BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037497
PRGTYIMLASISARSLTISSLFLSSSSPKYGRCKSRNLMSETESWNKTKARSMSLKVSNS
SSKDDVQVGERLYLGMDFGTSGARFAIINKDGTILSEGKKEYPKFTTEESIDWLRSWKVT
LFSLLEAVPVNLRPLIASISIDGTSATTIIIDSNSGEPLWRPFLYNESCPDALPVVKSIA
PANHTVCSGTSTLCKLVSWWNTEGENRESALLLHQADWLLWLLHGKLGLSDYNNALKVGY
DPELESYPPWLLSQPYSQLLPSVQAPGTSIGYLKEGIRTEFGMFLFHLTCHWWKPTEHQT
IVFLCICIVINNKFSQISCSSDCRTGNLGDIFC

High Scoring Gene Products

Symbol, full name Information P value
XK-1
AT2G21370 		protein from Arabidopsis thaliana 6.7e-65

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037497
        (333 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2050029 - symbol:XK-1 "AT2G21370" species:3702...   661  6.7e-65   1


>TAIR|locus:2050029 [details] [associations]
            symbol:XK-1 "AT2G21370" species:3702 "Arabidopsis
            thaliana" [GO:0004856 "xylulokinase activity" evidence=ISS;IDA]
            [GO:0005975 "carbohydrate metabolic process" evidence=IEA]
            [GO:0016773 "phosphotransferase activity, alcohol group as
            acceptor" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0009536 "plastid" evidence=IDA] [GO:0009507 "chloroplast"
            evidence=IDA] InterPro:IPR018484 InterPro:IPR018485 Pfam:PF00370
            Pfam:PF02782 GO:GO:0009507 EMBL:CP002685 GO:GO:0005975
            GO:GO:0016301 GO:GO:0016773 EMBL:AY136397 EMBL:BT000210
            EMBL:AK175657 IPI:IPI00527637 RefSeq:NP_179732.2 UniGene:At.27499
            ProteinModelPortal:Q8L794 SMR:Q8L794 STRING:Q8L794 PRIDE:Q8L794
            EnsemblPlants:AT2G21370.1 GeneID:816675 KEGG:ath:AT2G21370
            TAIR:At2g21370 HOGENOM:HOG000222137 InParanoid:Q8L794 OMA:CGGASNA
            PhylomeDB:Q8L794 ProtClustDB:CLSN2690839 Genevestigator:Q8L794
            Uniprot:Q8L794
        Length = 478

 Score = 661 (237.7 bits), Expect = 6.7e-65, P = 6.7e-65
 Identities = 129/213 (60%), Positives = 149/213 (69%)

Query:    70 ERLYLGMDFGTSGARFAIINKDGTILSEGKKEYPKFTTEESIDWLRSWKVTLFSLLEAVP 129
             E+LYLGMDFGTSG RF +I++ G I ++GK+EYP F  EES+ W  SWK TLFSLLE +P
Sbjct:    53 EKLYLGMDFGTSGGRFTVIDEQGEIKAQGKREYPPFMKEESMGWASSWKATLFSLLEDIP 112

Query:   130 VNLRPLIASISIDGTSATTIIIDSNSGEPLWRPFLYNESCPDALPVVKSIAPANHTVCSG 189
             V +R L++SIS+DGTSATT+I++S SGE L +P+LYN+SCPDALP VKSIAPANHTVCSG
Sbjct:   113 VTVRSLVSSISLDGTSATTLILNSESGEVLCQPYLYNQSCPDALPEVKSIAPANHTVCSG 172

Query:   190 TSTLCKLVSWWNTEGENRESXXXXXXXXXXXXXXXXXXXXSDYNNALKVGYDPELESYXX 249
             TSTLCKLVSWWNTE  NRES                    SDYNNALKVGYDPE ESY  
Sbjct:   173 TSTLCKLVSWWNTEVPNRESAVLLHQADWLLWLLHGRLGVSDYNNALKVGYDPESESYPS 232

Query:   250 XXXXXXXXXXXXXXXAPGTSIGYLKEGIRTEFG 282
                            APGTSIG LKE    +FG
Sbjct:   233 WLLGQPYSQLLPKVQAPGTSIGNLKESFTRQFG 265


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.134   0.426    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      333       272   0.00099  114 3  11 22  0.50    33
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  616 (65 KB)
  Total size of DFA:  230 KB (2125 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.53u 0.09s 20.62t   Elapsed:  00:00:01
  Total cpu time:  20.53u 0.09s 20.62t   Elapsed:  00:00:01
  Start:  Mon May 20 22:21:27 2013   End:  Mon May 20 22:21:28 2013

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