Query 037494
Match_columns 394
No_of_seqs 280 out of 2756
Neff 9.8
Searched_HMMs 13730
Date Mon Mar 25 22:15:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037494.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037494hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 1.3E-21 9.4E-26 178.3 8.8 226 144-378 50-284 (313)
2 d1p9ag_ c.10.2.7 (G:) von Will 99.8 7.6E-19 5.5E-23 155.9 17.3 186 177-372 15-205 (266)
3 d2omza2 c.10.2.1 (A:33-416) In 99.8 1.6E-18 1.2E-22 161.6 18.1 252 122-394 44-379 (384)
4 d1ogqa_ c.10.2.8 (A:) Polygala 99.8 2.8E-19 2E-23 162.6 8.7 241 121-374 49-303 (313)
5 d1xkua_ c.10.2.7 (A:) Decorin 99.8 1E-17 7.3E-22 151.6 18.6 254 121-392 30-299 (305)
6 d1p9ag_ c.10.2.7 (G:) von Will 99.7 9E-18 6.6E-22 148.9 15.6 174 172-353 31-210 (266)
7 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 1.8E-17 1.3E-21 148.4 16.9 199 172-375 32-238 (284)
8 d2omza2 c.10.2.1 (A:33-416) In 99.7 2.5E-17 1.8E-21 153.4 18.1 165 195-373 219-384 (384)
9 d1h6ua2 c.10.2.1 (A:36-262) In 99.7 3.6E-17 2.6E-21 141.4 15.2 187 169-370 38-225 (227)
10 d1xkua_ c.10.2.7 (A:) Decorin 99.7 1E-16 7.3E-21 144.9 17.5 227 134-377 22-257 (305)
11 d1ozna_ c.10.2.7 (A:) Reticulo 99.7 9E-17 6.6E-21 143.7 15.4 209 176-393 15-230 (284)
12 d2omxa2 c.10.2.1 (A:37-235) In 99.7 4.2E-16 3E-20 131.7 14.3 161 193-367 38-199 (199)
13 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3.7E-16 2.7E-20 133.2 13.7 164 194-371 45-209 (210)
14 d1h6ta2 c.10.2.1 (A:31-240) In 99.7 3E-16 2.2E-20 133.8 13.0 163 172-347 46-209 (210)
15 d1h6ua2 c.10.2.1 (A:36-262) In 99.6 2.8E-15 2.1E-19 129.2 16.2 188 141-347 38-226 (227)
16 d2omxa2 c.10.2.1 (A:37-235) In 99.6 1.6E-15 1.1E-19 128.1 13.5 143 143-297 39-182 (199)
17 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 3.4E-14 2.5E-18 123.4 12.1 191 172-369 29-232 (242)
18 d1xwdc1 c.10.2.7 (C:18-259) Fo 99.5 6.5E-14 4.7E-18 121.6 13.8 198 175-378 11-217 (242)
19 d1dcea3 c.10.2.2 (A:444-567) R 99.5 7.2E-14 5.2E-18 108.0 9.0 98 175-276 1-101 (124)
20 d2astb2 c.10.1.3 (B:2136-2419) 99.4 3.1E-15 2.2E-19 133.5 -0.0 193 169-365 43-252 (284)
21 d1jl5a_ c.10.2.6 (A:) Leucine 99.4 1.2E-12 8.5E-17 119.5 16.2 155 124-298 40-215 (353)
22 d1dcea3 c.10.2.2 (A:444-567) R 99.4 2.5E-13 1.8E-17 105.0 7.6 103 147-258 1-106 (124)
23 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 1.9E-13 1.4E-17 110.8 6.8 105 169-276 15-123 (162)
24 d1a9na_ c.10.2.4 (A:) Spliceso 99.4 2.1E-13 1.5E-17 110.6 6.1 129 139-275 13-149 (162)
25 d2astb2 c.10.1.3 (B:2136-2419) 99.3 4.7E-14 3.4E-18 125.7 0.2 210 141-360 43-268 (284)
26 d1jl5a_ c.10.2.6 (A:) Leucine 99.3 2.2E-11 1.6E-15 110.8 14.6 228 121-376 57-338 (353)
27 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 5.7E-12 4.2E-16 105.1 5.9 120 175-298 11-137 (192)
28 d1w8aa_ c.10.2.7 (A:) Slit {Fr 99.2 4E-11 2.9E-15 99.9 9.1 126 220-353 10-141 (192)
29 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 2.4E-13 1.7E-17 114.1 -5.4 109 186-298 39-151 (198)
30 d1m9la_ c.10.3.1 (A:) Outer ar 99.1 1.9E-12 1.4E-16 108.5 -3.7 108 165-276 41-151 (198)
31 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.9 7.4E-11 5.4E-15 107.5 2.1 233 141-377 28-317 (344)
32 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.9 1.9E-10 1.4E-14 108.1 1.6 107 123-230 3-124 (460)
33 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 5.1E-09 3.7E-13 83.5 9.5 102 173-276 9-114 (156)
34 d2ifga3 c.10.2.7 (A:36-191) Hi 98.8 1.1E-08 7.7E-13 81.7 8.8 84 169-254 28-115 (156)
35 d2ca6a1 c.10.1.2 (A:2-345) Rna 98.8 2.4E-10 1.8E-14 104.0 -1.3 204 165-376 25-287 (344)
36 d1z7xw1 c.10.1.1 (W:1-460) Rib 98.6 3.9E-09 2.8E-13 99.0 1.5 85 121-208 26-125 (460)
37 d1koha1 c.10.2.3 (A:201-362) m 97.7 3.4E-06 2.5E-10 67.1 0.9 83 165-248 58-153 (162)
38 d1koha1 c.10.2.3 (A:201-362) m 97.6 5.8E-07 4.2E-11 71.7 -4.8 80 192-273 62-154 (162)
39 d1pgva_ c.10.1.1 (A:) Tropomod 96.8 0.00077 5.6E-08 53.1 5.7 107 142-249 13-139 (167)
40 d1io0a_ c.10.1.1 (A:) Tropomod 96.4 0.0019 1.4E-07 50.7 5.5 109 141-249 14-140 (166)
41 d1pgva_ c.10.1.1 (A:) Tropomod 96.0 0.0035 2.5E-07 49.1 4.9 87 165-253 8-111 (167)
42 d1io0a_ c.10.1.1 (A:) Tropomod 94.0 0.023 1.7E-06 44.0 4.3 84 165-249 10-110 (166)
No 1
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.84 E-value=1.3e-21 Score=178.30 Aligned_cols=226 Identities=17% Similarity=0.184 Sum_probs=167.4
Q ss_pred CCccEEEEecCCCccchhcchhHHhccCCceeEEEcCC-CCCC-CCcccccCcccccEEecCCCCCcccc-ccccCCCCC
Q 037494 144 MYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGS-AVLD-QFPPGLENLFLLKYLQLNIPTLKCLP-LLICTLLNL 220 (394)
Q Consensus 144 ~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~-~~~~-~lp~~i~~l~~L~~L~l~~~~l~~lp-~~l~~l~~L 220 (394)
.+++.|.+.++.... ...+|+.+.++++|++|++++ |.+. .+|++++++++|++|++++|.+..++ ..+..+.+|
T Consensus 50 ~~v~~L~L~~~~l~g--~~~lp~~l~~L~~L~~L~Ls~~N~l~g~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~~~L 127 (313)
T d1ogqa_ 50 YRVNNLDLSGLNLPK--PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127 (313)
T ss_dssp CCEEEEEEECCCCSS--CEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTC
T ss_pred EEEEEEECCCCCCCC--CCCCChHHhcCccccccccccccccccccccccccccccchhhhccccccccccccccchhhh
Confidence 467888888876652 123444448899999999986 6666 78888999999999999999887654 457788889
Q ss_pred cEEEcc-cCCccccchhhccCccCcEEEeeCCCC-CCCCCCCCCCCCcC-ceeCccccC--CCcchhcCCCCCCCeEEEe
Q 037494 221 ETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITL-PAPPKNYSSSLKNL-IFISALHPS--SCTPDILSRLPTVQTLRIS 295 (394)
Q Consensus 221 ~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~-~~~~p~~l~~l~~L-~~L~~~~~~--~~~~~~l~~l~~L~~L~l~ 295 (394)
++++++ |.....+|..++.+++|++++++ +|. ...+|..++.+.++ +.+....+. +..+..++.+..+ .+++.
T Consensus 128 ~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~-~n~l~~~ip~~~~~l~~l~~~l~~~~n~l~~~~~~~~~~l~~~-~l~l~ 205 (313)
T d1ogqa_ 128 VTLDFSYNALSGTLPPSISSLPNLVGITFD-GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLA-FVDLS 205 (313)
T ss_dssp CEEECCSSEEESCCCGGGGGCTTCCEEECC-SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCS-EEECC
T ss_pred cccccccccccccCchhhccCcccceeecc-ccccccccccccccccccccccccccccccccccccccccccc-ccccc
Confidence 999998 75566778889999999999998 887 44677777777765 666666655 4455566655433 56666
Q ss_pred ecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEecccc
Q 037494 296 GDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLKRNSY 374 (394)
Q Consensus 296 ~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~~n~~ 374 (394)
.+. .....|..+..+++|+.+++.+ .++... + .+.. +++|+.|+|++|+++...++.++++++|++|+|++|.+
T Consensus 206 ~~~--~~~~~~~~~~~~~~l~~l~~~~-~~l~~~-~~~~~~-~~~L~~L~Ls~N~l~g~iP~~l~~L~~L~~L~Ls~N~l 280 (313)
T d1ogqa_ 206 RNM--LEGDASVLFGSDKNTQKIHLAK-NSLAFD-LGKVGL-SKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280 (313)
T ss_dssp SSE--EEECCGGGCCTTSCCSEEECCS-SEECCB-GGGCCC-CTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEE
T ss_pred ccc--cccccccccccccccccccccc-cccccc-cccccc-ccccccccCccCeecccCChHHhCCCCCCEEECcCCcc
Confidence 665 5566777777888888888877 444433 4 6666 78888888888888766677788888888888888887
Q ss_pred cCce
Q 037494 375 FGRK 378 (394)
Q Consensus 375 ~~~~ 378 (394)
+|..
T Consensus 281 ~g~i 284 (313)
T d1ogqa_ 281 CGEI 284 (313)
T ss_dssp EEEC
T ss_pred cccC
Confidence 7643
No 2
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.80 E-value=7.6e-19 Score=155.91 Aligned_cols=186 Identities=20% Similarity=0.129 Sum_probs=81.9
Q ss_pred EEcCCCCCCCCcccccCcccccEEecCCCCCccccc-cccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCC
Q 037494 177 LNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPL-LICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLP 254 (394)
Q Consensus 177 L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~-~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~ 254 (394)
.+.++++++.+|+.+. +++++|+|++|.++.+|. .+.++++|++|+++ | .+..+|. ++.+++|++|+++ +|.+
T Consensus 15 v~C~~~~L~~iP~~lp--~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N-~l~~l~~-~~~l~~L~~L~Ls-~N~l 89 (266)
T d1p9ag_ 15 VNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA-ELTKLQV-DGTLPVLGTLDLS-HNQL 89 (266)
T ss_dssp EECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTS-CCCEEEC-CSCCTTCCEEECC-SSCC
T ss_pred EEccCCCCCeeCcCcC--cCCCEEECcCCcCCCcCHHHhhccccccccccccc-ccccccc-ccccccccccccc-cccc
Confidence 3444444444444332 244445555554444442 24444455555554 4 4444442 2344445555554 4444
Q ss_pred CCCCCCCCCCCcCceeCccccC--CCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-
Q 037494 255 APPKNYSSSLKNLIFISALHPS--SCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL- 331 (394)
Q Consensus 255 ~~~p~~l~~l~~L~~L~~~~~~--~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p- 331 (394)
...+..+..+++|+.|++..+. ......+..+.+++.|.+.++. ....-+..+..+++|+.+++++ +++..+.|
T Consensus 90 ~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~l~~l~~L~l~~n~--l~~l~~~~~~~l~~l~~l~l~~-N~l~~~~~~ 166 (266)
T d1p9ag_ 90 QSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNE--LKTLPPGLLTPTPKLEKLSLAN-NNLTELPAG 166 (266)
T ss_dssp SSCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSC--CCCCCTTTTTTCTTCCEEECTT-SCCSCCCTT
T ss_pred cccccccccccccccccccccccceeeccccccccccccccccccc--cceeccccccccccchhccccc-ccccccCcc
Confidence 4444444444445554444443 2222333444444555554443 2111122333444555555544 34444412
Q ss_pred CCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEecc
Q 037494 332 SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLKRN 372 (394)
Q Consensus 332 ~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~~n 372 (394)
.+.. +++|++|+|++|+++. .++.+..+++|+.|+|++|
T Consensus 167 ~~~~-l~~L~~L~Ls~N~L~~-lp~~~~~~~~L~~L~L~~N 205 (266)
T d1p9ag_ 167 LLNG-LENLDTLLLQENSLYT-IPKGFFGSHLLPFAFLHGN 205 (266)
T ss_dssp TTTT-CTTCCEEECCSSCCCC-CCTTTTTTCCCSEEECCSC
T ss_pred cccc-ccccceeecccCCCcc-cChhHCCCCCCCEEEecCC
Confidence 3444 4555555555555432 2223334455555555444
No 3
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.78 E-value=1.6e-18 Score=161.60 Aligned_cols=252 Identities=17% Similarity=0.128 Sum_probs=159.3
Q ss_pred CceEEEEEEeCCcchhhccCCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEe
Q 037494 122 ATVKRCFILEDLIEFISLEQSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQ 201 (394)
Q Consensus 122 ~~~r~L~l~~~~~~~~~~~~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~ 201 (394)
.+++.|.+.......+.....+++|++|.+.++... .++.+ +++++|++|++++|.+..+++ ++.+++|+.|+
T Consensus 44 ~~l~~L~l~~~~I~~l~gl~~L~nL~~L~Ls~N~l~-----~l~~l-~~L~~L~~L~L~~n~i~~i~~-l~~l~~L~~L~ 116 (384)
T d2omza2 44 DQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLT-----DITPL-KNLTKLVDILMNNNQIADITP-LANLTNLTGLT 116 (384)
T ss_dssp TTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCC-----CCGGG-TTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred CCCCEEECCCCCCCCccccccCCCCCEEeCcCCcCC-----CCccc-cCCcccccccccccccccccc-ccccccccccc
Confidence 456667776555555544456777777777777665 34444 777777777777777776654 67777777777
Q ss_pred cCCCCCcccc----------------------------------------------------------------ccccCC
Q 037494 202 LNIPTLKCLP----------------------------------------------------------------LLICTL 217 (394)
Q Consensus 202 l~~~~l~~lp----------------------------------------------------------------~~l~~l 217 (394)
++++.+..++ .....+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 196 (384)
T d2omza2 117 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKL 196 (384)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGC
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccc
Confidence 7665443211 112334
Q ss_pred CCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEee
Q 037494 218 LNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISG 296 (394)
Q Consensus 218 ~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~ 296 (394)
++++.++++ + .+..+++ .+..++|+.|+++ +|.+..++ .+..+++|+.|.+..+.......++.+++|+.|++++
T Consensus 197 ~~~~~l~l~~n-~i~~~~~-~~~~~~L~~L~l~-~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~~L~~L~l~~ 272 (384)
T d2omza2 197 TNLESLIATNN-QISDITP-LGILTNLDELSLN-GNQLKDIG-TLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGA 272 (384)
T ss_dssp TTCSEEECCSS-CCCCCGG-GGGCTTCCEEECC-SSCCCCCG-GGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCS
T ss_pred cccceeeccCC-ccCCCCc-ccccCCCCEEECC-CCCCCCcc-hhhcccccchhccccCccCCCCcccccccCCEeeccC
Confidence 556666666 5 5555543 3455666666666 66555443 4556666666666665522333455566666666655
Q ss_pred cCCc-------------------cccchhhhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEecccCCCCCccc
Q 037494 297 DLSH-------------------YHSGVSKSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSNTELMEDPMPM 357 (394)
Q Consensus 297 ~~~~-------------------~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~~~l~~~~~~~ 357 (394)
+.-. .... ...+..+++++.|++++ +++..+ +.+.. +++|++|++++|+++. ++.
T Consensus 273 ~~l~~~~~~~~~~~l~~l~~~~n~l~~-~~~~~~~~~l~~L~ls~-n~l~~l-~~l~~-l~~L~~L~L~~n~l~~--l~~ 346 (384)
T d2omza2 273 NQISNISPLAGLTALTNLELNENQLED-ISPISNLKNLTYLTLYF-NNISDI-SPVSS-LTKLQRLFFANNKVSD--VSS 346 (384)
T ss_dssp SCCCCCGGGTTCTTCSEEECCSSCCSC-CGGGGGCTTCSEEECCS-SCCSCC-GGGGG-CTTCCEEECCSSCCCC--CGG
T ss_pred cccCCCCcccccccccccccccccccc-ccccchhcccCeEECCC-CCCCCC-ccccc-CCCCCEEECCCCCCCC--Chh
Confidence 5400 1111 22355667777888776 566665 44566 8999999999999854 557
Q ss_pred ccCCCCCCeEEEecccccCceeEEeCCCCCcCCcccC
Q 037494 358 LERLPRLQVMKLKRNSYFGRKLACVGSGGFPELQVLT 394 (394)
Q Consensus 358 l~~l~~L~~L~l~~n~~~~~~~~~~~~~~fp~L~~L~ 394 (394)
++++++|++|++++|.+++... ...+++|+.|+
T Consensus 347 l~~l~~L~~L~l~~N~l~~l~~----l~~l~~L~~L~ 379 (384)
T d2omza2 347 LANLTNINWLSAGHNQISDLTP----LANLTRITQLG 379 (384)
T ss_dssp GGGCTTCCEEECCSSCCCBCGG----GTTCTTCSEEE
T ss_pred HcCCCCCCEEECCCCcCCCChh----hccCCCCCEee
Confidence 8999999999999998876541 35688888763
No 4
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP {Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Probab=99.76 E-value=2.8e-19 Score=162.64 Aligned_cols=241 Identities=15% Similarity=0.087 Sum_probs=189.5
Q ss_pred CCceEEEEEEeCCcc---hhhcc-CCCCCccEEEEec-CCCccchhcchhHHhccCCceeEEEcCCCCCCCC-cccccCc
Q 037494 121 LATVKRCFILEDLIE---FISLE-QSDMYLQSFLNHS-SESDHLALIDCENFCENFKYLRVLNWGSAVLDQF-PPGLENL 194 (394)
Q Consensus 121 ~~~~r~L~l~~~~~~---~~~~~-~~~~~lr~L~l~~-~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~l-p~~i~~l 194 (394)
..++..|.+.++... .+|.. ..+++|+.|.+.+ +...+ .+|+.+.++++|++|++++|.+..+ +..+..+
T Consensus 49 ~~~v~~L~L~~~~l~g~~~lp~~l~~L~~L~~L~Ls~~N~l~g----~iP~~i~~L~~L~~L~Ls~N~l~~~~~~~~~~~ 124 (313)
T d1ogqa_ 49 TYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG----PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES----CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC
T ss_pred cEEEEEEECCCCCCCCCCCCChHHhcCcccccccccccccccc----ccccccccccccchhhhccccccccccccccch
Confidence 346888999865444 34444 7899999999987 44432 4555559999999999999998854 5668899
Q ss_pred ccccEEecCCCCCc-cccccccCCCCCcEEEcc-cCCccccchhhccCccC-cEEEeeCCCCC-CCCCCCCCCCCcCcee
Q 037494 195 FLLKYLQLNIPTLK-CLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKL-MHLNFDSITLP-APPKNYSSSLKNLIFI 270 (394)
Q Consensus 195 ~~L~~L~l~~~~l~-~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L-~~L~l~~~~~~-~~~p~~l~~l~~L~~L 270 (394)
.+|+++++++|.+. .+|..++++++|++++++ |.....+|..++.+.++ +.+.++ ++.+ ...|..++.+..+ .+
T Consensus 125 ~~L~~l~l~~N~~~~~~p~~l~~l~~L~~l~l~~n~l~~~ip~~~~~l~~l~~~l~~~-~n~l~~~~~~~~~~l~~~-~l 202 (313)
T d1ogqa_ 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTIS-RNRLTGKIPPTFANLNLA-FV 202 (313)
T ss_dssp TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECC-SSEEEEECCGGGGGCCCS-EE
T ss_pred hhhcccccccccccccCchhhccCcccceeeccccccccccccccccccccccccccc-cccccccccccccccccc-cc
Confidence 99999999998655 688999999999999999 84445889989988887 788888 7773 3445556655443 56
Q ss_pred CccccC--CCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCC-ccCC-CCCCCCCCceEEEEe
Q 037494 271 SALHPS--SCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLS-RMVL-SEYQFPPSLIQLSLS 346 (394)
Q Consensus 271 ~~~~~~--~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~-~L~p-~~~~~l~~L~~L~L~ 346 (394)
.+..+. ...+..++.+++++.+.+.++. ... .+..++.+++|+.|++++ +++. .+ | +++. +++|++|+|+
T Consensus 203 ~l~~~~~~~~~~~~~~~~~~l~~l~~~~~~--l~~-~~~~~~~~~~L~~L~Ls~-N~l~g~i-P~~l~~-L~~L~~L~Ls 276 (313)
T d1ogqa_ 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNS--LAF-DLGKVGLSKNLNGLDLRN-NRIYGTL-PQGLTQ-LKFLHSLNVS 276 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSE--ECC-BGGGCCCCTTCCEEECCS-SCCEECC-CGGGGG-CTTCCEEECC
T ss_pred cccccccccccccccccccccccccccccc--ccc-cccccccccccccccCcc-CeecccC-ChHHhC-CCCCCEEECc
Confidence 665555 6677888999999999999885 333 345688899999999998 6676 67 9 9999 9999999999
Q ss_pred cccCCCCCcccccCCCCCCeEEEecccc
Q 037494 347 NTELMEDPMPMLERLPRLQVMKLKRNSY 374 (394)
Q Consensus 347 ~~~l~~~~~~~l~~l~~L~~L~l~~n~~ 374 (394)
+|++++. +|.++++++|+.+++++|.+
T Consensus 277 ~N~l~g~-iP~~~~L~~L~~l~l~~N~~ 303 (313)
T d1ogqa_ 277 FNNLCGE-IPQGGNLQRFDVSAYANNKC 303 (313)
T ss_dssp SSEEEEE-CCCSTTGGGSCGGGTCSSSE
T ss_pred CCccccc-CCCcccCCCCCHHHhCCCcc
Confidence 9998643 45678899999999988863
No 5
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.76 E-value=1e-17 Score=151.57 Aligned_cols=254 Identities=13% Similarity=0.020 Sum_probs=168.5
Q ss_pred CCceEEEEEEeCCcchhhcc--CCCCCccEEEEecCCCccchhcch-hHHhccCCceeEEEcCCCCCCCCcccccCcccc
Q 037494 121 LATVKRCFILEDLIEFISLE--QSDMYLQSFLNHSSESDHLALIDC-ENFCENFKYLRVLNWGSAVLDQFPPGLENLFLL 197 (394)
Q Consensus 121 ~~~~r~L~l~~~~~~~~~~~--~~~~~lr~L~l~~~~~~~~~~~~l-~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L 197 (394)
+..+++|.+..+....++.. ..+++|+.|.+.++... .+ +..|..++.|++|++++|.++.+|..+ ...+
T Consensus 30 ~~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~l~~n~~~-----~i~~~~f~~l~~L~~L~l~~n~l~~l~~~~--~~~l 102 (305)
T d1xkua_ 30 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS-----KISPGAFAPLVKLERLYLSKNQLKELPEKM--PKTL 102 (305)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC-----CBCTTTTTTCTTCCEEECCSSCCSBCCSSC--CTTC
T ss_pred CCCCCEEECcCCcCCCcChhHhhcccccccccccccccc-----ccchhhhhCCCccCEecccCCccCcCccch--hhhh
Confidence 34556666665555555432 45556666666655554 22 333356666666666666666555432 2355
Q ss_pred cEEecCCCCCcccccc-ccCCCCCcEEEcc-cCC--ccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCcc
Q 037494 198 KYLQLNIPTLKCLPLL-ICTLLNLETLEMP-AGY--IDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISAL 273 (394)
Q Consensus 198 ~~L~l~~~~l~~lp~~-l~~l~~L~~L~l~-~~~--l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~ 273 (394)
+.|.+..+.+..++.. +.....+..++.. +.. ....+..+..+++|+.+++. +|....+|..+ +++|+.|++.
T Consensus 103 ~~L~~~~n~l~~l~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~l~~L~~l~l~-~n~l~~l~~~~--~~~L~~L~l~ 179 (305)
T d1xkua_ 103 QELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIA-DTNITTIPQGL--PPSLTELHLD 179 (305)
T ss_dssp CEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECC-SSCCCSCCSSC--CTTCSEEECT
T ss_pred hhhhccccchhhhhhhhhhccccccccccccccccccCCCccccccccccCccccc-cCCccccCccc--CCccCEEECC
Confidence 5566666555555433 2344555566655 311 12223456678899999999 88877777643 6789999988
Q ss_pred ccC--CCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccC
Q 037494 274 HPS--SCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTEL 350 (394)
Q Consensus 274 ~~~--~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l 350 (394)
++. ...+..+..++.++.|.++++. .....+..+..+++|++|+|++ +++..+ | ++.. +++|+.|+|++|++
T Consensus 180 ~n~~~~~~~~~~~~~~~l~~L~~s~n~--l~~~~~~~~~~l~~L~~L~L~~-N~L~~l-p~~l~~-l~~L~~L~Ls~N~i 254 (305)
T d1xkua_ 180 GNKITKVDAASLKGLNNLAKLGLSFNS--ISAVDNGSLANTPHLRELHLNN-NKLVKV-PGGLAD-HKYIQVVYLHNNNI 254 (305)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSC--CCEECTTTGGGSTTCCEEECCS-SCCSSC-CTTTTT-CSSCCEEECCSSCC
T ss_pred CCcCCCCChhHhhcccccccccccccc--ccccccccccccccceeeeccc-cccccc-cccccc-ccCCCEEECCCCcc
Confidence 877 4455678889999999999886 4444466788899999999998 689999 8 8988 99999999999998
Q ss_pred CCCCccc------ccCCCCCCeEEEecccccCceeEEeCCCCCcCCcc
Q 037494 351 MEDPMPM------LERLPRLQVMKLKRNSYFGRKLACVGSGGFPELQV 392 (394)
Q Consensus 351 ~~~~~~~------l~~l~~L~~L~l~~n~~~~~~~~~~~~~~fp~L~~ 392 (394)
+..+... ...+++|+.|++++|.+....+ . ++.|+.++.
T Consensus 255 ~~i~~~~f~~~~~~~~~~~L~~L~L~~N~~~~~~~--~-~~~f~~~~~ 299 (305)
T d1xkua_ 255 SAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEI--Q-PSTFRCVYV 299 (305)
T ss_dssp CCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGS--C-GGGGTTCCC
T ss_pred CccChhhccCcchhcccCCCCEEECCCCcCccCcC--C-HhHhccccc
Confidence 7654322 3467889999999887654332 2 556776654
No 6
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of glycoprotein Ib alpha {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.75 E-value=9e-18 Score=148.85 Aligned_cols=174 Identities=18% Similarity=0.141 Sum_probs=141.6
Q ss_pred CceeEEEcCCCCCCCCc-ccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEee
Q 037494 172 KYLRVLNWGSAVLDQFP-PGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFD 249 (394)
Q Consensus 172 ~~L~~L~l~~~~~~~lp-~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~ 249 (394)
+++++|++++|.++.+| ..+.++++|++|++++|.++.+| ..+.+++|++|+++ | .+...|..+..+++|+.|+++
T Consensus 31 ~~l~~L~Ls~N~i~~l~~~~f~~l~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~Ls~N-~l~~~~~~~~~l~~L~~L~l~ 108 (266)
T d1p9ag_ 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ-VDGTLPVLGTLDLSHN-QLQSLPLLGQTLPALTVLDVS 108 (266)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE-CCSCCTTCCEEECCSS-CCSSCCCCTTTCTTCCEEECC
T ss_pred cCCCEEECcCCcCCCcCHHHhhccccccccccccccccccc-cccccccccccccccc-ccccccccccccccccccccc
Confidence 57889999999998876 56888999999999999998887 45788999999999 8 888888888889999999999
Q ss_pred CCCCCCCCCC-CCCCCCcCceeCccccC-C-CcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCC
Q 037494 250 SITLPAPPKN-YSSSLKNLIFISALHPS-S-CTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKL 326 (394)
Q Consensus 250 ~~~~~~~~p~-~l~~l~~L~~L~~~~~~-~-~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L 326 (394)
++....++. .+..+.+++.|.+..+. . ..+..+..+++++.+++++|. .....+..+..+++|+.|+|++ +++
T Consensus 109 -~~~~~~~~~~~~~~l~~l~~L~l~~n~l~~l~~~~~~~l~~l~~l~l~~N~--l~~~~~~~~~~l~~L~~L~Ls~-N~L 184 (266)
T d1p9ag_ 109 -FNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNN--LTELPAGLLNGLENLDTLLLQE-NSL 184 (266)
T ss_dssp -SSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC--CSCCCTTTTTTCTTCCEEECCS-SCC
T ss_pred -ccccceeeccccccccccccccccccccceeccccccccccchhccccccc--ccccCccccccccccceeeccc-CCC
Confidence 888666554 46778889999888877 3 333456778899999999986 4444456678899999999998 779
Q ss_pred CccCC-CCCCCCCCceEEEEecccCCCC
Q 037494 327 SRMVL-SEYQFPPSLIQLSLSNTELMED 353 (394)
Q Consensus 327 ~~L~p-~~~~~l~~L~~L~L~~~~l~~~ 353 (394)
+.+ | .+.. +++|+.|+|++|++.+.
T Consensus 185 ~~l-p~~~~~-~~~L~~L~L~~Np~~Cd 210 (266)
T d1p9ag_ 185 YTI-PKGFFG-SHLLPFAFLHGNPWLCN 210 (266)
T ss_dssp CCC-CTTTTT-TCCCSEEECCSCCBCCS
T ss_pred ccc-ChhHCC-CCCCCEEEecCCCCCCC
Confidence 999 8 7777 89999999999987653
No 7
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.74 E-value=1.8e-17 Score=148.40 Aligned_cols=199 Identities=18% Similarity=0.181 Sum_probs=158.2
Q ss_pred CceeEEEcCCCCCCCCc-ccccCcccccEEecCCCCCcccccc-ccCCCCCcEEEcc-cCCccccc-hhhccCccCcEEE
Q 037494 172 KYLRVLNWGSAVLDQFP-PGLENLFLLKYLQLNIPTLKCLPLL-ICTLLNLETLEMP-AGYIDHSP-EGIWMMQKLMHLN 247 (394)
Q Consensus 172 ~~L~~L~l~~~~~~~lp-~~i~~l~~L~~L~l~~~~l~~lp~~-l~~l~~L~~L~l~-~~~l~~lp-~~i~~l~~L~~L~ 247 (394)
+.+++|++++|.++.+| .++.++++|++|+++++.+..++.. ...+..++.++.. +..+..++ ..+.++++|++|+
T Consensus 32 ~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n~l~~i~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~l~~L~~L~ 111 (284)
T d1ozna_ 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (284)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECcCCcCCCCCHHHhhccccccccccccccccccccccccccccccccccccccccccccchhhcccccCCEEe
Confidence 46789999999998887 4688899999999999988876644 4567888888877 54777775 4678899999999
Q ss_pred eeCCCCCCCCCC-CCCCCCcCceeCccccC-CCc-chhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCC
Q 037494 248 FDSITLPAPPKN-YSSSLKNLIFISALHPS-SCT-PDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGS 324 (394)
Q Consensus 248 l~~~~~~~~~p~-~l~~l~~L~~L~~~~~~-~~~-~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~ 324 (394)
++ ++....++. .++..++|+.+.+..+. ... ...+..+++|+.|+++++. .....+..+..+++|+.+.+++ +
T Consensus 112 l~-~n~~~~~~~~~~~~~~~L~~l~l~~N~l~~i~~~~f~~~~~L~~L~l~~N~--l~~l~~~~f~~l~~L~~l~l~~-N 187 (284)
T d1ozna_ 112 LD-RCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR--ISSVPERAFRGLHSLDRLLLHQ-N 187 (284)
T ss_dssp CT-TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC--CCEECTTTTTTCTTCCEEECCS-S
T ss_pred cC-CcccccccccccchhcccchhhhccccccccChhHhccccchhhcccccCc--ccccchhhhccccccchhhhhh-c
Confidence 99 888665544 46778889999888877 333 3557788899999999886 4444456778889999999987 6
Q ss_pred CCCccCC-CCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEeccccc
Q 037494 325 KLSRMVL-SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLKRNSYF 375 (394)
Q Consensus 325 ~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~ 375 (394)
++..+.| ++.. +++|+.|++++|++...+...++.+++|++|++++|.+.
T Consensus 188 ~l~~i~~~~f~~-l~~L~~L~l~~N~i~~~~~~~~~~~~~L~~L~l~~N~l~ 238 (284)
T d1ozna_ 188 RVAHVHPHAFRD-LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWV 238 (284)
T ss_dssp CCCEECTTTTTT-CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEE
T ss_pred cccccChhHhhh-hhhcccccccccccccccccccccccccCEEEecCCCCC
Confidence 6777646 8888 899999999999988877778899999999999887654
No 8
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes [TaxId: 1639]}
Probab=99.74 E-value=2.5e-17 Score=153.43 Aligned_cols=165 Identities=21% Similarity=0.208 Sum_probs=105.1
Q ss_pred ccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCcc
Q 037494 195 FLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISAL 273 (394)
Q Consensus 195 ~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~ 273 (394)
.+|+.|++++|.++.+| .+..+++|+.|+++ | .+..++. ++.+++|++|+++ ++....+++ +..++.++.+...
T Consensus 219 ~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n-~l~~~~~-~~~~~~L~~L~l~-~~~l~~~~~-~~~~~~l~~l~~~ 293 (384)
T d2omza2 219 TNLDELSLNGNQLKDIG-TLASLTNLTDLDLANN-QISNLAP-LSGLTKLTELKLG-ANQISNISP-LAGLTALTNLELN 293 (384)
T ss_dssp TTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSS-CCCCCGG-GTTCTTCSEEECC-SSCCCCCGG-GTTCTTCSEEECC
T ss_pred CCCCEEECCCCCCCCcc-hhhcccccchhccccC-ccCCCCc-ccccccCCEeecc-CcccCCCCc-ccccccccccccc
Confidence 34444444444444443 34445555555555 4 4444432 4445555555555 444433332 3444455555554
Q ss_pred ccCCCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEecccCCCC
Q 037494 274 HPSSCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSNTELMED 353 (394)
Q Consensus 274 ~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~~~l~~~ 353 (394)
.+....+..+..+++++.|+++++. . ..++ .+..+++|++|++++ ++++.+ |.+.. +++|++|++++|+++.
T Consensus 294 ~n~l~~~~~~~~~~~l~~L~ls~n~--l-~~l~-~l~~l~~L~~L~L~~-n~l~~l-~~l~~-l~~L~~L~l~~N~l~~- 365 (384)
T d2omza2 294 ENQLEDISPISNLKNLTYLTLYFNN--I-SDIS-PVSSLTKLQRLFFAN-NKVSDV-SSLAN-LTNINWLSAGHNQISD- 365 (384)
T ss_dssp SSCCSCCGGGGGCTTCSEEECCSSC--C-SCCG-GGGGCTTCCEEECCS-SCCCCC-GGGGG-CTTCCEEECCSSCCCB-
T ss_pred ccccccccccchhcccCeEECCCCC--C-CCCc-ccccCCCCCEEECCC-CCCCCC-hhHcC-CCCCCEEECCCCcCCC-
Confidence 4443334556777888999998885 3 3333 378899999999998 578777 66777 9999999999999854
Q ss_pred CcccccCCCCCCeEEEeccc
Q 037494 354 PMPMLERLPRLQVMKLKRNS 373 (394)
Q Consensus 354 ~~~~l~~l~~L~~L~l~~n~ 373 (394)
++.++++++|+.|+|++|.
T Consensus 366 -l~~l~~l~~L~~L~L~~Na 384 (384)
T d2omza2 366 -LTPLANLTRITQLGLNDQA 384 (384)
T ss_dssp -CGGGTTCTTCSEEECCCEE
T ss_pred -ChhhccCCCCCEeeCCCCc
Confidence 4458999999999998763
No 9
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.72 E-value=3.6e-17 Score=141.38 Aligned_cols=187 Identities=20% Similarity=0.215 Sum_probs=140.7
Q ss_pred ccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEE
Q 037494 169 ENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLN 247 (394)
Q Consensus 169 ~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~ 247 (394)
..+.+|+.|++.+|.+++++ .+.++++|++|++++|.+..++ .+..+++|++++++ | .+..++ ++..+++|+.+.
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~ls~n~i~~~~-~l~~l~~l~~l~~~~n-~~~~i~-~l~~l~~L~~l~ 113 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLA-PLKNLTKITELELSGN-PLKNVS-AIAGLQSIKTLD 113 (227)
T ss_dssp HHHHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCG-GGTTCCSCCEEECCSC-CCSCCG-GGTTCTTCCEEE
T ss_pred HHcCCcCEEECCCCCCCcch-hHhcCCCCcEeecCCceeeccc-cccccccccccccccc-cccccc-cccccccccccc
Confidence 55677888888888888874 5888888888888888888776 47888888888888 7 777765 477888888888
Q ss_pred eeCCCCCCCCCCCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCC
Q 037494 248 FDSITLPAPPKNYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLS 327 (394)
Q Consensus 248 l~~~~~~~~~p~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~ 327 (394)
++ ++.....+ .+...+.++.+.+..+.......+..+++|+.|.+.++. .. .. ..+..+++|+.|++++ +.++
T Consensus 114 l~-~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~--~~-~~-~~l~~l~~L~~L~Ls~-n~l~ 186 (227)
T d1h6ua2 114 LT-STQITDVT-PLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQ--VS-DL-TPLANLSKLTTLKADD-NKIS 186 (227)
T ss_dssp CT-TSCCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSC--CC-CC-GGGTTCTTCCEEECCS-SCCC
T ss_pred cc-cccccccc-hhccccchhhhhchhhhhchhhhhccccccccccccccc--cc-cc-hhhcccccceecccCC-CccC
Confidence 88 77644432 345666777777766664444556777888888888875 22 22 2367888999999988 4677
Q ss_pred ccCCCCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEe
Q 037494 328 RMVLSEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLK 370 (394)
Q Consensus 328 ~L~p~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~ 370 (394)
.+ |.+.. +++|++|+|++|+++. ++.++++++|+.|+++
T Consensus 187 ~l-~~l~~-l~~L~~L~Ls~N~lt~--i~~l~~l~~L~~L~ls 225 (227)
T d1h6ua2 187 DI-SPLAS-LPNLIEVHLKNNQISD--VSPLANTSNLFIVTLT 225 (227)
T ss_dssp CC-GGGGG-CTTCCEEECTTSCCCB--CGGGTTCTTCCEEEEE
T ss_pred CC-hhhcC-CCCCCEEECcCCcCCC--CcccccCCCCCEEEee
Confidence 76 55666 8899999999998753 4568889999999985
No 10
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Probab=99.71 E-value=1e-16 Score=144.88 Aligned_cols=227 Identities=19% Similarity=0.183 Sum_probs=177.9
Q ss_pred cchhhccCCCCCccEEEEecCCCccchhcch-hHHhccCCceeEEEcCCCCCCCC-cccccCcccccEEecCCCCCcccc
Q 037494 134 IEFISLEQSDMYLQSFLNHSSESDHLALIDC-ENFCENFKYLRVLNWGSAVLDQF-PPGLENLFLLKYLQLNIPTLKCLP 211 (394)
Q Consensus 134 ~~~~~~~~~~~~lr~L~l~~~~~~~~~~~~l-~~~~~~l~~L~~L~l~~~~~~~l-p~~i~~l~~L~~L~l~~~~l~~lp 211 (394)
...+|... .+.++.|.+.++.+. .+ +..|.++++|++|+++++.+..+ |..+.++++|++|++++|.++.+|
T Consensus 22 L~~lP~~l-~~~l~~L~Ls~N~i~-----~l~~~~f~~l~~L~~L~l~~n~~~~i~~~~f~~l~~L~~L~l~~n~l~~l~ 95 (305)
T d1xkua_ 22 LEKVPKDL-PPDTALLDLQNNKIT-----EIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELP 95 (305)
T ss_dssp CCSCCCSC-CTTCCEEECCSSCCC-----CBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSBCC
T ss_pred CCccCCCC-CCCCCEEECcCCcCC-----CcChhHhhccccccccccccccccccchhhhhCCCccCEecccCCccCcCc
Confidence 34455432 368999999999876 44 33348999999999999999877 567999999999999999999998
Q ss_pred ccccCCCCCcEEEcc-cCCccccchh-hccCccCcEEEeeCCCCC---CCCCCCCCCCCcCceeCccccC-CCcchhcCC
Q 037494 212 LLICTLLNLETLEMP-AGYIDHSPEG-IWMMQKLMHLNFDSITLP---APPKNYSSSLKNLIFISALHPS-SCTPDILSR 285 (394)
Q Consensus 212 ~~l~~l~~L~~L~l~-~~~l~~lp~~-i~~l~~L~~L~l~~~~~~---~~~p~~l~~l~~L~~L~~~~~~-~~~~~~l~~ 285 (394)
..+ ...++.|++. + .+..++.. +.....+..+... .+.. ...+..+..+++|+.+.+.++. ...+.. .
T Consensus 96 ~~~--~~~l~~L~~~~n-~l~~l~~~~~~~~~~~~~l~~~-~n~~~~~~~~~~~~~~l~~L~~l~l~~n~l~~l~~~--~ 169 (305)
T d1xkua_ 96 EKM--PKTLQELRVHEN-EITKVRKSVFNGLNQMIVVELG-TNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQG--L 169 (305)
T ss_dssp SSC--CTTCCEEECCSS-CCCBBCHHHHTTCTTCCEEECC-SSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSS--C
T ss_pred cch--hhhhhhhhcccc-chhhhhhhhhhccccccccccc-cccccccCCCccccccccccCccccccCCccccCcc--c
Confidence 764 4588999999 7 77777753 5567778888887 6542 2233456778889999888877 433333 3
Q ss_pred CCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccCCCCCcccccCCCCC
Q 037494 286 LPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRL 364 (394)
Q Consensus 286 l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L 364 (394)
+++|+.|++.++. .....+..+..++.++.|++++ ..+..+.| ++.. +++|++|+|++|+++.. ++.+..+++|
T Consensus 170 ~~~L~~L~l~~n~--~~~~~~~~~~~~~~l~~L~~s~-n~l~~~~~~~~~~-l~~L~~L~L~~N~L~~l-p~~l~~l~~L 244 (305)
T d1xkua_ 170 PPSLTELHLDGNK--ITKVDAASLKGLNNLAKLGLSF-NSISAVDNGSLAN-TPHLRELHLNNNKLVKV-PGGLADHKYI 244 (305)
T ss_dssp CTTCSEEECTTSC--CCEECTGGGTTCTTCCEEECCS-SCCCEECTTTGGG-STTCCEEECCSSCCSSC-CTTTTTCSSC
T ss_pred CCccCEEECCCCc--CCCCChhHhhcccccccccccc-ccccccccccccc-cccceeeeccccccccc-ccccccccCC
Confidence 6789999999987 5666677888999999999998 67888844 8888 99999999999998654 4578899999
Q ss_pred CeEEEecccccCc
Q 037494 365 QVMKLKRNSYFGR 377 (394)
Q Consensus 365 ~~L~l~~n~~~~~ 377 (394)
++|+|++|+++..
T Consensus 245 ~~L~Ls~N~i~~i 257 (305)
T d1xkua_ 245 QVVYLHNNNISAI 257 (305)
T ss_dssp CEEECCSSCCCCC
T ss_pred CEEECCCCccCcc
Confidence 9999999987653
No 11
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr) {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.70 E-value=9e-17 Score=143.70 Aligned_cols=209 Identities=16% Similarity=0.103 Sum_probs=165.4
Q ss_pred EEEcCCCCCCCCcccccCcccccEEecCCCCCccccc-cccCCCCCcEEEcc-cCCccccch-hhccCccCcEEEeeCCC
Q 037494 176 VLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPL-LICTLLNLETLEMP-AGYIDHSPE-GIWMMQKLMHLNFDSIT 252 (394)
Q Consensus 176 ~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~-~l~~l~~L~~L~l~-~~~l~~lp~-~i~~l~~L~~L~l~~~~ 252 (394)
++..++.+++.+|..+. ..+++|+|++|.++.+|+ .+.++++|++|+++ + .+..++. .+..+..++.+.....+
T Consensus 15 ~v~c~~~~L~~iP~~ip--~~~~~L~Ls~N~i~~i~~~~f~~l~~L~~L~ls~n-~l~~i~~~~~~~~~~~~~l~~~~~~ 91 (284)
T d1ozna_ 15 TTSCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSN-VLARIDAAAFTGLALLEQLDLSDNA 91 (284)
T ss_dssp EEECCSSCCSSCCTTCC--TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSS-CCCEECTTTTTTCTTCCEEECCSCT
T ss_pred EEEcCCCCCCccCCCCC--CCCCEEECcCCcCCCCCHHHhhccccccccccccc-ccccccccccccccccccccccccc
Confidence 34677778888887665 578999999999999985 58899999999999 8 7877765 45668889998876133
Q ss_pred CCCCC-CCCCCCCCcCceeCccccC--CCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCcc
Q 037494 253 LPAPP-KNYSSSLKNLIFISALHPS--SCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRM 329 (394)
Q Consensus 253 ~~~~~-p~~l~~l~~L~~L~~~~~~--~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L 329 (394)
....+ |..++++++|++|.+..+. ......+...++|+.+++.++. .....+..+..+++|+.|++++ ++++.+
T Consensus 92 ~~~~l~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~l~l~~N~--l~~i~~~~f~~~~~L~~L~l~~-N~l~~l 168 (284)
T d1ozna_ 92 QLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNA--LQALPDDTFRDLGNLTHLFLHG-NRISSV 168 (284)
T ss_dssp TCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSC--CCCCCTTTTTTCTTCCEEECCS-SCCCEE
T ss_pred ccccccchhhcccccCCEEecCCcccccccccccchhcccchhhhcccc--ccccChhHhccccchhhccccc-Cccccc
Confidence 36666 4558999999999999888 3345567788999999999985 3333346678889999999998 688888
Q ss_pred CC-CCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEecccccCceeEEeCCCCCcCCccc
Q 037494 330 VL-SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLKRNSYFGRKLACVGSGGFPELQVL 393 (394)
Q Consensus 330 ~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~fp~L~~L 393 (394)
.| ++.. +++|+.+++++|++....+..+.++++|++|++++|.+.+..... .+.+++|+.|
T Consensus 169 ~~~~f~~-l~~L~~l~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~i~~~~~~~--~~~~~~L~~L 230 (284)
T d1ozna_ 169 PERAFRG-LHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEA--LAPLRALQYL 230 (284)
T ss_dssp CTTTTTT-CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHH--HTTCTTCCEE
T ss_pred chhhhcc-ccccchhhhhhccccccChhHhhhhhhcccccccccccccccccc--cccccccCEE
Confidence 44 7888 999999999999998777788999999999999999887654221 2356666655
No 12
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.67 E-value=4.2e-16 Score=131.71 Aligned_cols=161 Identities=19% Similarity=0.243 Sum_probs=98.1
Q ss_pred CcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeC
Q 037494 193 NLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFIS 271 (394)
Q Consensus 193 ~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~ 271 (394)
.+.++++|+++++.++.++ ++..+++|++|+++ | .+..+++ ++++++|++|+++ +|....++ .++.+++|+.|.
T Consensus 38 ~l~~l~~L~l~~~~i~~l~-~l~~l~nL~~L~Ls~N-~l~~~~~-l~~l~~L~~L~l~-~n~~~~~~-~l~~l~~L~~L~ 112 (199)
T d2omxa2 38 DLDQVTTLQADRLGIKSID-GVEYLNNLTQINFSNN-QLTDITP-LKNLTKLVDILMN-NNQIADIT-PLANLTNLTGLT 112 (199)
T ss_dssp HHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECC-SSCCCCCG-GGTTCTTCSEEE
T ss_pred HhcCCCEEECCCCCCCCcc-ccccCCCcCcCccccc-cccCccc-ccCCccccccccc-cccccccc-cccccccccccc
Confidence 4556666666666666553 45566666666666 5 5555543 6666666666666 65554443 355666666666
Q ss_pred ccccCCCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEecccCC
Q 037494 272 ALHPSSCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSNTELM 351 (394)
Q Consensus 272 ~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~~~l~ 351 (394)
+.++.......+..+++|+.|++++|. ...++ .+..+++|+.|++.+ +++..+ +.++. +++|+.|++++|+++
T Consensus 113 l~~~~~~~~~~~~~l~~L~~L~l~~n~---l~~~~-~l~~~~~L~~L~l~~-n~l~~l-~~l~~-l~~L~~L~ls~N~i~ 185 (199)
T d2omxa2 113 LFNNQITDIDPLKNLTNLNRLELSSNT---ISDIS-ALSGLTSLQQLNFSS-NQVTDL-KPLAN-LTTLERLDISSNKVS 185 (199)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEECCSSC---CCCCG-GGTTCTTCSEEECCS-SCCCCC-GGGTT-CTTCCEEECCSSCCC
T ss_pred ccccccccccccchhhhhHHhhhhhhh---hcccc-ccccccccccccccc-ccccCC-ccccC-CCCCCEEECCCCCCC
Confidence 655553334456667777777777664 22222 355666777777766 455555 44455 777888888888764
Q ss_pred CCCcccccCCCCCCeE
Q 037494 352 EDPMPMLERLPRLQVM 367 (394)
Q Consensus 352 ~~~~~~l~~l~~L~~L 367 (394)
. ++.++++++|+.|
T Consensus 186 ~--i~~l~~L~~L~~L 199 (199)
T d2omxa2 186 D--ISVLAKLTNLESL 199 (199)
T ss_dssp C--CGGGGGCTTCSEE
T ss_pred C--CccccCCCCCCcC
Confidence 3 4556777777765
No 13
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=3.7e-16 Score=133.16 Aligned_cols=164 Identities=21% Similarity=0.209 Sum_probs=95.7
Q ss_pred cccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCc
Q 037494 194 LFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISA 272 (394)
Q Consensus 194 l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~ 272 (394)
+..|++|+++++.++.++ ++..+++|++|+++ | .+..+++ ++.+++|++|+++ +|.+..+| .++.+++|+.|.+
T Consensus 45 L~~L~~L~l~~~~i~~l~-~l~~l~~L~~L~L~~n-~i~~l~~-~~~l~~L~~L~l~-~n~i~~l~-~l~~l~~L~~L~l 119 (210)
T d1h6ta2 45 LNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGN-KLTDIKP-LANLKNLGWLFLD-ENKVKDLS-SLKDLKKLKSLSL 119 (210)
T ss_dssp HHTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSS-CCCCCGG-GTTCTTCCEEECC-SSCCCCGG-GGTTCTTCCEEEC
T ss_pred hcCccEEECcCCCCCCch-hHhhCCCCCEEeCCCc-cccCccc-cccCccccccccc-cccccccc-ccccccccccccc
Confidence 344455555555544443 34445555555555 4 4444442 4445555555555 54444443 3444555555555
Q ss_pred cccCCCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEecccCCC
Q 037494 273 LHPSSCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSNTELME 352 (394)
Q Consensus 273 ~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~~~l~~ 352 (394)
.++....+..+..+++++.+.++++. ... +..+..+++|+.+++++ +++..+ +.+.. +++|+.|++++|+++
T Consensus 120 ~~~~~~~~~~l~~l~~l~~l~~~~n~--l~~--~~~~~~l~~L~~l~l~~-n~l~~i-~~l~~-l~~L~~L~Ls~N~i~- 191 (210)
T d1h6ta2 120 EHNGISDINGLVHLPQLESLYLGNNK--ITD--ITVLSRLTKLDTLSLED-NQISDI-VPLAG-LTKLQNLYLSKNHIS- 191 (210)
T ss_dssp TTSCCCCCGGGGGCTTCCEEECCSSC--CCC--CGGGGGCTTCSEEECCS-SCCCCC-GGGTT-CTTCCEEECCSSCCC-
T ss_pred cccccccccccccccccccccccccc--ccc--ccccccccccccccccc-cccccc-ccccC-CCCCCEEECCCCCCC-
Confidence 54443333445666667777776664 221 22345677788888877 456655 44556 889999999999874
Q ss_pred CCcccccCCCCCCeEEEec
Q 037494 353 DPMPMLERLPRLQVMKLKR 371 (394)
Q Consensus 353 ~~~~~l~~l~~L~~L~l~~ 371 (394)
.++.+.++++|++|+|++
T Consensus 192 -~l~~l~~l~~L~~L~Ls~ 209 (210)
T d1h6ta2 192 -DLRALAGLKNLDVLELFS 209 (210)
T ss_dssp -BCGGGTTCTTCSEEEEEE
T ss_pred -CChhhcCCCCCCEEEccC
Confidence 356788999999999853
No 14
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.66 E-value=3e-16 Score=133.78 Aligned_cols=163 Identities=19% Similarity=0.137 Sum_probs=84.3
Q ss_pred CceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeC
Q 037494 172 KYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDS 250 (394)
Q Consensus 172 ~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~ 250 (394)
..|+.|+++++.+..++. +..+++|++|++++|.++.++ .++.+++|++|+++ | .+..+| .+..+++|+.|+++
T Consensus 46 ~~L~~L~l~~~~i~~l~~-l~~l~~L~~L~L~~n~i~~l~-~~~~l~~L~~L~l~~n-~i~~l~-~l~~l~~L~~L~l~- 120 (210)
T d1h6ta2 46 NSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIK-PLANLKNLGWLFLDEN-KVKDLS-SLKDLKKLKSLSLE- 120 (210)
T ss_dssp HTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSS-CCCCGG-GGTTCTTCCEEECT-
T ss_pred cCccEEECcCCCCCCchh-HhhCCCCCEEeCCCccccCcc-ccccCccccccccccc-cccccc-cccccccccccccc-
Confidence 445555555555554432 455555555555555555554 34555555555555 5 555554 35555555555555
Q ss_pred CCCCCCCCCCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccC
Q 037494 251 ITLPAPPKNYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMV 330 (394)
Q Consensus 251 ~~~~~~~p~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~ 330 (394)
+|....++ .+..+++++.+.+..+....+..+..+++|+.++++++. . ..++ .+..+++|+.|++++ +.++.+
T Consensus 121 ~~~~~~~~-~l~~l~~l~~l~~~~n~l~~~~~~~~l~~L~~l~l~~n~--l-~~i~-~l~~l~~L~~L~Ls~-N~i~~l- 193 (210)
T d1h6ta2 121 HNGISDIN-GLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQ--I-SDIV-PLAGLTKLQNLYLSK-NHISDL- 193 (210)
T ss_dssp TSCCCCCG-GGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSC--C-CCCG-GGTTCTTCCEEECCS-SCCCBC-
T ss_pred cccccccc-ccccccccccccccccccccccccccccccccccccccc--c-cccc-cccCCCCCCEEECCC-CCCCCC-
Confidence 55433332 344455555555544442233344555566666666553 2 1222 255566666666665 345555
Q ss_pred CCCCCCCCCceEEEEec
Q 037494 331 LSEYQFPPSLIQLSLSN 347 (394)
Q Consensus 331 p~~~~~l~~L~~L~L~~ 347 (394)
|.+.. +++|++|+|++
T Consensus 194 ~~l~~-l~~L~~L~Ls~ 209 (210)
T d1h6ta2 194 RALAG-LKNLDVLELFS 209 (210)
T ss_dssp GGGTT-CTTCSEEEEEE
T ss_pred hhhcC-CCCCCEEEccC
Confidence 44445 66666666653
No 15
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=2.8e-15 Score=129.22 Aligned_cols=188 Identities=20% Similarity=0.233 Sum_probs=152.6
Q ss_pred CCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCC
Q 037494 141 QSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNL 220 (394)
Q Consensus 141 ~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L 220 (394)
.++.+|+.|.+.++... .++.+ ..+++|++|++++|.+..+++ +..+.+|+++++++|.++.++ .++.+++|
T Consensus 38 ~~l~~L~~L~l~~~~i~-----~l~~l-~~l~~L~~L~ls~n~i~~~~~-l~~l~~l~~l~~~~n~~~~i~-~l~~l~~L 109 (227)
T d1h6ua2 38 ADLDGITTLSAFGTGVT-----TIEGV-QYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS-AIAGLQSI 109 (227)
T ss_dssp HHHHTCCEEECTTSCCC-----CCTTG-GGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTC
T ss_pred HHcCCcCEEECCCCCCC-----cchhH-hcCCCCcEeecCCceeecccc-ccccccccccccccccccccc-cccccccc
Confidence 45678999999988776 45556 899999999999999987764 899999999999999998886 68899999
Q ss_pred cEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEeecCC
Q 037494 221 ETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISGDLS 299 (394)
Q Consensus 221 ~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 299 (394)
++++++ + ....++ .+...+.++.+.++ ++.....+ .+...++|+.|.+..+.......++.+++|+.|++++|.
T Consensus 110 ~~l~l~~~-~~~~~~-~~~~~~~~~~l~~~-~~~~~~~~-~~~~~~~L~~L~l~~n~~~~~~~l~~l~~L~~L~Ls~n~- 184 (227)
T d1h6ua2 110 KTLDLTST-QITDVT-PLAGLSNLQVLYLD-LNQITNIS-PLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNK- 184 (227)
T ss_dssp CEEECTTS-CCCCCG-GGTTCTTCCEEECC-SSCCCCCG-GGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSC-
T ss_pred cccccccc-cccccc-hhccccchhhhhch-hhhhchhh-hhccccccccccccccccccchhhcccccceecccCCCc-
Confidence 999999 7 555554 46678899999998 77655443 467788999999988874445568999999999999985
Q ss_pred ccccchhhhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEec
Q 037494 300 HYHSGVSKSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSN 347 (394)
Q Consensus 300 ~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~ 347 (394)
...++ .++.+++|+.|++++ ++++.+ |.++. +++|+.|+|++
T Consensus 185 --l~~l~-~l~~l~~L~~L~Ls~-N~lt~i-~~l~~-l~~L~~L~lsn 226 (227)
T d1h6ua2 185 --ISDIS-PLASLPNLIEVHLKN-NQISDV-SPLAN-TSNLFIVTLTN 226 (227)
T ss_dssp --CCCCG-GGGGCTTCCEEECTT-SCCCBC-GGGTT-CTTCCEEEEEE
T ss_pred --cCCCh-hhcCCCCCCEEECcC-CcCCCC-ccccc-CCCCCEEEeeC
Confidence 33343 478899999999999 578888 65667 89999999974
No 16
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes [TaxId: 1639]}
Probab=99.63 E-value=1.6e-15 Score=128.09 Aligned_cols=143 Identities=18% Similarity=0.177 Sum_probs=70.4
Q ss_pred CCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcE
Q 037494 143 DMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLET 222 (394)
Q Consensus 143 ~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~ 222 (394)
+.+++.|.+.++... .++++ +.+++|++|++++|.++.+++ ++++++|++|++++|.+..+| .++.+++|+.
T Consensus 39 l~~l~~L~l~~~~i~-----~l~~l-~~l~nL~~L~Ls~N~l~~~~~-l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~ 110 (199)
T d2omxa2 39 LDQVTTLQADRLGIK-----SIDGV-EYLNNLTQINFSNNQLTDITP-LKNLTKLVDILMNNNQIADIT-PLANLTNLTG 110 (199)
T ss_dssp HTTCCEEECTTSCCC-----CCTTG-GGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCSE
T ss_pred hcCCCEEECCCCCCC-----Ccccc-ccCCCcCcCccccccccCccc-ccCCccccccccccccccccc-cccccccccc
Confidence 345555555555443 22333 455555555555555554443 555555555555555555544 3455555555
Q ss_pred EEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEeec
Q 037494 223 LEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISGD 297 (394)
Q Consensus 223 L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~~ 297 (394)
|+++ + ....++ .+..+++|+.|+++ +|....++ .+..+++|+.|.+.++.....+.++.+++|+.|++++|
T Consensus 111 L~l~~~-~~~~~~-~~~~l~~L~~L~l~-~n~l~~~~-~l~~~~~L~~L~l~~n~l~~l~~l~~l~~L~~L~ls~N 182 (199)
T d2omxa2 111 LTLFNN-QITDID-PLKNLTNLNRLELS-SNTISDIS-ALSGLTSLQQLNFSSNQVTDLKPLANLTTLERLDISSN 182 (199)
T ss_dssp EECCSS-CCCCCG-GGTTCTTCSEEECC-SSCCCCCG-GGTTCTTCSEEECCSSCCCCCGGGTTCTTCCEEECCSS
T ss_pred cccccc-cccccc-ccchhhhhHHhhhh-hhhhcccc-cccccccccccccccccccCCccccCCCCCCEEECCCC
Confidence 5555 4 333332 24455555555555 55443332 34455555555555444222233455555555555554
No 17
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=3.4e-14 Score=123.41 Aligned_cols=191 Identities=13% Similarity=0.072 Sum_probs=127.4
Q ss_pred CceeEEEcCCCCCCCCcc-cccCcccccEEecCCCCCcc-cc-ccccCCCCCcEEEcc-cCCccccch-hhccCccCcEE
Q 037494 172 KYLRVLNWGSAVLDQFPP-GLENLFLLKYLQLNIPTLKC-LP-LLICTLLNLETLEMP-AGYIDHSPE-GIWMMQKLMHL 246 (394)
Q Consensus 172 ~~L~~L~l~~~~~~~lp~-~i~~l~~L~~L~l~~~~l~~-lp-~~l~~l~~L~~L~l~-~~~l~~lp~-~i~~l~~L~~L 246 (394)
+++++|++++|.++.+|. .+.++++|++|++++|.+.. +| ..+.++++++++.+. ++.+..++. .+..+++|+++
T Consensus 29 ~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~~~n~l~~~~~~~~~~l~~L~~l 108 (242)
T d1xwdc1 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYL 108 (242)
T ss_dssp SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEECCTTCCEECTTSEECCTTCCEE
T ss_pred CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccccccccccccccccccccccccc
Confidence 478888898888888774 57888899999998887664 33 346778888888887 546666654 46788899999
Q ss_pred EeeCCCCCCCCCCCCCCCCcCceeC---ccccC-CC-cchhcCCCC-CCCeEEEeecCCccccchhhhhcCCCCCcEEEe
Q 037494 247 NFDSITLPAPPKNYSSSLKNLIFIS---ALHPS-SC-TPDILSRLP-TVQTLRISGDLSHYHSGVSKSLCELHKLECLKL 320 (394)
Q Consensus 247 ~l~~~~~~~~~p~~l~~l~~L~~L~---~~~~~-~~-~~~~l~~l~-~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l 320 (394)
+++ ++.....+. ...+.+++.+. ..+.. .. ....+..++ .++.|++.++. ...++.......+++.+..
T Consensus 109 ~l~-~~~l~~~~~-~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~n~---l~~i~~~~~~~~~l~~~~~ 183 (242)
T d1xwdc1 109 LIS-NTGIKHLPD-VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG---IQEIHNCAFNGTQLDELNL 183 (242)
T ss_dssp EEE-SCCCCSCCC-CTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC---CCEECTTTTTTCCEEEEEC
T ss_pred ccc-hhhhccccc-ccccccccccccccccccccccccccccccccccceeeeccccc---ccccccccccchhhhcccc
Confidence 998 877655443 33344444443 23222 11 122333333 56777777764 3344444445566666655
Q ss_pred cCCCCCCccCC--CCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEE
Q 037494 321 VNGSKLSRMVL--SEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKL 369 (394)
Q Consensus 321 ~~~~~L~~L~p--~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l 369 (394)
..+++++++ | .+.. +++|+.|+|++|+++..+...+.++++|+.+++
T Consensus 184 l~~n~l~~l-~~~~f~~-l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~l~~ 232 (242)
T d1xwdc1 184 SDNNNLEEL-PNDVFHG-ASGPVILDISRTRIHSLPSYGLENLKKLRARST 232 (242)
T ss_dssp TTCTTCCCC-CTTTTTT-SCCCSEEECTTSCCCCCCSSSCTTCCEEESSSE
T ss_pred ccccccccc-cHHHhcC-CCCCCEEECCCCcCCccCHHHHcCCcccccCcC
Confidence 444778888 6 4677 899999999999887665556677777777766
No 18
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.52 E-value=6.5e-14 Score=121.64 Aligned_cols=198 Identities=13% Similarity=0.130 Sum_probs=141.3
Q ss_pred eEEEcCCCCCCCCcccccCcccccEEecCCCCCcccccc-ccCCCCCcEEEcc-cCCccccch-hhccCccCcEEEeeCC
Q 037494 175 RVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLL-ICTLLNLETLEMP-AGYIDHSPE-GIWMMQKLMHLNFDSI 251 (394)
Q Consensus 175 ~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~-l~~l~~L~~L~l~-~~~l~~lp~-~i~~l~~L~~L~l~~~ 251 (394)
++++.++..++.+|+.+. .++++|++++|.++.+|.. +.++++|++|+++ |.....+|. .+..+++++++.+. .
T Consensus 11 ~~i~c~~~~l~~iP~~l~--~~l~~L~Ls~n~i~~l~~~~f~~l~~L~~L~ls~n~~~~~i~~~~f~~l~~l~~l~~~-~ 87 (242)
T d1xwdc1 11 RVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE-K 87 (242)
T ss_dssp SEEEEESCSCSSCCSCSC--SCCSEEEEESCCCCEECTTTTTTCTTCCEEEEESCTTCCEECSSSEESCTTCCEEEEE-C
T ss_pred CEEEEeCCCCCCcCCCCC--CCCCEEECcCCcCCccChhHhhccchhhhhhhccccccceeecccccccccccccccc-c
Confidence 678888888999997664 5899999999999999874 7889999999999 833344543 47789999999987 5
Q ss_pred C-CCCCCC-CCCCCCCcCceeCccccCCCcchhcCCCCCCCeEEEeecCCccccchh-hhhcCC-CCCcEEEecCCCCCC
Q 037494 252 T-LPAPPK-NYSSSLKNLIFISALHPSSCTPDILSRLPTVQTLRISGDLSHYHSGVS-KSLCEL-HKLECLKLVNGSKLS 327 (394)
Q Consensus 252 ~-~~~~~p-~~l~~l~~L~~L~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~-~~l~~~-~~L~~L~l~~~~~L~ 327 (394)
+ .....+ ..+..+++|+.+.+..+..........+..++.+............++ ..+..+ ..++.|++.+ +.+.
T Consensus 88 ~n~l~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~~~~~l~~l~~~~~~n~~l~~i~~~~~~~~~~~l~~L~l~~-n~l~ 166 (242)
T d1xwdc1 88 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK-NGIQ 166 (242)
T ss_dssp CTTCCEECTTSEECCTTCCEEEEESCCCCSCCCCTTTCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS-SCCC
T ss_pred cccccccccccccccccccccccchhhhcccccccccccccccccccccccccccccccccccccccceeeeccc-cccc
Confidence 4 354444 447889999999999887333334455556665554433311233332 334444 3788889887 7788
Q ss_pred ccCC-CCCCCCCCceEEE-EecccCCCCCcccccCCCCCCeEEEecccccCce
Q 037494 328 RMVL-SEYQFPPSLIQLS-LSNTELMEDPMPMLERLPRLQVMKLKRNSYFGRK 378 (394)
Q Consensus 328 ~L~p-~~~~~l~~L~~L~-L~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~ 378 (394)
.+ + .... .++++.+. +.+|+++..+...+.++++|++|++++|++....
T Consensus 167 ~i-~~~~~~-~~~l~~~~~l~~n~l~~l~~~~f~~l~~L~~L~Ls~N~l~~l~ 217 (242)
T d1xwdc1 167 EI-HNCAFN-GTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLP 217 (242)
T ss_dssp EE-CTTTTT-TCCEEEEECTTCTTCCCCCTTTTTTSCCCSEEECTTSCCCCCC
T ss_pred cc-cccccc-chhhhccccccccccccccHHHhcCCCCCCEEECCCCcCCccC
Confidence 88 5 4444 56666665 5667887666667899999999999999887543
No 19
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.47 E-value=7.2e-14 Score=108.04 Aligned_cols=98 Identities=23% Similarity=0.267 Sum_probs=69.4
Q ss_pred eEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCC
Q 037494 175 RVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITL 253 (394)
Q Consensus 175 ~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~ 253 (394)
|+|++++|.++.++. ++.+++|++|++++|.++.+|+.++.+++|++|+++ | .+..+| +++.+++|++|+++ +|.
T Consensus 1 R~L~Ls~n~l~~l~~-l~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N-~i~~l~-~~~~l~~L~~L~l~-~N~ 76 (124)
T d1dcea3 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDN-ALENVD-GVANLPRLQELLLC-NNR 76 (124)
T ss_dssp SEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSS-CCCCCG-GGTTCSSCCEEECC-SSC
T ss_pred CEEEcCCCCCCCCcc-cccCCCCCEEECCCCccCcchhhhhhhhcccccccccc-cccccC-ccccccccCeEECC-CCc
Confidence 577888888877764 777788888888888888887777778888888888 7 777776 47778888888887 776
Q ss_pred CCCCCC--CCCCCCcCceeCccccC
Q 037494 254 PAPPKN--YSSSLKNLIFISALHPS 276 (394)
Q Consensus 254 ~~~~p~--~l~~l~~L~~L~~~~~~ 276 (394)
+..+|. .++.+++|++|++.++.
T Consensus 77 i~~~~~~~~l~~~~~L~~L~l~~N~ 101 (124)
T d1dcea3 77 LQQSAAIQPLVSCPRLVLLNLQGNS 101 (124)
T ss_dssp CCSSSTTGGGGGCTTCCEEECTTSG
T ss_pred cCCCCCchhhcCCCCCCEEECCCCc
Confidence 655542 24445555555554443
No 20
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.45 E-value=3.1e-15 Score=133.53 Aligned_cols=193 Identities=16% Similarity=0.148 Sum_probs=113.3
Q ss_pred ccCCceeEEEcCCCCCC--CCcccccCcccccEEecCCCCCc-cccccccCCCCCcEEEcc-cCCccc--cchhhccCcc
Q 037494 169 ENFKYLRVLNWGSAVLD--QFPPGLENLFLLKYLQLNIPTLK-CLPLLICTLLNLETLEMP-AGYIDH--SPEGIWMMQK 242 (394)
Q Consensus 169 ~~l~~L~~L~l~~~~~~--~lp~~i~~l~~L~~L~l~~~~l~-~lp~~l~~l~~L~~L~l~-~~~l~~--lp~~i~~l~~ 242 (394)
.....|++|+++++.+. .++..+..+++|++|+++++.+. ..+..++.+++|++|+++ |..+.. +..-...+++
T Consensus 43 ~~~~~L~~LdLs~~~i~~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~~~~ 122 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSR 122 (284)
T ss_dssp CCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTT
T ss_pred ccCCCCCEEECCCCccCHHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHHHHh
Confidence 34557788888877765 34455667778888888887665 345567777888888887 645542 2222346778
Q ss_pred CcEEEeeCCCC-CCC--CCCCCCC-CCcCceeCccccC-----CCcchhcCCCCCCCeEEEeecCCccccchhhhhcCCC
Q 037494 243 LMHLNFDSITL-PAP--PKNYSSS-LKNLIFISALHPS-----SCTPDILSRLPTVQTLRISGDLSHYHSGVSKSLCELH 313 (394)
Q Consensus 243 L~~L~l~~~~~-~~~--~p~~l~~-l~~L~~L~~~~~~-----~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~l~~~~ 313 (394)
|++|+++ +|. ... +...+.. .++|+.|.+.++. .....-...+++|++|++++|.. ..+.....+..++
T Consensus 123 L~~L~ls-~c~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~-itd~~~~~l~~~~ 200 (284)
T d2astb2 123 LDELNLS-WCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVM-LKNDCFQEFFQLN 200 (284)
T ss_dssp CCEEECC-CCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTT-CCGGGGGGGGGCT
T ss_pred ccccccc-cccccccccchhhhcccccccchhhhcccccccccccccccccccccccccccccccC-CCchhhhhhcccC
Confidence 8888887 764 211 1111222 3467777776543 11112234567777777776641 2234445666777
Q ss_pred CCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccCCCCCcccc-cCCCCCC
Q 037494 314 KLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTELMEDPMPML-ERLPRLQ 365 (394)
Q Consensus 314 ~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l-~~l~~L~ 365 (394)
+|++|++++|+++..-.. .++. +++|+.|++++| +....++.+ ..+|+|+
T Consensus 201 ~L~~L~L~~C~~i~~~~l~~L~~-~~~L~~L~l~~~-~~d~~l~~l~~~lp~L~ 252 (284)
T d2astb2 201 YLQHLSLSRCYDIIPETLLELGE-IPTLKTLQVFGI-VPDGTLQLLKEALPHLQ 252 (284)
T ss_dssp TCCEEECTTCTTCCGGGGGGGGG-CTTCCEEECTTS-SCTTCHHHHHHHSTTSE
T ss_pred cCCEEECCCCCCCChHHHHHHhc-CCCCCEEeeeCC-CCHHHHHHHHHhCcccc
Confidence 777777777665543212 4455 677777777777 344444443 2455543
No 21
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.43 E-value=1.2e-12 Score=119.55 Aligned_cols=155 Identities=16% Similarity=0.066 Sum_probs=86.4
Q ss_pred eEEEEEEeCCcchhhccCCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecC
Q 037494 124 VKRCFILEDLIEFISLEQSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLN 203 (394)
Q Consensus 124 ~r~L~l~~~~~~~~~~~~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~ 203 (394)
+++|.+.......+|+ ..++|++|.+.++... .+|+ .+.+|+.|++++|.++.++.-. ..|++|+++
T Consensus 40 l~~LdLs~~~L~~lp~--~~~~L~~L~Ls~N~l~-----~lp~---~~~~L~~L~l~~n~l~~l~~lp---~~L~~L~L~ 106 (353)
T d1jl5a_ 40 AHELELNNLGLSSLPE--LPPHLESLVASCNSLT-----ELPE---LPQSLKSLLVDNNNLKALSDLP---PLLEYLGVS 106 (353)
T ss_dssp CSEEECTTSCCSCCCS--CCTTCSEEECCSSCCS-----SCCC---CCTTCCEEECCSSCCSCCCSCC---TTCCEEECC
T ss_pred CCEEEeCCCCCCCCCC--CCCCCCEEECCCCCCc-----cccc---chhhhhhhhhhhcccchhhhhc---ccccccccc
Confidence 4455555444444443 2456777777766554 2332 2356677777777766554311 346777777
Q ss_pred CCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCCCcCceeCccccC------
Q 037494 204 IPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSLKNLIFISALHPS------ 276 (394)
Q Consensus 204 ~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~~~~------ 276 (394)
+|.+..+|. .+.+++|++|+++ + .+...|.. ...+..+.+. .+.... +..++.++.++.+.+..+.
T Consensus 107 ~n~l~~lp~-~~~l~~L~~L~l~~~-~~~~~~~~---~~~l~~l~~~-~~~~~~-~~~l~~l~~l~~L~l~~n~~~~~~~ 179 (353)
T d1jl5a_ 107 NNQLEKLPE-LQNSSFLKIIDVDNN-SLKKLPDL---PPSLEFIAAG-NNQLEE-LPELQNLPFLTAIYADNNSLKKLPD 179 (353)
T ss_dssp SSCCSSCCC-CTTCTTCCEEECCSS-CCSCCCCC---CTTCCEEECC-SSCCSS-CCCCTTCTTCCEEECCSSCCSSCCC
T ss_pred ccccccccc-hhhhccceeeccccc-cccccccc---cccccchhhc-cccccc-cccccccccceeccccccccccccc
Confidence 777777763 5667777777777 5 55555432 3445555555 433222 2335566666666654443
Q ss_pred --------------CCcchhcCCCCCCCeEEEeecC
Q 037494 277 --------------SCTPDILSRLPTVQTLRISGDL 298 (394)
Q Consensus 277 --------------~~~~~~l~~l~~L~~L~l~~~~ 298 (394)
.........++.|+.+.++++.
T Consensus 180 ~~~~~~~l~~~~~~~~~~~~~~~l~~L~~l~l~~n~ 215 (353)
T d1jl5a_ 180 LPLSLESIVAGNNILEELPELQNLPFLTTIYADNNL 215 (353)
T ss_dssp CCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSC
T ss_pred cccccccccccccccccccccccccccccccccccc
Confidence 1122334556777888777664
No 22
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase alpha-subunit, C-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.40 E-value=2.5e-13 Score=104.97 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=89.7
Q ss_pred cEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc
Q 037494 147 QSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP 226 (394)
Q Consensus 147 r~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~ 226 (394)
|.|.+.++... .++.+ ..+++|++|++++|.++.+|+.++.+++|+.|++++|.++.+| +++++++|++|+++
T Consensus 1 R~L~Ls~n~l~-----~l~~l-~~l~~L~~L~ls~N~l~~lp~~~~~l~~L~~L~l~~N~i~~l~-~~~~l~~L~~L~l~ 73 (124)
T d1dcea3 1 RVLHLAHKDLT-----VLCHL-EQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLC 73 (124)
T ss_dssp SEEECTTSCCS-----SCCCG-GGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECC
T ss_pred CEEEcCCCCCC-----CCccc-ccCCCCCEEECCCCccCcchhhhhhhhcccccccccccccccC-ccccccccCeEECC
Confidence 56778888776 44555 8999999999999999999999999999999999999999997 69999999999999
Q ss_pred -cCCccccch--hhccCccCcEEEeeCCCCCCCCC
Q 037494 227 -AGYIDHSPE--GIWMMQKLMHLNFDSITLPAPPK 258 (394)
Q Consensus 227 -~~~l~~lp~--~i~~l~~L~~L~l~~~~~~~~~p 258 (394)
| .+..+|. .++.+++|++|+++ +|.+...+
T Consensus 74 ~N-~i~~~~~~~~l~~~~~L~~L~l~-~N~i~~~~ 106 (124)
T d1dcea3 74 NN-RLQQSAAIQPLVSCPRLVLLNLQ-GNSLCQEE 106 (124)
T ss_dssp SS-CCCSSSTTGGGGGCTTCCEEECT-TSGGGGSS
T ss_pred CC-ccCCCCCchhhcCCCCCCEEECC-CCcCCcCc
Confidence 8 8888873 68899999999999 88755443
No 23
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.39 E-value=1.9e-13 Score=110.84 Aligned_cols=105 Identities=18% Similarity=0.090 Sum_probs=76.5
Q ss_pred ccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhh-ccCccCcEE
Q 037494 169 ENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGI-WMMQKLMHL 246 (394)
Q Consensus 169 ~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i-~~l~~L~~L 246 (394)
.+...+|.|++++|+++.++..+..+.+|++|++++|.+..++ .+..+++|++|+++ | .+..+|+.+ ..+++|++|
T Consensus 15 ~n~~~lr~L~L~~n~I~~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N-~i~~l~~~~~~~l~~L~~L 92 (162)
T d1a9na_ 15 TNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNN-RICRIGEGLDQALPDLTEL 92 (162)
T ss_dssp ECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSS-CCCEECSCHHHHCTTCCEE
T ss_pred cCcCcCcEEECCCCCCCccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccc-cccCCCccccccccccccc
Confidence 5667788888888888888766677888888888888888875 57788888888888 7 787777654 468888888
Q ss_pred EeeCCCCCCCCCC--CCCCCCcCceeCccccC
Q 037494 247 NFDSITLPAPPKN--YSSSLKNLIFISALHPS 276 (394)
Q Consensus 247 ~l~~~~~~~~~p~--~l~~l~~L~~L~~~~~~ 276 (394)
+++ +|.+..++. .+..+++|++|++.+|.
T Consensus 93 ~L~-~N~i~~~~~l~~l~~l~~L~~L~l~~N~ 123 (162)
T d1a9na_ 93 ILT-NNSLVELGDLDPLASLKSLTYLCILRNP 123 (162)
T ss_dssp ECC-SCCCCCGGGGGGGGGCTTCCEEECCSSG
T ss_pred eec-cccccccccccccccccccchhhcCCCc
Confidence 888 777655542 34455555555555544
No 24
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.37 E-value=2.1e-13 Score=110.62 Aligned_cols=129 Identities=11% Similarity=0.039 Sum_probs=107.0
Q ss_pred ccCCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccc-cCC
Q 037494 139 LEQSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLI-CTL 217 (394)
Q Consensus 139 ~~~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l-~~l 217 (394)
......++|.|.+.++.+. .+++++..+++|++|++++|.+++++ .+..+++|++|++++|.+..+|+.+ ..+
T Consensus 13 ~~~n~~~lr~L~L~~n~I~-----~i~~~~~~l~~L~~L~Ls~N~i~~l~-~~~~l~~L~~L~ls~N~i~~l~~~~~~~l 86 (162)
T d1a9na_ 13 QYTNAVRDRELDLRGYKIP-----VIENLGATLDQFDAIDFSDNEIRKLD-GFPLLRRLKTLLVNNNRICRIGEGLDQAL 86 (162)
T ss_dssp EEECTTSCEEEECTTSCCC-----SCCCGGGGTTCCSEEECCSSCCCEEC-CCCCCSSCCEEECCSSCCCEECSCHHHHC
T ss_pred hccCcCcCcEEECCCCCCC-----ccCccccccccCCEEECCCCCCCccC-CcccCcchhhhhcccccccCCCccccccc
Confidence 3356778999999999887 44555578999999999999999885 5889999999999999999998765 579
Q ss_pred CCCcEEEcc-cCCccccch--hhccCccCcEEEeeCCCCCCCCCC----CCCCCCcCceeCcccc
Q 037494 218 LNLETLEMP-AGYIDHSPE--GIWMMQKLMHLNFDSITLPAPPKN----YSSSLKNLIFISALHP 275 (394)
Q Consensus 218 ~~L~~L~l~-~~~l~~lp~--~i~~l~~L~~L~l~~~~~~~~~p~----~l~~l~~L~~L~~~~~ 275 (394)
++|++|+++ | .+..++. .+..+++|++|+++ +|+....|. .++.+++|+.|+....
T Consensus 87 ~~L~~L~L~~N-~i~~~~~l~~l~~l~~L~~L~l~-~N~i~~~~~~r~~~i~~lp~L~~LD~~~i 149 (162)
T d1a9na_ 87 PDLTELILTNN-SLVELGDLDPLASLKSLTYLCIL-RNPVTNKKHYRLYVIYKVPQVRVLDFQKV 149 (162)
T ss_dssp TTCCEEECCSC-CCCCGGGGGGGGGCTTCCEEECC-SSGGGGSTTHHHHHHHHCTTCSEETTEEC
T ss_pred cccccceeccc-cccccccccccccccccchhhcC-CCccccccchHHHHHHHCCCcCeeCCCCC
Confidence 999999999 8 8888764 57889999999999 998777664 2567778888775543
No 25
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.34 E-value=4.7e-14 Score=125.66 Aligned_cols=210 Identities=14% Similarity=0.061 Sum_probs=134.7
Q ss_pred CCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCC-CCcccccCcccccEEecCCC-CCcc--ccccccC
Q 037494 141 QSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLD-QFPPGLENLFLLKYLQLNIP-TLKC--LPLLICT 216 (394)
Q Consensus 141 ~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~-~lp~~i~~l~~L~~L~l~~~-~l~~--lp~~l~~ 216 (394)
....+++.|++.++... ...+..++..+++|++|+++++.+. ..+..++.+++|++|++++| .++. +..-...
T Consensus 43 ~~~~~L~~LdLs~~~i~---~~~l~~l~~~c~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~Ls~c~~itd~~l~~l~~~ 119 (284)
T d2astb2 43 FSPFRVQHMDLSNSVIE---VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS 119 (284)
T ss_dssp CCCBCCCEEECTTCEEC---HHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHH
T ss_pred ccCCCCCEEECCCCccC---HHHHHHHHHhCCCcccccccccCCCcHHHHHHhcCCCCcCccccccccccccccchhhHH
Confidence 34567888888776554 2344666788899999999988876 45567788889999999885 5652 3333456
Q ss_pred CCCCcEEEcc-cCCccc--cchhhcc-CccCcEEEeeCCCC--CCC--CCCCCCCCCcCceeCccccC---CCcchhcCC
Q 037494 217 LLNLETLEMP-AGYIDH--SPEGIWM-MQKLMHLNFDSITL--PAP--PKNYSSSLKNLIFISALHPS---SCTPDILSR 285 (394)
Q Consensus 217 l~~L~~L~l~-~~~l~~--lp~~i~~-l~~L~~L~l~~~~~--~~~--~p~~l~~l~~L~~L~~~~~~---~~~~~~l~~ 285 (394)
+++|++|+++ |..+.. ++..+.. .++|+.|+++ ++. ... +......+++|++|++.+|. ...+..+..
T Consensus 120 ~~~L~~L~ls~c~~~~~~~~~~~~~~~~~~L~~L~l~-~~~~~i~~~~l~~l~~~~~~L~~L~L~~~~~itd~~~~~l~~ 198 (284)
T d2astb2 120 CSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLS-GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQ 198 (284)
T ss_dssp CTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECC-SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGG
T ss_pred HHhccccccccccccccccchhhhcccccccchhhhc-ccccccccccccccccccccccccccccccCCCchhhhhhcc
Confidence 7889999998 755532 2233433 3678999888 753 111 11112456788999888776 356677888
Q ss_pred CCCCCeEEEeecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccCCCCCcccccC
Q 037494 286 LPTVQTLRISGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTELMEDPMPMLER 360 (394)
Q Consensus 286 l~~L~~L~l~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~~~~~l~~ 360 (394)
+++|++|++++|.. ..+.....++.+++|+.|++.+|-.-..+ + .... +|+|+ +..+.++....+.++.
T Consensus 199 ~~~L~~L~L~~C~~-i~~~~l~~L~~~~~L~~L~l~~~~~d~~l-~~l~~~-lp~L~---i~~~~ls~~~~~~~~~ 268 (284)
T d2astb2 199 LNYLQHLSLSRCYD-IIPETLLELGEIPTLKTLQVFGIVPDGTL-QLLKEA-LPHLQ---INCSHFTTIARPTIGN 268 (284)
T ss_dssp CTTCCEEECTTCTT-CCGGGGGGGGGCTTCCEEECTTSSCTTCH-HHHHHH-STTSE---ESCCCSCCTTCSSCSS
T ss_pred cCcCCEEECCCCCC-CChHHHHHHhcCCCCCEEeeeCCCCHHHH-HHHHHh-Ccccc---ccCccCCCCCCCccCc
Confidence 88999999988751 23344456777889999998874111111 1 1122 45554 5555655554555543
No 26
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia pestis [TaxId: 632]}
Probab=99.28 E-value=2.2e-11 Score=110.80 Aligned_cols=228 Identities=19% Similarity=0.173 Sum_probs=128.4
Q ss_pred CCceEEEEEEeCCcchhhccCCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCCcccccCcccccEE
Q 037494 121 LATVKRCFILEDLIEFISLEQSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYL 200 (394)
Q Consensus 121 ~~~~r~L~l~~~~~~~~~~~~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L 200 (394)
+..+++|.+..+....+|.. ..+|+.|.+.++... .++++ .+.|++|++++|.+..+|. ++.+++|+.|
T Consensus 57 ~~~L~~L~Ls~N~l~~lp~~--~~~L~~L~l~~n~l~-----~l~~l---p~~L~~L~L~~n~l~~lp~-~~~l~~L~~L 125 (353)
T d1jl5a_ 57 PPHLESLVASCNSLTELPEL--PQSLKSLLVDNNNLK-----ALSDL---PPLLEYLGVSNNQLEKLPE-LQNSSFLKII 125 (353)
T ss_dssp CTTCSEEECCSSCCSSCCCC--CTTCCEEECCSSCCS-----CCCSC---CTTCCEEECCSSCCSSCCC-CTTCTTCCEE
T ss_pred CCCCCEEECCCCCCcccccc--hhhhhhhhhhhcccc-----hhhhh---ccccccccccccccccccc-hhhhccceee
Confidence 55788999987777777653 578999999988776 33322 2469999999999999885 6889999999
Q ss_pred ecCCCCCcccccc-------------------ccCCCCCcEEEcc-cCCccccch-------------------hhccCc
Q 037494 201 QLNIPTLKCLPLL-------------------ICTLLNLETLEMP-AGYIDHSPE-------------------GIWMMQ 241 (394)
Q Consensus 201 ~l~~~~l~~lp~~-------------------l~~l~~L~~L~l~-~~~l~~lp~-------------------~i~~l~ 241 (394)
+++++.+...|.. ++.+..++.+.+. + .....+. ....++
T Consensus 126 ~l~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~l~~l~~l~~L~l~~n-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~ 204 (353)
T d1jl5a_ 126 DVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNN-SLKKLPDLPLSLESIVAGNNILEELPELQNLP 204 (353)
T ss_dssp ECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSS-CCSSCCCCCTTCCEEECCSSCCSSCCCCTTCT
T ss_pred ccccccccccccccccccchhhccccccccccccccccceecccccc-cccccccccccccccccccccccccccccccc
Confidence 9999877655543 2334444555444 3 2221111 122233
Q ss_pred cCcEEEeeCCCCCCCCCCCCCCCCcCceeCccccC-CCcchhcCCCCCCCeEEEeecCCcc--------------ccchh
Q 037494 242 KLMHLNFDSITLPAPPKNYSSSLKNLIFISALHPS-SCTPDILSRLPTVQTLRISGDLSHY--------------HSGVS 306 (394)
Q Consensus 242 ~L~~L~l~~~~~~~~~p~~l~~l~~L~~L~~~~~~-~~~~~~l~~l~~L~~L~l~~~~~~~--------------~~~~~ 306 (394)
.|+.++++ ++....+|..... +..+.+..+. ...+ .....+....+..+.... ...+.
T Consensus 205 ~L~~l~l~-~n~~~~~~~~~~~---l~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~ 277 (353)
T d1jl5a_ 205 FLTTIYAD-NNLLKTLPDLPPS---LEALNVRDNYLTDLP---ELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIR 277 (353)
T ss_dssp TCCEEECC-SSCCSSCCSCCTT---CCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCS
T ss_pred cccccccc-ccccccccccccc---ccccccccccccccc---cccccccccccccccccccccccchhcccccccCccc
Confidence 44444444 3332222222111 1111111111 0000 001122222222111000 00111
Q ss_pred hhhcCCCCCcEEEecCCCCCCccCCCCCCCCCCceEEEEecccCCCCCcccccCCCCCCeEEEecccccC
Q 037494 307 KSLCELHKLECLKLVNGSKLSRMVLSEYQFPPSLIQLSLSNTELMEDPMPMLERLPRLQVMKLKRNSYFG 376 (394)
Q Consensus 307 ~~l~~~~~L~~L~l~~~~~L~~L~p~~~~~l~~L~~L~L~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~ 376 (394)
.....+++|++|++++ +++..+ | .. +++|+.|+|++|+++.. +. .+++|++|++++|.+..
T Consensus 278 ~~~~~~~~L~~L~Ls~-N~l~~l-p--~~-~~~L~~L~L~~N~L~~l--~~--~~~~L~~L~L~~N~L~~ 338 (353)
T d1jl5a_ 278 SLCDLPPSLEELNVSN-NKLIEL-P--AL-PPRLERLIASFNHLAEV--PE--LPQNLKQLHVEYNPLRE 338 (353)
T ss_dssp EECCCCTTCCEEECCS-SCCSCC-C--CC-CTTCCEEECCSSCCSCC--CC--CCTTCCEEECCSSCCSS
T ss_pred cccccCCCCCEEECCC-CccCcc-c--cc-cCCCCEEECCCCcCCcc--cc--ccCCCCEEECcCCcCCC
Confidence 1123357899999988 578877 6 12 56799999999988542 22 35689999999888754
No 27
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.20 E-value=5.7e-12 Score=105.13 Aligned_cols=120 Identities=17% Similarity=0.174 Sum_probs=83.7
Q ss_pred eEEEcCCCCCCCCcccccCcccccEEecCCCCCcc-cc-ccccCCCCCcEEEcc-cCCccccc-hhhccCccCcEEEeeC
Q 037494 175 RVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKC-LP-LLICTLLNLETLEMP-AGYIDHSP-EGIWMMQKLMHLNFDS 250 (394)
Q Consensus 175 ~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~-lp-~~l~~l~~L~~L~l~-~~~l~~lp-~~i~~l~~L~~L~l~~ 250 (394)
++++.++++++.+|..+. .++++|+|++|.|.. ++ ..+.++++|++|+++ + .+..++ ..+..+++|++|+++
T Consensus 11 ~~v~Cs~~~L~~iP~~lp--~~l~~L~Ls~N~i~~~~~~~~f~~l~~L~~L~L~~N-~i~~~~~~~~~~~~~L~~L~Ls- 86 (192)
T d1w8aa_ 11 TTVDCTGRGLKEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRN-QLTGIEPNAFEGASHIQELQLG- 86 (192)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSS-CCCCBCTTTTTTCTTCCEEECC-
T ss_pred CEEEEeCCCcCccCCCCC--CCCCEEEeCCCCCcccccccccCCCceEeeeecccc-ccccccccccccccccceeeec-
Confidence 467777777877777664 577888888888764 33 345677888888888 6 665554 456677888888888
Q ss_pred CCCCCCCCCC-CCCCCcCceeCccccC-CCc-chhcCCCCCCCeEEEeecC
Q 037494 251 ITLPAPPKNY-SSSLKNLIFISALHPS-SCT-PDILSRLPTVQTLRISGDL 298 (394)
Q Consensus 251 ~~~~~~~p~~-l~~l~~L~~L~~~~~~-~~~-~~~l~~l~~L~~L~l~~~~ 298 (394)
+|.+..+|+. ++++++|++|++.++. ... +..+..+++|++|+++++.
T Consensus 87 ~N~l~~l~~~~F~~l~~L~~L~L~~N~l~~i~~~~f~~l~~L~~l~L~~N~ 137 (192)
T d1w8aa_ 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNP 137 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCC
T ss_pred cccccccCHHHHhCCCcccccccCCccccccCHHHhcCCcccccccccccc
Confidence 7777766654 6777777777777776 322 3346677777777777765
No 28
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=99.16 E-value=4e-11 Score=99.88 Aligned_cols=126 Identities=17% Similarity=0.179 Sum_probs=95.5
Q ss_pred CcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCC-CC-CCCCCCCcCceeCccccC--CCcchhcCCCCCCCeEEE
Q 037494 220 LETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAP-PK-NYSSSLKNLIFISALHPS--SCTPDILSRLPTVQTLRI 294 (394)
Q Consensus 220 L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~-~p-~~l~~l~~L~~L~~~~~~--~~~~~~l~~l~~L~~L~l 294 (394)
..+++.+ + .+..+|.++. +++++|+++ +|.+.. ++ ..++.+++|+.|++.++. ...+..+..+++|+.|++
T Consensus 10 ~~~v~Cs~~-~L~~iP~~lp--~~l~~L~Ls-~N~i~~~~~~~~f~~l~~L~~L~L~~N~i~~~~~~~~~~~~~L~~L~L 85 (192)
T d1w8aa_ 10 GTTVDCTGR-GLKEIPRDIP--LHTTELLLN-DNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQL 85 (192)
T ss_dssp TTEEECTTS-CCSSCCSCCC--TTCSEEECC-SCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCEEEEeCC-CcCccCCCCC--CCCCEEEeC-CCCCcccccccccCCCceEeeeeccccccccccccccccccccceeee
Confidence 3567888 6 8889998764 689999999 988654 33 346788899999988877 445567778888888888
Q ss_pred eecCCccccchhhhhcCCCCCcEEEecCCCCCCccCC-CCCCCCCCceEEEEecccCCCC
Q 037494 295 SGDLSHYHSGVSKSLCELHKLECLKLVNGSKLSRMVL-SEYQFPPSLIQLSLSNTELMED 353 (394)
Q Consensus 295 ~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~p-~~~~~l~~L~~L~L~~~~l~~~ 353 (394)
++|. .....+..|.++++|+.|+|++ ++++.+.| ++.. +++|++|+|++|.+.+.
T Consensus 86 s~N~--l~~l~~~~F~~l~~L~~L~L~~-N~l~~i~~~~f~~-l~~L~~l~L~~N~~~~~ 141 (192)
T d1w8aa_ 86 GENK--IKEISNKMFLGLHQLKTLNLYD-NQISCVMPGSFEH-LNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CSCC--CCEECSSSSTTCTTCCEEECCS-SCCCEECTTSSTT-CTTCCEEECTTCCBCCS
T ss_pred cccc--ccccCHHHHhCCCcccccccCC-ccccccCHHHhcC-Ccccccccccccccccc
Confidence 8885 4433345678888888888888 77888834 6777 88888888888887543
No 29
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.15 E-value=2.4e-13 Score=114.15 Aligned_cols=109 Identities=18% Similarity=0.149 Sum_probs=47.0
Q ss_pred CCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccCcEEEeeCCCCCCCCCCCCCCC
Q 037494 186 QFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKLMHLNFDSITLPAPPKNYSSSL 264 (394)
Q Consensus 186 ~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~~L~l~~~~~~~~~p~~l~~l 264 (394)
.++.+++.+++|++|++++|.|+.++ .++.+++|++|+++ | .+..+|.....+++|++|+++ +|.+..++ .+..+
T Consensus 39 ~l~~sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N-~i~~i~~~~~~~~~L~~L~l~-~N~i~~l~-~~~~l 114 (198)
T d1m9la_ 39 KMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRN-LIKKIENLDAVADTLEELWIS-YNQIASLS-GIEKL 114 (198)
T ss_dssp CCHHHHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEE-EECSCSSHHHHHHHCCEEECS-EEECCCHH-HHHHH
T ss_pred hhhhHHhcccccceeECcccCCCCcc-cccCCccccChhhccc-ccccccccccccccccccccc-cccccccc-ccccc
Confidence 33344444444444444444444443 34444444444444 4 444444333333344444444 44333321 23333
Q ss_pred CcCceeCccccC-CC--cchhcCCCCCCCeEEEeecC
Q 037494 265 KNLIFISALHPS-SC--TPDILSRLPTVQTLRISGDL 298 (394)
Q Consensus 265 ~~L~~L~~~~~~-~~--~~~~l~~l~~L~~L~l~~~~ 298 (394)
++|++|++.++. .. ....+..+++|+.|++++|+
T Consensus 115 ~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 115 VNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp HHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred ccccccccccchhccccccccccCCCccceeecCCCc
Confidence 444444444333 11 11345556666666666654
No 30
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}
Probab=99.06 E-value=1.9e-12 Score=108.45 Aligned_cols=108 Identities=17% Similarity=0.092 Sum_probs=87.8
Q ss_pred hHHhccCCceeEEEcCCCCCCCCcccccCcccccEEecCCCCCccccccccCCCCCcEEEcc-cCCccccchhhccCccC
Q 037494 165 ENFCENFKYLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIPTLKCLPLLICTLLNLETLEMP-AGYIDHSPEGIWMMQKL 243 (394)
Q Consensus 165 ~~~~~~l~~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~~l~~lp~~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L 243 (394)
+.-+..+++|+.|++++|.++.++ .+..+++|++|++++|.++.+|.....+++|++|+++ | .+..++ .+..+++|
T Consensus 41 ~~sl~~L~~L~~L~Ls~n~I~~i~-~l~~l~~L~~L~Ls~N~i~~i~~~~~~~~~L~~L~l~~N-~i~~l~-~~~~l~~L 117 (198)
T d1m9la_ 41 DATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYN-QIASLS-GIEKLVNL 117 (198)
T ss_dssp HHHHHHTTTCCEEECSEEEESCCC-CHHHHTTCCEEECCEEEECSCSSHHHHHHHCCEEECSEE-ECCCHH-HHHHHHHS
T ss_pred hhHHhcccccceeECcccCCCCcc-cccCCccccChhhcccccccccccccccccccccccccc-cccccc-cccccccc
Confidence 333488899999999999988875 4888899999999999888888655556789999999 8 888775 47888999
Q ss_pred cEEEeeCCCCCCCCC--CCCCCCCcCceeCccccC
Q 037494 244 MHLNFDSITLPAPPK--NYSSSLKNLIFISALHPS 276 (394)
Q Consensus 244 ~~L~l~~~~~~~~~p--~~l~~l~~L~~L~~~~~~ 276 (394)
+.|+++ +|.+..++ ..++.+++|+.|.+.++.
T Consensus 118 ~~L~L~-~N~i~~~~~~~~l~~l~~L~~L~L~~N~ 151 (198)
T d1m9la_ 118 RVLYMS-NNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp SEEEES-EEECCCHHHHHHHTTTTTCSEEEECSSH
T ss_pred cccccc-cchhccccccccccCCCccceeecCCCc
Confidence 999999 88877665 357888999999988775
No 31
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.95 E-value=7.4e-11 Score=107.52 Aligned_cols=233 Identities=14% Similarity=0.054 Sum_probs=138.2
Q ss_pred CCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCCC-----------cccccCcccccEEecCCCCCcc
Q 037494 141 QSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQF-----------PPGLENLFLLKYLQLNIPTLKC 209 (394)
Q Consensus 141 ~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~l-----------p~~i~~l~~L~~L~l~~~~l~~ 209 (394)
.....++.|.+.++....-....+...+...+.|+.++++++..... ...+...++|+.|++++|.+..
T Consensus 28 ~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 107 (344)
T d2ca6a1 28 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 107 (344)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccccccc
Confidence 34566777777766543211112233346677777887776654321 2334456778888887776543
Q ss_pred -----ccccccCCCCCcEEEcc-cCCcccc-----ch---------hhccCccCcEEEeeCCCCCCC-----CCCCCCCC
Q 037494 210 -----LPLLICTLLNLETLEMP-AGYIDHS-----PE---------GIWMMQKLMHLNFDSITLPAP-----PKNYSSSL 264 (394)
Q Consensus 210 -----lp~~l~~l~~L~~L~l~-~~~l~~l-----p~---------~i~~l~~L~~L~l~~~~~~~~-----~p~~l~~l 264 (394)
+...+...++|++|+++ | .+..- .. .....+.|+.+.++ ++.... +...+...
T Consensus 108 ~~~~~l~~~l~~~~~L~~L~l~~n-~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~-~n~i~~~~~~~l~~~l~~~ 185 (344)
T d2ca6a1 108 TAQEPLIDFLSKHTPLEHLYLHNN-GLGPQAGAKIARALQELAVNKKAKNAPPLRSIICG-RNRLENGSMKEWAKTFQSH 185 (344)
T ss_dssp TTHHHHHHHHHHCTTCCEEECCSS-CCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECC-SSCCTGGGHHHHHHHHHHC
T ss_pred ccccchhhhhcccccchheecccc-cccccccccccccccccccccccccCcccceeecc-cccccccccccccchhhhh
Confidence 33445556778888887 6 43210 00 11245677788777 654321 11123445
Q ss_pred CcCceeCccccCCC-------cchhcCCCCCCCeEEEeecC--CccccchhhhhcCCCCCcEEEecCCCCCCccC----C
Q 037494 265 KNLIFISALHPSSC-------TPDILSRLPTVQTLRISGDL--SHYHSGVSKSLCELHKLECLKLVNGSKLSRMV----L 331 (394)
Q Consensus 265 ~~L~~L~~~~~~~~-------~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~~l~~~~~L~~L~l~~~~~L~~L~----p 331 (394)
+.|++|.+..+... ....+...++|+.|++++|. ......+...+...++|++|++++| .+..-. -
T Consensus 186 ~~L~~L~L~~n~i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~i~~~g~~~L~~~l~~~~~L~~L~Ls~n-~i~~~g~~~l~ 264 (344)
T d2ca6a1 186 RLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDC-LLSARGAAAVV 264 (344)
T ss_dssp TTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTC-CCCHHHHHHHH
T ss_pred hhhcccccccccccccccccchhhhhcchhhhcccccccccccccccccccccccccccchhhhhhcC-ccCchhhHHHH
Confidence 67788877776611 22346677889999998886 1112335567778899999999884 233210 0
Q ss_pred -CC--CCCCCCceEEEEecccCCCCCccc----c-cCCCCCCeEEEecccccCc
Q 037494 332 -SE--YQFPPSLIQLSLSNTELMEDPMPM----L-ERLPRLQVMKLKRNSYFGR 377 (394)
Q Consensus 332 -~~--~~~l~~L~~L~L~~~~l~~~~~~~----l-~~l~~L~~L~l~~n~~~~~ 377 (394)
.+ .. .++|++|+|++|++....... + .++++|++|++++|.+...
T Consensus 265 ~~l~~~~-~~~L~~L~ls~N~i~~~~~~~l~~~l~~~~~~L~~L~l~~N~~~~~ 317 (344)
T d2ca6a1 265 DAFSKLE-NIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 317 (344)
T ss_dssp HHHHTCS-SCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHhhhcc-CCCCCEEECCCCcCChHHHHHHHHHHHccCCCCCEEECCCCcCCCc
Confidence 11 11 467999999999875443332 3 2578999999988887653
No 32
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.86 E-value=1.9e-10 Score=108.14 Aligned_cols=107 Identities=17% Similarity=0.032 Sum_probs=77.2
Q ss_pred ceEEEEEEeCCcchhhc---cCCCCCccEEEEecCCCccchhcchhHHhccCCceeEEEcCCCCCCC-----Cccccc-C
Q 037494 123 TVKRCFILEDLIEFISL---EQSDMYLQSFLNHSSESDHLALIDCENFCENFKYLRVLNWGSAVLDQ-----FPPGLE-N 193 (394)
Q Consensus 123 ~~r~L~l~~~~~~~~~~---~~~~~~lr~L~l~~~~~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~~-----lp~~i~-~ 193 (394)
+++.|.+..+...+... ...++++++|.+.+|.........+...+..+++|+.|++++|.+.. +...+. .
T Consensus 3 ~l~~ld~~~~~i~~~~~~~l~~~l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~~~~~~~l~~~l~~~ 82 (460)
T d1z7xw1 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTP 82 (460)
T ss_dssp EEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCST
T ss_pred CCCEEEeeCCcCChHHHHHHHHhCCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCChHHHHHHHHHHhcC
Confidence 56778888666655322 26688999999999987532223344555899999999999998752 223332 2
Q ss_pred cccccEEecCCCCCcc-----ccccccCCCCCcEEEcc-cCCc
Q 037494 194 LFLLKYLQLNIPTLKC-----LPLLICTLLNLETLEMP-AGYI 230 (394)
Q Consensus 194 l~~L~~L~l~~~~l~~-----lp~~l~~l~~L~~L~l~-~~~l 230 (394)
..+|+.|++++|.++. ++..+..+++|++|+++ | .+
T Consensus 83 ~~~L~~L~L~~n~it~~~~~~l~~~l~~~~~L~~L~L~~N-~i 124 (460)
T d1z7xw1 83 SCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDN-LL 124 (460)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSS-BC
T ss_pred CCCCCEEECCCCCccccccccccchhhccccccccccccc-cc
Confidence 3479999999998863 45667889999999998 7 54
No 33
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.85 E-value=5.1e-09 Score=83.54 Aligned_cols=102 Identities=14% Similarity=-0.029 Sum_probs=67.2
Q ss_pred ceeEEEcCCCCCCCCcccccCcccccEEecCCC-CCccccc-cccCCCCCcEEEcc-cCCccccch-hhccCccCcEEEe
Q 037494 173 YLRVLNWGSAVLDQFPPGLENLFLLKYLQLNIP-TLKCLPL-LICTLLNLETLEMP-AGYIDHSPE-GIWMMQKLMHLNF 248 (394)
Q Consensus 173 ~L~~L~l~~~~~~~lp~~i~~l~~L~~L~l~~~-~l~~lp~-~l~~l~~L~~L~l~-~~~l~~lp~-~i~~l~~L~~L~l 248 (394)
...+++.+++++.+.|..+..+++|+.|+++++ .++.++. .+.++++|+.|+++ | .+..+++ .+..+++|++|++
T Consensus 9 ~~~~l~c~~~~~~~~p~~l~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~i~~~~f~~l~~L~~L~L 87 (156)
T d2ifga3 9 GSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS-GLRFVAPDAFHFTPRLSRLNL 87 (156)
T ss_dssp SSSCEECCSSCCCTTTTTSCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSS-CCCEECTTGGGSCSCCCEEEC
T ss_pred CCCeEEecCCCCccCcccccCccccCeeecCCCccccccCchhhccccccCcceeecc-ccCCcccccccccccccceec
Confidence 344566667666667777777777777777654 4776654 36677777777777 6 7777754 4667777777777
Q ss_pred eCCCCCCCCCCCCCCCCcCceeCccccC
Q 037494 249 DSITLPAPPKNYSSSLKNLIFISALHPS 276 (394)
Q Consensus 249 ~~~~~~~~~p~~l~~l~~L~~L~~~~~~ 276 (394)
+ +|.+..+|.++-...+|+.|++.++.
T Consensus 88 s-~N~l~~l~~~~~~~~~l~~L~L~~Np 114 (156)
T d2ifga3 88 S-FNALESLSWKTVQGLSLQELVLSGNP 114 (156)
T ss_dssp C-SSCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred c-CCCCcccChhhhccccccccccCCCc
Confidence 7 77777776654443455555555443
No 34
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.77 E-value=1.1e-08 Score=81.66 Aligned_cols=84 Identities=14% Similarity=0.040 Sum_probs=69.9
Q ss_pred ccCCceeEEEcCCCC-CCCCc-ccccCcccccEEecCCCCCccccc-cccCCCCCcEEEcc-cCCccccchhhccCccCc
Q 037494 169 ENFKYLRVLNWGSAV-LDQFP-PGLENLFLLKYLQLNIPTLKCLPL-LICTLLNLETLEMP-AGYIDHSPEGIWMMQKLM 244 (394)
Q Consensus 169 ~~l~~L~~L~l~~~~-~~~lp-~~i~~l~~L~~L~l~~~~l~~lp~-~l~~l~~L~~L~l~-~~~l~~lp~~i~~l~~L~ 244 (394)
..+++|+.|+++++. ++.++ +.+..+++|+.|++++|.|+.+++ .+..+++|++|+|+ | .+..+|.++....+|+
T Consensus 28 ~~l~~l~~L~l~~n~~l~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~Ls~N-~l~~l~~~~~~~~~l~ 106 (156)
T d2ifga3 28 PGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN-ALESLSWKTVQGLSLQ 106 (156)
T ss_dssp CSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS-CCSCCCSTTTCSCCCC
T ss_pred cCccccCeeecCCCccccccCchhhccccccCcceeeccccCCcccccccccccccceeccCC-CCcccChhhhcccccc
Confidence 778889999997664 88776 568889999999999999998854 47789999999999 8 8899988777777899
Q ss_pred EEEeeCCCCC
Q 037494 245 HLNFDSITLP 254 (394)
Q Consensus 245 ~L~l~~~~~~ 254 (394)
+|+++ +|+.
T Consensus 107 ~L~L~-~Np~ 115 (156)
T d2ifga3 107 ELVLS-GNPL 115 (156)
T ss_dssp EEECC-SSCC
T ss_pred ccccC-CCcc
Confidence 99998 7763
No 35
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=98.77 E-value=2.4e-10 Score=103.97 Aligned_cols=204 Identities=12% Similarity=0.050 Sum_probs=141.2
Q ss_pred hHHhccCCceeEEEcCCCCCC-----CCcccccCcccccEEecCCCCCcc-----------ccccccCCCCCcEEEcc-c
Q 037494 165 ENFCENFKYLRVLNWGSAVLD-----QFPPGLENLFLLKYLQLNIPTLKC-----------LPLLICTLLNLETLEMP-A 227 (394)
Q Consensus 165 ~~~~~~l~~L~~L~l~~~~~~-----~lp~~i~~l~~L~~L~l~~~~l~~-----------lp~~l~~l~~L~~L~l~-~ 227 (394)
..+ .....|+.|++++|.+. .+...+...++|+.++++++.... +...+...++|+.|+++ |
T Consensus 25 ~~L-~~~~~l~~L~Ls~n~i~~~~~~~l~~~l~~~~~L~~l~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~L~~L~L~~n 103 (344)
T d2ca6a1 25 AVL-LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDN 103 (344)
T ss_dssp HHH-HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSC
T ss_pred HHH-hhCCCCCEEECcCCcCCHHHHHHHHHHHHhCCCCCEEECCCCcccccccccchHHHHHHHHHhhCCCccccccccc
Confidence 344 78899999999999875 344567788999999998765432 22335678899999999 7
Q ss_pred CCccc-----cchhhccCccCcEEEeeCCCCCCCC-----CCC---------CCCCCcCceeCccccC------CCcchh
Q 037494 228 GYIDH-----SPEGIWMMQKLMHLNFDSITLPAPP-----KNY---------SSSLKNLIFISALHPS------SCTPDI 282 (394)
Q Consensus 228 ~~l~~-----lp~~i~~l~~L~~L~l~~~~~~~~~-----p~~---------l~~l~~L~~L~~~~~~------~~~~~~ 282 (394)
.+.. +...+...++|++|+++ +|..... ... ....+.|+.+.+..+. ......
T Consensus 104 -~i~~~~~~~l~~~l~~~~~L~~L~l~-~n~l~~~~~~~l~~~l~~~~~~~~~~~~~~L~~l~l~~n~i~~~~~~~l~~~ 181 (344)
T d2ca6a1 104 -AFGPTAQEPLIDFLSKHTPLEHLYLH-NNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKT 181 (344)
T ss_dssp -CCCTTTHHHHHHHHHHCTTCCEEECC-SSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHH
T ss_pred -ccccccccchhhhhcccccchheecc-cccccccccccccccccccccccccccCcccceeecccccccccccccccch
Confidence 5543 44556678999999999 8763210 000 1234567778776655 123334
Q ss_pred cCCCCCCCeEEEeecCCcccc-----chhhhhcCCCCCcEEEecCCCCCC-----ccCC-CCCCCCCCceEEEEecccCC
Q 037494 283 LSRLPTVQTLRISGDLSHYHS-----GVSKSLCELHKLECLKLVNGSKLS-----RMVL-SEYQFPPSLIQLSLSNTELM 351 (394)
Q Consensus 283 l~~l~~L~~L~l~~~~~~~~~-----~~~~~l~~~~~L~~L~l~~~~~L~-----~L~p-~~~~~l~~L~~L~L~~~~l~ 351 (394)
+...+.|+.|++++|. ... .+...+...++|+.|++++++ +. .+ . .+.. .++|++|+|++|.+.
T Consensus 182 l~~~~~L~~L~L~~n~--i~~~g~~~~l~~~l~~~~~L~~L~Ls~N~-i~~~g~~~L-~~~l~~-~~~L~~L~Ls~n~i~ 256 (344)
T d2ca6a1 182 FQSHRLLHTVKMVQNG--IRPEGIEHLLLEGLAYCQELKVLDLQDNT-FTHLGSSAL-AIALKS-WPNLRELGLNDCLLS 256 (344)
T ss_dssp HHHCTTCCEEECCSSC--CCHHHHHHHHHTTGGGCTTCCEEECCSSC-CHHHHHHHH-HHHGGG-CTTCCEEECTTCCCC
T ss_pred hhhhhhhccccccccc--ccccccccchhhhhcchhhhccccccccc-ccccccccc-cccccc-cccchhhhhhcCccC
Confidence 5667899999999986 322 234557788999999999742 22 22 3 4555 789999999999986
Q ss_pred CCCcccc----cC--CCCCCeEEEecccccC
Q 037494 352 EDPMPML----ER--LPRLQVMKLKRNSYFG 376 (394)
Q Consensus 352 ~~~~~~l----~~--l~~L~~L~l~~n~~~~ 376 (394)
......+ .. .+.|++|++++|.+..
T Consensus 257 ~~g~~~l~~~l~~~~~~~L~~L~ls~N~i~~ 287 (344)
T d2ca6a1 257 ARGAAAVVDAFSKLENIGLQTLRLQYNEIEL 287 (344)
T ss_dssp HHHHHHHHHHHHTCSSCCCCEEECCSSCCBH
T ss_pred chhhHHHHHHhhhccCCCCCEEECCCCcCCh
Confidence 5444333 22 4679999999998654
No 36
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.60 E-value=3.9e-09 Score=98.99 Aligned_cols=85 Identities=15% Similarity=0.044 Sum_probs=59.3
Q ss_pred CCceEEEEEEeCCcchh-----hcc-CCCCCccEEEEecCCCccchhcchhHHh---c-cCCceeEEEcCCCCCCC----
Q 037494 121 LATVKRCFILEDLIEFI-----SLE-QSDMYLQSFLNHSSESDHLALIDCENFC---E-NFKYLRVLNWGSAVLDQ---- 186 (394)
Q Consensus 121 ~~~~r~L~l~~~~~~~~-----~~~-~~~~~lr~L~l~~~~~~~~~~~~l~~~~---~-~l~~L~~L~l~~~~~~~---- 186 (394)
.++++.+.+..+...+. ... ...++|+.|.+.++... +..+..+. . ....|++|++++|.++.
T Consensus 26 l~~l~~L~L~~~~i~~~~~~~l~~~L~~~~~L~~LdLs~N~i~---~~~~~~l~~~l~~~~~~L~~L~L~~n~it~~~~~ 102 (460)
T d1z7xw1 26 LQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELG---DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 102 (460)
T ss_dssp HTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCH---HHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred CCCCCEEEeCCCCCCHHHHHHHHHHHhcCCCCCEEECcCCcCC---hHHHHHHHHHHhcCCCCCCEEECCCCCccccccc
Confidence 45678888985544321 111 57889999999988764 22222221 2 23579999999999863
Q ss_pred -CcccccCcccccEEecCCCCCc
Q 037494 187 -FPPGLENLFLLKYLQLNIPTLK 208 (394)
Q Consensus 187 -lp~~i~~l~~L~~L~l~~~~l~ 208 (394)
++..+..+++|++|++++|.+.
T Consensus 103 ~l~~~l~~~~~L~~L~L~~N~i~ 125 (460)
T d1z7xw1 103 VLSSTLRTLPTLQELHLSDNLLG 125 (460)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCH
T ss_pred cccchhhccccccccccccccch
Confidence 4567788999999999998764
No 37
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.70 E-value=3.4e-06 Score=67.07 Aligned_cols=83 Identities=24% Similarity=0.105 Sum_probs=56.9
Q ss_pred hHHhccCCceeEEEcCCCCCCCCc---ccccCcccccEEecCCCCCcccccc-ccCCCCCcEEEcc-cCCccccch----
Q 037494 165 ENFCENFKYLRVLNWGSAVLDQFP---PGLENLFLLKYLQLNIPTLKCLPLL-ICTLLNLETLEMP-AGYIDHSPE---- 235 (394)
Q Consensus 165 ~~~~~~l~~L~~L~l~~~~~~~lp---~~i~~l~~L~~L~l~~~~l~~lp~~-l~~l~~L~~L~l~-~~~l~~lp~---- 235 (394)
+.++..++.|++|++++|.++.++ ..+..+++|++|++++|.++.+++- .....+|+.|+++ | .+.....
T Consensus 58 ~~~~~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N~i~~l~~l~~l~~~~L~~L~L~~N-pl~~~~~~~~~ 136 (162)
T d1koha1 58 RIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGN-SLSDTFRDQST 136 (162)
T ss_dssp HHHHHHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTSCCCCGGGHHHHTTCCCSSCCCTTS-TTSSSSSSHHH
T ss_pred HHHHHhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccCccccchhhhhhhccccceeecCCC-CcCcCcccchh
Confidence 445567889999999999988653 4466788889999999888877641 1233467778887 6 5543221
Q ss_pred ----hhccCccCcEEEe
Q 037494 236 ----GIWMMQKLMHLNF 248 (394)
Q Consensus 236 ----~i~~l~~L~~L~l 248 (394)
.+..+|+|+.||-
T Consensus 137 y~~~i~~~~P~L~~LDg 153 (162)
T d1koha1 137 YISAIRERFPKLLRLDG 153 (162)
T ss_dssp HHHHHHTTSTTCCEETT
T ss_pred HHHHHHHHCCCCCEECc
Confidence 2446778887763
No 38
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo sapiens) [TaxId: 9606]}
Probab=97.62 E-value=5.8e-07 Score=71.74 Aligned_cols=80 Identities=20% Similarity=0.110 Sum_probs=51.0
Q ss_pred cCcccccEEecCCCCCcccc---ccccCCCCCcEEEcc-cCCccccch-hhccCccCcEEEeeCCCCCCCCCCC------
Q 037494 192 ENLFLLKYLQLNIPTLKCLP---LLICTLLNLETLEMP-AGYIDHSPE-GIWMMQKLMHLNFDSITLPAPPKNY------ 260 (394)
Q Consensus 192 ~~l~~L~~L~l~~~~l~~lp---~~l~~l~~L~~L~l~-~~~l~~lp~-~i~~l~~L~~L~l~~~~~~~~~p~~------ 260 (394)
..+++|++|++++|.|+.++ ..+..+++|+.|+++ | .+..+++ ......+|+.|++. +|++......
T Consensus 62 ~~~~~L~~L~Ls~N~i~~l~~~~~~~~~l~~L~~L~Ls~N-~i~~l~~l~~l~~~~L~~L~L~-~Npl~~~~~~~~~y~~ 139 (162)
T d1koha1 62 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGN-ELKSERELDKIKGLKLEELWLD-GNSLSDTFRDQSTYIS 139 (162)
T ss_dssp HHCTTCCCCCCCSSCCCCCSGGGTHHHHSTTCCCCCCTTS-CCCCGGGHHHHTTCCCSSCCCT-TSTTSSSSSSHHHHHH
T ss_pred HhCCCCCEeeCCCccccCCchhHHHHhhCCcccccccccC-ccccchhhhhhhccccceeecC-CCCcCcCcccchhHHH
Confidence 45777888888888777653 335567788888888 7 7777764 22344567778887 7764433221
Q ss_pred --CCCCCcCceeCcc
Q 037494 261 --SSSLKNLIFISAL 273 (394)
Q Consensus 261 --l~~l~~L~~L~~~ 273 (394)
+..+++|+.|+..
T Consensus 140 ~i~~~~P~L~~LDg~ 154 (162)
T d1koha1 140 AIRERFPKLLRLDGH 154 (162)
T ss_dssp HHHTTSTTCCEETTE
T ss_pred HHHHHCCCCCEECcC
Confidence 3456666666543
No 39
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=96.82 E-value=0.00077 Score=53.12 Aligned_cols=107 Identities=10% Similarity=0.001 Sum_probs=54.5
Q ss_pred CCCCccEEEEecCC-CccchhcchhHHhccCCceeEEEcCCCCCC-----CCcccccCcccccEEecCCCCCcc-----c
Q 037494 142 SDMYLQSFLNHSSE-SDHLALIDCENFCENFKYLRVLNWGSAVLD-----QFPPGLENLFLLKYLQLNIPTLKC-----L 210 (394)
Q Consensus 142 ~~~~lr~L~l~~~~-~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~-----~lp~~i~~l~~L~~L~l~~~~l~~-----l 210 (394)
..+.|+.|.+.++. ...-....+-..+...+.|+.|++++|.+. .+...+...+.|+.|++++|.+.. +
T Consensus 13 n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n~i~~~g~~~l 92 (167)
T d1pgva_ 13 DDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARL 92 (167)
T ss_dssp TCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHH
T ss_pred CCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehhhcchHHHHHH
Confidence 34567777776532 221001122222256666777777777654 222344445667777777666542 2
Q ss_pred cccccCCCCCcEEEcc-cCCccc--------cchhhccCccCcEEEee
Q 037494 211 PLLICTLLNLETLEMP-AGYIDH--------SPEGIWMMQKLMHLNFD 249 (394)
Q Consensus 211 p~~l~~l~~L~~L~l~-~~~l~~--------lp~~i~~l~~L~~L~l~ 249 (394)
-..+..-+.|++|+++ + .... +...+..-++|+.|+++
T Consensus 93 ~~aL~~n~sL~~L~l~~n-~~~~~g~~~~~~l~~~L~~n~sL~~l~l~ 139 (167)
T d1pgva_ 93 LRSTLVTQSIVEFKADNQ-RQSVLGNQVEMDMMMAIEENESLLRVGIS 139 (167)
T ss_dssp HHHTTTTCCCSEEECCCC-SSCCCCHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHhCCcCCEEECCCC-cCCCccHHHHHHHHHHHHhCCCccEeeCc
Confidence 2345555666666666 4 2222 22333445566666655
No 40
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=96.43 E-value=0.0019 Score=50.68 Aligned_cols=109 Identities=12% Similarity=0.079 Sum_probs=64.0
Q ss_pred CCCCCccEEEEecCC-CccchhcchhHHhccCCceeEEEcCCCCCC-----CCcccccCcccccEEecCCCCCc-----c
Q 037494 141 QSDMYLQSFLNHSSE-SDHLALIDCENFCENFKYLRVLNWGSAVLD-----QFPPGLENLFLLKYLQLNIPTLK-----C 209 (394)
Q Consensus 141 ~~~~~lr~L~l~~~~-~~~~~~~~l~~~~~~l~~L~~L~l~~~~~~-----~lp~~i~~l~~L~~L~l~~~~l~-----~ 209 (394)
...+.|+.|.+.+.. ...-....+-..+...++|+.|++++|.+. .+-..+...+.++.++++++.+. .
T Consensus 14 ~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~~~~~~g~~~ 93 (166)
T d1io0a_ 14 NNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILA 93 (166)
T ss_dssp TTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHH
T ss_pred hcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccccccchhHHH
Confidence 345677777776633 321111122222367778888888888765 22344555677888888777654 3
Q ss_pred ccccccCCCCCcEEEcc-cC-Ccc-----ccchhhccCccCcEEEee
Q 037494 210 LPLLICTLLNLETLEMP-AG-YID-----HSPEGIWMMQKLMHLNFD 249 (394)
Q Consensus 210 lp~~l~~l~~L~~L~l~-~~-~l~-----~lp~~i~~l~~L~~L~l~ 249 (394)
+-..+...++|+.++|. +. .+. .+...+...++|++|+++
T Consensus 94 l~~~l~~~~~L~~l~L~l~~n~i~~~~~~~La~~L~~n~~L~~L~l~ 140 (166)
T d1io0a_ 94 LVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYH 140 (166)
T ss_dssp HHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECC
T ss_pred HHHHHHhCccccEEeeccCCCcCcHHHHHHHHHHHHhCCCcCEEeCc
Confidence 33556667777776665 31 332 234445567777777776
No 41
>d1pgva_ c.10.1.1 (A:) Tropomodulin C-terminal domain {nematode (Caenorhabditis elegans) [TaxId: 6239]}
Probab=95.98 E-value=0.0035 Score=49.14 Aligned_cols=87 Identities=15% Similarity=0.122 Sum_probs=58.4
Q ss_pred hHHhccCCceeEEEcCCCC-CC-----CCcccccCcccccEEecCCCCCc-----cccccccCCCCCcEEEcc-cCCccc
Q 037494 165 ENFCENFKYLRVLNWGSAV-LD-----QFPPGLENLFLLKYLQLNIPTLK-----CLPLLICTLLNLETLEMP-AGYIDH 232 (394)
Q Consensus 165 ~~~~~~l~~L~~L~l~~~~-~~-----~lp~~i~~l~~L~~L~l~~~~l~-----~lp~~l~~l~~L~~L~l~-~~~l~~ 232 (394)
..+..+.+.|+.|+++++. +. .+-..+...++|+.|++++|.+. .+...+...+.|++|+++ | .+..
T Consensus 8 ~~l~~n~~~L~~L~L~~~~~i~~~~~~~l~~~L~~n~~L~~L~Ls~n~l~~~~~~~la~~L~~n~~L~~L~L~~n-~i~~ 86 (167)
T d1pgva_ 8 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESN-FLTP 86 (167)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSS-BCCH
T ss_pred HHHHhCCCCCcEEEeCCCCCCCHHHHHHHHHHHhhCCccceeeccccccchhHHHHHhhhhhhcccccceeeehh-hcch
Confidence 4454667899999998754 55 23355667788999999998775 223345556778888888 7 5543
Q ss_pred -----cchhhccCccCcEEEeeCCCC
Q 037494 233 -----SPEGIWMMQKLMHLNFDSITL 253 (394)
Q Consensus 233 -----lp~~i~~l~~L~~L~l~~~~~ 253 (394)
+-..+..-++|++|+++ ++.
T Consensus 87 ~g~~~l~~aL~~n~sL~~L~l~-~n~ 111 (167)
T d1pgva_ 87 ELLARLLRSTLVTQSIVEFKAD-NQR 111 (167)
T ss_dssp HHHHHHHHHTTTTCCCSEEECC-CCS
T ss_pred HHHHHHHHHHHhCCcCCEEECC-CCc
Confidence 23345556777777777 554
No 42
>d1io0a_ c.10.1.1 (A:) Tropomodulin C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=93.97 E-value=0.023 Score=43.99 Aligned_cols=84 Identities=15% Similarity=0.140 Sum_probs=52.4
Q ss_pred hHHhccCCceeEEEcCCC-CCC-----CCcccccCcccccEEecCCCCCcc-----ccccccCCCCCcEEEcc-cCCcc-
Q 037494 165 ENFCENFKYLRVLNWGSA-VLD-----QFPPGLENLFLLKYLQLNIPTLKC-----LPLLICTLLNLETLEMP-AGYID- 231 (394)
Q Consensus 165 ~~~~~~l~~L~~L~l~~~-~~~-----~lp~~i~~l~~L~~L~l~~~~l~~-----lp~~l~~l~~L~~L~l~-~~~l~- 231 (394)
..+..+.+.|+.|+++++ .++ .+-.++...++|+.|++++|.+.. +-..+.....++.++++ | .+.
T Consensus 10 ~~~~~~~~~L~~L~L~~~~~i~~~~~~~l~~al~~n~~L~~L~Ls~n~l~~~~~~~L~~~l~~~~~l~~l~l~~~-~~~~ 88 (166)
T d1io0a_ 10 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESN-FISG 88 (166)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSS-CCCH
T ss_pred HHHHhcCCCCcEEEcCCCCCCCHHHHHHHHHHHhcCCccCeeeccCCcccHHHHHHHHHHHhhcccchhhhhccc-cccc
Confidence 445467788999999874 354 234556677888888888887652 22334556677777777 5 432
Q ss_pred ----ccchhhccCccCcEEEee
Q 037494 232 ----HSPEGIWMMQKLMHLNFD 249 (394)
Q Consensus 232 ----~lp~~i~~l~~L~~L~l~ 249 (394)
.+...+...++|+.++++
T Consensus 89 ~g~~~l~~~l~~~~~L~~l~L~ 110 (166)
T d1io0a_ 89 SGILALVEALQSNTSLIELRID 110 (166)
T ss_dssp HHHHHHHHGGGGCSSCCEEECC
T ss_pred hhHHHHHHHHHhCccccEEeec
Confidence 223345555666665554
Done!