .
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 193 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTEN 193 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTT
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCC
Confidence 10 0
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHW 572 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~ 572 (628)
+|||+++...............||+.|+|||++.+..++.++||||+||++|||++ |+.||.+.... .....
T Consensus 194 ~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~ 271 (334)
T 2pvf_A 194 NVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE--ELFKL 271 (334)
T ss_dssp CCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHH--HHHHH
T ss_pred CCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHH--HHHHH
Confidence 39999986544332222334568899999999998899999999999999999999 99999653211 11111
Q ss_pred HHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 573 VNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.... .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 272 ~~~~------------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 309 (334)
T 2pvf_A 272 LKEG------------------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQL 309 (334)
T ss_dssp HHHT------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcC------------------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 1110 0011233456779999999999999999998763
No 257
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.92 E-value=2.4e-26 Score=237.80 Aligned_cols=172 Identities=12% Similarity=0.078 Sum_probs=126.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc---chhHHHHHHHHH---HHhhcccCCCcceee-------ee
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ---YREAFKNFDIEC---DMMKHIRHRNLIKII-------SS 491 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~---~~l~~l~h~niv~l~-------~~ 491 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 56788899999999999999997 67999999999742 334567789999 566666899999887 32
Q ss_pred ccCCC-------------------c-------------------------------------------------------
Q 037488 492 CSNDD-------------------F------------------------------------------------------- 497 (628)
Q Consensus 492 ~~~~~-------------------~------------------------------------------------------- 497 (628)
+..+. +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD 231 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 231 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence 22110 0
Q ss_pred ---------------cccccccccccccCcccccccccccccccCccccccC-----------ccCcccchhhHhHHHHH
Q 037488 498 ---------------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG-----------RVSTNGDVYSFGIMLIE 551 (628)
Q Consensus 498 ---------------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DVwS~Gvvl~e 551 (628)
.+|||+|+.... .....+| +.|+|||++.+. .|+.++|||||||++||
T Consensus 232 ikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~e 305 (377)
T 3byv_A 232 LRPVDIVLDQRGGVFLTGFEHLVRDGA-----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYW 305 (377)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTC-----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHH
T ss_pred CCHHHEEEcCCCCEEEEechhheecCC-----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHH
Confidence 049999985322 2245578 999999999887 89999999999999999
Q ss_pred HhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 552 TFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 552 ~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
|++|+.||....... ...... ..+..++.++.+++.+||+.||++|||+.|+
T Consensus 306 lltg~~Pf~~~~~~~-----------------~~~~~~--------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 357 (377)
T 3byv_A 306 IWCADLPITKDAALG-----------------GSEWIF--------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQA 357 (377)
T ss_dssp HHHSSCCC------C-----------------CSGGGG--------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHH
T ss_pred HHHCCCCCccccccc-----------------chhhhh--------hhccCCCHHHHHHHHHHcCCCchhCCCHHHH
Confidence 999999996532211 001110 0112346679999999999999999998763
No 258
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.92 E-value=1.2e-25 Score=230.36 Aligned_cols=197 Identities=19% Similarity=0.185 Sum_probs=134.2
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46788999999999999999987 67999999999653 23345678999999999999999999998765321
Q ss_pred --c--------------------------------------------------------------ccccccccccccCcc
Q 037488 498 --K--------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 498 --~--------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
. +|||+++.....
T Consensus 103 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~--- 179 (353)
T 3coi_A 103 DFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 179 (353)
T ss_dssp CCEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-------
T ss_pred eEEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC---
Confidence 0 399998864322
Q ss_pred cccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhh-cCC-ccc-ee-----
Q 037488 514 LIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDL-LPI-SVM-KV----- 584 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~-~~~-~~~-~~----- 584 (628)
....+||++|+|||++.+ ..++.++||||+||++|||++|+.||.+....+ .+....... .+. ... .+
T Consensus 180 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 3coi_A 180 --MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDKAA 256 (353)
T ss_dssp ------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSCHHH
T ss_pred --ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhhHHH
Confidence 234579999999999887 678999999999999999999999997532111 111111110 000 000 00
Q ss_pred ---ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 ---VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...............+..++.++.+++.+||+.||++|||+.|+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~ 303 (353)
T 3coi_A 257 KSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQA 303 (353)
T ss_dssp HHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 00000000000011223457789999999999999999998653
No 259
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.92 E-value=6.7e-26 Score=224.36 Aligned_cols=182 Identities=23% Similarity=0.339 Sum_probs=136.7
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc------
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------ 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------ 498 (628)
..++|...+.||+|+||.||+|+..+++.||||++..... ..+.+.+|++++++++||||+++++++.++...
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~ 89 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence 3467888999999999999999988788999999975432 346789999999999999999999987653311
Q ss_pred -------------------------------------------------------------ccccccccccccCcccccc
Q 037488 499 -------------------------------------------------------------ADFGMAKPLLKEDQSLIQT 517 (628)
Q Consensus 499 -------------------------------------------------------------~DFGla~~~~~~~~~~~~~ 517 (628)
+|||+++...... .....
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~ 168 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE-YTARE 168 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC-EECCT
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcc-ccccc
Confidence 3999998654322 11223
Q ss_pred cccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 518 QTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 518 ~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
...||..|+|||++.++.++.++||||+||++|||++ |+.||.+.... ......... ..
T Consensus 169 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~------------------~~ 228 (279)
T 1qpc_A 169 GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP--EVIQNLERG------------------YR 228 (279)
T ss_dssp TCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT------------------CC
T ss_pred CCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH--HHHHHHhcc------------------cC
Confidence 4467889999999998899999999999999999999 99999653211 111111000 00
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.++
T Consensus 229 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 260 (279)
T 1qpc_A 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260 (279)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCcccccHHHHHHHHHHhccChhhCCCHHHH
Confidence 11223456779999999999999999998653
No 260
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.92 E-value=5.7e-26 Score=230.32 Aligned_cols=183 Identities=22% Similarity=0.345 Sum_probs=131.0
Q ss_pred hcCCCcccccccCCccEEEEEEe------cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI------HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~------~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||++... .......+.+|+.++++++||||+++++++..+...
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788899999999999999984 35778999999643 334456789999999999999999999987643211
Q ss_pred ----------------------------------------------------------------------------cccc
Q 037488 499 ----------------------------------------------------------------------------ADFG 502 (628)
Q Consensus 499 ----------------------------------------------------------------------------~DFG 502 (628)
+|||
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg 188 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFG 188 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCH
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccc
Confidence 3888
Q ss_pred ccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCcc
Q 037488 503 MAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISV 581 (628)
Q Consensus 503 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 581 (628)
+++...............||+.|+|||++.+..++.++|||||||++|||+| |+.||..... ..........
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~----- 261 (327)
T 2yfx_A 189 MARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN--QEVLEFVTSG----- 261 (327)
T ss_dssp HHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHTT-----
T ss_pred cccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH--HHHHHHHhcC-----
Confidence 8875433322222234568999999999999999999999999999999998 9999865321 1111111100
Q ss_pred ceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 MKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 262 -------------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 295 (327)
T 2yfx_A 262 -------------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAII 295 (327)
T ss_dssp -------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -------------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 0011223456679999999999999999998763
No 261
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.92 E-value=1.7e-25 Score=230.19 Aligned_cols=203 Identities=19% Similarity=0.140 Sum_probs=127.4
Q ss_pred HHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--
Q 037488 421 ELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF-- 497 (628)
Q Consensus 421 ~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-- 497 (628)
......++|...+.||+|+||.||+|+. .+|+.||||++.... .....+.+|++.++.++|||||++++++.....
T Consensus 17 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred hchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 4456678999999999999999999987 579999999986432 223456778888999999999999887632100
Q ss_pred -----------------------------------------------------------------------------ccc
Q 037488 498 -----------------------------------------------------------------------------KAD 500 (628)
Q Consensus 498 -----------------------------------------------------------------------------~~D 500 (628)
.+|
T Consensus 96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 039
Q ss_pred ccccccccccCcccccccccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC
Q 037488 501 FGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI 579 (628)
Q Consensus 501 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~ 579 (628)
||+|+...... ......||++|+|||++.+.. ++.++|||||||++|||++|+.||...... .....+.......
T Consensus 176 fg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~ 251 (360)
T 3e3p_A 176 FGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGCP 251 (360)
T ss_dssp CTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCC
T ss_pred CCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCCC
Confidence 99998654332 224567999999999987654 899999999999999999999999763221 1122221111000
Q ss_pred --ccceeecc-----cccCCcc-----cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 580 --SVMKVVDA-----HLLSQED-----KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 580 --~~~~~~~~-----~~~~~~~-----~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......++ ....... .........+.++.+++.+||+.||++|||+.|+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 312 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHH
Confidence 00000000 0000000 0001122357789999999999999999998763
No 262
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.92 E-value=8.3e-26 Score=224.63 Aligned_cols=182 Identities=19% Similarity=0.220 Sum_probs=134.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 100 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEE
Confidence 46799999999999999999987 479999999997542 23456789999999999999999999987653311
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+++......
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~-- 178 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT-- 178 (287)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS--
T ss_pred EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC--
Confidence 3899887653322
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
......||+.|+|||++.+ .++.++||||+||++|||++|+.||...... ........ ...
T Consensus 179 -~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~---------------~~~ 239 (287)
T 2wei_A 179 -KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY--DILKRVET---------------GKY 239 (287)
T ss_dssp -SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHH---------------CCC
T ss_pred -ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHc---------------CCC
Confidence 1234469999999999875 5999999999999999999999999653211 11111100 011
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+.+..++.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 274 (287)
T 2wei_A 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQC 274 (287)
T ss_dssp CCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHH
Confidence 11111223456779999999999999999998753
No 263
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=9.5e-26 Score=221.70 Aligned_cols=181 Identities=23% Similarity=0.328 Sum_probs=135.6
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK------- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~------- 498 (628)
.++|...+.||+|+||.||+|...+++.||+|++..... ..+.+.+|++++++++||||+++++++..++..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 457888899999999999999988888999999975432 235789999999999999999999988654321
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+++...... ......
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~~~~~ 164 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YTSSTG 164 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HHSTTS
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccc-cccccc
Confidence 3999998653321 112234
Q ss_pred ccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccch
Q 037488 519 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHF 597 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 597 (628)
..||..|+|||++.+..++.++||||+||++|||++ |+.||..... ......... . ...
T Consensus 165 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~i~~------------~---~~~ 224 (267)
T 3t9t_A 165 TKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN-----SEVVEDIST------------G---FRL 224 (267)
T ss_dssp TTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHT------------T---CCC
T ss_pred ccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH-----HHHHHHHhc------------C---CcC
Confidence 568889999999998899999999999999999999 8999965321 111111100 0 001
Q ss_pred hchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 598 VIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 598 ~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+..++.++.+++.+||+.||++|||+.|+
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 255 (267)
T 3t9t_A 225 YKPRLASTHVYQIMNHCWRERPEDRPAFSRL 255 (267)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCccCcHHHHHHHHHHccCChhhCcCHHHH
Confidence 1122345679999999999999999998763
No 264
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.92 E-value=4.1e-26 Score=227.14 Aligned_cols=175 Identities=21% Similarity=0.316 Sum_probs=127.0
Q ss_pred hcCCCcccccccCCccEEEEEEec-CC-------cEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH-YG-------MEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~-~~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|+.. ++ +.||+|++........+.+.+|++++++++||||+++++++..++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 467888899999999999999863 33 5799999977666667789999999999999999999998765432
Q ss_pred c---------------------------------------------------------------------------cccc
Q 037488 498 K---------------------------------------------------------------------------ADFG 502 (628)
Q Consensus 498 ~---------------------------------------------------------------------------~DFG 502 (628)
. +|||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg 166 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPG 166 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCc
Confidence 1 2677
Q ss_pred ccccccccCcccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCC-CCCcccCCCccHHHHHHhhcCCc
Q 037488 503 MAKPLLKEDQSLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKK-PTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 503 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~-p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
+++..... ....||+.|+|||++.+ ..++.++||||+||++|||++|.. |+... ... .........
T Consensus 167 ~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~~-~~~~~~~~~---- 234 (289)
T 4fvq_A 167 ISITVLPK------DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DSQ-RKLQFYEDR---- 234 (289)
T ss_dssp SCTTTSCH------HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CHH-HHHHHHHTT----
T ss_pred ccccccCc------cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-chH-HHHHHhhcc----
Confidence 66543211 23458999999999987 679999999999999999999654 44331 111 011111000
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+...+.++.+++.+||+.||++|||+.|+
T Consensus 235 ----------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 266 (289)
T 4fvq_A 235 ----------------HQLPAPKAAELANLINNCMDYEPDHRPSFRAI 266 (289)
T ss_dssp ----------------CCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHH
T ss_pred ----------------CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 00111223448899999999999999998763
No 265
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.92 E-value=1.6e-25 Score=223.93 Aligned_cols=199 Identities=23% Similarity=0.219 Sum_probs=134.0
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|++++++++||||+++++++..++..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 5788999999999999999987 579999999986543 22346788999999999999999999987643311
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+++...... ...
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~~~ 160 (299)
T 2r3i_A 83 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV--RTY 160 (299)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS--BCT
T ss_pred cccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc--ccc
Confidence 3999988653322 122
Q ss_pred ccccccccccCccccccCc-cCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhc-CCc--ccee-----ecc
Q 037488 517 TQTLATIGYMAPEYGREGR-VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLL-PIS--VMKV-----VDA 587 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~-~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~-~~~--~~~~-----~~~ 587 (628)
....||+.|+|||++.+.. ++.++||||+||++|||+||+.||...... ........... +.. +... ..+
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (299)
T 2r3i_A 161 THEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSMPDYKP 239 (299)
T ss_dssp TSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCT
T ss_pred CcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHHHhCCCchhhhhHhhcCcccch
Confidence 3457999999999998765 799999999999999999999999753221 11111221111 000 0000 000
Q ss_pred cccCC-cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQ-EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... ...........+.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~ 281 (299)
T 2r3i_A 240 SFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281 (299)
T ss_dssp TSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred hhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHH
Confidence 00000 000001122356789999999999999999998753
No 266
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.92 E-value=9.8e-26 Score=222.79 Aligned_cols=179 Identities=22% Similarity=0.265 Sum_probs=126.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++.++||||+++++++..++..
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 46789999999999999999997 479999999997543 22356788999999999999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+++...... .
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~ 166 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE---F 166 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC------
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCc---c
Confidence 3999988654322 1
Q ss_pred cccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 516 QTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
.....||+.|+|||++.+..+ +.++||||+||++|||++|+.||.... ......... ...
T Consensus 167 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~------------~~~-- 227 (276)
T 2h6d_A 167 LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIR------------GGV-- 227 (276)
T ss_dssp ----------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHH------------HCC--
T ss_pred eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhh------------cCc--
Confidence 234579999999999988775 689999999999999999999996521 111111100 000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 228 --~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~ 259 (276)
T 2h6d_A 228 --FYIPEYLNRSVATLLMHMLQVDPLKRATIKDI 259 (276)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --ccCchhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 11122345668999999999999999998763
No 267
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.92 E-value=6.7e-26 Score=228.77 Aligned_cols=193 Identities=20% Similarity=0.273 Sum_probs=134.0
Q ss_pred CCcccccccCCccEEEEEEe-----cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--c--
Q 037488 429 FSENNLIDRGGIGYVYKRRI-----HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF--K-- 498 (628)
Q Consensus 429 ~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~-- 498 (628)
|...+.||+|+||.||++.+ .+|+.||||+++... ....+.+.+|++++++++||||+++++++.+.+. .
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 48889999999999998864 268899999997643 3446778999999999999999999998865311 0
Q ss_pred ---------------------------------------------------------------ccccccccccccCcc-c
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQS-L 514 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~-~ 514 (628)
+|||+|+........ .
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~ 192 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 192 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEE
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccc
Confidence 399999876433221 1
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce--eecccccCC
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK--VVDAHLLSQ 592 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 592 (628)
......||..|+|||++.+..++.++||||+||++|||+||+.||....... ..+. ........ .+.....
T Consensus 193 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~-- 265 (318)
T 3lxp_A 193 VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKF---LELI--GIAQGQMTVLRLTELLE-- 265 (318)
T ss_dssp C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH---HHHH--CSCCHHHHHHHHHHHHH--
T ss_pred cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhh---hhhh--cccccchhHHHHHHHHh--
Confidence 2234568999999999999999999999999999999999999986421100 0000 00000000 0000000
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+..++.++.+++.+||+.||++|||+.|+
T Consensus 266 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 301 (318)
T 3lxp_A 266 RGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301 (318)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHH
Confidence 001122344567789999999999999999998763
No 268
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.91 E-value=1.2e-25 Score=224.75 Aligned_cols=186 Identities=11% Similarity=0.044 Sum_probs=136.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++.+ +|+|++++++++..+...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 46799999999999999999986 679999999986432 234578899999999 899999998876543211
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+.......
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~ 166 (298)
T 1csn_A 87 LLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVT 166 (298)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTT
T ss_pred ecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccc
Confidence 49999986643321
Q ss_pred c-----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCcc--HHHHHHhhcCCccceee
Q 037488 513 S-----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT--LKHWVNDLLPISVMKVV 585 (628)
Q Consensus 513 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 585 (628)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||......... .........
T Consensus 167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-------- 238 (298)
T 1csn_A 167 KQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQ-------- 238 (298)
T ss_dssp CCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHH--------
T ss_pred cccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhcc--------
Confidence 1 1224457999999999999999999999999999999999999999764322211 111110000
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .........++.++.+++.+||+.||++|||+++|
T Consensus 239 ----~---~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l 274 (298)
T 1csn_A 239 ----S---TPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYL 274 (298)
T ss_dssp ----H---SCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHH
T ss_pred ----C---ccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHH
Confidence 0 00011222456789999999999999999998753
No 269
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=2.8e-25 Score=222.15 Aligned_cols=182 Identities=21% Similarity=0.341 Sum_probs=130.2
Q ss_pred CCCcccccccCCccEEEEEEe-cC---CcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 428 GFSENNLIDRGGIGYVYKRRI-HY---GMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~-~~---~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.|...+.||+|+||.||+|+. .+ +..||+|++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 345568899999999999985 22 347999999753 334567889999999999999999999988643211
Q ss_pred ----------------------------------------------------------------ccccccccccccCc--
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQ-- 512 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~-- 512 (628)
+|||+|+.......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~ 181 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS 181 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc
Confidence 39999986533221
Q ss_pred ccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 513 SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
........||+.|+|||.+.+..++.++||||+||++|||++|..|+..... ............
T Consensus 182 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~-~~~~~~~~~~~~--------------- 245 (298)
T 3pls_A 182 VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID-PFDLTHFLAQGR--------------- 245 (298)
T ss_dssp SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-GGGHHHHHHTTC---------------
T ss_pred cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC-HHHHHHHhhcCC---------------
Confidence 1122345689999999999999999999999999999999996555432211 111211111100
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 246 ---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 278 (298)
T 3pls_A 246 ---RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL 278 (298)
T ss_dssp ---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCccchHHHHHHHHHHccCChhhCcCHHHH
Confidence 111223456679999999999999999998753
No 270
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.91 E-value=3.8e-26 Score=229.02 Aligned_cols=190 Identities=20% Similarity=0.345 Sum_probs=121.3
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhc--ccCCCcceeeeeccCCC----c--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKH--IRHRNLIKIISSCSNDD----F-- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~----~-- 497 (628)
.++|...+.||+|+||.||+|+.. |+.||||+++... ...+.+|.+++.. ++||||+++++++.... .
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 357899999999999999999875 8899999986432 3456778888887 79999999988764322 0
Q ss_pred -----------------------------------------------------------------------ccccccccc
Q 037488 498 -----------------------------------------------------------------------KADFGMAKP 506 (628)
Q Consensus 498 -----------------------------------------------------------------------~~DFGla~~ 506 (628)
.+|||+|+.
T Consensus 78 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~ 157 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVR 157 (303)
T ss_dssp EEEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CC
T ss_pred EEEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCccee
Confidence 039999876
Q ss_pred ccccCccc--ccccccccccccCccccccC------ccCcccchhhHhHHHHHHhhC----------CCCCCcccCCCcc
Q 037488 507 LLKEDQSL--IQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLIETFTR----------KKPTDEIFSGEMT 568 (628)
Q Consensus 507 ~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~Gvvl~e~ltg----------~~p~~~~~~~~~~ 568 (628)
........ .....+||+.|+|||++.+. .++.++|||||||++|||+|| +.||....+....
T Consensus 158 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3gxj_A 158 HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp EETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCC
T ss_pred ccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCcc
Confidence 54332111 12334799999999999876 566799999999999999999 5555443222111
Q ss_pred HHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 569 LKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+.... .........+.. .....++..+.+++.+||+.||++|||+.||
T Consensus 238 ~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 238 VEEMRKVV--------CEQKLRPNIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp CC-CHHHH--------TTSCCCCCCCGG-GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred HHHHHHHH--------HHhhcCCCcccc-ccchhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 11111100 011111111110 1122567789999999999999999998764
No 271
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.91 E-value=7e-26 Score=233.13 Aligned_cols=194 Identities=14% Similarity=0.093 Sum_probs=133.5
Q ss_pred hhcCCCcccccccCCccEEEEEEecC------CcEEEEEEeeccchhH-----------HHHHHHHHHHhhcccCCCcce
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHY------GMEVAVKVFDLQYREA-----------FKNFDIECDMMKHIRHRNLIK 487 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 487 (628)
..++|...+.||+|+||.||+|.+.. ++.||||++....... ...+.+|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 35689999999999999999998743 4789999986543211 123456777888899999999
Q ss_pred eeeeccCCCc----------------------------------------------------------------------
Q 037488 488 IISSCSNDDF---------------------------------------------------------------------- 497 (628)
Q Consensus 488 l~~~~~~~~~---------------------------------------------------------------------- 497 (628)
+++++.....
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~ 192 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTC
T ss_pred EEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCe
Confidence 9988654210
Q ss_pred --cccccccccccccCcc-----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHH
Q 037488 498 --KADFGMAKPLLKEDQS-----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLK 570 (628)
Q Consensus 498 --~~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~ 570 (628)
.+|||+|+.+...... ......+||+.|||||++.+..++.++|||||||++|||+||+.||.+..... ...
T Consensus 193 ~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~~ 271 (364)
T 3op5_A 193 VYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KYV 271 (364)
T ss_dssp EEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHH
T ss_pred EEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HHH
Confidence 0499999876433211 11133459999999999999999999999999999999999999998643322 111
Q ss_pred HHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 571 HWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 571 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...............++.+ ....++.++.+++.+||+.||++||++.+|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 272 RDSKIRYRENIASLMDKCF---------PAANAPGEIAKYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp HHHHHHHHHCHHHHHHHHS---------CTTCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHhhhhHHHHHHHhc---------ccccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 1111111111111111111 112346779999999999999999998753
No 272
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.91 E-value=9.3e-26 Score=226.09 Aligned_cols=193 Identities=22% Similarity=0.350 Sum_probs=134.4
Q ss_pred cCCCcccccccCCccEEEEEEe-----cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--c
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-----HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF--K 498 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~ 498 (628)
..|...+.||+|+||.||+|++ .+++.||||+++... ....+.+.+|++++++++||||+++++++...+. .
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4477889999999999999983 468999999997543 2345678999999999999999999998765411 0
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 3999998764432
Q ss_pred cc-cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcc----ceeec
Q 037488 512 QS-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISV----MKVVD 586 (628)
Q Consensus 512 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 586 (628)
.. .......||..|+|||++.+..++.++||||+||++|||+||+.|+.... ..+.....+... .....
T Consensus 181 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~ 254 (302)
T 4e5w_A 181 EYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMTVTRLVN 254 (302)
T ss_dssp CEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGHHHHHHH
T ss_pred cceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccCHHHHHH
Confidence 21 22234569999999999999999999999999999999999999864321 111110000000 00000
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
... .......+..++.++.+++.+||+.||++|||+.|+
T Consensus 255 -~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 293 (302)
T 4e5w_A 255 -TLK--EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL 293 (302)
T ss_dssp -HHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHH
T ss_pred -HHh--ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHH
Confidence 000 011122344567789999999999999999998763
No 273
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.91 E-value=4.9e-25 Score=219.42 Aligned_cols=178 Identities=22% Similarity=0.293 Sum_probs=129.7
Q ss_pred CCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcccCCCcceeeeeccCC----Ccc--
Q 037488 428 GFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHIRHRNLIKIISSCSND----DFK-- 498 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~----~~~-- 498 (628)
.|...+.||+|+||.||+|.. .++..||+|++... .....+.+.+|+.++++++||||+++++++... ...
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 366678899999999999987 67889999999754 244567789999999999999999999875421 000
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+.....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~- 185 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS- 185 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-
Confidence 388888643222
Q ss_pred cccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccC
Q 037488 512 QSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLS 591 (628)
Q Consensus 512 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 591 (628)
......||+.|+|||++. +.++.++||||+||++|||++|+.||...... ..........
T Consensus 186 ---~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~----~~~~~~~~~~------------ 245 (290)
T 1t4h_A 186 ---FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNA----AQIYRRVTSG------------ 245 (290)
T ss_dssp ---SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSH----HHHHHHHTTT------------
T ss_pred ---ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcH----HHHHHHHhcc------------
Confidence 123457999999999886 45999999999999999999999999653221 1111111100
Q ss_pred CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 592 QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 592 ~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+...++++.+++.+||+.||++|||+.|+
T Consensus 246 ~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 280 (290)
T 1t4h_A 246 V--KPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280 (290)
T ss_dssp C--CCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred C--CccccCCCCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 0 0111222345679999999999999999998763
No 274
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.91 E-value=2.1e-25 Score=224.80 Aligned_cols=182 Identities=24% Similarity=0.286 Sum_probs=130.7
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
..+.|...+.||+|+||.||+|.. .+|+.||||++.... ..+.+.+|++++++++||||+++++++..+...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 456789999999999999999987 569999999997543 345688999999999999999999987543211
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+++...... ...
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--~~~ 182 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM--AKR 182 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--SCB
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--ccc
Confidence 3999998654322 122
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKH 596 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (628)
....||+.|+|||++.+..++.++||||+||++|||++|+.||....... ........ ....
T Consensus 183 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~----------------~~~~ 244 (314)
T 3com_A 183 NTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTN----------------PPPT 244 (314)
T ss_dssp CCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHS----------------CCCC
T ss_pred CccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcC----------------CCcc
Confidence 44579999999999999999999999999999999999999997532110 00000000 0001
Q ss_pred hhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 597 FVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 597 ~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+..++.++.+++.+||+.||++|||+.|+
T Consensus 245 ~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~l 276 (314)
T 3com_A 245 FRKPELWSDNFTDFVKQCLVKSPEQRATATQL 276 (314)
T ss_dssp CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 11233456679999999999999999998753
No 275
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.91 E-value=1.4e-25 Score=228.70 Aligned_cols=184 Identities=21% Similarity=0.241 Sum_probs=131.0
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHH-hhcccCCCcceeeeeccCCCcc--
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDM-MKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
...++|...+.||+|+||.||+|+. .+|+.||||++.... ......+.+|..+ ++.++||||+++++++..++..
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3456788899999999999999987 679999999997542 2333455566655 7888999999999987653211
Q ss_pred --------------------------------------------------------------------cccccccccccc
Q 037488 499 --------------------------------------------------------------------ADFGMAKPLLKE 510 (628)
Q Consensus 499 --------------------------------------------------------------------~DFGla~~~~~~ 510 (628)
+|||+++.....
T Consensus 128 v~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 128 CMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp EECCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred EHHHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 388888765322
Q ss_pred CcccccccccccccccCcccccc----CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeec
Q 037488 511 DQSLIQTQTLATIGYMAPEYGRE----GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVD 586 (628)
Q Consensus 511 ~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 586 (628)
. ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........+........
T Consensus 208 ~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--------- 275 (340)
T 3an0_A 208 V---AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS--------- 275 (340)
T ss_dssp H---HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCC---------
T ss_pred c---ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCC---------
Confidence 1 1233579999999999643 46899999999999999999999999753211111111111000
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 276 ---------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el 308 (340)
T 3an0_A 276 ---------PQLPADKFSAEFVDFTSQCLKKNSKERPTYPEL 308 (340)
T ss_dssp ---------CCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---------CCCCcccCCHHHHHHHHHHccCCcccCcCHHHH
Confidence 001112356679999999999999999998763
No 276
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.8e-24 Score=211.56 Aligned_cols=161 Identities=30% Similarity=0.341 Sum_probs=76.0
Q ss_pred CCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEE
Q 037488 157 NLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSL 236 (628)
Q Consensus 157 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 236 (628)
.+++|++|++++|.+++..+..+..+++|++|++++|++.+..+..+..+++|++|++++|++++..+..|..+++|+.|
T Consensus 83 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 162 (272)
T 3rfs_A 83 ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTEL 162 (272)
T ss_dssp TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEE
Confidence 44455555555555554444444555555555555555544444444445555555555555544444444444444444
Q ss_pred EccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcc
Q 037488 237 HLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQG 316 (628)
Q Consensus 237 ~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 316 (628)
++++|+++.+| +..+..+++|+.|++++|.+++..+..+..+++|++|++++|++.+
T Consensus 163 ~l~~n~l~~~~-----------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 163 DLSYNQLQSLP-----------------------EGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 219 (272)
T ss_dssp ECCSSCCCCCC-----------------------TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred ECCCCCcCccC-----------------------HHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc
Confidence 44444444443 3333444444444444444444444444444444444444444432
Q ss_pred cCChhhcCCCCCCEEECcCCcccccCchhhh
Q 037488 317 SIPDSIGDLINLKSLDLSNNNLSGIIPISLE 347 (628)
Q Consensus 317 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 347 (628)
. +++|+.|+++.|.++|.+|..+.
T Consensus 220 ~-------~~~l~~l~~~~n~~~g~ip~~~~ 243 (272)
T 3rfs_A 220 T-------CPGIRYLSEWINKHSGVVRNSAG 243 (272)
T ss_dssp C-------TTTTHHHHHHHHHTGGGBBCTTS
T ss_pred c-------CcHHHHHHHHHHhCCCcccCccc
Confidence 2 22344455555555555554443
No 277
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.91 E-value=1.3e-25 Score=246.49 Aligned_cols=176 Identities=21% Similarity=0.364 Sum_probs=128.4
Q ss_pred cccccCCccEEEEEEe---cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc---------
Q 037488 433 NLIDRGGIGYVYKRRI---HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK--------- 498 (628)
Q Consensus 433 ~~ig~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~--------- 498 (628)
+.||+|+||.||+|.+ ..++.||||+++... ....+.+.+|++++++++|||||+++++|..+...
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 4799999999999965 357889999997543 33457899999999999999999999998654321
Q ss_pred --------------------------------------------------------ccccccccccccCcc-cccccccc
Q 037488 499 --------------------------------------------------------ADFGMAKPLLKEDQS-LIQTQTLA 521 (628)
Q Consensus 499 --------------------------------------------------------~DFGla~~~~~~~~~-~~~~~~~g 521 (628)
+|||+|+.+...... .......|
T Consensus 455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~ 534 (635)
T 4fl3_A 455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKW 534 (635)
T ss_dssp EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------------
T ss_pred CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccCCCC
Confidence 499999876433221 12233457
Q ss_pred cccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhch
Q 037488 522 TIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIK 600 (628)
Q Consensus 522 t~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 600 (628)
|+.|+|||++.+..|+.++|||||||++|||++ |+.||.+.... .....+.. ......+
T Consensus 535 t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~--~~~~~i~~------------------~~~~~~p 594 (635)
T 4fl3_A 535 PVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEK------------------GERMGCP 594 (635)
T ss_dssp CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHT------------------TCCCCCC
T ss_pred ceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHc------------------CCCCCCC
Confidence 899999999999999999999999999999998 99999753221 11111110 0012233
Q ss_pred hhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 601 GQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 601 ~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..++.++.+++.+||+.||++|||+.+|
T Consensus 595 ~~~~~~l~~li~~cl~~dP~~RPs~~~l 622 (635)
T 4fl3_A 595 AGCPREMYDLMNLCWTYDVENRPGFAAV 622 (635)
T ss_dssp TTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCHHHHHHHHHHcCCCHhHCcCHHHH
Confidence 4567789999999999999999998763
No 278
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.91 E-value=1.3e-25 Score=230.94 Aligned_cols=132 Identities=20% Similarity=0.327 Sum_probs=108.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK----- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~----- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|++... .....+.+.+|++++++++||||+++++++..++..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 46788999999999999999987 57999999999764 334457789999999999999999999987543311
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+|+..... ..
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----~~ 187 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS----MA 187 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----C-
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc----cc
Confidence 389988754322 12
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDE 561 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~ 561 (628)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..
T Consensus 188 ~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 188 NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp ---CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred cCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 345799999999999999999999999999999999999999975
No 279
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.91 E-value=1.8e-25 Score=221.10 Aligned_cols=175 Identities=24% Similarity=0.351 Sum_probs=126.4
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-c------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF-K------ 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~------ 498 (628)
.++|...+.||+|+||.||+|+.. |+.||||+++... ..+.+.+|++++++++||||+++++++.+.+. .
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 467888899999999999999875 8899999997543 44678999999999999999999998643321 0
Q ss_pred --------------------------------------------------------------ccccccccccccCccccc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKEDQSLIQ 516 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~~~~~~ 516 (628)
+|||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ----- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC-------------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc-----
Confidence 3999887543221
Q ss_pred ccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCccc
Q 037488 517 TQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDK 595 (628)
Q Consensus 517 ~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 595 (628)
....+|+.|+|||++.+..++.++||||+||++|||+| |+.||...... .....+.. ..
T Consensus 172 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~--~~~~~~~~------------------~~ 231 (278)
T 1byg_A 172 DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEK------------------GY 231 (278)
T ss_dssp ----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG--GHHHHHTT------------------TC
T ss_pred cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHhc------------------CC
Confidence 23468899999999998999999999999999999998 99999753221 11111100 00
Q ss_pred chhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 596 HFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 596 ~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....+..++.++.+++.+||+.||++|||+.|+
T Consensus 232 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 232 KMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264 (278)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCcccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 112233456779999999999999999998753
No 280
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.91 E-value=2.2e-25 Score=226.95 Aligned_cols=180 Identities=20% Similarity=0.234 Sum_probs=116.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-CCCcceeeeeccC--------C
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-HRNLIKIISSCSN--------D 495 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~--------~ 495 (628)
..+|...+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.+++++. ||||+++++++.. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 35788889999999999999997 579999999997666666778899999999996 9999999887721 0
Q ss_pred Cc----------------------------------------------------------------------cccccccc
Q 037488 496 DF----------------------------------------------------------------------KADFGMAK 505 (628)
Q Consensus 496 ~~----------------------------------------------------------------------~~DFGla~ 505 (628)
.. .+|||+++
T Consensus 107 ~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 107 AEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred ceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 00 03999998
Q ss_pred cccccCccc----------ccccccccccccCcccc---ccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHH
Q 037488 506 PLLKEDQSL----------IQTQTLATIGYMAPEYG---REGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHW 572 (628)
Q Consensus 506 ~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~ 572 (628)
......... ......||+.|+|||++ .+..++.++|||||||++|||++|+.||....... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-----~ 261 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-----I 261 (337)
T ss_dssp CCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH-----h
Confidence 654322110 11234699999999998 56778999999999999999999999996532110 0
Q ss_pred HHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 573 VNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...... ...+..++..+.+++.+||+.||++|||+.|+
T Consensus 262 ------------~~~~~~------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 299 (337)
T 3ll6_A 262 ------------VNGKYS------IPPHDTQYTVFHSLIRAMLQVNPEERLSIAEV 299 (337)
T ss_dssp ----------------CC------CCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHH
T ss_pred ------------hcCccc------CCcccccchHHHHHHHHHccCChhhCcCHHHH
Confidence 000000 01111223447899999999999999998763
No 281
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.91 E-value=1.1e-25 Score=230.01 Aligned_cols=193 Identities=16% Similarity=0.164 Sum_probs=129.0
Q ss_pred hcCCCcccccccCCccEEEEEEec----CCcEEEEEEeeccchh-----------HHHHHHHHHHHhhcccCCCcceeee
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQYRE-----------AFKNFDIECDMMKHIRHRNLIKIIS 490 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 490 (628)
.++|...+.||+|+||.||+|+.. +++.||||++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 467888999999999999999874 6788999998753211 1234678999999999999999999
Q ss_pred eccC----CCcc-------------------------------------------------------------------c
Q 037488 491 SCSN----DDFK-------------------------------------------------------------------A 499 (628)
Q Consensus 491 ~~~~----~~~~-------------------------------------------------------------------~ 499 (628)
++.. +... +
T Consensus 116 ~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp EEEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred ccccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence 8754 1110 4
Q ss_pred cccccccccccCcc-----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHH
Q 037488 500 DFGMAKPLLKEDQS-----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVN 574 (628)
Q Consensus 500 DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~ 574 (628)
|||+|+.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...............
T Consensus 196 Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~ 275 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKT 275 (345)
T ss_dssp CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHH
T ss_pred eCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHH
Confidence 99999876432211 1123457999999999999999999999999999999999999999653332222211111
Q ss_pred hhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 575 DLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+. . ..... .......++.++.+++.+||+.||++|||+.+|
T Consensus 276 ~~~~~-~----~~~~~-----~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 319 (345)
T 2v62_A 276 NLLDE-L----PQSVL-----KWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQAL 319 (345)
T ss_dssp HHHHT-T----THHHH-----HHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred hhccc-c----cHHHH-----hhccccccHHHHHHHHHHHhhcCcccCCCHHHH
Confidence 11000 0 00000 000011456679999999999999999998763
No 282
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.91 E-value=4.5e-25 Score=220.61 Aligned_cols=183 Identities=23% Similarity=0.363 Sum_probs=130.2
Q ss_pred hcCCCcccccccCCccEEEEEEecC----CcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHY----GMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~----~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
...|...+.||+|+||.||+|.... +..||+|.+... .....+.+.+|++++++++||||++++++|...+..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 103 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 103 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence 3457788999999999999998632 346899998753 344567789999999999999999999986432210
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+|+.......
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 183 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEY 183 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGG
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccch
Confidence 39999986543221
Q ss_pred --ccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccc
Q 037488 513 --SLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHL 589 (628)
Q Consensus 513 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (628)
........||+.|+|||++.+..++.++||||+||++|||++ |.+||....... ........
T Consensus 184 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~--~~~~~~~~------------- 248 (298)
T 3f66_A 184 YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD--ITVYLLQG------------- 248 (298)
T ss_dssp CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTT--HHHHHHTT-------------
T ss_pred hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHH--HHHHHhcC-------------
Confidence 112234568899999999999999999999999999999999 566665432211 11111110
Q ss_pred cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.|+
T Consensus 249 -----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 282 (298)
T 3f66_A 249 -----RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282 (298)
T ss_dssp -----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0011123346679999999999999999998763
No 283
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.91 E-value=2.9e-25 Score=225.01 Aligned_cols=201 Identities=22% Similarity=0.242 Sum_probs=136.4
Q ss_pred HhhcCCCcccccccCCccEEEEEEe--cCCcEEEEEEeeccch--hHHHHHHHHHHHhhcc---cCCCcceeeeecc---
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI--HYGMEVAVKVFDLQYR--EAFKNFDIECDMMKHI---RHRNLIKIISSCS--- 493 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~l~~~~~--- 493 (628)
...++|...+.||+|+||.||+|+. .+|+.||||+++.... .....+.+|+.+++.+ +||||++++++|.
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 8 RADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred CchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 4567899999999999999999987 4688999999975432 2233567788887776 8999999999875
Q ss_pred --CCCcc-------------------------------------------------------------------cccccc
Q 037488 494 --NDDFK-------------------------------------------------------------------ADFGMA 504 (628)
Q Consensus 494 --~~~~~-------------------------------------------------------------------~DFGla 504 (628)
.+... +|||++
T Consensus 88 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~ 167 (326)
T 1blx_A 88 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167 (326)
T ss_dssp CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSC
T ss_pred cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCccc
Confidence 11100 399999
Q ss_pred ccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhc-CC--cc
Q 037488 505 KPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLL-PI--SV 581 (628)
Q Consensus 505 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~-~~--~~ 581 (628)
+...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||...... ........... +. .+
T Consensus 168 ~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~ 243 (326)
T 1blx_A 168 RIYSFQM---ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEEDW 243 (326)
T ss_dssp CCCCGGG---GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCGGGS
T ss_pred ccccCCC---CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHHHcCCCCcccC
Confidence 8654322 224567999999999999999999999999999999999999999753221 11111111110 00 00
Q ss_pred cee---eccccc-CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 582 MKV---VDAHLL-SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 582 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
... ...... .........+..++.++.+++.+||+.||++|||+.|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 294 (326)
T 1blx_A 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSA 294 (326)
T ss_dssp CTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred ccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 000 000000 00001112233567789999999999999999998653
No 284
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.91 E-value=1.8e-25 Score=222.68 Aligned_cols=183 Identities=20% Similarity=0.340 Sum_probs=132.5
Q ss_pred hcCCCccc-ccccCCccEEEEEEe---cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENN-LIDRGGIGYVYKRRI---HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~-~ig~G~~g~V~~~~~---~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
..+|...+ .||+|+||.||+|.+ .+++.||||+++... ....+.+.+|+++++.++||||+++++++..+...
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~l 94 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML 94 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEE
Confidence 45677777 899999999999954 357899999997542 33357789999999999999999999988543211
Q ss_pred ----------------------------------------------------------------ccccccccccccCcc-
Q 037488 499 ----------------------------------------------------------------ADFGMAKPLLKEDQS- 513 (628)
Q Consensus 499 ----------------------------------------------------------------~DFGla~~~~~~~~~- 513 (628)
+|||+++........
T Consensus 95 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 174 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYY 174 (291)
T ss_dssp EEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEE
T ss_pred EEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcc
Confidence 399999876433221
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|+|||++.+..++.++||||+||++|||++ |+.||...... .........
T Consensus 175 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~---------------- 236 (291)
T 1xbb_A 175 KAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS--EVTAMLEKG---------------- 236 (291)
T ss_dssp EC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH--HHHHHHHTT----------------
T ss_pred cccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcC----------------
Confidence 11223457899999999998899999999999999999999 99999753211 111111100
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 237 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 270 (291)
T 1xbb_A 237 --ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 270 (291)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0112233456779999999999999999998763
No 285
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.91 E-value=1.4e-25 Score=222.12 Aligned_cols=181 Identities=18% Similarity=0.216 Sum_probs=132.3
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCC--Ccc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSND--DFK-- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~--~~~-- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+. ...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 46789999999999999999987 579999999997542 34456789999999999999999999976321 100
Q ss_pred -------------------------------------------------------------------------ccccccc
Q 037488 499 -------------------------------------------------------------------------ADFGMAK 505 (628)
Q Consensus 499 -------------------------------------------------------------------------~DFGla~ 505 (628)
+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 2777776
Q ss_pred cccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceee
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVV 585 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (628)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||..... .........
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~---------- 230 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIRE---------- 230 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH----------
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhh----------
Confidence 543221 111234699999999999999999999999999999999999999975321 111111110
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. ....+..++.++.+++.+||+.||++|||+.||
T Consensus 231 -----~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 265 (279)
T 2w5a_A 231 -----GK---FRRIPYRYSDELNEIITRMLNLKDYHRPSVEEI 265 (279)
T ss_dssp -----TC---CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----cc---cccCCcccCHHHHHHHHHHcCCCcccCCCHHHH
Confidence 00 011223456679999999999999999998764
No 286
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.91 E-value=2.3e-25 Score=225.76 Aligned_cols=195 Identities=21% Similarity=0.331 Sum_probs=137.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-----cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc--c
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-----HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF--K 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~--~ 498 (628)
.++|...+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++||||+++++++...+. .
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688889999999999999983 4689999999987666667789999999999999999999998754320 0
Q ss_pred -------------------------------------------------------------------ccccccccccccC
Q 037488 499 -------------------------------------------------------------------ADFGMAKPLLKED 511 (628)
Q Consensus 499 -------------------------------------------------------------------~DFGla~~~~~~~ 511 (628)
+|||+|+......
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 3999998764332
Q ss_pred cc-cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee----ec
Q 037488 512 QS-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV----VD 586 (628)
Q Consensus 512 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 586 (628)
.. .......||..|+|||++.+..++.++||||+||++|||+||+.|+.... ..+............ +.
T Consensus 200 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 273 (326)
T 2w1i_A 200 EYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGNDKQGQMIVFHLI 273 (326)
T ss_dssp SEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH------HHHHHHHCTTCCTHHHHHHHH
T ss_pred cccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH------HHHHHhhccccchhhhHHHHH
Confidence 21 11233468889999999999899999999999999999999999875321 001000000000000 00
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+.. ......+..++.++.+++.+||+.||++|||+.||
T Consensus 274 ~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el 313 (326)
T 2w1i_A 274 ELLKN--NGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 313 (326)
T ss_dssp HHHHT--TCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHhhc--CCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHH
Confidence 00000 01122344567889999999999999999998763
No 287
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.91 E-value=1.7e-25 Score=222.86 Aligned_cols=184 Identities=23% Similarity=0.400 Sum_probs=126.4
Q ss_pred hcCCCcccccccCCccEEEEEEe--cCC--cEEEEEEeecc---chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI--HYG--MEVAVKVFDLQ---YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~--~~~--~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 498 (628)
.++|...+.||+|+||.||+|++ .++ ..||||+++.. .....+.+.+|++++++++||||+++++++..+...
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 96 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK 96 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCE
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCce
Confidence 45788899999999999999985 233 36999998753 234567789999999999999999999987654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+++.......
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 176 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD 176 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC
T ss_pred eeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc
Confidence 39999987643322
Q ss_pred c-cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeeccccc
Q 037488 513 S-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 513 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
. .......||..|+|||++.+..++.++||||+||++|||++ |+.||..... ..........
T Consensus 177 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~----------- 240 (291)
T 1u46_A 177 HYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG-----SQILHKIDKE----------- 240 (291)
T ss_dssp EEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHTS-----------
T ss_pred chhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH-----HHHHHHHHcc-----------
Confidence 1 12233468899999999998899999999999999999999 9999965321 1111111000
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+..++.++.+++.+||+.||++|||+.++
T Consensus 241 ---~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 275 (291)
T 1u46_A 241 ---GERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVAL 275 (291)
T ss_dssp ---CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---CCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHH
Confidence 00111233456779999999999999999998753
No 288
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.8e-24 Score=220.22 Aligned_cols=193 Identities=21% Similarity=0.329 Sum_probs=130.1
Q ss_pred HHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhc--ccCCCcceeeeeccCCC----
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKH--IRHRNLIKIISSCSNDD---- 496 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~---- 496 (628)
....++|...+.||+|+||.||+|+.. |+.||||++..... ..+.+|.+++.. ++||||+++++++....
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 108 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTEE---ASWFRETEIYQTVLMRHENILGFIAADIKGTGSWT 108 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGC
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecccc---chhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCC
Confidence 344578999999999999999999876 89999999964332 334455555554 49999999998765431
Q ss_pred cc-------------------------------------------------------------------------ccccc
Q 037488 497 FK-------------------------------------------------------------------------ADFGM 503 (628)
Q Consensus 497 ~~-------------------------------------------------------------------------~DFGl 503 (628)
.. +|||+
T Consensus 109 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~ 188 (337)
T 3mdy_A 109 QLYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 188 (337)
T ss_dssp EEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred ceEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCC
Confidence 00 39999
Q ss_pred cccccccCcc--cccccccccccccCccccccCccCcc------cchhhHhHHHHHHhhC----------CCCCCcccCC
Q 037488 504 AKPLLKEDQS--LIQTQTLATIGYMAPEYGREGRVSTN------GDVYSFGIMLIETFTR----------KKPTDEIFSG 565 (628)
Q Consensus 504 a~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~------~DVwS~Gvvl~e~ltg----------~~p~~~~~~~ 565 (628)
|+........ ......+||+.|+|||++.+..++.+ +|||||||++|||+|| +.||....+.
T Consensus 189 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~ 268 (337)
T 3mdy_A 189 AVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPS 268 (337)
T ss_dssp CEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCS
T ss_pred ceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCC
Confidence 8765433211 11234579999999999988776655 9999999999999999 6666554443
Q ss_pred CccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 566 EMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+......... ....+ .......++.++.+++.+||+.||++|||+.||
T Consensus 269 ~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~el 322 (337)
T 3mdy_A 269 DPSYEDMREIVCIKKL--------RPSFP-NRWSSDECLRQMGKLMTECWAHNPASRLTALRV 322 (337)
T ss_dssp SCCHHHHHHHHTTSCC--------CCCCC-GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred CCchhhhHHHHhhhcc--------Ccccc-ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHH
Confidence 3333332221111100 00000 011223678889999999999999999998764
No 289
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.91 E-value=9.7e-26 Score=226.02 Aligned_cols=195 Identities=21% Similarity=0.235 Sum_probs=117.5
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc--
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK-- 498 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~-- 498 (628)
....++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++||||+++++++..++..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 34467899999999999999999987 578999999986543 33456788999999999999999999876532210
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 037488 499 ------------------------------------------------------------------------ADFGMAKP 506 (628)
Q Consensus 499 ------------------------------------------------------------------------~DFGla~~ 506 (628)
+|||+++.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 39998876
Q ss_pred ccccCc---ccccccccccccccCcccccc-CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccc
Q 037488 507 LLKEDQ---SLIQTQTLATIGYMAPEYGRE-GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVM 582 (628)
Q Consensus 507 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 582 (628)
...... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........ . .......+....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~-~~~~~~~~~~~~ 248 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV-L-MLTLQNDPPSLE 248 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH-H-HHHHTSSCCCTT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH-H-HHHhccCCCccc
Confidence 533211 111234579999999999876 5689999999999999999999999976432211 1 111100000000
Q ss_pred eeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 583 KVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. .........++.++.+++.+||+.||++|||+.|+
T Consensus 249 ~~---------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 285 (303)
T 2vwi_A 249 TG---------VQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL 285 (303)
T ss_dssp C--------------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred cc---------cccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence 00 00011222346679999999999999999998763
No 290
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.91 E-value=3.5e-25 Score=244.68 Aligned_cols=178 Identities=17% Similarity=0.198 Sum_probs=136.6
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|.+++..+ +||+|+++++++.+.+..
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 457899999999999999999987 578999999997532 23456688899999988 799999999887654321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+......
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~-- 496 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG-- 496 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT--
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC--
Confidence 4999998643332
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCc
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQE 593 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 593 (628)
....+.+||+.|||||++.+..|+.++||||+||++|||++|++||.+... ....... +...
T Consensus 497 ~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-----~~~~~~i------------~~~~- 558 (674)
T 3pfq_A 497 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSI------------MEHN- 558 (674)
T ss_dssp CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHH------------HSSC-
T ss_pred cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-----HHHHHHH------------HhCC-
Confidence 223567899999999999999999999999999999999999999975321 1111111 1111
Q ss_pred ccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 594 DKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 594 ~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
...|...+.++.+|+.+||+.||++||++
T Consensus 559 ---~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 559 ---VAYPKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp ---CCCCTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred ---CCCCccCCHHHHHHHHHHccCCHHHCCCC
Confidence 11233456779999999999999999997
No 291
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.3e-23 Score=206.67 Aligned_cols=218 Identities=23% Similarity=0.274 Sum_probs=185.4
Q ss_pred eeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCc
Q 037488 139 IFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNK 218 (628)
Q Consensus 139 ~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~ 218 (628)
.+.+..+.+... .....+++|+.|++++|.+.. ++ .+..+++|++|++++|.+.+. ..+..+++|++|++++|.
T Consensus 23 ~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~~-~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~ 96 (272)
T 3rfs_A 23 KANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQ 96 (272)
T ss_dssp HHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-CT-TGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSC
T ss_pred HHHhcCcccccc--cccccccceeeeeeCCCCccc-cc-ccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCc
Confidence 344445544433 235578899999999999874 33 478899999999999999863 478899999999999999
Q ss_pred CcccCCCCccCCCCCcEEEccCCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccc
Q 037488 219 LSGFVPASFGNLTNLRSLHLGSNQITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPIT 297 (628)
Q Consensus 219 l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 297 (628)
+++..+..|..+++|++|++++|+++.+|.. +..+++|++|++++|.+++..+..+..+++|+.|++++|++++..+..
T Consensus 97 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~ 176 (272)
T 3rfs_A 97 LQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGV 176 (272)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHH
Confidence 9988888899999999999999999988765 577899999999999999888888899999999999999999888888
Q ss_pred cCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCC
Q 037488 298 IGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPRE 369 (628)
Q Consensus 298 ~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~ 369 (628)
++.+++|++|++++|++++..+..+..+++|+.|++++|.+.+. +++++.++++.|.++|.+|..
T Consensus 177 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 177 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred hcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 89999999999999999988888889999999999999988754 457888889999999998864
No 292
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=7.9e-24 Score=204.20 Aligned_cols=196 Identities=17% Similarity=0.212 Sum_probs=150.3
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCc-ccccCCccccCCCCCCEEEccC-CcCcccCCCCccCCCCCcEEE
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQ-LEGSIPDDLCRLAALFQLDLGS-NKLSGFVPASFGNLTNLRSLH 237 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~-l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~~~~~~~l~~L~~L~ 237 (628)
+|+.|++++|++++..+..|..+++|++|++++|+ ++...+..|.++++|++|++++ |++++..+..|..+++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 67788888888876666677778888888888886 7766666777888888888887 788777777788888888888
Q ss_pred ccCCcCCcCCCCccCCCCCc---EEEcCCC-CCcCCCCCcccCCcccc-EEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 238 LGSNQITSIPSTLLNLKDIL---YLNLSSN-FFTGPLPLEIGNLKVLI-KIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 238 L~~n~l~~lp~~~~~l~~L~---~L~l~~n-~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
+++|+++.+|. +..+++|+ +|++++| .+++..+..|..+++|+ .|++++|.++...+..+.. ++|+.|++++|
T Consensus 112 l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n 189 (239)
T 2xwt_C 112 IFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKN 189 (239)
T ss_dssp EEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTC
T ss_pred CCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCC
Confidence 88888888776 66677777 8888888 78777777788888888 8888888887544445554 78888888888
Q ss_pred c-CcccCChhhcCC-CCCCEEECcCCcccccCchhhhcCCCCCEEEccCC
Q 037488 313 R-LQGSIPDSIGDL-INLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFN 360 (628)
Q Consensus 313 ~-~~~~~~~~~~~l-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 360 (628)
+ +++..+..|..+ ++|+.|++++|.++++.+. .+.+|+.|+++++
T Consensus 190 ~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 190 KYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred CCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 4 876667778888 8888888888888765543 5667888887765
No 293
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.91 E-value=1.9e-24 Score=220.61 Aligned_cols=194 Identities=19% Similarity=0.314 Sum_probs=137.5
Q ss_pred HHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhc--ccCCCcceeeeeccCCC---
Q 037488 422 LFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKH--IRHRNLIKIISSCSNDD--- 496 (628)
Q Consensus 422 l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~--- 496 (628)
.....++|...+.||+|+||.||+|+.. |+.||||++.... ...+.+|+++++. ++||||+++++++....
T Consensus 37 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 37 QRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 3445678999999999999999999874 8999999996432 3457788888887 79999999998875542
Q ss_pred -cc-------------------------------------------------------------------------cccc
Q 037488 497 -FK-------------------------------------------------------------------------ADFG 502 (628)
Q Consensus 497 -~~-------------------------------------------------------------------------~DFG 502 (628)
.. +|||
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ceeEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECC
Confidence 00 3899
Q ss_pred ccccccccCccc--ccccccccccccCccccccC------ccCcccchhhHhHHHHHHhhC----------CCCCCcccC
Q 037488 503 MAKPLLKEDQSL--IQTQTLATIGYMAPEYGREG------RVSTNGDVYSFGIMLIETFTR----------KKPTDEIFS 564 (628)
Q Consensus 503 la~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DVwS~Gvvl~e~ltg----------~~p~~~~~~ 564 (628)
+|+......... ......||+.|+|||++.+. .++.++|||||||++|||+|| +.||.....
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~ 272 (342)
T 1b6c_B 193 LAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVP 272 (342)
T ss_dssp TCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSC
T ss_pred CceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCc
Confidence 887654332110 12345799999999998875 355799999999999999999 778866544
Q ss_pred CCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 565 GEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+.......... + ..+.. .....++..+.+++.+||+.||++|||+.||
T Consensus 273 ~~~~~~~~~~~~~~~~~~----~----~~~~~-~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i 327 (342)
T 1b6c_B 273 SDPSVEEMRKVVCEQKLR----P----NIPNR-WQSCEALRVMAKIMRECWYANGAARLTALRI 327 (342)
T ss_dssp SSCCHHHHHHHHTTSCCC----C----CCCGG-GGTSHHHHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred CcccHHHHHHHHHHHHhC----C----CCccc-ccchhHHHHHHHHHHHHhccChhhCCCHHHH
Confidence 444444433322211110 0 00000 0123567789999999999999999998764
No 294
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=4.5e-25 Score=224.11 Aligned_cols=183 Identities=23% Similarity=0.373 Sum_probs=127.4
Q ss_pred hcCCCcccccccCCccEEEEEEec-C----CcEEEEEEeeccc-hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH-Y----GMEVAVKVFDLQY-REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~-~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
...|...+.||+|+||.||+|... + +..||||+++... ......+.+|++++++++||||+++++++...+..
T Consensus 43 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 122 (333)
T 1mqb_A 43 PSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMM 122 (333)
T ss_dssp TTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred hHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcE
Confidence 356777899999999999999863 2 3469999997543 34456789999999999999999999988654321
Q ss_pred ------------------------------------------------------------------ccccccccccccCc
Q 037488 499 ------------------------------------------------------------------ADFGMAKPLLKEDQ 512 (628)
Q Consensus 499 ------------------------------------------------------------------~DFGla~~~~~~~~ 512 (628)
+|||+++.......
T Consensus 123 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 202 (333)
T 1mqb_A 123 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 202 (333)
T ss_dssp EEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------
T ss_pred EEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc
Confidence 39999987543321
Q ss_pred c-cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeeccccc
Q 037488 513 S-LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 513 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
. .......||+.|+|||++.+..++.++|||||||++|||++ |+.||..... .........
T Consensus 203 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~~~~------------ 265 (333)
T 1mqb_A 203 ATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN-----HEVMKAIND------------ 265 (333)
T ss_dssp --------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHHHT------------
T ss_pred cccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHC------------
Confidence 1 11223357889999999999999999999999999999999 9999965321 111111000
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+..++.++.+++.+||+.||++||++.|+
T Consensus 266 ~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 300 (333)
T 1mqb_A 266 G---FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI 300 (333)
T ss_dssp T---CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred C---CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 0 0111233456779999999999999999998753
No 295
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.91 E-value=2.2e-25 Score=222.60 Aligned_cols=188 Identities=18% Similarity=0.177 Sum_probs=131.2
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCC-Cc----
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSND-DF---- 497 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~---- 497 (628)
...++|...+.||+|+||.||+|+. .+++.||||++..... ...+.+|+++++.++|++++..+++|... +.
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 4467899999999999999999986 6799999998764322 24578899999999999888776655221 10
Q ss_pred -----------------------------------------------------------------cccccccccccccCc
Q 037488 498 -----------------------------------------------------------------KADFGMAKPLLKEDQ 512 (628)
Q Consensus 498 -----------------------------------------------------------------~~DFGla~~~~~~~~ 512 (628)
.+|||+|+.......
T Consensus 84 ~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~ 163 (296)
T 4hgt_A 84 MELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDART 163 (296)
T ss_dssp EECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTT
T ss_pred EEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCccc
Confidence 049999987643322
Q ss_pred c-----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCc--cHHHHHHhhcCCccceee
Q 037488 513 S-----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEM--TLKHWVNDLLPISVMKVV 585 (628)
Q Consensus 513 ~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~ 585 (628)
. .......||+.|+|||++.+..++.++||||+||++|||++|+.||........ ..........+
T Consensus 164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~------- 236 (296)
T 4hgt_A 164 HQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS------- 236 (296)
T ss_dssp CCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH-------
T ss_pred CccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhccccc-------
Confidence 1 112345799999999999999999999999999999999999999976433221 11111111000
Q ss_pred cccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 586 DAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. ........++.++.+++.+||+.||++|||++||
T Consensus 237 -----~---~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 271 (296)
T 4hgt_A 237 -----T---PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp -----S---CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred -----c---hhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHH
Confidence 0 0011112346779999999999999999998753
No 296
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.91 E-value=2.2e-25 Score=222.64 Aligned_cols=187 Identities=17% Similarity=0.168 Sum_probs=135.0
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCC-c-----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD-F----- 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~----- 497 (628)
..++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++.++|++++..++++.... .
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 357899999999999999999997 6799999999865432 245789999999999998877665542111 0
Q ss_pred ----------------------------------------------------------------cccccccccccccCcc
Q 037488 498 ----------------------------------------------------------------KADFGMAKPLLKEDQS 513 (628)
Q Consensus 498 ----------------------------------------------------------------~~DFGla~~~~~~~~~ 513 (628)
.+|||+|+........
T Consensus 85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (296)
T 3uzp_A 85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTH 164 (296)
T ss_dssp ECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTC
T ss_pred EecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccc
Confidence 0499999875433221
Q ss_pred -----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC--ccHHHHHHhhcCCccceeec
Q 037488 514 -----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE--MTLKHWVNDLLPISVMKVVD 586 (628)
Q Consensus 514 -----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 586 (628)
.......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ............
T Consensus 165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------- 236 (296)
T 3uzp_A 165 QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMS-------- 236 (296)
T ss_dssp CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHH--------
T ss_pred cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccC--------
Confidence 11234579999999999999999999999999999999999999997643221 111111111000
Q ss_pred ccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 587 AHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+..++.++.+++.+||+.||++|||+.||
T Consensus 237 ----~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 271 (296)
T 3uzp_A 237 ----T---PIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp ----S---CHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred ----C---chHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHH
Confidence 0 0011223456779999999999999999998763
No 297
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.91 E-value=5.4e-25 Score=229.86 Aligned_cols=133 Identities=20% Similarity=0.202 Sum_probs=92.3
Q ss_pred CCCc-ccccccCCccEEEEEEec---CCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccC--CCc----
Q 037488 428 GFSE-NNLIDRGGIGYVYKRRIH---YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSN--DDF---- 497 (628)
Q Consensus 428 ~~~~-~~~ig~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~--~~~---- 497 (628)
.|.. .+.||+|+||.||+|+.. +++.||||++..... ...+.+|++++++++|||||++++++.. +..
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~--~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI--SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC--CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC--CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3554 457999999999999864 578999999975322 2457899999999999999999998732 110
Q ss_pred --------------------------------------------------------------------------cccccc
Q 037488 498 --------------------------------------------------------------------------KADFGM 503 (628)
Q Consensus 498 --------------------------------------------------------------------------~~DFGl 503 (628)
.+|||+
T Consensus 99 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 99 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp EECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred EeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 039999
Q ss_pred cccccccCc-ccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcc
Q 037488 504 AKPLLKEDQ-SLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEI 562 (628)
Q Consensus 504 a~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~ 562 (628)
|+....... .......+||++|+|||++.+. .|+.++||||+||++|||++|++||...
T Consensus 179 a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 239 (405)
T 3rgf_A 179 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 239 (405)
T ss_dssp CC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred ceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCc
Confidence 986543211 1122446799999999999874 5899999999999999999999999653
No 298
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.2e-25 Score=230.32 Aligned_cols=181 Identities=20% Similarity=0.284 Sum_probs=130.6
Q ss_pred hcCCCcccccccCCccEEEEEEe----cCCcEEEEEEeeccc----hhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCC
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI----HYGMEVAVKVFDLQY----REAFKNFDIECDMMKHI-RHRNLIKIISSCSNDD 496 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 496 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ....+.+.+|+++++++ +||||+++++++..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46789999999999999999987 368999999986432 22345577899999999 6999999998775432
Q ss_pred cc------------------------------------------------------------------cccccccccccc
Q 037488 497 FK------------------------------------------------------------------ADFGMAKPLLKE 510 (628)
Q Consensus 497 ~~------------------------------------------------------------------~DFGla~~~~~~ 510 (628)
.. +|||+|+.....
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 11 499999865433
Q ss_pred CcccccccccccccccCccccccC--ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 511 DQSLIQTQTLATIGYMAPEYGREG--RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 511 ~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
.. ......+||+.|+|||++.++ .++.++|||||||++|||++|+.||....... ....+.....
T Consensus 213 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~----------- 279 (355)
T 1vzo_A 213 ET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRIL----------- 279 (355)
T ss_dssp GG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHH-----------
T ss_pred CC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHh-----------
Confidence 21 223446799999999999863 47899999999999999999999997532221 1222211110
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVN 624 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt 624 (628)
.. ....+..++..+.+++.+||+.||++||+
T Consensus 280 -~~----~~~~~~~~~~~~~~li~~~L~~dP~~R~~ 310 (355)
T 1vzo_A 280 -KS----EPPYPQEMSALAKDLIQRLLMKDPKKRLG 310 (355)
T ss_dssp -HC----CCCCCTTSCHHHHHHHHHHTCSSGGGSTT
T ss_pred -cc----CCCCCcccCHHHHHHHHHHhhhCHHHhcC
Confidence 00 11123345667999999999999999993
No 299
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.91 E-value=4.7e-25 Score=231.30 Aligned_cols=182 Identities=19% Similarity=0.254 Sum_probs=123.8
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCc-------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDF------- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~------- 497 (628)
..+|...+.||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.++..
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 345788899999999997665556799999999965322 2356899999999 89999999987654321
Q ss_pred ----------------------------------------------------------------cccccccccccccCc-
Q 037488 498 ----------------------------------------------------------------KADFGMAKPLLKEDQ- 512 (628)
Q Consensus 498 ----------------------------------------------------------------~~DFGla~~~~~~~~- 512 (628)
.+|||+|+.......
T Consensus 100 ~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~ 179 (432)
T 3p23_A 100 CAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS 179 (432)
T ss_dssp CSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------
T ss_pred CCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc
Confidence 149999987643321
Q ss_pred ccccccccccccccCccccc---cCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeeccc
Q 037488 513 SLIQTQTLATIGYMAPEYGR---EGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAH 588 (628)
Q Consensus 513 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (628)
.......+||++|+|||++. +..++.++||||+||++|||+| |+.||...... ..... ....
T Consensus 180 ~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~---~~~~~---~~~~-------- 245 (432)
T 3p23_A 180 FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR---QANIL---LGAC-------- 245 (432)
T ss_dssp ------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH---HHHHH---TTCC--------
T ss_pred eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH---HHHHH---hccC--------
Confidence 12234467999999999997 4567889999999999999999 99998542211 11110 0000
Q ss_pred ccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 589 LLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......+...+..+.+++.+||+.||++|||+.||
T Consensus 246 ----~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ev 281 (432)
T 3p23_A 246 ----SLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHV 281 (432)
T ss_dssp ----CCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred ----CccccCccccccHHHHHHHHHHHhCCHhhCCCHHHH
Confidence 000001112345668999999999999999998763
No 300
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.91 E-value=9.3e-25 Score=229.75 Aligned_cols=182 Identities=21% Similarity=0.326 Sum_probs=124.8
Q ss_pred CCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCc---------
Q 037488 428 GFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDF--------- 497 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~--------- 497 (628)
.|...+.||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +|||||++++++..++.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 345567899999999987666679999999986543 34578899999987 89999999887643221
Q ss_pred ----------------------------------------------------------------------------cccc
Q 037488 498 ----------------------------------------------------------------------------KADF 501 (628)
Q Consensus 498 ----------------------------------------------------------------------------~~DF 501 (628)
.+||
T Consensus 93 gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 93 LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 1388
Q ss_pred cccccccccCccc--ccccccccccccCcccccc-------CccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHH
Q 037488 502 GMAKPLLKEDQSL--IQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 502 Gla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~ 571 (628)
|+|+......... .....+||++|+|||++.+ ..++.++||||+||++|||+| |+.||.+..... ..
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~---~~ 249 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE---SN 249 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH---HH
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH---HH
Confidence 8888654332111 1234579999999999876 568999999999999999999 999996532211 11
Q ss_pred HHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 572 WVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
+....... .......+..++.++.+++.+||+.||++|||+.||
T Consensus 250 i~~~~~~~-------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ei 293 (434)
T 2rio_A 250 IIRGIFSL-------------DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293 (434)
T ss_dssp HHHTCCCC-------------CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HhcCCCCc-------------ccccccccccchHHHHHHHHHHhhCChhhCCCHHHH
Confidence 11111000 000111223467789999999999999999998763
No 301
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.91 E-value=1.6e-24 Score=234.26 Aligned_cols=196 Identities=20% Similarity=0.264 Sum_probs=133.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccC------CCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSN------DDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~------~~~ 497 (628)
.++|...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++|||||++++++.. ++.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 37899999999999999999987 67999999998754 34456778999999999999999999887643 110
Q ss_pred ------------------------------------------------------------------------cccccccc
Q 037488 498 ------------------------------------------------------------------------KADFGMAK 505 (628)
Q Consensus 498 ------------------------------------------------------------------------~~DFGla~ 505 (628)
.+|||+|+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~ 172 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAK 172 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccccc
Confidence 03899988
Q ss_pred cccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce-e
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK-V 584 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~ 584 (628)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.... ....|........... .
T Consensus 173 ~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~ 245 (676)
T 3qa8_A 173 ELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIV 245 (676)
T ss_dssp BTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CC
T ss_pred cccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhh
Confidence 654332 2245679999999999999999999999999999999999999996421 1111111110000000 0
Q ss_pred ecccccC------CcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLS------QEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
......+ ..+.........+.++.+++.+||+.||++|||+.|+
T Consensus 246 ~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 246 VYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 0000000 0111112334578889999999999999999999874
No 302
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.6e-25 Score=227.79 Aligned_cols=188 Identities=9% Similarity=0.058 Sum_probs=130.5
Q ss_pred hcCCCcccccccCCccEEEEEEec---------CCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcce---------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH---------YGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIK--------- 487 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~---------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 487 (628)
.++|...+.||+|+||.||+|+.. .++.||||++... +.+.+|++++++++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 367899999999999999999874 3789999998744 35788999999999999997
Q ss_pred ------eeeeccC-CCc---------------------------------------------------------------
Q 037488 488 ------IISSCSN-DDF--------------------------------------------------------------- 497 (628)
Q Consensus 488 ------l~~~~~~-~~~--------------------------------------------------------------- 497 (628)
+++++.. +..
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~ 195 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPE 195 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETT
T ss_pred ccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCC
Confidence 3333322 100
Q ss_pred ------cccccccccccccCcc-----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC
Q 037488 498 ------KADFGMAKPLLKEDQS-----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE 566 (628)
Q Consensus 498 ------~~DFGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~ 566 (628)
.+|||+|+........ .......||+.|+|||++.+..++.++|||||||++|||++|+.||....+..
T Consensus 196 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 275 (352)
T 2jii_A 196 DQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT 275 (352)
T ss_dssp EEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCH
Confidence 0499999876433211 11133479999999999999999999999999999999999999998654332
Q ss_pred ccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 567 MTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
............ ......+. ...+..++.++.+++.+||+.||++|||+.||
T Consensus 276 ~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 276 EDIMKQKQKFVD-KPGPFVGP---------CGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp HHHHHHHHHHHH-SCCCEECT---------TSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHhccC-Chhhhhhh---------ccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 222222211100 00011110 01112346679999999999999999998763
No 303
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.90 E-value=8.6e-25 Score=220.76 Aligned_cols=183 Identities=18% Similarity=0.204 Sum_probs=116.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.++..+++.++||||+++++++..++..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 46788889999999999999997 579999999997543 22233445556678888999999999987654321
Q ss_pred ---------------------------------------------------------------ccccccccccccCcccc
Q 037488 499 ---------------------------------------------------------------ADFGMAKPLLKEDQSLI 515 (628)
Q Consensus 499 ---------------------------------------------------------------~DFGla~~~~~~~~~~~ 515 (628)
+|||+++...... .
T Consensus 104 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---~ 180 (318)
T 2dyl_A 104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK---A 180 (318)
T ss_dssp CCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----------
T ss_pred eccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc---c
Confidence 3899887653322 1
Q ss_pred cccccccccccCccccc-----cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeeccccc
Q 037488 516 QTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLL 590 (628)
Q Consensus 516 ~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 590 (628)
.....||+.|+|||++. +..++.++|||||||++|||++|+.||..................
T Consensus 181 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------- 247 (318)
T 2dyl_A 181 KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP------------- 247 (318)
T ss_dssp ------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCC-------------
T ss_pred ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCC-------------
Confidence 23457999999999984 456899999999999999999999999753221111111111000
Q ss_pred CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 591 SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 591 ~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
...+....++.++.+++.+||+.||++|||+.|+
T Consensus 248 ----~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 281 (318)
T 2dyl_A 248 ----PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKL 281 (318)
T ss_dssp ----CCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred ----CCCCccCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 0001112345679999999999999999998753
No 304
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.90 E-value=1.3e-24 Score=226.72 Aligned_cols=197 Identities=18% Similarity=0.113 Sum_probs=133.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc--------CCCcceeeeecc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR--------HRNLIKIISSCS--- 493 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~--- 493 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++.. ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999999986 67899999999743 334567889999999996 788999988764
Q ss_pred -CCCc---------------------------------------------------------------------------
Q 037488 494 -NDDF--------------------------------------------------------------------------- 497 (628)
Q Consensus 494 -~~~~--------------------------------------------------------------------------- 497 (628)
.+..
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 1100
Q ss_pred ------------------------------------------cccccccccccccCcccccccccccccccCccccccCc
Q 037488 498 ------------------------------------------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGR 535 (628)
Q Consensus 498 ------------------------------------------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 535 (628)
.+|||+|+..... ....+||+.|+|||++.+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~ 269 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEVLIGSG 269 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHHHHTSC
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChhhcCCC
Confidence 0255555543211 23457999999999999999
Q ss_pred cCcccchhhHhHHHHHHhhCCCCCCcccCCCcc----HHHHHHhhcCCccce----------eeccc--cc---------
Q 037488 536 VSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMT----LKHWVNDLLPISVMK----------VVDAH--LL--------- 590 (628)
Q Consensus 536 ~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~----~~~~~~~~~~~~~~~----------~~~~~--~~--------- 590 (628)
|+.++||||+||++|||+||+.||......... ............... ..... ..
T Consensus 270 ~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (397)
T 1wak_A 270 YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349 (397)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCC
T ss_pred CCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcc
Confidence 999999999999999999999999764332211 011111110000000 00000 00
Q ss_pred --CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 591 --SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 591 --~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.........+...+.++.+|+.+||+.||++|||+.||
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 389 (397)
T 1wak_A 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAEC 389 (397)
T ss_dssp HHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHH
T ss_pred hhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHH
Confidence 00000112334567889999999999999999998764
No 305
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.90 E-value=6.8e-25 Score=226.35 Aligned_cols=186 Identities=12% Similarity=0.068 Sum_probs=120.7
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcc--cCCCcceeee-------ec
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHI--RHRNLIKIIS-------SC 492 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~~-------~~ 492 (628)
...|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+.+++.+ +|||||+++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 34588889999999999999997 579999999997643 23456677885544444 6999877431 11
Q ss_pred cC-----------------------------CC----------------c------------------------------
Q 037488 493 SN-----------------------------DD----------------F------------------------------ 497 (628)
Q Consensus 493 ~~-----------------------------~~----------------~------------------------------ 497 (628)
.. ++ .
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 00 00 0
Q ss_pred --------------cccccccccccccCcccccccccccccccCcccccc--CccCcccchhhHhHHHHHHhhCCCCCCc
Q 037488 498 --------------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGRE--GRVSTNGDVYSFGIMLIETFTRKKPTDE 561 (628)
Q Consensus 498 --------------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DVwS~Gvvl~e~ltg~~p~~~ 561 (628)
.+|||+|+..... .....||+.|+|||++.+ ..|+.++|||||||++|||+||+.||..
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~ 295 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTR-----GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGL 295 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCE-----EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTB
T ss_pred CHHHEEECCCCCEEEEecceeeecCCC-----ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCC
Confidence 0499999865321 124567899999999987 6799999999999999999999999986
Q ss_pred ccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 562 IFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..+.... ..... ..............+..++.++.+++.+||+.||++|||+.|+
T Consensus 296 ~~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~ 350 (371)
T 3q60_A 296 VTPGIKG-----------SWKRP-SLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEA 350 (371)
T ss_dssp CCTTCTT-----------CCCBC-CTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHH
T ss_pred cCccccc-----------chhhh-hhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 5332110 00000 0000011111122233567789999999999999999998653
No 306
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.90 E-value=1.6e-24 Score=221.81 Aligned_cols=194 Identities=15% Similarity=0.185 Sum_probs=133.2
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhH-----------------HHHHHHHHHHhhcccCCCccee
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREA-----------------FKNFDIECDMMKHIRHRNLIKI 488 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~l 488 (628)
.++|...+.||+|+||.||+|+. +|+.||||++....... .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 46899999999999999999998 89999999997532211 1778999999999999999999
Q ss_pred eeeccCCCcc----------------------------------------------------------------------
Q 037488 489 ISSCSNDDFK---------------------------------------------------------------------- 498 (628)
Q Consensus 489 ~~~~~~~~~~---------------------------------------------------------------------- 498 (628)
++++.+++..
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~ 188 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKN 188 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTT
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCC
Confidence 8876432110
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccC-ccCc-ccchhhHhHHHHHHhhCCCCCCcccCCCccHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG-RVST-NGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~ 571 (628)
+|||+++..... ......||+.|+|||++.+. .++. ++||||+||++|||++|+.||....... ....
T Consensus 189 ~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~ 263 (348)
T 2pml_X 189 GRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLV-ELFN 263 (348)
T ss_dssp SCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSH-HHHH
T ss_pred CcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHH
Confidence 388887754322 22445799999999999887 6776 9999999999999999999997543211 1111
Q ss_pred HHHhh-cCCc--cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 572 WVNDL-LPIS--VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 572 ~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... .+.. ......+.. .......+..++.++.+++.+||+.||++|||+.|+
T Consensus 264 ~i~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~ 320 (348)
T 2pml_X 264 NIRTKNIEYPLDRNHFLYPLT---NKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDA 320 (348)
T ss_dssp HHTSCCCCCCCSSSSSTTTTC---C--------CCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred HHhccCcCCccchhhhhcccc---ccccccchhhcCHHHHHHHHHHccCChhhCCCHHHH
Confidence 11110 0000 000000000 000001113456789999999999999999998763
No 307
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.90 E-value=6.3e-25 Score=223.59 Aligned_cols=201 Identities=21% Similarity=0.233 Sum_probs=124.9
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeecc------------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCS------------ 493 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~------------ 493 (628)
.++|...+.||+|+||.||+|+. +++.||||++....... ....+|+..+..++||||+++++++.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~-~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN-FINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGHHH-HHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccchhh-HHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 46888999999999999999976 58999999997543322 11234445556689999999986321
Q ss_pred ------CCCc-------------------------------------------------------------ccccccccc
Q 037488 494 ------NDDF-------------------------------------------------------------KADFGMAKP 506 (628)
Q Consensus 494 ------~~~~-------------------------------------------------------------~~DFGla~~ 506 (628)
.++. .+|||+|+.
T Consensus 90 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 1000 049999986
Q ss_pred ccccCc------ccccccccccccccCcccccc-------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHH
Q 037488 507 LLKEDQ------SLIQTQTLATIGYMAPEYGRE-------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWV 573 (628)
Q Consensus 507 ~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~ 573 (628)
+..... .......+||+.|+|||++.+ ..++.++|||||||++|||++|+.|+............+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~ 249 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQ 249 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhh
Confidence 543211 112234579999999999987 4678899999999999999999777543221111000000
Q ss_pred HhhcCCccce-----eecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 574 NDLLPISVMK-----VVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 574 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.......... +.........+........++.++.+++.+||+.||++|||+.||
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~ 309 (336)
T 3g2f_A 250 TEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXA 309 (336)
T ss_dssp HHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred cccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHH
Confidence 0000000000 000000111111112223467789999999999999999998764
No 308
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.90 E-value=6.8e-25 Score=218.11 Aligned_cols=174 Identities=17% Similarity=0.123 Sum_probs=129.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeecc--chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc---
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ--YREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~--- 498 (628)
.++|...+.||+|+||.||+|.. .+++.||||+++.. .......+.+|+..+..+ +||||+++++++.+++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 46788999999999999999987 57999999999753 233456788999999999 999999999987543211
Q ss_pred --------------------------------------------------------------------------------
Q 037488 499 -------------------------------------------------------------------------------- 498 (628)
Q Consensus 499 -------------------------------------------------------------------------------- 498 (628)
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~ 169 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN 169 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence
Q ss_pred ------ccccccccccccCcccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHH
Q 037488 499 ------ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 499 ------~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~ 571 (628)
+|||.++..... ....||+.|+|||++.+. .++.++||||+||++|||++|++|+... .....
T Consensus 170 ~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~~~~~ 239 (289)
T 1x8b_A 170 KVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----DQWHE 239 (289)
T ss_dssp CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----HHHHH
T ss_pred ceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----hHHHH
Confidence 267766654221 234699999999999876 5778999999999999999999876431 11111
Q ss_pred HHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 572 WVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
..... ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 240 ~~~~~-------------------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 277 (289)
T 1x8b_A 240 IRQGR-------------------LPRIPQVLSQEFTELLKVMIHPDPERRPSAMAL 277 (289)
T ss_dssp HHTTC-------------------CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHcCC-------------------CCCCCcccCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 11100 011223456679999999999999999998763
No 309
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=2e-23 Score=201.43 Aligned_cols=195 Identities=18% Similarity=0.220 Sum_probs=86.4
Q ss_pred CCCEEeccCCcccccCccccCCCCCCCEEEccCcc-ccCCCCCCcccccccCCCCCcEEEccc-CCCCCCCchHHhcccc
Q 037488 58 KLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNY-LTSSTPKLNFLSSLSNCKYLKYFSFSN-NSLDGILPRAIGNLSQ 135 (628)
Q Consensus 58 ~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~-l~~~~~~~~~~~~~~~l~~L~~L~l~~-n~l~~~~p~~~~~l~~ 135 (628)
+|+.|++++|+++++.+.+|.++++|+.|++++|. ++.+++ ..|.++++|++|++++ |.++++.+..|..++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~-----~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~- 105 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLES-----HSFYNLSKVTHIEIRNTRNLTYIDPDALKELP- 105 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECT-----TTEESCTTCCEEEEEEETTCCEECTTSEECCT-
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCH-----hHcCCCcCCcEEECCCCCCeeEcCHHHhCCCC-
Confidence 45555555555555554455555555555555554 444332 1244555555555554 444432222211111
Q ss_pred ccceeeccCCcccccCCccccCCCCCC---EEEccCC-cCCccccccccCCCCCC-EeecccCcccccCCccccCCCCCC
Q 037488 136 SMEIFWMHSCNISGGIPEEISNLTNLI---AIYLGGN-KLNGSIPIALGKLQKLQ-LLNLEYNQLEGSIPDDLCRLAALF 210 (628)
Q Consensus 136 ~l~~l~l~~n~~~~~~~~~~~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~L~~n~l~~~~p~~~~~l~~L~ 210 (628)
.|+.|++++|.+++ +|. |..+++|+ .|++++| .+.+..+..|..+++|+ +|++++|+++...+..+.. ++|+
T Consensus 106 ~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~ 182 (239)
T 2xwt_C 106 LLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLD 182 (239)
T ss_dssp TCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEE
T ss_pred CCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCC-CCCC
Confidence 11111111111111 111 23333333 5555555 55444444455555555 5555555554322222222 4555
Q ss_pred EEEccCCc-CcccCCCCccCC-CCCcEEEccCCcCCcCCCCccCCCCCcEEEcCC
Q 037488 211 QLDLGSNK-LSGFVPASFGNL-TNLRSLHLGSNQITSIPSTLLNLKDILYLNLSS 263 (628)
Q Consensus 211 ~L~L~~n~-l~~~~~~~~~~l-~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~ 263 (628)
.|++++|+ ++...+..|..+ ++|+.|++++|+++.+|.. .+++|+.|++++
T Consensus 183 ~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~ 235 (239)
T 2xwt_C 183 AVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARN 235 (239)
T ss_dssp EEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTT
T ss_pred EEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccC
Confidence 55555553 554444455555 5555555555555555443 334444444444
No 310
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.90 E-value=3e-25 Score=224.97 Aligned_cols=186 Identities=22% Similarity=0.289 Sum_probs=128.7
Q ss_pred HHHHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCC--
Q 037488 421 ELFQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDD-- 496 (628)
Q Consensus 421 ~l~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~-- 496 (628)
++....+.|...+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 3345578899999999999999999997 6799999999975432 346688999999999 8999999999875321
Q ss_pred ----cc--------------------------------------------------------------------cccccc
Q 037488 497 ----FK--------------------------------------------------------------------ADFGMA 504 (628)
Q Consensus 497 ----~~--------------------------------------------------------------------~DFGla 504 (628)
.. +|||++
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 00 399998
Q ss_pred ccccccCcccccccccccccccCccccc-----cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCC
Q 037488 505 KPLLKEDQSLIQTQTLATIGYMAPEYGR-----EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPI 579 (628)
Q Consensus 505 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~ 579 (628)
+...... .......||+.|+|||++. +..++.++||||+||++|||++|+.||....... ........ +
T Consensus 177 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~--~- 250 (326)
T 2x7f_A 177 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPRN--P- 250 (326)
T ss_dssp C---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHS--C-
T ss_pred eecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcC--c-
Confidence 8653221 1123457999999999987 5678999999999999999999999996532111 00000000 0
Q ss_pred ccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 580 SVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+ ...+..++.++.+++.+||+.||++|||+.|+
T Consensus 251 ------~~---------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 284 (326)
T 2x7f_A 251 ------AP---------RLKSKKWSKKFQSFIESCLVKNHSQRPATEQL 284 (326)
T ss_dssp ------CC---------CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred ------cc---------cCCccccCHHHHHHHHHHhccChhhCCCHHHH
Confidence 00 00112345679999999999999999998753
No 311
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.90 E-value=9.3e-25 Score=226.23 Aligned_cols=132 Identities=20% Similarity=0.217 Sum_probs=105.5
Q ss_pred hhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-CC-----CcceeeeeccCCCc
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-HR-----NLIKIISSCSNDDF 497 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 497 (628)
..++|...+.||+|+||.||+|+. .+++.||||+++... .....+.+|+++++.++ |+ +|+++++++..++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 130 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNH 130 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTE
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCc
Confidence 357899999999999999999987 578999999997432 33566788999988885 55 38888776543211
Q ss_pred -----------------------------------------------------------------------ccccccccc
Q 037488 498 -----------------------------------------------------------------------KADFGMAKP 506 (628)
Q Consensus 498 -----------------------------------------------------------------------~~DFGla~~ 506 (628)
.+|||+|+.
T Consensus 131 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 131 LCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred eEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 049999886
Q ss_pred ccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcc
Q 037488 507 LLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEI 562 (628)
Q Consensus 507 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~ 562 (628)
.... ....+||+.|+|||++.+..|+.++|||||||++|||+||++||...
T Consensus 211 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 211 LGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp TTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 5322 23567999999999999999999999999999999999999999753
No 312
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.90 E-value=8.6e-25 Score=226.00 Aligned_cols=197 Identities=13% Similarity=0.124 Sum_probs=133.6
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-----------CCCcceeeeecc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-----------HRNLIKIISSCS 493 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 493 (628)
.++|...+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46789999999999999999987 679999999997432 34466789999999887 899999988764
Q ss_pred CCC----c------------------------------------------------------------------------
Q 037488 494 NDD----F------------------------------------------------------------------------ 497 (628)
Q Consensus 494 ~~~----~------------------------------------------------------------------------ 497 (628)
... .
T Consensus 97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~ 176 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQ 176 (373)
T ss_dssp EEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEE
T ss_pred ccCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcce
Confidence 321 0
Q ss_pred --cccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCC-----ccHH
Q 037488 498 --KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGE-----MTLK 570 (628)
Q Consensus 498 --~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~-----~~~~ 570 (628)
.+|||+|+..... ....+||+.|+|||++.+..++.++||||+||++|||+||+.||....... ..+.
T Consensus 177 ~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 251 (373)
T 1q8y_A 177 IKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIA 251 (373)
T ss_dssp EEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHH
T ss_pred EEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHH
Confidence 0388888754322 234579999999999999999999999999999999999999997543211 1111
Q ss_pred HHHHhhc--CCc-----------------cceeecccc---cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 571 HWVNDLL--PIS-----------------VMKVVDAHL---LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 571 ~~~~~~~--~~~-----------------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....... +.. ...+..... ..........+..++.++.+|+.+||+.||++|||+.||
T Consensus 252 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 331 (373)
T 1q8y_A 252 QIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGL 331 (373)
T ss_dssp HHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHH
T ss_pred HHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHH
Confidence 1111100 000 000000000 000001112345678889999999999999999998764
No 313
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.90 E-value=6.9e-25 Score=222.32 Aligned_cols=179 Identities=25% Similarity=0.388 Sum_probs=127.6
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcE--EEEEEeecc-chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCc----
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGME--VAVKVFDLQ-YREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDF---- 497 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~---- 497 (628)
++|...+.||+|+||.||+|+. .+|+. ||||+++.. .....+.+.+|+++++++ +||||+++++++..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 6788889999999999999987 55665 499998753 233456788999999999 99999999987643210
Q ss_pred ----------------------------------c--------------------------------------------c
Q 037488 498 ----------------------------------K--------------------------------------------A 499 (628)
Q Consensus 498 ----------------------------------~--------------------------------------------~ 499 (628)
. +
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~ 184 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA 184 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEc
Confidence 0 3
Q ss_pred cccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcC
Q 037488 500 DFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLP 578 (628)
Q Consensus 500 DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~ 578 (628)
|||+++...... ......+|+.|+|||++.+..++.++||||+||++|||+| |+.||..... .........
T Consensus 185 Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~-----~~~~~~~~~ 256 (327)
T 1fvr_A 185 DFGLSRGQEVYV---KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQ 256 (327)
T ss_dssp CTTCEESSCEEC---CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH-----HHHHHHGGG
T ss_pred ccCcCccccccc---cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH-----HHHHHHhhc
Confidence 999887432221 1233458899999999998899999999999999999998 9999965321 111111100
Q ss_pred CccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 579 ISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. .....+..++.++.+++.+||+.||++|||+.|+
T Consensus 257 ------------~---~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 291 (327)
T 1fvr_A 257 ------------G---YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 291 (327)
T ss_dssp ------------T---CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ------------C---CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 0112233456779999999999999999998753
No 314
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.90 E-value=9.2e-25 Score=240.59 Aligned_cols=183 Identities=20% Similarity=0.316 Sum_probs=133.5
Q ss_pred hhcCCCcccccccCCccEEEEEEec----CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc-
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIH----YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~----~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 498 (628)
..++|...+.||+|+||.||+|... .+..||||+++.. .....+.+.+|+.++++++|||||++++++.++...
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~l 467 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWI 467 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEE
Confidence 3567888999999999999999863 2567999998753 334457799999999999999999999988653321
Q ss_pred -----------------------------------------------------------------ccccccccccccCcc
Q 037488 499 -----------------------------------------------------------------ADFGMAKPLLKEDQS 513 (628)
Q Consensus 499 -----------------------------------------------------------------~DFGla~~~~~~~~~ 513 (628)
+|||+|+.......
T Consensus 468 v~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~- 546 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY- 546 (656)
T ss_dssp EEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC----
T ss_pred EEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc-
Confidence 49999987643321
Q ss_pred cccccccccccccCccccccCccCcccchhhHhHHHHHHhh-CCCCCCcccCCCccHHHHHHhhcCCccceeecccccCC
Q 037488 514 LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFT-RKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQ 592 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~lt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 592 (628)
.......||+.|||||++.+..|+.++|||||||++|||++ |+.||.+.... ........ .
T Consensus 547 ~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~--~~~~~i~~---------------~- 608 (656)
T 2j0j_A 547 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIEN---------------G- 608 (656)
T ss_dssp -------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH--HHHHHHHH---------------T-
T ss_pred eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHc---------------C-
Confidence 12233468899999999998999999999999999999997 99999753211 11111110 0
Q ss_pred cccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 593 EDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 593 ~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.....+..++.++.+++.+||+.||++|||+.||
T Consensus 609 --~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el 642 (656)
T 2j0j_A 609 --ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 642 (656)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred --CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHH
Confidence 0112334567789999999999999999998763
No 315
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.90 E-value=3.6e-25 Score=223.58 Aligned_cols=175 Identities=21% Similarity=0.270 Sum_probs=132.2
Q ss_pred HHhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch------hHHHHHHHHHHHhhccc--CCCcceeeeecc
Q 037488 423 FQATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR------EAFKNFDIECDMMKHIR--HRNLIKIISSCS 493 (628)
Q Consensus 423 ~~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~ 493 (628)
....++|...+.||+|+||.||+|.. .+++.||||+++.... ...+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34467899999999999999999986 6799999999975432 12345678999999996 599999999876
Q ss_pred CCCcc--------------------------------------------------------------------ccccccc
Q 037488 494 NDDFK--------------------------------------------------------------------ADFGMAK 505 (628)
Q Consensus 494 ~~~~~--------------------------------------------------------------------~DFGla~ 505 (628)
.++.. +|||+++
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 53311 3999998
Q ss_pred cccccCcccccccccccccccCccccccCcc-CcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee
Q 037488 506 PLLKEDQSLIQTQTLATIGYMAPEYGREGRV-STNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584 (628)
Q Consensus 506 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (628)
...... .....||+.|+|||++.+..+ +.++|||||||++|||++|+.||.... .....
T Consensus 199 ~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~~--------- 258 (320)
T 3a99_A 199 LLKDTV----YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIRG--------- 258 (320)
T ss_dssp ECCSSC----BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHC---------
T ss_pred cccccc----ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhcc---------
Confidence 654321 234579999999999987776 788999999999999999999996421 01000
Q ss_pred ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. ...+..++.++.+++.+||+.||++|||+.||
T Consensus 259 ---~--------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 291 (320)
T 3a99_A 259 ---Q--------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEI 291 (320)
T ss_dssp ---C--------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred ---c--------ccccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 01122345679999999999999999998763
No 316
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.90 E-value=4.5e-25 Score=218.95 Aligned_cols=171 Identities=25% Similarity=0.372 Sum_probs=129.4
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccC----------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSN---------- 494 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~---------- 494 (628)
.++|...+.||+|+||.||+|+. .+|+.||||+++... ..+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 45688899999999999999997 479999999997543 246789999999999999999887532
Q ss_pred -------------------CCcc-------------------------------------------------------cc
Q 037488 495 -------------------DDFK-------------------------------------------------------AD 500 (628)
Q Consensus 495 -------------------~~~~-------------------------------------------------------~D 500 (628)
+... +|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~D 165 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGD 165 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECC
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECc
Confidence 0000 39
Q ss_pred ccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCc
Q 037488 501 FGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPIS 580 (628)
Q Consensus 501 FGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~ 580 (628)
||+++...... ......||+.|+|||++.+..++.++||||+||++|||++|+.|+.... .+.....
T Consensus 166 fg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~-------~~~~~~~--- 232 (284)
T 2a19_B 166 FGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS-------KFFTDLR--- 232 (284)
T ss_dssp CTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH-------HHHHHHH---
T ss_pred chhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH-------HHHHHhh---
Confidence 99998764432 1234579999999999999999999999999999999999998874310 0110000
Q ss_pred cceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 581 VMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 581 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. ..+..++.++.+++.+||+.||++|||+.|+
T Consensus 233 -----~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 265 (284)
T 2a19_B 233 -----DG----------IISDIFDKKEKTLLQKLLSKKPEDRPNTSEI 265 (284)
T ss_dssp -----TT----------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred -----cc----------cccccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 00 0112235568999999999999999998763
No 317
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=4.4e-25 Score=242.80 Aligned_cols=358 Identities=14% Similarity=0.039 Sum_probs=243.3
Q ss_pred CcccCCCcccCCChhccCC--CCCCEEecCccC-------------CCCCCEEEccCCcceec----CCccccCCCCCCE
Q 037488 1 MAFSFNKLVGVVPTTIFNV--STLNSLYLQNVQ-------------LQNLEELLLWGNNFSGT----IPSFIFNASKLSR 61 (628)
Q Consensus 1 l~ls~N~l~~~~p~~~~~l--~~L~~L~l~~n~-------------l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~ 61 (628)
|+|++|.+++..+..+... .+|++|++++|. +++|++|+|++|.+++. ++..+.++++|+.
T Consensus 117 L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~ 196 (592)
T 3ogk_B 117 VHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEV 196 (592)
T ss_dssp EEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCE
T ss_pred EEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccE
Confidence 4677777776666666553 348888887663 56788888888877654 2334456777777
Q ss_pred EeccCCcccccC----ccccCCCCCCCEEEccCccccCCCC---------------------CCcccccccCCCCCcEEE
Q 037488 62 LELQMNSFYGFI----PNTFGNLRNLNRLGLNDNYLTSSTP---------------------KLNFLSSLSNCKYLKYFS 116 (628)
Q Consensus 62 L~L~~N~l~~~~----~~~f~~l~~L~~L~L~~N~l~~~~~---------------------~~~~~~~~~~l~~L~~L~ 116 (628)
|++++|.++++. +..+.++++|+.|++++|.+..++. .......+..+++|+.|+
T Consensus 197 L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ 276 (592)
T 3ogk_B 197 LNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLG 276 (592)
T ss_dssp EECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEE
T ss_pred EEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccC
Confidence 777777776332 3344567777777777776544210 001123455667777777
Q ss_pred cccCCCCCCCchHHhccccccceeeccCCcccccCC-ccccCCCCCCEEEccCCcCCccccccccCCCCCCEeeccc---
Q 037488 117 FSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIP-EEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY--- 192 (628)
Q Consensus 117 l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~-~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~--- 192 (628)
++++.. ..+|..+..++ .|+.|++++|.++.... ..+..+++|+.|+++++-..+.++.....+++|++|++++
T Consensus 277 l~~~~~-~~l~~~~~~~~-~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~ 354 (592)
T 3ogk_B 277 LSYMGP-NEMPILFPFAA-QIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGAD 354 (592)
T ss_dssp ETTCCT-TTGGGGGGGGG-GCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCC
T ss_pred ccccch-hHHHHHHhhcC-CCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcc
Confidence 776533 34566565554 79999999998765433 3467899999999984433333444456789999999993
Q ss_pred --------Cccccc-CCccccCCCCCCEEEccCCcCcccCCCCccC-CCCCcEEEcc----CCcCCcCCCC------ccC
Q 037488 193 --------NQLEGS-IPDDLCRLAALFQLDLGSNKLSGFVPASFGN-LTNLRSLHLG----SNQITSIPST------LLN 252 (628)
Q Consensus 193 --------n~l~~~-~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~----~n~l~~lp~~------~~~ 252 (628)
|.+++. ++..+..+++|++|+++.|.+++..+..+.. +++|+.|+++ .|.++..|.. +..
T Consensus 355 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~ 434 (592)
T 3ogk_B 355 EQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIG 434 (592)
T ss_dssp SSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHH
T ss_pred ccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHh
Confidence 555532 1222456899999999999998766556655 8899999996 7788875532 556
Q ss_pred CCCCcEEEcCCCC--CcCCCCCcc-cCCccccEEEcCCCcCCC-CCccccCCCCCCCEEeCCCCcCccc-CChhhcCCCC
Q 037488 253 LKDILYLNLSSNF--FTGPLPLEI-GNLKVLIKIDLSMNNFSG-VIPITIGYLKDLQYLFLEYNRLQGS-IPDSIGDLIN 327 (628)
Q Consensus 253 l~~L~~L~l~~n~--l~~~~~~~~-~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~l~~n~~~~~-~~~~~~~l~~ 327 (628)
+++|++|++++|. +++.....+ ..+++|+.|++++|.+++ .++..+..+++|++|++++|.++.. ++..+..+++
T Consensus 435 ~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~ 514 (592)
T 3ogk_B 435 CKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPS 514 (592)
T ss_dssp CTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSS
T ss_pred CCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCc
Confidence 8999999997643 443333333 347889999999999875 3455567889999999999998654 3445567899
Q ss_pred CCEEECcCCcccccCchhh-hcCCCCCEEEccCC
Q 037488 328 LKSLDLSNNNLSGIIPISL-EKLLDLKDINVSFN 360 (628)
Q Consensus 328 L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N 360 (628)
|+.|++++|+++......+ ..++.+....+..+
T Consensus 515 L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 515 LRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp CCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred cCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 9999999999886533333 35566655555444
No 318
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.89 E-value=1.8e-24 Score=216.65 Aligned_cols=183 Identities=19% Similarity=0.224 Sum_probs=124.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccCCC--------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSNDD-------- 496 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 496 (628)
.++|+..+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 46788999999999999999997 57999999999653 344577899999999999999999988753210
Q ss_pred ------------------cc------------------------------------------------------cccccc
Q 037488 497 ------------------FK------------------------------------------------------ADFGMA 504 (628)
Q Consensus 497 ------------------~~------------------------------------------------------~DFGla 504 (628)
.. +|||++
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 163 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcch
Confidence 00 399999
Q ss_pred ccccccCc------------ccccccccccccccCccccccC-ccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHH
Q 037488 505 KPLLKEDQ------------SLIQTQTLATIGYMAPEYGREG-RVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 505 ~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~ 571 (628)
+....... ........||+.|+|||++.+. .++.++||||+||++|||++ ||.... ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----~~~~ 236 (303)
T 1zy4_A 164 KNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----ERVN 236 (303)
T ss_dssp SCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHH
T ss_pred hhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----hHHH
Confidence 86532110 1122345699999999999864 68999999999999999998 553211 1111
Q ss_pred HHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 572 WVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
....... .........+..++..+.+++.+||+.||++|||+.|+
T Consensus 237 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l 281 (303)
T 1zy4_A 237 ILKKLRS------------VSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTL 281 (303)
T ss_dssp HHHHHHS------------TTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHhccc------------cccccCccccccchHHHHHHHHHHHhcCcccCcCHHHH
Confidence 1111100 00011112233456678999999999999999998763
No 319
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.2e-23 Score=208.17 Aligned_cols=228 Identities=16% Similarity=0.180 Sum_probs=106.1
Q ss_pred CCCcEEEcccCCCCCCCchHH---hccccccceeeccCCcccccCCccc--cCCCCCCEEEccCCcCCcccc----cccc
Q 037488 110 KYLKYFSFSNNSLDGILPRAI---GNLSQSMEIFWMHSCNISGGIPEEI--SNLTNLIAIYLGGNKLNGSIP----IALG 180 (628)
Q Consensus 110 ~~L~~L~l~~n~l~~~~p~~~---~~l~~~l~~l~l~~n~~~~~~~~~~--~~l~~L~~L~L~~n~l~~~~p----~~~~ 180 (628)
..++.+.+.++.+....-..+ ..+ ..++.|++++|.+.+..|..+ ..+++|++|++++|.+.+..+ ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAY-SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHH-SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhccc-CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 346677777666542110000 011 124444444444444444444 445555555555555544322 2233
Q ss_pred CCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcc---cC-CCCccCCCCCcEEEccCCcCCcCCCCccCCCCC
Q 037488 181 KLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSG---FV-PASFGNLTNLRSLHLGSNQITSIPSTLLNLKDI 256 (628)
Q Consensus 181 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~---~~-~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L 256 (628)
.+++|++|+|++|++.+..+..+..+++|++|+|++|++.+ .. +..+..+++|++|+|++|+++.++....
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~----- 217 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCA----- 217 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHH-----
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHH-----
Confidence 44555555555555544444445555555555555555432 11 1122444455555555555443332100
Q ss_pred cEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCC---CCCCEEeCCCCcCcccCChhhcCCCCCCEEEC
Q 037488 257 LYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYL---KDLQYLFLEYNRLQGSIPDSIGDLINLKSLDL 333 (628)
Q Consensus 257 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l 333 (628)
..+..+++|++|+|++|++++..|..+..+ ++|++|++++|+++ .+|..+. ++|+.|++
T Consensus 218 ---------------~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~L 279 (310)
T 4glp_A 218 ---------------ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDL 279 (310)
T ss_dssp ---------------HHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEEC
T ss_pred ---------------HHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEEC
Confidence 012344455555555555554444433333 35555555555555 3344332 45666666
Q ss_pred cCCcccccCchhhhcCCCCCEEEccCCcce
Q 037488 334 SNNNLSGIIPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 334 ~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
++|+++++ |. +..+++|+.|++++|+++
T Consensus 280 s~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 280 SSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 66666543 21 445566666666666554
No 320
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.89 E-value=4.4e-24 Score=217.55 Aligned_cols=195 Identities=18% Similarity=0.182 Sum_probs=132.8
Q ss_pred hcCCCcccccccCCccEEEEEEe--cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCC------cceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI--HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRN------LIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|.. .+|+.||||+++... ...+.+.+|+++++.++|++ ++++++++..++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 46899999999999999999986 468999999997532 34567889999999998765 8888886643211
Q ss_pred --------------------------------------------------------------------------------
Q 037488 498 -------------------------------------------------------------------------------- 497 (628)
Q Consensus 498 -------------------------------------------------------------------------------- 497 (628)
T Consensus 92 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~ 171 (339)
T 1z57_A 92 ICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTL 171 (339)
T ss_dssp EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEE
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccc
Confidence
Q ss_pred ------cccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHH
Q 037488 498 ------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 498 ------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~ 571 (628)
.+|||+|+..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~ 244 (339)
T 1z57_A 172 INPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK--EHLA 244 (339)
T ss_dssp SCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH--HHHH
T ss_pred cCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence 1377777653221 23457999999999999999999999999999999999999999753221 1111
Q ss_pred HHHhhcCCccceeec----------ccc---------------cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 572 WVNDLLPISVMKVVD----------AHL---------------LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 572 ~~~~~~~~~~~~~~~----------~~~---------------~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
.+............. ... .............++.++.+++.+||+.||++|||+.
T Consensus 245 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 324 (339)
T 1z57_A 245 MMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLR 324 (339)
T ss_dssp HHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHH
Confidence 111111100000000 000 0000000112234577899999999999999999987
Q ss_pred CC
Q 037488 627 EI 628 (628)
Q Consensus 627 ev 628 (628)
|+
T Consensus 325 el 326 (339)
T 1z57_A 325 EA 326 (339)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 321
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.89 E-value=9.3e-25 Score=219.86 Aligned_cols=174 Identities=20% Similarity=0.289 Sum_probs=126.1
Q ss_pred HhhcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccch------hHHHHHHHHHHHhhcc----cCCCcceeeeec
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYR------EAFKNFDIECDMMKHI----RHRNLIKIISSC 492 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~l~~~~ 492 (628)
...++|...+.||+|+||.||+|+. .+++.||||+++.... .....+.+|+++++++ +||||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3457899999999999999999987 6789999999965432 1233466799999998 899999999987
Q ss_pred cCCCcc--------------------------------------------------------------------cccccc
Q 037488 493 SNDDFK--------------------------------------------------------------------ADFGMA 504 (628)
Q Consensus 493 ~~~~~~--------------------------------------------------------------------~DFGla 504 (628)
..++.. +|||++
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~ 187 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSG 187 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchh
Confidence 543211 399998
Q ss_pred ccccccCcccccccccccccccCccccccCccC-cccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccce
Q 037488 505 KPLLKEDQSLIQTQTLATIGYMAPEYGREGRVS-TNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMK 583 (628)
Q Consensus 505 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 583 (628)
+...... .....||..|+|||++.+..+. .++||||+||++|||++|+.||.... ....
T Consensus 188 ~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~--------- 247 (312)
T 2iwi_A 188 ALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILE--------- 247 (312)
T ss_dssp EECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH---------
T ss_pred hhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhh---------
Confidence 8654321 2345799999999999877764 58999999999999999999996421 0100
Q ss_pred eecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 584 VVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 584 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
. ....+..++.++.+++.+||+.||++|||+.|+
T Consensus 248 ---~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~ 281 (312)
T 2iwi_A 248 ---A--------ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEI 281 (312)
T ss_dssp ---T--------CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred ---h--------ccCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 0 011123345678999999999999999998763
No 322
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.89 E-value=1.8e-24 Score=229.13 Aligned_cols=188 Identities=15% Similarity=0.154 Sum_probs=131.5
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceee-eeccCCCc------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKII-SSCSNDDF------ 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~-~~~~~~~~------ 497 (628)
.++|...+.||+|+||.||+|+. .+++.||||+++.... ...+.+|+++++.++|++.+..+ .++..++.
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999999986 6799999999865432 23578899999999875544333 32221110
Q ss_pred ---------------------------------------------------------------cccccccccccccCcc-
Q 037488 498 ---------------------------------------------------------------KADFGMAKPLLKEDQS- 513 (628)
Q Consensus 498 ---------------------------------------------------------------~~DFGla~~~~~~~~~- 513 (628)
.+|||+|+.+......
T Consensus 84 ~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~ 163 (483)
T 3sv0_A 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQ 163 (483)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccc
Confidence 0499999876443221
Q ss_pred ----cccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccc
Q 037488 514 ----LIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHL 589 (628)
Q Consensus 514 ----~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (628)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...... .....
T Consensus 164 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~--~~~~~i--------~~~~~ 233 (483)
T 3sv0_A 164 HIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKK--QKYEKI--------SEKKV 233 (483)
T ss_dssp BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHH--HHHHHH--------HHHHH
T ss_pred ccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHH--HHHHHH--------hhccc
Confidence 1123567999999999999999999999999999999999999999864432211 111100 00000
Q ss_pred cCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 590 LSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.. .....+..++.++.+++.+||+.||++||++.+|
T Consensus 234 ~~---~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el 269 (483)
T 3sv0_A 234 AT---SIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYL 269 (483)
T ss_dssp HS---CHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred cc---cHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHH
Confidence 00 0011223456789999999999999999998753
No 323
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.89 E-value=2.9e-24 Score=218.37 Aligned_cols=183 Identities=16% Similarity=0.115 Sum_probs=106.3
Q ss_pred hhcCCCccc-ccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCcceeeeeccC----CCc-
Q 037488 425 ATNGFSENN-LIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNLIKIISSCSN----DDF- 497 (628)
Q Consensus 425 ~~~~~~~~~-~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~----~~~- 497 (628)
..++|...+ .||+|+||.||+|+. .+|+.||||++..... .. .+....++.++||||+++++++.. +..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-AR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 356788754 699999999999987 5799999999965321 11 122334566789999999887643 100
Q ss_pred ----------------------------------------------------------------------cccccccccc
Q 037488 498 ----------------------------------------------------------------------KADFGMAKPL 507 (628)
Q Consensus 498 ----------------------------------------------------------------------~~DFGla~~~ 507 (628)
.+|||+|+..
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~ 181 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceec
Confidence 0389988754
Q ss_pred cccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecc
Q 037488 508 LKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDA 587 (628)
Q Consensus 508 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 587 (628)
... .....+||+.|+|||++.+..|+.++||||+||++|||++|+.||.......... .. ...
T Consensus 182 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~-~~------------~~~ 244 (336)
T 3fhr_A 182 TQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISP-GM------------KRR 244 (336)
T ss_dssp --------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------
T ss_pred ccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhh-hH------------HHh
Confidence 322 1234579999999999999999999999999999999999999996533221100 00 000
Q ss_pred cccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 588 HLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 588 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
............+..++.++.+++.+||+.||++|||+.|+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~el 285 (336)
T 3fhr_A 245 IRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQF 285 (336)
T ss_dssp ------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred hhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 00011111112223567789999999999999999998763
No 324
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=1.2e-24 Score=223.47 Aligned_cols=256 Identities=18% Similarity=0.214 Sum_probs=122.7
Q ss_pred EEccCCcceecCCccccCCCCCCEEeccCCcccccCc----cccCCCC-CCCEEEccCccccCCCCCCcccccccCC-CC
Q 037488 38 LLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIP----NTFGNLR-NLNRLGLNDNYLTSSTPKLNFLSSLSNC-KY 111 (628)
Q Consensus 38 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~----~~f~~l~-~L~~L~L~~N~l~~~~~~~~~~~~~~~l-~~ 111 (628)
++++.|.+++.+|..+...++|++|+|++|.+++..+ ++|.+++ +|++|+|++|.++...+.. +...+... ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~-l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDE-LVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHH-HHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHH-HHHHHhccCCC
Confidence 4566666666666655555556666666666666555 5566666 6666666666665432110 00111111 66
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCC-CCCCEEEccCCcCCccccccc----cC-CCCC
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNL-TNLIAIYLGGNKLNGSIPIAL----GK-LQKL 185 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l-~~L~~L~L~~n~l~~~~p~~~----~~-l~~L 185 (628)
|++|+|++|.+++..+..+... +..+ ++|+.|++++|.+++..+..+ .. .++|
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~---------------------l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 140 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKT---------------------LAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASI 140 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHH---------------------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTC
T ss_pred ccEEECcCCcCChHHHHHHHHH---------------------HHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCce
Confidence 6666666666665544443321 1122 345555555555543333222 12 1355
Q ss_pred CEeecccCcccccC----CccccCCC-CCCEEEccCCcCcccCCCC----ccCC-CCCcEEEccCCcCCc-----CCCCc
Q 037488 186 QLLNLEYNQLEGSI----PDDLCRLA-ALFQLDLGSNKLSGFVPAS----FGNL-TNLRSLHLGSNQITS-----IPSTL 250 (628)
Q Consensus 186 ~~L~L~~n~l~~~~----p~~~~~l~-~L~~L~L~~n~l~~~~~~~----~~~l-~~L~~L~L~~n~l~~-----lp~~~ 250 (628)
++|+|++|++.... +..+..++ +|++|+|++|++++..+.. +..+ ++|+.|+|++|.++. ++..+
T Consensus 141 ~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l 220 (362)
T 3goz_A 141 TSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIF 220 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred eEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHH
Confidence 55555555554321 12223333 5555555555554433322 2223 355555555555554 33333
Q ss_pred cC-CCCCcEEEcCCCCCcCCCC----CcccCCccccEEEcCCCcCCCCCc-------cccCCCCCCCEEeCCCCcCc
Q 037488 251 LN-LKDILYLNLSSNFFTGPLP----LEIGNLKVLIKIDLSMNNFSGVIP-------ITIGYLKDLQYLFLEYNRLQ 315 (628)
Q Consensus 251 ~~-l~~L~~L~l~~n~l~~~~~----~~~~~l~~L~~L~Ls~N~l~~~~p-------~~~~~l~~L~~L~l~~n~~~ 315 (628)
.. .++|++|++++|.++...+ ..+..+++|+.|+|++|.+....+ ..+..+++|+.|++++|++.
T Consensus 221 ~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~ 297 (362)
T 3goz_A 221 SSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIH 297 (362)
T ss_dssp HHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCC
T ss_pred hcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCC
Confidence 33 2355555555555543322 223444555555555555333222 12334444455555555444
No 325
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.2e-22 Score=203.50 Aligned_cols=195 Identities=25% Similarity=0.373 Sum_probs=158.0
Q ss_pred ccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCc
Q 037488 155 ISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLR 234 (628)
Q Consensus 155 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 234 (628)
+..+++|+.|++++|.+.. +| .+..+++|++|++++|++.+..+ +..+++|++|++++|++++. +.+..+++|+
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--~~~~~l~~L~ 110 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIK 110 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--GGGTTCTTCC
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--hhhcCCCCCC
Confidence 4457788888888888874 44 57788888888888888875433 88888888888888888764 3688888889
Q ss_pred EEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcC
Q 037488 235 SLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314 (628)
Q Consensus 235 ~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 314 (628)
.|++++|.++.++. +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++
T Consensus 111 ~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l 185 (308)
T 1h6u_A 111 TLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKI 185 (308)
T ss_dssp EEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCC
T ss_pred EEECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCcc
Confidence 99998888888765 7788889999999988886544 7888889999999998886544 78888999999999998
Q ss_pred cccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCccee
Q 037488 315 QGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 315 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++
T Consensus 186 ~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 186 SDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 75433 7888899999999999987653 7888999999999998875
No 326
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=3.1e-23 Score=208.24 Aligned_cols=222 Identities=18% Similarity=0.190 Sum_probs=157.0
Q ss_pred CCCEEEccCCcCCccc-c--ccccCCCCCCEeecccCcccccCCccc--cCCCCCCEEEccCCcCcccCC----CCccCC
Q 037488 160 NLIAIYLGGNKLNGSI-P--IALGKLQKLQLLNLEYNQLEGSIPDDL--CRLAALFQLDLGSNKLSGFVP----ASFGNL 230 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~-p--~~~~~l~~L~~L~L~~n~l~~~~p~~~--~~l~~L~~L~L~~n~l~~~~~----~~~~~l 230 (628)
.++.+.+.++.+.... . ..+..+++|++|++++|.+.+..|..+ ..+++|++|++++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 4556666666554210 0 012234567777777777777777666 777777777777777775433 234467
Q ss_pred CCCcEEEccCCcCCcCC-CCccCCCCCcEEEcCCCCCcCC----CCCcccCCccccEEEcCCCcCCCCCcc---ccCCCC
Q 037488 231 TNLRSLHLGSNQITSIP-STLLNLKDILYLNLSSNFFTGP----LPLEIGNLKVLIKIDLSMNNFSGVIPI---TIGYLK 302 (628)
Q Consensus 231 ~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~----~~~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~ 302 (628)
++|++|+|++|.++.++ ..+..+++|++|++++|.+.+. .+..+..+++|++|+|++|+++...+. .++.++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~ 224 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGV 224 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTC
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCC
Confidence 78888888888887765 4566778888888888876541 123346788899999999998733221 346789
Q ss_pred CCCEEeCCCCcCcccCChhhcCC---CCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCCCCccccccccc
Q 037488 303 DLQYLFLEYNRLQGSIPDSIGDL---INLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPREGSFRNFLAES 379 (628)
Q Consensus 303 ~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~~~~~~~~~~~~ 379 (628)
+|++|++++|++++..|..+..+ ++|+.|++++|.++.+ |..+. ++|+.|++++|++++. |....+..+....
T Consensus 225 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~l-p~~~~--~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~ 300 (310)
T 4glp_A 225 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQV-PKGLP--AKLRVLDLSSNRLNRA-PQPDELPEVDNLT 300 (310)
T ss_dssp CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSC-CSCCC--SCCSCEECCSCCCCSC-CCTTSCCCCSCEE
T ss_pred CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCch-hhhhc--CCCCEEECCCCcCCCC-chhhhCCCccEEE
Confidence 99999999999998878777776 6999999999999954 55543 7999999999999974 3334456666667
Q ss_pred ccCCCc
Q 037488 380 FKGNEL 385 (628)
Q Consensus 380 ~~~~~~ 385 (628)
+.+|+.
T Consensus 301 L~~N~l 306 (310)
T 4glp_A 301 LDGNPF 306 (310)
T ss_dssp CSSTTT
T ss_pred CcCCCC
Confidence 777754
No 327
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=6.1e-22 Score=192.38 Aligned_cols=177 Identities=24% Similarity=0.297 Sum_probs=93.8
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEcc
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
+.+.++++++.++ .+|..+. +.|+.|+|++|++.+..+..|.++++|++|+|++|.+++..+..|..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455666666665 3444333 456666666666665555556666666666666666665555556666666666666
Q ss_pred CCcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccC
Q 037488 240 SNQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSI 318 (628)
Q Consensus 240 ~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 318 (628)
+|+++.+|. .+..+++|++|++++|.+++..+..|..+++|+.|+|++|++++..+..++.+++|++|+|++|++++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 666655543 2334555555555555555444444444555555555555544444434444444444444444444443
Q ss_pred ChhhcCCCCCCEEECcCCccc
Q 037488 319 PDSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 319 ~~~~~~l~~L~~L~l~~N~l~ 339 (628)
+..+..+++|+.|++++|.+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBC
T ss_pred HHHHhCCCCCCEEEeeCCcee
Confidence 434444444444444444443
No 328
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.89 E-value=1e-23 Score=216.33 Aligned_cols=195 Identities=18% Similarity=0.163 Sum_probs=130.8
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCC-cEEEEEEeeccchhHHHHHHHHHHHhhcccCCC------cceeeeeccCCCc
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYG-MEVAVKVFDLQYREAFKNFDIECDMMKHIRHRN------LIKIISSCSNDDF 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 497 (628)
.++|...+.||+|+||.||+|.. .++ +.||||+++.. ....+.+.+|++++++++|++ ++.+++++.....
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 46889999999999999999987 344 78999999743 234567888999999998876 7777765432110
Q ss_pred --------------------------------------------------------------------------------
Q 037488 498 -------------------------------------------------------------------------------- 497 (628)
Q Consensus 498 -------------------------------------------------------------------------------- 497 (628)
T Consensus 97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~ 176 (355)
T 2eu9_A 97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV 176 (355)
T ss_dssp EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEE
T ss_pred EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccccccccccccccccc
Confidence
Q ss_pred ------cccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHH
Q 037488 498 ------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKH 571 (628)
Q Consensus 498 ------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~ 571 (628)
.+|||+|+..... ....+||+.|+|||++.+..++.++||||+||++|||++|+.||...... ....
T Consensus 177 ~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~ 249 (355)
T 2eu9_A 177 KNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENR--EHLV 249 (355)
T ss_dssp SCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHH
T ss_pred CCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHH--HHHH
Confidence 1388888753222 23457999999999999999999999999999999999999999753221 1111
Q ss_pred HHHhhcCCcccee----------eccccc---------------CCcccchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 572 WVNDLLPISVMKV----------VDAHLL---------------SQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 572 ~~~~~~~~~~~~~----------~~~~~~---------------~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
.+........... ...... .............+.++.+++.+||+.||++|||+.
T Consensus 250 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ 329 (355)
T 2eu9_A 250 MMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLA 329 (355)
T ss_dssp HHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHH
Confidence 1111111000000 000000 000000011123466899999999999999999987
Q ss_pred CC
Q 037488 627 EI 628 (628)
Q Consensus 627 ev 628 (628)
|+
T Consensus 330 e~ 331 (355)
T 2eu9_A 330 EA 331 (355)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 329
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.88 E-value=2.2e-23 Score=214.67 Aligned_cols=173 Identities=12% Similarity=0.069 Sum_probs=125.5
Q ss_pred hhcCCCcccccccCCccEEEEEE------ecCCcEEEEEEeeccchhHHHHHHHHHHHhhccc---CCCcceeeeeccCC
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRR------IHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR---HRNLIKIISSCSND 495 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 495 (628)
..+.|...+.||+|+||.||+|. ..+++.||||+++.... ..+.+|+++++.++ |+||+++++++..+
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 35678889999999999999994 35688999999975433 34667777777775 99999998876432
Q ss_pred Ccc-----------------------------------------------------------------------------
Q 037488 496 DFK----------------------------------------------------------------------------- 498 (628)
Q Consensus 496 ~~~----------------------------------------------------------------------------- 498 (628)
+..
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~ 219 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLS 219 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------C
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCcccccccc
Confidence 210
Q ss_pred -----ccccccccccccCcccccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHH
Q 037488 499 -----ADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWV 573 (628)
Q Consensus 499 -----~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~ 573 (628)
+|||+|+.+............+||++|||||++.+..|+.++|||||||++|||+||+.||.....+..
T Consensus 220 ~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~------ 293 (365)
T 3e7e_A 220 AGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC------ 293 (365)
T ss_dssp TTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE------
T ss_pred CCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce------
Confidence 399999765433223334566899999999999999999999999999999999999999864322110
Q ss_pred HhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCC
Q 037488 574 NDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNA 625 (628)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~ 625 (628)
....... . ...+..+.+++.+|++.+|.+|++.
T Consensus 294 ----------~~~~~~~-~--------~~~~~~~~~~~~~~l~~~p~~r~~~ 326 (365)
T 3e7e_A 294 ----------KPEGLFR-R--------LPHLDMWNEFFHVMLNIPDCHHLPS 326 (365)
T ss_dssp ----------EECSCCT-T--------CSSHHHHHHHHHHHHCCCCTTCCCC
T ss_pred ----------eechhcc-c--------cCcHHHHHHHHHHHcCCCCCCcchH
Confidence 0011000 0 0124567899999999999999653
No 330
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.1e-21 Score=190.60 Aligned_cols=179 Identities=26% Similarity=0.301 Sum_probs=123.2
Q ss_pred CCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC-CccCCCCCcEEEcC
Q 037488 184 KLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TLLNLKDILYLNLS 262 (628)
Q Consensus 184 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~ 262 (628)
..++++++++.++ .+|..+. ++++.|++++|.+++..+..|..+++|++|+|++|.++.++. .+..+++|++|+++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3456777777766 3444443 467777777777776666667777777777777777776544 35567777777777
Q ss_pred CCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccC
Q 037488 263 SNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGII 342 (628)
Q Consensus 263 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 342 (628)
+|.+++..+..|..+++|++|+|++|++++..+..+..+++|++|+|++|++++..+..|..+++|+.|++++|.++++.
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 77777666666677777777777777777666666667777777777777777655556777777777777777777666
Q ss_pred chhhhcCCCCCEEEccCCcceec
Q 037488 343 PISLEKLLDLKDINVSFNKLEGE 365 (628)
Q Consensus 343 ~~~~~~l~~L~~l~l~~N~l~~~ 365 (628)
+..+..+++|+.|++++|++.+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 66677777777777777777655
No 331
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2e-24 Score=224.17 Aligned_cols=138 Identities=22% Similarity=0.269 Sum_probs=68.4
Q ss_pred cccCCCCCCEEEccCCcCCc----cccccccCCCCCCEeecccCcccccCCcccc----CC---------CCCCEEEccC
Q 037488 154 EISNLTNLIAIYLGGNKLNG----SIPIALGKLQKLQLLNLEYNQLEGSIPDDLC----RL---------AALFQLDLGS 216 (628)
Q Consensus 154 ~~~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~----~l---------~~L~~L~L~~ 216 (628)
.+..+++|++|+|++|.+.. .+|..+..+++|++|+|++|.+....+..+. .+ ++|++|++++
T Consensus 89 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 89 ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 34455666666666666654 3455556666666666666666433222222 22 5666666666
Q ss_pred CcCc-ccCC---CCccCCCCCcEEEccCCcCCc------CCCCccCCCCCcEEEcCCCCCc----CCCCCcccCCccccE
Q 037488 217 NKLS-GFVP---ASFGNLTNLRSLHLGSNQITS------IPSTLLNLKDILYLNLSSNFFT----GPLPLEIGNLKVLIK 282 (628)
Q Consensus 217 n~l~-~~~~---~~~~~l~~L~~L~L~~n~l~~------lp~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~l~~L~~ 282 (628)
|+++ ...+ ..+..+++|++|++++|.++. +|..+..+++|++|++++|.++ ..+|..+..+++|+.
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~ 248 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRE 248 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCE
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCE
Confidence 6654 1222 234455556666666655541 2224444445555555555443 223333444444444
Q ss_pred EEcCCCcCC
Q 037488 283 IDLSMNNFS 291 (628)
Q Consensus 283 L~Ls~N~l~ 291 (628)
|+|++|.++
T Consensus 249 L~L~~n~i~ 257 (386)
T 2ca6_A 249 LGLNDCLLS 257 (386)
T ss_dssp EECTTCCCC
T ss_pred EECCCCCCc
Confidence 444444443
No 332
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.88 E-value=8.1e-24 Score=213.68 Aligned_cols=183 Identities=20% Similarity=0.267 Sum_probs=127.3
Q ss_pred hhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCcc----
Q 037488 425 ATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFK---- 498 (628)
Q Consensus 425 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~---- 498 (628)
..++|...+.||+|+||.||+|+... .||+|+++... ....+.+.+|+.++++++||||+++++++..++..
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 35778889999999999999998753 49999986532 22345678899999999999999999987654311
Q ss_pred --------------------------------------------------------------ccccccccccccC---cc
Q 037488 499 --------------------------------------------------------------ADFGMAKPLLKED---QS 513 (628)
Q Consensus 499 --------------------------------------------------------------~DFGla~~~~~~~---~~ 513 (628)
+|||+|+...... ..
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~ 188 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRRE 188 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------C
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccc
Confidence 3999987542211 11
Q ss_pred cccccccccccccCcccccc---------CccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCcccee
Q 037488 514 LIQTQTLATIGYMAPEYGRE---------GRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKV 584 (628)
Q Consensus 514 ~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (628)
.......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... ..........
T Consensus 189 ~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-----~~~~~~~~~~---- 259 (319)
T 2y4i_B 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE-----AIIWQMGTGM---- 259 (319)
T ss_dssp CSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH-----HHHHHHHTTC----
T ss_pred cccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHhccCC----
Confidence 12233469999999999874 45799999999999999999999999753211 1111110000
Q ss_pred ecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCCC
Q 037488 585 VDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKEI 628 (628)
Q Consensus 585 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ev 628 (628)
.+. ..+..++.++.+++.+||+.||++|||+.|+
T Consensus 260 -~~~---------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l 293 (319)
T 2y4i_B 260 -KPN---------LSQIGMGKEISDILLFCWAFEQEERPTFTKL 293 (319)
T ss_dssp -CCC---------CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHH
T ss_pred -CCC---------CCcCCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 000 0011234458999999999999999998753
No 333
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=4e-22 Score=199.66 Aligned_cols=192 Identities=27% Similarity=0.446 Sum_probs=137.7
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 32 LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 32 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
+++|++|++++|.++. +| .+..+++|+.|+|++|+++++.+ |.++++|+.|++++|.++.+ ..+..+++
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-------~~~~~l~~ 108 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-------SAIAGLQS 108 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-------GGGTTCTT
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-------hhhcCCCC
Confidence 5567777777777764 33 46778888888888888877655 78888888888888887764 24677788
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecc
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 191 (628)
|++|++++|.++++. .+..+++|+.|++++|.+++..+ +..+++|++|+++
T Consensus 109 L~~L~l~~n~l~~~~---------------------------~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~ 159 (308)
T 1h6u_A 109 IKTLDLTSTQITDVT---------------------------PLAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIG 159 (308)
T ss_dssp CCEEECTTSCCCCCG---------------------------GGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECC
T ss_pred CCEEECCCCCCCCch---------------------------hhcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEcc
Confidence 888888888776421 14566777777777777765433 6677777777777
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcC
Q 037488 192 YNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTG 268 (628)
Q Consensus 192 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~ 268 (628)
+|++.+..+ +..+++|+.|++++|++++..+ +..+++|+.|++++|+++.+++ +..+++|++|++++|.+++
T Consensus 160 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 160 NAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEEC
T ss_pred CCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeec
Confidence 777765332 7777777777777777775443 6777778888888887777763 6677778888888877764
No 334
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=8.8e-22 Score=201.13 Aligned_cols=240 Identities=20% Similarity=0.147 Sum_probs=128.5
Q ss_pred CEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccce
Q 037488 60 SRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEI 139 (628)
Q Consensus 60 ~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~ 139 (628)
++++.++++++.+ |..+ .+++++|+|++|+|+.+++. +|.++++|++|+|++|++.+.+|
T Consensus 12 ~~v~C~~~~Lt~i-P~~l--~~~l~~L~Ls~N~i~~i~~~-----~f~~l~~L~~L~Ls~N~i~~~i~------------ 71 (350)
T 4ay9_X 12 RVFLCQESKVTEI-PSDL--PRNAIELRFVLTKLRVIQKG-----AFSGFGDLEKIEISQNDVLEVIE------------ 71 (350)
T ss_dssp TEEEEESTTCCSC-CTTC--CTTCSEEEEESCCCSEECTT-----SSTTCTTCCEEEEECCTTCCEEC------------
T ss_pred CEEEecCCCCCcc-CcCc--CCCCCEEEccCCcCCCcCHH-----HHcCCCCCCEEECcCCCCCCccC------------
Confidence 4566677777654 3333 24677777777777765542 46677777777777776643322
Q ss_pred eeccCCcccccCCccccCCCCCCE-EEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccC-C
Q 037488 140 FWMHSCNISGGIPEEISNLTNLIA-IYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGS-N 217 (628)
Q Consensus 140 l~l~~n~~~~~~~~~~~~l~~L~~-L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n 217 (628)
+..|.+++++.. +.+++|++....|..|..+++|++|++++|++....+..+....++..|++.+ +
T Consensus 72 ------------~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 72 ------------ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp ------------TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred ------------hhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 123444444433 34444555544455555556666666666655544444444455555555543 4
Q ss_pred cCcccCCCCccCCC-CCcEEEccCCcCCcCCCCccCCCCCcEEEcCC-CCCcCCCCCcccCCccccEEEcCCCcCCCCCc
Q 037488 218 KLSGFVPASFGNLT-NLRSLHLGSNQITSIPSTLLNLKDILYLNLSS-NFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIP 295 (628)
Q Consensus 218 ~l~~~~~~~~~~l~-~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p 295 (628)
++....+..|..+. .++.|+|++|+|+++|..++...+|++|++++ |.++...+..|..+++|+.|++++|+++...+
T Consensus 140 ~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~ 219 (350)
T 4ay9_X 140 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPS 219 (350)
T ss_dssp TCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCS
T ss_pred ccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccCh
Confidence 45544444555543 45666666666666666555555666666653 44554444555666666666666666654333
Q ss_pred cccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcC
Q 037488 296 ITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSN 335 (628)
Q Consensus 296 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 335 (628)
.. +.+|+.|.+.++.-...+|. +..+++|+.+++++
T Consensus 220 ~~---~~~L~~L~~l~~~~l~~lP~-l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 220 YG---LENLKKLRARSTYNLKKLPT-LEKLVALMEASLTY 255 (350)
T ss_dssp SS---CTTCCEEECTTCTTCCCCCC-TTTCCSCCEEECSC
T ss_pred hh---hccchHhhhccCCCcCcCCC-chhCcChhhCcCCC
Confidence 22 33344444333322223332 44555555555543
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.88 E-value=4.5e-24 Score=219.33 Aligned_cols=212 Identities=20% Similarity=0.233 Sum_probs=118.0
Q ss_pred cccCCC-CCCEEEccCCcCCccccccccCC-----CCCCEeecccCcccccCCccc----cCC-CCCCEEEccCCcCccc
Q 037488 154 EISNLT-NLIAIYLGGNKLNGSIPIALGKL-----QKLQLLNLEYNQLEGSIPDDL----CRL-AALFQLDLGSNKLSGF 222 (628)
Q Consensus 154 ~~~~l~-~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~L~~n~l~~~~p~~~----~~l-~~L~~L~L~~n~l~~~ 222 (628)
.+..++ +|++|+|++|.+.+..+..+..+ ++|++|+|++|++.+..+..+ ..+ ++|++|++++|++++.
T Consensus 45 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 124 (362)
T 3goz_A 45 AFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSK 124 (362)
T ss_dssp HHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGS
T ss_pred HHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcH
Confidence 344455 56666666666655444444443 566666666666654443322 223 5666666666666544
Q ss_pred CCCCc----cC-CCCCcEEEccCCcCCc-----CCCCccCCC-CCcEEEcCCCCCcCCCCCccc----CC-ccccEEEcC
Q 037488 223 VPASF----GN-LTNLRSLHLGSNQITS-----IPSTLLNLK-DILYLNLSSNFFTGPLPLEIG----NL-KVLIKIDLS 286 (628)
Q Consensus 223 ~~~~~----~~-l~~L~~L~L~~n~l~~-----lp~~~~~l~-~L~~L~l~~n~l~~~~~~~~~----~l-~~L~~L~Ls 286 (628)
.+..+ .. .++|++|+|++|.++. ++..+..++ +|++|++++|.+++..+..+. .. ++|+.|+|+
T Consensus 125 ~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls 204 (362)
T 3goz_A 125 SSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLS 204 (362)
T ss_dssp CHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECT
T ss_pred HHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECC
Confidence 33322 22 2466666666666652 233333343 666777777766654443332 23 467777777
Q ss_pred CCcCCCC----CccccCC-CCCCCEEeCCCCcCcccCC----hhhcCCCCCCEEECcCCcccccCc-------hhhhcCC
Q 037488 287 MNNFSGV----IPITIGY-LKDLQYLFLEYNRLQGSIP----DSIGDLINLKSLDLSNNNLSGIIP-------ISLEKLL 350 (628)
Q Consensus 287 ~N~l~~~----~p~~~~~-l~~L~~L~l~~n~~~~~~~----~~~~~l~~L~~L~l~~N~l~~~~~-------~~~~~l~ 350 (628)
+|.++.. ++..+.. .++|++|+|++|.++...+ ..+..+++|+.|++++|.+.++.+ ..+..++
T Consensus 205 ~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~ 284 (362)
T 3goz_A 205 ANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQ 284 (362)
T ss_dssp TSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCC
T ss_pred CCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCC
Confidence 7776642 2223333 3467777777777765433 234556777777777777544332 2345566
Q ss_pred CCCEEEccCCcceec
Q 037488 351 DLKDINVSFNKLEGE 365 (628)
Q Consensus 351 ~L~~l~l~~N~l~~~ 365 (628)
+|+.|++++|++...
T Consensus 285 ~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 285 KIILVDKNGKEIHPS 299 (362)
T ss_dssp EEEEECTTSCBCCGG
T ss_pred ceEEEecCCCcCCCc
Confidence 777778888876644
No 336
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=5.6e-22 Score=202.57 Aligned_cols=240 Identities=20% Similarity=0.218 Sum_probs=132.5
Q ss_pred CEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcE-
Q 037488 36 EELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKY- 114 (628)
Q Consensus 36 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~- 114 (628)
++++.++++++. +|..+ .+++++|+|++|+|+.+.+++|.++++|++|+|++|++.+..+. ..|.++++|+.
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~----~~f~~L~~l~~~ 84 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA----DVFSNLPKLHEI 84 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT----TSBCSCTTCCEE
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh----hHhhcchhhhhh
Confidence 456677777763 45444 35678888888888877777888888888888888877543221 24666666554
Q ss_pred EEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeeccc-C
Q 037488 115 FSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY-N 193 (628)
Q Consensus 115 L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~-n 193 (628)
+.+++|+++.+. |..|..+++|+.|++++|++....+..+....++..|++.+ +
T Consensus 85 l~~~~N~l~~l~-------------------------~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~ 139 (350)
T 4ay9_X 85 RIEKANNLLYIN-------------------------PEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNI 139 (350)
T ss_dssp EEEEETTCCEEC-------------------------TTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCT
T ss_pred hcccCCcccccC-------------------------chhhhhccccccccccccccccCCchhhcccchhhhhhhcccc
Confidence 444455555333 34445555555555555555544444444444555555543 3
Q ss_pred cccccCCccccCCC-CCCEEEccCCcCcccCCCCccCCCCCcEEEcc-CCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCC
Q 037488 194 QLEGSIPDDLCRLA-ALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG-SNQITSIPST-LLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 194 ~l~~~~p~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~-~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~ 270 (628)
++....+..|..+. .++.|+|++|+|+.+.+..| ...+|+.|+++ +|.++.+|.. +..+++|++|++++|+++..+
T Consensus 140 ~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f-~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp 218 (350)
T 4ay9_X 140 NIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAF-NGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 218 (350)
T ss_dssp TCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSS-TTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCC
T ss_pred ccccccccchhhcchhhhhhccccccccCCChhhc-cccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccC
Confidence 44444444444443 45556666666654443333 23456666664 3555566543 345566666666666666544
Q ss_pred CCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
+..|.++++|+.+++ +.+. .+| .+..+++|+.++++++
T Consensus 219 ~~~~~~L~~L~~l~~--~~l~-~lP-~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 219 SYGLENLKKLRARST--YNLK-KLP-TLEKLVALMEASLTYP 256 (350)
T ss_dssp SSSCTTCCEEECTTC--TTCC-CCC-CTTTCCSCCEEECSCH
T ss_pred hhhhccchHhhhccC--CCcC-cCC-CchhCcChhhCcCCCC
Confidence 444444433332221 2222 334 2455666666666554
No 337
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.87 E-value=2.2e-23 Score=217.81 Aligned_cols=171 Identities=12% Similarity=0.055 Sum_probs=119.9
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccC-CCcceeeee---------
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRH-RNLIKIISS--------- 491 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~~~--------- 491 (628)
+..|...+.||+|+||+||+|++ .+|+.||||++.... ....+.+.+|+.+++.++| +|......+
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 34567778999999999999996 679999999987432 2235678999999999987 221110000
Q ss_pred ------------ccCC--------------------------------C-------------------------------
Q 037488 492 ------------CSND--------------------------------D------------------------------- 496 (628)
Q Consensus 492 ------------~~~~--------------------------------~------------------------------- 496 (628)
+... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrD 236 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTY 236 (413)
T ss_dssp EECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSC
T ss_pred cccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 0000 0
Q ss_pred --------------ccccccccccccccCcccccccccccccccCcccc----------ccCccCcccchhhHhHHHHHH
Q 037488 497 --------------FKADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYG----------REGRVSTNGDVYSFGIMLIET 552 (628)
Q Consensus 497 --------------~~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DVwS~Gvvl~e~ 552 (628)
..+|||+|+..... ....+| +.|||||++ .+..|+.++|||||||++|||
T Consensus 237 iKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~el 310 (413)
T 3dzo_A 237 LRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWI 310 (413)
T ss_dssp CCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHH
T ss_pred cccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHH
Confidence 01499999864322 245678 999999999 566789999999999999999
Q ss_pred hhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCcccCCCCCC
Q 037488 553 FTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESPEERVNAKE 627 (628)
Q Consensus 553 ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~e 627 (628)
+||+.||....... ....... ....++.++.+++.+||+.||++|||+.|
T Consensus 311 ltg~~Pf~~~~~~~-----------------~~~~~~~--------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ 360 (413)
T 3dzo_A 311 WCADLPNTDDAALG-----------------GSEWIFR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQ 360 (413)
T ss_dssp HHSSCCCCTTGGGS-----------------CSGGGGS--------SCCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred HHCCCCCCCcchhh-----------------hHHHHHh--------hcccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 99999997532211 1111111 11134567999999999999999999754
No 338
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.87 E-value=8.5e-25 Score=240.65 Aligned_cols=126 Identities=14% Similarity=0.161 Sum_probs=85.5
Q ss_pred ccCCCCCCEEecCccC------------CCCCCEEEccCC-cceec-CCccccCCCCCCEEeccCCcccccCccccC---
Q 037488 16 IFNVSTLNSLYLQNVQ------------LQNLEELLLWGN-NFSGT-IPSFIFNASKLSRLELQMNSFYGFIPNTFG--- 78 (628)
Q Consensus 16 ~~~l~~L~~L~l~~n~------------l~~L~~L~ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~--- 78 (628)
+..+++|++|++++|. +++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+.
T Consensus 101 ~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~ 180 (594)
T 2p1m_B 101 SSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFP 180 (594)
T ss_dssp HHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSC
T ss_pred HHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHh
Confidence 3578899999999874 578999999998 45432 445556899999999999998775554443
Q ss_pred -CCCCCCEEEccCccccCCCCCCcccc-cccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCC
Q 037488 79 -NLRNLNRLGLNDNYLTSSTPKLNFLS-SLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSC 145 (628)
Q Consensus 79 -~l~~L~~L~L~~N~l~~~~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n 145 (628)
.+++|+.|++++|. ..+.. ..+. ...++++|++|++++|.-.+.++..+..++ .|+.+.+..+
T Consensus 181 ~~~~~L~~L~l~~~~-~~~~~--~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~-~L~~L~l~~~ 245 (594)
T 2p1m_B 181 DTYTSLVSLNISCLA-SEVSF--SALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAP-QLEELGTGGY 245 (594)
T ss_dssp TTCCCCCEEECTTCC-SCCCH--HHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCT-TCSEEECSBC
T ss_pred hcCCcCcEEEecccC-CcCCH--HHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCC-cceEcccccc
Confidence 67799999999886 21110 0111 124578999999998832222555565554 5777765443
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=2.7e-23 Score=211.43 Aligned_cols=250 Identities=20% Similarity=0.217 Sum_probs=190.9
Q ss_pred CCcEEEcccCCCCCCCchHHhcc-ccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCcc-ccccccCCCCCCEe
Q 037488 111 YLKYFSFSNNSLDGILPRAIGNL-SQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGS-IPIALGKLQKLQLL 188 (628)
Q Consensus 111 ~L~~L~l~~n~l~~~~p~~~~~l-~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~-~p~~~~~l~~L~~L 188 (628)
.++.+++++|.+. +..+..+ ...++.+++++|.+.+..+. +..+++|+.|++++|.+.+. ++..+..+++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L 123 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNL 123 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEE
Confidence 4677777777665 4444444 13577777777777766554 55788999999999988765 77778889999999
Q ss_pred ecccCcccccCCccccCCCCCCEEEccCC-cCccc-CCCCccCCCCCcEEEccCC-cCCc--CCCCccCCC-CCcEEEcC
Q 037488 189 NLEYNQLEGSIPDDLCRLAALFQLDLGSN-KLSGF-VPASFGNLTNLRSLHLGSN-QITS--IPSTLLNLK-DILYLNLS 262 (628)
Q Consensus 189 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n-~l~~~-~~~~~~~l~~L~~L~L~~n-~l~~--lp~~~~~l~-~L~~L~l~ 262 (628)
++++|.+.+..+..+..+++|++|++++| .+++. .+..+..+++|++|++++| .++. ++..+..++ +|++|+++
T Consensus 124 ~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~ 203 (336)
T 2ast_B 124 SLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS 203 (336)
T ss_dssp ECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC
T ss_pred eCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeC
Confidence 99999988777788888999999999998 67652 5556788899999999999 8875 566677788 99999999
Q ss_pred CC--CCc-CCCCCcccCCccccEEEcCCCc-CCCCCccccCCCCCCCEEeCCCCc-CcccCChhhcCCCCCCEEECcCCc
Q 037488 263 SN--FFT-GPLPLEIGNLKVLIKIDLSMNN-FSGVIPITIGYLKDLQYLFLEYNR-LQGSIPDSIGDLINLKSLDLSNNN 337 (628)
Q Consensus 263 ~n--~l~-~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~N~ 337 (628)
+| .++ +.++..+..+++|+.|++++|. +++..+..+..+++|++|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 99 444 3455667788999999999998 776777788889999999999995 32222235788999999999998
Q ss_pred ccccCchhhhcC-CCCCEEEccCCcceecCCC
Q 037488 338 LSGIIPISLEKL-LDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 338 l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~p~ 368 (628)
++. ..+..+ ..+..|++++|++++..|.
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~ 311 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARP 311 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCC
Confidence 443 233333 2366677899999987775
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=7.3e-24 Score=219.93 Aligned_cols=242 Identities=24% Similarity=0.240 Sum_probs=190.2
Q ss_pred ccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcC---Cccccccc-
Q 037488 104 SSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKL---NGSIPIAL- 179 (628)
Q Consensus 104 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l---~~~~p~~~- 179 (628)
..+..+++|++|+|++|.+....+..+ +..+..+++|+.|+|++|.+ .+.+|..+
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l---------------------~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~ 84 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWL---------------------SENIASKKDLEIAEFSDIFTGRVKDEIPEALR 84 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHH---------------------HHTTTTCTTCCEEECCSCCTTSCGGGSHHHHH
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHH---------------------HHHHHhCCCccEEeCcccccCccccchhHHHH
Confidence 345566777788877777664333222 23456788999999998644 44455444
Q ss_pred ------cCCCCCCEeecccCcccc----cCCccccCCCCCCEEEccCCcCcccCCCCc----cCC---------CCCcEE
Q 037488 180 ------GKLQKLQLLNLEYNQLEG----SIPDDLCRLAALFQLDLGSNKLSGFVPASF----GNL---------TNLRSL 236 (628)
Q Consensus 180 ------~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~----~~l---------~~L~~L 236 (628)
..+++|++|+|++|.+.. .+|..+..+++|++|+|++|.++...+..+ ..+ ++|++|
T Consensus 85 ~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L 164 (386)
T 2ca6_A 85 LLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSI 164 (386)
T ss_dssp HHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEE
T ss_pred HHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEE
Confidence 789999999999999986 467788899999999999999975443333 333 899999
Q ss_pred EccCCcCC--cCC---CCccCCCCCcEEEcCCCCCcC-----CCCCcccCCccccEEEcCCCcCC----CCCccccCCCC
Q 037488 237 HLGSNQIT--SIP---STLLNLKDILYLNLSSNFFTG-----PLPLEIGNLKVLIKIDLSMNNFS----GVIPITIGYLK 302 (628)
Q Consensus 237 ~L~~n~l~--~lp---~~~~~l~~L~~L~l~~n~l~~-----~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~ 302 (628)
++++|+++ .+| ..+..+++|++|++++|.++. ..+..+..+++|+.|+|++|.++ ..+|..+..++
T Consensus 165 ~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~ 244 (386)
T 2ca6_A 165 ICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP 244 (386)
T ss_dssp ECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT
T ss_pred ECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC
Confidence 99999997 345 456678899999999999872 34557889999999999999996 56777888999
Q ss_pred CCCEEeCCCCcCccc----CChhhcC--CCCCCEEECcCCcccc----cCchhh-hcCCCCCEEEccCCcceecC
Q 037488 303 DLQYLFLEYNRLQGS----IPDSIGD--LINLKSLDLSNNNLSG----IIPISL-EKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 303 ~L~~L~l~~n~~~~~----~~~~~~~--l~~L~~L~l~~N~l~~----~~~~~~-~~l~~L~~l~l~~N~l~~~~ 366 (628)
+|++|+|++|.+++. ++..+.. +++|+.|++++|.+++ .+|..+ ..+++|+.|++++|++++..
T Consensus 245 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 245 NLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp TCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred CcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 999999999999865 5666644 8999999999999997 366666 66899999999999988554
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=7.4e-23 Score=208.22 Aligned_cols=198 Identities=18% Similarity=0.231 Sum_probs=93.9
Q ss_pred CCEEEccCCcceecCCccccCC--CCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCC
Q 037488 35 LEELLLWGNNFSGTIPSFIFNA--SKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYL 112 (628)
Q Consensus 35 L~~L~ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 112 (628)
++.+++++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|+.|++++|.++... ....+..+++|
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~----~~~~~~~~~~L 120 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVST----LHGILSQCSKL 120 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHH----HHHHHTTBCCC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHH----HHHHHhhCCCC
Confidence 555666666554 3344444 5666666666666655444 334666666666666554210 11234555666
Q ss_pred cEEEcccCCCCCCCchHHhccccccceeeccCC-cccc-cCCccccCCCCCCEEEccCC-cCCcc-ccccccCCC-CCCE
Q 037488 113 KYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSC-NISG-GIPEEISNLTNLIAIYLGGN-KLNGS-IPIALGKLQ-KLQL 187 (628)
Q Consensus 113 ~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n-~~~~-~~~~~~~~l~~L~~L~L~~n-~l~~~-~p~~~~~l~-~L~~ 187 (628)
++|++++|.+++..+..+..++ .|+.|++++| .+++ .++..+..+++|+.|++++| .+++. ++..+..++ +|++
T Consensus 121 ~~L~L~~~~l~~~~~~~l~~~~-~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~ 199 (336)
T 2ast_B 121 QNLSLEGLRLSDPIVNTLAKNS-NLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQ 199 (336)
T ss_dssp SEEECTTCBCCHHHHHHHTTCT-TCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCE
T ss_pred CEEeCcCcccCHHHHHHHhcCC-CCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCE
Confidence 6666666655544444444332 3444444444 2332 13333444455555555555 44432 233344444 5555
Q ss_pred eecccCc--cc-ccCCccccCCCCCCEEEccCCc-CcccCCCCccCCCCCcEEEccCC
Q 037488 188 LNLEYNQ--LE-GSIPDDLCRLAALFQLDLGSNK-LSGFVPASFGNLTNLRSLHLGSN 241 (628)
Q Consensus 188 L~L~~n~--l~-~~~p~~~~~l~~L~~L~L~~n~-l~~~~~~~~~~l~~L~~L~L~~n 241 (628)
|++++|. ++ +.++..+..+++|+.|++++|. +++..+..+..+++|+.|++++|
T Consensus 200 L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 200 LNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp EECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred EEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 5555542 22 1223333444444455544444 33333334444444444444444
No 342
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.3e-22 Score=225.72 Aligned_cols=167 Identities=19% Similarity=0.209 Sum_probs=129.3
Q ss_pred hcCCCcccccccCCccEEEEEEec--CCcEEEEEEeecc-chhHHHHHHHHHHHhhcccCCCcceeeeeccCCCc-----
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIH--YGMEVAVKVFDLQ-YREAFKNFDIECDMMKHIRHRNLIKIISSCSNDDF----- 497 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~--~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 497 (628)
.++|...+.||+|+||.||+|.+. +|+.||||++... .......+.+|++++++++|||||+++++|...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 478999999999999999999874 6899999998643 33455678999999999999999999998764321
Q ss_pred -c--------------------------------------------------------------ccccccccccccCccc
Q 037488 498 -K--------------------------------------------------------------ADFGMAKPLLKEDQSL 514 (628)
Q Consensus 498 -~--------------------------------------------------------------~DFGla~~~~~~~~~~ 514 (628)
. +|||+++.....
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~---- 234 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF---- 234 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCC----
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccC----
Confidence 0 399999865322
Q ss_pred ccccccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcc
Q 037488 515 IQTQTLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQED 594 (628)
Q Consensus 515 ~~~~~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 594 (628)
...+||++|||||++.++ ++.++|||||||++|||++|.+||....... +..
T Consensus 235 --~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~----------------------~~~--- 286 (681)
T 2pzi_A 235 --GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYVDG----------------------LPE--- 286 (681)
T ss_dssp --SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEECSS----------------------CCT---
T ss_pred --CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccccc----------------------ccc---
Confidence 345799999999998765 4899999999999999999999876422111 000
Q ss_pred cchhchhhhHHHHHHHhhcccCCCcccCCCCC
Q 037488 595 KHFVIKGQCVSFVFNLAMKCTVESPEERVNAK 626 (628)
Q Consensus 595 ~~~~~~~~~~~~~~~l~~~cl~~dp~~Rpt~~ 626 (628)
.......+..+.+++.+||+.||++||+..
T Consensus 287 --~~~~~~~~~~l~~li~~~l~~dP~~R~~~~ 316 (681)
T 2pzi_A 287 --DDPVLKTYDSYGRLLRRAIDPDPRQRFTTA 316 (681)
T ss_dssp --TCHHHHHCHHHHHHHHHHTCSSGGGSCSSH
T ss_pred --cccccccCHHHHHHHhhhccCChhhCCCHH
Confidence 001112345689999999999999999754
No 343
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.85 E-value=5.8e-22 Score=196.24 Aligned_cols=181 Identities=11% Similarity=0.018 Sum_probs=122.0
Q ss_pred hcCCCcccccccCCccEEEEEEe-cCCcEEEEEEeeccc---hhHHHHHHHHHHHhhcccCCCcceeeeeccCCCccc--
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQY---REAFKNFDIECDMMKHIRHRNLIKIISSCSNDDFKA-- 499 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-- 499 (628)
.++|...+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++..++...
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 36789999999999999999997 569999999997542 344577899999999999999999999987654320
Q ss_pred -------------------------------------cccccccccccCccc---ccccccccccccCccccccCccCcc
Q 037488 500 -------------------------------------DFGMAKPLLKEDQSL---IQTQTLATIGYMAPEYGREGRVSTN 539 (628)
Q Consensus 500 -------------------------------------DFGla~~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~ 539 (628)
+-|+.+.-....... .....+++.+|++| ++.+
T Consensus 110 ~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~~~~-------~~~~ 182 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPATMPD-------ANPQ 182 (286)
T ss_dssp EECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCCCTT-------CCHH
T ss_pred EEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccccCC-------CCch
Confidence 112221100000000 00112356677764 7899
Q ss_pred cchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhhcccCCCc
Q 037488 540 GDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAMKCTVESP 619 (628)
Q Consensus 540 ~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~dp 619 (628)
+|||||||++|||+||+.||.+...... ..................+..++.++.+++.+||+.||
T Consensus 183 ~Di~slG~il~elltg~~Pf~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP 248 (286)
T 3uqc_A 183 DDIRGIGASLYALLVNRWPLPEAGVRSG--------------LAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDG 248 (286)
T ss_dssp HHHHHHHHHHHHHHHSEECSCCCSBCCC--------------SEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTS
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCcchh--------------hHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCC
Confidence 9999999999999999999976432110 00000111111111122334567889999999999999
Q ss_pred ccCCCCCCC
Q 037488 620 EERVNAKEI 628 (628)
Q Consensus 620 ~~Rpt~~ev 628 (628)
++| |+.|+
T Consensus 249 ~~R-s~~el 256 (286)
T 3uqc_A 249 GIR-SASTL 256 (286)
T ss_dssp SCC-CHHHH
T ss_pred ccC-CHHHH
Confidence 999 98653
No 344
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=5.4e-23 Score=226.26 Aligned_cols=344 Identities=16% Similarity=0.143 Sum_probs=206.5
Q ss_pred hccCCCCCCEEecCccC--------------------------CCCCCEEEccCCcceecCCcccc-CCCCCCEEeccCC
Q 037488 15 TIFNVSTLNSLYLQNVQ--------------------------LQNLEELLLWGNNFSGTIPSFIF-NASKLSRLELQMN 67 (628)
Q Consensus 15 ~~~~l~~L~~L~l~~n~--------------------------l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~L~~N 67 (628)
.+..++.|+.|+++++. +++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 45677899999998752 45899999999999877666665 6899999999999
Q ss_pred -ccccc-CccccCCCCCCCEEEccCccccCCCCCCcccc-cccCCCCCcEEEcccCCCCCCCchHHhcc---ccccceee
Q 037488 68 -SFYGF-IPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLS-SLSNCKYLKYFSFSNNSLDGILPRAIGNL---SQSMEIFW 141 (628)
Q Consensus 68 -~l~~~-~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l---~~~l~~l~ 141 (628)
.++.. .+..+.++++|++|+|++|.++..... .+. ....+++|++|++++|. ..+....+..+ ...|+.|+
T Consensus 141 ~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~--~l~~~~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~ 217 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCRNLKELDLRESDVDDVSGH--WLSHFPDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLK 217 (594)
T ss_dssp EEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGG--GGGGSCTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchH--HHHHHhhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEe
Confidence 45432 334455899999999999998764321 122 23478899999999997 32333333322 24799999
Q ss_pred ccCCcccccCCccccCCCCCCEEEccCCcC-------Cc-----------------------cccccccCCCCCCEeecc
Q 037488 142 MHSCNISGGIPEEISNLTNLIAIYLGGNKL-------NG-----------------------SIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 142 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l-------~~-----------------------~~p~~~~~l~~L~~L~L~ 191 (628)
+++|...+.++..+..+++|+.|+++.+.. .+ .++..+..+++|++|+++
T Consensus 218 L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~ 297 (594)
T 2p1m_B 218 LNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLS 297 (594)
T ss_dssp CCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECT
T ss_pred cCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccchhhHHHHHHhhCCCCEEEcc
Confidence 999844444777788888888888655421 11 122222245566666666
Q ss_pred cCcccccCC-ccccCCCCCCEEEccCCcCccc-CCCCccCCCCCcEEEccC---------CcCCc--CCCCccCCCCCcE
Q 037488 192 YNQLEGSIP-DDLCRLAALFQLDLGSNKLSGF-VPASFGNLTNLRSLHLGS---------NQITS--IPSTLLNLKDILY 258 (628)
Q Consensus 192 ~n~l~~~~p-~~~~~l~~L~~L~L~~n~l~~~-~~~~~~~l~~L~~L~L~~---------n~l~~--lp~~~~~l~~L~~ 258 (628)
+|.+.+... ..+..+++|+.|++++| +... .+.....+++|+.|++++ +.++. +..-...+++|++
T Consensus 298 ~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~ 376 (594)
T 2p1m_B 298 YATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLES 376 (594)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCE
T ss_pred CCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHH
Confidence 666543211 12345666666666655 3211 111222356666666622 33332 1111112566666
Q ss_pred EEcCCCCCcCCCCCccc-CCccccEEEcC--C----CcCCCCC-----ccccCCCCCCCEEeCCCCcCcccCChhhcC-C
Q 037488 259 LNLSSNFFTGPLPLEIG-NLKVLIKIDLS--M----NNFSGVI-----PITIGYLKDLQYLFLEYNRLQGSIPDSIGD-L 325 (628)
Q Consensus 259 L~l~~n~l~~~~~~~~~-~l~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~-l 325 (628)
|.+..|.+++.....+. .+++|+.|+++ + |.++... +..+..+++|+.|++++ .++...+..+.. +
T Consensus 377 L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~ 455 (594)
T 2p1m_B 377 VLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYA 455 (594)
T ss_dssp EEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHC
T ss_pred HHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhc
Confidence 66666666543333332 45667777776 3 3444211 11134566777777765 444433334443 6
Q ss_pred CCCCEEECcCCcccccCchhh-hcCCCCCEEEccCCcce
Q 037488 326 INLKSLDLSNNNLSGIIPISL-EKLLDLKDINVSFNKLE 363 (628)
Q Consensus 326 ~~L~~L~l~~N~l~~~~~~~~-~~l~~L~~l~l~~N~l~ 363 (628)
++|+.|++++|.+++.....+ ..+++|+.|++++|+++
T Consensus 456 ~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 456 KKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp TTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCC
T ss_pred hhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCc
Confidence 677777777777654433333 55677777777777664
No 345
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.8e-20 Score=174.23 Aligned_cols=157 Identities=25% Similarity=0.275 Sum_probs=69.2
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEcc
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
+|+.|++++|++++..+..+..+++|++|++++|++.+..+..|..+++|++|++++|++++..+..|..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44444455444443333334444444444444444443333334444444444444444444433344444444444444
Q ss_pred CCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccC
Q 037488 240 SNQITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSI 318 (628)
Q Consensus 240 ~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~ 318 (628)
+|+++.+|.. +..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+ .+++|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCcee
Confidence 4444444332 2334444444444444444333334444444444444443331 2233444444444444444
Q ss_pred Chhhc
Q 037488 319 PDSIG 323 (628)
Q Consensus 319 ~~~~~ 323 (628)
|..++
T Consensus 182 p~~~~ 186 (208)
T 2o6s_A 182 RNSAG 186 (208)
T ss_dssp BCTTS
T ss_pred eccCc
Confidence 44433
No 346
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=6.4e-20 Score=197.05 Aligned_cols=167 Identities=26% Similarity=0.334 Sum_probs=95.5
Q ss_pred CCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEc
Q 037488 159 TNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHL 238 (628)
Q Consensus 159 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 238 (628)
++|+.|+|++|+++ .+| ..+++|++|+|++|++++ +|. +.+ +|++|+|++|++++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 45666666666665 344 334566666666666654 444 433 56666666666655 333 4556666666
Q ss_pred cCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCC-------CEEeCCC
Q 037488 239 GSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDL-------QYLFLEY 311 (628)
Q Consensus 239 ~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~l~~ 311 (628)
++|.|+.+|. .+++|++|++++|.+++ +|. |. ++|+.|+|++|.++ .+|. +.. +| +.|+|++
T Consensus 148 s~N~l~~lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 148 DNNQLTMLPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCCccCcCCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 6666666655 34566666666666665 333 43 56666666666666 3333 332 45 6666666
Q ss_pred CcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcC
Q 037488 312 NRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKL 349 (628)
Q Consensus 312 n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 349 (628)
|+++ .+|..+..+++|+.|++++|.+++..|..+..+
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 6666 455555556666666666666666666555543
No 347
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.4e-20 Score=173.81 Aligned_cols=149 Identities=28% Similarity=0.333 Sum_probs=78.7
Q ss_pred EEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCc
Q 037488 163 AIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQ 242 (628)
Q Consensus 163 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 242 (628)
.++++++.++ .+|..+ .++|++|++++|++.+..+..|..+++|++|++++|++++..+..|..+++|++|++++|+
T Consensus 11 ~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 87 (208)
T 2o6s_A 11 TVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQ 87 (208)
T ss_dssp EEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCc
Confidence 4455555554 233322 3456666666666665544455566666666666666665555555556666666666666
Q ss_pred CCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcC
Q 037488 243 ITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314 (628)
Q Consensus 243 l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 314 (628)
++.+|.. +..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|++|++++|.+
T Consensus 88 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 160 (208)
T 2o6s_A 88 LQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 160 (208)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCB
T ss_pred CCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCe
Confidence 5555443 33455555555555555544444445555555555555555444443444444444555444444
No 348
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.83 E-value=1.1e-19 Score=195.18 Aligned_cols=182 Identities=25% Similarity=0.304 Sum_probs=155.5
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEcc
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
+|+.|++++|.+++ +|..+ +++|++|+|++|+++ .+| ..+++|+.|++++|++++ +|. +.. +|+.|+|+
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 89999999999986 66655 378999999999998 566 457899999999999997 565 665 99999999
Q ss_pred CCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCC
Q 037488 240 SNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319 (628)
Q Consensus 240 ~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 319 (628)
+|+|+.+|. .+++|++|++++|.+++ +|. .+++|+.|+|++|.+++ +|. +. ++|+.|+|++|+++ .+|
T Consensus 129 ~N~l~~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp 196 (571)
T 3cvr_A 129 NNQLTMLPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLP 196 (571)
T ss_dssp SSCCSCCCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCC
T ss_pred CCcCCCCCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chh
Confidence 999999998 67999999999999997 444 57899999999999997 555 65 89999999999998 666
Q ss_pred hhhcCCCCC-------CEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCCC
Q 037488 320 DSIGDLINL-------KSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 320 ~~~~~l~~L-------~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
. +.. +| +.|++++|.|+. +|..+..+++|+.|++++|++++.+|.
T Consensus 197 ~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 197 A-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp C-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred h-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 6 654 77 999999999995 566677799999999999999987764
No 349
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.82 E-value=7.8e-21 Score=189.80 Aligned_cols=184 Identities=12% Similarity=0.102 Sum_probs=110.5
Q ss_pred cCCCcc-cccccCCccEEEEEEe-cCCcEEEEEEeeccchhHHHHHHHHHHHh-hcccCCCcceeeeeccC----CCcc-
Q 037488 427 NGFSEN-NLIDRGGIGYVYKRRI-HYGMEVAVKVFDLQYREAFKNFDIECDMM-KHIRHRNLIKIISSCSN----DDFK- 498 (628)
Q Consensus 427 ~~~~~~-~~ig~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~----~~~~- 498 (628)
++|... +.||+|+||.||+|.. .+++.||||+++.. ..+.+|++++ +..+||||+++++++.. +...
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456665 7799999999999987 67999999999642 3467888888 55699999999998754 1110
Q ss_pred -----c-------------------------------------cccccccccccCccccc----ccccccccccCccccc
Q 037488 499 -----A-------------------------------------DFGMAKPLLKEDQSLIQ----TQTLATIGYMAPEYGR 532 (628)
Q Consensus 499 -----~-------------------------------------DFGla~~~~~~~~~~~~----~~~~gt~~y~aPE~~~ 532 (628)
+ +-|+.+.-......... ...+--..|-..+...
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 171 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT 171 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc
Confidence 0 11111110000000000 0000000111122334
Q ss_pred cCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHhh
Q 037488 533 EGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLAM 612 (628)
Q Consensus 533 ~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 612 (628)
+..|+.++||||+||++|||++|+.||........ ...................+..++.++.+++.
T Consensus 172 ~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 238 (299)
T 3m2w_A 172 GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-------------SPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIR 238 (299)
T ss_dssp TCGGGGHHHHHHHHHHHHHHHHSSCSCCC--------------------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHH
T ss_pred cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-------------hHHHHHHHhhccccCCchhcccCCHHHHHHHH
Confidence 56799999999999999999999999965322110 00000111111111112223456788999999
Q ss_pred cccCCCcccCCCCCCC
Q 037488 613 KCTVESPEERVNAKEI 628 (628)
Q Consensus 613 ~cl~~dp~~Rpt~~ev 628 (628)
+||+.||++|||+.|+
T Consensus 239 ~~l~~dP~~Rps~~e~ 254 (299)
T 3m2w_A 239 NLLKTEPTQRMTITEF 254 (299)
T ss_dssp HHTCSSTTTSCCHHHH
T ss_pred HHcccChhhCCCHHHH
Confidence 9999999999998763
No 350
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.2e-19 Score=179.94 Aligned_cols=170 Identities=26% Similarity=0.351 Sum_probs=85.2
Q ss_pred CCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEE
Q 037488 157 NLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSL 236 (628)
Q Consensus 157 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 236 (628)
.+++|+.|++++|.+... + .+..+++|++|++++|++.+..+ +.++++|++|++++|++++. ..+..+++|+.|
T Consensus 44 ~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L 117 (291)
T 1h6t_A 44 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL--SSLKDLKKLKSL 117 (291)
T ss_dssp HHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG--GGGTTCTTCCEE
T ss_pred hcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC--hhhccCCCCCEE
Confidence 444555555555555432 2 24445555555555555543322 44555555555555555432 124444455555
Q ss_pred EccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcc
Q 037488 237 HLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQG 316 (628)
Q Consensus 237 ~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 316 (628)
++++|+++.++ .+..+++|+.|++++|.+++. ..++.+++|+.|++++|++++
T Consensus 118 ~L~~n~i~~~~-------------------------~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~ 170 (291)
T 1h6t_A 118 SLEHNGISDIN-------------------------GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD 170 (291)
T ss_dssp ECTTSCCCCCG-------------------------GGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC
T ss_pred ECCCCcCCCCh-------------------------hhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc
Confidence 55554444442 344455555555555555433 334455555555555555553
Q ss_pred cCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcce
Q 037488 317 SIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 317 ~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
..+ +..+++|+.|++++|.++++ + .+..+++|+.|++++|++.
T Consensus 171 ~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 171 IVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred chh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 332 55555566666666655543 2 2555566666666666554
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.7e-19 Score=171.11 Aligned_cols=154 Identities=22% Similarity=0.261 Sum_probs=101.4
Q ss_pred EEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC--CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCC
Q 037488 211 QLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS--TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMN 288 (628)
Q Consensus 211 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N 288 (628)
.+++++|.++. +|..+. ..++.|+|++|+++.++. .+..+++|++|++++|.+++..+..|..+++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 45555555543 233222 234556666666655522 2445666666666666666655566677777777777777
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 289 NFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 289 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
.+++..+..|..+++|++|+|++|++++..|..|..+++|+.|++++|.++++.|..|..+++|+.|++++|++.+..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 7776666667777777777777777776667777777777777777777777777777777777777887777776554
No 352
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=2.3e-19 Score=183.89 Aligned_cols=178 Identities=27% Similarity=0.277 Sum_probs=99.6
Q ss_pred CEEEccCCcCCccccccccCCCCCCEeecccCcccccCCcccc-CCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccC
Q 037488 162 IAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLC-RLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGS 240 (628)
Q Consensus 162 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 240 (628)
+.++++++.++ .+|..+. +.++.|+|++|++++..+..+. ++++|++|+|++|+|++..+..|..+++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 35566666665 3443332 2355566666665555444444 555555555555555555555555555555555555
Q ss_pred CcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCCh
Q 037488 241 NQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPD 320 (628)
Q Consensus 241 n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~ 320 (628)
|+|+.+ .+..|..+++|+.|+|++|++++..|..|..+++|+.|+|++|++++..+.
T Consensus 98 N~l~~~-----------------------~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~ 154 (361)
T 2xot_A 98 NHLHTL-----------------------DEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVE 154 (361)
T ss_dssp SCCCEE-----------------------CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGG
T ss_pred CcCCcC-----------------------CHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHH
Confidence 555544 344445555555555555555555555555555566666666665543333
Q ss_pred hh---cCCCCCCEEECcCCcccccCchhhhcCCC--CCEEEccCCcceec
Q 037488 321 SI---GDLINLKSLDLSNNNLSGIIPISLEKLLD--LKDINVSFNKLEGE 365 (628)
Q Consensus 321 ~~---~~l~~L~~L~l~~N~l~~~~~~~~~~l~~--L~~l~l~~N~l~~~ 365 (628)
.| ..+++|+.|+|++|.|+++.+..+..++. ++.|++++|++.+.
T Consensus 155 ~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 155 LIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp GTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred HhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 33 45667777777777777666566666665 36777777777654
No 353
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=7.4e-19 Score=166.63 Aligned_cols=150 Identities=26% Similarity=0.327 Sum_probs=85.0
Q ss_pred CEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCC
Q 037488 162 IAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSN 241 (628)
Q Consensus 162 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 241 (628)
+.++++++.++ .+|..+. ++|+.|++++|++.+..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 35666666665 3444332 46666777777666655556666666666666666666666666666666666666666
Q ss_pred cCCcCCCCc-cCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcC
Q 037488 242 QITSIPSTL-LNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314 (628)
Q Consensus 242 ~l~~lp~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 314 (628)
+|+.+|..+ ..+++|++|++++|.+++..|..|..+++|+.|+|++|.+++..+..+..+++|++|++++|++
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 666665442 3455555555555555554444555555555555555555444444444444444444444443
No 354
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=2e-19 Score=178.34 Aligned_cols=189 Identities=28% Similarity=0.363 Sum_probs=136.6
Q ss_pred CCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeec
Q 037488 111 YLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNL 190 (628)
Q Consensus 111 ~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 190 (628)
.+..+.+..+.+.+..+. ..+. .++.+++++|.+... + .+..+++|+.|++++|++++..+ +..+++|++|++
T Consensus 25 ~~~~~~l~~~~~~~~~~~--~~l~-~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l 97 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVTQ--NELN-SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFL 97 (291)
T ss_dssp HHHHHHTTCSCTTSEECH--HHHH-TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HHHHHHhcCCCcccccch--hhcC-cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEEC
Confidence 344445666666654332 3343 689999999999865 3 58899999999999999997655 899999999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCC
Q 037488 191 EYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPL 270 (628)
Q Consensus 191 ~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~ 270 (628)
++|++.+. ..+..+++|++|++++|++++. +.+..+++|+.|++++|+++.+ ..+..+++|++|++++|.+++..
T Consensus 98 ~~n~l~~~--~~l~~l~~L~~L~L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~ 172 (291)
T 1h6t_A 98 DENKVKDL--SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIV 172 (291)
T ss_dssp CSSCCCCG--GGGTTCTTCCEEECTTSCCCCC--GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCG
T ss_pred CCCcCCCC--hhhccCCCCCEEECCCCcCCCC--hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccch
Confidence 99999853 3589999999999999999864 4688899999999999988877 45666667777777776666544
Q ss_pred CCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCc
Q 037488 271 PLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ 315 (628)
Q Consensus 271 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 315 (628)
+ +..+++|+.|++++|.+++. + .+..+++|+.|++++|+++
T Consensus 173 ~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 173 P--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp G--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEE
T ss_pred h--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCccc
Confidence 3 55555666666666655532 2 2444445555555554443
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=1.1e-18 Score=165.52 Aligned_cols=134 Identities=24% Similarity=0.295 Sum_probs=78.2
Q ss_pred CCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCC
Q 037488 232 NLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLE 310 (628)
Q Consensus 232 ~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 310 (628)
+|+.|++++|.|+.+|. .+..+++|++|++++|.+++..|..|.++++|++|+|++|.++...+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 44445555555544433 33444555555555555554445555555556666666666655444555556666666666
Q ss_pred CCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceec
Q 037488 311 YNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGE 365 (628)
Q Consensus 311 ~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~ 365 (628)
+|++++..|..|..+++|+.|++++|.++++.+..|..+++|+.|++++|++.+.
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 6666655566666666666666666666666655666666666677777666543
No 356
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.3e-19 Score=194.94 Aligned_cols=173 Identities=27% Similarity=0.359 Sum_probs=101.3
Q ss_pred cCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcE
Q 037488 156 SNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRS 235 (628)
Q Consensus 156 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 235 (628)
..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|++.+..+ +..+++|+.|+|++|.+.+. ..+..+++|+.
T Consensus 40 ~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~ 113 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL--SSLKDLKKLKS 113 (605)
T ss_dssp HHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC--TTSTTCTTCCE
T ss_pred hcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC--hhhccCCCCCE
Confidence 445566666666666653 22 35566666666666666654333 55666666666666666542 24566666666
Q ss_pred EEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCc
Q 037488 236 LHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQ 315 (628)
Q Consensus 236 L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~ 315 (628)
|+|++|.+..++ .+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..+++|+.|+|++|+++
T Consensus 114 L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~ 188 (605)
T 1m9s_A 114 LSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 188 (605)
T ss_dssp EECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred EEecCCCCCCCc-cccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCC
Confidence 666666666553 355566666666666666543 345566666666666666665444 555666666666666665
Q ss_pred ccCChhhcCCCCCCEEECcCCccccc
Q 037488 316 GSIPDSIGDLINLKSLDLSNNNLSGI 341 (628)
Q Consensus 316 ~~~~~~~~~l~~L~~L~l~~N~l~~~ 341 (628)
+. ..+..+++|+.|+|++|.+.+.
T Consensus 189 ~l--~~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 189 DL--RALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp BC--GGGTTCTTCSEEECCSEEEECC
T ss_pred CC--hHHccCCCCCEEEccCCcCcCC
Confidence 32 2355666666666666666543
No 357
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=4.2e-19 Score=182.00 Aligned_cols=155 Identities=26% Similarity=0.240 Sum_probs=106.0
Q ss_pred cceeeccCCcccccCCcccc-CCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEcc
Q 037488 137 MEIFWMHSCNISGGIPEEIS-NLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLG 215 (628)
Q Consensus 137 l~~l~l~~n~~~~~~~~~~~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 215 (628)
++.|++++|.+++..+..|. .+++|+.|+|++|++.+..+..|..+++|++|+|++|++.+..+..|.++++|++|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 34444444444444455555 67778888888888876666677778888888888888877666677778888888888
Q ss_pred CCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCc----cCCCCCcEEEcCCCCCcCCCCCcccCCcc--ccEEEcCCCc
Q 037488 216 SNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTL----LNLKDILYLNLSSNFFTGPLPLEIGNLKV--LIKIDLSMNN 289 (628)
Q Consensus 216 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~----~~l~~L~~L~l~~n~l~~~~~~~~~~l~~--L~~L~Ls~N~ 289 (628)
+|+|+...+..|..+++|+.|+|++|+|+.+|..+ ..+++|++|+|++|.++...+..+..++. ++.|+|++|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~ 200 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNP 200 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCC
Confidence 88887777777788888888888888887777654 34666677777777666555455555554 2556666665
Q ss_pred CC
Q 037488 290 FS 291 (628)
Q Consensus 290 l~ 291 (628)
+.
T Consensus 201 ~~ 202 (361)
T 2xot_A 201 LE 202 (361)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 358
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=6.1e-19 Score=191.63 Aligned_cols=192 Identities=23% Similarity=0.324 Sum_probs=166.1
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEcc
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLG 239 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 239 (628)
.+..+.++.+.+....+ +..+++|+.|++++|.+.. ++ .+..+++|+.|+|++|.+++..+ +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 34445666676665443 5678999999999999985 34 68999999999999999997655 8999999999999
Q ss_pred CCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCC
Q 037488 240 SNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP 319 (628)
Q Consensus 240 ~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~ 319 (628)
+|.++.+| .+..+++|++|+|++|.+++. ..+..+++|+.|+|++|.+++. ..++.+++|+.|+|++|++.+..|
T Consensus 96 ~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 96 ENKIKDLS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp SSCCCCCT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCCCh-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh
Confidence 99999987 688899999999999999864 4588999999999999999875 567899999999999999997666
Q ss_pred hhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecC
Q 037488 320 DSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 320 ~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
+..+++|+.|+|++|.++++ ..+..+++|+.|+|++|++.+..
T Consensus 171 --l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 171 --LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLNKP 213 (605)
T ss_dssp --GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEECCC
T ss_pred --hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcCCc
Confidence 89999999999999999875 35889999999999999998653
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=1.4e-18 Score=164.61 Aligned_cols=131 Identities=22% Similarity=0.253 Sum_probs=73.4
Q ss_pred CEEEccCCcCcccCC-CCccCCCCCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCC
Q 037488 210 FQLDLGSNKLSGFVP-ASFGNLTNLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSM 287 (628)
Q Consensus 210 ~~L~L~~n~l~~~~~-~~~~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 287 (628)
++|+|++|++++..+ ..|..+++|+.|+|++|+|+.++. .+..+++|++|++++|.+++..+..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 344444444443322 234444444445554444444433 344445555555555555554455555666666666666
Q ss_pred CcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 288 NNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 288 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
|++++..|..|..+++|++|+|++|++++..|..|..+++|+.|++++|.+..
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 66665556666666666666666666666656666666677777777776654
No 360
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=3.4e-18 Score=163.22 Aligned_cols=133 Identities=31% Similarity=0.359 Sum_probs=70.9
Q ss_pred CCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCC-ccCCCCCcEEEc
Q 037488 183 QKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST-LLNLKDILYLNL 261 (628)
Q Consensus 183 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~-~~~l~~L~~L~l 261 (628)
++|++|+|++|++.+..|..|..+++|++|+|++|+++...+..|..+++|+.|+|++|+|+.+|.. +..+++|++|++
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 4455555555555544444455555555555555555444444455555555555555555554433 234555555555
Q ss_pred CCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcc
Q 037488 262 SSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQG 316 (628)
Q Consensus 262 ~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~ 316 (628)
++|.++ .+|..+..+++|+.|+|++|++++..+..+..+++|+.|++++|++..
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 555555 334445555555556666665555544555556666666666666553
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=6.1e-18 Score=161.41 Aligned_cols=154 Identities=27% Similarity=0.371 Sum_probs=80.7
Q ss_pred CEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCC
Q 037488 186 QLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNF 265 (628)
Q Consensus 186 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~ 265 (628)
+.++.+++.+. .+|..+. ++|++|+|++|.+++..|..|..+++|+.|+|++|+++.+|
T Consensus 22 ~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~------------------ 80 (229)
T 3e6j_A 22 TTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP------------------ 80 (229)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------------------
T ss_pred CEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC------------------
Confidence 34555555554 3343322 45555555555555555555555555555555555555554
Q ss_pred CcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchh
Q 037488 266 FTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPIS 345 (628)
Q Consensus 266 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~ 345 (628)
+..|..+++|+.|+|++|++++..+..|..+++|++|++++|+++ .+|..+..+++|+.|++++|+++++.+..
T Consensus 81 -----~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~ 154 (229)
T 3e6j_A 81 -----VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA 154 (229)
T ss_dssp -----TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT
T ss_pred -----hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH
Confidence 333444444555555555554444444445555555555555554 44444555555555555555555544445
Q ss_pred hhcCCCCCEEEccCCcceecC
Q 037488 346 LEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 346 ~~~l~~L~~l~l~~N~l~~~~ 366 (628)
|..+++|+.|++++|++.+..
T Consensus 155 ~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 155 FDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp TTTCTTCCEEECTTSCBCTTB
T ss_pred HhCCCCCCEEEeeCCCccCCc
Confidence 555555555555555555443
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.76 E-value=1e-20 Score=204.37 Aligned_cols=216 Identities=22% Similarity=0.148 Sum_probs=115.3
Q ss_pred cCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCC
Q 037488 107 SNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQ 186 (628)
Q Consensus 107 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 186 (628)
..+++|+.|+|++|.++ .+|..++.+. .|+.|++++|......|..+ ..+...+..|..++.+++|+
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~-~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~ 412 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCK-ELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLK 412 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHH-HHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHH-HHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhcc
Confidence 45667777777777776 4566666665 46666665443211111000 01112334555555566666
Q ss_pred Eee-cccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCC
Q 037488 187 LLN-LEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNF 265 (628)
Q Consensus 187 ~L~-L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~ 265 (628)
.|+ ++.|.+. .|..+.+++|.++...+. .|+.|+|++|.|+++|. +..+++|+.|+|++|.
T Consensus 413 ~L~~l~~n~~~-----------~L~~l~l~~n~i~~l~~~------~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~ 474 (567)
T 1dce_A 413 AVDPMRAAYLD-----------DLRSKFLLENSVLKMEYA------DVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNR 474 (567)
T ss_dssp HHCGGGHHHHH-----------HHHHHHHHHHHHHHHHHT------TCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSC
T ss_pred cCcchhhcccc-----------hhhhhhhhcccccccCcc------CceEEEecCCCCCCCcC-ccccccCcEeecCccc
Confidence 665 4444332 122333344444332211 25555555555555554 5555555555555555
Q ss_pred CcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccC-ChhhcCCCCCCEEECcCCcccccCch
Q 037488 266 FTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSI-PDSIGDLINLKSLDLSNNNLSGIIPI 344 (628)
Q Consensus 266 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~~ 344 (628)
++ .+|..++.+++|+.|+|++|.+++ +| .++.+++|++|+|++|++++.. |..++.+++|+.|++++|.+++.+|.
T Consensus 475 l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 475 LR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp CC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred cc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 55 344555566666666666666654 34 5556666666666666666554 66666666666666666666655432
Q ss_pred ---hhhcCCCCCEEE
Q 037488 345 ---SLEKLLDLKDIN 356 (628)
Q Consensus 345 ---~~~~l~~L~~l~ 356 (628)
.+..+++|+.|+
T Consensus 552 ~~~l~~~lp~L~~L~ 566 (567)
T 1dce_A 552 QERLAEMLPSVSSIL 566 (567)
T ss_dssp TTHHHHHCTTCSEEE
T ss_pred HHHHHHHCcccCccC
Confidence 233466666665
No 363
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.76 E-value=3e-20 Score=188.87 Aligned_cols=171 Identities=15% Similarity=0.120 Sum_probs=114.8
Q ss_pred hcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccc--------hhHHHHHHHHHHHhhccc---------CCCccee
Q 037488 426 TNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--------REAFKNFDIECDMMKHIR---------HRNLIKI 488 (628)
Q Consensus 426 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~l 488 (628)
.++|...+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|+++++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46788889999999999999987 68999999997542 223467889999999886 6666555
Q ss_pred eee-----------------ccC-------------CCc-----------------------------------------
Q 037488 489 ISS-----------------CSN-------------DDF----------------------------------------- 497 (628)
Q Consensus 489 ~~~-----------------~~~-------------~~~----------------------------------------- 497 (628)
.++ +.. +..
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 443 211 100
Q ss_pred ---------------------------------------------cccccccccccccCcccccccccccccccCccccc
Q 037488 498 ---------------------------------------------KADFGMAKPLLKEDQSLIQTQTLATIGYMAPEYGR 532 (628)
Q Consensus 498 ---------------------------------------------~~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~ 532 (628)
.+|||+|+.... ...+||+.|||||++.
T Consensus 178 H~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~aPE~~~ 250 (336)
T 2vuw_A 178 EASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSMDEDLFT 250 (336)
T ss_dssp HHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTTCSGGGC
T ss_pred HHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeecccChhhhc
Confidence 037887775422 2347999999999998
Q ss_pred cCccCcccchhhHhHH-HHHHhhCCCCCCcccCCCccHHHHHHhhcCCccceeecccccCCcccchhchhhhHHHHHHHh
Q 037488 533 EGRVSTNGDVYSFGIM-LIETFTRKKPTDEIFSGEMTLKHWVNDLLPISVMKVVDAHLLSQEDKHFVIKGQCVSFVFNLA 611 (628)
Q Consensus 533 ~~~~~~~~DVwS~Gvv-l~e~ltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 611 (628)
+.. +.++||||+|++ .+++++|..||... .|..... ..+.... ..........+..+++++.+|+
T Consensus 251 g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~s~~~~dli 316 (336)
T 2vuw_A 251 GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHYLT----DKMLKQM-TFKTKCNTPAMKQIKRKIQEFH 316 (336)
T ss_dssp CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHHHH----HHHHHTC-CCSSCCCSHHHHHHHHHHHHHH
T ss_pred CCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhHHH----Hhhhhhh-ccCcccchhhhhhcCHHHHHHH
Confidence 766 899999998777 78889999998531 1100000 0000000 0011111233456788999999
Q ss_pred hcccCCC
Q 037488 612 MKCTVES 618 (628)
Q Consensus 612 ~~cl~~d 618 (628)
.+||++|
T Consensus 317 ~~~L~~d 323 (336)
T 2vuw_A 317 RTMLNFS 323 (336)
T ss_dssp HHGGGSS
T ss_pred HHHhccC
Confidence 9999987
No 364
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.76 E-value=6.4e-19 Score=171.90 Aligned_cols=169 Identities=20% Similarity=0.312 Sum_probs=95.9
Q ss_pred CCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEE
Q 037488 158 LTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLH 237 (628)
Q Consensus 158 l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 237 (628)
+.++..+++++|.+++.. .+..+++|++|++++|.+.. ++ .+..+++|++|++++|++++..+ +..+++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 344555566666665332 35566666677777666653 33 56666666667776666665443 66666777777
Q ss_pred ccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCccc
Q 037488 238 LGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGS 317 (628)
Q Consensus 238 L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~ 317 (628)
+++|+++.+|.... ++|++|++++|.+++. ..+..+++|+.|++++|++++. + .++.+++|+.|++++|++++.
T Consensus 92 L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 92 VNRNRLKNLNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT 165 (263)
T ss_dssp CCSSCCSCCTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC
T ss_pred CCCCccCCcCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch
Confidence 77776666654322 5666666666665542 1355555555555555555543 2 344555555555555555533
Q ss_pred CChhhcCCCCCCEEECcCCcccc
Q 037488 318 IPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 318 ~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
..+..+++|+.|++++|.+..
T Consensus 166 --~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 --GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp --TTSTTCCCCCEEEEEEEEEEC
T ss_pred --HHhccCCCCCEEeCCCCcccC
Confidence 334555555555555555543
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.75 E-value=2.4e-20 Score=201.49 Aligned_cols=191 Identities=21% Similarity=0.179 Sum_probs=142.6
Q ss_pred cCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcE
Q 037488 156 SNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRS 235 (628)
Q Consensus 156 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 235 (628)
..+++|+.|+|++|++. .+|..++.+++|+.|++++|......|..+ ..+.+.+..|..++.+++|+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll-----------~~~~~~~~~~~~l~~l~~L~~ 413 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLM-----------RALDPLLYEKETLQYFSTLKA 413 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHH-----------HHHCTGGGHHHHHHHHHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHH-----------HhcccccCCHHHHHHHHhccc
Confidence 45667777777777775 567777777777777776554110000000 001122334444555555555
Q ss_pred EE--------------ccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCC
Q 037488 236 LH--------------LGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYL 301 (628)
Q Consensus 236 L~--------------L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 301 (628)
|+ +++|.++.+|. ..|+.|++++|.+++ +|. ++.+++|+.|+|++|.++ .+|..++.+
T Consensus 414 L~~l~~n~~~~L~~l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 414 VDPMRAAYLDDLRSKFLLENSVLKMEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp HCGGGHHHHHHHHHHHHHHHHHHHHHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred CcchhhcccchhhhhhhhcccccccCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 55 44445555443 258999999999997 455 999999999999999999 778899999
Q ss_pred CCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccC-chhhhcCCCCCEEEccCCcceecCCC
Q 037488 302 KDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGII-PISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 302 ~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
++|+.|+|++|++++ +| .++.+++|+.|++++|.+++.. |..+..+++|+.|++++|++++.+|.
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~ 551 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 551 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSC
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccH
Confidence 999999999999996 66 7999999999999999999887 99999999999999999999987764
No 366
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=4.7e-18 Score=157.44 Aligned_cols=132 Identities=23% Similarity=0.291 Sum_probs=98.8
Q ss_pred cEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCC-cccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 234 RSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPL-EIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 234 ~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
+.+++++|.++.+|..+.. ++++|++++|.+++..+. .|..+++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 5677777777777765543 677777777777765554 3677777777788777777777777777778888888888
Q ss_pred cCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 313 RLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 313 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
++++..+..|..+++|+.|++++|++++..|..+..+++|+.|++++|++.+.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 8877777777777888888888888877777777778888888888888776654
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.75 E-value=4.9e-18 Score=158.16 Aligned_cols=153 Identities=16% Similarity=0.228 Sum_probs=84.4
Q ss_pred cCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEE
Q 037488 180 GKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYL 259 (628)
Q Consensus 180 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L 259 (628)
..+++|+.|++++|.+. .+| .+..+++|++|++++|.+ +.++ .+..+++|++|
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~------------------------~~~~-~l~~l~~L~~L 93 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHA------------------------TNYN-PISGLSNLERL 93 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCC------------------------SCCG-GGTTCTTCCEE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCC------------------------Ccch-hhhcCCCCCEE
Confidence 34455556666665555 233 345555555555555544 3332 33444555555
Q ss_pred EcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc-CcccCChhhcCCCCCCEEECcCCcc
Q 037488 260 NLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR-LQGSIPDSIGDLINLKSLDLSNNNL 338 (628)
Q Consensus 260 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~l~~L~~L~l~~N~l 338 (628)
++++|.+++..+..+..+++|++|++++|.+++..|..++.+++|++|++++|+ ++ .+| .+..+++|+.|++++|.+
T Consensus 94 ~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i 171 (197)
T 4ezg_A 94 RIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGV 171 (197)
T ss_dssp EEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCC
T ss_pred EeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCC
Confidence 555555554444555555666666666666655555555666666666666665 43 333 466666666666666666
Q ss_pred cccCchhhhcCCCCCEEEccCCcce
Q 037488 339 SGIIPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 339 ~~~~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
++.. .+..+++|+.|++++|++.
T Consensus 172 ~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 172 HDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp CCCT--TGGGCSSCCEEEECBC---
T ss_pred cChH--HhccCCCCCEEEeeCcccC
Confidence 6532 4566667777777776654
No 368
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2.6e-18 Score=167.55 Aligned_cols=171 Identities=22% Similarity=0.293 Sum_probs=149.4
Q ss_pred CCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEE
Q 037488 181 KLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLN 260 (628)
Q Consensus 181 ~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~ 260 (628)
.+.++..+++++|.+.+.. .+..+++|+.|++++|.++.. + .+..+++|+.|++++|+++.+|. +..+++|++|+
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~ 91 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEE
Confidence 4567788899999998543 578899999999999999864 4 78999999999999999999987 88999999999
Q ss_pred cCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 261 LSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 261 l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
+++|.+++..+. .. ++|+.|++++|++++. + .+..+++|+.|++++|++++. + .+..+++|+.|++++|.+++
T Consensus 92 L~~N~l~~l~~~--~~-~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 92 VNRNRLKNLNGI--PS-ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CCSSCCSCCTTC--CC-SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCCccCCcCcc--cc-CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 999999875432 23 8999999999999864 3 588999999999999999864 4 68999999999999999997
Q ss_pred cCchhhhcCCCCCEEEccCCcceec
Q 037488 341 IIPISLEKLLDLKDINVSFNKLEGE 365 (628)
Q Consensus 341 ~~~~~~~~l~~L~~l~l~~N~l~~~ 365 (628)
. ..+..+++|+.|++++|++.+.
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEECC
T ss_pred h--HHhccCCCCCEEeCCCCcccCC
Confidence 7 6788999999999999998865
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=1.1e-18 Score=194.55 Aligned_cols=196 Identities=19% Similarity=0.174 Sum_probs=105.6
Q ss_pred CCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCC
Q 037488 81 RNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTN 160 (628)
Q Consensus 81 ~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~ 160 (628)
+.++.|+|.+|.+...+. ..|+.++|+.|.|.+. .+..|.+. ..+..+..+++
T Consensus 173 ~~~~~l~L~~n~~~~~~~-----------~~l~~l~Ls~~~i~~~---------------~~~~n~~~-~~~~~~~~l~~ 225 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQ-----------ALLQHKKLSQYSIDED---------------DDIENRMV-MPKDSKYDDQL 225 (727)
T ss_dssp ----------------------------------------------------------------------------CCCC
T ss_pred CccceEEeeCCCCCcchh-----------hHhhcCccCcccccCc---------------ccccccee-cChhhhccCCC
Confidence 445666666666554321 2345555555555422 12233333 45667778888
Q ss_pred CCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccC
Q 037488 161 LIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGS 240 (628)
Q Consensus 161 L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 240 (628)
|+.|+|++|.+. .+|..+..+++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|+.+++|++|+|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 888888888887 56666668888888888888887 67777888888888888888887 5577788888888888888
Q ss_pred CcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCcc-ccEEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 241 NQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKV-LIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 241 n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
|.|+.+|..+..+++|++|+|++|.+++.+|..+..+.. +..++|++|.+++.+|.. |+.|++++|
T Consensus 303 N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 303 NMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp SCCCCCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------------
T ss_pred CCCCccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeecc
Confidence 888888887878888888888888888777766654322 223667777777766643 445555555
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=3.2e-17 Score=152.59 Aligned_cols=152 Identities=14% Similarity=0.202 Sum_probs=93.5
Q ss_pred cCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcE
Q 037488 156 SNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRS 235 (628)
Q Consensus 156 ~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 235 (628)
..+++|+.|++++|.+. .+| .+..+++|++|++++|.+.. +..+..+++|++|++++|++++..+..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 44556666666666665 334 45666666666666665542 235666666666666666666555666666666666
Q ss_pred EEccCCcCCc-CCCCccCCCCCcEEEcCCCC-CcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc
Q 037488 236 LHLGSNQITS-IPSTLLNLKDILYLNLSSNF-FTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR 313 (628)
Q Consensus 236 L~L~~n~l~~-lp~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 313 (628)
|++++|+++. .|..+..+++|++|++++|. ++. +| .+..+++|+.|++++|.+++. + .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~-~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITD-IM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCC-CG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccc-cH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 6666666664 44555666666777776666 443 33 466667777777777776643 2 45666777777777776
Q ss_pred Cc
Q 037488 314 LQ 315 (628)
Q Consensus 314 ~~ 315 (628)
+.
T Consensus 193 i~ 194 (197)
T 4ezg_A 193 IG 194 (197)
T ss_dssp --
T ss_pred cC
Confidence 64
No 371
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=2.8e-18 Score=191.25 Aligned_cols=189 Identities=24% Similarity=0.244 Sum_probs=103.3
Q ss_pred EccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC
Q 037488 165 YLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT 244 (628)
Q Consensus 165 ~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~ 244 (628)
++..|.+. ..|..+..++.|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|..+++|++|+|++|.|+
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 44455554 55667777888888888888877 56666667788888888888887 56777778888888888888888
Q ss_pred cCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCC-CCEEeCCCCcCcccCChhhc
Q 037488 245 SIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKD-LQYLFLEYNRLQGSIPDSIG 323 (628)
Q Consensus 245 ~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~l~~n~~~~~~~~~~~ 323 (628)
.+|..+..+++|++|+|++|.++ .+|..|+.+++|+.|+|++|.+++.+|..+..+.. +..++|++|.+++.+|.
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~--- 359 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH--- 359 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC---
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcc---
Confidence 88877777888888888888776 45666788888888888888887777766543321 22366777777776665
Q ss_pred CCCCCCEEECcCC--------cccccCchhhhcCCCCCEEEccCCcce
Q 037488 324 DLINLKSLDLSNN--------NLSGIIPISLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 324 ~l~~L~~L~l~~N--------~l~~~~~~~~~~l~~L~~l~l~~N~l~ 363 (628)
.|+.|++++| .+.+..+..+..+..+....+++|-+.
T Consensus 360 ---~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 360 ---ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---C-----------------------------------------CCC
T ss_pred ---ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 3445556555 222222333334444444555555543
No 372
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.70 E-value=3.1e-17 Score=165.90 Aligned_cols=272 Identities=13% Similarity=0.100 Sum_probs=169.3
Q ss_pred CCCCCEEecCcc----------C-CCCCCEEEccCCcce--ecCCccccCCCCCCEEeccCCcccccCccccCC------
Q 037488 19 VSTLNSLYLQNV----------Q-LQNLEELLLWGNNFS--GTIPSFIFNASKLSRLELQMNSFYGFIPNTFGN------ 79 (628)
Q Consensus 19 l~~L~~L~l~~n----------~-l~~L~~L~ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~------ 79 (628)
+.+|+.|.++++ + +++|++|||++|++. ...+..+. .+..+.+..| .+.+.+|.+
T Consensus 24 ~~~l~~L~l~g~i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~---~~~~~~~~~~---~I~~~aF~~~~~~~~ 97 (329)
T 3sb4_A 24 ANSITHLTLTGKLNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP---NGKFYIYMAN---FVPAYAFSNVVNGVT 97 (329)
T ss_dssp HHHCSEEEEEEEECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG---GGCCEEECTT---EECTTTTEEEETTEE
T ss_pred hCceeEEEEeccccHHHHHHHHHhhccCeEEecCcceeEEecCcccccc---cccccccccc---ccCHHHhcccccccc
Confidence 456777777764 1 677999999999887 32222222 2344444444 234556666
Q ss_pred --CCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCc----ccccCCc
Q 037488 80 --LRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCN----ISGGIPE 153 (628)
Q Consensus 80 --l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~----~~~~~~~ 153 (628)
+++|+.|+|.+ .++.+.. .+|.+|++|+.+++++|.+..+.+.+|..+. .+..+....+. .......
T Consensus 98 ~g~~~L~~l~L~~-~i~~I~~-----~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~-~l~~l~~~~~~~~~~~~~i~~~ 170 (329)
T 3sb4_A 98 KGKQTLEKVILSE-KIKNIED-----AAFKGCDNLKICQIRKKTAPNLLPEALADSV-TAIFIPLGSSDAYRFKNRWEHF 170 (329)
T ss_dssp EECTTCCC-CBCT-TCCEECT-----TTTTTCTTCCEEEBCCSSCCEECTTSSCTTT-CEEEECTTCTHHHHTSTTTTTS
T ss_pred cccCCCcEEECCc-cccchhH-----HHhhcCcccceEEcCCCCccccchhhhcCCC-ceEEecCcchhhhhcccccccc
Confidence 77777777766 5665543 2466677777777777766666666665543 22222222211 1112233
Q ss_pred cccCCCCCC-EEEccCCcCCccccccc----cCCCCCCEeecccCcccccCCccc-cCCCCCCEEEccCCcCcccCCCCc
Q 037488 154 EISNLTNLI-AIYLGGNKLNGSIPIAL----GKLQKLQLLNLEYNQLEGSIPDDL-CRLAALFQLDLGSNKLSGFVPASF 227 (628)
Q Consensus 154 ~~~~l~~L~-~L~L~~n~l~~~~p~~~----~~l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~ 227 (628)
.|.++.+|+ .+.+.... .++..+ ....++..+.+.++-.... ...+ ..+++|+.++|++|+++.+.+.+|
T Consensus 171 ~f~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~-~~~l~~~~~~L~~l~L~~n~i~~I~~~aF 246 (329)
T 3sb4_A 171 AFIEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNAD-FKLIRDYMPNLVSLDISKTNATTIPDFTF 246 (329)
T ss_dssp CEEESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHH-HHHHHHHCTTCCEEECTTBCCCEECTTTT
T ss_pred ccccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHH-HHHHHHhcCCCeEEECCCCCcceecHhhh
Confidence 455666666 44443321 222211 1244556666655422111 1111 236788888888888887777788
Q ss_pred cCCCCCcEEEccCCcCCcCCC-CccCCCCCc-EEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCC
Q 037488 228 GNLTNLRSLHLGSNQITSIPS-TLLNLKDIL-YLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQ 305 (628)
Q Consensus 228 ~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~-~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 305 (628)
.++++|+.|+|++| ++.++. .|.++.+|+ .+++.+ .++.+.+..|.++++|+.++++.|.++.+.+..|.++++|+
T Consensus 247 ~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~ 324 (329)
T 3sb4_A 247 AQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSK 324 (329)
T ss_dssp TTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCC
T ss_pred hCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchh
Confidence 88888888888887 777765 455788888 888887 67767778888889999999888888877788888888888
Q ss_pred EEeC
Q 037488 306 YLFL 309 (628)
Q Consensus 306 ~L~l 309 (628)
.++.
T Consensus 325 ~ly~ 328 (329)
T 3sb4_A 325 LIYK 328 (329)
T ss_dssp EEEC
T ss_pred hhcc
Confidence 8864
No 373
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.68 E-value=4.6e-16 Score=143.92 Aligned_cols=130 Identities=28% Similarity=0.385 Sum_probs=98.2
Q ss_pred cEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc
Q 037488 234 RSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR 313 (628)
Q Consensus 234 ~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 313 (628)
+.+++++|.++.+|..+. ++|++|++++|.++ .+|..|..+++|+.|+|++|.+++..+..|..+++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 466777777777776543 46777777777776 445667777777777888787777777777778888888888888
Q ss_pred CcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecC
Q 037488 314 LQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEI 366 (628)
Q Consensus 314 ~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 366 (628)
+++..+..|..+++|+.|++++|.++.+.+..|..+++|+.|++++|++.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 87777777888888888888888888777767778888888888888887544
No 374
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.68 E-value=2.3e-15 Score=155.39 Aligned_cols=262 Identities=10% Similarity=0.093 Sum_probs=150.6
Q ss_pred CCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCc
Q 037488 34 NLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLK 113 (628)
Q Consensus 34 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~ 113 (628)
.++.+.+.+ .++.+.+.+|.++ +|+.+.+..| ++.+...+|.+. +|+.+.+.. .++.+.. .+|.+|++|+
T Consensus 114 ~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~-----~aF~~c~~L~ 183 (401)
T 4fdw_A 114 GYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKE-----DIFYYCYNLK 183 (401)
T ss_dssp SCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECS-----STTTTCTTCC
T ss_pred CccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehH-----HHhhCcccCC
Confidence 344444432 3444555555554 5666666544 555555666553 466666654 3443332 2455666666
Q ss_pred EEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccC
Q 037488 114 YFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYN 193 (628)
Q Consensus 114 ~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 193 (628)
.+++++|.++.+... .|. .++|+.+.+..+ +......+|.++++|+.+++..|
T Consensus 184 ~l~l~~n~l~~I~~~-------------------------aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~ 236 (401)
T 4fdw_A 184 KADLSKTKITKLPAS-------------------------TFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN 236 (401)
T ss_dssp EEECTTSCCSEECTT-------------------------TTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT
T ss_pred eeecCCCcceEechh-------------------------hEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC
Confidence 666666555544333 333 345555555533 44444445666666666666543
Q ss_pred cccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCC-----cCC-CCccCCCCCcEEEcCCCCCc
Q 037488 194 QLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQIT-----SIP-STLLNLKDILYLNLSSNFFT 267 (628)
Q Consensus 194 ~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-----~lp-~~~~~l~~L~~L~l~~n~l~ 267 (628)
++.....+|.+ .+|+.+.+. +.++.+...+|.++++|+.+++.+|.+. .++ ..|..+++|+.+.+.. .++
T Consensus 237 -l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~ 312 (401)
T 4fdw_A 237 -VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR 312 (401)
T ss_dssp -CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC
T ss_pred -ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE
Confidence 34344445555 566666663 4455555666666666666666666554 343 3445566777777763 355
Q ss_pred CCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCC-CCCEEECcCCcc
Q 037488 268 GPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLI-NLKSLDLSNNNL 338 (628)
Q Consensus 268 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~l~~N~l 338 (628)
......|.++.+|+.+++..| ++.+....|.++ +|+.+++.+|.+....+..|.+++ +++.|++..+.+
T Consensus 313 ~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~ 382 (401)
T 4fdw_A 313 ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESV 382 (401)
T ss_dssp EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGH
T ss_pred EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHH
Confidence 555666777777777777544 555556677777 777777777777655666676664 567777766554
No 375
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=6e-16 Score=141.28 Aligned_cols=133 Identities=25% Similarity=0.285 Sum_probs=102.3
Q ss_pred CcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 233 LRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 233 L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
.+.+++++|.++.+|..+. ++|++|++++|.+++..+..|..+++|++|++++|.+++..+..+..+++|++|++++|
T Consensus 9 ~~~l~~~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp TTEEECCSSCCSSCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEecCCCCccCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 4567777777777775543 57778888888777766666777888888888888887766666777888888888888
Q ss_pred cCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 313 RLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 313 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
++++..+..+..+++|+.|++++|.++++.+..+..+++|+.|++++|++.+.+|
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 8887666677788888888888888887766667778888888888888877655
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=3.2e-16 Score=158.43 Aligned_cols=259 Identities=15% Similarity=0.136 Sum_probs=174.4
Q ss_pred CCCCCEEEccCccccCCCCCCcccccccC-CCCCcEEEcccCCCC--CCCchHHhccccccceeeccCCcccccCCcccc
Q 037488 80 LRNLNRLGLNDNYLTSSTPKLNFLSSLSN-CKYLKYFSFSNNSLD--GILPRAIGNLSQSMEIFWMHSCNISGGIPEEIS 156 (628)
Q Consensus 80 l~~L~~L~L~~N~l~~~~~~~~~~~~~~~-l~~L~~L~l~~n~l~--~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~ 156 (628)
+.+|+.|.++++ +... .+..+.. +++|++|||++|++. ...+..+. .+..+.+..+. ..+..|.
T Consensus 24 ~~~l~~L~l~g~-i~~~-----~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~----~~~~~~~~~~~---I~~~aF~ 90 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAE-----DFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYP----NGKFYIYMANF---VPAYAFS 90 (329)
T ss_dssp HHHCSEEEEEEE-ECHH-----HHHHHHHSCTTCCEEEEEEEEECCEEESSSSSG----GGCCEEECTTE---ECTTTTE
T ss_pred hCceeEEEEecc-ccHH-----HHHHHHHhhccCeEEecCcceeEEecCcccccc----ccccccccccc---cCHHHhc
Confidence 567889999875 2110 1123333 789999999999988 22222221 13334444442 3345677
Q ss_pred C--------CCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEccCCc----CcccCC
Q 037488 157 N--------LTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNK----LSGFVP 224 (628)
Q Consensus 157 ~--------l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~----l~~~~~ 224 (628)
+ +++|+.|+|.+ .++...+.+|.++++|+.+++++|.+....+..|.++.++..+.+..+. ...+..
T Consensus 91 ~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~ 169 (329)
T 3sb4_A 91 NVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEH 169 (329)
T ss_dssp EEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTT
T ss_pred ccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccc
Confidence 7 99999999988 7886667789999999999999999887888888888888777766532 222334
Q ss_pred CCccCCCCCc-EEEccCCcCCcCCCCc----------------------------cCCCCCcEEEcCCCCCcCCCCCccc
Q 037488 225 ASFGNLTNLR-SLHLGSNQITSIPSTL----------------------------LNLKDILYLNLSSNFFTGPLPLEIG 275 (628)
Q Consensus 225 ~~~~~l~~L~-~L~L~~n~l~~lp~~~----------------------------~~l~~L~~L~l~~n~l~~~~~~~~~ 275 (628)
..|.++.+|+ .+.+.... .++..+ ..+++|+.+++++|.++.+.+..|.
T Consensus 170 ~~f~~~~~L~~~i~~~~~~--~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~ 247 (329)
T 3sb4_A 170 FAFIEGEPLETTIQVGAMG--KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFA 247 (329)
T ss_dssp SCEEESCCCEEEEEECTTC--CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTT
T ss_pred cccccccccceeEEecCCC--cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhh
Confidence 4566666665 34333211 111100 0256777888887777777777777
Q ss_pred CCccccEEEcCCCcCCCCCccccCCCCCCC-EEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCE
Q 037488 276 NLKVLIKIDLSMNNFSGVIPITIGYLKDLQ-YLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKD 354 (628)
Q Consensus 276 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~ 354 (628)
++.+|+.+++.+| ++.+.+..|.++.+|+ .+++.+ .++...+.+|.++++|+.|++++|.++.+.+..|.++++|+.
T Consensus 248 ~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ 325 (329)
T 3sb4_A 248 QKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKL 325 (329)
T ss_dssp TCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCE
T ss_pred CCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhh
Confidence 7878888888776 6666667777777787 787777 566566677778888888888777777777777777777777
Q ss_pred EE
Q 037488 355 IN 356 (628)
Q Consensus 355 l~ 356 (628)
++
T Consensus 326 ly 327 (329)
T 3sb4_A 326 IY 327 (329)
T ss_dssp EE
T ss_pred hc
Confidence 65
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.66 E-value=6.6e-16 Score=142.90 Aligned_cols=129 Identities=23% Similarity=0.280 Sum_probs=87.1
Q ss_pred CEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCC--ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCC
Q 037488 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPST--LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSM 287 (628)
Q Consensus 210 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~--~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 287 (628)
+.+++++|.++. +|..+. .+|+.|++++|+++.++.. +..+++|++|++++|.+++..|..|..+++|++|+|++
T Consensus 11 ~~l~~s~~~l~~-ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLKE-IPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCc-CccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 455666665543 333332 2566666666666666542 55666777777777777766666777777777777777
Q ss_pred CcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCccccc
Q 037488 288 NNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGI 341 (628)
Q Consensus 288 N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 341 (628)
|++++..+..|..+++|++|+|++|++++..|..+..+++|+.|++++|.+.+.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 777776666677777777777777777777777777777777777777777654
No 378
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=3.7e-16 Score=141.40 Aligned_cols=131 Identities=24% Similarity=0.188 Sum_probs=57.3
Q ss_pred CCCEEEccCCcCc-ccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcC
Q 037488 208 ALFQLDLGSNKLS-GFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLS 286 (628)
Q Consensus 208 ~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls 286 (628)
+|+.|++++|.++ +.+|..+..+++|+.|++++|.++.+ ..+..+++|++|++++|.+++.+|..+..+++|+.|+++
T Consensus 25 ~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 103 (168)
T 2ell_A 25 AVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLS 103 (168)
T ss_dssp SCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECB
T ss_pred cCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEecc
Confidence 4444444444443 23334444444444444444444444 334444444444444444443333333344444444444
Q ss_pred CCcCCCCCc-cccCCCCCCCEEeCCCCcCcccCC---hhhcCCCCCCEEECcCCccc
Q 037488 287 MNNFSGVIP-ITIGYLKDLQYLFLEYNRLQGSIP---DSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 287 ~N~l~~~~p-~~~~~l~~L~~L~l~~n~~~~~~~---~~~~~l~~L~~L~l~~N~l~ 339 (628)
+|.+++... ..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+.
T Consensus 104 ~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 104 GNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp SSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred CCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 444443211 334444444444444444443322 23444444444444444443
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=7.5e-15 Score=151.56 Aligned_cols=266 Identities=14% Similarity=0.153 Sum_probs=204.5
Q ss_pred CCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccc
Q 037488 55 NASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLS 134 (628)
Q Consensus 55 ~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 134 (628)
.+..++.+.+. |.++.|...+|.+. +|+.+.+..| ++.+.. .+|.++ +|+.+.+..
T Consensus 111 ~~~~l~~i~ip-~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~-----~aF~~~-~L~~i~lp~--------------- 166 (401)
T 4fdw_A 111 ILKGYNEIILP-NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGD-----MAFFNS-TVQEIVFPS--------------- 166 (401)
T ss_dssp ECSSCSEEECC-TTCCEECTTTTTTC-CCSEEECCTT-CCEECT-----TTTTTC-CCCEEECCT---------------
T ss_pred ecCCccEEEEC-CccCEehHhhcccC-CccEEEeCCC-ccEECH-----HhcCCC-CceEEEeCC---------------
Confidence 34566666665 34566666666663 5666666655 444432 234443 455555432
Q ss_pred cccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCCEEEc
Q 037488 135 QSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALFQLDL 214 (628)
Q Consensus 135 ~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L 214 (628)
.+...-+.+|.++++|+.+++.+|+++.....+|. ..+|+.+.|..+ +..+...+|.++++|+.+++
T Consensus 167 -----------~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 167 -----------TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp -----------TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEEC
T ss_pred -----------CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEec
Confidence 23334456788999999999999999866666676 589999999855 77677789999999999999
Q ss_pred cCCcCcccCCCCccCCCCCcEEEccCCcCCcCCC-CccCCCCCcEEEcCCCCCc-----CCCCCcccCCccccEEEcCCC
Q 037488 215 GSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPS-TLLNLKDILYLNLSSNFFT-----GPLPLEIGNLKVLIKIDLSMN 288 (628)
Q Consensus 215 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~-~~~~l~~L~~L~l~~n~l~-----~~~~~~~~~l~~L~~L~Ls~N 288 (628)
..| ++.+...+|.+ .+|+.+.+ .+.++.++. .|..+++|+.+.+.+|.+. ...+..|.++++|+.+++. +
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~ 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-E 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-T
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-C
Confidence 875 67677788988 79999999 456888854 6668999999999988765 4667889999999999999 4
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCC-CCCEEEccCCcce
Q 037488 289 NFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLL-DLKDINVSFNKLE 363 (628)
Q Consensus 289 ~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~l~l~~N~l~ 363 (628)
.++.+....|.++.+|+.+.|..| ++.....+|.++ +|+.+++.+|.+..+.+..|..++ +++.|++..+.+.
T Consensus 310 ~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 310 SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 577777889999999999999765 666778899999 999999999999888788888874 7889999887654
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.8e-15 Score=139.93 Aligned_cols=128 Identities=26% Similarity=0.309 Sum_probs=104.5
Q ss_pred CEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCc
Q 037488 210 FQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNN 289 (628)
Q Consensus 210 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 289 (628)
+.+++++|.++. +|..+. ++|+.|++++|.++.+|..+..+++|++|++++|.+++..+..|.++++|++|+|++|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 467777777764 344332 57888888888888888778888888888888888888777888888899999999999
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 290 FSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 290 l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
+++..|..|..+++|++|+|++|+++...+..|..+++|+.|++++|.+..
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 988888888888999999999999987667778889999999999998863
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=6.7e-16 Score=139.65 Aligned_cols=133 Identities=22% Similarity=0.209 Sum_probs=120.4
Q ss_pred CCCCcEEEccCCcCC--cCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEE
Q 037488 230 LTNLRSLHLGSNQIT--SIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYL 307 (628)
Q Consensus 230 l~~L~~L~L~~n~l~--~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 307 (628)
.++|+.|++++|.++ .+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478999999999999 8998888999999999999999876 778999999999999999998788888889999999
Q ss_pred eCCCCcCcccC-ChhhcCCCCCCEEECcCCcccccCc---hhhhcCCCCCEEEccCCccee
Q 037488 308 FLEYNRLQGSI-PDSIGDLINLKSLDLSNNNLSGIIP---ISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 308 ~l~~n~~~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~~N~l~~ 364 (628)
++++|++++.. +..+..+++|+.|++++|.+++..+ ..+..+++|+.|++++|.+..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999998643 2789999999999999999998766 578999999999999998764
No 382
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=1.1e-15 Score=135.24 Aligned_cols=126 Identities=21% Similarity=0.256 Sum_probs=76.9
Q ss_pred CCCcEEEccCCcCC--cCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEe
Q 037488 231 TNLRSLHLGSNQIT--SIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLF 308 (628)
Q Consensus 231 ~~L~~L~L~~n~l~--~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 308 (628)
++|+.|++++|.++ .+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..++.+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 44555555555555 4555555555555555555555544 4455666666666666666655565555566667777
Q ss_pred CCCCcCccc-CChhhcCCCCCCEEECcCCcccccCc---hhhhcCCCCCEEEcc
Q 037488 309 LEYNRLQGS-IPDSIGDLINLKSLDLSNNNLSGIIP---ISLEKLLDLKDINVS 358 (628)
Q Consensus 309 l~~n~~~~~-~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~ 358 (628)
+++|++++. .+..+..+++|+.|++++|.+++..+ ..+..+++|+.|+++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 777666642 23556667777777777777766555 456667777777665
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.62 E-value=6.6e-16 Score=136.66 Aligned_cols=127 Identities=22% Similarity=0.181 Sum_probs=76.6
Q ss_pred CCCCEEEccCCcCc-ccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEc
Q 037488 207 AALFQLDLGSNKLS-GFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDL 285 (628)
Q Consensus 207 ~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 285 (628)
++|+.|++++|.++ +.+|..+..+++|+.|++++|.++.+ ..+..+++|++|++++|.+++.+|..+..+++|++|++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 34555555555554 34444555555555555555555555 44555556666666666666545555555666666666
Q ss_pred CCCcCCCC-CccccCCCCCCCEEeCCCCcCcccCC---hhhcCCCCCCEEECc
Q 037488 286 SMNNFSGV-IPITIGYLKDLQYLFLEYNRLQGSIP---DSIGDLINLKSLDLS 334 (628)
Q Consensus 286 s~N~l~~~-~p~~~~~l~~L~~L~l~~n~~~~~~~---~~~~~l~~L~~L~l~ 334 (628)
++|.+++. .+..++.+++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666643 23556667777777777777765544 467777777777765
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=1.2e-14 Score=132.50 Aligned_cols=110 Identities=23% Similarity=0.221 Sum_probs=53.2
Q ss_pred CCcEEEccCCcCCcCCCC-ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCC
Q 037488 232 NLRSLHLGSNQITSIPST-LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLE 310 (628)
Q Consensus 232 ~L~~L~L~~n~l~~lp~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 310 (628)
+|+.|++++|+++.+|.. +..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..+..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 344444444444443322 2334444444444444443333444445555555555555554444444555555555555
Q ss_pred CCcCcccCChhhcCCCCCCEEECcCCccccc
Q 037488 311 YNRLQGSIPDSIGDLINLKSLDLSNNNLSGI 341 (628)
Q Consensus 311 ~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~ 341 (628)
+|++++..+..+..+++|+.|++++|.+.+.
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 5555544444445555666666666655543
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.58 E-value=3.7e-15 Score=135.83 Aligned_cols=132 Identities=20% Similarity=0.152 Sum_probs=72.8
Q ss_pred cCCCCCcEEEccCCcCCcCCCCccCC-CCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCE
Q 037488 228 GNLTNLRSLHLGSNQITSIPSTLLNL-KDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQY 306 (628)
Q Consensus 228 ~~l~~L~~L~L~~n~l~~lp~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 306 (628)
..+.+|+.|++++|.++.+|. +..+ ++|++|++++|.+++. ..+..+++|++|++++|.+++..+..+..+++|++
T Consensus 16 ~~~~~L~~L~l~~n~l~~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 16 TNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp ECTTSCEEEECTTSCCCSCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CCcCCceEEEeeCCCCchhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 344455555555555554432 2222 2555555555555543 34555556666666666665444444455666666
Q ss_pred EeCCCCcCcccCCh--hhcCCCCCCEEECcCCcccccCch---hhhcCCCCCEEEccCCcce
Q 037488 307 LFLEYNRLQGSIPD--SIGDLINLKSLDLSNNNLSGIIPI---SLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 307 L~l~~n~~~~~~~~--~~~~l~~L~~L~l~~N~l~~~~~~---~~~~l~~L~~l~l~~N~l~ 363 (628)
|++++|++. .+|. .+..+++|+.|++++|.++...+. .+..+++|+.|+++.|...
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 666666664 3343 566666666666666666543322 3666677777777766554
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.56 E-value=3.5e-15 Score=136.02 Aligned_cols=109 Identities=23% Similarity=0.270 Sum_probs=54.2
Q ss_pred ccCCCCCCEEEccCCcCCccccccccCC-CCCCEeecccCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCC
Q 037488 155 ISNLTNLIAIYLGGNKLNGSIPIALGKL-QKLQLLNLEYNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNL 233 (628)
Q Consensus 155 ~~~l~~L~~L~L~~n~l~~~~p~~~~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 233 (628)
+..+.+|+.|++++|.++. +|. +..+ ++|++|++++|.+++. ..+..+++|++|++++|++++..+..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455566666666666653 233 2222 2555566655555543 345555555555555555554433333555555
Q ss_pred cEEEccCCcCCcCCC--CccCCCCCcEEEcCCCCCc
Q 037488 234 RSLHLGSNQITSIPS--TLLNLKDILYLNLSSNFFT 267 (628)
Q Consensus 234 ~~L~L~~n~l~~lp~--~~~~l~~L~~L~l~~n~l~ 267 (628)
+.|++++|+++.+|. .+..+++|++|++++|.++
T Consensus 91 ~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 91 TELILTNNSLVELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp CEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCC
Confidence 555555555554443 3334444444444444443
No 387
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=7e-13 Score=137.36 Aligned_cols=307 Identities=14% Similarity=0.070 Sum_probs=207.3
Q ss_pred CCCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCC
Q 037488 32 LQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKY 111 (628)
Q Consensus 32 l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~ 111 (628)
+.+|+.+.|.. .++.+...+|.++++|+.+++..+ ++.+...+|.++.+|+.+.+..+ ++.+.. .+|.++..
T Consensus 70 c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~-----~aF~~~~~ 141 (394)
T 4fs7_A 70 CRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV-----EAFKGCDF 141 (394)
T ss_dssp CTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT-----TTTTTCCC
T ss_pred CCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc-----eeeecccc
Confidence 34556666653 366677788999999999999754 77788888999999988877654 333221 24555544
Q ss_pred CcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecc
Q 037488 112 LKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLE 191 (628)
Q Consensus 112 L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~ 191 (628)
++...... +..+...+|..+. .|+.+.+..+ +.......|.++.+|+.+.+..+ ++.....+|.++..|+.+.+.
T Consensus 142 ~~~~~~~~--~~~i~~~aF~~c~-~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~ 216 (394)
T 4fs7_A 142 KEITIPEG--VTVIGDEAFATCE-SLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFP 216 (394)
T ss_dssp SEEECCTT--CCEECTTTTTTCT-TCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCC
T ss_pred cccccCcc--ccccchhhhcccC-CCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecC
Confidence 33332222 2223344555554 4666666433 33344566778888888888765 444455567788888888777
Q ss_pred cCcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCC
Q 037488 192 YNQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLP 271 (628)
Q Consensus 192 ~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~ 271 (628)
.+... +.+.+....+|+.+.+..+ ++.+....|..+..|+.+.+..+...--...+.....++.+....+.+ ..
T Consensus 217 ~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i---~~ 290 (394)
T 4fs7_A 217 NSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV---PE 290 (394)
T ss_dssp TTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE---CT
T ss_pred CCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee---cc
Confidence 65432 2334445567888877643 444556678888888888887764433344556677788777766543 33
Q ss_pred CcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCC
Q 037488 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLD 351 (628)
Q Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 351 (628)
..|..+.+|+.+.+..+ ++.+....|.++.+|+.+++..+ ++..-..+|.++.+|+.+++..+ ++.+...+|.++.+
T Consensus 291 ~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 367 (394)
T 4fs7_A 291 KTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCIN 367 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTT
T ss_pred ccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCC
Confidence 56778888888888755 55566677888899999999754 66556778889999999999776 77677788999999
Q ss_pred CCEEEccCC
Q 037488 352 LKDINVSFN 360 (628)
Q Consensus 352 L~~l~l~~N 360 (628)
|+.+++..+
T Consensus 368 L~~i~lp~~ 376 (394)
T 4fs7_A 368 LKKVELPKR 376 (394)
T ss_dssp CCEEEEEGG
T ss_pred CCEEEECCC
Confidence 999988654
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=6.7e-17 Score=150.53 Aligned_cols=152 Identities=26% Similarity=0.309 Sum_probs=72.7
Q ss_pred CCCCCEeecccCcccccCCc------cccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCCCCccCCCC
Q 037488 182 LQKLQLLNLEYNQLEGSIPD------DLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKD 255 (628)
Q Consensus 182 l~~L~~L~L~~n~l~~~~p~------~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~ 255 (628)
...++.++++.+.+.+..|. .+..+++|++|++++|.+++ +| .+..+++|+.|++++|.++.+|..+..+++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~ 94 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKKIENLDAVADT 94 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcccccchhhcCCc
Confidence 34444445555544444333 44555555555555555544 23 455555555555555555555443333444
Q ss_pred CcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCC-hhhcCCCCCCEEECc
Q 037488 256 ILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIP-DSIGDLINLKSLDLS 334 (628)
Q Consensus 256 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~-~~~~~l~~L~~L~l~ 334 (628)
|++|++++|.+++. | .+.. +++|++|++++|++++..+ ..+..+++|+.|+++
T Consensus 95 L~~L~L~~N~l~~l-~-~~~~------------------------l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~ 148 (198)
T 1ds9_A 95 LEELWISYNQIASL-S-GIEK------------------------LVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLA 148 (198)
T ss_dssp CSEEEEEEEECCCH-H-HHHH------------------------HHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEEC
T ss_pred CCEEECcCCcCCcC-C-cccc------------------------CCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEec
Confidence 44444444444431 1 2333 4444444444444442211 244555555555555
Q ss_pred CCcccccCch----------hhhcCCCCCEEEccCCcce
Q 037488 335 NNNLSGIIPI----------SLEKLLDLKDINVSFNKLE 363 (628)
Q Consensus 335 ~N~l~~~~~~----------~~~~l~~L~~l~l~~N~l~ 363 (628)
+|.+.+..|. .+..+++|+.|| +|+++
T Consensus 149 ~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 149 GNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp SCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 5555443332 255666666664 44443
No 389
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=1.3e-13 Score=124.67 Aligned_cols=106 Identities=22% Similarity=0.218 Sum_probs=71.5
Q ss_pred CcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCC
Q 037488 233 LRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYN 312 (628)
Q Consensus 233 L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 312 (628)
.+.|++++|.++++|..+. ++|++|++++|.+++..|..|..+++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 4677777777777776553 66777777777777666666777777777777777776666656666666666666666
Q ss_pred cCcccCChhhcCCCCCCEEECcCCcccc
Q 037488 313 RLQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 313 ~~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
++++..+..|..+++|+.|++++|.+..
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 6665555556666666666666666653
No 390
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=1.5e-16 Score=148.12 Aligned_cols=120 Identities=25% Similarity=0.309 Sum_probs=93.0
Q ss_pred CcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhc
Q 037488 244 TSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIG 323 (628)
Q Consensus 244 ~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 323 (628)
+.+|..+..+++|++|++++|.+++ +| .+..+++|+.|++++|.++ .+|..+..+++|++|++++|++++ +| .+.
T Consensus 38 ~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~ 112 (198)
T 1ds9_A 38 EKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIE 112 (198)
T ss_dssp CCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHH
T ss_pred hhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccc
Confidence 3344456666777777777777765 44 6777777888888888877 456666667889999999999885 44 588
Q ss_pred CCCCCCEEECcCCcccccCc-hhhhcCCCCCEEEccCCcceecCCC
Q 037488 324 DLINLKSLDLSNNNLSGIIP-ISLEKLLDLKDINVSFNKLEGEIPR 368 (628)
Q Consensus 324 ~l~~L~~L~l~~N~l~~~~~-~~~~~l~~L~~l~l~~N~l~~~~p~ 368 (628)
.+++|+.|++++|.+++..+ ..+..+++|+.|++++|++.+.+|.
T Consensus 113 ~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 113 KLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred cCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 89999999999999986543 5788999999999999999887664
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=2.5e-13 Score=123.11 Aligned_cols=105 Identities=21% Similarity=0.201 Sum_probs=74.6
Q ss_pred cEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc
Q 037488 234 RSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR 313 (628)
Q Consensus 234 ~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 313 (628)
+.+++++|.++.+|..+. ++|++|++++|.+++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+
T Consensus 15 ~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 15 TLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp SEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred cEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 577777787777777654 677777777777777767777777777777777777776655556667777777777777
Q ss_pred CcccCChhhcCCCCCCEEECcCCcccc
Q 037488 314 LQGSIPDSIGDLINLKSLDLSNNNLSG 340 (628)
Q Consensus 314 ~~~~~~~~~~~l~~L~~L~l~~N~l~~ 340 (628)
+++..+..|..+++|+.|++++|.+..
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred cceeCHHHhccccCCCEEEeCCCCccc
Confidence 765555556667777777777776653
No 392
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=3.6e-13 Score=121.64 Aligned_cols=109 Identities=21% Similarity=0.190 Sum_probs=98.7
Q ss_pred CcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcC
Q 037488 256 ILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSN 335 (628)
Q Consensus 256 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 335 (628)
.+.+++++|.++. +|..+ .++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5789999999986 45444 37899999999999999899999999999999999999988888899999999999999
Q ss_pred CcccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 336 NNLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 336 N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
|+++++.+..|..+++|+.|++++|++.+..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99999888889999999999999999987665
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.45 E-value=3.9e-12 Score=131.76 Aligned_cols=295 Identities=15% Similarity=0.051 Sum_probs=218.0
Q ss_pred cceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCC
Q 037488 44 NFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLD 123 (628)
Q Consensus 44 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~ 123 (628)
+++.+...+|.++.+|+.+.+.. .++.|...+|.++.+|+.+++.++ ++.+.. .+|.++++|+.+.+..+ +.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~-----~aF~~c~~L~~i~~p~~-l~ 129 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGR-----CTFSGCYALKSILLPLM-LK 129 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECT-----TTTTTCTTCCCCCCCTT-CC
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccc-----hhhcccccchhhcccCc-ee
Confidence 46667788999999999999984 588888999999999999999866 555443 36888999998877654 44
Q ss_pred CCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccc
Q 037488 124 GILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDL 203 (628)
Q Consensus 124 ~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~ 203 (628)
.+...+|.... ..+..... .....-..+|.++++|+.+.+.++. .......|.++.+|+.+.+..+ +.......|
T Consensus 130 ~i~~~aF~~~~-~~~~~~~~--~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F 204 (394)
T 4fs7_A 130 SIGVEAFKGCD-FKEITIPE--GVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCF 204 (394)
T ss_dssp EECTTTTTTCC-CSEEECCT--TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTT
T ss_pred eecceeeeccc-ccccccCc--cccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhh
Confidence 45556666553 22222222 2222345678899999999997654 3355567888999999999876 555666788
Q ss_pred cCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCC-CCccCCCCCcEEEcCCCCCcCCCCCcccCCccccE
Q 037488 204 CRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP-STLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIK 282 (628)
Q Consensus 204 ~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 282 (628)
.++..|+.+.+..+... +.+.+....+|+.+.+..+ ++.+. ..+.....++.+.+..+... .....|.....++.
T Consensus 205 ~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~ 280 (394)
T 4fs7_A 205 AECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKK 280 (394)
T ss_dssp TTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCE
T ss_pred ccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccce
Confidence 88999998888766543 2334445578888888643 45554 34557788999999877543 56677888888988
Q ss_pred EEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCC
Q 037488 283 IDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFN 360 (628)
Q Consensus 283 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 360 (628)
+....+.+ ....|..+.+|+.+.+..+ ++.....+|.++.+|+.+++.++ ++.+...+|.++.+|+.+++..|
T Consensus 281 ~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 281 VIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp EEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT
T ss_pred eccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc
Confidence 88776543 3456778899999999765 55566778999999999999754 77777889999999999998765
No 394
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=9.4e-13 Score=119.30 Aligned_cols=108 Identities=23% Similarity=0.274 Sum_probs=96.8
Q ss_pred cEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCC
Q 037488 257 LYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNN 336 (628)
Q Consensus 257 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N 336 (628)
+.+++++|.++. +|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~~-iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLAS-VPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCCc-cCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 689999999975 555443 78999999999999999999999999999999999999877777899999999999999
Q ss_pred cccccCchhhhcCCCCCEEEccCCcceecCC
Q 037488 337 NLSGIIPISLEKLLDLKDINVSFNKLEGEIP 367 (628)
Q Consensus 337 ~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~p 367 (628)
+|+++.+..|..+++|+.|++++|++.+..+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9998887779999999999999999986554
No 395
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.37 E-value=4.4e-11 Score=123.81 Aligned_cols=108 Identities=10% Similarity=0.099 Sum_probs=57.8
Q ss_pred ccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCC
Q 037488 250 LLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLK 329 (628)
Q Consensus 250 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 329 (628)
|.....|+.+.+..+.. ......|.++..|+.+.+. +.++.+....|.++.+|+.+.|..+ ++..-..+|.++.+|+
T Consensus 261 F~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~ 337 (394)
T 4gt6_A 261 FDSCAYLASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLE 337 (394)
T ss_dssp TTTCSSCCEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred eeecccccEEecccccc-eecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCC
Confidence 33445555555544332 2334455555666666654 3344344455566666666666543 3334445566666666
Q ss_pred EEECcCCcccccCchhhhcCCCCCEEEccCCc
Q 037488 330 SLDLSNNNLSGIIPISLEKLLDLKDINVSFNK 361 (628)
Q Consensus 330 ~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~ 361 (628)
.+.+..+ ++.+....|.++.+|+.+++.+|.
T Consensus 338 ~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 338 RIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred EEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 6666433 444555566666666666666553
No 396
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.29 E-value=4.4e-10 Score=116.24 Aligned_cols=321 Identities=12% Similarity=0.138 Sum_probs=169.6
Q ss_pred cccCCChhccCCC-CCCEEecCccCCCCCCEEEccCCcceecCCccccCCCCCCEEeccCCc---ccccCccccCCCCCC
Q 037488 8 LVGVVPTTIFNVS-TLNSLYLQNVQLQNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNS---FYGFIPNTFGNLRNL 83 (628)
Q Consensus 8 l~~~~p~~~~~l~-~L~~L~l~~n~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~f~~l~~L 83 (628)
.+.+-..+|.+.. .|+.+.+-++ ++.+...+|.++++|+.+.+..|. ++.+...+|.+..+|
T Consensus 51 Vt~Ig~~aF~~~~~~L~sI~iP~s--------------vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L 116 (394)
T 4gt6_A 51 VSKIGDRVFCNYKYVLTSVQIPDT--------------VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSEL 116 (394)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTT--------------CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTC
T ss_pred eeEcCHhhccCCCCcCEEEEECCC--------------eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccc
Confidence 3445566677763 4666665432 333444555555555555555442 444445555555555
Q ss_pred CEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCE
Q 037488 84 NRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIA 163 (628)
Q Consensus 84 ~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~ 163 (628)
+.+.+..+ ++.+.. ..|.++.+|+.+.+..+ +..+...+|..+. .|+.+.+..+ +...-..+|.. .+|+.
T Consensus 117 ~~i~~~~~-~~~I~~-----~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~-~L~~i~~~~~-~~~I~~~aF~~-~~l~~ 186 (394)
T 4gt6_A 117 TDIPILDS-VTEIDS-----EAFHHCEELDTVTIPEG-VTSVADGMFSYCY-SLHTVTLPDS-VTAIEERAFTG-TALTQ 186 (394)
T ss_dssp CBCGGGTT-CSEECT-----TTTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCEEECCTT-CCEECTTTTTT-CCCSE
T ss_pred eeeccCCc-cceehh-----hhhhhhcccccccccce-eeeecccceeccc-ccccccccce-eeEeccccccc-cceeE
Confidence 55554433 222211 23445555555555432 2223333333332 3343333322 22222233332 44555
Q ss_pred EEccCCcCCccccccccCCCCCCEeecccCcccccCCc--------------cccCCCCCCEEEccCCcCcccCCCCccC
Q 037488 164 IYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPD--------------DLCRLAALFQLDLGSNKLSGFVPASFGN 229 (628)
Q Consensus 164 L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~--------------~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 229 (628)
+.+..+-. ..-..+|....++.......+.... ... .+.....+..+.+. +.+......+|..
T Consensus 187 i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~ 263 (394)
T 4gt6_A 187 IHIPAKVT-RIGTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDS 263 (394)
T ss_dssp EEECTTCC-EECTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTT
T ss_pred EEECCccc-ccccchhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeee
Confidence 55543322 2333345555555555443332221 110 01122234444443 3344455667888
Q ss_pred CCCCcEEEccCCcCCcCC-CCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEe
Q 037488 230 LTNLRSLHLGSNQITSIP-STLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLF 308 (628)
Q Consensus 230 l~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 308 (628)
+.+|+.+.+..+. ..+. ..+.+..+|+.+.+.. .++......|.++.+|+.+++..+ ++.+....|.++.+|+.+.
T Consensus 264 c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ 340 (394)
T 4gt6_A 264 CAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIA 340 (394)
T ss_dssp CSSCCEEECCTTC-CEECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccEEeccccc-ceecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEE
Confidence 8888888886543 3343 4556678888888863 455566677888888888888754 5556667888889999998
Q ss_pred CCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEccCCcc
Q 037488 309 LEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVSFNKL 362 (628)
Q Consensus 309 l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l 362 (628)
+..+ ++..-..+|.++.+|+.+++.++.... ..+.....|+.+.+..|.+
T Consensus 341 ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 341 IPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp ECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred ECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 8755 554556788899999999988876532 3456677888887776644
No 397
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.29 E-value=1.7e-13 Score=147.91 Aligned_cols=123 Identities=14% Similarity=0.007 Sum_probs=71.4
Q ss_pred ccccCCccEEEEEEe-cCCcEEEEEEeecc----------chhHHHHHHHHHHHhhcc-cCCCcceeeeeccCCCcc---
Q 037488 434 LIDRGGIGYVYKRRI-HYGMEVAVKVFDLQ----------YREAFKNFDIECDMMKHI-RHRNLIKIISSCSNDDFK--- 498 (628)
Q Consensus 434 ~ig~G~~g~V~~~~~-~~~~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~--- 498 (628)
..+.|+.|.+..++. -.|+.+|||++... .....+.|.+|+++|+++ .|+||++++++++++...
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 456677777766543 45889999999642 123456799999999999 799999999998765422
Q ss_pred ------------------------------------------------------------ccccccccccccCccccccc
Q 037488 499 ------------------------------------------------------------ADFGMAKPLLKEDQSLIQTQ 518 (628)
Q Consensus 499 ------------------------------------------------------------~DFGla~~~~~~~~~~~~~~ 518 (628)
+|||+|+...... ....+
T Consensus 321 MEyv~G~~L~d~i~~~~~l~~~~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--~~~~t 398 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGEEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--SWPTN 398 (569)
T ss_dssp EECCCSEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC-----CCSHH
T ss_pred EecCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC--ccccC
Confidence 4999999764432 22345
Q ss_pred ccccccccCccccccCccCcccchhhHhHHHHHHhhCCCCC
Q 037488 519 TLATIGYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPT 559 (628)
Q Consensus 519 ~~gt~~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~ 559 (628)
.+||++|||||++.+ .+..++|+||.|++++++.++..++
T Consensus 399 ~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 399 LVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp HHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred ceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 689999999999875 5778899999999999887765543
No 398
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.25 E-value=1.7e-11 Score=124.74 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=46.4
Q ss_pred EccCC-cCCcCCCCccCCCCCcEEEcCC-CCCcCCCCCcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcC
Q 037488 237 HLGSN-QITSIPSTLLNLKDILYLNLSS-NFFTGPLPLEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRL 314 (628)
Q Consensus 237 ~L~~n-~l~~lp~~~~~l~~L~~L~l~~-n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~ 314 (628)
+++++ .|+++|. +..+++|++|+|++ |.+++..+..|.++++|+.|+|++|++++..|..|..+++|++|+|++|++
T Consensus 14 ~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 92 (347)
T 2ifg_A 14 RCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNAL 92 (347)
T ss_dssp ECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCC
T ss_pred EcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCcc
Confidence 44444 4444444 44444444444443 444444444444444444444444444444444444444444444444444
Q ss_pred cccCChhhcCCCCCCEEECcCCccc
Q 037488 315 QGSIPDSIGDLINLKSLDLSNNNLS 339 (628)
Q Consensus 315 ~~~~~~~~~~l~~L~~L~l~~N~l~ 339 (628)
++..+..|..++ |+.|+|.+|.+.
T Consensus 93 ~~~~~~~~~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 93 ESLSWKTVQGLS-LQELVLSGNPLH 116 (347)
T ss_dssp SCCCSTTTCSCC-CCEEECCSSCCC
T ss_pred ceeCHHHcccCC-ceEEEeeCCCcc
Confidence 433333333333 444444444443
No 399
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=3.7e-11 Score=122.17 Aligned_cols=103 Identities=23% Similarity=0.210 Sum_probs=70.9
Q ss_pred EEEccCC-cCCccccccccCCCCCCEeeccc-CcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccC
Q 037488 163 AIYLGGN-KLNGSIPIALGKLQKLQLLNLEY-NQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGS 240 (628)
Q Consensus 163 ~L~L~~n-~l~~~~p~~~~~l~~L~~L~L~~-n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 240 (628)
.++++++ .++ .+|. +..+++|++|+|++ |++.+..+..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3466666 665 3555 77777777777775 777766666677777777777777777777777777777777777777
Q ss_pred CcCCcCCCCccCCCCCcEEEcCCCCCc
Q 037488 241 NQITSIPSTLLNLKDILYLNLSSNFFT 267 (628)
Q Consensus 241 n~l~~lp~~~~~l~~L~~L~l~~n~l~ 267 (628)
|+|+.+|..++....|++|+|.+|.+.
T Consensus 90 N~l~~~~~~~~~~~~L~~l~l~~N~~~ 116 (347)
T 2ifg_A 90 NALESLSWKTVQGLSLQELVLSGNPLH 116 (347)
T ss_dssp SCCSCCCSTTTCSCCCCEEECCSSCCC
T ss_pred CccceeCHHHcccCCceEEEeeCCCcc
Confidence 777777665554334777777776665
No 400
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.21 E-value=3e-12 Score=137.42 Aligned_cols=130 Identities=13% Similarity=0.093 Sum_probs=88.6
Q ss_pred CcccccccCCccEEEEEEecCCcEEEEEEeeccc--------hhHHHHHHHHHHHhhcccCCCcc--eeeeeccCC----
Q 037488 430 SENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQY--------REAFKNFDIECDMMKHIRHRNLI--KIISSCSND---- 495 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv--~l~~~~~~~---- 495 (628)
...+.||+|+||.||+|... ++.+|+|+..... ....+.+.+|++++++++||||+ +++++..+.
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 44578999999999999554 7889999864321 11245689999999999999999 444432111
Q ss_pred -------C-------------------------------------------ccccccccccccccCccc-----cccccc
Q 037488 496 -------D-------------------------------------------FKADFGMAKPLLKEDQSL-----IQTQTL 520 (628)
Q Consensus 496 -------~-------------------------------------------~~~DFGla~~~~~~~~~~-----~~~~~~ 520 (628)
+ ..+|||+|+......... ...+.+
T Consensus 418 mE~~~ggsL~~~l~~~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~ 497 (540)
T 3en9_A 418 MSYINGKLAKDVIEDNLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVL 497 (540)
T ss_dssp EECCCSEEHHHHSTTCTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhc
Confidence 1 014999999764322111 123567
Q ss_pred ccccccCcccccc--CccCcccchhhHhHHHHHHhhCCCCCC
Q 037488 521 ATIGYMAPEYGRE--GRVSTNGDVYSFGIMLIETFTRKKPTD 560 (628)
Q Consensus 521 gt~~y~aPE~~~~--~~~~~~~DVwS~Gvvl~e~ltg~~p~~ 560 (628)
||++|||||++.+ ..|+.++|+||..+-..+.+.++.+|.
T Consensus 498 GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 498 STHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred CCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 9999999999987 568999999999999999998888774
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.9e-13 Score=139.68 Aligned_cols=172 Identities=19% Similarity=0.170 Sum_probs=83.7
Q ss_pred CCCCEEEccCCcCCccccccccC-----CCCCCEeecccCcccccCCccc-cCCCCCCEEEccCCcCcccCCCCc-----
Q 037488 159 TNLIAIYLGGNKLNGSIPIALGK-----LQKLQLLNLEYNQLEGSIPDDL-CRLAALFQLDLGSNKLSGFVPASF----- 227 (628)
Q Consensus 159 ~~L~~L~L~~n~l~~~~p~~~~~-----l~~L~~L~L~~n~l~~~~p~~~-~~l~~L~~L~L~~n~l~~~~~~~~----- 227 (628)
+.|+.|+|++|.++......+.. .++|++|+|++|.+.......+ ..+.+|+.|+|++|.++......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777665432222221 2466666666666543211111 123345555555555543222111
Q ss_pred cCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcCCCC----CccccCCCCC
Q 037488 228 GNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNFSGV----IPITIGYLKD 303 (628)
Q Consensus 228 ~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~ 303 (628)
...++|+.|+|++|.|+.... ..++..+...++|++|+|++|.++.. +...+...++
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~-------------------~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~ 212 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGV-------------------AVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQ 212 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHH-------------------HHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSC
T ss_pred hcCCccceeeCCCCCCChHHH-------------------HHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCC
Confidence 123344444444444432100 01112223444555555555555421 1233444566
Q ss_pred CCEEeCCCCcCccc----CChhhcCCCCCCEEECcCCcccccCchhhhcC
Q 037488 304 LQYLFLEYNRLQGS----IPDSIGDLINLKSLDLSNNNLSGIIPISLEKL 349 (628)
Q Consensus 304 L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 349 (628)
|++|+|++|.++.. +...+...++|+.|+|++|.|+......+..+
T Consensus 213 L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~~ 262 (372)
T 3un9_A 213 LQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVLRDL 262 (372)
T ss_dssp CCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHHHHC
T ss_pred cCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHHHHH
Confidence 77777777777542 33444556778888888888775544444443
No 402
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.15 E-value=8.4e-09 Score=106.01 Aligned_cols=296 Identities=13% Similarity=0.114 Sum_probs=155.6
Q ss_pred CCCCEEEccCCcceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCC
Q 037488 33 QNLEELLLWGNNFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYL 112 (628)
Q Consensus 33 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L 112 (628)
.+|+.+.+.. .++.+...+|.++.+|+.++|.. .++.|...+|.+. +|+.+.+..+ ++.+.. .+|.+. +|
T Consensus 46 ~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~-----~aF~~~-~L 115 (379)
T 4h09_A 46 DRISEVRVNS-GITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGD-----YVFQGT-DL 115 (379)
T ss_dssp GGCSEEEECT-TEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECT-----TTTTTC-CC
T ss_pred cCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEecc-----ceeccC-Cc
Confidence 3456666643 46667777888888888888864 4777778888876 6777777544 444332 234443 68
Q ss_pred cEEEcccCCCCCCCchHHhccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeeccc
Q 037488 113 KYFSFSNNSLDGILPRAIGNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEY 192 (628)
Q Consensus 113 ~~L~l~~n~l~~~~p~~~~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~ 192 (628)
+.+.+..+ +..+...+|... .++...+.. .++..-...|..+.+++.+.+..+.......... . .
T Consensus 116 ~~i~lp~~-~~~i~~~~F~~~--~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~---------~--~ 180 (379)
T 4h09_A 116 DDFEFPGA-TTEIGNYIFYNS--SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYV---------L--Y 180 (379)
T ss_dssp SEEECCTT-CCEECTTTTTTC--CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTE---------E--E
T ss_pred ccccCCCc-cccccccccccc--eeeeeeccc-eeeccccchhcccccccccccccccceeecccce---------e--c
Confidence 88887654 333333444433 233222221 2233334455666666666655443321110000 0 0
Q ss_pred CcccccCCccccCCCCCCEEEccCCcCcccCCCCccCCCCCcEEEccCCcCCcCC-CCccCCCCCcEEEcCCCCCcCCCC
Q 037488 193 NQLEGSIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLTNLRSLHLGSNQITSIP-STLLNLKDILYLNLSSNFFTGPLP 271 (628)
Q Consensus 193 n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~lp-~~~~~l~~L~~L~l~~n~l~~~~~ 271 (628)
+.. ......+.....+..+.+.... .......+....+|+.+.+..+ +..++ ..+.....|+.+.+..+ ++....
T Consensus 181 ~~~-~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~ 256 (379)
T 4h09_A 181 NKN-KTILESYPAAKTGTEFTIPSTV-KTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGS 256 (379)
T ss_dssp ETT-SSEEEECCTTCCCSEEECCTTC-CEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECT
T ss_pred ccc-cceeccccccccccccccccce-eEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCc
Confidence 000 0011122333344444433222 2233445555555666555433 33332 23444556666666544 333444
Q ss_pred CcccCCccccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCC
Q 037488 272 LEIGNLKVLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLD 351 (628)
Q Consensus 272 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~ 351 (628)
..|.+..+|+.+.+..+ +.......|.++.+|+.+.+.++.++.....+|.++.+|+.+.|..+ ++.+...+|.++.+
T Consensus 257 ~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~ 334 (379)
T 4h09_A 257 FLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKA 334 (379)
T ss_dssp TTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTT
T ss_pred cccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCC
Confidence 55666666666666533 33344455666667777777666665555566677777777776543 55555566666677
Q ss_pred CCEEEccC
Q 037488 352 LKDINVSF 359 (628)
Q Consensus 352 L~~l~l~~ 359 (628)
|+.+.+..
T Consensus 335 L~~i~ip~ 342 (379)
T 4h09_A 335 LSTISYPK 342 (379)
T ss_dssp CCCCCCCT
T ss_pred CCEEEECC
Confidence 77666644
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=2.9e-12 Score=130.84 Aligned_cols=109 Identities=17% Similarity=0.147 Sum_probs=62.1
Q ss_pred CCCEEEccCCcCCccccccc-----cCCCCCCEeecccCccccc----CCccccCCCCCCEEEccCCcCccc----CCCC
Q 037488 160 NLIAIYLGGNKLNGSIPIAL-----GKLQKLQLLNLEYNQLEGS----IPDDLCRLAALFQLDLGSNKLSGF----VPAS 226 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~-----~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~~~~ 226 (628)
+|+.|+|++|.++......+ ...++|++|+|++|.++.. ++..+...++|++|+|++|.++.. ++..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 45555555555543222222 1345566666666665431 223334566666666666666532 2344
Q ss_pred ccCCCCCcEEEccCCcCCc-----CCCCccCCCCCcEEEcCCCCCcC
Q 037488 227 FGNLTNLRSLHLGSNQITS-----IPSTLLNLKDILYLNLSSNFFTG 268 (628)
Q Consensus 227 ~~~l~~L~~L~L~~n~l~~-----lp~~~~~l~~L~~L~l~~n~l~~ 268 (628)
+...++|+.|+|++|.|+. +...+...++|++|+|++|.++.
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 5556677777777777764 23334455778888888887764
No 404
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.03 E-value=2.3e-08 Score=102.67 Aligned_cols=269 Identities=11% Similarity=0.082 Sum_probs=169.5
Q ss_pred ccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccCCCCCCCchHH
Q 037488 51 SFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNNSLDGILPRAI 130 (628)
Q Consensus 51 ~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~p~~~ 130 (628)
.++....+|+.+.+. ..++.|...+|.++.+|+.+.|..+ ++.+.. .+|.++ +|+.+.+..+ ++.+...+|
T Consensus 40 ~~~~~~~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~-----~aF~~c-~l~~i~~~~~-l~~I~~~aF 110 (379)
T 4h09_A 40 PWYKDRDRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGD-----GAFADT-KLQSYTGMER-VKKFGDYVF 110 (379)
T ss_dssp TTGGGGGGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECT-----TTTTTC-CCCEEEECTT-CCEECTTTT
T ss_pred cccccccCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEech-----hhhcCC-CCceEECCce-eeEecccee
Confidence 345667789998887 4577888889999999999999755 655543 356666 5666665432 333333333
Q ss_pred hccccccceeeccCCcccccCCccccCCCCCCEEEccCCcCCccccccccCCCCCCEeecccCcccccCCccccCCCCCC
Q 037488 131 GNLSQSMEIFWMHSCNISGGIPEEISNLTNLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYNQLEGSIPDDLCRLAALF 210 (628)
Q Consensus 131 ~~l~~~l~~l~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 210 (628)
.. .+|+.+.+..+ +...-...|.+. +|+.+.+..+ ++......|..+..++
T Consensus 111 ~~--------------------------~~L~~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~ 161 (379)
T 4h09_A 111 QG--------------------------TDLDDFEFPGA-TTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLE 161 (379)
T ss_dssp TT--------------------------CCCSEEECCTT-CCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCC
T ss_pred cc--------------------------CCcccccCCCc-cccccccccccc-eeeeeeccce-eeccccchhccccccc
Confidence 32 23444444332 111112223222 3333333222 2223333444555555
Q ss_pred EEEccCCcCcc------------cCCCCccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCc
Q 037488 211 QLDLGSNKLSG------------FVPASFGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLK 278 (628)
Q Consensus 211 ~L~L~~n~l~~------------~~~~~~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 278 (628)
.+.+..+.... .....+.....+..+.+...........+....+|+.+.+..+ ++......|.+..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~ 240 (379)
T 4h09_A 162 KIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMK 240 (379)
T ss_dssp EEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCS
T ss_pred ccccccccceeecccceecccccceeccccccccccccccccceeEEeecccccccccceeeeccc-eeEEccccccCCc
Confidence 55444332211 1112344455566666554433333445566788899888765 4445667788899
Q ss_pred cccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCcCcccCChhhcCCCCCCEEECcCCcccccCchhhhcCCCCCEEEcc
Q 037488 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNRLQGSIPDSIGDLINLKSLDLSNNNLSGIIPISLEKLLDLKDINVS 358 (628)
Q Consensus 279 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 358 (628)
.|+.+.+..+ ++.+....|..+.+|+.+.+..+ +.......|.++.+|+.+.+.++.++.+....|.++.+|+.+++.
T Consensus 241 ~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 241 ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECC
T ss_pred cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcC
Confidence 9999999876 55566778888999999999765 554666789999999999999999988888999999999999997
Q ss_pred CC
Q 037488 359 FN 360 (628)
Q Consensus 359 ~N 360 (628)
.+
T Consensus 319 ~~ 320 (379)
T 4h09_A 319 TA 320 (379)
T ss_dssp TT
T ss_pred cc
Confidence 55
No 405
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.72 E-value=2e-09 Score=108.93 Aligned_cols=84 Identities=20% Similarity=0.222 Sum_probs=54.9
Q ss_pred CCccccEEEcCCCcCCCCCcccc---CCCCCCCEEeCCCCcCccc----CChhhcCCCCCCEEECcCCcccccCchhhhc
Q 037488 276 NLKVLIKIDLSMNNFSGVIPITI---GYLKDLQYLFLEYNRLQGS----IPDSIGDLINLKSLDLSNNNLSGIIPISLEK 348 (628)
Q Consensus 276 ~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~ 348 (628)
.+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.+... ++..+..+++|+.|++++|.++...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 45677777777777653222111 2467888899988888753 2333455688999999999887544344443
Q ss_pred -CCCCCEEEccCCc
Q 037488 349 -LLDLKDINVSFNK 361 (628)
Q Consensus 349 -l~~L~~l~l~~N~ 361 (628)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 3 4668888876
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.68 E-value=5e-09 Score=105.96 Aligned_cols=136 Identities=19% Similarity=0.190 Sum_probs=80.6
Q ss_pred ccCCCCCcEEEccCCcCCcCCCCccCCCCCcEEEcCCCCCcCCCCCcc--cCCccccEEEcCC--CcCCCC-----Cccc
Q 037488 227 FGNLTNLRSLHLGSNQITSIPSTLLNLKDILYLNLSSNFFTGPLPLEI--GNLKVLIKIDLSM--NNFSGV-----IPIT 297 (628)
Q Consensus 227 ~~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~--~~l~~L~~L~Ls~--N~l~~~-----~p~~ 297 (628)
+..+++|+.|+|++|.-..++. + .+++|++|++..+.++......+ ..+++|+.|+|+. |...+. +...
T Consensus 168 l~~~P~L~~L~L~g~~~l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~ 245 (362)
T 2ra8_A 168 LDAMPLLNNLKIKGTNNLSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPL 245 (362)
T ss_dssp HHTCTTCCEEEEECCBTCBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGG
T ss_pred HhcCCCCcEEEEeCCCCceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHH
Confidence 3445566666665552123333 2 25566666666655432211112 2466667766642 211111 0011
Q ss_pred c--CCCCCCCEEeCCCCcCcccCChhhc---CCCCCCEEECcCCcccccC----chhhhcCCCCCEEEccCCccee
Q 037488 298 I--GYLKDLQYLFLEYNRLQGSIPDSIG---DLINLKSLDLSNNNLSGII----PISLEKLLDLKDINVSFNKLEG 364 (628)
Q Consensus 298 ~--~~l~~L~~L~l~~n~~~~~~~~~~~---~l~~L~~L~l~~N~l~~~~----~~~~~~l~~L~~l~l~~N~l~~ 364 (628)
+ ..+++|++|+|.+|.+....+..+. .+++|++|+|+.|.+.+.- +..+..+++|+.|++++|.++.
T Consensus 246 l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 246 FSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp SCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred HhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 2 3478999999999998753333332 5789999999999997642 3334567899999999998763
No 407
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=98.63 E-value=1.8e-08 Score=98.70 Aligned_cols=72 Identities=14% Similarity=0.094 Sum_probs=54.1
Q ss_pred hhhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccch------------------hHHHHHHHHHHHhh
Q 037488 417 LTYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYR------------------EAFKNFDIECDMMK 478 (628)
Q Consensus 417 ~~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~ 478 (628)
+...........|...+.||+|+||.||+|...+|+.||||+++.... .....+.+|+++++
T Consensus 80 ~~l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~ 159 (282)
T 1zar_A 80 YSLHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQ 159 (282)
T ss_dssp HHHHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHH
Confidence 344455566677778899999999999999987799999999964321 13456899999999
Q ss_pred cccCCCccee
Q 037488 479 HIRHRNLIKI 488 (628)
Q Consensus 479 ~l~h~niv~l 488 (628)
+++|+++...
T Consensus 160 ~l~~~~v~~~ 169 (282)
T 1zar_A 160 KLQGLAVPKV 169 (282)
T ss_dssp HTTTSSSCCE
T ss_pred hccCCCcCeE
Confidence 9985544443
No 408
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.27 E-value=1.4e-07 Score=90.40 Aligned_cols=39 Identities=26% Similarity=0.289 Sum_probs=18.2
Q ss_pred CCCCcEEEcCCCCCcCC--CCCcccCCccccEEEcCCCcCC
Q 037488 253 LKDILYLNLSSNFFTGP--LPLEIGNLKVLIKIDLSMNNFS 291 (628)
Q Consensus 253 l~~L~~L~l~~n~l~~~--~~~~~~~l~~L~~L~Ls~N~l~ 291 (628)
+++|+.|+|++|.+++. +|..+..+++|+.|+|++|+++
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~ 209 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELK 209 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCC
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccC
Confidence 34455555555555442 2233344455555555555544
No 409
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=1.8e-07 Score=85.20 Aligned_cols=113 Identities=17% Similarity=0.124 Sum_probs=62.3
Q ss_pred cccCCCCCCEEEccCC-cCCcc----ccccccCCCCCCEeecccCccccc----CCccccCCCCCCEEEccCCcCccc--
Q 037488 154 EISNLTNLIAIYLGGN-KLNGS----IPIALGKLQKLQLLNLEYNQLEGS----IPDDLCRLAALFQLDLGSNKLSGF-- 222 (628)
Q Consensus 154 ~~~~l~~L~~L~L~~n-~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~L~~n~l~~~-- 222 (628)
.+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.|...
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 4556677778888877 66532 233455566777777777776532 122334445666777777766542
Q ss_pred --CCCCccCCCCCcEEEc--cCCcCCc-----CCCCccCCCCCcEEEcCCCCC
Q 037488 223 --VPASFGNLTNLRSLHL--GSNQITS-----IPSTLLNLKDILYLNLSSNFF 266 (628)
Q Consensus 223 --~~~~~~~l~~L~~L~L--~~n~l~~-----lp~~~~~l~~L~~L~l~~n~l 266 (628)
+...+...++|++|+| ++|.+.. +...+...++|++|++++|.+
T Consensus 111 ~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 111 LALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSH
T ss_pred HHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCC
Confidence 2334455556666666 5565543 222223334555555555544
No 410
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.19 E-value=2.3e-07 Score=84.51 Aligned_cols=16 Identities=25% Similarity=0.260 Sum_probs=8.3
Q ss_pred hcCCCCCEEEccCCcc
Q 037488 347 EKLLDLKDINVSFNKL 362 (628)
Q Consensus 347 ~~l~~L~~l~l~~N~l 362 (628)
...++|++|++++|.+
T Consensus 148 ~~n~~L~~L~L~~n~i 163 (185)
T 1io0_A 148 EKNTTLLKFGYHFTQQ 163 (185)
T ss_dssp HHCSSCCEEECCCSSH
T ss_pred HhCCCcCEEeccCCCC
Confidence 3345555555555544
No 411
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.15 E-value=5.5e-07 Score=86.19 Aligned_cols=78 Identities=22% Similarity=0.306 Sum_probs=41.7
Q ss_pred CCCCCCEeecccCcccc--cCCccccCCCCCCEEEccCCcCcccCCCCccCCC--CCcEEEccCCcCCc-CCC-------
Q 037488 181 KLQKLQLLNLEYNQLEG--SIPDDLCRLAALFQLDLGSNKLSGFVPASFGNLT--NLRSLHLGSNQITS-IPS------- 248 (628)
Q Consensus 181 ~l~~L~~L~L~~n~l~~--~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~--~L~~L~L~~n~l~~-lp~------- 248 (628)
++++|+.|+|++|+|.+ .+|..+..+++|+.|+|++|+|++. ..+..+. +|+.|+|++|.+.. +|.
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 45566666666666654 2234445566666666666666543 2223333 66666666666653 331
Q ss_pred CccCCCCCcEEE
Q 037488 249 TLLNLKDILYLN 260 (628)
Q Consensus 249 ~~~~l~~L~~L~ 260 (628)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 133456666654
No 412
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.54 E-value=4.5e-05 Score=67.51 Aligned_cols=83 Identities=12% Similarity=0.074 Sum_probs=46.0
Q ss_pred cccEEEcCCCcCCCCCccccCCCCCCCEEeCCCCc-CcccCChhhcCC----CCCCEEECcCCc-ccccCchhhhcCCCC
Q 037488 279 VLIKIDLSMNNFSGVIPITIGYLKDLQYLFLEYNR-LQGSIPDSIGDL----INLKSLDLSNNN-LSGIIPISLEKLLDL 352 (628)
Q Consensus 279 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-~~~~~~~~~~~l----~~L~~L~l~~N~-l~~~~~~~~~~l~~L 352 (628)
.|+.||++++.++..--..+..+++|++|+|++|. ++..--..+..+ ++|+.|++++|. |+..--..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 45566666665544333344566666666666664 443222334443 257777777653 554333345566777
Q ss_pred CEEEccCCc
Q 037488 353 KDINVSFNK 361 (628)
Q Consensus 353 ~~l~l~~N~ 361 (628)
+.|++++++
T Consensus 142 ~~L~L~~c~ 150 (176)
T 3e4g_A 142 KYLFLSDLP 150 (176)
T ss_dssp CEEEEESCT
T ss_pred CEEECCCCC
Confidence 777776653
No 413
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.41 E-value=3.9e-05 Score=67.90 Aligned_cols=34 Identities=15% Similarity=-0.050 Sum_probs=17.0
Q ss_pred CCCEEEccCCcCCccccccccCCCCCCEeecccC
Q 037488 160 NLIAIYLGGNKLNGSIPIALGKLQKLQLLNLEYN 193 (628)
Q Consensus 160 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n 193 (628)
.|+.||++++.++..--..+..+++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555554332233445555555555555
No 414
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=97.34 E-value=0.00014 Score=69.74 Aligned_cols=59 Identities=15% Similarity=0.190 Sum_probs=45.6
Q ss_pred cCCCcccccccCCccEEEEEEe-cCCcE--EEEEEeeccch------------------------hHHHHHHHHHHHhhc
Q 037488 427 NGFSENNLIDRGGIGYVYKRRI-HYGME--VAVKVFDLQYR------------------------EAFKNFDIECDMMKH 479 (628)
Q Consensus 427 ~~~~~~~~ig~G~~g~V~~~~~-~~~~~--vavK~~~~~~~------------------------~~~~~~~~E~~~l~~ 479 (628)
.-|+..+.||+|+||.||+|.. .+|+. ||||+++.... .....+.+|++++++
T Consensus 47 ~~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 126 (258)
T 1zth_A 47 YITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLER 126 (258)
T ss_dssp SEEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHH
Confidence 3466778999999999999998 77999 99998753211 112357899999999
Q ss_pred ccCCCc
Q 037488 480 IRHRNL 485 (628)
Q Consensus 480 l~h~ni 485 (628)
++|+++
T Consensus 127 l~~~~i 132 (258)
T 1zth_A 127 AKEAGV 132 (258)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 998864
No 415
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.92 E-value=0.0018 Score=54.46 Aligned_cols=54 Identities=26% Similarity=0.305 Sum_probs=28.7
Q ss_pred EEEccCCcCC--cCCCCccCCCCCcEEEcCCCCCcCCCCCcccCCccccEEEcCCCcC
Q 037488 235 SLHLGSNQIT--SIPSTLLNLKDILYLNLSSNFFTGPLPLEIGNLKVLIKIDLSMNNF 290 (628)
Q Consensus 235 ~L~L~~n~l~--~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 290 (628)
.++.+++.++ .+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 5566666666 5664432 2455555555555554444455555555555555543
No 416
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.79 E-value=0.0019 Score=54.35 Aligned_cols=55 Identities=16% Similarity=0.183 Sum_probs=28.6
Q ss_pred EEEccCCcce-ecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCccc
Q 037488 37 ELLLWGNNFS-GTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDNYL 93 (628)
Q Consensus 37 ~L~ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N~l 93 (628)
.++.+++.++ ..+|..+ -++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4555555554 1233221 12456666666666655555555555555555555544
No 417
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=96.79 E-value=0.00046 Score=69.48 Aligned_cols=43 Identities=12% Similarity=0.043 Sum_probs=35.5
Q ss_pred hhHHHHHhhcCCCcccccccCCccEEEEEEecCCcEEEEEEee
Q 037488 418 TYLELFQATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFD 460 (628)
Q Consensus 418 ~~~~l~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~ 460 (628)
.+..+.....-|++...||+|+||.||+|...+|+.||||+++
T Consensus 86 AL~~L~~rg~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r 128 (397)
T 4gyi_A 86 ALHTHAARKDVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHR 128 (397)
T ss_dssp HHHHHHHTTSCSEEEEEEEECSSEEEEEEECTTCCEEEEEEEC
T ss_pred HHHHHHHCCCEEEecCEeeeCCceEEEEEECCCCCEEEEEEEe
Confidence 3344445455689999999999999999999889999999875
No 418
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.29 E-value=0.0018 Score=58.34 Aligned_cols=62 Identities=19% Similarity=0.200 Sum_probs=35.1
Q ss_pred CCCCCEEeCCCCcCccc----CChhhcCCCCCCEEECcCCc---ccc----cCchhhhcCCCCCEEEccCCcc
Q 037488 301 LKDLQYLFLEYNRLQGS----IPDSIGDLINLKSLDLSNNN---LSG----IIPISLEKLLDLKDINVSFNKL 362 (628)
Q Consensus 301 l~~L~~L~l~~n~~~~~----~~~~~~~l~~L~~L~l~~N~---l~~----~~~~~~~~l~~L~~l~l~~N~l 362 (628)
-+.|++|+|++|.|... +-..+..-+.|+.|+|++|. +.. .+...+..-+.|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34566666666666431 22334444567777777543 221 1233456667788888877654
No 419
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.27 E-value=0.0011 Score=59.67 Aligned_cols=84 Identities=14% Similarity=0.102 Sum_probs=41.5
Q ss_pred CCCCCCEEEccCC-cCCc----cccccccCCCCCCEeecccCcccccCC----ccccCCCCCCEEEccCCcCccc----C
Q 037488 157 NLTNLIAIYLGGN-KLNG----SIPIALGKLQKLQLLNLEYNQLEGSIP----DDLCRLAALFQLDLGSNKLSGF----V 223 (628)
Q Consensus 157 ~l~~L~~L~L~~n-~l~~----~~p~~~~~l~~L~~L~L~~n~l~~~~p----~~~~~l~~L~~L~L~~n~l~~~----~ 223 (628)
+-+.|+.|+|++| .|.. .+-.++..-+.|+.|+|++|+|...-- +.+..-+.|+.|+|++|.|... +
T Consensus 39 ~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~al 118 (197)
T 1pgv_A 39 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 118 (197)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred cCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHH
Confidence 4456677777664 5542 122334455566666666666653211 1222335566666666665432 1
Q ss_pred CCCccCCCCCcEEEccC
Q 037488 224 PASFGNLTNLRSLHLGS 240 (628)
Q Consensus 224 ~~~~~~l~~L~~L~L~~ 240 (628)
...+..-+.|+.|+|++
T Consensus 119 a~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 119 LRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHTTTTCCCSEEECCC
T ss_pred HHHHhhCCceeEEECCC
Confidence 12233334455555554
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=93.28 E-value=0.086 Score=50.97 Aligned_cols=62 Identities=10% Similarity=-0.009 Sum_probs=47.8
Q ss_pred CcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCC---Ccceeeee
Q 037488 430 SENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHR---NLIKIISS 491 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~ 491 (628)
...+.+|.|.++.||++...+|+.++||+...........|.+|++.|+.++|. .+.+++++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~ 82 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW 82 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEe
Confidence 445689999999999998888999999996543222335688999999999875 46666655
No 421
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=91.33 E-value=0.29 Score=46.24 Aligned_cols=70 Identities=16% Similarity=0.131 Sum_probs=52.6
Q ss_pred HhhcCCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhccc-CCCcceeeeeccC
Q 037488 424 QATNGFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR-HRNLIKIISSCSN 494 (628)
Q Consensus 424 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 494 (628)
....+|......+.|+++.||++... ++.+++|+...........+.+|+++++.+. |..+.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~ 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERH 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 34467888888888999999998755 6889999986532223345889999999884 6677788887754
No 422
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=87.42 E-value=0.069 Score=55.48 Aligned_cols=59 Identities=7% Similarity=-0.061 Sum_probs=16.7
Q ss_pred ccccccCCccEEEEEEecC-CcEEEE------EEeeccc--hhHHHHHHHHHHHhhcccCCCcceeeeecc
Q 037488 432 NNLIDRGGIGYVYKRRIHY-GMEVAV------KVFDLQY--REAFKNFDIECDMMKHIRHRNLIKIISSCS 493 (628)
Q Consensus 432 ~~~ig~G~~g~V~~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 493 (628)
.+.+| ||.||+|.+.. ...||| |..+... .+....|.+|..+++..+|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 45565 99999998843 467888 6654322 233456889999999999999999987643
No 423
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=85.63 E-value=0.74 Score=43.17 Aligned_cols=65 Identities=9% Similarity=0.045 Sum_probs=44.1
Q ss_pred CCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCCc--ceeeeeccCC
Q 037488 428 GFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRNL--IKIISSCSND 495 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~~ 495 (628)
+|......+.|..+.||++...+|+.+++|..... ....+.+|+++++.+++.++ .++++++..+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~ 87 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEA 87 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred CCceEecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence 34433333456669999998777888999997543 22457789999999865554 4577766543
No 424
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=83.37 E-value=0.98 Score=43.32 Aligned_cols=54 Identities=11% Similarity=-0.013 Sum_probs=41.8
Q ss_pred CCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhccc
Q 037488 428 GFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIR 481 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~ 481 (628)
.......+|.|..+.||+.+..+|+.|.+|+-..........|.+|.+.|+.+.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence 445567889999999999999999999999865433333345788999998884
No 425
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=74.13 E-value=3.4 Score=32.23 Aligned_cols=47 Identities=15% Similarity=0.163 Sum_probs=29.4
Q ss_pred cceecCCccccCCCCCCEEeccCCcccccCccccCCCCCCCEEEccCc
Q 037488 44 NFSGTIPSFIFNASKLSRLELQMNSFYGFIPNTFGNLRNLNRLGLNDN 91 (628)
Q Consensus 44 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~f~~l~~L~~L~L~~N 91 (628)
.++.+-..+|.++++|+.+.+-. .++.|...+|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcCC
Confidence 44455556667777777776664 355566666777777776666543
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=60.59 E-value=7.8 Score=38.84 Aligned_cols=61 Identities=15% Similarity=0.124 Sum_probs=38.6
Q ss_pred ccccccCCccEEEEEEec-CCcEEEEEEeeccch-------hHHHHHHHHHHHhhcccC--CCc-ceeeeec
Q 037488 432 NNLIDRGGIGYVYKRRIH-YGMEVAVKVFDLQYR-------EAFKNFDIECDMMKHIRH--RNL-IKIISSC 492 (628)
Q Consensus 432 ~~~ig~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~ni-v~l~~~~ 492 (628)
.+.+|.|.++.||++... +++.++||....... .....+.+|.++++.+.+ |.. .+++.+.
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d 106 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD 106 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc
Confidence 467999999999999763 478899998643211 122346779998887742 333 3555443
No 427
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=59.13 E-value=7.8 Score=38.21 Aligned_cols=65 Identities=11% Similarity=0.143 Sum_probs=44.1
Q ss_pred CcccccccCCccEEEEEEecCCcEEEEEEee--ccc-hhHHHHHHHHHHHhhccc--CCCcceeeeeccCC
Q 037488 430 SENNLIDRGGIGYVYKRRIHYGMEVAVKVFD--LQY-REAFKNFDIECDMMKHIR--HRNLIKIISSCSND 495 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 495 (628)
...+.++.|.++.||+.... +..+++|+.. ... ......+.+|.++++.++ +..+.++++++.+.
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~ 110 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDE 110 (359)
T ss_dssp CEEEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCT
T ss_pred ceEEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCC
Confidence 34567899999999998876 4578888775 322 122356788999999997 45578888888765
No 428
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=58.09 E-value=14 Score=28.67 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=39.6
Q ss_pred CCcccccCccccCCCCCCCEEEccCccccCCCCCCcccccccCCCCCcEEEcccC
Q 037488 66 MNSFYGFIPNTFGNLRNLNRLGLNDNYLTSSTPKLNFLSSLSNCKYLKYFSFSNN 120 (628)
Q Consensus 66 ~N~l~~~~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~~l~~L~~L~l~~n 120 (628)
+..++.|...+|.++.+|+.+.+..+ ++.+.. .+|.+|.+|+.+.+.+.
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~-----~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYD-----GMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCT-----TSSTTCTTCCCEEECCS
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcH-----HHHhccCCccEEEEcCC
Confidence 45677888899999999999999876 555533 46899999999998764
No 429
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=36.44 E-value=70 Score=30.60 Aligned_cols=61 Identities=13% Similarity=0.102 Sum_probs=44.0
Q ss_pred CcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccC---CCcceeeeeccC
Q 037488 430 SENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRH---RNLIKIISSCSN 494 (628)
Q Consensus 430 ~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~ 494 (628)
.....|+.|.+..+|+.... +..+++|+.... ....+.+|.+.|+.+.. ..+.+.++++..
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~ 102 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS 102 (312)
T ss_dssp CEEEEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC
T ss_pred eeeEEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec
Confidence 34467899999999998764 667888887533 24567889999988842 456677766643
No 430
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=29.11 E-value=70 Score=30.54 Aligned_cols=49 Identities=12% Similarity=0.114 Sum_probs=36.9
Q ss_pred CCCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccC
Q 037488 428 GFSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRH 482 (628)
Q Consensus 428 ~~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h 482 (628)
.....+.++.|..+.||+. |..+++|+.... .....+.+|.++++.+.+
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~ 86 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLEN 86 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTT
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHh
Confidence 5566778999999999987 666888876432 223457899999998876
No 431
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=24.10 E-value=36 Score=30.73 Aligned_cols=52 Identities=13% Similarity=0.172 Sum_probs=27.9
Q ss_pred cccCccccccCccCcccchhhHhHHHHHHhhCCCCCCcccCCCccHHHHHHhh
Q 037488 524 GYMAPEYGREGRVSTNGDVYSFGIMLIETFTRKKPTDEIFSGEMTLKHWVNDL 576 (628)
Q Consensus 524 ~y~aPE~~~~~~~~~~~DVwS~Gvvl~e~ltg~~p~~~~~~~~~~~~~~~~~~ 576 (628)
.+.|||... ...+.+.=|||+|+++|.-+-=..|-+....-...+......+
T Consensus 102 ~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~M 153 (229)
T 2yle_A 102 PPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHM 153 (229)
T ss_dssp -----CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHH
T ss_pred CCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHH
Confidence 456888763 2346788899999999998874444332222233444444433
No 432
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=21.95 E-value=1.8e+02 Score=28.35 Aligned_cols=60 Identities=10% Similarity=0.127 Sum_probs=41.8
Q ss_pred CCcccccccCCccEEEEEEecCCcEEEEEEeeccchhHHHHHHHHHHHhhcccCCC--cceeeeeccC
Q 037488 429 FSENNLIDRGGIGYVYKRRIHYGMEVAVKVFDLQYREAFKNFDIECDMMKHIRHRN--LIKIISSCSN 494 (628)
Q Consensus 429 ~~~~~~ig~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~ 494 (628)
......++.|....+|+... +|+.+++|.-... ..+.+|..+++.+.... +.++++++..
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~ 104 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF 104 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES
T ss_pred CceEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC
Confidence 44556789999999999875 4788889887432 24778888888886543 3455555443
Done!