Query         037504
Match_columns 396
No_of_seqs    327 out of 4152
Neff          10.2
Searched_HMMs 46136
Date          Fri Mar 29 12:56:00 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037504hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 PHA02946 ankyin-like protein;  100.0 2.5E-40 5.3E-45  313.8  23.4  282    6-342    54-367 (446)
  2 KOG4412 26S proteasome regulat 100.0 2.6E-41 5.5E-46  263.0  12.3  217   23-346     3-220 (226)
  3 PHA02874 ankyrin repeat protei 100.0 2.2E-40 4.7E-45  316.5  21.2  263    3-340    13-298 (434)
  4 PHA03095 ankyrin-like protein; 100.0 5.5E-40 1.2E-44  318.0  22.6  263    4-341    27-301 (471)
  5 PHA02876 ankyrin repeat protei 100.0 2.3E-39 4.9E-44  325.9  21.6  279    2-340   156-486 (682)
  6 PHA02716 CPXV016; CPX019; EVM0 100.0 2.7E-39 5.9E-44  315.9  20.6  280    3-341   154-546 (764)
  7 PHA02876 ankyrin repeat protei 100.0 3.8E-39 8.3E-44  324.3  20.9  280    2-341    52-453 (682)
  8 KOG4412 26S proteasome regulat 100.0 4.6E-40 9.9E-45  256.0  10.1  192    7-287    19-213 (226)
  9 PHA03100 ankyrin repeat protei 100.0 4.5E-39 9.8E-44  312.2  19.5  248   17-341    29-294 (480)
 10 PHA02791 ankyrin-like protein; 100.0 1.5E-38 3.2E-43  281.7  19.1  225    5-297    13-239 (284)
 11 PHA02874 ankyrin repeat protei 100.0 1.8E-37 3.8E-42  296.4  24.0  241   25-340     3-264 (434)
 12 PHA02878 ankyrin repeat protei 100.0 6.6E-38 1.4E-42  302.7  20.9  240   20-340    34-310 (477)
 13 PHA02875 ankyrin repeat protei 100.0 7.7E-38 1.7E-42  297.6  20.8  240   23-338     2-246 (413)
 14 PHA02791 ankyrin-like protein; 100.0 8.1E-38 1.8E-42  276.9  18.7  223   33-338     9-234 (284)
 15 KOG0510 Ankyrin repeat protein 100.0 1.5E-38 3.3E-43  298.6  14.7  269    7-336   104-416 (929)
 16 PHA02716 CPXV016; CPX019; EVM0 100.0 1.3E-37 2.9E-42  304.0  21.4  276    3-297   191-559 (764)
 17 PHA02917 ankyrin-like protein; 100.0 2.6E-37 5.7E-42  303.9  23.2  299   12-339    21-494 (661)
 18 PHA03100 ankyrin repeat protei 100.0 9.8E-38 2.1E-42  302.9  19.3  246    2-297    46-302 (480)
 19 PHA02946 ankyin-like protein;  100.0 6.4E-37 1.4E-41  290.5  22.6  218   23-297    37-262 (446)
 20 KOG0510 Ankyrin repeat protein 100.0 1.8E-37 3.9E-42  291.4  16.0  281   17-341    82-388 (929)
 21 KOG0509 Ankyrin repeat and DHH 100.0 1.6E-36 3.5E-41  279.7  19.6  211   22-340    43-255 (600)
 22 PHA03095 ankyrin-like protein; 100.0 1.8E-36 3.9E-41  293.4  19.5  240    3-298    62-310 (471)
 23 PHA02989 ankyrin repeat protei 100.0 4.7E-36   1E-40  290.7  20.4  264    4-341    16-300 (494)
 24 PHA02989 ankyrin repeat protei 100.0 6.8E-35 1.5E-39  282.6  18.7  245    3-298    49-309 (494)
 25 PHA02875 ankyrin repeat protei 100.0 1.6E-34 3.4E-39  274.8  20.5  233    2-288    13-248 (413)
 26 PHA02798 ankyrin-like protein; 100.0 5.9E-35 1.3E-39  282.7  17.8  271    6-298    20-311 (489)
 27 PHA02798 ankyrin-like protein; 100.0 4.8E-35   1E-39  283.3  17.2  250   35-341    17-302 (489)
 28 PHA02878 ankyrin repeat protei 100.0 2.7E-34 5.8E-39  277.6  19.2  235    2-297    48-320 (477)
 29 PHA02730 ankyrin-like protein; 100.0 9.3E-34   2E-38  272.1  21.2  263   15-284    33-423 (672)
 30 KOG0508 Ankyrin repeat protein 100.0 2.5E-34 5.3E-39  255.0  15.0  142    2-153    95-237 (615)
 31 PHA02730 ankyrin-like protein; 100.0 6.8E-33 1.5E-37  266.1  20.5  306    2-339    55-505 (672)
 32 KOG4177 Ankyrin [Cell wall/mem 100.0 5.2E-34 1.1E-38  283.9  11.1  310    3-342   221-618 (1143)
 33 PHA02859 ankyrin repeat protei 100.0 1.2E-30 2.7E-35  223.2  18.6  176   21-289    19-203 (209)
 34 KOG4177 Ankyrin [Cell wall/mem 100.0 3.3E-32 7.2E-37  271.1   9.9  259   18-340   369-654 (1143)
 35 KOG0509 Ankyrin repeat and DHH 100.0 1.2E-31 2.6E-36  247.6  12.3  198    2-288    55-255 (600)
 36 PHA02792 ankyrin-like protein; 100.0 6.9E-31 1.5E-35  249.7  17.6  281   18-339    66-452 (631)
 37 PHA02859 ankyrin repeat protei 100.0 1.8E-30 3.9E-35  222.2  15.1  177   55-341    18-203 (209)
 38 PHA02917 ankyrin-like protein; 100.0 2.8E-29   6E-34  247.3  20.8  223   36-338    12-275 (661)
 39 PHA02795 ankyrin-like protein; 100.0 4.7E-29   1E-33  229.1  15.7  210   31-297    56-281 (437)
 40 KOG0508 Ankyrin repeat protein 100.0 1.3E-28 2.9E-33  218.7  11.4  215   29-298    10-235 (615)
 41 PHA02792 ankyrin-like protein; 100.0 1.8E-27 3.8E-32  226.6  17.3  236    2-287    83-452 (631)
 42 PLN03192 Voltage-dependent pot  99.9 2.7E-26 5.9E-31  234.3  18.6  178   55-289   522-700 (823)
 43 PHA02795 ankyrin-like protein;  99.9 3.6E-26 7.8E-31  210.2  16.9  185   29-266    83-287 (437)
 44 KOG0507 CASK-interacting adapt  99.9 1.6E-26 3.4E-31  216.5  13.1  245   25-343     5-267 (854)
 45 KOG0502 Integral membrane anky  99.9 3.9E-27 8.5E-32  189.5   7.2  237   20-335    59-296 (296)
 46 PLN03192 Voltage-dependent pot  99.9 8.1E-26 1.7E-30  230.9  17.4  192   69-339   505-698 (823)
 47 TIGR00870 trp transient-recept  99.9 1.1E-25 2.3E-30  228.7  16.5  236   20-297    14-276 (743)
 48 KOG0505 Myosin phosphatase, re  99.9   6E-25 1.3E-29  199.2  13.6  232   25-339    42-273 (527)
 49 KOG0507 CASK-interacting adapt  99.9 6.4E-25 1.4E-29  205.8  11.1  221   18-289    44-265 (854)
 50 KOG0502 Integral membrane anky  99.9 5.9E-25 1.3E-29  177.0   7.5  210   13-283    86-296 (296)
 51 KOG4369 RTK signaling protein   99.9 1.1E-24 2.5E-29  210.2   7.6  284    2-346   768-1077(2131)
 52 TIGR00870 trp transient-recept  99.9   9E-23 1.9E-27  207.4  18.6  240    3-287    29-299 (743)
 53 PHA02743 Viral ankyrin protein  99.9 1.2E-22 2.6E-27  167.4  14.1   98   47-152    10-115 (166)
 54 PHA02741 hypothetical protein;  99.9 1.5E-22 3.2E-27  167.7  13.9  130   18-155    16-156 (169)
 55 KOG0514 Ankyrin repeat protein  99.9 5.2E-23 1.1E-27  177.7   8.9  159   89-297   262-426 (452)
 56 PHA02743 Viral ankyrin protein  99.9 6.3E-22 1.4E-26  163.1  13.4  128   19-155    16-152 (166)
 57 PHA02741 hypothetical protein;  99.9 1.9E-21 4.1E-26  161.1  14.6  132   55-266    18-157 (169)
 58 KOG0514 Ankyrin repeat protein  99.9 6.9E-22 1.5E-26  170.8  10.5  163   50-263   261-429 (452)
 59 KOG4369 RTK signaling protein   99.9 1.5E-22 3.1E-27  195.9   6.6  263   20-340   754-1037(2131)
 60 PHA02736 Viral ankyrin protein  99.9 8.9E-22 1.9E-26  160.8   9.3  130   18-155    12-150 (154)
 61 PHA02736 Viral ankyrin protein  99.9 2.3E-21 4.9E-26  158.4  11.3  132   55-267    14-152 (154)
 62 PHA02884 ankyrin repeat protei  99.9 1.2E-20 2.6E-25  167.4  15.6  151   55-265    29-186 (300)
 63 KOG0512 Fetal globin-inducing   99.8 3.8E-20 8.2E-25  143.9  13.8  142   25-187    65-209 (228)
 64 KOG0512 Fetal globin-inducing   99.8 1.8E-20 3.8E-25  145.7  10.6  143   98-340    66-208 (228)
 65 PHA02884 ankyrin repeat protei  99.8   7E-20 1.5E-24  162.5  13.6  152   89-297    26-181 (300)
 66 KOG0505 Myosin phosphatase, re  99.8 3.1E-20 6.7E-25  168.8  10.9  204   16-288    66-274 (527)
 67 KOG0195 Integrin-linked kinase  99.8 3.7E-20   8E-25  155.5   4.8   66   87-155    26-91  (448)
 68 PF12796 Ank_2:  Ankyrin repeat  99.8 7.3E-18 1.6E-22  124.1  10.2   85   27-121     1-85  (89)
 69 cd00204 ANK ankyrin repeats;    99.8 2.4E-17 5.2E-22  129.4  13.4  123   20-151     4-126 (126)
 70 KOG0195 Integrin-linked kinase  99.7 2.7E-18 5.9E-23  144.3   6.7  113   17-138    28-140 (448)
 71 PF12796 Ank_2:  Ankyrin repeat  99.7 2.6E-17 5.7E-22  121.1  10.4   83   62-155     1-83  (89)
 72 KOG3676 Ca2+-permeable cation   99.7 1.9E-17   4E-22  158.0  11.2  205   24-297   102-327 (782)
 73 KOG3676 Ca2+-permeable cation   99.7 1.8E-16 3.9E-21  151.4  15.5  130   19-155   139-297 (782)
 74 cd00204 ANK ankyrin repeats;    99.7 4.4E-16 9.6E-21  122.1  13.8   93   55-154     4-96  (126)
 75 KOG4214 Myotrophin and similar  99.7 2.3E-16   5E-21  109.7   8.2  103   25-137     4-106 (117)
 76 COG0666 Arp FOG: Ankyrin repea  99.6 9.1E-15   2E-19  127.4  12.0  128   19-154    69-203 (235)
 77 KOG4214 Myotrophin and similar  99.6 8.3E-15 1.8E-19  102.0   8.5   99   60-166     4-103 (117)
 78 COG0666 Arp FOG: Ankyrin repea  99.5 1.3E-13 2.7E-18  120.1  14.5   95   55-155    70-171 (235)
 79 PF13857 Ank_5:  Ankyrin repeat  99.5 9.5E-15 2.1E-19   96.5   4.0   52  230-285     5-56  (56)
 80 PF13637 Ank_4:  Ankyrin repeat  99.5 3.5E-14 7.7E-19   93.3   6.3   54   58-115     1-54  (54)
 81 KOG0515 p53-interacting protei  99.5 5.7E-14 1.2E-18  127.5   8.9  120   26-153   553-674 (752)
 82 PF13637 Ank_4:  Ankyrin repeat  99.5 9.3E-14   2E-18   91.3   6.2   54   95-151     1-54  (54)
 83 PTZ00322 6-phosphofructo-2-kin  99.5 1.9E-13 4.1E-18  136.4  10.7  106   25-139    84-196 (664)
 84 KOG1710 MYND Zn-finger and ank  99.5 4.5E-13 9.8E-18  113.1  11.2  124   23-155    12-136 (396)
 85 PF13857 Ank_5:  Ankyrin repeat  99.4 6.6E-14 1.4E-18   92.4   3.8   47   89-138    10-56  (56)
 86 PTZ00322 6-phosphofructo-2-kin  99.4 8.9E-13 1.9E-17  131.6  10.3   87   60-153    84-170 (664)
 87 KOG0515 p53-interacting protei  99.4 1.6E-12 3.6E-17  118.1   8.2  104   61-171   553-658 (752)
 88 KOG1710 MYND Zn-finger and ank  99.4 1.5E-11 3.2E-16  104.1  12.9  112   57-187    11-123 (396)
 89 KOG0782 Predicted diacylglycer  99.0 1.7E-09 3.7E-14   99.6   8.9  122   27-155   870-991 (1004)
 90 KOG0506 Glutaminase (contains   99.0 5.3E-10 1.2E-14  100.8   5.3   92   21-117   504-595 (622)
 91 KOG0783 Uncharacterized conser  98.9 1.5E-10 3.2E-15  110.9   0.1   89  228-339    39-128 (1267)
 92 PF13606 Ank_3:  Ankyrin repeat  98.9 3.1E-09 6.6E-14   59.7   3.7   28   94-121     1-28  (30)
 93 KOG0783 Uncharacterized conser  98.8 2.3E-09   5E-14  103.0   4.7   99   34-140    28-128 (1267)
 94 PF13606 Ank_3:  Ankyrin repeat  98.8 3.4E-09 7.4E-14   59.5   3.4   27  240-266     1-27  (30)
 95 PF00023 Ank:  Ankyrin repeat H  98.8 5.8E-09 1.3E-13   60.4   3.9   33  240-276     1-33  (33)
 96 PF13962 PGG:  Domain of unknow  98.8 3.7E-09   8E-14   80.7   4.0   45  349-393     1-49  (113)
 97 KOG0506 Glutaminase (contains   98.7 1.2E-08 2.7E-13   92.2   5.0   95   55-155   503-597 (622)
 98 KOG0522 Ankyrin repeat protein  98.7 3.5E-08 7.5E-13   90.9   7.9   86   27-117    24-110 (560)
 99 KOG0818 GTPase-activating prot  98.7   4E-08 8.8E-13   89.3   8.1   85   26-115   136-220 (669)
100 KOG0818 GTPase-activating prot  98.7 7.2E-08 1.6E-12   87.7   8.8   87   61-154   136-223 (669)
101 PF00023 Ank:  Ankyrin repeat H  98.7 2.5E-08 5.5E-13   57.7   3.9   28   94-121     1-28  (33)
102 KOG0782 Predicted diacylglycer  98.7 4.2E-08 9.2E-13   90.6   6.5   99   15-117   891-989 (1004)
103 KOG0705 GTPase-activating prot  98.6 7.3E-08 1.6E-12   89.3   7.2   91   62-155   628-718 (749)
104 KOG0522 Ankyrin repeat protein  98.5 2.2E-07 4.7E-12   85.7   7.3   91   60-155    22-112 (560)
105 KOG0705 GTPase-activating prot  98.5 3.1E-07 6.7E-12   85.3   7.6   91   25-120   626-719 (749)
106 KOG3609 Receptor-activated Ca2  98.4 1.2E-06 2.6E-11   85.5   8.8  136   56-268    23-158 (822)
107 KOG3609 Receptor-activated Ca2  98.3 3.4E-06 7.5E-11   82.4   9.1  123   21-155    23-155 (822)
108 KOG0511 Ankyrin repeat protein  98.2 3.8E-06 8.3E-11   74.4   6.6   55   25-81     38-92  (516)
109 KOG0520 Uncharacterized conser  98.2 1.6E-06 3.5E-11   86.4   4.8  130   19-153   570-702 (975)
110 KOG0511 Ankyrin repeat protein  98.2 5.7E-06 1.2E-10   73.3   7.0   86   59-155    37-123 (516)
111 KOG2384 Major histocompatibili  98.1 7.5E-06 1.6E-10   65.8   5.8   65   88-155     5-70  (223)
112 KOG0520 Uncharacterized conser  98.1 2.8E-06   6E-11   84.9   3.9  132  128-304   571-706 (975)
113 KOG0521 Putative GTPase activa  98.1 2.6E-06 5.6E-11   85.4   3.7   79  239-340   654-732 (785)
114 KOG0521 Putative GTPase activa  98.1 3.9E-06 8.5E-11   84.2   5.0   89   56-151   654-742 (785)
115 KOG2384 Major histocompatibili  97.9 1.9E-05 4.1E-10   63.5   5.3   70   47-120     2-71  (223)
116 smart00248 ANK ankyrin repeats  97.1   0.001 2.2E-08   36.1   3.8   26   95-120     2-27  (30)
117 smart00248 ANK ankyrin repeats  96.8  0.0019 4.1E-08   35.0   3.5   27  240-266     1-27  (30)
118 KOG2505 Ankyrin repeat protein  96.2  0.0053 1.1E-07   57.0   3.8   66   71-139   404-471 (591)
119 KOG2505 Ankyrin repeat protein  96.0  0.0054 1.2E-07   57.0   3.1   44  239-286   428-471 (591)
120 PF06128 Shigella_OspC:  Shigel  96.0   0.047   1E-06   45.7   8.0  118   24-155   154-278 (284)
121 PF06128 Shigella_OspC:  Shigel  95.2   0.071 1.5E-06   44.7   6.6  119   99-266   157-279 (284)
122 PF03158 DUF249:  Multigene fam  93.7     2.5 5.5E-05   34.6  12.0  143   57-262    44-191 (192)
123 PF11929 DUF3447:  Domain of un  90.3    0.59 1.3E-05   32.6   4.3   20   98-117    35-54  (76)
124 PF11929 DUF3447:  Domain of un  89.0     1.2 2.7E-05   30.9   5.1   49   24-81      7-55  (76)
125 PF03158 DUF249:  Multigene fam  87.0     5.5 0.00012   32.7   8.2   45   99-152   147-191 (192)
126 cd07920 Pumilio Pumilio-family  70.2      86  0.0019   28.5  12.5  229   17-290    15-249 (322)
127 cd07920 Pumilio Pumilio-family  64.5 1.1E+02  0.0024   27.7  13.1   91   19-110    53-144 (322)
128 KOG4591 Uncharacterized conser  61.8     4.9 0.00011   33.2   1.6   51  238-288   219-270 (280)
129 KOG0513 Ca2+-independent phosp  26.6      36 0.00078   33.2   1.5   30   89-118    49-78  (503)
130 KOG4591 Uncharacterized conser  25.9      58  0.0013   27.2   2.3   53  275-341   219-271 (280)
131 PF04053 Coatomer_WDAD:  Coatom  21.8 3.1E+02  0.0068   26.5   6.8  161   27-264   268-429 (443)

No 1  
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=2.5e-40  Score=313.85  Aligned_cols=282  Identities=13%  Similarity=0.109  Sum_probs=196.6

Q ss_pred             ccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcC--CHHHHHHHHHHhh
Q 037504            6 PLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAAN--RIDFVKKLVKKMK   82 (396)
Q Consensus         6 ~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~   82 (396)
                      .+++++..+++.. ++..|.||||+|+..|+.++++.||+. |++++.+ |..|.||||+|+..+  ..+++++|++.| 
T Consensus        54 iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~-GAdin~~-d~~g~TpLh~A~~~~~~~~e~v~lLl~~G-  130 (446)
T PHA02946         54 FVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTH-GADPNAC-DKQHKTPLYYLSGTDDEVIERINLLVQYG-  130 (446)
T ss_pred             HHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCC-CCCCCCHHHHHHHcCCchHHHHHHHHHcC-
Confidence            4555665554433 466677777777777777777766653 6777666 677777777766654  356677777766 


Q ss_pred             hcccchhc-ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcC--CHHHHHHHHhhcc-cCC
Q 037504           83 AENLDLAK-RNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLG--HTEVVEFLYRETK-NSL  158 (396)
Q Consensus        83 ~~~~d~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~--~~~~v~~Ll~~~~-~~~  158 (396)
                       +++  +. .|..|.|||| |+..|+.+++++|++.|++   ++.+|..|+||||+|+..+  +.+++++|++.|+ .+.
T Consensus       131 -adi--n~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad---~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~  203 (446)
T PHA02946        131 -AKI--NNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE---ARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSK  203 (446)
T ss_pred             -CCc--ccccCCCCCcHHH-HHHCCChHHHHHHHhcccc---ccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcc
Confidence             554  53 4666777775 4455667777777777766   4445566777777666543  3466777777666 444


Q ss_pred             CCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccccccc
Q 037504          159 KDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFD  238 (396)
Q Consensus       159 ~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d  238 (396)
                      .+.+|             .||||+|+..+..                         ..++++.++      .+.++|.+|
T Consensus       204 ~d~~G-------------~TpLH~Aa~~~~~-------------------------~~~iv~lLl------~gadin~~d  239 (446)
T PHA02946        204 PDHDG-------------NTPLHIVCSKTVK-------------------------NVDIINLLL------PSTDVNKQN  239 (446)
T ss_pred             cCCCC-------------CCHHHHHHHcCCC-------------------------cHHHHHHHH------cCCCCCCCC
Confidence            55555             8999999987521                         244554433      367899999


Q ss_pred             CCCCcHHHHHHHcCc-HHHHHHHHhhccccc----------------ccccccc-CCCCchhhhhhcCCCCCcccccc--
Q 037504          239 ENGHTIFHIAVSNRM-REIFKFIFEISSVAD----------------LLFDSKD-KDGNNILHLAGKLPPLNRLNIVS--  298 (396)
Q Consensus       239 ~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~----------------~~~n~~d-~~g~TpLh~A~~~~~~~~~~~l~--  298 (396)
                      ..|+||||+|+..++ .+++++|+++|++..                .+++..+ ..|.||||+|+..|+.+++++|.  
T Consensus       240 ~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~  319 (446)
T PHA02946        240 KFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDN  319 (446)
T ss_pred             CCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHC
Confidence            999999999999988 489999999987420                0122332 46889999999999999999984  


Q ss_pred             ----chhHhHHHHHHHHHHHhhhc-chhhhhhhcCCCCCchhhHHHHhH
Q 037504          299 ----VAALQLQRELLWFQEVKKVV-PRKFAEEKNNDGLTPGDLFIKEHE  342 (396)
Q Consensus       299 ----~~~~~~~~~l~~~~~v~~l~-~~~~~~~~~~~g~tpl~~a~~~~~  342 (396)
                          .++++.+...++.+.++.++ +|++++.+ .+|.||+++|.+...
T Consensus       320 ~~~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~  367 (446)
T PHA02946        320 DIICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNN  367 (446)
T ss_pred             CCccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCC
Confidence                36788888777777777766 78999986 589999999987543


No 2  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=2.6e-41  Score=263.03  Aligned_cols=217  Identities=20%  Similarity=0.217  Sum_probs=185.4

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504           23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA  102 (396)
Q Consensus        23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A  102 (396)
                      +.++.+.+++.....-|+.++++.+-.++.+.|.+|+||||+||..|+.+++++|++.   +++.+|.+|..|+||||+|
T Consensus         3 ~~~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq---~nv~~ddkDdaGWtPlhia   79 (226)
T KOG4412|consen    3 YASLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQ---PNVKPDDKDDAGWTPLHIA   79 (226)
T ss_pred             ccchHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhc---CCCCCCCccccCCchhhhh
Confidence            4678888999988889999999877778888677999999999999999999999984   6666799999999999999


Q ss_pred             HHcCCHHHHHHHHhc-CCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHH
Q 037504          103 AASGSVELVKATMEG-NEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALH  181 (396)
Q Consensus       103 ~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~  181 (396)
                      +..|+.++|+.|+.+ |+++   +..++.|+||||||+..|+.+++++|++.|+                          
T Consensus        80 ~s~g~~evVk~Ll~r~~adv---na~tn~G~T~LHyAagK~r~eIaqlLle~ga--------------------------  130 (226)
T KOG4412|consen   80 ASNGNDEVVKELLNRSGADV---NATTNGGQTCLHYAAGKGRLEIAQLLLEKGA--------------------------  130 (226)
T ss_pred             hhcCcHHHHHHHhcCCCCCc---ceecCCCcceehhhhcCChhhHHHHHHhcCC--------------------------
Confidence            999999999999999 8984   4455679999999999999999999998775                          


Q ss_pred             HHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHH
Q 037504          182 VLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIF  261 (396)
Q Consensus       182 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll  261 (396)
                                                                         .++.+|..|.||||.|+..|+.+++++|+
T Consensus       131 ---------------------------------------------------~i~~kD~~~qtplHRAAavGklkvie~Li  159 (226)
T KOG4412|consen  131 ---------------------------------------------------LIRIKDKQGQTPLHRAAAVGKLKVIEYLI  159 (226)
T ss_pred             ---------------------------------------------------CCcccccccCchhHHHHhccchhhHHHHH
Confidence                                                               35667888999999999999999999999


Q ss_pred             hhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          262 EISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       262 ~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      ..|+.    +|.+|+.|+||||.|.-.|+.+...+|                   ..+|++++..|++| ||+.++.-+.
T Consensus       160 ~~~a~----~n~qDk~G~TpL~~al~e~~~d~a~lL-------------------V~~gAd~~~edke~-t~~~~a~~~l  215 (226)
T KOG4412|consen  160 SQGAP----LNTQDKYGFTPLHHALAEGHPDVAVLL-------------------VRAGADTDREDKEG-TALRIACNEL  215 (226)
T ss_pred             hcCCC----CCcccccCccHHHHHHhccCchHHHHH-------------------HHhccceeeccccC-chHHHHHHHH
Confidence            99988    889999999999999777777766554                   56889999999988 9988877655


Q ss_pred             HHHHH
Q 037504          342 EELKK  346 (396)
Q Consensus       342 ~~~~~  346 (396)
                      .+..+
T Consensus       216 ~~alk  220 (226)
T KOG4412|consen  216 LEALK  220 (226)
T ss_pred             HHHHH
Confidence            44443


No 3  
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.2e-40  Score=316.45  Aligned_cols=263  Identities=21%  Similarity=0.250  Sum_probs=218.5

Q ss_pred             CCCccccccccCCC--cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504            3 HSAPLELHVYSNPP--VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK   80 (396)
Q Consensus         3 h~~~~~~~~~~~~~--~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~   80 (396)
                      +.+.++.++..++.  ...+..|.||||.|+..|+.++|++|++. |++++.. +..|.||||.|+..|+.+++++|++.
T Consensus        13 d~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~-Ga~~n~~-~~~~~t~L~~A~~~~~~~iv~~Ll~~   90 (434)
T PHA02874         13 DIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKH-GADINHI-NTKIPHPLLTAIKIGAHDIIKLLIDN   90 (434)
T ss_pred             CHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHC
Confidence            44456666654332  23566789999999999999999999975 8999987 88999999999999999999999988


Q ss_pred             hhh-------------------cccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc
Q 037504           81 MKA-------------------ENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL  141 (396)
Q Consensus        81 ~~~-------------------~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~  141 (396)
                      |..                   ..+|++.+|..|.||||+|+..|+.+++++|+++|++   ++.+|..|.||||+|+..
T Consensus        91 g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad---~n~~d~~g~tpLh~A~~~  167 (434)
T PHA02874         91 GVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGAD---VNIEDDNGCYPIHIAIKH  167 (434)
T ss_pred             CCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHHC
Confidence            721                   1124578899999999999999999999999999999   555677999999999999


Q ss_pred             CCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHH
Q 037504          142 GHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVE  220 (396)
Q Consensus       142 ~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  220 (396)
                      |+.+++++|++.++ .+..+..|             .||||+|+..|                           ..++++
T Consensus       168 ~~~~iv~~Ll~~g~~~n~~~~~g-------------~tpL~~A~~~g---------------------------~~~iv~  207 (434)
T PHA02874        168 NFFDIIKLLLEKGAYANVKDNNG-------------ESPLHNAAEYG---------------------------DYACIK  207 (434)
T ss_pred             CcHHHHHHHHHCCCCCCCCCCCC-------------CCHHHHHHHcC---------------------------CHHHHH
Confidence            99999999999998 55666666             89999999988                           356776


Q ss_pred             HHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCC-CCCccccccc
Q 037504          221 LLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLP-PLNRLNIVSV  299 (396)
Q Consensus       221 ~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~-~~~~~~~l~~  299 (396)
                      ++++     .+.+++.++..|.||||+|+..+. +++++|+ .|++    +|.+|..|+||||+|+..+ +.+++++|  
T Consensus       208 ~Ll~-----~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~----in~~d~~G~TpLh~A~~~~~~~~iv~~L--  274 (434)
T PHA02874        208 LLID-----HGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNAS----INDQDIDGSTPLHHAINPPCDIDIIDIL--  274 (434)
T ss_pred             HHHh-----CCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCC----CCCcCCCCCCHHHHHHhcCCcHHHHHHH--
Confidence            6654     567788888999999999998765 5666666 5777    7889999999999999875 56777766  


Q ss_pred             hhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504          300 AALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       300 ~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~  340 (396)
                                       +..|++++.+|..|+||+++|.+.
T Consensus       275 -----------------l~~gad~n~~d~~g~TpL~~A~~~  298 (434)
T PHA02874        275 -----------------LYHKADISIKDNKGENPIDTAFKY  298 (434)
T ss_pred             -----------------HHCcCCCCCCCCCCCCHHHHHHHh
Confidence                             668899999999999999999764


No 4  
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=5.5e-40  Score=318.00  Aligned_cols=263  Identities=15%  Similarity=0.141  Sum_probs=225.4

Q ss_pred             CCccccccccCCCcc-cccccchHHHHHHHcC---CHHHHHHHHHhCccccccccCCCCchHHHHHHHcC-CHHHHHHHH
Q 037504            4 SAPLELHVYSNPPVE-EIRTRRLKLYRVALNG---DWARAKVIYDEHKDEIGDVITRLGDTALHVAAAAN-RIDFVKKLV   78 (396)
Q Consensus         4 ~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g---~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g-~~~~v~~Ll   78 (396)
                      .+++++++..+++.. .+..|.||||+|+..|   +.++++.|++. |++++.+ +..|.||||+|+..| +.+++++|+
T Consensus        27 ~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~-Gadin~~-~~~g~TpLh~A~~~~~~~~iv~lLl  104 (471)
T PHA03095         27 VEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEA-GADVNAP-ERCGFTPLHLYLYNATTLDVIKLLI  104 (471)
T ss_pred             HHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCCcHHHHHHHH
Confidence            356777887776555 5778999999999999   99999999975 9999998 889999999999999 599999999


Q ss_pred             HHhhhcccchhcccCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcC--CHHHHHHHHhhc
Q 037504           79 KKMKAENLDLAKRNRIGCTALFYAA--ASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLG--HTEVVEFLYRET  154 (396)
Q Consensus        79 ~~~~~~~~d~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~--~~~~v~~Ll~~~  154 (396)
                      +.|  +++  +.+|..|+||||+|+  ..++.+++++|+++|++   ++..|..|.||||+|+..+  +.+++++|++.|
T Consensus       105 ~~g--a~i--n~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad---~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g  177 (471)
T PHA03095        105 KAG--ADV--NAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGAD---VNALDLYGMTPLAVLLKSRNANVELLRLLIDAG  177 (471)
T ss_pred             HcC--CCC--CCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcC
Confidence            998  777  999999999999999  55688999999999999   5566779999999998876  689999999999


Q ss_pred             c-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcc
Q 037504          155 K-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDL  233 (396)
Q Consensus       155 ~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~  233 (396)
                      + ....+..|             .||||+++.....                         ..++++.++     ..+.+
T Consensus       178 ~~~~~~d~~g-------------~t~Lh~~~~~~~~-------------------------~~~i~~~Ll-----~~g~~  214 (471)
T PHA03095        178 ADVYAVDDRF-------------RSLLHHHLQSFKP-------------------------RARIVRELI-----RAGCD  214 (471)
T ss_pred             CCCcccCCCC-------------CCHHHHHHHHCCC-------------------------cHHHHHHHH-----HcCCC
Confidence            8 33345556             8999998875311                         244555544     46888


Q ss_pred             cccccCCCCcHHHHHHHcCcH--HHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHH
Q 037504          234 IWKFDENGHTIFHIAVSNRMR--EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWF  311 (396)
Q Consensus       234 i~~~d~~g~t~Lh~A~~~~~~--~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~  311 (396)
                      ++.+|..|+||||+|+..|+.  .+++.|++.|++    +|.+|..|+||||+|+..|+.+++++|              
T Consensus       215 ~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~d----in~~d~~g~TpLh~A~~~~~~~~v~~L--------------  276 (471)
T PHA03095        215 PAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGIS----INARNRYGQTPLHYAAVFNNPRACRRL--------------  276 (471)
T ss_pred             CcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCCHHHHHHH--------------
Confidence            999999999999999999864  688999999999    899999999999999999999888887              


Q ss_pred             HHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          312 QEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       312 ~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                           +..|++++.+|.+|+||+++|....
T Consensus       277 -----L~~gad~n~~~~~g~tpl~~A~~~~  301 (471)
T PHA03095        277 -----IALGADINAVSSDGNTPLSLMVRNN  301 (471)
T ss_pred             -----HHcCCCCcccCCCCCCHHHHHHHhC
Confidence                 7789999999999999999998643


No 5  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.3e-39  Score=325.93  Aligned_cols=279  Identities=18%  Similarity=0.144  Sum_probs=222.7

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK   80 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~   80 (396)
                      +|..++++|+..+++.. .+..|.||||+|+..|+.++|+.|++. |++++.. +..|.||||+|+..|+.+++++|++.
T Consensus       156 ~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~~~iv~~LL~~-Gad~n~~-~~~g~t~L~~A~~~~~~~ivk~Ll~~  233 (682)
T PHA02876        156 DELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSY-GADVNII-ALDDLSVLECAVDSKNIDTIKAIIDN  233 (682)
T ss_pred             CcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCcc-CCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            56778888998887665 677899999999999999999999985 8999888 89999999999999999999888765


Q ss_pred             hhh-------------------------cccchhcccCCCCcHHHHHHHcCCH-HHHHHHHhcCCCCccccCCCCCCCcH
Q 037504           81 MKA-------------------------ENLDLAKRNRIGCTALFYAAASGSV-ELVKATMEGNEDITMVPQDDKDRMLP  134 (396)
Q Consensus        81 ~~~-------------------------~~~d~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~g~~~~~~~~~d~~g~tp  134 (396)
                      +..                         ...+++..|..|.||||+|+..++. +++++|++.|++   ++.+|..|.||
T Consensus       234 ~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gad---in~~d~~g~Tp  310 (682)
T PHA02876        234 RSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGAD---VNAKNIKGETP  310 (682)
T ss_pred             CCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCC---CCCcCCCCCCH
Confidence            411                         1123477788899999999999986 689999999998   55667789999


Q ss_pred             HHHHHhcC-CHHHHHHHHhhcc-cCCCCcchhHHHHHHhhcc---------------------chhhHHHHHHhcCCCCC
Q 037504          135 IVGAASLG-HTEVVEFLYRETK-NSLKDDDCIELLVKLIETD---------------------SYETALHVLARKNLTSS  191 (396)
Q Consensus       135 Lh~A~~~~-~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~---------------------~~~t~L~~a~~~~~~~~  191 (396)
                      ||+|+..| ..+++++|+..|+ .+..+..|.++||.+...+                     .|.||||+|+..+    
T Consensus       311 Lh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~----  386 (682)
T PHA02876        311 LYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRN----  386 (682)
T ss_pred             HHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcC----
Confidence            99999998 5899999999988 6677788877777765421                     2467777777766    


Q ss_pred             CCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCc-HHHHHHHHhhccccccc
Q 037504          192 NQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRM-REIFKFIFEISSVADLL  270 (396)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~  270 (396)
                                             ..++++.++     ..+.+++..+..|.||||+|+..++ ..++++|+++|++    
T Consensus       387 -----------------------~~~iv~~Ll-----~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gad----  434 (682)
T PHA02876        387 -----------------------NVVIINTLL-----DYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGAN----  434 (682)
T ss_pred             -----------------------CHHHHHHHH-----HCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCC----
Confidence                                   355665554     3567777778888888888876554 4567888888887    


Q ss_pred             cccccCCCCchhhhhhcCC-CCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504          271 FDSKDKDGNNILHLAGKLP-PLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       271 ~n~~d~~g~TpLh~A~~~~-~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~  340 (396)
                      +|.+|..|+||||+|+..+ +.+++++|                   +..|++++.+|..|.||+++|.+.
T Consensus       435 in~~d~~G~TpLh~Aa~~~~~~~iv~lL-------------------l~~Gad~n~~d~~g~tpl~~a~~~  486 (682)
T PHA02876        435 VNSKNKDLSTPLHYACKKNCKLDVIEML-------------------LDNGADVNAINIQNQYPLLIALEY  486 (682)
T ss_pred             CCcCCCCCChHHHHHHHhCCcHHHHHHH-------------------HHCCCCCCCCCCCCCCHHHHHHHh
Confidence            7788888888888888765 45666665                   668999999999999999999864


No 6  
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=2.7e-39  Score=315.88  Aligned_cols=280  Identities=12%  Similarity=0.026  Sum_probs=217.3

Q ss_pred             CCCccccccccC-CCcc-c-ccccchHHHHHHH--cCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCC--HHHHH
Q 037504            3 HSAPLELHVYSN-PPVE-E-IRTRRLKLYRVAL--NGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANR--IDFVK   75 (396)
Q Consensus         3 h~~~~~~~~~~~-~~~~-~-~~~g~t~Lh~A~~--~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~--~~~v~   75 (396)
                      +.+.+++|+..+ ++.. . +..|.||||.|+.  .++.++++.|++. |++++.+ |..|.||||+|+..|+  .++|+
T Consensus       154 ~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~-GADVN~k-D~~G~TPLH~Aa~~g~~~~eIVk  231 (764)
T PHA02716        154 DLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNN-GVNVNLQ-NNHLITPLHTYLITGNVCASVIK  231 (764)
T ss_pred             CHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHcCCCCHHHHH
Confidence            446788899887 5544 3 7889999999865  4678999999975 9999998 9999999999999995  58999


Q ss_pred             HHHHHhhhcccchhcccCCCCcHHHHH-------------------------------------HHcCCHHHHHHHHhcC
Q 037504           76 KLVKKMKAENLDLAKRNRIGCTALFYA-------------------------------------AASGSVELVKATMEGN  118 (396)
Q Consensus        76 ~Ll~~~~~~~~d~~~~d~~g~tpLh~A-------------------------------------~~~g~~~~v~~Ll~~g  118 (396)
                      +|++.|  +++  +.+|..|+||||+|                                     ++.|+.+++++|+++|
T Consensus       232 lLLe~G--ADV--N~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G  307 (764)
T PHA02716        232 KIIELG--GDM--DMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG  307 (764)
T ss_pred             HHHHcC--CCC--CCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence            999999  777  99999999999975                                     4457889999999999


Q ss_pred             CCCccccCCCCCCCcHHHHHHh--cCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCC
Q 037504          119 EDITMVPQDDKDRMLPIVGAAS--LGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNP  195 (396)
Q Consensus       119 ~~~~~~~~~d~~g~tpLh~A~~--~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~  195 (396)
                      ++   ++.+|..|+||||+|+.  .++.+++++|++.|+ .+..+..|             +||||+|+.......    
T Consensus       308 Ad---IN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GADIN~kD~~G-------------~TPLH~A~~~lav~~----  367 (764)
T PHA02716        308 VK---LHYKDSAGRTCLHQYILRHNISTDIIKLLHEYGNDLNEPDNIG-------------NTVLHTYLSMLSVVN----  367 (764)
T ss_pred             Cc---eeccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCCCccCCCCC-------------CCHHHHHHHhhhhhc----
Confidence            99   56678899999999764  467899999999998 56677777             788888765321000    


Q ss_pred             cchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHH----HHcCcHHHHHHHHhhcccc----
Q 037504          196 RGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIA----VSNRMREIFKFIFEISSVA----  267 (396)
Q Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A----~~~~~~~~v~~Ll~~g~~~----  267 (396)
                           .+.. ..   ......++++.|++     .+++++.+|..|+||||.+    ...++.+++++|++.|+..    
T Consensus       368 -----~ld~-~~---~~~~~~eVVklLL~-----~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~  433 (764)
T PHA02716        368 -----ILDP-ET---DNDIRLDVIQCLIS-----LGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKH  433 (764)
T ss_pred             -----cccc-cc---cccChHHHHHHHHH-----CCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhh
Confidence                 0000 00   00113566766653     6889999999999999943    2346789999998865310    


Q ss_pred             -----------------------------------------------------ccccccccCCCCchhhhhhcCCCCCcc
Q 037504          268 -----------------------------------------------------DLLFDSKDKDGNNILHLAGKLPPLNRL  294 (396)
Q Consensus       268 -----------------------------------------------------~~~~n~~d~~g~TpLh~A~~~~~~~~~  294 (396)
                                                                           ...+|.+|..|+||||+|+..|+.+++
T Consensus       434 ~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v  513 (764)
T PHA02716        434 RILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANI  513 (764)
T ss_pred             hhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccch
Confidence                                                                 001356688999999999999887655


Q ss_pred             -----ccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          295 -----NIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       295 -----~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                           ++|                   +..|++++.+|++|+|||++|.+.+
T Consensus       514 ~~e~~k~L-------------------L~~GADIN~~d~~G~TPLh~A~~~g  546 (764)
T PHA02716        514 VMDSFVYL-------------------LSIQYNINIPTKNGVTPLMLTMRNN  546 (764)
T ss_pred             hHHHHHHH-------------------HhCCCCCcccCCCCCCHHHHHHHcC
Confidence                 555                   6689999999999999999999755


No 7  
>PHA02876 ankyrin repeat protein; Provisional
Probab=100.00  E-value=3.8e-39  Score=324.28  Aligned_cols=280  Identities=16%  Similarity=0.111  Sum_probs=211.9

Q ss_pred             CCCCccccccccCCC--cccccccchHHHHHH------------------------------------------------
Q 037504            2 AHSAPLELHVYSNPP--VEEIRTRRLKLYRVA------------------------------------------------   31 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~--~~~~~~g~t~Lh~A~------------------------------------------------   31 (396)
                      ||.++|+.++..+|.  ...+..|.||||+|+                                                
T Consensus        52 g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~  131 (682)
T PHA02876         52 RQIDIVEEIIQQNPELIYITDHKCHSTLHTICIIPNVMDIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAISG  131 (682)
T ss_pred             HhhhHHHHHHHhCcccchhhchhhccccccccCCCCccccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            688888998888775  346777889999666                                                


Q ss_pred             ----------------------HcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchh
Q 037504           32 ----------------------LNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLA   89 (396)
Q Consensus        32 ----------------------~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~   89 (396)
                                            ..|+.++++.|++. |++++.+ |..|+||||+|+..|+.++|++|++.|  +++  +
T Consensus       132 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~Ll~~-Gadvn~~-d~~G~TpLh~Aa~~G~~~iv~~LL~~G--ad~--n  205 (682)
T PHA02876        132 NDIHYDKINESIEYMKLIKERIQQDELLIAEMLLEG-GADVNAK-DIYCITPIHYAAERGNAKMVNLLLSYG--ADV--N  205 (682)
T ss_pred             CcccHHhhccchhhhHHHHHHHHCCcHHHHHHHHhC-CCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHCC--CCc--C
Confidence                                  55778888888875 9999988 999999999999999999999999998  777  8


Q ss_pred             cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCc--------------------------cccCCCCCCCcHHHHHHhcCC
Q 037504           90 KRNRIGCTALFYAAASGSVELVKATMEGNEDIT--------------------------MVPQDDKDRMLPIVGAASLGH  143 (396)
Q Consensus        90 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~--------------------------~~~~~d~~g~tpLh~A~~~~~  143 (396)
                      ..+..|.||||+|+..|+.+++++|++.++++.                          .++..|..|.||||+|+..++
T Consensus       206 ~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~  285 (682)
T PHA02876        206 IIALDDLSVLECAVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPS  285 (682)
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCC
Confidence            899999999999999999988888776655432                          144556688999999999888


Q ss_pred             H-HHHHHHHhhcc-cCCCCcchhHHHHHHhhccc---------------------hhhHHHHHHhcCCCCCCCCCcchhh
Q 037504          144 T-EVVEFLYRETK-NSLKDDDCIELLVKLIETDS---------------------YETALHVLARKNLTSSNQNPRGIFQ  200 (396)
Q Consensus       144 ~-~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~---------------------~~t~L~~a~~~~~~~~~~~~~~~~~  200 (396)
                      . +++++|++.++ .+..+.+|.||||.+...+.                     +.||||+|+..+.            
T Consensus       286 ~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~------------  353 (682)
T PHA02876        286 LSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDR------------  353 (682)
T ss_pred             HHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCC------------
Confidence            5 58888888888 56677778655555544331                     2455555554331            


Q ss_pred             hhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCc
Q 037504          201 RYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNN  280 (396)
Q Consensus       201 ~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~T  280 (396)
                                    ..++++.+     ...+.+++.+|..|+||||+|+..|+.+++++|+++|++    ++..+..|.|
T Consensus       354 --------------~~~iv~lL-----l~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad----~~~~~~~g~T  410 (682)
T PHA02876        354 --------------NKDIVITL-----LELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD----IEALSQKIGT  410 (682)
T ss_pred             --------------cHHHHHHH-----HHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----ccccCCCCCc
Confidence                          12333322     346777788888888888888888888888888888887    6777778888


Q ss_pred             hhhhhhcCCCC-CccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          281 ILHLAGKLPPL-NRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       281 pLh~A~~~~~~-~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      |||+|+..++. .++++|                   +..|++++.+|..|+||||+|+...
T Consensus       411 ~Lh~A~~~~~~~~~vk~L-------------------l~~gadin~~d~~G~TpLh~Aa~~~  453 (682)
T PHA02876        411 ALHFALCGTNPYMSVKTL-------------------IDRGANVNSKNKDLSTPLHYACKKN  453 (682)
T ss_pred             hHHHHHHcCCHHHHHHHH-------------------HhCCCCCCcCCCCCChHHHHHHHhC
Confidence            88888765542 223333                   4579999999999999999998753


No 8  
>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00  E-value=4.6e-40  Score=256.04  Aligned_cols=192  Identities=24%  Similarity=0.330  Sum_probs=171.1

Q ss_pred             cccccccCC---CcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhh
Q 037504            7 LELHVYSNP---PVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKA   83 (396)
Q Consensus         7 ~~~~~~~~~---~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~   83 (396)
                      ++-+..+.+   +...|.+|+||||+||..|+.+++++|+++.+..+|.+ |..||||||+||..|+.|+|+.|+.+   
T Consensus        19 veel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-DdaGWtPlhia~s~g~~evVk~Ll~r---   94 (226)
T KOG4412|consen   19 VEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-DDAGWTPLHIAASNGNDEVVKELLNR---   94 (226)
T ss_pred             HHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-cccCCchhhhhhhcCcHHHHHHHhcC---
Confidence            344444544   45567799999999999999999999998878889998 99999999999999999999999998   


Q ss_pred             cccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcch
Q 037504           84 ENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDC  163 (396)
Q Consensus        84 ~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g  163 (396)
                      +..|+|+.++.|+||||||+..|.++|+++|+++|+.   ++.+|+.|+||||.|+.-|..+++++|+..++        
T Consensus        95 ~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~---i~~kD~~~qtplHRAAavGklkvie~Li~~~a--------  163 (226)
T KOG4412|consen   95 SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGAL---IRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA--------  163 (226)
T ss_pred             CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCC---CcccccccCchhHHHHhccchhhHHHHHhcCC--------
Confidence            3445599999999999999999999999999999988   77889999999999999999999999998765        


Q ss_pred             hHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCc
Q 037504          164 IELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHT  243 (396)
Q Consensus       164 ~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t  243 (396)
                                                                                           .+|..|+.|+|
T Consensus       164 ---------------------------------------------------------------------~~n~qDk~G~T  174 (226)
T KOG4412|consen  164 ---------------------------------------------------------------------PLNTQDKYGFT  174 (226)
T ss_pred             ---------------------------------------------------------------------CCCcccccCcc
Confidence                                                                                 36678999999


Q ss_pred             HHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhc
Q 037504          244 IFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGK  287 (396)
Q Consensus       244 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~  287 (396)
                      |||.|...|+.++..+|+++|++    ++..|++| ||+-.|+.
T Consensus       175 pL~~al~e~~~d~a~lLV~~gAd----~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  175 PLHHALAEGHPDVAVLLVRAGAD----TDREDKEG-TALRIACN  213 (226)
T ss_pred             HHHHHHhccCchHHHHHHHhccc----eeeccccC-chHHHHHH
Confidence            99999888999999999999999    78899999 99887754


No 9  
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.5e-39  Score=312.24  Aligned_cols=248  Identities=20%  Similarity=0.192  Sum_probs=224.9

Q ss_pred             cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHH-----HHHcCCHHHHHHHHHHhhhcccchhcc
Q 037504           17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHV-----AAAANRIDFVKKLVKKMKAENLDLAKR   91 (396)
Q Consensus        17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~-----A~~~g~~~~v~~Ll~~~~~~~~d~~~~   91 (396)
                      ...+..+.||||.|+..|+.++|+.|++. |++++.. +..|.||||+     |+..|+.+++++|++.|  +++  +..
T Consensus        29 ~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~-g~~~~~~-~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~g--a~i--~~~  102 (480)
T PHA03100         29 DYSYKKPVLPLYLAKEARNIDVVKILLDN-GADINSS-TKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYG--ANV--NAP  102 (480)
T ss_pred             hhhhcccchhhhhhhccCCHHHHHHHHHc-CCCCCCc-cccCcCHHHHHHHHHHHhhchHHHHHHHHHCC--CCC--CCC
Confidence            34677899999999999999999999986 8999888 8899999999     99999999999999998  777  999


Q ss_pred             cCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcC--CHHHHHHHHhhcc-cCCCCcchhHH
Q 037504           92 NRIGCTALFYAA--ASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLG--HTEVVEFLYRETK-NSLKDDDCIEL  166 (396)
Q Consensus        92 d~~g~tpLh~A~--~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~--~~~~v~~Ll~~~~-~~~~~~~g~~~  166 (396)
                      |..|.||||+|+  ..|+.+++++|+++|++   ++..+..|.||||+|+..|  +.+++++|++.|+ .+..+..|   
T Consensus       103 d~~g~tpL~~A~~~~~~~~~iv~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g---  176 (480)
T PHA03100        103 DNNGITPLLYAISKKSNSYSIVEYLLDNGAN---VNIKNSDGENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYG---  176 (480)
T ss_pred             CCCCCchhhHHHhcccChHHHHHHHHHcCCC---CCccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCC---
Confidence            999999999999  99999999999999999   5566779999999999999  9999999999998 45555566   


Q ss_pred             HHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCC-----
Q 037504          167 LVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENG-----  241 (396)
Q Consensus       167 l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g-----  241 (396)
                                .||||+|+..|                           ..++++.+++     .+.+++..+..|     
T Consensus       177 ----------~tpL~~A~~~~---------------------------~~~iv~~Ll~-----~ga~~~~~~~~~~~~~~  214 (480)
T PHA03100        177 ----------YTPLHIAVEKG---------------------------NIDVIKFLLD-----NGADINAGDIETLLFTI  214 (480)
T ss_pred             ----------CCHHHHHHHhC---------------------------CHHHHHHHHH-----cCCCccCCCCCCCcHHH
Confidence                      89999999988                           3677776664     577888888888     


Q ss_pred             -CcHHHHHHHcCc--HHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhc
Q 037504          242 -HTIFHIAVSNRM--REIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVV  318 (396)
Q Consensus       242 -~t~Lh~A~~~~~--~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~  318 (396)
                       .||||+|+..++  .+++++|+++|++    +|.+|..|.||||+|+..|+.+++++|                   +.
T Consensus       215 ~~t~l~~a~~~~~~~~~iv~~Ll~~g~d----in~~d~~g~TpL~~A~~~~~~~iv~~L-------------------l~  271 (480)
T PHA03100        215 FETPLHIAACYNEITLEVVNYLLSYGVP----INIKDVYGFTPLHYAVYNNNPEFVKYL-------------------LD  271 (480)
T ss_pred             HHhHHHHHHHhCcCcHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHH-------------------HH
Confidence             999999999999  9999999999999    899999999999999999999988887                   77


Q ss_pred             chhhhhhhcCCCCCchhhHHHHh
Q 037504          319 PRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       319 ~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      .|++++.+|..|.||+++|.+..
T Consensus       272 ~gad~n~~d~~g~tpl~~A~~~~  294 (480)
T PHA03100        272 LGANPNLVNKYGDTPLHIAILNN  294 (480)
T ss_pred             cCCCCCccCCCCCcHHHHHHHhC
Confidence            89999999999999999998643


No 10 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.5e-38  Score=281.66  Aligned_cols=225  Identities=16%  Similarity=0.160  Sum_probs=191.6

Q ss_pred             CccccccccCCCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhc
Q 037504            5 APLELHVYSNPPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAE   84 (396)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~   84 (396)
                      +++++|...++ ...|..|.||||+|+..|+.++++.|++. +++++..   +|+||||+|+..|+.+++++|++.|  +
T Consensus        13 ~~~~~Lis~~a-~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~-ga~~n~~---d~~TpLh~Aa~~g~~eiV~lLL~~G--a   85 (284)
T PHA02791         13 QLKSFLSSKDA-FKADVHGHSALYYAIADNNVRLVCTLLNA-GALKNLL---ENEFPLHQAATLEDTKIVKILLFSG--M   85 (284)
T ss_pred             HHHHHHHhCCC-CCCCCCCCcHHHHHHHcCCHHHHHHHHHC-cCCCcCC---CCCCHHHHHHHCCCHHHHHHHHHCC--C
Confidence            35677777666 45788999999999999999999999975 7877754   4789999999999999999999988  7


Q ss_pred             ccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCC-cHHHHHHhcCCHHHHHHHHhhcccCCCCcch
Q 037504           85 NLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRM-LPIVGAASLGHTEVVEFLYRETKNSLKDDDC  163 (396)
Q Consensus        85 ~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~-tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g  163 (396)
                      ++  +.+|..|+||||+|+..|+.+++++|+++|+++   +.++..|+ ||||+|+..|+.+++++|+++++.......|
T Consensus        86 dv--n~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadi---n~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~d~~~g  160 (284)
T PHA02791         86 DD--SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL---MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL  160 (284)
T ss_pred             CC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc---CccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcccccccC
Confidence            76  899999999999999999999999999999994   45566775 8999999999999999999987522211234


Q ss_pred             hHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCc
Q 037504          164 IELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHT  243 (396)
Q Consensus       164 ~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t  243 (396)
                                   .||||+|++.|                           ..++++.|++     ++++++.+|..|.|
T Consensus       161 -------------~TpLh~Aa~~g---------------------------~~eiv~lLL~-----~gAd~n~~d~~g~t  195 (284)
T PHA02791        161 -------------LSCIHITIKNG---------------------------HVDMMILLLD-----YMTSTNTNNSLLFI  195 (284)
T ss_pred             -------------ccHHHHHHHcC---------------------------CHHHHHHHHH-----CCCCCCcccCCCCC
Confidence                         89999999999                           3677776653     68889999999998


Q ss_pred             H-HHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504          244 I-FHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       244 ~-Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      | ||+|+..|+.+++++|+++|++    +|.+|.+| |||      ++.|++++|
T Consensus       196 ~~L~~Aa~~~~~e~v~lLl~~Ga~----in~~~~~~-~~l------~~~e~~~~l  239 (284)
T PHA02791        196 PDIKLAIDNKDLEMLQALFKYDIN----IYSVNLEN-VLL------DDAEIAKMI  239 (284)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCC----CccCcccC-ccC------CCHHHHHHH
Confidence            7 9999999999999999999999    89999955 776      666777776


No 11 
>PHA02874 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.8e-37  Score=296.41  Aligned_cols=241  Identities=19%  Similarity=0.195  Sum_probs=212.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA  104 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~  104 (396)
                      ..|+.|+..|+.+.++.|++..+..++.. +..|.||||.|+..|+.++|++|++.|  +++  +..+..|.||||+|+.
T Consensus         3 ~~l~~ai~~gd~~~v~~ll~~~~~~~n~~-~~~~~tpL~~A~~~g~~~iv~~Ll~~G--a~~--n~~~~~~~t~L~~A~~   77 (434)
T PHA02874          3 QDLRMCIYSGDIEAIEKIIKNKGNCINIS-VDETTTPLIDAIRSGDAKIVELFIKHG--ADI--NHINTKIPHPLLTAIK   77 (434)
T ss_pred             HHHHHHHhcCCHHHHHHHHHcCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHHHHH
Confidence            46899999999999999999878878877 888999999999999999999999998  776  8899999999999999


Q ss_pred             cCCHHHHHHHHhcCCCCc--------------------cccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcch
Q 037504          105 SGSVELVKATMEGNEDIT--------------------MVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDC  163 (396)
Q Consensus       105 ~g~~~~v~~Ll~~g~~~~--------------------~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g  163 (396)
                      .|+.+++++|+++|+++.                    .++.+|..|.||||+|+..|+.+++++|++.|+ .+..+.+|
T Consensus        78 ~~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g  157 (434)
T PHA02874         78 IGAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNG  157 (434)
T ss_pred             cCCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCC
Confidence            999999999999887642                    144567789999999999999999999999998 56666777


Q ss_pred             hHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCc
Q 037504          164 IELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHT  243 (396)
Q Consensus       164 ~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t  243 (396)
                                   .||||+|+..+                           ..++++.+++     .+..++..|..|+|
T Consensus       158 -------------~tpLh~A~~~~---------------------------~~~iv~~Ll~-----~g~~~n~~~~~g~t  192 (434)
T PHA02874        158 -------------CYPIHIAIKHN---------------------------FFDIIKLLLE-----KGAYANVKDNNGES  192 (434)
T ss_pred             -------------CCHHHHHHHCC---------------------------cHHHHHHHHH-----CCCCCCCCCCCCCC
Confidence                         89999999988                           4677776664     57788899999999


Q ss_pred             HHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhh
Q 037504          244 IFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFA  323 (396)
Q Consensus       244 ~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~  323 (396)
                      |||+|+..|+.+++++|++.|++    ++.++..|.||||+|+..+. +.                    ++.+..++++
T Consensus       193 pL~~A~~~g~~~iv~~Ll~~g~~----i~~~~~~g~TpL~~A~~~~~-~~--------------------i~~Ll~~~~i  247 (434)
T PHA02874        193 PLHNAAEYGDYACIKLLIDHGNH----IMNKCKNGFTPLHNAIIHNR-SA--------------------IELLINNASI  247 (434)
T ss_pred             HHHHHHHcCCHHHHHHHHhCCCC----CcCCCCCCCCHHHHHHHCCh-HH--------------------HHHHHcCCCC
Confidence            99999999999999999999999    88999999999999998764 22                    2235578899


Q ss_pred             hhhcCCCCCchhhHHHH
Q 037504          324 EEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       324 ~~~~~~g~tpl~~a~~~  340 (396)
                      +.+|..|+||||+|...
T Consensus       248 n~~d~~G~TpLh~A~~~  264 (434)
T PHA02874        248 NDQDIDGSTPLHHAINP  264 (434)
T ss_pred             CCcCCCCCCHHHHHHhc
Confidence            99999999999999874


No 12 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.6e-38  Score=302.74  Aligned_cols=240  Identities=17%  Similarity=0.155  Sum_probs=203.6

Q ss_pred             ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHH
Q 037504           20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTAL   99 (396)
Q Consensus        20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpL   99 (396)
                      ...+.||||+|+..|+.++|+.|++. |++++.+ |..|.||||+||..|+.+++++|++.+  ...  +.  ..+.+|+
T Consensus        34 ~~~~~tPLh~A~~~g~~e~vk~Ll~~-gadvn~~-d~~g~TpLh~A~~~g~~~~v~~Ll~~~--~~~--~~--~~~~~~l  105 (477)
T PHA02878         34 SLIPFIPLHQAVEARNLDVVKSLLTR-GHNVNQP-DHRDLTPLHIICKEPNKLGMKEMIRSI--NKC--SV--FYTLVAI  105 (477)
T ss_pred             cccCcchHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHCccHhHHHHHHHHH--hcc--cc--ccchhhH
Confidence            44678999999999999999999985 8999988 999999999999999999999999987  433  22  5678999


Q ss_pred             HHHHHcCCHH---------------------------------HHHHHHhcCCCCccccCCCCC-CCcHHHHHHhcCCHH
Q 037504          100 FYAAASGSVE---------------------------------LVKATMEGNEDITMVPQDDKD-RMLPIVGAASLGHTE  145 (396)
Q Consensus       100 h~A~~~g~~~---------------------------------~v~~Ll~~g~~~~~~~~~d~~-g~tpLh~A~~~~~~~  145 (396)
                      |.|+..++.+                                 ++++|+++|++   ++..|.. |.||||+|+..|+.+
T Consensus       106 ~~a~~~~~~ei~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gad---in~~~~~~g~tpLh~A~~~~~~~  182 (477)
T PHA02878        106 KDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD---INMKDRHKGNTALHYATENKDQR  182 (477)
T ss_pred             HHHHHcCCHHHHHHHHhCcccCcccCcHHHHhhccchhhHHHHHHHHHHHcCCC---CCccCCCCCCCHHHHHHhCCCHH
Confidence            9998887654                                 55666667777   4455666 999999999999999


Q ss_pred             HHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHH
Q 037504          146 VVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWE  224 (396)
Q Consensus       146 ~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~  224 (396)
                      ++++|++.|+ .+..+..|             .||||+|++.+                           ..++++.+++
T Consensus       183 iv~~Ll~~gad~n~~d~~g-------------~tpLh~A~~~~---------------------------~~~iv~~Ll~  222 (477)
T PHA02878        183 LTELLLSYGANVNIPDKTN-------------NSPLHHAVKHY---------------------------NKPIVHILLE  222 (477)
T ss_pred             HHHHHHHCCCCCCCcCCCC-------------CCHHHHHHHhC---------------------------CHHHHHHHHH
Confidence            9999999998 55566667             89999999988                           3667776654


Q ss_pred             HHHHhCCcccccccCCCCcHHHHHHHc-CcHHHHHHHHhhccccccccccccC-CCCchhhhhhcCCCCCccccccchhH
Q 037504          225 NFLFKYPDLIWKFDENGHTIFHIAVSN-RMREIFKFIFEISSVADLLFDSKDK-DGNNILHLAGKLPPLNRLNIVSVAAL  302 (396)
Q Consensus       225 ~ll~~~~~~i~~~d~~g~t~Lh~A~~~-~~~~~v~~Ll~~g~~~~~~~n~~d~-~g~TpLh~A~~~~~~~~~~~l~~~~~  302 (396)
                           .+.+++.+|..|+||||+|+.. ++.+++++|+++|++    +|.++. .|.||||+|+  ++.+++++|     
T Consensus       223 -----~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad----vn~~~~~~g~TpLh~A~--~~~~~v~~L-----  286 (477)
T PHA02878        223 -----NGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVD----VNAKSYILGLTALHSSI--KSERKLKLL-----  286 (477)
T ss_pred             -----cCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCC----CCccCCCCCCCHHHHHc--cCHHHHHHH-----
Confidence                 6888999999999999999976 689999999999999    888886 8999999994  455666665     


Q ss_pred             hHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504          303 QLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       303 ~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~  340 (396)
                                    +..|++++.+|..|.||+++|.+.
T Consensus       287 --------------l~~gadin~~d~~g~TpL~~A~~~  310 (477)
T PHA02878        287 --------------LEYGADINSLNSYKLTPLSSAVKQ  310 (477)
T ss_pred             --------------HHCCCCCCCcCCCCCCHHHHHHHH
Confidence                          668999999999999999999864


No 13 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=7.7e-38  Score=297.56  Aligned_cols=240  Identities=18%  Similarity=0.120  Sum_probs=212.2

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504           23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA  102 (396)
Q Consensus        23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A  102 (396)
                      .+++||.|+..|+.++++.|++. |++++.. +..|.||||+|+..|+.+++++|++.|  +++  +..+..+.||||+|
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~-g~~~n~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~g--a~~--~~~~~~~~t~L~~A   75 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDI-GINPNFE-IYDGISPIKLAMKFRDSEAIKLLMKHG--AIP--DVKYPDIESELHDA   75 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHC-CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CCc--cccCCCcccHHHHH
Confidence            46899999999999999999985 8999987 889999999999999999999999998  665  77888899999999


Q ss_pred             HHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHH
Q 037504          103 AASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALH  181 (396)
Q Consensus       103 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~  181 (396)
                      +..|+.+++++|++.|++....  .+..|.||||+|+..|+.+++++|++.|+ .+..+..|             .||||
T Consensus        76 ~~~g~~~~v~~Ll~~~~~~~~~--~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g-------------~tpLh  140 (413)
T PHA02875         76 VEEGDVKAVEELLDLGKFADDV--FYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDK-------------FSPLH  140 (413)
T ss_pred             HHCCCHHHHHHHHHcCCccccc--ccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCC-------------CCHHH
Confidence            9999999999999999875333  34489999999999999999999999998 55666666             89999


Q ss_pred             HHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHH
Q 037504          182 VLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIF  261 (396)
Q Consensus       182 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll  261 (396)
                      +|+..|                           ..++++.+++     .+.+++.+|..|+||||+|+..|+.+++++|+
T Consensus       141 ~A~~~~---------------------------~~~~v~~Ll~-----~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll  188 (413)
T PHA02875        141 LAVMMG---------------------------DIKGIELLID-----HKACLDIEDCCGCTPLIIAMAKGDIAICKMLL  188 (413)
T ss_pred             HHHHcC---------------------------CHHHHHHHHh-----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence            999988                           3567776654     57789999999999999999999999999999


Q ss_pred             hhccccccccccccCCC-CchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhh---cCCCCCchhhH
Q 037504          262 EISSVADLLFDSKDKDG-NNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEK---NNDGLTPGDLF  337 (396)
Q Consensus       262 ~~g~~~~~~~n~~d~~g-~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~---~~~g~tpl~~a  337 (396)
                      ++|++    ++..+..| .||+|+|+..++.+++++|                   +..|++++..   +..|.||++++
T Consensus       189 ~~ga~----~n~~~~~~~~t~l~~A~~~~~~~iv~~L-------------------l~~gad~n~~~~~~~~~~t~l~~~  245 (413)
T PHA02875        189 DSGAN----IDYFGKNGCVAALCYAIENNKIDIVRLF-------------------IKRGADCNIMFMIEGEECTILDMI  245 (413)
T ss_pred             hCCCC----CCcCCCCCCchHHHHHHHcCCHHHHHHH-------------------HHCCcCcchHhhcCCCchHHHHHH
Confidence            99999    78888877 4899999999999999888                   7788888765   67789999876


Q ss_pred             H
Q 037504          338 I  338 (396)
Q Consensus       338 ~  338 (396)
                      .
T Consensus       246 ~  246 (413)
T PHA02875        246 C  246 (413)
T ss_pred             H
Confidence            4


No 14 
>PHA02791 ankyrin-like protein; Provisional
Probab=100.00  E-value=8.1e-38  Score=276.95  Aligned_cols=223  Identities=15%  Similarity=0.064  Sum_probs=189.2

Q ss_pred             cCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHH
Q 037504           33 NGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVK  112 (396)
Q Consensus        33 ~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~  112 (396)
                      .++.++++.|++. +++  .. |.+|+||||+|+..|+.+++++|++.|  +++  +.+  +|.||||+|+..|+.++++
T Consensus         9 ~~~~~~~~~Lis~-~a~--~~-D~~G~TpLh~Aa~~g~~eiv~~Ll~~g--a~~--n~~--d~~TpLh~Aa~~g~~eiV~   78 (284)
T PHA02791          9 WKSKQLKSFLSSK-DAF--KA-DVHGHSALYYAIADNNVRLVCTLLNAG--ALK--NLL--ENEFPLHQAATLEDTKIVK   78 (284)
T ss_pred             cCHHHHHHHHHhC-CCC--CC-CCCCCcHHHHHHHcCCHHHHHHHHHCc--CCC--cCC--CCCCHHHHHHHCCCHHHHH
Confidence            4567788888774 663  44 899999999999999999999999998  665  554  4789999999999999999


Q ss_pred             HHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCC
Q 037504          113 ATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSS  191 (396)
Q Consensus       113 ~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~  191 (396)
                      +|+++|++   ++.+|..|+||||+|+..|+.+++++|++.++ .+..+..|+            .||||+|+..+    
T Consensus        79 lLL~~Gad---vn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~------------~TpL~~Aa~~g----  139 (284)
T PHA02791         79 ILLFSGMD---DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGW------------KTSFYHAVMLN----  139 (284)
T ss_pred             HHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCC------------cHHHHHHHHcC----
Confidence            99999999   56677899999999999999999999999998 444555441            48999999988    


Q ss_pred             CCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccccccc-CCCCcHHHHHHHcCcHHHHHHHHhhccccccc
Q 037504          192 NQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFD-ENGHTIFHIAVSNRMREIFKFIFEISSVADLL  270 (396)
Q Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~  270 (396)
                                             ..+++++|++.    .+..   .| ..|.||||+|+++|+.+++++|+++|++    
T Consensus       140 -----------------------~~eivk~LL~~----~~~~---~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd----  185 (284)
T PHA02791        140 -----------------------DVSIVSYFLSE----IPST---FDLAILLSCIHITIKNGHVDMMILLLDYMTS----  185 (284)
T ss_pred             -----------------------CHHHHHHHHhc----CCcc---cccccCccHHHHHHHcCCHHHHHHHHHCCCC----
Confidence                                   36777777653    2222   23 3589999999999999999999999999    


Q ss_pred             cccccCCCCch-hhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHH
Q 037504          271 FDSKDKDGNNI-LHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFI  338 (396)
Q Consensus       271 ~n~~d~~g~Tp-Lh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~  338 (396)
                      +|.+|..|.|| ||+|+..|+.+++++|                   +.+|++++.+|..| ||++.+.
T Consensus       186 ~n~~d~~g~t~~L~~Aa~~~~~e~v~lL-------------------l~~Ga~in~~~~~~-~~l~~~e  234 (284)
T PHA02791        186 TNTNNSLLFIPDIKLAIDNKDLEMLQAL-------------------FKYDINIYSVNLEN-VLLDDAE  234 (284)
T ss_pred             CCcccCCCCChHHHHHHHcCCHHHHHHH-------------------HHCCCCCccCcccC-ccCCCHH
Confidence            88999999987 9999999999999988                   88999999999955 9997764


No 15 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.5e-38  Score=298.55  Aligned_cols=269  Identities=22%  Similarity=0.255  Sum_probs=174.6

Q ss_pred             cccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcc
Q 037504            7 LELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAEN   85 (396)
Q Consensus         7 ~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~   85 (396)
                      ++.++..++... .+.++.+|+|+|+..|+.++++.|++. ++++|.. |..|.||||+||..++.|..+.|++.|  ++
T Consensus       104 i~~Lls~gad~~~~n~~~~aplh~A~~~~~~s~L~~Ll~~-~~dvnl~-de~~~TpLh~A~~~~~~E~~k~Li~~~--a~  179 (929)
T KOG0510|consen  104 IQVLLSYGADTPLRNLNKNAPLHLAADSGNYSCLKLLLDY-GADVNLE-DENGFTPLHLAARKNKVEAKKELINKG--AD  179 (929)
T ss_pred             HHHHHhcCCCCChhhhhccCchhhccccchHHHHHHHHHh-cCCcccc-ccCCCchhhHHHhcChHHHHHHHHhcC--CC
Confidence            444454444333 345555666666666666666555553 4555555 555666666666666666555555555  44


Q ss_pred             cchhcccCCCCcHHHHHHHcCCHHHHHHHHh-----cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc--cC-
Q 037504           86 LDLAKRNRIGCTALFYAAASGSVELVKATME-----GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK--NS-  157 (396)
Q Consensus        86 ~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~-----~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~--~~-  157 (396)
                      +  -..|.+|++|+|.|+++|..++++..+.     ++..   ++-.+..+.||||.|+..|+.++++..|+.++  .. 
T Consensus       180 ~--~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~---in~~~n~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~  254 (929)
T KOG0510|consen  180 P--CKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTH---INFDNNEKATPLHLAVEGGDIEMLKMCLQNGKKIADV  254 (929)
T ss_pred             C--CcccCcCCchHHHHHHhcchhhhhhhhccccchhhcc---cccccCCCCcchhhhhhcCCHHHHHHHHhCccccchh
Confidence            3  4455555555555555555555555554     3333   22223345555555555555555555554443  00 


Q ss_pred             -------------CCCcchhHHHHHHhhccc--------------------hhhHHHHHHhcCCCCCCCCCcchhhhhhh
Q 037504          158 -------------LKDDDCIELLVKLIETDS--------------------YETALHVLARKNLTSSNQNPRGIFQRYFN  204 (396)
Q Consensus       158 -------------~~~~~g~~~l~~~~~~~~--------------------~~t~L~~a~~~~~~~~~~~~~~~~~~~~~  204 (396)
                                   ..|.+|.+|||++...+.                    +.||||.|++.|                 
T Consensus       255 ~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg-----------------  317 (929)
T KOG0510|consen  255 QLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYG-----------------  317 (929)
T ss_pred             hhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcc-----------------
Confidence                         123444444444443322                    189999999988                 


Q ss_pred             ccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccc--cccCCCCchh
Q 037504          205 LGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFD--SKDKDGNNIL  282 (396)
Q Consensus       205 ~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n--~~d~~g~TpL  282 (396)
                                ..+.++.+++   .......|..|-.|+||||.|++.|+..++++|++.|++.   .+  ..|.+|+|||
T Consensus       318 ----------~~ntv~rLL~---~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~---~~~~e~D~dg~TaL  381 (929)
T KOG0510|consen  318 ----------RINTVERLLQ---ESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALF---LNMSEADSDGNTAL  381 (929)
T ss_pred             ----------cHHHHHHHHh---CcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhh---hcccccccCCchhh
Confidence                      4666666665   2566678899999999999999999999999999999983   22  5699999999


Q ss_pred             hhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhh
Q 037504          283 HLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDL  336 (396)
Q Consensus       283 h~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~  336 (396)
                      |+|+..|+..++++|                   +.+|+++..+|+.|+|++++
T Consensus       382 H~Aa~~g~~~av~~L-------------------i~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  382 HLAAKYGNTSAVQKL-------------------ISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             hHHHHhccHHHHHHH-------------------HHcCCceeeccccccccccc
Confidence            999999999888887                   78999999999999999984


No 16 
>PHA02716 CPXV016; CPX019; EVM010; Provisional
Probab=100.00  E-value=1.3e-37  Score=304.05  Aligned_cols=276  Identities=13%  Similarity=0.077  Sum_probs=194.1

Q ss_pred             CCCccccccccCCCcc-cccccchHHHHHHHcCC--HHHHHHHHHhCccccccccCCCCchHHHHH--------------
Q 037504            3 HSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGD--WARAKVIYDEHKDEIGDVITRLGDTALHVA--------------   65 (396)
Q Consensus         3 h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~--~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A--------------   65 (396)
                      +.+++++|+..+++.. ++..|.||||+|+..|+  .++|+.||+. |++++.+ |..|+||||+|              
T Consensus       191 ~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIVklLLe~-GADVN~k-D~~G~TPLh~Ai~~a~n~~~EIvki  268 (764)
T PHA02716        191 DIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVIKKIIEL-GGDMDMK-CVNGMSPIMTYIINIDNINPEITNI  268 (764)
T ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHhhhccCHHHHHH
Confidence            4468899998887665 67889999999999995  4899999975 9999998 99999999975              


Q ss_pred             -----------------------HHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH--cCCHHHHHHHHhcCCC
Q 037504           66 -----------------------AAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA--SGSVELVKATMEGNED  120 (396)
Q Consensus        66 -----------------------~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~--~g~~~~v~~Ll~~g~~  120 (396)
                                             +..|+.+++++|++.|  +++  +.+|..|+||||+|+.  .++.+++++|+++|++
T Consensus       269 Lie~~d~n~~~~~~~~L~~~i~AA~~g~leiVklLLe~G--AdI--N~kD~~G~TPLH~Aaa~~~~~~eIVklLLe~GAD  344 (764)
T PHA02716        269 YIESLDGNKVKNIPMILHSYITLARNIDISVVYSFLQPG--VKL--HYKDSAGRTCLHQYILRHNISTDIIKLLHEYGND  344 (764)
T ss_pred             HHHhccccccccchhhhHHHHHHHHcCCHHHHHHHHhCC--Cce--eccCCCCCCHHHHHHHHhCCCchHHHHHHHcCCC
Confidence                                   3457888999999988  776  9999999999999864  4689999999999999


Q ss_pred             CccccCCCCCCCcHHHHHHh--------------cCCHHHHHHHHhhcc-cCCCCcchhHHHHHHh--hcc-chhhHHHH
Q 037504          121 ITMVPQDDKDRMLPIVGAAS--------------LGHTEVVEFLYRETK-NSLKDDDCIELLVKLI--ETD-SYETALHV  182 (396)
Q Consensus       121 ~~~~~~~d~~g~tpLh~A~~--------------~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~--~~~-~~~t~L~~  182 (396)
                         ++.+|..|+||||+|+.              .++.+++++|++.|+ .+..+..|+|||+.+.  ... .....+.+
T Consensus       345 ---IN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvkl  421 (764)
T PHA02716        345 ---LNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDC  421 (764)
T ss_pred             ---CccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHH
Confidence               66678899999999875              368999999999999 6677888855554211  100 00111111


Q ss_pred             HHhcCCCCCCCCCcchhhhhhhccchh-hhhHH----------------------HHHHHHHHHHHHHHhCCcccccccC
Q 037504          183 LARKNLTSSNQNPRGIFQRYFNLGAKA-VENER----------------------ALELVELLWENFLFKYPDLIWKFDE  239 (396)
Q Consensus       183 a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------------------~~~~~~~ll~~ll~~~~~~i~~~d~  239 (396)
                      ....+........ .....+.+.+... ..+..                      ..+++..     +......++..|.
T Consensus       422 Lis~~~~~~~~~~-~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~-----~ii~~~nvN~~D~  495 (764)
T PHA02716        422 LISDKVLNMVKHR-ILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHC-----AIIERYNNAVCET  495 (764)
T ss_pred             HHhCcchhhhhhh-hhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHH-----HHHhhccccccCC
Confidence            1111100000000 0000000000000 00000                      0011111     1112345788899


Q ss_pred             CCCcHHHHHHHcCcH-----HHHHHHHhhccccccccccccCCCCchhhhhhcCCCC-----Cccccc
Q 037504          240 NGHTIFHIAVSNRMR-----EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPL-----NRLNIV  297 (396)
Q Consensus       240 ~g~t~Lh~A~~~~~~-----~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~-----~~~~~l  297 (396)
                      .|+||||+|+..|+.     +++++|++.|++    +|.+|++|+||||+|+++|+.     +++++|
T Consensus       496 ~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GAD----IN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~L  559 (764)
T PHA02716        496 SGMTPLHVSIISHTNANIVMDSFVYLLSIQYN----INIPTKNGVTPLMLTMRNNRLSGHQWYIVKNI  559 (764)
T ss_pred             CCCCHHHHHHHcCCccchhHHHHHHHHhCCCC----CcccCCCCCCHHHHHHHcCCccccHHHHHHHH
Confidence            999999999999876     456999999999    899999999999999999987     666666


No 17 
>PHA02917 ankyrin-like protein; Provisional
Probab=100.00  E-value=2.6e-37  Score=303.88  Aligned_cols=299  Identities=15%  Similarity=0.081  Sum_probs=209.2

Q ss_pred             ccCCCcccccccchHHHHHHHc---CCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCC------------------
Q 037504           12 YSNPPVEEIRTRRLKLYRVALN---GDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANR------------------   70 (396)
Q Consensus        12 ~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~------------------   70 (396)
                      ...++..+|.+|+||||+|+..   |+.++|+.||+. |++++.+ +..|+||||+|+..|+                  
T Consensus        21 ~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~-ga~v~~~-~~~g~TpL~~Aa~~g~~~v~~~~~~~Ll~~~~~~   98 (661)
T PHA02917         21 DRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDS-GTNPLHK-NWRQLTPLEEYTNSRHVKVNKDIAMALLEATGYS   98 (661)
T ss_pred             ccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHC-CCCcccc-CCCCCCHHHHHHHcCChhHHHHHHHHHHhccCCC
Confidence            3334444588899999987555   779999999874 8888877 8889999998887665                  


Q ss_pred             -----------------HHHHHHHHHHhhhcccchhcccCCCCcHHHHHH--HcCCHHHHHHHHhcCCCCccccCCCCCC
Q 037504           71 -----------------IDFVKKLVKKMKAENLDLAKRNRIGCTALFYAA--ASGSVELVKATMEGNEDITMVPQDDKDR  131 (396)
Q Consensus        71 -----------------~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~--~~g~~~~v~~Ll~~g~~~~~~~~~d~~g  131 (396)
                                       .++|++|++.|  +++  +.+|..|+||||+|+  ..|+.+++++|+++|++++..+..+..|
T Consensus        99 n~~~~~~~~~~a~~~~~~e~vk~Ll~~G--adi--n~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d~~~~~g  174 (661)
T PHA02917         99 NINDFNIFSYMKSKNVDVDLIKVLVEHG--FDL--SVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYEDEDDEYG  174 (661)
T ss_pred             CCCCcchHHHHHhhcCCHHHHHHHHHcC--CCC--CccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccccccccc
Confidence                             34455555555  554  888888999998543  4678999999999998865333333334


Q ss_pred             -----------CcHHHHHHh-----------cCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccc-------------
Q 037504          132 -----------MLPIVGAAS-----------LGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDS-------------  175 (396)
Q Consensus       132 -----------~tpLh~A~~-----------~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~-------------  175 (396)
                                 .||||+|+.           +++.+++++|++.|+ .+..+.+|.+|||.+...+.             
T Consensus       175 ~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~g~  254 (661)
T PHA02917        175 YAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMKGI  254 (661)
T ss_pred             cccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHhCC
Confidence                       489998875           457889999998888 66777888888887775443             


Q ss_pred             ------------hhhHHHHHHhcCCCCCC--CCCcchhhhhhhccchhh---------------------h-------h-
Q 037504          176 ------------YETALHVLARKNLTSSN--QNPRGIFQRYFNLGAKAV---------------------E-------N-  212 (396)
Q Consensus       176 ------------~~t~L~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------------------~-------~-  212 (396)
                                  +.+|+++|+..++....  ....++++.+.+.|....                     .       + 
T Consensus       255 d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (661)
T PHA02917        255 DNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHI  334 (661)
T ss_pred             cccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHH
Confidence                        13556666532211000  011223333333332100                     0       0 


Q ss_pred             ------H--HHHHHHHHHHH-------------------------HHHHhCCcccccccCCCCcHHHHHHHcC-------
Q 037504          213 ------E--RALELVELLWE-------------------------NFLFKYPDLIWKFDENGHTIFHIAVSNR-------  252 (396)
Q Consensus       213 ------~--~~~~~~~~ll~-------------------------~ll~~~~~~i~~~d~~g~t~Lh~A~~~~-------  252 (396)
                            .  ...++++.|++                         .++...+++++..+.+|+||||.|++.+       
T Consensus       335 l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~  414 (661)
T PHA02917        335 LIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFY  414 (661)
T ss_pred             HHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhh
Confidence                  0  01224444333                         3445567766777778999999997543       


Q ss_pred             ----------------cHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhh
Q 037504          253 ----------------MREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKK  316 (396)
Q Consensus       253 ----------------~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~  316 (396)
                                      ..+++++|+++|++    +|.+|..|+||||+|+..++.+++++|                   
T Consensus       415 ~~~~~~~~~~~~~~~~~~~~v~~Ll~~GAd----IN~kd~~G~TpLh~Aa~~~~~~~v~~L-------------------  471 (661)
T PHA02917        415 TYTYKKGLCDMSYACPILSTINICLPYLKD----INMIDKRGETLLHKAVRYNKQSLVSLL-------------------  471 (661)
T ss_pred             hhhhhhccchhhhhhhhHHHHHHHHHCCCC----CCCCCCCCcCHHHHHHHcCCHHHHHHH-------------------
Confidence                            35678999999999    899999999999999999998888777                   


Q ss_pred             hcchhhhhhhcCCCCCchhhHHH
Q 037504          317 VVPRKFAEEKNNDGLTPGDLFIK  339 (396)
Q Consensus       317 l~~~~~~~~~~~~g~tpl~~a~~  339 (396)
                      +..|++++.+|..|.|||++|..
T Consensus       472 l~~GAdin~~d~~G~T~L~~A~~  494 (661)
T PHA02917        472 LESGSDVNIRSNNGYTCIAIAIN  494 (661)
T ss_pred             HHCcCCCCCCCCCCCCHHHHHHH
Confidence            77999999999999999999985


No 18 
>PHA03100 ankyrin repeat protein; Provisional
Probab=100.00  E-value=9.8e-38  Score=302.90  Aligned_cols=246  Identities=20%  Similarity=0.234  Sum_probs=218.1

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHH-----HHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHH--HcCCHHH
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYR-----VALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAA--AANRIDF   73 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~-----A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~--~~g~~~~   73 (396)
                      +|.+++++++..+.+.. .+..|.||||+     |+..|+.++++.|++. |++++.. +..|.||||+|+  ..|+.++
T Consensus        46 ~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~-ga~i~~~-d~~g~tpL~~A~~~~~~~~~i  123 (480)
T PHA03100         46 RNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEY-GANVNAP-DNNGITPLLYAISKKSNSYSI  123 (480)
T ss_pred             CCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHC-CCCCCCC-CCCCCchhhHHHhcccChHHH
Confidence            56778999998876554 56778999999     9999999999999985 8999877 999999999999  9999999


Q ss_pred             HHHHHHHhhhcccchhcccCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q 037504           74 VKKLVKKMKAENLDLAKRNRIGCTALFYAAASG--SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLY  151 (396)
Q Consensus        74 v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll  151 (396)
                      +++|++.|  +++  +.+|..|.||||+|+..|  +.+++++|+++|++   ++.+|..|.||||+|+..|+.+++++|+
T Consensus       124 v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~~iv~~Ll~~g~d---in~~d~~g~tpL~~A~~~~~~~iv~~Ll  196 (480)
T PHA03100        124 VEYLLDNG--ANV--NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD---INAKNRYGYTPLHIAVEKGNIDVIKFLL  196 (480)
T ss_pred             HHHHHHcC--CCC--CccCCCCCcHHHHHHHcCCChHHHHHHHHHCCCC---cccccCCCCCHHHHHHHhCCHHHHHHHH
Confidence            99999998  776  899999999999999999  99999999999999   5566779999999999999999999999


Q ss_pred             hhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhC
Q 037504          152 RETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKY  230 (396)
Q Consensus       152 ~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~  230 (396)
                      +.|+ ....+..|.++++.       .||||+|+..++.                         ..++++.+++     .
T Consensus       197 ~~ga~~~~~~~~~~~~~~~-------~t~l~~a~~~~~~-------------------------~~~iv~~Ll~-----~  239 (480)
T PHA03100        197 DNGADINAGDIETLLFTIF-------ETPLHIAACYNEI-------------------------TLEVVNYLLS-----Y  239 (480)
T ss_pred             HcCCCccCCCCCCCcHHHH-------HhHHHHHHHhCcC-------------------------cHHHHHHHHH-----c
Confidence            9998 55555666555554       7999999998821                         1566766654     5


Q ss_pred             CcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504          231 PDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       231 ~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      +.+++.+|..|.||||+|+..|+.+++++|+++|++    +|.+|..|.||||+|+..++.+++++|
T Consensus       240 g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad----~n~~d~~g~tpl~~A~~~~~~~iv~~L  302 (480)
T PHA03100        240 GVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGAN----PNLVNKYGDTPLHIAILNNNKEIFKLL  302 (480)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCccCCCCCcHHHHHHHhCCHHHHHHH
Confidence            788999999999999999999999999999999998    889999999999999999999999888


No 19 
>PHA02946 ankyin-like protein; Provisional
Probab=100.00  E-value=6.4e-37  Score=290.53  Aligned_cols=218  Identities=17%  Similarity=0.141  Sum_probs=183.5

Q ss_pred             cchHHHHHHH--cCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504           23 RRLKLYRVAL--NGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF  100 (396)
Q Consensus        23 g~t~Lh~A~~--~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh  100 (396)
                      +.++||.++.  .++.++|+.|++. |++++.+ |..|.||||+|+..|+.++|++|+++|  +++  +.+|..|+||||
T Consensus        37 ~~~~Lh~~~~~~~~~~~iv~~Ll~~-Gadvn~~-d~~G~TpLh~Aa~~g~~eiv~lLL~~G--Adi--n~~d~~g~TpLh  110 (446)
T PHA02946         37 NYHILHAYCGIKGLDERFVEELLHR-GYSPNET-DDDGNYPLHIASKINNNRIVAMLLTHG--ADP--NACDKQHKTPLY  110 (446)
T ss_pred             CChHHHHHHHhcCCCHHHHHHHHHC-cCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHCc--CCC--CCCCCCCCCHHH
Confidence            4689998764  4467899999975 9999998 999999999999999999999999998  777  999999999999


Q ss_pred             HHHHcC--CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchh
Q 037504          101 YAAASG--SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYE  177 (396)
Q Consensus       101 ~A~~~g--~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~  177 (396)
                      +|+..+  ..+++++|+++|++++.  ..|..|.|||| |+..++.+++++|++.++ .+..+..|             +
T Consensus       111 ~A~~~~~~~~e~v~lLl~~Gadin~--~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G-------------~  174 (446)
T PHA02946        111 YLSGTDDEVIERINLLVQYGAKINN--SVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFG-------------K  174 (446)
T ss_pred             HHHHcCCchHHHHHHHHHcCCCccc--ccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCC-------------C
Confidence            998866  48999999999999532  34668999998 666799999999999998 66677777             8


Q ss_pred             hHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcC--cHH
Q 037504          178 TALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNR--MRE  255 (396)
Q Consensus       178 t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~--~~~  255 (396)
                      ||||+|+..++.                         ..++++.++     ..+.+++.+|.+|+||||+|+..+  +.+
T Consensus       175 t~Lh~A~~~~~~-------------------------~~~~v~~Ll-----~~Gadin~~d~~G~TpLH~Aa~~~~~~~~  224 (446)
T PHA02946        175 NHIHRHLMSDNP-------------------------KASTISWMM-----KLGISPSKPDHDGNTPLHIVCSKTVKNVD  224 (446)
T ss_pred             CHHHHHHHhcCC-------------------------CHHHHHHHH-----HcCCCCcccCCCCCCHHHHHHHcCCCcHH
Confidence            999998875521                         234555544     468899999999999999999986  789


Q ss_pred             HHHHHHhhccccccccccccCCCCchhhhhhcCCCC-Cccccc
Q 037504          256 IFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPL-NRLNIV  297 (396)
Q Consensus       256 ~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~-~~~~~l  297 (396)
                      ++++|+. |++    +|.+|..|+||||+|++.++. +++++|
T Consensus       225 iv~lLl~-gad----in~~d~~G~TpLh~A~~~~~~~~~~~~L  262 (446)
T PHA02946        225 IINLLLP-STD----VNKQNKFGDSPLTLLIKTLSPAHLINKL  262 (446)
T ss_pred             HHHHHHc-CCC----CCCCCCCCCCHHHHHHHhCChHHHHHHH
Confidence            9999985 888    899999999999999999874 555544


No 20 
>KOG0510 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=1.8e-37  Score=291.35  Aligned_cols=281  Identities=20%  Similarity=0.213  Sum_probs=206.6

Q ss_pred             cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCC
Q 037504           17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGC   96 (396)
Q Consensus        17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~   96 (396)
                      ...|..|++|||.|+.....+.++.|++. |++.+.. +.++.+|||+|+..|+.+.++.|++++  .++  |..|..|.
T Consensus        82 ~a~D~~~n~~l~~a~~~~~~~~i~~Lls~-gad~~~~-n~~~~aplh~A~~~~~~s~L~~Ll~~~--~dv--nl~de~~~  155 (929)
T KOG0510|consen   82 YAKDSADNTPLHAAVEYNQGDKIQVLLSY-GADTPLR-NLNKNAPLHLAADSGNYSCLKLLLDYG--ADV--NLEDENGF  155 (929)
T ss_pred             hhhhcccCchhHHHhhcchHHHHHHHHhc-CCCCChh-hhhccCchhhccccchHHHHHHHHHhc--CCc--cccccCCC
Confidence            34688899999999999999999999986 9999888 999999999999999999999999998  666  99999999


Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhh-----cc-cCCCCcchhHHHHHH
Q 037504           97 TALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRE-----TK-NSLKDDDCIELLVKL  170 (396)
Q Consensus        97 tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-----~~-~~~~~~~g~~~l~~~  170 (396)
                      ||||.||..++.|..+.|++.|++   +...|.+|.+|+|.|+..|..++.+..+..     .. .+..+..+       
T Consensus       156 TpLh~A~~~~~~E~~k~Li~~~a~---~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n~~-------  225 (929)
T KOG0510|consen  156 TPLHLAARKNKVEAKKELINKGAD---PCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNNEK-------  225 (929)
T ss_pred             chhhHHHhcChHHHHHHHHhcCCC---CCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccCCC-------
Confidence            999999999999988999999999   667788999999999999999999999982     22 44556666       


Q ss_pred             hhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH-HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHH
Q 037504          171 IETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE-RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAV  249 (396)
Q Consensus       171 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~  249 (396)
                            .+|||.|+..|+.       ...+...+.++...... ......+           ..+|..|++|.||||+|+
T Consensus       226 ------~~pLhlAve~g~~-------e~lk~~L~n~~~~a~~~~~~~~q~k-----------elv~~~d~dg~tpLH~a~  281 (929)
T KOG0510|consen  226 ------ATPLHLAVEGGDI-------EMLKMCLQNGKKIADVQLDAMQQEK-----------ELVNDEDNDGCTPLHYAA  281 (929)
T ss_pred             ------CcchhhhhhcCCH-------HHHHHHHhCccccchhhhHHHHHHH-----------HHhhcccccCCchHHHHH
Confidence                  5666666666632       23333333322211110 0011111           124556666777777777


Q ss_pred             HcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccc---------------hhHhHHHHHHHHHHH
Q 037504          250 SNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSV---------------AALQLQRELLWFQEV  314 (396)
Q Consensus       250 ~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~---------------~~~~~~~~l~~~~~v  314 (396)
                      +.|++++++.|+..|++    ++.+++++.||||.||.+|+...++-|..               +++++++.-++.+.+
T Consensus       282 r~G~~~svd~Ll~~Ga~----I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~  357 (929)
T KOG0510|consen  282 RQGGPESVDNLLGFGAS----INSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVV  357 (929)
T ss_pred             HcCChhHHHHHHHcCCc----ccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHH
Confidence            77777777777776666    66666667777777776666655554321               445555555555555


Q ss_pred             hhhc-chhhhh---hhcCCCCCchhhHHHHh
Q 037504          315 KKVV-PRKFAE---EKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       315 ~~l~-~~~~~~---~~~~~g~tpl~~a~~~~  341 (396)
                      +.|+ .|++..   ..|.+|.||||+|...+
T Consensus       358 qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g  388 (929)
T KOG0510|consen  358 QLLLNKGALFLNMSEADSDGNTALHLAAKYG  388 (929)
T ss_pred             HHHHhcChhhhcccccccCCchhhhHHHHhc
Confidence            5555 567665   55999999999998754


No 21 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=100.00  E-value=1.6e-36  Score=279.69  Aligned_cols=211  Identities=24%  Similarity=0.317  Sum_probs=179.1

Q ss_pred             ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc-CCCCcHHH
Q 037504           22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN-RIGCTALF  100 (396)
Q Consensus        22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d-~~g~tpLh  100 (396)
                      .....++.|++.|+++.|+.+++..+.+++.. |.+|-|+||.||.+++.+++++|+++|  +++  |..+ .-+.||||
T Consensus        43 ~~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~-D~~g~tlLHWAAiNNrl~v~r~li~~g--adv--n~~gG~l~stPLH  117 (600)
T KOG0509|consen   43 SSLDDIVKATQYGELETVKELVESEGESVNNP-DREGVTLLHWAAINNRLDVARYLISHG--ADV--NAIGGVLGSTPLH  117 (600)
T ss_pred             hhhhhhhhHhhcchHHHHHHHHhhcCcCCCCC-CcCCccceeHHHHcCcHHHHHHHHHcC--CCc--cccCCCCCCCcch
Confidence            34678899999999999999999878899888 889999999999999999999999999  777  7777 67899999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHH
Q 037504          101 YAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETAL  180 (396)
Q Consensus       101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L  180 (396)
                      ||+++|+..+|++|+++|+|   +..+|.+|.||||+|++.|+.-.+-+|+..++                         
T Consensus       118 WAar~G~~~vv~lLlqhGAd---pt~~D~~G~~~lHla~~~~~~~~vayll~~~~-------------------------  169 (600)
T KOG0509|consen  118 WAARNGHISVVDLLLQHGAD---PTLKDKQGLTPLHLAAQFGHTALVAYLLSKGA-------------------------  169 (600)
T ss_pred             HHHHcCcHHHHHHHHHcCCC---CceecCCCCcHHHHHHHhCchHHHHHHHHhcc-------------------------
Confidence            99999999999999999999   55667799999999999999999998887653                         


Q ss_pred             HHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHH
Q 037504          181 HVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFI  260 (396)
Q Consensus       181 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L  260 (396)
                                                                          +++.+|.+|+||||+|+.+|....++.|
T Consensus       170 ----------------------------------------------------d~d~~D~~grTpLmwAaykg~~~~v~~L  197 (600)
T KOG0509|consen  170 ----------------------------------------------------DIDLRDNNGRTPLMWAAYKGFALFVRRL  197 (600)
T ss_pred             ----------------------------------------------------cCCCcCCCCCCHHHHHHHhcccHHHHHH
Confidence                                                                4667788888888888888877768888


Q ss_pred             Hhhcccccccccccc-CCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504          261 FEISSVADLLFDSKD-KDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK  339 (396)
Q Consensus       261 l~~g~~~~~~~n~~d-~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~  339 (396)
                      ++.|+.    ++.+| .+|+||||+|+..|+.+++.++                   +..+++.+.+|.+|+||+++|.+
T Consensus       198 L~f~a~----~~~~d~~~g~TpLHwa~~~gN~~~v~Ll-------------------~~g~~~~d~~~~~g~tp~~LA~~  254 (600)
T KOG0509|consen  198 LKFGAS----LLLTDDNHGNTPLHWAVVGGNLTAVKLL-------------------LEGGADLDKTNTNGKTPFDLAQE  254 (600)
T ss_pred             HHhccc----ccccccccCCchHHHHHhcCCcceEehh-------------------hhcCCcccccccCCCCHHHHHHH
Confidence            888887    66666 7888888888888888887743                   33457778888888888888865


Q ss_pred             H
Q 037504          340 E  340 (396)
Q Consensus       340 ~  340 (396)
                      .
T Consensus       255 ~  255 (600)
T KOG0509|consen  255 R  255 (600)
T ss_pred             h
Confidence            5


No 22 
>PHA03095 ankyrin-like protein; Provisional
Probab=100.00  E-value=1.8e-36  Score=293.41  Aligned_cols=240  Identities=18%  Similarity=0.131  Sum_probs=208.2

Q ss_pred             CCCccccccccCCCcc-cccccchHHHHHHHcC-CHHHHHHHHHhCccccccccCCCCchHHHHHH--HcCCHHHHHHHH
Q 037504            3 HSAPLELHVYSNPPVE-EIRTRRLKLYRVALNG-DWARAKVIYDEHKDEIGDVITRLGDTALHVAA--AANRIDFVKKLV   78 (396)
Q Consensus         3 h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g-~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~--~~g~~~~v~~Ll   78 (396)
                      +.+++++++..+++.. .+..|.||||+|+..| ..++++.|++. |++++.+ +..|.||||+|+  ..++.+++++|+
T Consensus        62 ~~~iv~~Ll~~Gadin~~~~~g~TpLh~A~~~~~~~~iv~lLl~~-ga~in~~-~~~g~tpLh~a~~~~~~~~~iv~~Ll  139 (471)
T PHA03095         62 VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKA-GADVNAK-DKVGRTPLHVYLSGFNINPKVIRLLL  139 (471)
T ss_pred             hHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCcHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHhhCCcCCHHHHHHHH
Confidence            5677888998887666 5778999999999999 59999988875 9999998 999999999999  567899999999


Q ss_pred             HHhhhcccchhcccCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc--CCHHHHHHHHhhc
Q 037504           79 KKMKAENLDLAKRNRIGCTALFYAAASG--SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL--GHTEVVEFLYRET  154 (396)
Q Consensus        79 ~~~~~~~~d~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~--~~~~~v~~Ll~~~  154 (396)
                      +.|  +++  +.+|..|.||||+|+..+  +.+++++|+++|+++.   ..|..|.||||+++..  ++.+++++|++.|
T Consensus       140 ~~g--ad~--~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~---~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g  212 (471)
T PHA03095        140 RKG--ADV--NALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVY---AVDDRFRSLLHHHLQSFKPRARIVRELIRAG  212 (471)
T ss_pred             HcC--CCC--CccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCc---ccCCCCCCHHHHHHHHCCCcHHHHHHHHHcC
Confidence            998  776  999999999999998866  6899999999999954   4477999999999875  7789999999999


Q ss_pred             c-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcc
Q 037504          155 K-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDL  233 (396)
Q Consensus       155 ~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~  233 (396)
                      + .+..+..|             .||||+|+..++.                         ...+++.+     ...+.+
T Consensus       213 ~~~~~~d~~g-------------~tpLh~Aa~~~~~-------------------------~~~~v~~l-----l~~g~d  249 (471)
T PHA03095        213 CDPAATDMLG-------------NTPLHSMATGSSC-------------------------KRSLVLPL-----LIAGIS  249 (471)
T ss_pred             CCCcccCCCC-------------CCHHHHHHhcCCc-------------------------hHHHHHHH-----HHcCCC
Confidence            8 66677777             8999999998721                         11233333     346888


Q ss_pred             cccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccccc
Q 037504          234 IWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVS  298 (396)
Q Consensus       234 i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~  298 (396)
                      +|.+|..|+||||+|+..|+.+++++|+++|++    +|.+|..|+||||+|+..|+.+++..|.
T Consensus       250 in~~d~~g~TpLh~A~~~~~~~~v~~LL~~gad----~n~~~~~g~tpl~~A~~~~~~~~v~~LL  310 (471)
T PHA03095        250 INARNRYGQTPLHYAAVFNNPRACRRLIALGAD----INAVSSDGNTPLSLMVRNNNGRAVRAAL  310 (471)
T ss_pred             CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            999999999999999999999999999999999    8899999999999999999999998874


No 23 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=4.7e-36  Score=290.70  Aligned_cols=264  Identities=14%  Similarity=0.104  Sum_probs=205.8

Q ss_pred             CCccccccccCCCcccccccchHHHHHHHcC--CHHHHHHHHHhCccccccccCCCCchHHHHHHHcC------CHHHHH
Q 037504            4 SAPLELHVYSNPPVEEIRTRRLKLYRVALNG--DWARAKVIYDEHKDEIGDVITRLGDTALHVAAAAN------RIDFVK   75 (396)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g------~~~~v~   75 (396)
                      .+++++|+..+++......|.||||.++..+  +.++|+.||+. |+++|.+ + .+.||||.|+..+      +.++++
T Consensus        16 ~~~v~~LL~~GadvN~~~~g~t~l~~~~~~~~~~~~iv~~Ll~~-GAdvn~~-~-~~~tpL~~a~~~~~~~~~~~~~iv~   92 (494)
T PHA02989         16 KNALEFLLRTGFDVNEEYRGNSILLLYLKRKDVKIKIVKLLIDN-GADVNYK-G-YIETPLCAVLRNREITSNKIKKIVK   92 (494)
T ss_pred             HHHHHHHHHcCCCcccccCCCCHHHHHHhcCCCChHHHHHHHHc-CCCccCC-C-CCCCcHHHHHhccCcchhhHHHHHH
Confidence            3567888888876665467999998766554  68999999985 9999987 4 6799999998754      578999


Q ss_pred             HHHHHhhhcccchhcccCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc--CCHHHHHHH
Q 037504           76 KLVKKMKAENLDLAKRNRIGCTALFYAAAS---GSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL--GHTEVVEFL  150 (396)
Q Consensus        76 ~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~--~~~~~v~~L  150 (396)
                      +|++.|  +++  +.+|..|.||||.|+..   |+.+++++|+++|++++  +.+|..|+||||+|+..  ++.+++++|
T Consensus        93 ~Ll~~G--adi--n~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin--~~~d~~g~tpLh~a~~~~~~~~~iv~~L  166 (494)
T PHA02989         93 LLLKFG--ADI--NLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVN--DVKNSRGYNLLHMYLESFSVKKDVIKIL  166 (494)
T ss_pred             HHHHCC--CCC--CCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcc--cccCCCCCCHHHHHHHhccCCHHHHHHH
Confidence            999999  777  99999999999988765   68999999999999942  45677999999998764  689999999


Q ss_pred             Hhhcc-cCC-CCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHH
Q 037504          151 YRETK-NSL-KDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLF  228 (396)
Q Consensus       151 l~~~~-~~~-~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~  228 (396)
                      ++.|+ ... .+..|             .||||+|++.+..                       ....++++.|++    
T Consensus       167 l~~Gadi~~~~~~~g-------------~tpL~~a~~~~~~-----------------------~~~~~iv~~Ll~----  206 (494)
T PHA02989        167 LSFGVNLFEKTSLYG-------------LTPMNIYLRNDID-----------------------VISIKVIKYLIK----  206 (494)
T ss_pred             HHcCCCccccccccC-------------CChHHHHHhcccc-----------------------cccHHHHHHHHh----
Confidence            99998 332 34455             7899988775411                       113566666553    


Q ss_pred             hCCcccccccCCCCcHHHHHHHcC------cHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhH
Q 037504          229 KYPDLIWKFDENGHTIFHIAVSNR------MREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAAL  302 (396)
Q Consensus       229 ~~~~~i~~~d~~g~t~Lh~A~~~~------~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~  302 (396)
                       .|.+++.+|..|.||||.++..+      ..+++++|+. |++    +|.+|..|+||||+|+..++.+++++|     
T Consensus       207 -~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~ad----vn~~d~~G~TpL~~Aa~~~~~~~v~~L-----  275 (494)
T PHA02989        207 -KGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIK----INKKDKKGFNPLLISAKVDNYEAFNYL-----  275 (494)
T ss_pred             -CCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCC----CCCCCCCCCCHHHHHHHhcCHHHHHHH-----
Confidence             57778888888888888776543      4567776654 577    788888888888888888888877776     


Q ss_pred             hHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          303 QLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       303 ~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                                    +..|++++.+|..|+|||++|.+..
T Consensus       276 --------------L~~Gadin~~d~~G~TpL~~A~~~~  300 (494)
T PHA02989        276 --------------LKLGDDIYNVSKDGDTVLTYAIKHG  300 (494)
T ss_pred             --------------HHcCCCccccCCCCCCHHHHHHHcC
Confidence                          6678888888888888888887643


No 24 
>PHA02989 ankyrin repeat protein; Provisional
Probab=100.00  E-value=6.8e-35  Score=282.64  Aligned_cols=245  Identities=16%  Similarity=0.151  Sum_probs=199.5

Q ss_pred             CCCccccccccCCCcccccccchHHHHHHHcC------CHHHHHHHHHhCccccccccCCCCchHHHHHHHc---CCHHH
Q 037504            3 HSAPLELHVYSNPPVEEIRTRRLKLYRVALNG------DWARAKVIYDEHKDEIGDVITRLGDTALHVAAAA---NRIDF   73 (396)
Q Consensus         3 h~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g------~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~   73 (396)
                      |.+++++|+..+++......+.||||.|+..+      ..++++.|++. |++++.+ |..|.||||.|+..   |+.++
T Consensus        49 ~~~iv~~Ll~~GAdvn~~~~~~tpL~~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~-d~~g~tpL~~a~~~~~~~~~ei  126 (494)
T PHA02989         49 KIKIVKLLIDNGADVNYKGYIETPLCAVLRNREITSNKIKKIVKLLLKF-GADINLK-TFNGVSPIVCFIYNSNINNCDM  126 (494)
T ss_pred             ChHHHHHHHHcCCCccCCCCCCCcHHHHHhccCcchhhHHHHHHHHHHC-CCCCCCC-CCCCCcHHHHHHHhcccCcHHH
Confidence            56889999999988775556899999998765      46789988875 9999998 99999999988765   68999


Q ss_pred             HHHHHHHhhhcccchhcccCCCCcHHHHHHHc--CCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcC----CHHHH
Q 037504           74 VKKLVKKMKAENLDLAKRNRIGCTALFYAAAS--GSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLG----HTEVV  147 (396)
Q Consensus        74 v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~--g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~----~~~~v  147 (396)
                      +++|+++|  ++++ +.+|..|+||||+|+..  ++.+++++|+++|++++..  .+..|.||||+|+..+    +.+++
T Consensus       127 v~~Ll~~G--adin-~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~--~~~~g~tpL~~a~~~~~~~~~~~iv  201 (494)
T PHA02989        127 LRFLLSKG--INVN-DVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEK--TSLYGLTPMNIYLRNDIDVISIKVI  201 (494)
T ss_pred             HHHHHHCC--CCcc-cccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccc--ccccCCChHHHHHhcccccccHHHH
Confidence            99999998  5540 57899999999998764  6899999999999995432  4568999999998764    89999


Q ss_pred             HHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHH
Q 037504          148 EFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENF  226 (396)
Q Consensus       148 ~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l  226 (396)
                      ++|++.|+ .+..+..+             .+|||.++..+...                     .....+++++++   
T Consensus       202 ~~Ll~~Ga~vn~~~~~~-------------~t~l~~~~~~~~~~---------------------~~~~~~il~~l~---  244 (494)
T PHA02989        202 KYLIKKGVNIETNNNGS-------------ESVLESFLDNNKIL---------------------SKKEFKVLNFIL---  244 (494)
T ss_pred             HHHHhCCCCccccCCcc-------------ccHHHHHHHhchhh---------------------cccchHHHHHHH---
Confidence            99999998 44455455             67777766543110                     011234444332   


Q ss_pred             HHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccccc
Q 037504          227 LFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVS  298 (396)
Q Consensus       227 l~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~  298 (396)
                         .+.++|.+|..|+||||+|+..|+.+++++|+++|++    +|.+|..|+||||+|+..++.++++.|.
T Consensus       245 ---~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gad----in~~d~~G~TpL~~A~~~~~~~iv~~LL  309 (494)
T PHA02989        245 ---KYIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDD----IYNVSKDGDTVLTYAIKHGNIDMLNRIL  309 (494)
T ss_pred             ---hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHHHH
Confidence               2478999999999999999999999999999999999    8999999999999999999999888763


No 25 
>PHA02875 ankyrin repeat protein; Provisional
Probab=100.00  E-value=1.6e-34  Score=274.85  Aligned_cols=233  Identities=15%  Similarity=0.116  Sum_probs=200.7

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK   80 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~   80 (396)
                      ||.+++++|+..+++.. .+..|.||||+|+..|+.++++.|++. |++++.. +..+.||||+|+..|+.+++++|++.
T Consensus        13 g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~   90 (413)
T PHA02875         13 GELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKH-GAIPDVK-YPDIESELHDAVEEGDVKAVEELLDL   90 (413)
T ss_pred             CCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcccc-CCCcccHHHHHHHCCCHHHHHHHHHc
Confidence            67888999998876554 456899999999999999999999985 8888776 78899999999999999999999999


Q ss_pred             hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCC
Q 037504           81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLK  159 (396)
Q Consensus        81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~  159 (396)
                      |  ... .+..+..|.||||+|+..|+.+++++|+++|++   ++.++..|.||||+|+..|+.+++++|++.++ .+..
T Consensus        91 ~--~~~-~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad---~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~  164 (413)
T PHA02875         91 G--KFA-DDVFYKDGMTPLHLATILKKLDIMKLLIARGAD---PDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIE  164 (413)
T ss_pred             C--Ccc-cccccCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCC
Confidence            8  443 245677899999999999999999999999999   45566789999999999999999999999998 5566


Q ss_pred             CcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC
Q 037504          160 DDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE  239 (396)
Q Consensus       160 ~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~  239 (396)
                      +..|             .||||+|+..|                           ..++++.+++     .+.+++..+.
T Consensus       165 d~~g-------------~TpL~~A~~~g---------------------------~~eiv~~Ll~-----~ga~~n~~~~  199 (413)
T PHA02875        165 DCCG-------------CTPLIIAMAKG---------------------------DIAICKMLLD-----SGANIDYFGK  199 (413)
T ss_pred             CCCC-------------CCHHHHHHHcC---------------------------CHHHHHHHHh-----CCCCCCcCCC
Confidence            7777             89999999988                           3677776654     5788888888


Q ss_pred             CC-CcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504          240 NG-HTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL  288 (396)
Q Consensus       240 ~g-~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~  288 (396)
                      .| .||+|+|+..|+.+++++|+++|++.++ ++..+.+|.|||++++..
T Consensus       200 ~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~-~~~~~~~~~t~l~~~~~~  248 (413)
T PHA02875        200 NGCVAALCYAIENNKIDIVRLFIKRGADCNI-MFMIEGEECTILDMICNM  248 (413)
T ss_pred             CCCchHHHHHHHcCCHHHHHHHHHCCcCcch-HhhcCCCchHHHHHHHhh
Confidence            77 5899999999999999999999999654 344578899999988654


No 26 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=5.9e-35  Score=282.72  Aligned_cols=271  Identities=17%  Similarity=0.178  Sum_probs=187.9

Q ss_pred             ccccccccCCCcccccccchHHHHHHH--cCCHHHHHHHHHhCccccccccCCCCchHHHHHHHc-----CCHHHHHHHH
Q 037504            6 PLELHVYSNPPVEEIRTRRLKLYRVAL--NGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAA-----NRIDFVKKLV   78 (396)
Q Consensus         6 ~~~~~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~-----g~~~~v~~Ll   78 (396)
                      .+++++....+.+. ..|.|+++.+..  .++.++|+.|++. |++++.. |..|.||||.|+..     ++.+++++|+
T Consensus        20 ~v~~ll~~~~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~-Gadvn~~-d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll   96 (489)
T PHA02798         20 TVKLLIKSCNPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINL-GANVNGL-DNEYSTPLCTILSNIKDYKHMLDIVKILI   96 (489)
T ss_pred             HHHHHHhcCChhhh-cccchHHHHHHhCCCCCHHHHHHHHHC-CCCCCCC-CCCCCChHHHHHHhHHhHHhHHHHHHHHH
Confidence            45566654433332 446676654443  3478888888874 8888887 88888888888764     6688888888


Q ss_pred             HHhhhcccchhcccCCCCcHHHHHHHcC---CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCC---HHHHHHHHh
Q 037504           79 KKMKAENLDLAKRNRIGCTALFYAAASG---SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGH---TEVVEFLYR  152 (396)
Q Consensus        79 ~~~~~~~~d~~~~d~~g~tpLh~A~~~g---~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~---~~~v~~Ll~  152 (396)
                      +.|  +++  |.+|..|+||||+|+..+   +.+++++|+++|++   ++.+|..|.||||+|+..++   .+++++|++
T Consensus        97 ~~G--adi--N~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gad---vn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~  169 (489)
T PHA02798         97 ENG--ADI--NKKNSDGETPLYCLLSNGYINNLEILLFMIENGAD---TTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLE  169 (489)
T ss_pred             HCC--CCC--CCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCC---ccccCCCCCcHHHHHHHcCCcchHHHHHHHHH
Confidence            887  766  888888888888888875   67888888888888   55667788888888888887   888888888


Q ss_pred             hcc-cCCC-CcchhHHHHHHhhcc---chhhHHHHHHhcCCCCCCCCCcchhh---hhhhccchhhhhHHHHHHHHHHHH
Q 037504          153 ETK-NSLK-DDDCIELLVKLIETD---SYETALHVLARKNLTSSNQNPRGIFQ---RYFNLGAKAVENERALELVELLWE  224 (396)
Q Consensus       153 ~~~-~~~~-~~~g~~~l~~~~~~~---~~~t~L~~a~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ll~  224 (396)
                      .|+ .+.. +..|.+++|.+....   .....+.+...+|.........+...   .+.....  .......+++..+  
T Consensus       170 ~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~--~~~~~~~~i~~~l--  245 (489)
T PHA02798        170 KGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLY--DNKRFKKNILDFI--  245 (489)
T ss_pred             hCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHh--hcccchHHHHHHH--
Confidence            887 3333 346778887665432   11234445555553211111110000   0000000  0000112233222  


Q ss_pred             HHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccccc
Q 037504          225 NFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVS  298 (396)
Q Consensus       225 ~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~  298 (396)
                         .. +.++|.+|..|+||||+|+.+|+.+++++|+++|++    +|.+|..|+||||+|+..++.+++..|.
T Consensus       246 ---~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAd----in~~d~~G~TpL~~A~~~~~~~iv~~lL  311 (489)
T PHA02798        246 ---FS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGD----INIITELGNTCLFTAFENESKFIFNSIL  311 (489)
T ss_pred             ---Hh-cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCc----ccccCCCCCcHHHHHHHcCcHHHHHHHH
Confidence               22 478999999999999999999999999999999999    8999999999999999999998888773


No 27 
>PHA02798 ankyrin-like protein; Provisional
Probab=100.00  E-value=4.8e-35  Score=283.33  Aligned_cols=250  Identities=16%  Similarity=0.138  Sum_probs=187.9

Q ss_pred             CHHHHHHHHHhCccccccccCCCCchHHHHHHH--cCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHc-----CC
Q 037504           35 DWARAKVIYDEHKDEIGDVITRLGDTALHVAAA--ANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAAS-----GS  107 (396)
Q Consensus        35 ~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~-----g~  107 (396)
                      ..+.|+.|++. + +++..  ..|.|+++.+..  .++.++|++|++.|  +++  +.+|..|.||||+|+..     ++
T Consensus        17 ~~~~v~~ll~~-~-~~~~~--~~~~~~~~~yl~~~~~~~~iv~~Ll~~G--adv--n~~d~~g~TpL~~~~~n~~~~~~~   88 (489)
T PHA02798         17 KLSTVKLLIKS-C-NPNEI--VNEYSIFQKYLQRDSPSTDIVKLFINLG--ANV--NGLDNEYSTPLCTILSNIKDYKHM   88 (489)
T ss_pred             cHHHHHHHHhc-C-Chhhh--cccchHHHHHHhCCCCCHHHHHHHHHCC--CCC--CCCCCCCCChHHHHHHhHHhHHhH
Confidence            36789999964 3 34433  457787764443  45899999999999  777  99999999999999864     67


Q ss_pred             HHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcC---CHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHH
Q 037504          108 VELVKATMEGNEDITMVPQDDKDRMLPIVGAASLG---HTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVL  183 (396)
Q Consensus       108 ~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~---~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a  183 (396)
                      .+++++|+++|++   ++.+|..|.||||+|+..+   +.+++++|++.|+ .+..+.+|.             ||||+|
T Consensus        89 ~~iv~~Ll~~Gad---iN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~-------------tpL~~a  152 (489)
T PHA02798         89 LDIVKILIENGAD---INKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGF-------------TMLQVY  152 (489)
T ss_pred             HHHHHHHHHCCCC---CCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCC-------------cHHHHH
Confidence            9999999999999   6667889999999999875   7899999999999 677888884             555555


Q ss_pred             HhcCCCCCCCCCcchhhhhhhccch----------hhhh--------HHHHHHHHHHHHHHHHhCCcccccccCCCCcHH
Q 037504          184 ARKNLTSSNQNPRGIFQRYFNLGAK----------AVEN--------ERALELVELLWENFLFKYPDLIWKFDENGHTIF  245 (396)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~--------~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~L  245 (396)
                      ++.++.    ...+.++.+.+.+..          ++.|        ....+++++++     ..|..++..+..|.+++
T Consensus       153 ~~~~~~----~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li-----~~Ga~i~~~~~~~~~~~  223 (489)
T PHA02798        153 LQSNHH----IDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFV-----DNGFIINKENKSHKKKF  223 (489)
T ss_pred             HHcCCc----chHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHH-----HCCCCcccCCccccchH
Confidence            544420    001122222221111          0001        11245666555     46788888888899987


Q ss_pred             H-------HHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhc
Q 037504          246 H-------IAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVV  318 (396)
Q Consensus       246 h-------~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~  318 (396)
                      +       ++...++.+++.+|+. +++    +|.+|..|+||||+|+..++.+++++|                   +.
T Consensus       224 ~~~l~~l~~~~~~~~~~i~~~l~~-~~d----vN~~d~~G~TPL~~A~~~~~~~~v~~L-------------------L~  279 (489)
T PHA02798        224 MEYLNSLLYDNKRFKKNILDFIFS-YID----INQVDELGFNPLYYSVSHNNRKIFEYL-------------------LQ  279 (489)
T ss_pred             HHHHHHHHhhcccchHHHHHHHHh-cCC----CCCcCcCCccHHHHHHHcCcHHHHHHH-------------------HH
Confidence            7       2345567788888766 577    899999999999999999999988887                   77


Q ss_pred             chhhhhhhcCCCCCchhhHHHHh
Q 037504          319 PRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       319 ~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      .|++++.+|..|+|||++|.+..
T Consensus       280 ~GAdin~~d~~G~TpL~~A~~~~  302 (489)
T PHA02798        280 LGGDINIITELGNTCLFTAFENE  302 (489)
T ss_pred             cCCcccccCCCCCcHHHHHHHcC
Confidence            99999999999999999998754


No 28 
>PHA02878 ankyrin repeat protein; Provisional
Probab=100.00  E-value=2.7e-34  Score=277.63  Aligned_cols=235  Identities=17%  Similarity=0.118  Sum_probs=194.4

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHH-
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVK-   79 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~-   79 (396)
                      ||.+++++|+..+++.. .+..|.||||+||..|+.+.++.|+.. +....   ...+.+||+.|+..|+.++++.|+. 
T Consensus        48 g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-~~~~~---~~~~~~~l~~a~~~~~~ei~~~Ll~~  123 (477)
T PHA02878         48 RNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRS-INKCS---VFYTLVAIKDAFNNRNVEIFKIILTN  123 (477)
T ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHH-Hhccc---cccchhhHHHHHHcCCHHHHHHHHhC
Confidence            67788999998886654 688899999999999999999999986 33222   2567899999999988776666554 


Q ss_pred             --------------------------------HhhhcccchhcccCC-CCcHHHHHHHcCCHHHHHHHHhcCCCCccccC
Q 037504           80 --------------------------------KMKAENLDLAKRNRI-GCTALFYAAASGSVELVKATMEGNEDITMVPQ  126 (396)
Q Consensus        80 --------------------------------~~~~~~~d~~~~d~~-g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~  126 (396)
                                                      .|  +++  +.+|.. |.||||+|+..|+.+++++|+++|++   ++.
T Consensus       124 ~~~~~~~~~~~~~~~~~~~~~~~~~iv~~Ll~~g--adi--n~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad---~n~  196 (477)
T PHA02878        124 RYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYG--ADI--NMKDRHKGNTALHYATENKDQRLTELLLSYGAN---VNI  196 (477)
T ss_pred             cccCcccCcHHHHhhccchhhHHHHHHHHHHHcC--CCC--CccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCC---CCC
Confidence                                            33  444  888888 99999999999999999999999999   556


Q ss_pred             CCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhc
Q 037504          127 DDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNL  205 (396)
Q Consensus       127 ~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~  205 (396)
                      .|..|.||||+|+..|+.+++++|++.|+ .+..+..|             .||||+|+..+.                 
T Consensus       197 ~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g-------------~TpLh~A~~~~~-----------------  246 (477)
T PHA02878        197 PDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCG-------------NTPLHISVGYCK-----------------  246 (477)
T ss_pred             cCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCC-------------CCHHHHHHHhcC-----------------
Confidence            67799999999999999999999999998 66677777             899999997531                 


Q ss_pred             cchhhhhHHHHHHHHHHHHHHHHhCCcccccccC-CCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhh
Q 037504          206 GAKAVENERALELVELLWENFLFKYPDLIWKFDE-NGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHL  284 (396)
Q Consensus       206 ~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~  284 (396)
                               ..++++.+++     .+.+++.++. .|+||||+|  .++.+++++|+++|++    +|.+|..|+||||+
T Consensus       247 ---------~~~iv~~Ll~-----~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gad----in~~d~~g~TpL~~  306 (477)
T PHA02878        247 ---------DYDILKLLLE-----HGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGAD----INSLNSYKLTPLSS  306 (477)
T ss_pred             ---------CHHHHHHHHH-----cCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCC----CCCcCCCCCCHHHH
Confidence                     3566766654     5788888875 899999999  5678999999999999    89999999999999


Q ss_pred             hhcCC-CCCccccc
Q 037504          285 AGKLP-PLNRLNIV  297 (396)
Q Consensus       285 A~~~~-~~~~~~~l  297 (396)
                      |+..+ ..++.++|
T Consensus       307 A~~~~~~~~~~~~l  320 (477)
T PHA02878        307 AVKQYLCINIGRIL  320 (477)
T ss_pred             HHHHcCccchHHHH
Confidence            99754 34444443


No 29 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=9.3e-34  Score=272.06  Aligned_cols=263  Identities=14%  Similarity=0.052  Sum_probs=181.2

Q ss_pred             CCcccccccchHHHHHHHcC---CHHHHHHHHHhCccccccccCCCCchHHHHHHHcC--CHHHHHHHHHHhhhcccchh
Q 037504           15 PPVEEIRTRRLKLYRVALNG---DWARAKVIYDEHKDEIGDVITRLGDTALHVAAAAN--RIDFVKKLVKKMKAENLDLA   89 (396)
Q Consensus        15 ~~~~~~~~g~t~Lh~A~~~g---~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~d~~   89 (396)
                      .+-.+|..|.||||+|+..|   +.++|+.||+ +|++++.+ |..|+||||+|+..+  +.|+|++|++.|  ++.+.+
T Consensus        33 in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs-~GAdin~k-D~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~--~~~~~~  108 (672)
T PHA02730         33 LSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLS-RGVERLCR-NNEGLTPLGVYSKRKYVKSQIVHLLISSY--SNASNE  108 (672)
T ss_pred             hhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHh-CCCCCccc-CCCCCChHHHHHHcCCCcHHHHHHHHhcC--CCCCcc
Confidence            33457788999999999997   5999999996 59999998 999999999999977  799999999998  544447


Q ss_pred             cccCCCCcHHHHHHH--cCCHHHHHHHHh-cCCCCccccC-CC-CCCCcHHHHHHhcCCHHHHHHHHhhcc-cC------
Q 037504           90 KRNRIGCTALFYAAA--SGSVELVKATME-GNEDITMVPQ-DD-KDRMLPIVGAASLGHTEVVEFLYRETK-NS------  157 (396)
Q Consensus        90 ~~d~~g~tpLh~A~~--~g~~~~v~~Ll~-~g~~~~~~~~-~d-~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~------  157 (396)
                      ..+..+.+|||.++.  +++.+++++|++ .+.+++.... .+ ..|.+|++++...++.++|++|++.|+ +.      
T Consensus       109 ~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~  188 (672)
T PHA02730        109 LTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRS  188 (672)
T ss_pred             cccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCccccccccc
Confidence            788888899998888  889999999996 6667543322 11 268899999999999999999999998 31      


Q ss_pred             --CCCcchhHHHHHHh-h-------------------------ccchhhHHHHHHh--cCCCCCC---------------
Q 037504          158 --LKDDDCIELLVKLI-E-------------------------TDSYETALHVLAR--KNLTSSN---------------  192 (396)
Q Consensus       158 --~~~~~g~~~l~~~~-~-------------------------~~~~~t~L~~a~~--~~~~~~~---------------  192 (396)
                        ...+.+.+.|+..+ .                         +..|.||||++..  .++.+..               
T Consensus       189 ~~~~~~~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~  268 (672)
T PHA02730        189 CMYDSDRCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDD  268 (672)
T ss_pred             ccccCCccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhcccccccccc
Confidence              22233445555222 2                         1234899986332  2222000               


Q ss_pred             -----------------------CCCcchhhhhhhccchh------------hh-h--------HH----HHHHHHHH--
Q 037504          193 -----------------------QNPRGIFQRYFNLGAKA------------VE-N--------ER----ALELVELL--  222 (396)
Q Consensus       193 -----------------------~~~~~~~~~~~~~~~~~------------~~-~--------~~----~~~~~~~l--  222 (396)
                                             .....+++.+.+.+.+.            .. .        ..    ...+++.+  
T Consensus       269 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~  348 (672)
T PHA02730        269 ISQPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLI  348 (672)
T ss_pred             ccchhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHH
Confidence                                   00011111122111110            00 0        00    00111111  


Q ss_pred             ------------HHHHHHhCCcccccccCCCCcHHHHHHHcCc----HHHHHHHHhhccccccccccccCCCCchhhh
Q 037504          223 ------------WENFLFKYPDLIWKFDENGHTIFHIAVSNRM----REIFKFIFEISSVADLLFDSKDKDGNNILHL  284 (396)
Q Consensus       223 ------------l~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~----~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~  284 (396)
                                  +-++|..+|+++|.. ..|.||||+|+..++    .+++++|+++|++.+  +|.+|..|.||||.
T Consensus       349 ~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~d--IN~kd~~G~T~Lh~  423 (672)
T PHA02730        349 NYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMA--INHVSNNGRLCMYG  423 (672)
T ss_pred             HHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCcc--ccccccCCCchHhH
Confidence                        123445678999985 799999999998875    899999999998433  78999999999994


No 30 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=100.00  E-value=2.5e-34  Score=254.96  Aligned_cols=142  Identities=26%  Similarity=0.361  Sum_probs=119.9

Q ss_pred             CCCCccccccccCCCccccc-ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504            2 AHSAPLELHVYSNPPVEEIR-TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK   80 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~~~~-~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~   80 (396)
                      ||.+++++|+..++.+.... ...|||--||..|+.++||+|++ +++|++.. |..|.|+||+||..|+.+++++|++.
T Consensus        95 GHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE-~gad~~Ia-nrhGhTcLmIa~ykGh~~I~qyLle~  172 (615)
T KOG0508|consen   95 GHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVE-HGADPEIA-NRHGHTCLMIACYKGHVDIAQYLLEQ  172 (615)
T ss_pred             CcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHH-cCCCCccc-ccCCCeeEEeeeccCchHHHHHHHHh
Confidence            78888999988887766544 34589999999999999999986 48888888 88999999999999999999999998


Q ss_pred             hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhh
Q 037504           81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRE  153 (396)
Q Consensus        81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~  153 (396)
                      |  +++  |.++..|+|+||.|+..|+++++++|+.+|+.+.    .|..|.|||..|+..|+.++|++|++.
T Consensus       173 g--ADv--n~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~----~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  173 G--ADV--NAKSYKGNTALHDCAESGSVDIVQLLLKHGAKID----VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             C--CCc--chhcccCchHHHhhhhcccHHHHHHHHhCCceee----ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            8  776  8899999999999999999999999999988753    256799999999999999999988853


No 31 
>PHA02730 ankyrin-like protein; Provisional
Probab=100.00  E-value=6.8e-33  Score=266.12  Aligned_cols=306  Identities=11%  Similarity=0.020  Sum_probs=201.4

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHHcC--CHHHHHHHHHhC-ccccccccCCCCchHHHHHHH--cCCHHHHH
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNG--DWARAKVIYDEH-KDEIGDVITRLGDTALHVAAA--ANRIDFVK   75 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g--~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~A~~--~g~~~~v~   75 (396)
                      +|.+++++|+..+++.. +|..|.||||+|+..|  +.++|+.|++.. +++++.. +..+++|||.++.  .++.++|+
T Consensus        55 ~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~-~~~~d~~l~~y~~s~n~~~~~vk  133 (672)
T PHA02730         55 TDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELT-SNINDFDLYSYMSSDNIDLRLLK  133 (672)
T ss_pred             CcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCcccc-cccCCchHHHHHHhcCCcHHHHH
Confidence            46789999999998766 7889999999999977  799999999762 3444655 6778889888888  78889999


Q ss_pred             HHHHHhhhcccchhccc-----CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccc----cCCCCCCCcH-HHHH------H
Q 037504           76 KLVKKMKAENLDLAKRN-----RIGCTALFYAAASGSVELVKATMEGNEDITMV----PQDDKDRMLP-IVGA------A  139 (396)
Q Consensus        76 ~Ll~~~~~~~~d~~~~d-----~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~----~~~d~~g~tp-Lh~A------~  139 (396)
                      +|++.+ ..++  +...     ..|.+|+++++..++.++|++|+++|++++-.    ...|..+.+| ||++      .
T Consensus       134 ~Li~~~-~~~~--~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~~c~~~l~~~il~~~~~  210 (672)
T PHA02730        134 YLIVDK-RIRP--SKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSDRCKNSLHYYILSHRES  210 (672)
T ss_pred             HHHHhc-CCCh--hhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCCccchhHHHHHHhhhhh
Confidence            999633 1333  3332     26788888888888888888888888885311    1223334433 3322      2


Q ss_pred             hcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccch-hhHHHHHHh--------------------------------
Q 037504          140 SLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSY-ETALHVLAR--------------------------------  185 (396)
Q Consensus       140 ~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~-~t~L~~a~~--------------------------------  185 (396)
                      ..++.+++++|+++|+ .+.++.+|+||||.......+ .....+..+                                
T Consensus       211 ~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (672)
T PHA02730        211 ESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYIRGVLADYLNKRFRVTP  290 (672)
T ss_pred             hccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhhhhhHHHhhhhhhhccc
Confidence            3456677777777776 455666777777632211100 000000000                                


Q ss_pred             -------------cCCC--------------------------------------------CCC-CCCcchhhhhhhccc
Q 037504          186 -------------KNLT--------------------------------------------SSN-QNPRGIFQRYFNLGA  207 (396)
Q Consensus       186 -------------~~~~--------------------------------------------~~~-~~~~~~~~~~~~~~~  207 (396)
                                   .+..                                            ... ....++++.+.+.|+
T Consensus       291 ~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GA  370 (672)
T PHA02730        291 YNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGA  370 (672)
T ss_pred             CCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCC
Confidence                         0000                                            000 011122222222222


Q ss_pred             h--------hhhhHH--------HHHHHHHHHHHHHHhCCc--ccccccCCCCcHHHH---HHHcC---------cHHHH
Q 037504          208 K--------AVENER--------ALELVELLWENFLFKYPD--LIWKFDENGHTIFHI---AVSNR---------MREIF  257 (396)
Q Consensus       208 ~--------~~~~~~--------~~~~~~~ll~~ll~~~~~--~i~~~d~~g~t~Lh~---A~~~~---------~~~~v  257 (396)
                      .        ++.|..        ..++++.|++     .++  +++.+|.+|.||||.   |...+         ..+++
T Consensus       371 dIN~k~~G~TpLH~Aa~~nnn~i~~eIvelLIs-----~Ga~~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~iv  445 (672)
T PHA02730        371 TMDKTTDNNYPLHDYFVNNNNIVDVNVVRFIVE-----NNGHMAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVF  445 (672)
T ss_pred             CCCcCCCCCcHHHHHHHHcCCcchHHHHHHHHH-----cCCCccccccccCCCchHhHHHHHHhccccccccchhHHHHH
Confidence            2        122211        1455655553     444  689999999999994   33332         23579


Q ss_pred             HHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcC-CCCCchhh
Q 037504          258 KFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNN-DGLTPGDL  336 (396)
Q Consensus       258 ~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~-~g~tpl~~  336 (396)
                      ++|+++|++    +|.+|..|+||||+|+..++.+++++|                   +.+|++++.+|+ .|.||+++
T Consensus       446 k~LIs~GAD----INakD~~G~TPLh~Aa~~~~~eive~L-------------------I~~GAdIN~~d~~~g~TaL~~  502 (672)
T PHA02730        446 DILSKYMDD----IDMIDNENKTLLYYAVDVNNIQFARRL-------------------LEYGASVNTTSRSIINTAIQK  502 (672)
T ss_pred             HHHHhcccc----hhccCCCCCCHHHHHHHhCCHHHHHHH-------------------HHCCCCCCCCCCcCCcCHHHH
Confidence            999999999    999999999999999999998888887                   779999999997 59999999


Q ss_pred             HHH
Q 037504          337 FIK  339 (396)
Q Consensus       337 a~~  339 (396)
                      |..
T Consensus       503 Aa~  505 (672)
T PHA02730        503 SSY  505 (672)
T ss_pred             HHH
Confidence            976


No 32 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=100.00  E-value=5.2e-34  Score=283.87  Aligned_cols=310  Identities=20%  Similarity=0.194  Sum_probs=202.3

Q ss_pred             CCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHh
Q 037504            3 HSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKM   81 (396)
Q Consensus         3 h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~   81 (396)
                      +..++++++..+..+. .+..|.+|||.|+..|+.++++.++.. ++.++.. +..|.||||.|+..+..+++++|++.|
T Consensus       221 ri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~-ga~~~~~-~vr~~tplh~AA~~~~~e~~~~ll~~g  298 (1143)
T KOG4177|consen  221 RIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQH-GASVNVS-TVRGETPLHMAARAGQVEVCKLLLQNG  298 (1143)
T ss_pred             ccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhc-ccccCcc-cccccCcchhhhccchhhhHhhhhccC
Confidence            4456677777766555 677788888888888888888887764 7778777 888888888888888888888888876


Q ss_pred             hhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcc------------------------------ccCCCCCC
Q 037504           82 KAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITM------------------------------VPQDDKDR  131 (396)
Q Consensus        82 ~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~------------------------------~~~~d~~g  131 (396)
                        +++  ..++....||+|.|.+.|+.++++++++.++.++.                              ....+..|
T Consensus       299 --a~~--~~~~~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a~~k~  374 (1143)
T KOG4177|consen  299 --ADV--LAKARDDQTPLHIASRLGHEEIVHLLLQAGATPNAARTAGYTPLHLAAKEGQVEVAGALLEHGAQRRQAEEKG  374 (1143)
T ss_pred             --ccc--ccccccccChhhhhcccchHHHHHHHhhccCCccccCcCCcccccHhhhhhhHHHHHHhhccccccCcccccC
Confidence              444  44444444444444444444444444444333110                              22233456


Q ss_pred             CcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccc--------------------hhhHHHHHHhcCC-C
Q 037504          132 MLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDS--------------------YETALHVLARKNL-T  189 (396)
Q Consensus       132 ~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~--------------------~~t~L~~a~~~~~-~  189 (396)
                      +||+|.|+.+|..+++++++..++ .+.....|.+++|.+...+.                    |.||+|+|+..|. .
T Consensus       375 ~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~  454 (1143)
T KOG4177|consen  375 FTPLHLAVKSGRVSVVELLLEAGADPNSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYL  454 (1143)
T ss_pred             CcchhhhcccCchhHHHhhhhccCCcccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHh
Confidence            666666666666666666666666 45555566666654433211                    2666666666651 1


Q ss_pred             CCCC------------C--------------Ccchhhhhhhcc--------c-hhhhhHHHHHHHHHHHHHHHHhCCccc
Q 037504          190 SSNQ------------N--------------PRGIFQRYFNLG--------A-KAVENERALELVELLWENFLFKYPDLI  234 (396)
Q Consensus       190 ~~~~------------~--------------~~~~~~~~~~~~--------~-~~~~~~~~~~~~~~ll~~ll~~~~~~i  234 (396)
                      ....            .              ..+.+..+.+..        . ....|.....-..... ..+...+..+
T Consensus       455 ~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~-~~l~~~ga~v  533 (1143)
T KOG4177|consen  455 QIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVA-KILLEHGANV  533 (1143)
T ss_pred             hhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHH-HHHhhcCCce
Confidence            0000            0              000011111110        0 0001111111111111 1335678889


Q ss_pred             ccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHH
Q 037504          235 WKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEV  314 (396)
Q Consensus       235 ~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v  314 (396)
                      +.++..|.||||+|+.+|+.++|++|+++|++    ++.+|+.|+||||.||..|+.+++.+|                 
T Consensus       534 ~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAd----v~ak~~~G~TPLH~Aa~~G~~~i~~LL-----------------  592 (1143)
T KOG4177|consen  534 DLRTGRGYTPLHVAVHYGNVDLVKFLLEHGAD----VNAKDKLGYTPLHQAAQQGHNDIAELL-----------------  592 (1143)
T ss_pred             ehhcccccchHHHHHhcCCchHHHHhhhCCcc----ccccCCCCCChhhHHHHcChHHHHHHH-----------------
Confidence            99999999999999999999999999999999    899999999999999999999988887                 


Q ss_pred             hhhcchhhhhhhcCCCCCchhhHHHHhH
Q 037504          315 KKVVPRKFAEEKNNDGLTPGDLFIKEHE  342 (396)
Q Consensus       315 ~~l~~~~~~~~~~~~g~tpl~~a~~~~~  342 (396)
                        +.+|+++|..|.+|.|||++|.....
T Consensus       593 --lk~GA~vna~d~~g~TpL~iA~~lg~  618 (1143)
T KOG4177|consen  593 --LKHGASVNAADLDGFTPLHIAVRLGY  618 (1143)
T ss_pred             --HHcCCCCCcccccCcchhHHHHHhcc
Confidence              77999999999999999999987543


No 33 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97  E-value=1.2e-30  Score=223.20  Aligned_cols=176  Identities=14%  Similarity=0.150  Sum_probs=136.5

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcC--CHHHHHHHHHHhhhcccchhccc-CCCCc
Q 037504           21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAAN--RIDFVKKLVKKMKAENLDLAKRN-RIGCT   97 (396)
Q Consensus        21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g--~~~~v~~Ll~~~~~~~~d~~~~d-~~g~t   97 (396)
                      ..+.||||.|+..|+.++|+.|++.    ++.. |..|.||||+|+..+  +.+++++|++.|  +++  +.++ ..|.|
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~----~n~~-~~~g~TpLh~a~~~~~~~~eiv~~Ll~~g--adv--n~~~~~~g~T   89 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKF----VNDC-NDLYETPIFSCLEKDKVNVEILKFLIENG--ADV--NFKTRDNNLS   89 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHh----hhcc-CccCCCHHHHHHHcCCCCHHHHHHHHHCC--CCC--CccCCCCCCC
Confidence            3457888888888888888888753    3444 777888888888754  788888888877  666  7776 46888


Q ss_pred             HHHHHHHc---CCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHh--cCCHHHHHHHHhhcccCCCCcchhHHHHHHhh
Q 037504           98 ALFYAAAS---GSVELVKATMEGNEDITMVPQDDKDRMLPIVGAAS--LGHTEVVEFLYRETKNSLKDDDCIELLVKLIE  172 (396)
Q Consensus        98 pLh~A~~~---g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~--~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~  172 (396)
                      |||+|+..   ++.+++++|+++|++   ++.+|..|.||||+|+.  .++.+++++|++.|+                 
T Consensus        90 pLh~a~~~~~~~~~eiv~~Ll~~gad---in~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~ga-----------------  149 (209)
T PHA02859         90 ALHHYLSFNKNVEPEILKILIDSGSS---ITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGV-----------------  149 (209)
T ss_pred             HHHHHHHhCccccHHHHHHHHHCCCC---CCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCC-----------------
Confidence            88887653   467888888888888   45566678888888765  356777777775543                 


Q ss_pred             ccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHH-HHHc
Q 037504          173 TDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHI-AVSN  251 (396)
Q Consensus       173 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~-A~~~  251 (396)
                                                                                  +++.+|.+|.||||. |+..
T Consensus       150 ------------------------------------------------------------din~~d~~g~t~Lh~~a~~~  169 (209)
T PHA02859        150 ------------------------------------------------------------SFLNKDFDNNNILYSYILFH  169 (209)
T ss_pred             ------------------------------------------------------------CcccccCCCCcHHHHHHHhc
Confidence                                                                        466788899999995 5667


Q ss_pred             CcHHHHHHHHhhccccccccccccCCCCchhhhhhcCC
Q 037504          252 RMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLP  289 (396)
Q Consensus       252 ~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~  289 (396)
                      ++.+++++|+++|++    ++.+|..|.||||+|..++
T Consensus       170 ~~~~iv~~Ll~~Gad----i~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        170 SDKKIFDFLTSLGID----INETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             CCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhhh
Confidence            899999999999999    8899999999999998765


No 34 
>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]
Probab=99.97  E-value=3.3e-32  Score=271.06  Aligned_cols=259  Identities=23%  Similarity=0.272  Sum_probs=222.9

Q ss_pred             ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504           18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT   97 (396)
Q Consensus        18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t   97 (396)
                      ..+..|.||+|.|+..|..+.++.++.+ +.+++.. ++.|.||||.|+..++..+|+.+++.+  ++.  +..+..|+|
T Consensus       369 ~a~~k~~~pl~la~~~g~~~~v~Lll~~-ga~~~~~-gk~gvTplh~aa~~~~~~~v~l~l~~g--A~~--~~~~~lG~T  442 (1143)
T KOG4177|consen  369 QAEEKGFTPLHLAVKSGRVSVVELLLEA-GADPNSA-GKNGVTPLHVAAHYGNPRVVKLLLKRG--ASP--NAKAKLGYT  442 (1143)
T ss_pred             cccccCCcchhhhcccCchhHHHhhhhc-cCCcccC-CCCCcceeeehhhccCcceEEEEeccC--CCh--hhHhhcCCC
Confidence            3577889999999999999999888876 8888888 899999999999999999999999988  776  889999999


Q ss_pred             HHHHHHHcC-CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhc--
Q 037504           98 ALFYAAASG-SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIET--  173 (396)
Q Consensus        98 pLh~A~~~g-~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~--  173 (396)
                      |+|+|+..| ..+++..+++.|.+++   .....|.||||+|+..|+.++++.|++.++ .+.....+.+++|.+...  
T Consensus       443 ~lhvaa~~g~~~~~~~~l~~~g~~~n---~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~  519 (1143)
T KOG4177|consen  443 PLHVAAKKGRYLQIARLLLQYGADPN---AVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDT  519 (1143)
T ss_pred             hhhhhhhcccHhhhhhhHhhcCCCcc---hhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhh
Confidence            999999999 8899999999999854   334579999999999999999999998886 555666777777665433  


Q ss_pred             ------------------cchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 037504          174 ------------------DSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIW  235 (396)
Q Consensus       174 ------------------~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~  235 (396)
                                        +.+.||||.|+.+|                           .+.+|++|++     ++++++
T Consensus       520 v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g---------------------------~v~~VkfLLe-----~gAdv~  567 (1143)
T KOG4177|consen  520 VKVAKILLEHGANVDLRTGRGYTPLHVAVHYG---------------------------NVDLVKFLLE-----HGADVN  567 (1143)
T ss_pred             HHHHHHHhhcCCceehhcccccchHHHHHhcC---------------------------CchHHHHhhh-----CCcccc
Confidence                              23489999999998                           4788888775     689999


Q ss_pred             cccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHh
Q 037504          236 KFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVK  315 (396)
Q Consensus       236 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~  315 (396)
                      .+++.|+||||.||..|+.+++.+|+++|++    +|..|.+|.||||+|+..|+.++++.+                  
T Consensus       568 ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~----vna~d~~g~TpL~iA~~lg~~~~~k~l------------------  625 (1143)
T KOG4177|consen  568 AKDKLGYTPLHQAAQQGHNDIAELLLKHGAS----VNAADLDGFTPLHIAVRLGYLSVVKLL------------------  625 (1143)
T ss_pred             ccCCCCCChhhHHHHcChHHHHHHHHHcCCC----CCcccccCcchhHHHHHhcccchhhHH------------------
Confidence            9999999999999999999999999999999    899999999999999999999999887                  


Q ss_pred             hhcchhh-----hhhhcCCCCCchhhHHHH
Q 037504          316 KVVPRKF-----AEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       316 ~l~~~~~-----~~~~~~~g~tpl~~a~~~  340 (396)
                       +..++.     ....+.+|.+|.++..+.
T Consensus       626 -~~~~~~~~~~~~~~e~~~g~~p~~v~e~~  654 (1143)
T KOG4177|consen  626 -KVVTATPAATDPVKENRKGAVPEDVAEEL  654 (1143)
T ss_pred             -HhccCccccccchhhhhcccChhhHHHHh
Confidence             455555     778899999999997653


No 35 
>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]
Probab=99.97  E-value=1.2e-31  Score=247.65  Aligned_cols=198  Identities=23%  Similarity=0.240  Sum_probs=171.3

Q ss_pred             CCCCcccccccc-CC-CcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 037504            2 AHSAPLELHVYS-NP-PVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVK   79 (396)
Q Consensus         2 ~h~~~~~~~~~~-~~-~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~   79 (396)
                      |+.+.++.++.+ +. ..+.|++|.|+||+||.+++++++++|+++ |+++|..-..-+.||||+|+++|+..+|.+|++
T Consensus        55 G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~-gadvn~~gG~l~stPLHWAar~G~~~vv~lLlq  133 (600)
T KOG0509|consen   55 GELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISH-GADVNAIGGVLGSTPLHWAARNGHISVVDLLLQ  133 (600)
T ss_pred             chHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHc-CCCccccCCCCCCCcchHHHHcCcHHHHHHHHH
Confidence            344455666665 32 344677999999999999999999999985 999999955889999999999999999999999


Q ss_pred             HhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCC
Q 037504           80 KMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLK  159 (396)
Q Consensus        80 ~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~  159 (396)
                      +|  +++  +.+|.+|.||||+|++.|+.-.|-+|+.+|++   ++.+|.+|+||||+|+..|....+..|+..++    
T Consensus       134 hG--Adp--t~~D~~G~~~lHla~~~~~~~~vayll~~~~d---~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a----  202 (600)
T KOG0509|consen  134 HG--ADP--TLKDKQGLTPLHLAAQFGHTALVAYLLSKGAD---IDLRDNNGRTPLMWAAYKGFALFVRRLLKFGA----  202 (600)
T ss_pred             cC--CCC--ceecCCCCcHHHHHHHhCchHHHHHHHHhccc---CCCcCCCCCCHHHHHHHhcccHHHHHHHHhcc----
Confidence            99  877  99999999999999999999999999999988   77789999999999999999887888887665    


Q ss_pred             CcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccccccc-
Q 037504          160 DDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFD-  238 (396)
Q Consensus       160 ~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d-  238 (396)
                                                                                               .++..| 
T Consensus       203 -------------------------------------------------------------------------~~~~~d~  209 (600)
T KOG0509|consen  203 -------------------------------------------------------------------------SLLLTDD  209 (600)
T ss_pred             -------------------------------------------------------------------------ccccccc
Confidence                                                                                     233344 


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504          239 ENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL  288 (396)
Q Consensus       239 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~  288 (396)
                      ..|+||||+|+..|+.+++.+|++.|++    .+.+|.+|.||+.+|..+
T Consensus       210 ~~g~TpLHwa~~~gN~~~v~Ll~~g~~~----~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  210 NHGNTPLHWAVVGGNLTAVKLLLEGGAD----LDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccCCchHHHHHhcCCcceEehhhhcCCc----ccccccCCCCHHHHHHHh
Confidence            8899999999999999999977777787    778899999999999776


No 36 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.97  E-value=6.9e-31  Score=249.71  Aligned_cols=281  Identities=14%  Similarity=0.098  Sum_probs=203.1

Q ss_pred             ccccccchHHHH-HHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHH-cCCHHHHHHHHHHhhhccc---------
Q 037504           18 EEIRTRRLKLYR-VALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAA-ANRIDFVKKLVKKMKAENL---------   86 (396)
Q Consensus        18 ~~~~~g~t~Lh~-A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~-~g~~~~v~~Ll~~~~~~~~---------   86 (396)
                      ..+.+|.+++|+ |...|++|+|+.|++. |+++|.+ +..|.||||+|+. .++.|++++|++.|...+.         
T Consensus        66 ~~n~~~~~~~~~~~s~n~~lElvk~LI~~-GAdvN~~-~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~  143 (631)
T PHA02792         66 YKNINDFDIFEYLCSDNIDIELLKLLISK-GLEINSI-KNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKII  143 (631)
T ss_pred             cCccCCccHHHHHHHhcccHHHHHHHHHc-CCCcccc-cCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchh
Confidence            456667778874 5667899999999985 9999988 7779999999965 6999999999999932111         


Q ss_pred             -----------------------chhcccCCCCcHHHHHHHcC-------CHHHHHHHHhcCCCCccccCCCCCCCcHHH
Q 037504           87 -----------------------DLAKRNRIGCTALFYAAASG-------SVELVKATMEGNEDITMVPQDDKDRMLPIV  136 (396)
Q Consensus        87 -----------------------d~~~~d~~g~tpLh~A~~~g-------~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh  136 (396)
                                             -+|..|..|.||||+|+..+       +.+++++|+++|++   ++..|..|.||||
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~---~~~~d~~g~t~l~  220 (631)
T PHA02792        144 IEQITRAEYYNWDDELDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKE---MRYYTYREHTTLY  220 (631)
T ss_pred             hhhcccccccchhhhccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCC---cCccCCCCChHHH
Confidence                                   13466778999999999999       89999999999999   6667778999999


Q ss_pred             HHHhcC--CHHHHHHHHhhcccCCCCcchhHHHHH--------------------Hhhccch------------------
Q 037504          137 GAASLG--HTEVVEFLYRETKNSLKDDDCIELLVK--------------------LIETDSY------------------  176 (396)
Q Consensus       137 ~A~~~~--~~~~v~~Ll~~~~~~~~~~~g~~~l~~--------------------~~~~~~~------------------  176 (396)
                      +|+.+.  +.|++++|++..- ...+.  ...|.-                    .+..+..                  
T Consensus       221 ~~~~~~~i~~ei~~~L~~~~~-~~~~~--~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~  297 (631)
T PHA02792        221 YYVDKCDIKREIFDALFDSNY-SGNEL--MNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISS  297 (631)
T ss_pred             HHHHcccchHHHHHHHHhccc-cccch--HhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHH
Confidence            999999  8899999987432 11111  111111                    1111100                  


Q ss_pred             ---------hhHHHHHHhcCCCCCCCCCcchhhhhhhccchhh-----------hhHHHHHHHHHHHHHHHHhCCccccc
Q 037504          177 ---------ETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAV-----------ENERALELVELLWENFLFKYPDLIWK  236 (396)
Q Consensus       177 ---------~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~ll~~ll~~~~~~i~~  236 (396)
                               +-.||.-.+.+     ....+.++.+.+.|....           ......++++.|+     ..|++++.
T Consensus       298 ~~~~~~~~~q~~l~~Yl~~~-----~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLI-----s~GADIN~  367 (631)
T PHA02792        298 ILKRYTDSIQDLLSEYVSYH-----TVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYIL-----KNGNVVVE  367 (631)
T ss_pred             HHHHHhHHHHHHHHHHHhcC-----CccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHH-----HcCCchhh
Confidence                     11222222222     123344444444444311           1112344554443     56888999


Q ss_pred             ccCCC--CcHHHHHHHcCcH---HHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHH
Q 037504          237 FDENG--HTIFHIAVSNRMR---EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWF  311 (396)
Q Consensus       237 ~d~~g--~t~Lh~A~~~~~~---~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~  311 (396)
                      +|.+|  .||||+|+.....   +++++|+++|++    +|.+|..|+||||+|+..++.+++++|              
T Consensus       368 kD~~g~~~TpLh~A~~n~~~~v~~IlklLIs~GAD----IN~kD~~G~TPLh~Aa~~~n~eivelL--------------  429 (631)
T PHA02792        368 DDDNIINIMPLFPTLSIHESDVLSILKLCKPYIDD----INKIDKHGRSILYYCIESHSVSLVEWL--------------  429 (631)
T ss_pred             hcCCCCChhHHHHHHHhccHhHHHHHHHHHhcCCc----cccccccCcchHHHHHHcCCHHHHHHH--------------
Confidence            98775  6999998876654   468899999999    899999999999999999998888887              


Q ss_pred             HHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504          312 QEVKKVVPRKFAEEKNNDGLTPGDLFIK  339 (396)
Q Consensus       312 ~~v~~l~~~~~~~~~~~~g~tpl~~a~~  339 (396)
                           +.+|++++.+|..|+||+++|..
T Consensus       430 -----Ls~GADIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        430 -----IDNGADINITTKYGSTCIGICVI  452 (631)
T ss_pred             -----HHCCCCCCCcCCCCCCHHHHHHH
Confidence                 77899999999999999999864


No 37 
>PHA02859 ankyrin repeat protein; Provisional
Probab=99.97  E-value=1.8e-30  Score=222.21  Aligned_cols=177  Identities=21%  Similarity=0.211  Sum_probs=149.5

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCccccCCC-CCC
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASG--SVELVKATMEGNEDITMVPQDD-KDR  131 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g~~~~~~~~~d-~~g  131 (396)
                      ...+.||||+|+..|+.++|+.|++..       +..|..|.||||+|+..+  +.+++++|+++|++++   .++ ..|
T Consensus        18 ~~~~~~pL~~A~~~~~~~~vk~Li~~~-------n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn---~~~~~~g   87 (209)
T PHA02859         18 FYRYCNPLFYYVEKDDIEGVKKWIKFV-------NDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVN---FKTRDNN   87 (209)
T ss_pred             hhccCcHHHHHHHhCcHHHHHHHHHhh-------hccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCC---ccCCCCC
Confidence            466899999999999999999999753       667889999999999854  8999999999999954   444 379


Q ss_pred             CcHHHHHHhc---CCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccch
Q 037504          132 MLPIVGAASL---GHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK  208 (396)
Q Consensus       132 ~tpLh~A~~~---~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~  208 (396)
                      .||||+|+..   ++.+++++|+++|+                                                     
T Consensus        88 ~TpLh~a~~~~~~~~~eiv~~Ll~~ga-----------------------------------------------------  114 (209)
T PHA02859         88 LSALHHYLSFNKNVEPEILKILIDSGS-----------------------------------------------------  114 (209)
T ss_pred             CCHHHHHHHhCccccHHHHHHHHHCCC-----------------------------------------------------
Confidence            9999998754   36777777776554                                                     


Q ss_pred             hhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHH--cCcHHHHHHHHhhccccccccccccCCCCchhhh-h
Q 037504          209 AVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVS--NRMREIFKFIFEISSVADLLFDSKDKDGNNILHL-A  285 (396)
Q Consensus       209 ~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~--~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~-A  285 (396)
                                              +++.+|..|.||||+|+.  .++.+++++|+++|++    ++.+|..|+||||. |
T Consensus       115 ------------------------din~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gad----in~~d~~g~t~Lh~~a  166 (209)
T PHA02859        115 ------------------------SITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVS----FLNKDFDNNNILYSYI  166 (209)
T ss_pred             ------------------------CCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCC----cccccCCCCcHHHHHH
Confidence                                    467788999999999986  4689999999999999    88999999999996 5


Q ss_pred             hcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          286 GKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       286 ~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      +..++.+++++|                   +..|++++.+|..|+||+++|..+.
T Consensus       167 ~~~~~~~iv~~L-------------------l~~Gadi~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        167 LFHSDKKIFDFL-------------------TSLGIDINETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HhcCCHHHHHHH-------------------HHcCCCCCCCCCCCCCHHHHHhhhh
Confidence            667787887776                   6689999999999999999997543


No 38 
>PHA02917 ankyrin-like protein; Provisional
Probab=99.97  E-value=2.8e-29  Score=247.27  Aligned_cols=223  Identities=17%  Similarity=0.131  Sum_probs=178.1

Q ss_pred             HHHHHHHHHhCccccccccCCCCchHHHHHHHc---CCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCH----
Q 037504           36 WARAKVIYDEHKDEIGDVITRLGDTALHVAAAA---NRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSV----  108 (396)
Q Consensus        36 ~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~----  108 (396)
                      ++.|++|+. ++..++.. |.+|+||||+|+..   |+.++|++||+.|  +++  +.+|..|.||||+|+..|+.    
T Consensus        12 ~~~~~~l~~-~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~g--a~v--~~~~~~g~TpL~~Aa~~g~~~v~~   85 (661)
T PHA02917         12 LDELKQMLR-DRDPNDTR-NQFKNNALHAYLFNEHCNNVEVVKLLLDSG--TNP--LHKNWRQLTPLEEYTNSRHVKVNK   85 (661)
T ss_pred             HHHHHHHHh-ccCccccc-CCCCCcHHHHHHHhhhcCcHHHHHHHHHCC--CCc--cccCCCCCCHHHHHHHcCChhHHH
Confidence            467888997 47777776 99999999998665   8899999999998  777  89999999999999999985    


Q ss_pred             HHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHH--h
Q 037504          109 ELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLA--R  185 (396)
Q Consensus       109 ~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~--~  185 (396)
                      ++++.|++.+...+ +  .  ...+++|+|+..++.+++++|++.|+ .+.++.+|             .||||.++  .
T Consensus        86 ~~~~~Ll~~~~~~n-~--~--~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g-------------~T~L~~~~a~~  147 (661)
T PHA02917         86 DIAMALLEATGYSN-I--N--DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENH-------------RSVIENYVMTD  147 (661)
T ss_pred             HHHHHHHhccCCCC-C--C--CcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCC-------------ccHHHHHHHcc
Confidence            45678887654321 2  2  23477888999999999999999999 66777778             89998654  3


Q ss_pred             cCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC---CC-----------CcHHHHHHH-
Q 037504          186 KNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE---NG-----------HTIFHIAVS-  250 (396)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~---~g-----------~t~Lh~A~~-  250 (396)
                      .+                           ..++++.|++     .|++++..|.   .|           .||||+|+. 
T Consensus       148 ~~---------------------------~~eivklLi~-----~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~  195 (661)
T PHA02917        148 DP---------------------------VPEIIDLFIE-----NGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIIS  195 (661)
T ss_pred             CC---------------------------CHHHHHHHHH-----cCCCccccccccccccccccccccccccHHHHHHhh
Confidence            44                           4678877764     5777876553   34           599999986 


Q ss_pred             ----------cCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCC--CccccccchhHhHHHHHHHHHHHhhhc
Q 037504          251 ----------NRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPL--NRLNIVSVAALQLQRELLWFQEVKKVV  318 (396)
Q Consensus       251 ----------~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~--~~~~~l~~~~~~~~~~l~~~~~v~~l~  318 (396)
                                +++.+++++|+++|++    +|.+|.+|+||||+|++.|+.  +++++                    |.
T Consensus       196 ~~~~~~~~~~~~~~eiv~~Li~~Gad----vn~~d~~G~TpLh~A~~~g~~~~eivk~--------------------Li  251 (661)
T PHA02917        196 HLYSESDTRAYVRPEVVKCLINHGIK----PSSIDKNYCTALQYYIKSSHIDIDIVKL--------------------LM  251 (661)
T ss_pred             cccccccccccCcHHHHHHHHHCCCC----cccCCCCCCcHHHHHHHcCCCcHHHHHH--------------------HH
Confidence                      4688999999999999    899999999999999999986  45555                    44


Q ss_pred             chhhhh----hhcCCCCCchhhHH
Q 037504          319 PRKFAE----EKNNDGLTPGDLFI  338 (396)
Q Consensus       319 ~~~~~~----~~~~~g~tpl~~a~  338 (396)
                      .|++++    ..|..|.||++++.
T Consensus       252 ~g~d~~~~~~~~~~~~~~~~~~a~  275 (661)
T PHA02917        252 KGIDNTAYSYIDDLTCCTRGIMAD  275 (661)
T ss_pred             hCCcccccccccCcccccchHHHH
Confidence            576654    46667888888776


No 39 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.96  E-value=4.7e-29  Score=229.14  Aligned_cols=210  Identities=18%  Similarity=0.150  Sum_probs=173.4

Q ss_pred             HHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchh------cccCCCCcHHHHHHH
Q 037504           31 ALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLA------KRNRIGCTALFYAAA  104 (396)
Q Consensus        31 ~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~------~~d~~g~tpLh~A~~  104 (396)
                      ..+.-.+++..++-.+|.+++.. +.+|     +|+..+..|++++|+++|  +++  +      .++..++|+||+++.
T Consensus        56 ~~~~~~~~~~~~~~~~~~~i~~~-~~~~-----~~~~~~~k~~~~~l~s~~--~~~--~~~~~~~~~~~~~~~~L~~~~~  125 (437)
T PHA02795         56 PICDPVDVLYDYFRIHRDNIDQY-IVDR-----LFAYITYKDIISALVSKN--YME--DIFSIIIKNCNSVQDLLLYYLS  125 (437)
T ss_pred             ccCCHHHHHHHHHHHcCcchhhh-hhhh-----HHhhcchHHHHHHHHhcc--ccc--chhhhhhhccccccHHHHHHHH
Confidence            33455666655555679999887 6666     999999999999999999  776  5      688889999999999


Q ss_pred             --cCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHH
Q 037504          105 --SGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHV  182 (396)
Q Consensus       105 --~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~  182 (396)
                        .|+.++|++|+++|++++   ..  ++.||||.|+..++.+++++|+++|+....  .+.++++..    .+.+++|.
T Consensus       126 n~~n~~eiV~~LI~~GADIn---~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n--~~~~~l~~~----~~~t~l~~  194 (437)
T PHA02795        126 NAYVEIDIVDFMVDHGAVIY---KI--ECLNAYFRGICKKESSVVEFILNCGIPDEN--DVKLDLYKI----IQYTRGFL  194 (437)
T ss_pred             hcCCCHHHHHHHHHCCCCCC---CC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccc--cccchhhhh----hccchhHH
Confidence              899999999999999954   44  668999999999999999999999972221  122222211    12688999


Q ss_pred             HHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 037504          183 LARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE  262 (396)
Q Consensus       183 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~  262 (396)
                      |+..+                           ..++++.++     .+++++|.+|..|+||||+|+..|+.+++++|++
T Consensus       195 a~~~~---------------------------~~eIve~LI-----s~GADIN~kD~~G~TpLh~Aa~~g~~eiVelLL~  242 (437)
T PHA02795        195 VDEPT---------------------------VLEIYKLCI-----PYIEDINQLDAGGRTLLYRAIYAGYIDLVSWLLE  242 (437)
T ss_pred             HHhcC---------------------------HHHHHHHHH-----hCcCCcCcCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            98877                           467777665     4688999999999999999999999999999999


Q ss_pred             hccccccccccccCCCCchhhhhhcCCC--------CCccccc
Q 037504          263 ISSVADLLFDSKDKDGNNILHLAGKLPP--------LNRLNIV  297 (396)
Q Consensus       263 ~g~~~~~~~n~~d~~g~TpLh~A~~~~~--------~~~~~~l  297 (396)
                      +|++    +|.+|..|+||||+|+..|+        .+++++|
T Consensus       243 ~GAd----IN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelL  281 (437)
T PHA02795        243 NGAN----VNAVMSNGYTCLDVAVDRGSVIARRETHLKILEIL  281 (437)
T ss_pred             CCCC----CCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHH
Confidence            9999    89999999999999999985        3677766


No 40 
>KOG0508 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.96  E-value=1.3e-28  Score=218.72  Aligned_cols=215  Identities=20%  Similarity=0.246  Sum_probs=177.8

Q ss_pred             HHHHcCCHHHHHHHHHhCc-ccc---ccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhccc------chhcccCCCCcH
Q 037504           29 RVALNGDWARAKVIYDEHK-DEI---GDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENL------DLAKRNRIGCTA   98 (396)
Q Consensus        29 ~A~~~g~~~~v~~ll~~~~-~~~---~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~------d~~~~d~~g~tp   98 (396)
                      .|++.|....+..|+.... .++   -.. ..+|.|||-+||++||.++|++|+++. .+++      ..+-....|-+|
T Consensus        10 naa~~g~l~~l~~ll~~~s~~ei~~l~~~-~~~g~tPL~iaaRnGH~~vVeyLle~~-~a~~e~~GsV~FDge~Iegapp   87 (615)
T KOG0508|consen   10 NAARDGKLQLLAKLLINSSNEEIISLIGE-VQNGGTPLLIAARNGHADVVEYLLEHC-RASPEQGGSVRFDGETIEGAPP   87 (615)
T ss_pred             HHhhhhhHHHHHHHHhCCchHHHHHHhcc-ccCCCCceeeehhcCcHHHHHHHHHHh-cCCccCCceEEeCCcccCCCch
Confidence            6788888877777765422 111   112 467889999999999999999999965 1222      123345678899


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchh
Q 037504           99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYE  177 (396)
Q Consensus        99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~  177 (396)
                      |..|+..||+++|+.|+++|++   ++.......|||-.||..|+.+++++|+++++ ..+.+..|             .
T Consensus        88 LWaAsaAGHl~vVk~L~~~ga~---VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhG-------------h  151 (615)
T KOG0508|consen   88 LWAASAAGHLEVVKLLLRRGAS---VNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHG-------------H  151 (615)
T ss_pred             hhHHhccCcHHHHHHHHHhcCc---cccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCC-------------C
Confidence            9999999999999999999988   55555578899999999999999999999999 67777777             8


Q ss_pred             hHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHH
Q 037504          178 TALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIF  257 (396)
Q Consensus       178 t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v  257 (396)
                      |.||+|+.+|                           ..++++++++     .++++|.++..|+|+||.++..|+.+++
T Consensus       152 TcLmIa~ykG---------------------------h~~I~qyLle-----~gADvn~ks~kGNTALH~caEsG~vdiv  199 (615)
T KOG0508|consen  152 TCLMIACYKG---------------------------HVDIAQYLLE-----QGADVNAKSYKGNTALHDCAESGSVDIV  199 (615)
T ss_pred             eeEEeeeccC---------------------------chHHHHHHHH-----hCCCcchhcccCchHHHhhhhcccHHHH
Confidence            9999999999                           3688888876     4889999999999999999999999999


Q ss_pred             HHHHhhccccccccccccCCCCchhhhhhcCCCCCcccccc
Q 037504          258 KFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVS  298 (396)
Q Consensus       258 ~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~  298 (396)
                      ++|+++|+..     .+|..|.|||..|+..|+.++|..|.
T Consensus       200 q~Ll~~ga~i-----~~d~~GmtPL~~Aa~tG~~~iVe~L~  235 (615)
T KOG0508|consen  200 QLLLKHGAKI-----DVDGHGMTPLLLAAVTGHTDIVERLL  235 (615)
T ss_pred             HHHHhCCcee-----eecCCCCchHHHHhhhcchHHHHHHh
Confidence            9999999983     35778999999999999999998874


No 41 
>PHA02792 ankyrin-like protein; Provisional
Probab=99.95  E-value=1.8e-27  Score=226.56  Aligned_cols=236  Identities=15%  Similarity=0.157  Sum_probs=171.7

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHH-cCCHHHHHHHHHhCccccc----------------------------
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVAL-NGDWARAKVIYDEHKDEIG----------------------------   51 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~-~g~~~~v~~ll~~~~~~~~----------------------------   51 (396)
                      ++.+++++|+..+++.. .+..|.+|||+|+. .|+.|++++||+. |+++.                            
T Consensus        83 ~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~-Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  161 (631)
T PHA02792         83 IDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDK-GIPTCSNIQYGYKIIIEQITRAEYYNWDDELDD  161 (631)
T ss_pred             ccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHC-CCCcccccccCcchhhhhcccccccchhhhccc
Confidence            56788999999988775 45557899999966 6999999999986 65421                            


Q ss_pred             --------cccCCCCchHHHHHHHcC-------CHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcC--CHHHHHHH
Q 037504           52 --------DVITRLGDTALHVAAAAN-------RIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASG--SVELVKAT  114 (396)
Q Consensus        52 --------~~~~~~g~t~Lh~A~~~g-------~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g--~~~~v~~L  114 (396)
                              .. |..|.||||+|+..+       +.++++.|+++|  +++  +.+|..|.||||+|+...  ..|++++|
T Consensus       162 ~~~~~~i~~~-~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g--~~~--~~~d~~g~t~l~~~~~~~~i~~ei~~~L  236 (631)
T PHA02792        162 YDYDYTTDYD-DRMGKTVLYYYIITRSQDGYATSLDVINYLISHE--KEM--RYYTYREHTTLYYYVDKCDIKREIFDAL  236 (631)
T ss_pred             cccccccccC-CCCCCchHHHHHhhCCcccccCCHHHHHHHHhCC--CCc--CccCCCCChHHHHHHHcccchHHHHHHH
Confidence                    22 566999999999999       899999999998  777  889999999999999988  77888888


Q ss_pred             HhcCCCCc-------------------ccc---------------------CC---------------------------
Q 037504          115 MEGNEDIT-------------------MVP---------------------QD---------------------------  127 (396)
Q Consensus       115 l~~g~~~~-------------------~~~---------------------~~---------------------------  127 (396)
                      ++..-...                   .++                     ..                           
T Consensus       237 ~~~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~  316 (631)
T PHA02792        237 FDSNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSY  316 (631)
T ss_pred             HhccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhc
Confidence            76422000                   000                     00                           


Q ss_pred             ----------------C---CCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcC
Q 037504          128 ----------------D---KDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKN  187 (396)
Q Consensus       128 ----------------d---~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~  187 (396)
                                      +   .....+++.|+..|+.+++++|+++|+ .+.++.+|.           +.||||+|+...
T Consensus       317 ~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~-----------~~TpLh~A~~n~  385 (631)
T PHA02792        317 HTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNII-----------NIMPLFPTLSIH  385 (631)
T ss_pred             CCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCC-----------ChhHHHHHHHhc
Confidence                            0   012334555555666666666666665 222333221           157777765543


Q ss_pred             CCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcccc
Q 037504          188 LTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVA  267 (396)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~  267 (396)
                                              .....++++.+     ..+++++|.+|..|+||||+|+..++.+++++|+++|++ 
T Consensus       386 ------------------------~~~v~~IlklL-----Is~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GAD-  435 (631)
T PHA02792        386 ------------------------ESDVLSILKLC-----KPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGAD-  435 (631)
T ss_pred             ------------------------cHhHHHHHHHH-----HhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCC-
Confidence                                    11122333333     457889999999999999999999999999999999999 


Q ss_pred             ccccccccCCCCchhhhhhc
Q 037504          268 DLLFDSKDKDGNNILHLAGK  287 (396)
Q Consensus       268 ~~~~n~~d~~g~TpLh~A~~  287 (396)
                         +|.+|..|+||||+|+.
T Consensus       436 ---IN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        436 ---INITTKYGSTCIGICVI  452 (631)
T ss_pred             ---CCCcCCCCCCHHHHHHH
Confidence               89999999999999975


No 42 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94  E-value=2.7e-26  Score=234.34  Aligned_cols=178  Identities=17%  Similarity=0.172  Sum_probs=151.9

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP  134 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp  134 (396)
                      +..+.++||.||..|+.++++.|++.|  .++  |.+|..|+||||+|+..|+.+++++|+++|++   ++.+|.+|.||
T Consensus       522 ~~~~~~~L~~Aa~~g~~~~l~~Ll~~G--~d~--n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gad---in~~d~~G~Tp  594 (823)
T PLN03192        522 DPNMASNLLTVASTGNAALLEELLKAK--LDP--DIGDSKGRTPLHIAASKGYEDCVLVLLKHACN---VHIRDANGNTA  594 (823)
T ss_pred             CccchhHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHHHHHcChHHHHHHHHhcCCC---CCCcCCCCCCH
Confidence            556789999999999999999999988  666  88999999999999999999999999999998   55667789999


Q ss_pred             HHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHH
Q 037504          135 IVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENER  214 (396)
Q Consensus       135 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (396)
                      ||+|+..|+.+++++|++.++. .....+             .++||.|+..|                           
T Consensus       595 L~~A~~~g~~~iv~~L~~~~~~-~~~~~~-------------~~~L~~Aa~~g---------------------------  633 (823)
T PLN03192        595 LWNAISAKHHKIFRILYHFASI-SDPHAA-------------GDLLCTAAKRN---------------------------  633 (823)
T ss_pred             HHHHHHhCCHHHHHHHHhcCcc-cCcccC-------------chHHHHHHHhC---------------------------
Confidence            9999999999999999977652 222233             68899999988                           


Q ss_pred             HHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCC-CchhhhhhcCC
Q 037504          215 ALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDG-NNILHLAGKLP  289 (396)
Q Consensus       215 ~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g-~TpLh~A~~~~  289 (396)
                      ..++++.+++     .+.++|.+|.+|+||||+|+..|+.+++++|+++|++    ++..|..| .||++++....
T Consensus       634 ~~~~v~~Ll~-----~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAd----v~~~~~~g~~t~~~l~~~~~  700 (823)
T PLN03192        634 DLTAMKELLK-----QGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGAD----VDKANTDDDFSPTELRELLQ  700 (823)
T ss_pred             CHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHHH
Confidence            3566666653     5788999999999999999999999999999999999    88899988 99999886543


No 43 
>PHA02795 ankyrin-like protein; Provisional
Probab=99.94  E-value=3.6e-26  Score=210.21  Aligned_cols=185  Identities=12%  Similarity=-0.029  Sum_probs=159.0

Q ss_pred             HHHHcCCHHHHHHHHHhCccccc------cccCCCCchHHHHHHH--cCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504           29 RVALNGDWARAKVIYDEHKDEIG------DVITRLGDTALHVAAA--ANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF  100 (396)
Q Consensus        29 ~A~~~g~~~~v~~ll~~~~~~~~------~~~~~~g~t~Lh~A~~--~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh  100 (396)
                      +|+..+..++++.|+.. +++++      .+ +..++|+||+|+.  .|+.++|++|+++|  +++  +.+  ++.||||
T Consensus        83 ~~~~~~~k~~~~~l~s~-~~~~~~~~~~~~~-~~~~~~~L~~~~~n~~n~~eiV~~LI~~G--ADI--n~~--~~~t~lh  154 (437)
T PHA02795         83 LFAYITYKDIISALVSK-NYMEDIFSIIIKN-CNSVQDLLLYYLSNAYVEIDIVDFMVDHG--AVI--YKI--ECLNAYF  154 (437)
T ss_pred             HHhhcchHHHHHHHHhc-ccccchhhhhhhc-cccccHHHHHHHHhcCCCHHHHHHHHHCC--CCC--CCC--CCCCHHH
Confidence            99999999999988875 88877      55 7889999999999  89999999999999  887  664  4589999


Q ss_pred             HHHHcCCHHHHHHHHhcCCCCccccC---CCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccch
Q 037504          101 YAAASGSVELVKATMEGNEDITMVPQ---DDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSY  176 (396)
Q Consensus       101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~---~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~  176 (396)
                      +|+..++.+++++|+++|++......   .+..+.|++|.|+..++.+++++|+++|+ .+..+..|             
T Consensus       155 ~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G-------------  221 (437)
T PHA02795        155 RGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGG-------------  221 (437)
T ss_pred             HHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCC-------------
Confidence            99999999999999999985321111   11347899999999999999999999998 66677777             


Q ss_pred             hhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcC----
Q 037504          177 ETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNR----  252 (396)
Q Consensus       177 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~----  252 (396)
                      .||||+|+..|                           ..++++.|+     ..|++++.+|..|+||||+|+..|    
T Consensus       222 ~TpLh~Aa~~g---------------------------~~eiVelLL-----~~GAdIN~~d~~G~TpLh~Aa~~g~~~~  269 (437)
T PHA02795        222 RTLLYRAIYAG---------------------------YIDLVSWLL-----ENGANVNAVMSNGYTCLDVAVDRGSVIA  269 (437)
T ss_pred             CCHHHHHHHcC---------------------------CHHHHHHHH-----HCCCCCCCcCCCCCCHHHHHHHcCCccc
Confidence            89999999998                           356776665     468999999999999999999998    


Q ss_pred             ----cHHHHHHHHhhccc
Q 037504          253 ----MREIFKFIFEISSV  266 (396)
Q Consensus       253 ----~~~~v~~Ll~~g~~  266 (396)
                          +.+++++|+++|++
T Consensus       270 ~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        270 RRETHLKILEILLREPLS  287 (437)
T ss_pred             ccccHHHHHHHHHhCCCC
Confidence                46999999999998


No 44 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.94  E-value=1.6e-26  Score=216.48  Aligned_cols=245  Identities=22%  Similarity=0.218  Sum_probs=190.6

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCc------------cccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc
Q 037504           25 LKLYRVALNGDWARAKVIYDEHK------------DEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN   92 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~------------~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d   92 (396)
                      +-|..|+..|+.+.+..+|+..+            ..++.. |.+|.|+||.|+.+|+.+++++|++.-  +-+  +..|
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~q-d~~gfTalhha~Lng~~~is~llle~e--a~l--dl~d   79 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQ-DYSGFTLLHHAVLNGQNQISKLLLDYE--ALL--DLCD   79 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCcccccc-CccchhHHHHHHhcCchHHHHHHhcch--hhh--hhhh
Confidence            45677888888888888887421            234455 788888899998888888888888875  544  7777


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHh
Q 037504           93 RIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLI  171 (396)
Q Consensus        93 ~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~  171 (396)
                      ..|.+|||+|+..|+.+++++|+.++..   .+.....|.||||.|+++|+.+++.+|+.+++ ..+.+..+        
T Consensus        80 ~kg~~plhlaaw~g~~e~vkmll~q~d~---~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~--------  148 (854)
T KOG0507|consen   80 TKGILPLHLAAWNGNLEIVKMLLLQTDI---LNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSK--------  148 (854)
T ss_pred             ccCcceEEehhhcCcchHHHHHHhcccC---CCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCccc--------
Confidence            8888889998888888888888888854   44555678888999888888888888888888 44455555        


Q ss_pred             hccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHH-----HHhCCcccccccCCCCcHHH
Q 037504          172 ETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENF-----LFKYPDLIWKFDENGHTIFH  246 (396)
Q Consensus       172 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l-----l~~~~~~i~~~d~~g~t~Lh  246 (396)
                           .|+|.+|++.|                           ..++++.++..-     +..-+  -..++-.+-+|||
T Consensus       149 -----~t~ldlA~qfg---------------------------r~~Vvq~ll~~~~~~~~~~~~~--~~~~~~~~~~plH  194 (854)
T KOG0507|consen  149 -----ETVLDLASRFG---------------------------RAEVVQMLLQKKFPVQSSLRVG--DIKRPFPAIYPLH  194 (854)
T ss_pred             -----ccHHHHHHHhh---------------------------hhHHHHHHhhhccchhhcccCC--CCCCCCCCcCCcc
Confidence                 78888888888                           344444444321     11112  2345677899999


Q ss_pred             HHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhh
Q 037504          247 IAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEK  326 (396)
Q Consensus       247 ~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~  326 (396)
                      .|+++|+.++++.|+..|.+    +|...+. -|+||-|+..|..+++.+|                   +..|.+.+++
T Consensus       195 laakngh~~~~~~ll~ag~d----in~~t~~-gtalheaalcgk~evvr~l-------------------l~~gin~h~~  250 (854)
T KOG0507|consen  195 LAAKNGHVECMQALLEAGFD----INYTTED-GTALHEAALCGKAEVVRFL-------------------LEIGINTHIK  250 (854)
T ss_pred             hhhhcchHHHHHHHHhcCCC----ccccccc-chhhhhHhhcCcchhhhHH-------------------Hhhccccccc
Confidence            99999999999999999999    7766655 4999999999999999888                   7788889999


Q ss_pred             cCCCCCchhhHHHHhHH
Q 037504          327 NNDGLTPGDLFIKEHEE  343 (396)
Q Consensus       327 ~~~g~tpl~~a~~~~~~  343 (396)
                      |.+|+|.|++..+....
T Consensus       251 n~~~qtaldil~d~~~~  267 (854)
T KOG0507|consen  251 NQHGQTALDIIIDLQEN  267 (854)
T ss_pred             cccchHHHHHHHhcchh
Confidence            99999999998765443


No 45 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.94  E-value=3.9e-27  Score=189.53  Aligned_cols=237  Identities=21%  Similarity=0.168  Sum_probs=195.1

Q ss_pred             ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHH
Q 037504           20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTAL   99 (396)
Q Consensus        20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpL   99 (396)
                      +..|...+-.+.+.|+.+.++..+.-.+..+... +.+|+.++|.|+-.|+...++.+|..+  +..  |..+-.+.+|+
T Consensus        59 ~~lge~~~~~~~~s~nsd~~v~s~~~~~~~~~~t-~p~g~~~~~v~ap~~s~~k~sttltN~--~rg--nevs~~p~s~~  133 (296)
T KOG0502|consen   59 NALGESLLTVAVRSGNSDVAVQSAQLDPDAIDET-DPEGWSALLVAAPCGSVDKVSTTLTNG--ARG--NEVSLMPWSPL  133 (296)
T ss_pred             HhcCCcccchhhhcCCcHHHHHhhccCCCCCCCC-CchhhhhhhhcCCCCCcceeeeeeccc--ccC--CccccccCChh
Confidence            4456666777888888888777665434334444 788999999999999999999999988  666  88899999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhh
Q 037504          100 FYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYET  178 (396)
Q Consensus       100 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t  178 (396)
                      .+++...+++.+..|.+.-     ++..|+.|+|||.||+..|++++|+||++.|+ +..-.+..             .+
T Consensus       134 slsVhql~L~~~~~~~~n~-----VN~~De~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~lgk~r-------------es  195 (296)
T KOG0502|consen  134 SLSVHQLHLDVVDLLVNNK-----VNACDEFGFTPLIWAAAKGHIPVVQFLLNSGADPDALGKYR-------------ES  195 (296)
T ss_pred             hHHHHHHHHHHHHHHhhcc-----ccCccccCchHhHHHHhcCchHHHHHHHHcCCChhhhhhhh-------------hh
Confidence            9999999999888887654     55668899999999999999999999999999 44443333             79


Q ss_pred             HHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHH
Q 037504          179 ALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFK  258 (396)
Q Consensus       179 ~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~  258 (396)
                      +|.+|++.|                           ..++++.+++     +..++|..|-+|-|||-+|++.|+.++++
T Consensus       196 ALsLAt~gg---------------------------ytdiV~lLL~-----r~vdVNvyDwNGgTpLlyAvrgnhvkcve  243 (296)
T KOG0502|consen  196 ALSLATRGG---------------------------YTDIVELLLT-----REVDVNVYDWNGGTPLLYAVRGNHVKCVE  243 (296)
T ss_pred             hHhHHhcCC---------------------------hHHHHHHHHh-----cCCCcceeccCCCceeeeeecCChHHHHH
Confidence            999999998                           5788877664     56779999999999999999999999999


Q ss_pred             HHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchh
Q 037504          259 FIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGD  335 (396)
Q Consensus       259 ~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~  335 (396)
                      .|+..|++    ++..|..|++++.+|+..|+. +|+..                   +.+.++..-+|+.-+||+|
T Consensus       244 ~Ll~sGAd----~t~e~dsGy~~mdlAValGyr-~Vqqv-------------------ie~h~lkl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  244 SLLNSGAD----VTQEDDSGYWIMDLAVALGYR-IVQQV-------------------IEKHALKLCQDSEKRTPLH  296 (296)
T ss_pred             HHHhcCCC----cccccccCCcHHHHHHHhhhH-HHHHH-------------------HHHHHHHHhhcccCCCCCC
Confidence            99999999    889999999999999999985 44333                   3345667777888888875


No 46 
>PLN03192 Voltage-dependent potassium channel; Provisional
Probab=99.94  E-value=8.1e-26  Score=230.88  Aligned_cols=192  Identities=16%  Similarity=0.216  Sum_probs=160.5

Q ss_pred             CCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHH
Q 037504           69 NRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVE  148 (396)
Q Consensus        69 g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~  148 (396)
                      ...++-..+.+.+  .    ...+..+.++||.||..|+.++++.|++.|++   ++..|..|.||||+|+..|+.++++
T Consensus       505 ~~l~v~~ll~~~~--~----~~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d---~n~~d~~G~TpLh~Aa~~g~~~~v~  575 (823)
T PLN03192        505 HDLNVGDLLGDNG--G----EHDDPNMASNLLTVASTGNAALLEELLKAKLD---PDIGDSKGRTPLHIAASKGYEDCVL  575 (823)
T ss_pred             ccccHHHHHhhcc--c----ccCCccchhHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcChHHHHH
Confidence            3445555555543  1    23445678999999999999999999999999   5667889999999999999999999


Q ss_pred             HHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHH
Q 037504          149 FLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFL  227 (396)
Q Consensus       149 ~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll  227 (396)
                      +|+++|+ .+..+.+|             .||||+|+..|                        +   .++++.+++   
T Consensus       576 ~Ll~~gadin~~d~~G-------------~TpL~~A~~~g------------------------~---~~iv~~L~~---  612 (823)
T PLN03192        576 VLLKHACNVHIRDANG-------------NTALWNAISAK------------------------H---HKIFRILYH---  612 (823)
T ss_pred             HHHhcCCCCCCcCCCC-------------CCHHHHHHHhC------------------------C---HHHHHHHHh---
Confidence            9999998 56677777             89999999998                        3   455655543   


Q ss_pred             HhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHH
Q 037504          228 FKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRE  307 (396)
Q Consensus       228 ~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~  307 (396)
                        .+...  ....|.++||+|+.+|+.+++++|+++|++    +|.+|.+|+||||+|+..|+.+++++|          
T Consensus       613 --~~~~~--~~~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad----in~~d~~G~TpLh~A~~~g~~~iv~~L----------  674 (823)
T PLN03192        613 --FASIS--DPHAAGDLLCTAAKRNDLTAMKELLKQGLN----VDSEDHQGATALQVAMAEDHVDMVRLL----------  674 (823)
T ss_pred             --cCccc--CcccCchHHHHHHHhCCHHHHHHHHHCCCC----CCCCCCCCCCHHHHHHHCCcHHHHHHH----------
Confidence              23322  235678999999999999999999999999    899999999999999999999999888          


Q ss_pred             HHHHHHHhhhcchhhhhhhcCCC-CCchhhHHH
Q 037504          308 LLWFQEVKKVVPRKFAEEKNNDG-LTPGDLFIK  339 (396)
Q Consensus       308 l~~~~~v~~l~~~~~~~~~~~~g-~tpl~~a~~  339 (396)
                               +.+|++++.+|..| .||++++..
T Consensus       675 ---------l~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        675 ---------IMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             ---------HHcCCCCCCCCCCCCCCHHHHHHH
Confidence                     77999999999998 999998754


No 47 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.93  E-value=1.1e-25  Score=228.74  Aligned_cols=236  Identities=18%  Similarity=0.150  Sum_probs=173.9

Q ss_pred             ccccchHHHHHHHcCCHHHHHHHHHh-CccccccccCCCCchHHH-HHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504           20 IRTRRLKLYRVALNGDWARAKVIYDE-HKDEIGDVITRLGDTALH-VAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT   97 (396)
Q Consensus        20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~g~t~Lh-~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t   97 (396)
                      -..+..+++.|++.|+.+.++.+++. .+.++|.. |..|+|||| .|+..++.++++.|++.+  .      ++..|.|
T Consensus        14 ~~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~-d~~G~t~Lh~~A~~~~~~eiv~lLl~~g--~------~~~~G~T   84 (743)
T TIGR00870        14 LSDEEKAFLPAAERGDLASVYRDLEEPKKLNINCP-DRLGRSALFVAAIENENLELTELLLNLS--C------RGAVGDT   84 (743)
T ss_pred             CCHHHHHHHHHHHcCCHHHHHHHhccccccCCCCc-CccchhHHHHHHHhcChHHHHHHHHhCC--C------CCCcChH
Confidence            34568999999999999999999974 26778877 899999999 899999999999999987  2      5778999


Q ss_pred             HHHHHHHcC---CHHHHHHHHhcCCCC------c-cccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHH
Q 037504           98 ALFYAAASG---SVELVKATMEGNEDI------T-MVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIEL  166 (396)
Q Consensus        98 pLh~A~~~g---~~~~v~~Ll~~g~~~------~-~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~  166 (396)
                      |||.|+..+   ...+++.+...+.+.      + .....+..|.||||+|+..|+.+++++|+++|+ .+.... +...
T Consensus        85 ~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~-~~~~  163 (743)
T TIGR00870        85 LLHAISLEYVDAVEAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARAC-GDFF  163 (743)
T ss_pred             HHHHHHhccHHHHHHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcC-Cchh
Confidence            999998732   223445555444321      0 011223469999999999999999999999998 332211 1110


Q ss_pred             HHHH--hhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcH
Q 037504          167 LVKL--IETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTI  244 (396)
Q Consensus       167 l~~~--~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~  244 (396)
                      ....  -....+.+|||+|+..+                           ..++++.++     .+|++++.+|..|+||
T Consensus       164 ~~~~~~~~~~~g~tpL~~Aa~~~---------------------------~~~iv~lLl-----~~gadin~~d~~g~T~  211 (743)
T TIGR00870       164 VKSQGVDSFYHGESPLNAAACLG---------------------------SPSIVALLS-----EDPADILTADSLGNTL  211 (743)
T ss_pred             hcCCCCCcccccccHHHHHHHhC---------------------------CHHHHHHHh-----cCCcchhhHhhhhhHH
Confidence            0000  00123589999999888                           356666554     4788999999999999


Q ss_pred             HHHHHHcC---------cHHHHHHHHhhccccc---cccccccCCCCchhhhhhcCCCCCccccc
Q 037504          245 FHIAVSNR---------MREIFKFIFEISSVAD---LLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       245 Lh~A~~~~---------~~~~v~~Ll~~g~~~~---~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      ||+|+..+         ...+.+++++.++...   .+.+..|.+|.||||+|+..|+.++++++
T Consensus       212 Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lL  276 (743)
T TIGR00870       212 LHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLK  276 (743)
T ss_pred             HHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHH
Confidence            99999986         2346667776665521   11266899999999999999999998877


No 48 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.92  E-value=6e-25  Score=199.20  Aligned_cols=232  Identities=21%  Similarity=0.229  Sum_probs=184.2

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA  104 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~  104 (396)
                      -.+..|+..|+.+.|..||.. ++.++.. +.+|.|+||-+|...+.+||++|++.|  +++  |..|..|+||||.|+.
T Consensus        42 a~~l~A~~~~d~~ev~~ll~~-ga~~~~~-n~DglTalhq~~id~~~e~v~~l~e~g--a~V--n~~d~e~wtPlhaaas  115 (527)
T KOG0505|consen   42 AVFLEACSRGDLEEVRKLLNR-GASPNLC-NVDGLTALHQACIDDNLEMVKFLVENG--ANV--NAQDNEGWTPLHAAAS  115 (527)
T ss_pred             HHHHhccccccHHHHHHHhcc-CCCcccc-CCccchhHHHHHhcccHHHHHHHHHhc--CCc--cccccccCCcchhhcc
Confidence            456778999999999999975 7788888 999999999999999999999999999  888  9999999999999999


Q ss_pred             cCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHH
Q 037504          105 SGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLA  184 (396)
Q Consensus       105 ~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~  184 (396)
                      .|+..++++|+++|+++..+   +.+|..|+.++......+++..-......++                      . ++
T Consensus       116 cg~~~i~~~li~~gA~~~av---Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~i----------------------e-a~  169 (527)
T KOG0505|consen  116 CGYLNIVEYLIQHGANLLAV---NSDGNMPYDLAEDEATLDVLETEMARQGIDI----------------------E-AA  169 (527)
T ss_pred             cccHHHHHHHHHhhhhhhhc---cCCCCCccccccCcchhHHHHHHHHHhcccH----------------------H-HH
Confidence            99999999999999996544   4468888888776655555544433222111                      0 11


Q ss_pred             hcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhc
Q 037504          185 RKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEIS  264 (396)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g  264 (396)
                      +.-                          ....+++.+...  ...+...+..+..|.|.||+|+.+|..++.++|+.+|
T Consensus       170 R~~--------------------------~e~~ml~D~~q~--l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag  221 (527)
T KOG0505|consen  170 RKA--------------------------EEQTMLDDARQW--LNAGAELDARHARGATALHVAAANGYTEVAALLLQAG  221 (527)
T ss_pred             hhh--------------------------hHHHHHHHHHHH--HhccccccccccccchHHHHHHhhhHHHHHHHHHHhc
Confidence            100                          011111111111  1256666777777999999999999999999999999


Q ss_pred             cccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504          265 SVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK  339 (396)
Q Consensus       265 ~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~  339 (396)
                      .+    ++.+|.+|+||||.|+.-|..+.+.+|                   ..++++.+.+.+.|.||+++|.+
T Consensus       222 ~~----~~~~D~dgWtPlHAAA~Wg~~~~~elL-------------------~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  222 YS----VNIKDYDGWTPLHAAAHWGQEDACELL-------------------VEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             cC----cccccccCCCcccHHHHhhhHhHHHHH-------------------HHhhcccchhhhcCCCCccchhh
Confidence            99    899999999999999999998888766                   66899999999999999999876


No 49 
>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]
Probab=99.92  E-value=6.4e-25  Score=205.79  Aligned_cols=221  Identities=23%  Similarity=0.205  Sum_probs=183.4

Q ss_pred             ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504           18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT   97 (396)
Q Consensus        18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t   97 (396)
                      .+|.+|.|+||.|+.+|+.++++.|++. .+.++.. |..|.+|||+|+..|+.++|+.++.++  ..+  |..+..|.|
T Consensus        44 ~qd~~gfTalhha~Lng~~~is~llle~-ea~ldl~-d~kg~~plhlaaw~g~~e~vkmll~q~--d~~--na~~~e~~t  117 (854)
T KOG0507|consen   44 LQDYSGFTLLHHAVLNGQNQISKLLLDY-EALLDLC-DTKGILPLHLAAWNGNLEIVKMLLLQT--DIL--NAVNIENET  117 (854)
T ss_pred             ccCccchhHHHHHHhcCchHHHHHHhcc-hhhhhhh-hccCcceEEehhhcCcchHHHHHHhcc--cCC--CcccccCcC
Confidence            3677999999999999999999988875 6777777 799999999999999999999999997  555  999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccch
Q 037504           98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSY  176 (396)
Q Consensus        98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~  176 (396)
                      |||.|+..||.+++.+|+.+|++.   ...+..+.|+|-+|++.|..++++.|++..- .......|     .-...-..
T Consensus       118 plhlaaqhgh~dvv~~Ll~~~adp---~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~-----~~~~~~~~  189 (854)
T KOG0507|consen  118 PLHLAAQHGHLEVVFYLLKKNADP---FIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVG-----DIKRPFPA  189 (854)
T ss_pred             ccchhhhhcchHHHHHHHhcCCCc---cccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCC-----CCCCCCCC
Confidence            999999999999999999999994   4456689999999999999999999998732 11111111     01111223


Q ss_pred             hhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHH
Q 037504          177 ETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREI  256 (396)
Q Consensus       177 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~  256 (396)
                      -+|||+|+++|                        |   .++++.+     ...|.++|....+| |+||.|+.+|..++
T Consensus       190 ~~plHlaakng------------------------h---~~~~~~l-----l~ag~din~~t~~g-talheaalcgk~ev  236 (854)
T KOG0507|consen  190 IYPLHLAAKNG------------------------H---VECMQAL-----LEAGFDINYTTEDG-TALHEAALCGKAEV  236 (854)
T ss_pred             cCCcchhhhcc------------------------h---HHHHHHH-----HhcCCCcccccccc-hhhhhHhhcCcchh
Confidence            79999999999                        4   3444444     35788899888877 89999999999999


Q ss_pred             HHHHHhhccccccccccccCCCCchhhhhhcCC
Q 037504          257 FKFIFEISSVADLLFDSKDKDGNNILHLAGKLP  289 (396)
Q Consensus       257 v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~  289 (396)
                      |++|++.|..    ...+|.+|.|+|.+-....
T Consensus       237 vr~ll~~gin----~h~~n~~~qtaldil~d~~  265 (854)
T KOG0507|consen  237 VRFLLEIGIN----THIKNQHGQTALDIIIDLQ  265 (854)
T ss_pred             hhHHHhhccc----cccccccchHHHHHHHhcc
Confidence            9999999999    6789999999999876543


No 50 
>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]
Probab=99.91  E-value=5.9e-25  Score=177.02  Aligned_cols=210  Identities=22%  Similarity=0.228  Sum_probs=182.4

Q ss_pred             cCCCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc
Q 037504           13 SNPPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN   92 (396)
Q Consensus        13 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d   92 (396)
                      ...+.+.+..|.++++.|+-+|+.+.+...|.. ++..|.. +-.+++|+.+++...+++++..+.+.    .+  |..|
T Consensus        86 ~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN-~~rgnev-s~~p~s~~slsVhql~L~~~~~~~~n----~V--N~~D  157 (296)
T KOG0502|consen   86 PDAIDETDPEGWSALLVAAPCGSVDKVSTTLTN-GARGNEV-SLMPWSPLSLSVHQLHLDVVDLLVNN----KV--NACD  157 (296)
T ss_pred             CCCCCCCCchhhhhhhhcCCCCCcceeeeeecc-cccCCcc-ccccCChhhHHHHHHHHHHHHHHhhc----cc--cCcc
Confidence            345566788899999999999999999888864 8888888 88999999999999999888777764    35  9999


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHh
Q 037504           93 RIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLI  171 (396)
Q Consensus        93 ~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~  171 (396)
                      ..|.|||.||++.|++++|++|++.|+++..+   .+...|+|.+|+..|..++|++|+.++. .+.-+.+|        
T Consensus       158 e~GfTpLiWAaa~G~i~vV~fLL~~GAdp~~l---gk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNG--------  226 (296)
T KOG0502|consen  158 EFGFTPLIWAAAKGHIPVVQFLLNSGADPDAL---GKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNG--------  226 (296)
T ss_pred             ccCchHhHHHHhcCchHHHHHHHHcCCChhhh---hhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCC--------
Confidence            99999999999999999999999999996533   4478899999999999999999999998 67777777        


Q ss_pred             hccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHc
Q 037504          172 ETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSN  251 (396)
Q Consensus       172 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~  251 (396)
                           -|||-+|++.+                        |   .++++.++     ..+++++..+..|++++..|+..
T Consensus       227 -----gTpLlyAvrgn------------------------h---vkcve~Ll-----~sGAd~t~e~dsGy~~mdlAVal  269 (296)
T KOG0502|consen  227 -----GTPLLYAVRGN------------------------H---VKCVESLL-----NSGADVTQEDDSGYWIMDLAVAL  269 (296)
T ss_pred             -----CceeeeeecCC------------------------h---HHHHHHHH-----hcCCCcccccccCCcHHHHHHHh
Confidence                 89999999988                        3   55666555     46899999999999999999999


Q ss_pred             CcHHHHHHHHhhccccccccccccCCCCchhh
Q 037504          252 RMREIFKFIFEISSVADLLFDSKDKDGNNILH  283 (396)
Q Consensus       252 ~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh  283 (396)
                      |.. +|+..+++-++    .+.+|..-.||+|
T Consensus       270 Gyr-~Vqqvie~h~l----kl~Q~~~~~~~~~  296 (296)
T KOG0502|consen  270 GYR-IVQQVIEKHAL----KLCQDSEKRTPLH  296 (296)
T ss_pred             hhH-HHHHHHHHHHH----HHhhcccCCCCCC
Confidence            987 88888887777    6788999999987


No 51 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.91  E-value=1.1e-24  Score=210.24  Aligned_cols=284  Identities=18%  Similarity=0.170  Sum_probs=206.9

Q ss_pred             CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504            2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK   80 (396)
Q Consensus         2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~   80 (396)
                      ||-+.+++++.++++++ +|..|.+||.+|+..|+..+|..|++. .++++...|..++|+|-+||..|+.++|++||..
T Consensus       768 gh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~-ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~  846 (2131)
T KOG4369|consen  768 GHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKA-HADVEAQSDRTKDTMLSLACSGGRTRVVELLLNA  846 (2131)
T ss_pred             ccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhh-hhhhhhhcccccCceEEEecCCCcchHHHHHHHh
Confidence            68888999999988877 789999999999999999999999975 7888888899999999999999999999999999


Q ss_pred             hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCC-
Q 037504           81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSL-  158 (396)
Q Consensus        81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~-  158 (396)
                      |  ++-  ..++....|||.+|...|.+++++.|+..|+.++. ..-.+.|-.||++|..+|+.+.++.|++.+. .+. 
T Consensus       847 g--ank--ehrnvsDytPlsla~Sggy~~iI~~llS~GseInS-rtgSklgisPLmlatmngh~~at~~ll~~gsdiNaq  921 (2131)
T KOG4369|consen  847 G--ANK--EHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINS-RTGSKLGISPLMLATMNGHQAATLSLLQPGSDINAQ  921 (2131)
T ss_pred             h--ccc--cccchhhcCchhhhcCcchHHHHHHHhhccccccc-ccccccCcchhhhhhhccccHHHHHHhcccchhccc
Confidence            8  554  67788889999999999999999999999988653 2334578899999999999999999999887 211 


Q ss_pred             CCcchhHHHHHHh--------------------hccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHH
Q 037504          159 KDDDCIELLVKLI--------------------ETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALEL  218 (396)
Q Consensus       159 ~~~~g~~~l~~~~--------------------~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (396)
                      ...+.++.|-.++                    ....|.|||+-++..|                           .+++
T Consensus       922 IeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgG---------------------------yvdv  974 (2131)
T KOG4369|consen  922 IETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGG---------------------------YVDV  974 (2131)
T ss_pred             cccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCC---------------------------cccc
Confidence            1222211111110                    1122344444444444                           1222


Q ss_pred             HHHHHHHHHHhCCccccccc--CCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccc
Q 037504          219 VELLWENFLFKYPDLIWKFD--ENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNI  296 (396)
Q Consensus       219 ~~~ll~~ll~~~~~~i~~~d--~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~  296 (396)
                      =+.|     ...+++.|..-  ..-.|+|-+++..|+.++|+.|+...+.    +..++++|+|+|.+|+..|+...+.+
T Consensus       975 g~~l-----i~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~at----v~v~NkkG~T~Lwla~~Gg~lss~~i 1045 (2131)
T KOG4369|consen  975 GNLL-----IAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDAT----VRVPNKKGCTVLWLASAGGALSSCPI 1045 (2131)
T ss_pred             chhh-----hhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccc----eecccCCCCcccchhccCCccccchH
Confidence            2222     23344444332  2334556666666666666666655555    66789999999999999999888877


Q ss_pred             ccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH-HhHHHHH
Q 037504          297 VSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK-EHEELKK  346 (396)
Q Consensus       297 l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~-~~~~~~~  346 (396)
                      |                   +.+++|++..|+.-.|++..|.+ .|.++++
T Consensus      1046 l-------------------~~~~ad~d~qdnr~~S~~maafRKgh~~iVk 1077 (2131)
T KOG4369|consen 1046 L-------------------VSSVADADQQDNRTNSRTMAAFRKGHFAIVK 1077 (2131)
T ss_pred             H-------------------hhcccChhhhhcccccccHHHHHhchhheec
Confidence            7                   67888999999888888887654 4445444


No 52 
>TIGR00870 trp transient-receptor-potential calcium channel protein. after chronic exposure to capsaicin. (McCleskey and Gold, 1999).
Probab=99.90  E-value=9e-23  Score=207.43  Aligned_cols=240  Identities=19%  Similarity=0.152  Sum_probs=161.2

Q ss_pred             CCCcccccccc--CCCcc-cccccchHHH-HHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHH
Q 037504            3 HSAPLELHVYS--NPPVE-EIRTRRLKLY-RVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLV   78 (396)
Q Consensus         3 h~~~~~~~~~~--~~~~~-~~~~g~t~Lh-~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll   78 (396)
                      +.+.++.++..  +.+.. .|..|.|||| .|+..++.++++.|++. +.    . +..|.||||.|+.. ..+.++.++
T Consensus        29 ~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~-g~----~-~~~G~T~Lh~A~~~-~~~~v~~ll  101 (743)
T TIGR00870        29 DLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNL-SC----R-GAVGDTLLHAISLE-YVDAVEAIL  101 (743)
T ss_pred             CHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhC-CC----C-CCcChHHHHHHHhc-cHHHHHHHH
Confidence            34455555555  33333 5788999999 78888888888888765 54    3 78899999999873 333333333


Q ss_pred             HHhhh--cc------c-c-hhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccC-----------CCCCCCcHHHH
Q 037504           79 KKMKA--EN------L-D-LAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQ-----------DDKDRMLPIVG  137 (396)
Q Consensus        79 ~~~~~--~~------~-d-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~-----------~d~~g~tpLh~  137 (396)
                      .....  .+      + + ....+..|.||||+|+..|+.++|++|+++|++++....           ....|.||||.
T Consensus       102 ~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~  181 (743)
T TIGR00870       102 LHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNA  181 (743)
T ss_pred             HHHhhcccccCchhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHH
Confidence            32200  11      0 0 012235799999999999999999999999999763211           12368999999


Q ss_pred             HHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH-HH
Q 037504          138 AASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE-RA  215 (396)
Q Consensus       138 A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  215 (396)
                      |+..|+.+++++|++.++ .+..+..|             +||||+|+..+....                .   .. ..
T Consensus       182 Aa~~~~~~iv~lLl~~gadin~~d~~g-------------~T~Lh~A~~~~~~~~----------------~---~~~l~  229 (743)
T TIGR00870       182 AACLGSPSIVALLSEDPADILTADSLG-------------NTLLHLLVMENEFKA----------------E---YEELS  229 (743)
T ss_pred             HHHhCCHHHHHHHhcCCcchhhHhhhh-------------hHHHHHHHhhhhhhH----------------H---HHHHH
Confidence            999999999999999997 44455566             899999888651100                0   00 01


Q ss_pred             HHHHHHHHHHHHHhCCccc----ccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhc
Q 037504          216 LELVELLWENFLFKYPDLI----WKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGK  287 (396)
Q Consensus       216 ~~~~~~ll~~ll~~~~~~i----~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~  287 (396)
                      ..+.+.+++. +. .....    +..|.+|.||||+|+..|+.+++++|++.+..    ........+.|.+++..
T Consensus       230 ~~~~~~l~~l-l~-~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~~~----~kk~~a~~~~~~~~~~~  299 (743)
T TIGR00870       230 CQMYNFALSL-LD-KLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIKYK----QKKFVAWPNGQQLLSLY  299 (743)
T ss_pred             HHHHHHHHHH-Hh-ccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHHHh----cceeeccCcchHhHhhh
Confidence            1122222221 11 11222    56789999999999999999999999997766    33445566777776654


No 53 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.89  E-value=1.2e-22  Score=167.41  Aligned_cols=98  Identities=12%  Similarity=0.068  Sum_probs=64.7

Q ss_pred             ccccccccCCCCchHHHHHHHcCCH----HHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHH---HHHHHHhcCC
Q 037504           47 KDEIGDVITRLGDTALHVAAAANRI----DFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVE---LVKATMEGNE  119 (396)
Q Consensus        47 ~~~~~~~~~~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~---~v~~Ll~~g~  119 (396)
                      +.+++.. +.++.++||.||+.|+.    +++++|++.+  ..+  +.+|..|+||||+|+..|+.+   ++++|+++|+
T Consensus        10 ~~~~~~~-~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g--~~~--~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Ga   84 (166)
T PHA02743         10 NLGAVEI-DEDEQNTFLRICRTGNIYELMEVAPFISGDG--HLL--HRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGA   84 (166)
T ss_pred             chHHhhh-ccCCCcHHHHHHHcCCHHHHHHHHHHHhhcc--hhh--hccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCC
Confidence            4555555 56677777777777776    4444555555  444  667777777777777776644   3677777777


Q ss_pred             CCccccCCC-CCCCcHHHHHHhcCCHHHHHHHHh
Q 037504          120 DITMVPQDD-KDRMLPIVGAASLGHTEVVEFLYR  152 (396)
Q Consensus       120 ~~~~~~~~d-~~g~tpLh~A~~~~~~~~v~~Ll~  152 (396)
                      +   ++.+| ..|.||||+|+..++.+++++|++
T Consensus        85 d---in~~d~~~g~TpLh~A~~~g~~~iv~~Ll~  115 (166)
T PHA02743         85 D---INARELGTGNTLLHIAASTKNYELAEWLCR  115 (166)
T ss_pred             C---CCCCCCCCCCcHHHHHHHhCCHHHHHHHHh
Confidence            7   34444 367777777777777777777763


No 54 
>PHA02741 hypothetical protein; Provisional
Probab=99.89  E-value=1.5e-22  Score=167.73  Aligned_cols=130  Identities=16%  Similarity=0.134  Sum_probs=115.7

Q ss_pred             ccccccchHHHHHHHcCCHHHHHHHHHh-----CccccccccCCCCchHHHHHHHcCC----HHHHHHHHHHhhhcccch
Q 037504           18 EEIRTRRLKLYRVALNGDWARAKVIYDE-----HKDEIGDVITRLGDTALHVAAAANR----IDFVKKLVKKMKAENLDL   88 (396)
Q Consensus        18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~-----~~~~~~~~~~~~g~t~Lh~A~~~g~----~~~v~~Ll~~~~~~~~d~   88 (396)
                      .++..|.||||+|++.|+.++++.|+..     .+++++.+ |..|+||||+|+..|+    .+++++|++.|  +++  
T Consensus        16 ~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~-d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~g--adi--   90 (169)
T PHA02741         16 EKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNAT-DDAGQMCIHIAAEKHEAQLAAEIIDHLIELG--ADI--   90 (169)
T ss_pred             ccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhcc-CCCCCcHHHHHHHcCChHHHHHHHHHHHHcC--CCC--
Confidence            4577899999999999999999988642     36788888 8999999999999999    58899999988  776  


Q ss_pred             hcccC-CCCcHHHHHHHcCCHHHHHHHHh-cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           89 AKRNR-IGCTALFYAAASGSVELVKATME-GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        89 ~~~d~-~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      +.+|. .|.||||+|+..++.+++++|++ .|++   ++.+|..|+||||+|+..++.+++++|++.++
T Consensus        91 n~~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~---~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         91 NAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGID---LHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             CCCCcCCCCCHHHHHHHcCCHHHHHHHHhCCCCC---CCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence            88885 89999999999999999999997 5888   55567799999999999999999999999876


No 55 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.88  E-value=5.2e-23  Score=177.74  Aligned_cols=159  Identities=22%  Similarity=0.265  Sum_probs=105.1

Q ss_pred             hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc-----CCHHHHHHHHhhcccCCCCcch
Q 037504           89 AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL-----GHTEVVEFLYRETKNSLKDDDC  163 (396)
Q Consensus        89 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~-----~~~~~v~~Ll~~~~~~~~~~~g  163 (396)
                      |..|.+|+|+||||+..+++++|+.|++.|..-  ++.+++-|+||+++++..     .+.++|..|...|..+.+... 
T Consensus       262 NlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~--VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mgnVNaKAsQ-  338 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANFDVVSILLDSGVCD--VDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMGDVNAKASQ-  338 (452)
T ss_pred             hhhcCCCCeeeeeeecccchHHHHHHhccCccc--ccccccccccHHHHHHHHhhcchhhHHHHHHHHhccCcchhhhh-
Confidence            455666666666666666666666666665432  555555666666665542     345566666666553332211 


Q ss_pred             hHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCc
Q 037504          164 IELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHT  243 (396)
Q Consensus       164 ~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t  243 (396)
                                 .|+|+|++|+.+|                           ..++++.|+     .+++++|.+|.+|.|
T Consensus       339 -----------~gQTALMLAVSHG---------------------------r~d~vk~LL-----acgAdVNiQDdDGST  375 (452)
T KOG0514|consen  339 -----------HGQTALMLAVSHG---------------------------RVDMVKALL-----ACGADVNIQDDDGST  375 (452)
T ss_pred             -----------hcchhhhhhhhcC---------------------------cHHHHHHHH-----HccCCCccccCCccH
Confidence                       1256666666666                           345554443     467788888899999


Q ss_pred             HHHHHHHcCcHHHHHHHHhh-ccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504          244 IFHIAVSNRMREIFKFIFEI-SSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       244 ~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      +|++|+.+|+.|++++||.. ++|    +-..|.+|-|+|.+|...|+.||.-+|
T Consensus       376 ALMCA~EHGhkEivklLLA~p~cd----~sLtD~DgSTAl~IAleagh~eIa~ml  426 (452)
T KOG0514|consen  376 ALMCAAEHGHKEIVKLLLAVPSCD----ISLTDVDGSTALSIALEAGHREIAVML  426 (452)
T ss_pred             HHhhhhhhChHHHHHHHhccCccc----ceeecCCCchhhhhHHhcCchHHHHHH
Confidence            99999999999999988865 444    667888899999999999988876555


No 56 
>PHA02743 Viral ankyrin protein; Provisional
Probab=99.88  E-value=6.3e-22  Score=163.13  Aligned_cols=128  Identities=16%  Similarity=0.119  Sum_probs=111.2

Q ss_pred             cccccchHHHHHHHcCCHHHHH----HHHHhCccccccccCCCCchHHHHHHHcCCHHH---HHHHHHHhhhcccchhcc
Q 037504           19 EIRTRRLKLYRVALNGDWARAK----VIYDEHKDEIGDVITRLGDTALHVAAAANRIDF---VKKLVKKMKAENLDLAKR   91 (396)
Q Consensus        19 ~~~~g~t~Lh~A~~~g~~~~v~----~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~---v~~Ll~~~~~~~~d~~~~   91 (396)
                      .+..+.++||.||+.|+.+.++    .|+ ..+.+++.. |..|+||||+|+..|+.+.   +++|++.|  +++  +.+
T Consensus        16 ~~~~~~~~l~~a~~~g~~~~l~~~~~~l~-~~g~~~~~~-d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~G--adi--n~~   89 (166)
T PHA02743         16 IDEDEQNTFLRICRTGNIYELMEVAPFIS-GDGHLLHRY-DHHGRQCTHMVAWYDRANAVMKIELLVNMG--ADI--NAR   89 (166)
T ss_pred             hccCCCcHHHHHHHcCCHHHHHHHHHHHh-hcchhhhcc-CCCCCcHHHHHHHhCccCHHHHHHHHHHcC--CCC--CCC
Confidence            4567788999999999985544    444 458888877 8999999999999998654   88999998  777  888


Q ss_pred             c-CCCCcHHHHHHHcCCHHHHHHHHh-cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           92 N-RIGCTALFYAAASGSVELVKATME-GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        92 d-~~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      | ..|.||||+|+..|+.+++++|++ .|++   +..+|..|.||||+|+..++.+++++|++.++
T Consensus        90 d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad---~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga  152 (166)
T PHA02743         90 ELGTGNTLLHIAASTKNYELAEWLCRQLGVN---LGAINYQHETAYHIAYKMRDRRMMEILRANGA  152 (166)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhccCCC---ccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            8 589999999999999999999995 7998   55567799999999999999999999999998


No 57 
>PHA02741 hypothetical protein; Provisional
Probab=99.87  E-value=1.9e-21  Score=161.10  Aligned_cols=132  Identities=16%  Similarity=0.239  Sum_probs=110.5

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHh--hhcccchhcccCCCCcHHHHHHHcCC----HHHHHHHHhcCCCCccccCCC
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKM--KAENLDLAKRNRIGCTALFYAAASGS----VELVKATMEGNEDITMVPQDD  128 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~--~~~~~d~~~~d~~g~tpLh~A~~~g~----~~~v~~Ll~~g~~~~~~~~~d  128 (396)
                      +..|.||||+|++.|+.++++.|+...  .....+++.+|..|.||||+|+..|+    .+++++|++.|++   ++.++
T Consensus        18 ~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gad---in~~~   94 (169)
T PHA02741         18 NSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGAD---INAQE   94 (169)
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCC---CCCCC
Confidence            788999999999999999999987532  00123348999999999999999998    5899999999999   45555


Q ss_pred             C-CCCcHHHHHHhcCCHHHHHHHHhh-cccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhcc
Q 037504          129 K-DRMLPIVGAASLGHTEVVEFLYRE-TKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLG  206 (396)
Q Consensus       129 ~-~g~tpLh~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~  206 (396)
                      . .|+||||+|+..++.+++++|+.. ++                                                   
T Consensus        95 ~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~---------------------------------------------------  123 (169)
T PHA02741         95 MLEGDTALHLAAHRRDHDLAEWLCCQPGI---------------------------------------------------  123 (169)
T ss_pred             cCCCCCHHHHHHHcCCHHHHHHHHhCCCC---------------------------------------------------
Confidence            3 899999999999999999999863 32                                                   


Q ss_pred             chhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccc
Q 037504          207 AKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSV  266 (396)
Q Consensus       207 ~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  266 (396)
                                                +++.+|.+|+||||+|+..++.+++++|++.++.
T Consensus       124 --------------------------~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741        124 --------------------------DLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             --------------------------CCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence                                      3456678899999999999999999999988765


No 58 
>KOG0514 consensus Ankyrin repeat protein [General function prediction only]
Probab=99.87  E-value=6.9e-22  Score=170.81  Aligned_cols=163  Identities=26%  Similarity=0.301  Sum_probs=124.2

Q ss_pred             cccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH-----cCCHHHHHHHHhcCCCCccc
Q 037504           50 IGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA-----SGSVELVKATMEGNEDITMV  124 (396)
Q Consensus        50 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~-----~g~~~~v~~Ll~~g~~~~~~  124 (396)
                      +|.. |.+|+|+||||+.++++++|+.||+.|   -.|++.+|+.|+||+++|+.     ..+.++|..|..-| +++.-
T Consensus       261 VNla-DsNGNTALHYsVSHaNF~VV~~LLDSg---vC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaK  335 (452)
T KOG0514|consen  261 VNLA-DSNGNTALHYAVSHANFDVVSILLDSG---VCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAK  335 (452)
T ss_pred             hhhh-cCCCCeeeeeeecccchHHHHHHhccC---cccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchh
Confidence            3445 788888888888888888888888876   33458888888888888764     24567777777765 43433


Q ss_pred             cCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhh
Q 037504          125 PQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYF  203 (396)
Q Consensus       125 ~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~  203 (396)
                      ..+  .|+|+|++|+.+|+.++|+.||.+++ .++.|.+|             .|+|++|+++|                
T Consensus       336 AsQ--~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDG-------------STALMCA~EHG----------------  384 (452)
T KOG0514|consen  336 ASQ--HGQTALMLAVSHGRVDMVKALLACGADVNIQDDDG-------------STALMCAAEHG----------------  384 (452)
T ss_pred             hhh--hcchhhhhhhhcCcHHHHHHHHHccCCCccccCCc-------------cHHHhhhhhhC----------------
Confidence            333  78888888888888888888888888 77777777             78888888888                


Q ss_pred             hccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhh
Q 037504          204 NLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEI  263 (396)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~  263 (396)
                              |   .++++.|+    ....+++...|.+|.|+|.+|...|+.+|.-+|..+
T Consensus       385 --------h---kEivklLL----A~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  385 --------H---KEIVKLLL----AVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             --------h---HHHHHHHh----ccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence                    2   45554443    456778888999999999999999999998888654


No 59 
>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]
Probab=99.86  E-value=1.5e-22  Score=195.91  Aligned_cols=263  Identities=17%  Similarity=0.129  Sum_probs=211.6

Q ss_pred             ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhc-ccCCCCcH
Q 037504           20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAK-RNRIGCTA   98 (396)
Q Consensus        20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~-~d~~g~tp   98 (396)
                      ..+-.|+|-.||..|+.|+|+.|+.+ |+++..+ |+.|.+||.+|+-.||..+|+.|+...  +++  +. .|+.+.|+
T Consensus       754 e~n~~t~LT~acaggh~e~vellv~r-ganiehr-dkkgf~plImaatagh~tvV~~llk~h--a~v--eaQsdrtkdt~  827 (2131)
T KOG4369|consen  754 EPNIKTNLTSACAGGHREEVELLVVR-GANIEHR-DKKGFVPLIMAATAGHITVVQDLLKAH--ADV--EAQSDRTKDTM  827 (2131)
T ss_pred             CccccccccccccCccHHHHHHHHHh-ccccccc-ccccchhhhhhcccCchHHHHHHHhhh--hhh--hhhcccccCce
Confidence            33457899999999999999999976 8999888 999999999999999999999999986  555  54 57889999


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCC--CCcchhHHHHHHhhccc
Q 037504           99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSL--KDDDCIELLVKLIETDS  175 (396)
Q Consensus        99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~--~~~~g~~~l~~~~~~~~  175 (396)
                      |.+||..|+.++|++||..|++   -..++-...|||-+|...|+.+++..|+..|. .+.  -.+-|            
T Consensus       828 lSlacsggr~~vvelLl~~gan---kehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklg------------  892 (2131)
T KOG4369|consen  828 LSLACSGGRTRVVELLLNAGAN---KEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLG------------  892 (2131)
T ss_pred             EEEecCCCcchHHHHHHHhhcc---ccccchhhcCchhhhcCcchHHHHHHHhhcccccccccccccC------------
Confidence            9999999999999999999998   44555688999999999999999999999997 222  11223            


Q ss_pred             hhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccc-cCCCCcHHHHHHHcCcH
Q 037504          176 YETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKF-DENGHTIFHIAVSNRMR  254 (396)
Q Consensus       176 ~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~-d~~g~t~Lh~A~~~~~~  254 (396)
                       -.||.+|..+|                        |...   ++.+     ...+.+||.. ..+-+|+|-+|+..|..
T Consensus       893 -isPLmlatmng------------------------h~~a---t~~l-----l~~gsdiNaqIeTNrnTaltla~fqgr~  939 (2131)
T KOG4369|consen  893 -ISPLMLATMNG------------------------HQAA---TLSL-----LQPGSDINAQIETNRNTALTLALFQGRP  939 (2131)
T ss_pred             -cchhhhhhhcc------------------------ccHH---HHHH-----hcccchhccccccccccceeeccccCcc
Confidence             78999999999                        3222   2222     2346666654 45677888888888888


Q ss_pred             HHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccccc---------------chhHhHHHHHHHHHHHhhhcc
Q 037504          255 EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVS---------------VAALQLQRELLWFQEVKKVVP  319 (396)
Q Consensus       255 ~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~---------------~~~~~~~~~l~~~~~v~~l~~  319 (396)
                      +++.+||.+.++    +..+-+.|.|||.-++..|.+++=.+|.               ++++.+.++-++.+.|..++.
T Consensus       940 evv~lLLa~~an----vehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln 1015 (2131)
T KOG4369|consen  940 EVVFLLLAAQAN----VEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLN 1015 (2131)
T ss_pred             hHHHHHHHHhhh----hhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhC
Confidence            888888888777    6778888888888888888887776662               245555666666777777775


Q ss_pred             -hhhhhhhcCCCCCchhhHHHH
Q 037504          320 -RKFAEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       320 -~~~~~~~~~~g~tpl~~a~~~  340 (396)
                       .+-+..+|++|.|+|.+|+..
T Consensus      1016 ~~atv~v~NkkG~T~Lwla~~G 1037 (2131)
T KOG4369|consen 1016 GDATVRVPNKKGCTVLWLASAG 1037 (2131)
T ss_pred             CccceecccCCCCcccchhccC
Confidence             478999999999999998754


No 60 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.86  E-value=8.9e-22  Score=160.76  Aligned_cols=130  Identities=15%  Similarity=0.125  Sum_probs=106.4

Q ss_pred             ccccccchHHHHHHHcCCHHHHHHHHH----hCccccccccCCCCchHHHHHHHcCCH---HHHHHHHHHhhhcccchhc
Q 037504           18 EEIRTRRLKLYRVALNGDWARAKVIYD----EHKDEIGDVITRLGDTALHVAAAANRI---DFVKKLVKKMKAENLDLAK   90 (396)
Q Consensus        18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~----~~~~~~~~~~~~~g~t~Lh~A~~~g~~---~~v~~Ll~~~~~~~~d~~~   90 (396)
                      ..+..|.||||+|++.|+...+..+..    ..+..++.. |.+|.||||+|+..|+.   +++++|++.|  +++  +.
T Consensus        12 ~~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~-d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~g--adi--n~   86 (154)
T PHA02736         12 EPDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEY-NRHGKQCVHIVSNPDKADPQEKLKLLMEWG--ADI--NG   86 (154)
T ss_pred             hcCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHh-cCCCCEEEEeecccCchhHHHHHHHHHHcC--CCc--cc
Confidence            357789999999999998533221111    112223445 88999999999999987   4688999998  776  88


Q ss_pred             cc-CCCCcHHHHHHHcCCHHHHHHHHh-cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           91 RN-RIGCTALFYAAASGSVELVKATME-GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        91 ~d-~~g~tpLh~A~~~g~~~~v~~Ll~-~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      +| ..|.||||+|+..|+.+++++|++ .|++   ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus        87 ~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d---~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga  150 (154)
T PHA02736         87 KERVFGNTPLHIAVYTQNYELATWLCNQPGVN---MEILNYAFKTPYYVACERHDAKMMNILRAKGA  150 (154)
T ss_pred             cCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCC---CccccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            88 489999999999999999999998 4888   55667799999999999999999999999886


No 61 
>PHA02736 Viral ankyrin protein; Provisional
Probab=99.86  E-value=2.3e-21  Score=158.38  Aligned_cols=132  Identities=14%  Similarity=0.111  Sum_probs=105.6

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcc---cchhcccCCCCcHHHHHHHcCCH---HHHHHHHhcCCCCccccCCC
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAEN---LDLAKRNRIGCTALFYAAASGSV---ELVKATMEGNEDITMVPQDD  128 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~---~d~~~~d~~g~tpLh~A~~~g~~---~~v~~Ll~~g~~~~~~~~~d  128 (396)
                      |.+|.||||+|++.|+.  +.++...+...+   ..++.+|.+|.||||+|+..|+.   +++++|++.|++   ++.+|
T Consensus        14 d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gad---in~~~   88 (154)
T PHA02736         14 DIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGAD---INGKE   88 (154)
T ss_pred             CCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCC---ccccC
Confidence            78899999999999984  344333321011   11356789999999999999987   468999999999   55555


Q ss_pred             -CCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccc
Q 037504          129 -KDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGA  207 (396)
Q Consensus       129 -~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~  207 (396)
                       ..|.||||+|+..++.+++++|+...                                                     
T Consensus        89 ~~~g~T~Lh~A~~~~~~~i~~~Ll~~~-----------------------------------------------------  115 (154)
T PHA02736         89 RVFGNTPLHIAVYTQNYELATWLCNQP-----------------------------------------------------  115 (154)
T ss_pred             CCCCCcHHHHHHHhCCHHHHHHHHhCC-----------------------------------------------------
Confidence             48999999999999999999998631                                                     


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcccc
Q 037504          208 KAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVA  267 (396)
Q Consensus       208 ~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~  267 (396)
                                             +.+++.+|..|+||||+|+..|+.+++++|+++|++.
T Consensus       116 -----------------------g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736        116 -----------------------GVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             -----------------------CCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence                                   2235667889999999999999999999999999984


No 62 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.86  E-value=1.2e-20  Score=167.37  Aligned_cols=151  Identities=12%  Similarity=0.095  Sum_probs=92.6

Q ss_pred             CCCCchH-HHHHHHcCCHHHHHHHHHHhhhcccchhcc----cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCC-C
Q 037504           55 TRLGDTA-LHVAAAANRIDFVKKLVKKMKAENLDLAKR----NRIGCTALFYAAASGSVELVKATMEGNEDITMVPQD-D  128 (396)
Q Consensus        55 ~~~g~t~-Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~----d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~-d  128 (396)
                      |..|.|+ ||.|+..|+.+++++|++.|  +++  +.+    +..|.||||+|+..++.+++++|+++|++++   .+ +
T Consensus        29 d~~~~~~lL~~A~~~~~~eivk~LL~~G--Adi--N~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN---~~~~  101 (300)
T PHA02884         29 NKICIANILYSSIKFHYTDIIDAILKLG--ADP--EAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVN---RYAE  101 (300)
T ss_pred             CcCCCCHHHHHHHHcCCHHHHHHHHHCC--CCc--cccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcC---cccC
Confidence            4444443 45555566777777777776  555  554    3467777777777777777777777777633   22 2


Q ss_pred             CCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccc
Q 037504          129 KDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGA  207 (396)
Q Consensus       129 ~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~  207 (396)
                      ..|.||||+|+..++.+++++|++.|+ .+..+..|             .||||+|++.+.                   
T Consensus       102 ~~g~TpLh~Aa~~~~~eivklLL~~GAdin~kd~~G-------------~TpL~~A~~~~~-------------------  149 (300)
T PHA02884        102 EAKITPLYISVLHGCLKCLEILLSYGADINIQTNDM-------------VTPIELALMICN-------------------  149 (300)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-------------CCHHHHHHHhCC-------------------
Confidence            356777777777777777777777766 44455555             667777666541                   


Q ss_pred             hhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcc
Q 037504          208 KAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISS  265 (396)
Q Consensus       208 ~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~  265 (396)
                              .+++. ++      .+.   ..+..+.+|++++   ++.+++++|++++.
T Consensus       150 --------~~~~~-~~------~~~---~~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        150 --------NFLAF-MI------CDN---EISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             --------hhHHH-Hh------cCC---cccccccChhhhh---ccHHHHHHHHHHHH
Confidence                    11111 10      111   2356677788865   46788899988876


No 63 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.84  E-value=3.8e-20  Score=143.92  Aligned_cols=142  Identities=22%  Similarity=0.245  Sum_probs=121.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA  104 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~  104 (396)
                      -.+.+|+..+....|+.||+.....+|.+ |.+|.||||-|+++|+.+||+.|+..|  ++.  +.+...|+||||-||.
T Consensus        65 rl~lwaae~nrl~eV~~lL~e~an~vNtr-D~D~YTpLHRAaYn~h~div~~ll~~g--An~--~a~T~~GWTPLhSAck  139 (228)
T KOG0512|consen   65 RLLLWAAEKNRLTEVQRLLSEKANHVNTR-DEDEYTPLHRAAYNGHLDIVHELLLSG--ANK--EAKTNEGWTPLHSACK  139 (228)
T ss_pred             HHHHHHHhhccHHHHHHHHHhcccccccc-ccccccHHHHHHhcCchHHHHHHHHcc--CCc--ccccccCccchhhhhc
Confidence            35679999999999999999988888988 999999999999999999999999998  777  9999999999999999


Q ss_pred             cCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCC-HHHHHHHHhhcc--cCCCCcchhHHHHHHhhccchhhHHH
Q 037504          105 SGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGH-TEVVEFLYRETK--NSLKDDDCIELLVKLIETDSYETALH  181 (396)
Q Consensus       105 ~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~-~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~~~~~~t~L~  181 (396)
                      .++.+++-.|+++|+|   ++......+||||+|+...+ ...+.+|+....  .......+             .||+.
T Consensus       140 WnN~~va~~LLqhgaD---VnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~e-------------eta~~  203 (228)
T KOG0512|consen  140 WNNFEVAGRLLQHGAD---VNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLE-------------ETAFD  203 (228)
T ss_pred             ccchhHHHHHHhccCc---ccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCcc-------------chHHH
Confidence            9999999999999999   55566678999999998765 456677766554  23333444             78888


Q ss_pred             HHHhcC
Q 037504          182 VLARKN  187 (396)
Q Consensus       182 ~a~~~~  187 (396)
                      +|.+.+
T Consensus       204 iARRT~  209 (228)
T KOG0512|consen  204 IARRTS  209 (228)
T ss_pred             HHHHhh
Confidence            887765


No 64 
>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]
Probab=99.84  E-value=1.8e-20  Score=145.75  Aligned_cols=143  Identities=20%  Similarity=0.105  Sum_probs=117.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchh
Q 037504           98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYE  177 (396)
Q Consensus        98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~  177 (396)
                      -+-||+..+.+.-|+.|++..++.  ++.+|.+|.||||.|+.+|+.++++.|+..++                      
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~--vNtrD~D~YTpLHRAaYn~h~div~~ll~~gA----------------------  121 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANH--VNTRDEDEYTPLHRAAYNGHLDIVHELLLSGA----------------------  121 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhcccc--ccccccccccHHHHHHhcCchHHHHHHHHccC----------------------
Confidence            467889999999999999888875  88889999999999999999999998887665                      


Q ss_pred             hHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHH
Q 037504          178 TALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIF  257 (396)
Q Consensus       178 t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v  257 (396)
                                                                             +.+.+...|+||||.||..++.+++
T Consensus       122 -------------------------------------------------------n~~a~T~~GWTPLhSAckWnN~~va  146 (228)
T KOG0512|consen  122 -------------------------------------------------------NKEAKTNEGWTPLHSACKWNNFEVA  146 (228)
T ss_pred             -------------------------------------------------------CcccccccCccchhhhhcccchhHH
Confidence                                                                   2445677899999999999999999


Q ss_pred             HHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhH
Q 037504          258 KFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLF  337 (396)
Q Consensus       258 ~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a  337 (396)
                      .+|+.+|+|    ||+..+...||||+||...+......+                 -......++..++..+.||+++|
T Consensus       147 ~~LLqhgaD----VnA~t~g~ltpLhlaa~~rn~r~t~~~-----------------Ll~dryi~pg~~nn~eeta~~iA  205 (228)
T KOG0512|consen  147 GRLLQHGAD----VNAQTKGLLTPLHLAAGNRNSRDTLEL-----------------LLHDRYIHPGLKNNLEETAFDIA  205 (228)
T ss_pred             HHHHhccCc----ccccccccchhhHHhhcccchHHHHHH-----------------HhhccccChhhhcCccchHHHHH
Confidence            999999999    899999999999999988764322111                 00224567788999999999999


Q ss_pred             HHH
Q 037504          338 IKE  340 (396)
Q Consensus       338 ~~~  340 (396)
                      .+.
T Consensus       206 RRT  208 (228)
T KOG0512|consen  206 RRT  208 (228)
T ss_pred             HHh
Confidence            764


No 65 
>PHA02884 ankyrin repeat protein; Provisional
Probab=99.83  E-value=7e-20  Score=162.50  Aligned_cols=152  Identities=14%  Similarity=0.124  Sum_probs=107.5

Q ss_pred             hcccCCCCc-HHHHHHHcCCHHHHHHHHhcCCCCccccC-CCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCC-Ccchh
Q 037504           89 AKRNRIGCT-ALFYAAASGSVELVKATMEGNEDITMVPQ-DDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLK-DDDCI  164 (396)
Q Consensus        89 ~~~d~~g~t-pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~-~~~g~  164 (396)
                      ..+|..|.| +||.|++.|+.+++++|+++|++++.... .|..|.||||+|+..++.+++++|+++|+ .+.. +..| 
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g-  104 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK-  104 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCC-
Confidence            556777776 45666777889999999999998553221 24579999999999999999999999888 3332 2345 


Q ss_pred             HHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcH
Q 037504          165 ELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTI  244 (396)
Q Consensus       165 ~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~  244 (396)
                                  .||||+|+..+                           ..++++.++     ..+++++.+|..|.||
T Consensus       105 ------------~TpLh~Aa~~~---------------------------~~eivklLL-----~~GAdin~kd~~G~Tp  140 (300)
T PHA02884        105 ------------ITPLYISVLHG---------------------------CLKCLEILL-----SYGADINIQTNDMVTP  140 (300)
T ss_pred             ------------CCHHHHHHHcC---------------------------CHHHHHHHH-----HCCCCCCCCCCCCCCH
Confidence                        78888888777                           355555554     4577888888888888


Q ss_pred             HHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504          245 FHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       245 Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      ||+|++.++.+++..+..  .       ..+..+.+|++++   ++.+++++|
T Consensus       141 L~~A~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~---~n~ei~~~L  181 (300)
T PHA02884        141 IELALMICNNFLAFMICD--N-------EISNFYKHPKKIL---INFDILKIL  181 (300)
T ss_pred             HHHHHHhCChhHHHHhcC--C-------cccccccChhhhh---ccHHHHHHH
Confidence            888888777777655542  2       1356677788765   245555554


No 66 
>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=99.83  E-value=3.1e-20  Score=168.80  Aligned_cols=204  Identities=20%  Similarity=0.196  Sum_probs=156.6

Q ss_pred             CcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCC
Q 037504           16 PVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIG   95 (396)
Q Consensus        16 ~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g   95 (396)
                      +...+.+|.|+||.++...+.++|+++++. +++||.. |..|+||||.|+..|+..++++|+..|  +++  -..|.+|
T Consensus        66 ~~~~n~DglTalhq~~id~~~e~v~~l~e~-ga~Vn~~-d~e~wtPlhaaascg~~~i~~~li~~g--A~~--~avNsdg  139 (527)
T KOG0505|consen   66 PNLCNVDGLTALHQACIDDNLEMVKFLVEN-GANVNAQ-DNEGWTPLHAAASCGYLNIVEYLIQHG--ANL--LAVNSDG  139 (527)
T ss_pred             ccccCCccchhHHHHHhcccHHHHHHHHHh-cCCcccc-ccccCCcchhhcccccHHHHHHHHHhh--hhh--hhccCCC
Confidence            355688899999999999999999999986 9999999 999999999999999999999999999  777  8889999


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhc-CCCCccccCCCCCCCcHHHHHHhcCC---HHHHHHHHhhcc-cCCCCcchhHHHHHH
Q 037504           96 CTALFYAAASGSVELVKATMEG-NEDITMVPQDDKDRMLPIVGAASLGH---TEVVEFLYRETK-NSLKDDDCIELLVKL  170 (396)
Q Consensus        96 ~tpLh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~tpLh~A~~~~~---~~~v~~Ll~~~~-~~~~~~~g~~~l~~~  170 (396)
                      ..|+-.+...-..+++..-... |.++              -.+-....   .+-+...+..|. .+.....|       
T Consensus       140 ~~P~dl~e~ea~~~~l~~~~~r~gi~i--------------ea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG-------  198 (527)
T KOG0505|consen  140 NMPYDLAEDEATLDVLETEMARQGIDI--------------EAARKAEEQTMLDDARQWLNAGAELDARHARG-------  198 (527)
T ss_pred             CCccccccCcchhHHHHHHHHHhcccH--------------HHHhhhhHHHHHHHHHHHHhcccccccccccc-------
Confidence            9998887655444444333321 2221              11111111   111223333555 44444445       


Q ss_pred             hhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHH
Q 037504          171 IETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVS  250 (396)
Q Consensus       171 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~  250 (396)
                            .|.||.|+.+|                           +.++...|+     ..+..++.+|.+|+||||.|+.
T Consensus       199 ------~T~lHvAaa~G---------------------------y~e~~~lLl-----~ag~~~~~~D~dgWtPlHAAA~  240 (527)
T KOG0505|consen  199 ------ATALHVAAANG---------------------------YTEVAALLL-----QAGYSVNIKDYDGWTPLHAAAH  240 (527)
T ss_pred             ------chHHHHHHhhh---------------------------HHHHHHHHH-----HhccCcccccccCCCcccHHHH
Confidence                  78889988888                           455555443     4577889999999999999999


Q ss_pred             cCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504          251 NRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL  288 (396)
Q Consensus       251 ~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~  288 (396)
                      .|+.+++++|+++|++    ++.+.+.|.|||.+|...
T Consensus       241 Wg~~~~~elL~~~ga~----~d~~t~~g~~p~dv~dee  274 (527)
T KOG0505|consen  241 WGQEDACELLVEHGAD----MDAKTKMGETPLDVADEE  274 (527)
T ss_pred             hhhHhHHHHHHHhhcc----cchhhhcCCCCccchhhh
Confidence            9999999999999999    788999999999998764


No 67 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.80  E-value=3.7e-20  Score=155.49  Aligned_cols=66  Identities=24%  Similarity=0.372  Sum_probs=46.9

Q ss_pred             chhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           87 DLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        87 d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      |+|.-|..|.+||||||+.|+..+++.|+.+|+.+   +..+.-..||||+|+..|+.++|+.|++..+
T Consensus        26 dln~gddhgfsplhwaakegh~aivemll~rgarv---n~tnmgddtplhlaaahghrdivqkll~~ka   91 (448)
T KOG0195|consen   26 DLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARV---NSTNMGDDTPLHLAAAHGHRDIVQKLLSRKA   91 (448)
T ss_pred             ccccccccCcchhhhhhhcccHHHHHHHHhccccc---ccccCCCCcchhhhhhcccHHHHHHHHHHhc
Confidence            44777777777777777777777777777777774   3334455677777777777777777776544


No 68 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.75  E-value=7.3e-18  Score=124.06  Aligned_cols=85  Identities=34%  Similarity=0.518  Sum_probs=65.8

Q ss_pred             HHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcC
Q 037504           27 LYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASG  106 (396)
Q Consensus        27 Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g  106 (396)
                      ||+|++.|+.++++.|++. +.+++.     |+||||+|+..|+.+++++|++.|  +++  +.+|..|+||||+|+..|
T Consensus         1 L~~A~~~~~~~~~~~ll~~-~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEK-GADINL-----GNTALHYAAENGNLEIVKLLLENG--ADI--NSQDKNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHT-TSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTT--TCT--T-BSTTSSBHHHHHHHTT
T ss_pred             CHHHHHcCCHHHHHHHHHC-cCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhc--ccc--cccCCCCCCHHHHHHHcC
Confidence            6888888888888888874 554432     778888888888888888888877  665  778888888888888888


Q ss_pred             CHHHHHHHHhcCCCC
Q 037504          107 SVELVKATMEGNEDI  121 (396)
Q Consensus       107 ~~~~v~~Ll~~g~~~  121 (396)
                      +.+++++|+++|+++
T Consensus        71 ~~~~~~~Ll~~g~~~   85 (89)
T PF12796_consen   71 NLEIVKLLLEHGADV   85 (89)
T ss_dssp             HHHHHHHHHHTTT-T
T ss_pred             CHHHHHHHHHcCCCC
Confidence            888888888888874


No 69 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.75  E-value=2.4e-17  Score=129.40  Aligned_cols=123  Identities=32%  Similarity=0.428  Sum_probs=111.3

Q ss_pred             ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHH
Q 037504           20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTAL   99 (396)
Q Consensus        20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpL   99 (396)
                      +..|.||||.|+..|+.++++.|++. +.+.+.. +..|.||||+|+..++.+++++|++.+  ..+  +..+..|.||+
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~-~~~~~~~-~~~g~~~l~~a~~~~~~~~~~~ll~~~--~~~--~~~~~~~~~~l   77 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLEN-GADVNAK-DNDGRTPLHLAAKNGHLEIVKLLLEKG--ADV--NARDKDGNTPL   77 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcC--CCc--cccCCCCCCHH
Confidence            46799999999999999999999975 6666666 889999999999999999999999998  655  88889999999


Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q 037504          100 FYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLY  151 (396)
Q Consensus       100 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll  151 (396)
                      |+|+..++.+++++|++++.+   ++..|..|.||+++|...++.+++++|+
T Consensus        78 ~~a~~~~~~~~~~~L~~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          78 HLAARNGNLDVVKLLLKHGAD---VNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHcCcHHHHHHHHHcCCC---CcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            999999999999999999977   5556778999999999999999999885


No 70 
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.74  E-value=2.7e-18  Score=144.34  Aligned_cols=113  Identities=23%  Similarity=0.256  Sum_probs=90.6

Q ss_pred             cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCC
Q 037504           17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGC   96 (396)
Q Consensus        17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~   96 (396)
                      ...|+.|.+|||+||+.|+..+|+.||.+ |+.+|.. +....||||+|+..||-++|+.|++..  +++  |..|..|+
T Consensus        28 n~gddhgfsplhwaakegh~aivemll~r-garvn~t-nmgddtplhlaaahghrdivqkll~~k--adv--navnehgn  101 (448)
T KOG0195|consen   28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSR-GARVNST-NMGDDTPLHLAAAHGHRDIVQKLLSRK--ADV--NAVNEHGN  101 (448)
T ss_pred             ccccccCcchhhhhhhcccHHHHHHHHhc-ccccccc-cCCCCcchhhhhhcccHHHHHHHHHHh--ccc--chhhccCC
Confidence            33566788888888888888888888875 8888877 777788888888888888888888876  666  88888888


Q ss_pred             cHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHH
Q 037504           97 TALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGA  138 (396)
Q Consensus        97 tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A  138 (396)
                      |||||||..|.-.+++-|+..|+.++ +.  +++|.|||.-|
T Consensus       102 tplhyacfwgydqiaedli~~ga~v~-ic--nk~g~tpldka  140 (448)
T KOG0195|consen  102 TPLHYACFWGYDQIAEDLISCGAAVN-IC--NKKGMTPLDKA  140 (448)
T ss_pred             CchhhhhhhcHHHHHHHHHhccceee-ec--ccCCCCchhhh
Confidence            88888888888888888888888754 33  33788888766


No 71 
>PF12796 Ank_2:  Ankyrin repeats (3 copies);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....
Probab=99.73  E-value=2.6e-17  Score=121.09  Aligned_cols=83  Identities=34%  Similarity=0.505  Sum_probs=76.1

Q ss_pred             HHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc
Q 037504           62 LHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL  141 (396)
Q Consensus        62 Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~  141 (396)
                      ||+|++.|+.+++++|++.+  .++  +.    |+||||+|+..|+.+++++|+++|++   ++.+|..|+||||+|+..
T Consensus         1 L~~A~~~~~~~~~~~ll~~~--~~~--~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~   69 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKG--ADI--NL----GNTALHYAAENGNLEIVKLLLENGAD---INSQDKNGNTALHYAAEN   69 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTT--STT--TS----SSBHHHHHHHTTTHHHHHHHHHTTTC---TT-BSTTSSBHHHHHHHT
T ss_pred             CHHHHHcCCHHHHHHHHHCc--CCC--CC----CCCHHHHHHHcCCHHHHHHHHHhccc---ccccCCCCCCHHHHHHHc
Confidence            79999999999999999987  666  33    89999999999999999999999999   556677999999999999


Q ss_pred             CCHHHHHHHHhhcc
Q 037504          142 GHTEVVEFLYRETK  155 (396)
Q Consensus       142 ~~~~~v~~Ll~~~~  155 (396)
                      |+.+++++|+++|+
T Consensus        70 ~~~~~~~~Ll~~g~   83 (89)
T PF12796_consen   70 GNLEIVKLLLEHGA   83 (89)
T ss_dssp             THHHHHHHHHHTTT
T ss_pred             CCHHHHHHHHHcCC
Confidence            99999999999987


No 72 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.73  E-value=1.9e-17  Score=158.00  Aligned_cols=205  Identities=21%  Similarity=0.242  Sum_probs=131.3

Q ss_pred             chHHHHHHHcCCHHHHHHHHHhC--------ccccccccCCCCchHHHHHHHc---CCHHHHHHHHHHhhhcccchh---
Q 037504           24 RLKLYRVALNGDWARAKVIYDEH--------KDEIGDVITRLGDTALHVAAAA---NRIDFVKKLVKKMKAENLDLA---   89 (396)
Q Consensus        24 ~t~Lh~A~~~g~~~~v~~ll~~~--------~~~~~~~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~d~~---   89 (396)
                      +.++..|...+..+.+..++...        -.+++.+ ...|.|+||.|..+   ++.++++.|++..  +.+ +|   
T Consensus       102 ~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~R-Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~--p~l-ind~~  177 (782)
T KOG3676|consen  102 RDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNER-GATGETLLHKALLNLSDGHNELARVLLEIF--PKL-INDIY  177 (782)
T ss_pred             hhhhhhccccccHHHHhccchhhhhhhhhhhhhccccc-cchhhhHHHHHHhcCchhHHHHHHHHHHHh--HHH-hhhhh
Confidence            37888888888888887777542        1455555 67899999999874   5568999999876  333 12   


Q ss_pred             -cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcccc------CCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcc
Q 037504           90 -KRNRIGCTALFYAAASGSVELVKATMEGNEDITMVP------QDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDD  162 (396)
Q Consensus        90 -~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~  162 (396)
                       .....|+||||+|+.+.+.++|++|++.|||++...      ..|..+.                       ....+..
T Consensus       178 ~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~-----------------------rk~T~Y~  234 (782)
T KOG3676|consen  178 TSEEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKAS-----------------------RKSTNYT  234 (782)
T ss_pred             hhHhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCccccccc-----------------------ccccCCc
Confidence             234679999999999999999999999999954210      0010000                       0000001


Q ss_pred             hhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCC
Q 037504          163 CIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGH  242 (396)
Q Consensus       163 g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~  242 (396)
                      |        .-..|+.||.+||-.+                           ..++++.+++     ++++++.+|..|+
T Consensus       235 G--------~~YfGEyPLSfAAC~n---------------------------q~eivrlLl~-----~gAd~~aqDS~GN  274 (782)
T KOG3676|consen  235 G--------YFYFGEYPLSFAACTN---------------------------QPEIVRLLLA-----HGADPNAQDSNGN  274 (782)
T ss_pred             c--------eeeeccCchHHHHHcC---------------------------CHHHHHHHHh-----cCCCCCccccCCC
Confidence            1        0011255555555443                           2444444432     4566777777777


Q ss_pred             cHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504          243 TIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV  297 (396)
Q Consensus       243 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l  297 (396)
                      |.||..+.+-..++..+++++|+..  +...+|+.|-|||-+|++.|..++.+.+
T Consensus       275 TVLH~lVi~~~~~My~~~L~~ga~~--l~~v~N~qgLTPLtLAaklGk~emf~~i  327 (782)
T KOG3676|consen  275 TVLHMLVIHFVTEMYDLALELGANA--LEHVRNNQGLTPLTLAAKLGKKEMFQHI  327 (782)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcCCCc--cccccccCCCChHHHHHHhhhHHHHHHH
Confidence            7777777776677777777777762  2445677777777777777776665544


No 73 
>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=99.71  E-value=1.8e-16  Score=151.36  Aligned_cols=130  Identities=21%  Similarity=0.216  Sum_probs=110.3

Q ss_pred             cccccchHHHHHHHc---CCHHHHHHHHHhCcccccccc---CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcc-
Q 037504           19 EIRTRRLKLYRVALN---GDWARAKVIYDEHKDEIGDVI---TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKR-   91 (396)
Q Consensus        19 ~~~~g~t~Lh~A~~~---g~~~~v~~ll~~~~~~~~~~~---~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~-   91 (396)
                      +...|.|.||.|..+   ++.++++.||+..+..+|..-   ...|.||||+|+.+.+.++|++|++.|  +++  +.+ 
T Consensus       139 RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~eeY~GqSaLHiAIv~~~~~~V~lLl~~g--ADV--~aRa  214 (782)
T KOG3676|consen  139 RGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSEEYYGQSALHIAIVNRDAELVRLLLAAG--ADV--HARA  214 (782)
T ss_pred             ccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhHhhcCcchHHHHHHhccHHHHHHHHHcC--Cch--hhHh
Confidence            477899999999874   456889999998876665432   366999999999999999999999998  666  331 


Q ss_pred             ----------------------cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHH
Q 037504           92 ----------------------NRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEF  149 (396)
Q Consensus        92 ----------------------d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~  149 (396)
                                            -..|..||-+||..++.+|+++|+++|+|   ++.+|..|+|.||..+..-..++-.+
T Consensus       215 ~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd---~~aqDS~GNTVLH~lVi~~~~~My~~  291 (782)
T KOG3676|consen  215 CGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGAD---PNAQDSNGNTVLHMLVIHFVTEMYDL  291 (782)
T ss_pred             hccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCC---CCccccCCChHHHHHHHHHHHHHHHH
Confidence                                  12578999999999999999999999999   77889999999999999988888888


Q ss_pred             HHhhcc
Q 037504          150 LYRETK  155 (396)
Q Consensus       150 Ll~~~~  155 (396)
                      +++.++
T Consensus       292 ~L~~ga  297 (782)
T KOG3676|consen  292 ALELGA  297 (782)
T ss_pred             HHhcCC
Confidence            888876


No 74 
>cd00204 ANK ankyrin repeats;  ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.
Probab=99.70  E-value=4.4e-16  Score=122.12  Aligned_cols=93  Identities=33%  Similarity=0.465  Sum_probs=81.4

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP  134 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp  134 (396)
                      |..|.||||+|+..|+.+++++|++.+  ...  +.++..|.||||+|+..++.+++++|++.+++   ++..+..|.||
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~--~~~--~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~---~~~~~~~~~~~   76 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENG--ADV--NAKDNDGRTPLHLAAKNGHLEIVKLLLEKGAD---VNARDKDGNTP   76 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcC--CCC--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCH
Confidence            677999999999999999999999988  655  77888999999999999999999999999976   34445688999


Q ss_pred             HHHHHhcCCHHHHHHHHhhc
Q 037504          135 IVGAASLGHTEVVEFLYRET  154 (396)
Q Consensus       135 Lh~A~~~~~~~~v~~Ll~~~  154 (396)
                      +|+|+..++.+++++|++.+
T Consensus        77 l~~a~~~~~~~~~~~L~~~~   96 (126)
T cd00204          77 LHLAARNGNLDVVKLLLKHG   96 (126)
T ss_pred             HHHHHHcCcHHHHHHHHHcC
Confidence            99999999999999998765


No 75 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.68  E-value=2.3e-16  Score=109.68  Aligned_cols=103  Identities=22%  Similarity=0.286  Sum_probs=89.1

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA  104 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~  104 (396)
                      --+.+++.+|..+.|+..... |.++|..  ..|++|||+|+.+|+++++++|+..|  +++  +.+|.+|.|||--|+.
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~-g~nVn~~--~ggR~plhyAAD~GQl~ilefli~iG--A~i--~~kDKygITPLLsAvw   76 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNE-GLNVNEI--YGGRTPLHYAADYGQLSILEFLISIG--ANI--QDKDKYGITPLLSAVW   76 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHc-cccHHHH--hCCcccchHhhhcchHHHHHHHHHhc--ccc--CCccccCCcHHHHHHH
Confidence            346789999999999999876 7888876  58999999999999999999999999  888  9999999999999999


Q ss_pred             cCCHHHHHHHHhcCCCCccccCCCCCCCcHHHH
Q 037504          105 SGSVELVKATMEGNEDITMVPQDDKDRMLPIVG  137 (396)
Q Consensus       105 ~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~  137 (396)
                      .||.+||++|++.|++-. +...  +|.+.+..
T Consensus        77 EGH~~cVklLL~~GAdrt-~~~P--dG~~~~ea  106 (117)
T KOG4214|consen   77 EGHRDCVKLLLQNGADRT-IHAP--DGTALIEA  106 (117)
T ss_pred             HhhHHHHHHHHHcCcccc-eeCC--CchhHHhh
Confidence            999999999999999843 4444  67665543


No 76 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.60  E-value=9.1e-15  Score=127.37  Aligned_cols=128  Identities=26%  Similarity=0.321  Sum_probs=115.1

Q ss_pred             cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCC-----HHHHHHHHHHhhhc--ccchhcc
Q 037504           19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANR-----IDFVKKLVKKMKAE--NLDLAKR   91 (396)
Q Consensus        19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~-----~~~v~~Ll~~~~~~--~~d~~~~   91 (396)
                      .+..+.+++|.++..++.+.++.++.. +.+++.+ +..|.||||+|+..|+     .+++++|++.|  +  +. .+.+
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~-~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g--~~~~~-~~~~  143 (235)
T COG0666          69 RDLDGRLPLHSAASKGDDKIVKLLLAS-GADVNAK-DADGDTPLHLAALNGNPPEGNIEVAKLLLEAG--ADLDV-NNLR  143 (235)
T ss_pred             CCccccCHHHHHHHcCcHHHHHHHHHc-CCCcccc-cCCCCcHHHHHHhcCCcccchHHHHHHHHHcC--CCCCC-cccc
Confidence            455588999999999999999888875 8888777 9999999999999999     99999999998  5  22 3677


Q ss_pred             cCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhc
Q 037504           92 NRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRET  154 (396)
Q Consensus        92 d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~  154 (396)
                      |..|.||||+|+..|+.+++++|++.|++   +...+..|.|++++|+..++.++++.++..+
T Consensus       144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         144 DEDGNTPLHWAALNGDADIVELLLEAGAD---PNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCCCCchhHHHHHcCchHHHHHHHhcCCC---CcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            99999999999999999999999999999   5555779999999999999999999999865


No 77 
>KOG4214 consensus Myotrophin and similar proteins [Transcription]
Probab=99.59  E-value=8.3e-15  Score=101.97  Aligned_cols=99  Identities=23%  Similarity=0.324  Sum_probs=86.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504           60 TALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus        60 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      --+.+++++|..+-|+..+..|  .++  |..- .|++|||+|+-.|+++++++|+..|++   ++.+|+.|-|||..|+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g--~nV--n~~~-ggR~plhyAAD~GQl~ilefli~iGA~---i~~kDKygITPLLsAv   75 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEG--LNV--NEIY-GGRTPLHYAADYGQLSILEFLISIGAN---IQDKDKYGITPLLSAV   75 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHcc--ccH--HHHh-CCcccchHhhhcchHHHHHHHHHhccc---cCCccccCCcHHHHHH
Confidence            3467889999999999999887  555  6554 799999999999999999999999999   7888999999999999


Q ss_pred             hcCCHHHHHHHHhhcc-cCCCCcchhHH
Q 037504          140 SLGHTEVVEFLYRETK-NSLKDDDCIEL  166 (396)
Q Consensus       140 ~~~~~~~v~~Ll~~~~-~~~~~~~g~~~  166 (396)
                      ..||.++|++|++.|+ .....++|.+.
T Consensus        76 wEGH~~cVklLL~~GAdrt~~~PdG~~~  103 (117)
T KOG4214|consen   76 WEGHRDCVKLLLQNGADRTIHAPDGTAL  103 (117)
T ss_pred             HHhhHHHHHHHHHcCcccceeCCCchhH
Confidence            9999999999999999 66677787443


No 78 
>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]
Probab=99.55  E-value=1.3e-13  Score=120.12  Aligned_cols=95  Identities=28%  Similarity=0.348  Sum_probs=79.4

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCC-----HHHHHHHHhcCC--CCccccCC
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGS-----VELVKATMEGNE--DITMVPQD  127 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~-----~~~v~~Ll~~g~--~~~~~~~~  127 (396)
                      +..+.+++|.++..+..+++++++..+  .++  +.+|..|.||||+|+..++     .+++++|++.|+  +.  ...+
T Consensus        70 ~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~--~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~--~~~~  143 (235)
T COG0666          70 DLDGRLPLHSAASKGDDKIVKLLLASG--ADV--NAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDV--NNLR  143 (235)
T ss_pred             CccccCHHHHHHHcCcHHHHHHHHHcC--CCc--ccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCC--cccc
Confidence            566889999999999999888888887  665  8888999999999999988     899999999988  33  4455


Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504          128 DKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus       128 d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      |..|.||||+|+..|+.+++++|++.++
T Consensus       144 ~~~g~tpl~~A~~~~~~~~~~~ll~~~~  171 (235)
T COG0666         144 DEDGNTPLHWAALNGDADIVELLLEAGA  171 (235)
T ss_pred             CCCCCchhHHHHHcCchHHHHHHHhcCC
Confidence            7789999999999998888888887665


No 79 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.52  E-value=9.5e-15  Score=96.49  Aligned_cols=52  Identities=29%  Similarity=0.381  Sum_probs=33.9

Q ss_pred             CCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhh
Q 037504          230 YPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLA  285 (396)
Q Consensus       230 ~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A  285 (396)
                      .+.+++.+|..|+||||+|+++|+.+++++|++.|++    ++.+|+.|+||||+|
T Consensus         5 ~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d----~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    5 GPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD----PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT------TT---TTS--HHHH-
T ss_pred             CcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC----CCCCcCCCCCHHHhC
Confidence            4578999999999999999999999999999999999    899999999999997


No 80 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.51  E-value=3.5e-14  Score=93.30  Aligned_cols=54  Identities=33%  Similarity=0.546  Sum_probs=24.9

Q ss_pred             CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHH
Q 037504           58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATM  115 (396)
Q Consensus        58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll  115 (396)
                      |+||||+|++.|+.+++++|++.+  .++  +.+|.+|+||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~--~di--n~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHG--ADI--NAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTT--SGT--T-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            345555555555555555555544  333  555555555555555555555555543


No 81 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.50  E-value=5.7e-14  Score=127.46  Aligned_cols=120  Identities=24%  Similarity=0.254  Sum_probs=95.6

Q ss_pred             HHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHc
Q 037504           26 KLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAAS  105 (396)
Q Consensus        26 ~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~  105 (396)
                      .|.-|+..|.+++|+.++.+ -.|.... +..|-|+||-|+..||.+||++||+.|  +++  |..|.+|+||||+|+..
T Consensus       553 LLLDaaLeGEldlVq~~i~e-v~DpSqp-NdEGITaLHNAiCaghyeIVkFLi~~g--anV--Na~DSdGWTPLHCAASC  626 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYE-VTDPSQP-NDEGITALHNAICAGHYEIVKFLIEFG--ANV--NAADSDGWTPLHCAASC  626 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHh-hcCCCCC-CccchhHHhhhhhcchhHHHHHHHhcC--Ccc--cCccCCCCchhhhhhhc
Confidence            45568888999999988875 4555555 788999999999999999999999988  777  99999999999999999


Q ss_pred             CCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH--hcCCHHHHHHHHhh
Q 037504          106 GSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA--SLGHTEVVEFLYRE  153 (396)
Q Consensus       106 g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~--~~~~~~~v~~Ll~~  153 (396)
                      +++.+++.|++.|+.+....-.  ++.|+..-+-  ..|..++.+||...
T Consensus       627 Nnv~~ckqLVe~GaavfAsTlS--DmeTa~eKCee~eeGY~~CsqyL~~v  674 (752)
T KOG0515|consen  627 NNVPMCKQLVESGAAVFASTLS--DMETAAEKCEEMEEGYDQCSQYLYGV  674 (752)
T ss_pred             CchHHHHHHHhccceEEeeecc--cccchhhhcchhhhhHHHHHHHHHHH
Confidence            9999999999999886433333  6777776553  45778888888643


No 82 
>PF13637 Ank_4:  Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A ....
Probab=99.48  E-value=9.3e-14  Score=91.28  Aligned_cols=54  Identities=39%  Similarity=0.592  Sum_probs=45.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHH
Q 037504           95 GCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLY  151 (396)
Q Consensus        95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll  151 (396)
                      |+||||+|++.|+.+++++|+++|.+   ++.+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~d---in~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGAD---INAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSG---TT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            78999999999999999999999999   5555789999999999999999999986


No 83 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.47  E-value=1.9e-13  Score=136.35  Aligned_cols=106  Identities=21%  Similarity=0.235  Sum_probs=92.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA  104 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~  104 (396)
                      ..|+.|+..|+.+.++.|++. |++++.+ |..|.||||+|+..|+.+++++|++.|  +++  +.+|..|.||||+|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~-Gadin~~-d~~G~TpLh~Aa~~g~~eiv~~LL~~G--adv--n~~d~~G~TpLh~A~~  157 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTG-GADPNCR-DYDGRTPLHIACANGHVQVVRVLLEFG--ADP--TLLDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCcHHHHHHHCCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHHHHH
Confidence            468999999999999999975 8999988 999999999999999999999999998  777  9999999999999999


Q ss_pred             cCCHHHHHHHHhc-------CCCCccccCCCCCCCcHHHHHH
Q 037504          105 SGSVELVKATMEG-------NEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus       105 ~g~~~~v~~Ll~~-------g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      .|+.+++++|+++       |++.   +..+..|.+|+..+.
T Consensus       158 ~g~~~iv~~Ll~~~~~~~~~ga~~---~~~~~~g~~~~~~~~  196 (664)
T PTZ00322        158 NGFREVVQLLSRHSQCHFELGANA---KPDSFTGKPPSLEDS  196 (664)
T ss_pred             CCcHHHHHHHHhCCCcccccCCCC---CccccCCCCccchhh
Confidence            9999999999998       7663   334446666655443


No 84 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.47  E-value=4.5e-13  Score=113.05  Aligned_cols=124  Identities=19%  Similarity=0.216  Sum_probs=109.3

Q ss_pred             cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchh-cccCCCCcHHHH
Q 037504           23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLA-KRNRIGCTALFY  101 (396)
Q Consensus        23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~-~~d~~g~tpLh~  101 (396)
                      -.+||..++-.|+.+.+..||+. -..+|.. |..|+|||..|+..|+.++|+.||+.|  +++  | .++..+.||||+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~-vr~vn~~-D~sGMs~LahAaykGnl~~v~lll~~g--aDv--N~~qhg~~YTpLmF   85 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLST-VRQVNQR-DPSGMSVLAHAAYKGNLTLVELLLELG--ADV--NDKQHGTLYTPLMF   85 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHH-hhhhhcc-CCCcccHHHHHHhcCcHHHHHHHHHhC--CCc--CcccccccccHHHH
Confidence            36899999999999999999986 5567888 999999999999999999999999999  777  5 456778999999


Q ss_pred             HHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504          102 AAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus       102 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      |+.+|+.++.++|++.|+....++   .-|+|+-..|+.-|+.++|..+-.+-.
T Consensus        86 AALSGn~dvcrllldaGa~~~~vN---svgrTAaqmAAFVG~H~CV~iINN~~t  136 (396)
T KOG1710|consen   86 AALSGNQDVCRLLLDAGARMYLVN---SVGRTAAQMAAFVGHHECVAIINNHIT  136 (396)
T ss_pred             HHHcCCchHHHHHHhccCcccccc---chhhhHHHHHHHhcchHHHHHHhcccc
Confidence            999999999999999999965554   369999999999999999988755443


No 85 
>PF13857 Ank_5:  Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A.
Probab=99.45  E-value=6.6e-14  Score=92.45  Aligned_cols=47  Identities=30%  Similarity=0.434  Sum_probs=16.9

Q ss_pred             hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHH
Q 037504           89 AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGA  138 (396)
Q Consensus        89 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A  138 (396)
                      +.+|..|+||||+|+..|+.+++++|++.|++   ++.+|..|+||||+|
T Consensus        10 n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d---~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen   10 NAQDKYGNTPLHWAARYGHSEVVRLLLQNGAD---PNAKDKDGQTPLHYA   56 (56)
T ss_dssp             T---TTS--HHHHHHHHT-HHHHHHHHHCT-----TT---TTS--HHHH-
T ss_pred             cCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCC---CCCCcCCCCCHHHhC
Confidence            55555555555555555555555555555555   333344555555544


No 86 
>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
Probab=99.40  E-value=8.9e-13  Score=131.56  Aligned_cols=87  Identities=30%  Similarity=0.274  Sum_probs=81.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504           60 TALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus        60 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      +.|+.|+..|+.+.++.|++.|  +++  +.+|..|.||||+|+..|+.+++++|+++|++   ++.+|..|.||||+|+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~G--adi--n~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gad---vn~~d~~G~TpLh~A~  156 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGG--ADP--NCRDYDGRTPLHIACANGHVQVVRVLLEFGAD---PTLLDKDGKTPLELAE  156 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCC--CCC--CCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHH
Confidence            3588999999999999999988  776  99999999999999999999999999999999   5667889999999999


Q ss_pred             hcCCHHHHHHHHhh
Q 037504          140 SLGHTEVVEFLYRE  153 (396)
Q Consensus       140 ~~~~~~~v~~Ll~~  153 (396)
                      ..|+.+++++|+++
T Consensus       157 ~~g~~~iv~~Ll~~  170 (664)
T PTZ00322        157 ENGFREVVQLLSRH  170 (664)
T ss_pred             HCCcHHHHHHHHhC
Confidence            99999999999998


No 87 
>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]
Probab=99.36  E-value=1.6e-12  Score=118.14  Aligned_cols=104  Identities=25%  Similarity=0.233  Sum_probs=87.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHh
Q 037504           61 ALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAAS  140 (396)
Q Consensus        61 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~  140 (396)
                      .|.-|+..|.+++|+.++..-  .+.  ...|..|.|+||-|+..||.+||++||+.|++   ++..|.+||||||+|+.
T Consensus       553 LLLDaaLeGEldlVq~~i~ev--~Dp--SqpNdEGITaLHNAiCaghyeIVkFLi~~gan---VNa~DSdGWTPLHCAAS  625 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEV--TDP--SQPNDEGITALHNAICAGHYEIVKFLIEFGAN---VNAADSDGWTPLHCAAS  625 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhh--cCC--CCCCccchhHHhhhhhcchhHHHHHHHhcCCc---ccCccCCCCchhhhhhh
Confidence            345688999999999999876  454  77899999999999999999999999999999   77889999999999999


Q ss_pred             cCCHHHHHHHHhhcc-cCC-CCcchhHHHHHHh
Q 037504          141 LGHTEVVEFLYRETK-NSL-KDDDCIELLVKLI  171 (396)
Q Consensus       141 ~~~~~~v~~Ll~~~~-~~~-~~~~g~~~l~~~~  171 (396)
                      .++..+++.|++.|+ ... .-.++.|+...|-
T Consensus       626 CNnv~~ckqLVe~GaavfAsTlSDmeTa~eKCe  658 (752)
T KOG0515|consen  626 CNNVPMCKQLVESGAAVFASTLSDMETAAEKCE  658 (752)
T ss_pred             cCchHHHHHHHhccceEEeeecccccchhhhcc
Confidence            999999999999998 322 3345544444433


No 88 
>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]
Probab=99.36  E-value=1.5e-11  Score=104.07  Aligned_cols=112  Identities=21%  Similarity=0.220  Sum_probs=98.8

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHH
Q 037504           57 LGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIV  136 (396)
Q Consensus        57 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh  136 (396)
                      .-..||..++..|..+-...||+.-  .++  |.+|..|.|||..|+..|+.++|++|++.|+|++.  .++..+.||||
T Consensus        11 ~~~~~Lle~i~Kndt~~a~~LLs~v--r~v--n~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~--~qhg~~YTpLm   84 (396)
T KOG1710|consen   11 APKSPLLEAIDKNDTEAALALLSTV--RQV--NQRDPSGMSVLAHAAYKGNLTLVELLLELGADVND--KQHGTLYTPLM   84 (396)
T ss_pred             chhhHHHHHHccCcHHHHHHHHHHh--hhh--hccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCc--ccccccccHHH
Confidence            4578999999999999999999875  556  99999999999999999999999999999999753  45668999999


Q ss_pred             HHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcC
Q 037504          137 GAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKN  187 (396)
Q Consensus       137 ~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~  187 (396)
                      +|+..|+.++.++|++.|+ ....+.-|             +|+-.+|+..|
T Consensus        85 FAALSGn~dvcrllldaGa~~~~vNsvg-------------rTAaqmAAFVG  123 (396)
T KOG1710|consen   85 FAALSGNQDVCRLLLDAGARMYLVNSVG-------------RTAAQMAAFVG  123 (396)
T ss_pred             HHHHcCCchHHHHHHhccCccccccchh-------------hhHHHHHHHhc
Confidence            9999999999999999999 44555555             88999999988


No 89 
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.99  E-value=1.7e-09  Score=99.58  Aligned_cols=122  Identities=18%  Similarity=0.194  Sum_probs=104.5

Q ss_pred             HHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcC
Q 037504           27 LYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASG  106 (396)
Q Consensus        27 Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g  106 (396)
                      |..|+..+++--+++.... |.++..+ +.+-.|.||+|+..|+-++|+|||+++.+ .+ ++..|..|.|+||-|+..+
T Consensus       870 il~av~~~D~~klqE~h~~-gg~ll~~-~~~~~sllh~a~~tg~~eivkyildh~p~-el-ld~~de~get~lhkaa~~~  945 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLN-GGSLLIQ-GPDHCSLLHYAAKTGNGEIVKYILDHGPS-EL-LDMADETGETALHKAACQR  945 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhc-CCceEee-CcchhhHHHHHHhcCChHHHHHHHhcCCH-HH-HHHHhhhhhHHHHHHHHhc
Confidence            6778888887666666655 5555555 88899999999999999999999999933 33 5888999999999999999


Q ss_pred             CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504          107 SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus       107 ~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      +-.++++|++.|+.   +...|..|.||-..|-+.|+.+.+.||-++..
T Consensus       946 ~r~vc~~lvdagas---l~ktd~kg~tp~eraqqa~d~dlaayle~rq~  991 (1004)
T KOG0782|consen  946 NRAVCQLLVDAGAS---LRKTDSKGKTPQERAQQAGDPDLAAYLESRQN  991 (1004)
T ss_pred             chHHHHHHHhcchh---heecccCCCChHHHHHhcCCchHHHHHhhhhc
Confidence            99999999999999   66678899999999999999999999876543


No 90 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.98  E-value=5.3e-10  Score=100.82  Aligned_cols=92  Identities=27%  Similarity=0.254  Sum_probs=58.2

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504           21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF  100 (396)
Q Consensus        21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh  100 (396)
                      .++..++.+|+..|++..++.+.-+ +.|++.+ |.+.+|+||+|+..|+.+++++|++..   .+|++.+|..|+|||-
T Consensus       504 ~~~~i~~~~aa~~GD~~alrRf~l~-g~D~~~~-DyD~RTaLHvAAaEG~v~v~kfl~~~~---kv~~~~kDRw~rtPlD  578 (622)
T KOG0506|consen  504 NDTVINVMYAAKNGDLSALRRFALQ-GMDLETK-DYDDRTALHVAAAEGHVEVVKFLLNAC---KVDPDPKDRWGRTPLD  578 (622)
T ss_pred             ccchhhhhhhhhcCCHHHHHHHHHh-ccccccc-ccccchhheeecccCceeHHHHHHHHH---cCCCChhhccCCCcch
Confidence            3445566666666666666666654 6666666 666666666666666666666666663   4445666666666666


Q ss_pred             HHHHcCCHHHHHHHHhc
Q 037504          101 YAAASGSVELVKATMEG  117 (396)
Q Consensus       101 ~A~~~g~~~~v~~Ll~~  117 (396)
                      -|..-+|.+++++|-+.
T Consensus       579 dA~~F~h~~v~k~L~~~  595 (622)
T KOG0506|consen  579 DAKHFKHKEVVKLLEEA  595 (622)
T ss_pred             HhHhcCcHHHHHHHHHH
Confidence            66666666666666554


No 91 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.94  E-value=1.5e-10  Score=110.94  Aligned_cols=89  Identities=20%  Similarity=0.286  Sum_probs=81.8

Q ss_pred             HhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccC-CCCchhhhhhcCCCCCccccccchhHhHHH
Q 037504          228 FKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDK-DGNNILHLAGKLPPLNRLNIVSVAALQLQR  306 (396)
Q Consensus       228 ~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~-~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~  306 (396)
                      ..++..+|.+|..|+|+||+|+..+..+++++|+.+|+|    ++.+|+ .|+||||.|..+|+++++-+|         
T Consensus        39 k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGid----v~vqD~ESG~taLHRaiyyG~idca~lL---------  105 (1267)
T KOG0783|consen   39 KSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGID----VFVQDEESGYTALHRAIYYGNIDCASLL---------  105 (1267)
T ss_pred             HhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCce----eeeccccccchHhhHhhhhchHHHHHHH---------
Confidence            346677899999999999999999999999999999999    889997 599999999999999988777         


Q ss_pred             HHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504          307 ELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK  339 (396)
Q Consensus       307 ~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~  339 (396)
                                |.+|+.+.++|++|..||+...+
T Consensus       106 ----------L~~g~SL~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  106 ----------LSKGRSLRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             ----------HhcCCceEEecccCCCHHHHHhh
Confidence                      77999999999999999998776


No 92 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.86  E-value=3.1e-09  Score=59.74  Aligned_cols=28  Identities=39%  Similarity=0.582  Sum_probs=21.6

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 037504           94 IGCTALFYAAASGSVELVKATMEGNEDI  121 (396)
Q Consensus        94 ~g~tpLh~A~~~g~~~~v~~Ll~~g~~~  121 (396)
                      +|+||||+|++.|+.+++++|+++|+++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadv   28 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADV   28 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCC
Confidence            4778888888888888888888877774


No 93 
>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]
Probab=98.85  E-value=2.3e-09  Score=102.96  Aligned_cols=99  Identities=20%  Similarity=0.280  Sum_probs=68.7

Q ss_pred             CCHHHHHHHHHhCcccc-ccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccC-CCCcHHHHHHHcCCHHHH
Q 037504           34 GDWARAKVIYDEHKDEI-GDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNR-IGCTALFYAAASGSVELV  111 (396)
Q Consensus        34 g~~~~v~~ll~~~~~~~-~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~-~g~tpLh~A~~~g~~~~v  111 (396)
                      +....++-++++...+. |.+ |..|+|+||+|+..|..+++++||++|  .++  +.+|. .|.||||-|+..|+++++
T Consensus        28 s~~Nqlk~F~~k~c~n~anik-D~~GR~alH~~~S~~k~~~l~wLlqhG--idv--~vqD~ESG~taLHRaiyyG~idca  102 (1267)
T KOG0783|consen   28 SEPNQLKGFSEKSCQNLANIK-DRYGRTALHIAVSENKNSFLRWLLQHG--IDV--FVQDEESGYTALHRAIYYGNIDCA  102 (1267)
T ss_pred             CChhHHHHHHHHhhhhhhhHH-HhhccceeeeeeccchhHHHHHHHhcC--cee--eeccccccchHhhHhhhhchHHHH
Confidence            33334555665544443 334 777888888888888888888888877  554  77764 477888888888888888


Q ss_pred             HHHHhcCCCCccccCCCCCCCcHHHHHHh
Q 037504          112 KATMEGNEDITMVPQDDKDRMLPIVGAAS  140 (396)
Q Consensus       112 ~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~  140 (396)
                      -+|+.+|+.   +..+|++|.+||..-++
T Consensus       103 ~lLL~~g~S---L~i~Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  103 SLLLSKGRS---LRIKDKEGLSPLQFLSR  128 (1267)
T ss_pred             HHHHhcCCc---eEEecccCCCHHHHHhh
Confidence            888888776   45556678888777665


No 94 
>PF13606 Ank_3:  Ankyrin repeat
Probab=98.84  E-value=3.4e-09  Score=59.53  Aligned_cols=27  Identities=41%  Similarity=0.569  Sum_probs=26.1

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhhccc
Q 037504          240 NGHTIFHIAVSNRMREIFKFIFEISSV  266 (396)
Q Consensus       240 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  266 (396)
                      +|+||||+||++|+.+++++|+++|+|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gad   27 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGAD   27 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCC
Confidence            589999999999999999999999998


No 95 
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.81  E-value=5.8e-09  Score=60.45  Aligned_cols=33  Identities=21%  Similarity=0.444  Sum_probs=30.4

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhhccccccccccccC
Q 037504          240 NGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDK  276 (396)
Q Consensus       240 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~  276 (396)
                      +|+||||+|+++|+.+++++|+++|++    ++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~----~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGAD----INARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSC----TTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCC----CCCCCC
Confidence            589999999999999999999999999    777764


No 96 
>PF13962 PGG:  Domain of unknown function
Probab=98.81  E-value=3.7e-09  Score=80.71  Aligned_cols=45  Identities=47%  Similarity=0.775  Sum_probs=39.5

Q ss_pred             hHHHhhhhchhHHHHHHHHHHHHHhhhcCCCCcCCC---CCcccc-cCC
Q 037504          349 ETWVKDNASSCMIVATLITTVVFGAAITVPGGYKEG---IGRLCL-TLP  393 (396)
Q Consensus       349 ~~~~~~~~~~~~~~~~liatv~f~a~~~~pgg~~~~---~g~~~l-~~~  393 (396)
                      ++|+++.+++.+++++||||++|+++++||||+.++   .|.|++ ..|
T Consensus         1 ~~~~~~~~~~llVvAtLIATvtF~A~~tpPGG~~~~~~~~G~~il~~~~   49 (113)
T PF13962_consen    1 KKWLEDTRNSLLVVATLIATVTFQAAFTPPGGYWQDDDDAGTPILAKKP   49 (113)
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccCCCCchhcccc
Confidence            368999999999999999999999999999999664   688888 344


No 97 
>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]
Probab=98.73  E-value=1.2e-08  Score=92.23  Aligned_cols=95  Identities=23%  Similarity=0.220  Sum_probs=83.5

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504           55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP  134 (396)
Q Consensus        55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp  134 (396)
                      +.++..++.+|++.|.+..++.+.-.|  .++  +.+|.+.+|+||+|+..|+++++++|++.... + .+.+|.+|+||
T Consensus       503 ~~~~~i~~~~aa~~GD~~alrRf~l~g--~D~--~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv-~-~~~kDRw~rtP  576 (622)
T KOG0506|consen  503 ENDTVINVMYAAKNGDLSALRRFALQG--MDL--ETKDYDDRTALHVAAAEGHVEVVKFLLNACKV-D-PDPKDRWGRTP  576 (622)
T ss_pred             cccchhhhhhhhhcCCHHHHHHHHHhc--ccc--cccccccchhheeecccCceeHHHHHHHHHcC-C-CChhhccCCCc
Confidence            456778999999999999999988887  676  99999999999999999999999999987432 1 66778899999


Q ss_pred             HHHHHhcCCHHHHHHHHhhcc
Q 037504          135 IVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus       135 Lh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      |.-|...++.+++++|-+...
T Consensus       577 lDdA~~F~h~~v~k~L~~~~~  597 (622)
T KOG0506|consen  577 LDDAKHFKHKEVVKLLEEAQY  597 (622)
T ss_pred             chHhHhcCcHHHHHHHHHHhc
Confidence            999999999999999987654


No 98 
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.72  E-value=3.5e-08  Score=90.85  Aligned_cols=86  Identities=16%  Similarity=0.195  Sum_probs=40.0

Q ss_pred             HHHHHHcCCHHHHHHHHHh-CccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHc
Q 037504           27 LYRVALNGDWARAKVIYDE-HKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAAS  105 (396)
Q Consensus        27 Lh~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~  105 (396)
                      ||+++...+.+.....+.. ....++.. |..|.||||+|+..|+.+.++.|+..+  +++  ..+|..|++|||.|+..
T Consensus        24 lh~~~~~~~~~sl~~el~~~~~~~id~~-D~~g~TpLhlAV~Lg~~~~a~~Ll~a~--Adv--~~kN~~gWs~L~EAv~~   98 (560)
T KOG0522|consen   24 LHWAVVTTDSDSLEQELLAKVSLVIDRR-DPPGRTPLHLAVRLGHVEAARILLSAG--ADV--SIKNNEGWSPLHEAVST   98 (560)
T ss_pred             cchhhhccchhhHHHHHhhhhhceeccc-cCCCCccHHHHHHhcCHHHHHHHHhcC--CCc--cccccccccHHHHHHHc
Confidence            5555555444444332221 12233333 444555555555555555555555544  333  44555555555555555


Q ss_pred             CCHHHHHHHHhc
Q 037504          106 GSVELVKATMEG  117 (396)
Q Consensus       106 g~~~~v~~Ll~~  117 (396)
                      |+.+++..++.+
T Consensus        99 g~~q~i~~vlr~  110 (560)
T KOG0522|consen   99 GNEQIITEVLRH  110 (560)
T ss_pred             CCHHHHHHHHHH
Confidence            555544444443


No 99 
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.72  E-value=4e-08  Score=89.34  Aligned_cols=85  Identities=22%  Similarity=0.215  Sum_probs=52.2

Q ss_pred             HHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHc
Q 037504           26 KLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAAS  105 (396)
Q Consensus        26 ~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~  105 (396)
                      .||-.++.|+.+....||.. |+++|...-..|.||||.|++.|+..-+++|+-.|  +++  +..|..|+||+-+|-..
T Consensus       136 QLhasvRt~nlet~LRll~l-GA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYG--AD~--~a~d~~GmtP~~~AR~~  210 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSL-GAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYG--ADP--GAQDSSGMTPVDYARQG  210 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHc-ccccCCCCcccCCchhHHHHhccchhhhhHHhhcc--CCC--CCCCCCCCcHHHHHHhc
Confidence            46666666666666666654 66666554455666666666666666666666666  555  66666666666666666


Q ss_pred             CCHHHHHHHH
Q 037504          106 GSVELVKATM  115 (396)
Q Consensus       106 g~~~~v~~Ll  115 (396)
                      ||.++.+.|+
T Consensus       211 gH~~laeRl~  220 (669)
T KOG0818|consen  211 GHHELAERLV  220 (669)
T ss_pred             CchHHHHHHH
Confidence            6665555444


No 100
>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]
Probab=98.69  E-value=7.2e-08  Score=87.75  Aligned_cols=87  Identities=22%  Similarity=0.196  Sum_probs=77.8

Q ss_pred             HHHHHHHcCCHHHHHHHHHHhhhcccchhccc-CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504           61 ALHVAAAANRIDFVKKLVKKMKAENLDLAKRN-RIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus        61 ~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d-~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      -||-.++.|+.++.-.||..|  +++  |..+ ..|.||||+|++.|+.-=+++|.-+|+|   +...|.+|+||+.+|-
T Consensus       136 QLhasvRt~nlet~LRll~lG--A~~--N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD---~~a~d~~GmtP~~~AR  208 (669)
T KOG0818|consen  136 QLHSSVRTGNLETCLRLLSLG--AQA--NFFHPEKGNTPLHVAAKAGQILQAELLAVYGAD---PGAQDSSGMTPVDYAR  208 (669)
T ss_pred             HHHHHhhcccHHHHHHHHHcc--ccc--CCCCcccCCchhHHHHhccchhhhhHHhhccCC---CCCCCCCCCcHHHHHH
Confidence            489999999999999999999  666  6554 4699999999999999999999999999   6777889999999999


Q ss_pred             hcCCHHHHHHHHhhc
Q 037504          140 SLGHTEVVEFLYRET  154 (396)
Q Consensus       140 ~~~~~~~v~~Ll~~~  154 (396)
                      ..||.++.+-|++..
T Consensus       209 ~~gH~~laeRl~e~~  223 (669)
T KOG0818|consen  209 QGGHHELAERLVEIQ  223 (669)
T ss_pred             hcCchHHHHHHHHHH
Confidence            999999998887754


No 101
>PF00023 Ank:  Ankyrin repeat Hereditary spherocytosis;  InterPro: IPR002110  The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....
Probab=98.69  E-value=2.5e-08  Score=57.74  Aligned_cols=28  Identities=39%  Similarity=0.546  Sum_probs=18.9

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhcCCCC
Q 037504           94 IGCTALFYAAASGSVELVKATMEGNEDI  121 (396)
Q Consensus        94 ~g~tpLh~A~~~g~~~~v~~Ll~~g~~~  121 (396)
                      +|+||||+|+..|+.+++++|+++|+++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~   28 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADI   28 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCC
Confidence            3666777777777777777777766663


No 102
>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]
Probab=98.66  E-value=4.2e-08  Score=90.62  Aligned_cols=99  Identities=24%  Similarity=0.175  Sum_probs=88.0

Q ss_pred             CCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCC
Q 037504           15 PPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRI   94 (396)
Q Consensus        15 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~   94 (396)
                      .-..++.+.+|.||+|+..|+-++|+++|+..+..+....|..|.|+||.|+..++-.++++|++.|  +.+  ...|..
T Consensus       891 ~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdag--asl--~ktd~k  966 (1004)
T KOG0782|consen  891 SLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAG--ASL--RKTDSK  966 (1004)
T ss_pred             ceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcc--hhh--eecccC
Confidence            3344677789999999999999999999998776665555899999999999999999999999998  777  899999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhc
Q 037504           95 GCTALFYAAASGSVELVKATMEG  117 (396)
Q Consensus        95 g~tpLh~A~~~g~~~~v~~Ll~~  117 (396)
                      |.||-.-|-+.|..+...||-.+
T Consensus       967 g~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  967 GKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             CCChHHHHHhcCCchHHHHHhhh
Confidence            99999999999999999999754


No 103
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.63  E-value=7.3e-08  Score=89.30  Aligned_cols=91  Identities=24%  Similarity=0.181  Sum_probs=77.6

Q ss_pred             HHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc
Q 037504           62 LHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL  141 (396)
Q Consensus        62 Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~  141 (396)
                      |.-|+....+..+-+||.+|....++-...+.+|+|+||+||+.|++.+.++|+=+|+|   +..+|..|.|+|.||-+.
T Consensus       628 Ll~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~d---v~~rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  628 LLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVD---VMARDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcc---ceecccCCchhhhhHhhc
Confidence            45677777788888899988555553345677889999999999999999999999999   667788999999999999


Q ss_pred             CCHHHHHHHHhhcc
Q 037504          142 GHTEVVEFLYRETK  155 (396)
Q Consensus       142 ~~~~~v~~Ll~~~~  155 (396)
                      |..+++.+|+.+|.
T Consensus       705 ~sqec~d~llq~gc  718 (749)
T KOG0705|consen  705 GSQECIDVLLQYGC  718 (749)
T ss_pred             ccHHHHHHHHHcCC
Confidence            99999999999998


No 104
>KOG0522 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.53  E-value=2.2e-07  Score=85.72  Aligned_cols=91  Identities=22%  Similarity=0.301  Sum_probs=74.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504           60 TALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus        60 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      -|||.++.....+-....+.......  ++.+|..|+||||+|+..|+.+.++.|+..|++   +..+++.||+|||.|+
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~--id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Ad---v~~kN~~gWs~L~EAv   96 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLV--IDRRDPPGRTPLHLAVRLGHVEAARILLSAGAD---VSIKNNEGWSPLHEAV   96 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhce--eccccCCCCccHHHHHHhcCHHHHHHHHhcCCC---ccccccccccHHHHHH
Confidence            45999998888776655444332234  489999999999999999999999999999999   5667779999999999


Q ss_pred             hcCCHHHHHHHHhhcc
Q 037504          140 SLGHTEVVEFLYRETK  155 (396)
Q Consensus       140 ~~~~~~~v~~Ll~~~~  155 (396)
                      ..|+.+++..++.+..
T Consensus        97 ~~g~~q~i~~vlr~~~  112 (560)
T KOG0522|consen   97 STGNEQIITEVLRHLK  112 (560)
T ss_pred             HcCCHHHHHHHHHHhH
Confidence            9999988887776654


No 105
>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]
Probab=98.50  E-value=3.1e-07  Score=85.26  Aligned_cols=91  Identities=25%  Similarity=0.272  Sum_probs=76.4

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccc---cccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDE---IGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY  101 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~---~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~  101 (396)
                      .-|.-|+...++..+..||.. |..   .+...+.+|+|+||+||+.|++.+.++|+=.|  .++  ..+|..|+|+|.|
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAh-g~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg--~dv--~~rda~g~t~l~y  700 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAH-GSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYG--VDV--MARDAHGRTALFY  700 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhc-cCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhC--ccc--eecccCCchhhhh
Confidence            456778888888888888864 432   23344677899999999999999999999877  655  9999999999999


Q ss_pred             HHHcCCHHHHHHHHhcCCC
Q 037504          102 AAASGSVELVKATMEGNED  120 (396)
Q Consensus       102 A~~~g~~~~v~~Ll~~g~~  120 (396)
                      |-+.|..+|+..|+++|..
T Consensus       701 ar~a~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  701 ARQAGSQECIDVLLQYGCP  719 (749)
T ss_pred             HhhcccHHHHHHHHHcCCC
Confidence            9999999999999999975


No 106
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.38  E-value=1.2e-06  Score=85.50  Aligned_cols=136  Identities=17%  Similarity=0.166  Sum_probs=103.8

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHH
Q 037504           56 RLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPI  135 (396)
Q Consensus        56 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpL  135 (396)
                      ..+.--.-.|+..|+...|+..++......+++|.+|.-|+++|+.|..+.+.+++++|++++..   .       ..+|
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~---~-------gdAL   92 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSE---E-------GDAL   92 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCccc---c-------chHH
Confidence            34455567899999999999999886334466699999999999999999999999999998765   2       3479


Q ss_pred             HHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504          136 VGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERA  215 (396)
Q Consensus       136 h~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  215 (396)
                      .+|+..|..+.|++++.+.....                    -++.+                                
T Consensus        93 L~aI~~~~v~~VE~ll~~~~~~~--------------------~~~~~--------------------------------  120 (822)
T KOG3609|consen   93 LLAIAVGSVPLVELLLVHFVDAP--------------------YLERS--------------------------------  120 (822)
T ss_pred             HHHHHHHHHHHHHHHHhcccccc--------------------hhccc--------------------------------
Confidence            99999999999999998765110                    00000                                


Q ss_pred             HHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccc
Q 037504          216 LELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVAD  268 (396)
Q Consensus       216 ~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~  268 (396)
                                     .+.-...-.-+-|||.+||..++.|++++|+++|+...
T Consensus       121 ---------------~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen  121 ---------------GDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             ---------------cccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence                           00001112346899999999999999999999999843


No 107
>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=98.28  E-value=3.4e-06  Score=82.44  Aligned_cols=123  Identities=22%  Similarity=0.219  Sum_probs=99.0

Q ss_pred             cccchHHHHHHHcCCHHHHHHHHHhCc---cccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504           21 RTRRLKLYRVALNGDWARAKVIYDEHK---DEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT   97 (396)
Q Consensus        21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~---~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t   97 (396)
                      ..+.-....|+..|+...|+..++...   .++|.. |.-|+++|++|+.+.+.|++++|+++.    +  ..     ..
T Consensus        23 ~~~e~~fL~a~E~gd~~~V~k~l~~~~~~~lninc~-d~lGr~al~iai~nenle~~eLLl~~~----~--~~-----gd   90 (822)
T KOG3609|consen   23 NEGEKGFLLAHENGDVPLVAKALEYKAVSKLNINCR-DPLGRLALHIAIDNENLELQELLLDTS----S--EE-----GD   90 (822)
T ss_pred             chhhHHHHHHHHcCChHHHHHHHHhccccccchhcc-ChHhhhceecccccccHHHHHHHhcCc----c--cc-----ch
Confidence            344556779999999999999998644   366777 999999999999999999999999974    2  22     35


Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCcc-------ccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           98 ALFYAAASGSVELVKATMEGNEDITM-------VPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        98 pLh~A~~~g~~~~v~~Ll~~g~~~~~-------~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      +|-+|++.|..++|+.++.+-.....       -...-..+.|||.+|+..++.|++++|+.+|+
T Consensus        91 ALL~aI~~~~v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~  155 (822)
T KOG3609|consen   91 ALLLAIAVGSVPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGH  155 (822)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCC
Confidence            89999999999999999987544210       00111247799999999999999999999998


No 108
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.18  E-value=3.8e-06  Score=74.38  Aligned_cols=55  Identities=22%  Similarity=0.297  Sum_probs=34.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHh
Q 037504           25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKM   81 (396)
Q Consensus        25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~   81 (396)
                      --|++||+.|+.+.|+.|++. |.++|.. |....+||.+|+..||.++|++|++.|
T Consensus        38 ~elceacR~GD~d~v~~LVet-gvnVN~v-D~fD~spL~lAsLcGHe~vvklLLenG   92 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVET-GVNVNAV-DRFDSSPLYLASLCGHEDVVKLLLENG   92 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHh-CCCcchh-hcccccHHHHHHHcCcHHHHHHHHHcC
Confidence            345666666666666666663 6666666 666666666666666666666666666


No 109
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.18  E-value=1.6e-06  Score=86.43  Aligned_cols=130  Identities=19%  Similarity=0.106  Sum_probs=99.0

Q ss_pred             cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504           19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA   98 (396)
Q Consensus        19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp   98 (396)
                      ..-.|.+.+|+++..++.-.+..+++..+...... |.+|.-.+|+ |..++.+.+-+++... ...+  +.+|..|+||
T Consensus       570 ~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~el-d~d~qgV~hf-ca~lg~ewA~ll~~~~-~~ai--~i~D~~G~tp  644 (975)
T KOG0520|consen  570 VNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLEL-DRDGQGVIHF-CAALGYEWAFLPISAD-GVAI--DIRDRNGWTP  644 (975)
T ss_pred             CCCcchHHHHHHHHHhHHHHHHHHhcccccCchhh-cccCCChhhH-hhhcCCceeEEEEeec-cccc--ccccCCCCcc
Confidence            45678999999999999999999998533333333 7778888888 5555666555555431 1444  9999999999


Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccc---cCCCCCCCcHHHHHHhcCCHHHHHHHHhh
Q 037504           99 LFYAAASGSVELVKATMEGNEDITMV---PQDDKDRMLPIVGAASLGHTEVVEFLYRE  153 (396)
Q Consensus        99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~---~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~  153 (396)
                      ||||+..|+..++..|++.|++...+   ...+..|.|+-.+|..+|+..+.-+|-+.
T Consensus       645 L~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  645 LHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             cchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            99999999999999999888764332   22334689999999999999988888665


No 110
>KOG0511 consensus Ankyrin repeat protein [General function prediction only]
Probab=98.15  E-value=5.7e-06  Score=73.31  Aligned_cols=86  Identities=22%  Similarity=0.184  Sum_probs=66.2

Q ss_pred             chHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC-CCCcHHHH
Q 037504           59 DTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDK-DRMLPIVG  137 (396)
Q Consensus        59 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-~g~tpLh~  137 (396)
                      .--|.+||+.|..+.|++|++.|  .++  |.+|....+||.+|+..||.++|++|+++|+-    ..+|. .|..++. 
T Consensus        37 f~elceacR~GD~d~v~~LVetg--vnV--N~vD~fD~spL~lAsLcGHe~vvklLLenGAi----C~rdtf~G~RC~Y-  107 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETG--VNV--NAVDRFDSSPLYLASLCGHEDVVKLLLENGAI----CSRDTFDGDRCHY-  107 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhC--CCc--chhhcccccHHHHHHHcCcHHHHHHHHHcCCc----ccccccCcchhhh-
Confidence            55689999999999999999988  776  99999999999999999999999999999985    23332 4555544 


Q ss_pred             HHhcCCHHHHHHHHhhcc
Q 037504          138 AASLGHTEVVEFLYRETK  155 (396)
Q Consensus       138 A~~~~~~~~v~~Ll~~~~  155 (396)
                      ++.+.+  +=+.|++..-
T Consensus       108 gaLnd~--IR~mllsydi  123 (516)
T KOG0511|consen  108 GALNDR--IRRMLLSYDI  123 (516)
T ss_pred             hhhhHH--HHHHHHHHHH
Confidence            433332  3345665543


No 111
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=98.09  E-value=7.5e-06  Score=65.77  Aligned_cols=65  Identities=26%  Similarity=0.269  Sum_probs=50.4

Q ss_pred             hhcccCCCCcHHHHHHHcCCHHHHHHHHhcC-CCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504           88 LAKRNRIGCTALFYAAASGSVELVKATMEGN-EDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus        88 ~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      +|.+|..|+|||+.|+..|+.+.+.+|+++| +.   +...|..|.+++.+|-+.|..+++..|.+...
T Consensus         5 in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~---vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~   70 (223)
T KOG2384|consen    5 INARDAFGWTALMCAAMEGSNEAVSYLLGRGVAF---VGVTDESSLDAAQLAEKGGAQAFVHSLFENDR   70 (223)
T ss_pred             ccchhhhcchHHHHHhhhcchhHHHHHhccCccc---ccccccccchHHHHHHhcChHHHHHHHHHHhc
Confidence            4788888888888888888888888888888 44   55556688888888888888888888877654


No 112
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]
Probab=98.07  E-value=2.8e-06  Score=84.86  Aligned_cols=132  Identities=19%  Similarity=0.065  Sum_probs=98.2

Q ss_pred             CCCCCcHHHHHHhcCCHHHHHHHHhh-cc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhc
Q 037504          128 DKDRMLPIVGAASLGHTEVVEFLYRE-TK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNL  205 (396)
Q Consensus       128 d~~g~tpLh~A~~~~~~~~v~~Ll~~-~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~  205 (396)
                      ...|+|-+|+++..++.-.++.+++. +. ...-+.+|             .-.+|+++..|..                
T Consensus       571 ~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~-------------qgV~hfca~lg~e----------------  621 (975)
T KOG0520|consen  571 NFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDG-------------QGVIHFCAALGYE----------------  621 (975)
T ss_pred             CCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccC-------------CChhhHhhhcCCc----------------
Confidence            34789999999999999999988886 44 33344555             5566666665522                


Q ss_pred             cchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccc--cccCCCCchhh
Q 037504          206 GAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFD--SKDKDGNNILH  283 (396)
Q Consensus       206 ~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n--~~d~~g~TpLh  283 (396)
                                  ....++    ...+..++.+|..|+||||||+.+|+..++..|++.|++...+.+  ..+-.|.|+-.
T Consensus       622 ------------wA~ll~----~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~  685 (975)
T KOG0520|consen  622 ------------WAFLPI----SADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAAD  685 (975)
T ss_pred             ------------eeEEEE----eecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhh
Confidence                        111111    235677999999999999999999999999999999888654333  33456999999


Q ss_pred             hhhcCCCCCccccccchhHhH
Q 037504          284 LAGKLPPLNRLNIVSVAALQL  304 (396)
Q Consensus       284 ~A~~~~~~~~~~~l~~~~~~~  304 (396)
                      +|...|+..+..+|++.++..
T Consensus       686 la~s~g~~gia~~lse~~L~~  706 (975)
T KOG0520|consen  686 LARANGHKGIAGYLSEKALSA  706 (975)
T ss_pred             hhhcccccchHHHHhhhHHHH
Confidence            999999999988887765443


No 113
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.07  E-value=2.6e-06  Score=85.44  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=73.2

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhc
Q 037504          239 ENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVV  318 (396)
Q Consensus       239 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~  318 (396)
                      ..|.|+||.|+..+...++++|++.|++    +|.+|..|+||||.+...|+...+..+                   +.
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~----vn~~d~~g~~plh~~~~~g~~~~~~~l-------------------l~  710 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGAD----VNALDSKGRTPLHHATASGHTSIACLL-------------------LK  710 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCc----chhhhccCCCcchhhhhhcccchhhhh-------------------cc
Confidence            4689999999999999999999999999    899999999999999999998888776                   67


Q ss_pred             chhhhhhhcCCCCCchhhHHHH
Q 037504          319 PRKFAEEKNNDGLTPGDLFIKE  340 (396)
Q Consensus       319 ~~~~~~~~~~~g~tpl~~a~~~  340 (396)
                      .+++.+..+.+|++|+++|.+.
T Consensus       711 ~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  711 RGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             ccccccccCccCcchhhHHhhh
Confidence            8999999999999999998643


No 114
>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]
Probab=98.07  E-value=3.9e-06  Score=84.15  Aligned_cols=89  Identities=25%  Similarity=0.278  Sum_probs=77.2

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHH
Q 037504           56 RLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPI  135 (396)
Q Consensus        56 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpL  135 (396)
                      ..|.|+||.|+..|..-+++.|++.|  +++  |.+|..|+||||.+...|+...+..|+++|++   ....+..|.+||
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~g--a~v--n~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~---~~a~~~~~~~~l  726 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNG--ADV--NALDSKGRTPLHHATASGHTSIACLLLKRGAD---PNAFDPDGKLPL  726 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcC--Ccc--hhhhccCCCcchhhhhhcccchhhhhcccccc---ccccCccCcchh
Confidence            45799999999999999999999999  777  99999999999999999999999999999999   455566899999


Q ss_pred             HHHHhcCCHHHHHHHH
Q 037504          136 VGAASLGHTEVVEFLY  151 (396)
Q Consensus       136 h~A~~~~~~~~v~~Ll  151 (396)
                      ++|....+.+++-++.
T Consensus       727 ~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  727 DIAMEAANADIVLLLR  742 (785)
T ss_pred             hHHhhhccccHHHHHh
Confidence            9998776666555443


No 115
>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]
Probab=97.92  E-value=1.9e-05  Score=63.49  Aligned_cols=70  Identities=20%  Similarity=0.206  Sum_probs=60.7

Q ss_pred             ccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCC
Q 037504           47 KDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNED  120 (396)
Q Consensus        47 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~  120 (396)
                      +.++|.+ |..|+|||+.|+..|+.+.|.+|+..| .+.  +...|..|.+++.+|-+.|..+.++.|-+.-.+
T Consensus         2 e~~in~r-D~fgWTalmcaa~eg~~eavsyllgrg-~a~--vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~e   71 (223)
T KOG2384|consen    2 EGNINAR-DAFGWTALMCAAMEGSNEAVSYLLGRG-VAF--VGVTDESSLDAAQLAEKGGAQAFVHSLFENDRE   71 (223)
T ss_pred             CCCccch-hhhcchHHHHHhhhcchhHHHHHhccC-ccc--ccccccccchHHHHHHhcChHHHHHHHHHHhcc
Confidence            3567888 999999999999999999999999997 223  488999999999999999999999999887544


No 116
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=97.07  E-value=0.001  Score=36.10  Aligned_cols=26  Identities=38%  Similarity=0.579  Sum_probs=17.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhcCCC
Q 037504           95 GCTALFYAAASGSVELVKATMEGNED  120 (396)
Q Consensus        95 g~tpLh~A~~~g~~~~v~~Ll~~g~~  120 (396)
                      |.||+|+|+..++.++++.|++++.+
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            55666666666666666666666654


No 117
>smart00248 ANK ankyrin repeats. Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.
Probab=96.82  E-value=0.0019  Score=34.96  Aligned_cols=27  Identities=26%  Similarity=0.460  Sum_probs=24.9

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhhccc
Q 037504          240 NGHTIFHIAVSNRMREIFKFIFEISSV  266 (396)
Q Consensus       240 ~g~t~Lh~A~~~~~~~~v~~Ll~~g~~  266 (396)
                      .|.||+|+|+..++.+++++|++.|.+
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~   27 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGAD   27 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            478999999999999999999998876


No 118
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.17  E-value=0.0053  Score=57.03  Aligned_cols=66  Identities=27%  Similarity=0.309  Sum_probs=50.4

Q ss_pred             HHHHHHHHHHhhhcccch--hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504           71 IDFVKKLVKKMKAENLDL--AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA  139 (396)
Q Consensus        71 ~~~v~~Ll~~~~~~~~d~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~  139 (396)
                      ...+++|.+.+..-+.++  ...+..-.|+||+|+..|.-++|.+||+.|+|   ...+|..|.||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~D---p~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCD---PSTKDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCC---chhcccCCCCcccccc
Confidence            556777777662222222  33455567999999999999999999999988   5567779999999887


No 119
>KOG2505 consensus Ankyrin repeat protein [General function prediction only]
Probab=96.00  E-value=0.0054  Score=56.97  Aligned_cols=44  Identities=23%  Similarity=0.274  Sum_probs=40.5

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhh
Q 037504          239 ENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAG  286 (396)
Q Consensus       239 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~  286 (396)
                      .--.|+||+|+..|..++|.+||+.|+|    +..+|..|.||..++.
T Consensus       428 ~ltsT~LH~aa~qg~~k~v~~~Leeg~D----p~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  428 YLTSTFLHYAAAQGARKCVKYFLEEGCD----PSTKDGAGRTPYSLSA  471 (591)
T ss_pred             cccchHHHHHHhcchHHHHHHHHHhcCC----chhcccCCCCcccccc
Confidence            3457999999999999999999999999    7789999999999987


No 120
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.96  E-value=0.047  Score=45.75  Aligned_cols=118  Identities=14%  Similarity=0.175  Sum_probs=83.8

Q ss_pred             chHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCC----CCcHH
Q 037504           24 RLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRI----GCTAL   99 (396)
Q Consensus        24 ~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~----g~tpL   99 (396)
                      .-.|--|+..-+.+.+..++..         -..-.++|-+|...+..+++.+|+.+-   ++  ..+|.-    +.--+
T Consensus       154 ~isledAV~AsN~~~i~~~Vtd---------KkdA~~Am~~si~~~K~dva~~lls~f---~f--t~~dv~~~~~~~ydi  219 (284)
T PF06128_consen  154 DISLEDAVKASNYEEISNLVTD---------KKDAHQAMWLSIGNAKEDVALYLLSKF---NF--TKQDVASMEKELYDI  219 (284)
T ss_pred             cccHHHHHhhcCHHHHHHHhcc---------hHHHHHHHHHHhcccHHHHHHHHHhhc---ce--ecchhhhcCcchhhH
Confidence            3456678887777777666643         123468899999999999999999874   32  333322    22234


Q ss_pred             HHHHH--cCCHHHHHHHHhcCC-CCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504          100 FYAAA--SGSVELVKATMEGNE-DITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK  155 (396)
Q Consensus       100 h~A~~--~g~~~~v~~Ll~~g~-~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~  155 (396)
                      -++..  ..+..++++.+++|- +++..-.+-++|.|-|.-|.++++.+++.+|+++|+
T Consensus       220 eY~LS~h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  220 EYLLSEHSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             HHHHhhcCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence            44443  347789999999984 433333344589999999999999999999999998


No 121
>PF06128 Shigella_OspC:  Shigella flexneri OspC protein;  InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC. The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].
Probab=95.22  E-value=0.071  Score=44.70  Aligned_cols=119  Identities=12%  Similarity=0.157  Sum_probs=74.9

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCC----CCcchhHHHHHHhhcc
Q 037504           99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSL----KDDDCIELLVKLIETD  174 (396)
Q Consensus        99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~----~~~~g~~~l~~~~~~~  174 (396)
                      |--|+...+.+-+.-++....          .-.+++-+++..+..+++-+|++.-...-    ....+           
T Consensus       157 ledAV~AsN~~~i~~~VtdKk----------dA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~-----------  215 (284)
T PF06128_consen  157 LEDAVKASNYEEISNLVTDKK----------DAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKE-----------  215 (284)
T ss_pred             HHHHHhhcCHHHHHHHhcchH----------HHHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcc-----------
Confidence            445666666666655553221          35678889998899999999998754111    11111           


Q ss_pred             chhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcH
Q 037504          175 SYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMR  254 (396)
Q Consensus       175 ~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~  254 (396)
                        ..-+.++...                         |.....++++++.+.+-.-.. ...+-+.|.|.|.-|+.+++.
T Consensus       216 --~ydieY~LS~-------------------------h~a~~kvL~~Fi~~Glv~vN~-~F~~~NSGdtMLDNA~Ky~~~  267 (284)
T PF06128_consen  216 --LYDIEYLLSE-------------------------HSASYKVLEYFINRGLVDVNK-KFQKVNSGDTMLDNAMKYKNS  267 (284)
T ss_pred             --hhhHHHHHhh-------------------------cCCcHHHHHHHHhccccccch-hhhccCCcchHHHhHHhcCcH
Confidence              1222332221                         333466777777654322221 223456799999999999999


Q ss_pred             HHHHHHHhhccc
Q 037504          255 EIFKFIFEISSV  266 (396)
Q Consensus       255 ~~v~~Ll~~g~~  266 (396)
                      +++.+|+++|+-
T Consensus       268 emi~~Llk~GA~  279 (284)
T PF06128_consen  268 EMIAFLLKYGAI  279 (284)
T ss_pred             HHHHHHHHcCcc
Confidence            999999999995


No 122
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=93.67  E-value=2.5  Score=34.60  Aligned_cols=143  Identities=17%  Similarity=0.153  Sum_probs=84.0

Q ss_pred             CCchHH-HHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHH
Q 037504           57 LGDTAL-HVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPI  135 (396)
Q Consensus        57 ~g~t~L-h~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpL  135 (396)
                      ....+| .-|+..+-..+++..-+..  .+     .-...++.+-.||+..+.++|++.-+   ++. +  .  +-.+-.
T Consensus        44 c~~~CLl~HAVk~nmL~ILqkyke~L--~~-----~~~~~q~LFElAC~~qkydiV~WI~q---nL~-i--~--~~~~iF  108 (192)
T PF03158_consen   44 CDMWCLLYHAVKYNMLSILQKYKEDL--EN-----ERYLNQELFELACEEQKYDIVKWIGQ---NLH-I--Y--NPEDIF  108 (192)
T ss_pred             CCHHHHHHHHHHcCcHHHHHHHHHHh--hc-----chhHHHHHHHHHHHHccccHHHHHhh---ccC-C--C--Cchhhh
Confidence            445554 4577888888887776654  11     12345678888999999999999832   221 1  1  334456


Q ss_pred             HHHHhcCCHHHHH----HHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhh
Q 037504          136 VGAASLGHTEVVE----FLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVE  211 (396)
Q Consensus       136 h~A~~~~~~~~v~----~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  211 (396)
                      -.|....+.++..    +++++.. +..+.+....+         ..-|..|+.+|                        
T Consensus       109 dIA~~~kDlsLyslGY~l~~~~~~-~~~~~d~~~ll---------~~hl~~a~~kg------------------------  154 (192)
T PF03158_consen  109 DIAFAKKDLSLYSLGYKLLFNRMM-SEHNEDPTSLL---------TQHLEKAAAKG------------------------  154 (192)
T ss_pred             hhhhhccchhHHHHHHHHHHhhcc-cccccCHHHHH---------HHHHHHHHHCC------------------------
Confidence            6777777766532    1222211 11111111111         35567777777                        


Q ss_pred             hHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 037504          212 NERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE  262 (396)
Q Consensus       212 ~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~  262 (396)
                         .+..+.+.++     ++..++      .+.|-.|+.+++.+++.+++.
T Consensus       155 ---ll~F~letlk-----ygg~~~------~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  155 ---LLPFVLETLK-----YGGNVD------IIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             ---CHHHHHHHHH-----cCCccc------HHHHHHHHHhhHHHHHHHhhc
Confidence               3455444443     444333      288999999999999888764


No 123
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=90.25  E-value=0.59  Score=32.56  Aligned_cols=20  Identities=30%  Similarity=0.296  Sum_probs=9.6

Q ss_pred             HHHHHHHcCCHHHHHHHHhc
Q 037504           98 ALFYAAASGSVELVKATMEG  117 (396)
Q Consensus        98 pLh~A~~~g~~~~v~~Ll~~  117 (396)
                      .+..|+...+-+++++|++.
T Consensus        35 ~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen   35 CLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHHhhHHHHHHHHHh
Confidence            34444444444444444443


No 124
>PF11929 DUF3447:  Domain of unknown function (DUF3447);  InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain. These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it.  The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].
Probab=88.95  E-value=1.2  Score=30.93  Aligned_cols=49  Identities=12%  Similarity=0.239  Sum_probs=40.7

Q ss_pred             chHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHh
Q 037504           24 RLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKM   81 (396)
Q Consensus        24 ~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~   81 (396)
                      ...+..|+..|+.|+++..++...  +    +   ..++..|+...+-+++++|++..
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~~--~----~---~~~l~~AI~~H~n~i~~~l~~~y   55 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKNK--P----D---NDCLEYAIKSHNNEIADWLIENY   55 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHhc--c----H---HHHHHHHHHHhhHHHHHHHHHhc
Confidence            356899999999999999886521  1    2   67899999999999999999973


No 125
>PF03158 DUF249:  Multigene family 530 protein;  InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses. These proteins may be involved in promoting survival of infected macrophages [].
Probab=86.96  E-value=5.5  Score=32.69  Aligned_cols=45  Identities=22%  Similarity=0.405  Sum_probs=32.2

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHh
Q 037504           99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYR  152 (396)
Q Consensus        99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~  152 (396)
                      |.+|+..|-+.-+...+++|.++         ..++|-.|+.+++..++.+++.
T Consensus       147 l~~a~~kgll~F~letlkygg~~---------~~~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNV---------DIIVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcc---------cHHHHHHHHHhhHHHHHHHhhc
Confidence            56777777777777777777662         2267778888888777777653


No 126
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=70.23  E-value=86  Score=28.51  Aligned_cols=229  Identities=13%  Similarity=0.051  Sum_probs=125.0

Q ss_pred             cccccccchHHHHHHHcCCHHHHHHHHHhC-ccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCC
Q 037504           17 VEEIRTRRLKLYRVALNGDWARAKVIYDEH-KDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIG   95 (396)
Q Consensus        17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g   95 (396)
                      +-.+..|.-.|..+...++.+....+++.- +.-+....|..|.-.+.-....+..+-...+++.-. .++---..|..|
T Consensus        15 l~~~~~gsr~lQ~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~g~~vvq~~l~~~~~~~~~~i~~~~~-~~~~~l~~~~~g   93 (322)
T cd07920          15 FAKDQHGSRFLQQKLEEATPEEKELIFDEILPHVVELMVDPFGNYVIQKLFEHGTEEQRLQLLEKIL-GHVVRLSLDMYG   93 (322)
T ss_pred             ccCCchhhHHHHHHhccCCHHHHHHHHHHHHHhHHHHhcCccccHHHHHHHHhCCHHHHHHHHHHHH-HHHHHHcccchh
Confidence            345778888899999999888887777651 222233347889888888888888776666665431 122113567778


Q ss_pred             CcHHHHHHHcCCHHHHHHHHhc-CCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc----cCCCCcchhHHHHHH
Q 037504           96 CTALFYAAASGSVELVKATMEG-NEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK----NSLKDDDCIELLVKL  170 (396)
Q Consensus        96 ~tpLh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~----~~~~~~~g~~~l~~~  170 (396)
                      .-.+--+...+..+-...+++. ...+. .-..|..|...+..+...+..+..+.+++.-.    .-..+..|       
T Consensus        94 ~~vlqkll~~~~~~~~~~i~~~l~~~~~-~L~~d~~gn~Vvq~~l~~~~~~~~~~i~~~l~~~~~~l~~~~~G-------  165 (322)
T cd07920          94 CRVIQKLLESISEEQISLLVKELRGHVV-ELVKDQNGNHVIQKCIEKFPPEDLQFIIDAFKGNCVALSTHPYG-------  165 (322)
T ss_pred             HHHHHHHHHhcCHHHHHHHHHHHHHCHH-HHhhcccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCccc-------
Confidence            7777777766665444433332 11111 12335578777777777766666666554322    11122222       


Q ss_pred             hhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHH
Q 037504          171 IETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVS  250 (396)
Q Consensus       171 ~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~  250 (396)
                            ...+.-.....                   .    ......+++.+...+.      -=..|..|+..+..+..
T Consensus       166 ------~~vvq~~l~~~-------------------~----~~~~~~l~~~l~~~~~------~L~~d~~Gn~vvq~~l~  210 (322)
T cd07920         166 ------CRVIQRCLEHC-------------------S----EEQREPLLEEILEHAL------ELVQDQFGNYVVQHVLE  210 (322)
T ss_pred             ------cHHHHHHHHhC-------------------C----HHHHHHHHHHHHHHHH------HHhcCCchhhHHHHHHh
Confidence                  22222222211                   0    1112223333333221      11347789999998888


Q ss_pred             cCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCC
Q 037504          251 NRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPP  290 (396)
Q Consensus       251 ~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~  290 (396)
                      .+..+..+.+++.-.. ++.-=..++.|.-.+..+...+.
T Consensus       211 ~~~~~~~~~i~~~l~~-~~~~l~~~k~Gs~Vve~~l~~~~  249 (322)
T cd07920         211 LGDPDDTSRIIEKLLG-NIVQLSCHKFASNVVEKCLKHAS  249 (322)
T ss_pred             cCCHHHHHHHHHHHHH-HHHHHHcCcchHHHHHHHHHHCC
Confidence            8766544444432211 11011467778777777666654


No 127
>cd07920 Pumilio Pumilio-family RNA binding domain. Puf repeats (also labelled PUM-HD or Pumilio homology domain) mediate sequence specific RNA binding in fly Pumilio, worm FBF-1 and FBF-2, and many other proteins such as vertebrate Pumilio. These proteins function as translational repressors in early embryonic development by binding to sequences in the 3' UTR of target mRNAs, such as the nanos response element (NRE) in fly Hunchback mRNA, or the point mutation element (PME) in worm fem-3 mRNA. Other proteins that contain Puf domains are also plausible RNA binding proteins. Yeast PUF1 (JSN1), for instance, appears to contain a single RNA-recognition motif (RRM) domain. Puf repeat proteins have been observed to function asymmetrically and may be responsible for creating protein gradients involved in the specification of cell fate and differentiation. Puf domains usually occur as a tandem repeat of 8 domains. This model encompasses all 8 tandem repeats. Some proteins may have fewer (canon
Probab=64.51  E-value=1.1e+02  Score=27.73  Aligned_cols=91  Identities=8%  Similarity=0.003  Sum_probs=45.3

Q ss_pred             cccccchHHHHHHHcCCHHHHHHHHHhC-ccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504           19 EIRTRRLKLYRVALNGDWARAKVIYDEH-KDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT   97 (396)
Q Consensus        19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~-~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t   97 (396)
                      .+..|+..+-.....+..+....+++.- |.-.....+..|.-.+.-+...+..+....+++.-. ..+..-..|..|..
T Consensus        53 ~~~~g~~vvq~~l~~~~~~~~~~i~~~~~~~~~~l~~~~~g~~vlqkll~~~~~~~~~~i~~~l~-~~~~~L~~d~~gn~  131 (322)
T cd07920          53 VDPFGNYVIQKLFEHGTEEQRLQLLEKILGHVVRLSLDMYGCRVIQKLLESISEEQISLLVKELR-GHVVELVKDQNGNH  131 (322)
T ss_pred             cCccccHHHHHHHHhCCHHHHHHHHHHHHHHHHHHcccchhHHHHHHHHHhcCHHHHHHHHHHHH-HCHHHHhhcccccH
Confidence            4555666666666666665555554432 222222335666666666666655444444443320 11211345566666


Q ss_pred             HHHHHHHcCCHHH
Q 037504           98 ALFYAAASGSVEL  110 (396)
Q Consensus        98 pLh~A~~~g~~~~  110 (396)
                      .+..+...+..+.
T Consensus       132 Vvq~~l~~~~~~~  144 (322)
T cd07920         132 VIQKCIEKFPPED  144 (322)
T ss_pred             HHHHHHHhCCHHH
Confidence            6655555544433


No 128
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=61.85  E-value=4.9  Score=33.24  Aligned_cols=51  Identities=16%  Similarity=0.255  Sum_probs=40.8

Q ss_pred             cCCCCcHHHHHHHcCcHHHHH-HHHhhccccccccccccCCCCchhhhhhcC
Q 037504          238 DENGHTIFHIAVSNRMREIFK-FIFEISSVADLLFDSKDKDGNNILHLAGKL  288 (396)
Q Consensus       238 d~~g~t~Lh~A~~~~~~~~v~-~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~  288 (396)
                      |.+-..|||-|+.-++.+++- ++++..+...-.+|..|.+|..+|.+|..+
T Consensus       219 d~kTe~~LHk~iki~REDVl~LYfie~dakiP~~LNd~D~nG~~ALdiAL~~  270 (280)
T KOG4591|consen  219 DGKTENPLHKAIKIEREDVLFLYFIEMDAKIPGILNDADHNGALALDIALCR  270 (280)
T ss_pred             cCCCcchhHHhhhccccceeeehhhhccccccccccccCCCchHHHHHHHHH
Confidence            556678999999999888764 677777665545888999999999998654


No 129
>KOG0513 consensus Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=26.58  E-value=36  Score=33.24  Aligned_cols=30  Identities=7%  Similarity=-0.030  Sum_probs=17.8

Q ss_pred             hcccCCCCcHHHHHHHcCCHHHHHHHHhcC
Q 037504           89 AKRNRIGCTALFYAAASGSVELVKATMEGN  118 (396)
Q Consensus        89 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g  118 (396)
                      +.....+.++.+++...|....++......
T Consensus        49 ~~~~s~~~~~~~l~~~~g~~~~~~~a~~fD   78 (503)
T KOG0513|consen   49 NQGVSLAYLELRLQNIDGDPSAARLADYFD   78 (503)
T ss_pred             hhhhhhcccHHHHHhccCChHhhHhhhccC
Confidence            334455666777777777766665554443


No 130
>KOG4591 consensus Uncharacterized conserved protein, contains BTB/POZ domain [General function prediction only]
Probab=25.93  E-value=58  Score=27.18  Aligned_cols=53  Identities=17%  Similarity=0.184  Sum_probs=35.5

Q ss_pred             cCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504          275 DKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH  341 (396)
Q Consensus       275 d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~  341 (396)
                      |.+-..|||-|++.+..+++.+-.   +++          . -.-+.-.|..|.+|-.+|++|.-+.
T Consensus       219 d~kTe~~LHk~iki~REDVl~LYf---ie~----------d-akiP~~LNd~D~nG~~ALdiAL~~~  271 (280)
T KOG4591|consen  219 DGKTENPLHKAIKIEREDVLFLYF---IEM----------D-AKIPGILNDADHNGALALDIALCRE  271 (280)
T ss_pred             cCCCcchhHHhhhccccceeeehh---hhc----------c-ccccccccccCCCchHHHHHHHHHH
Confidence            455667999999999887765430   000          0 0023457788999999999986543


No 131
>PF04053 Coatomer_WDAD:  Coatomer WD associated region ;  InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits.  This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=21.84  E-value=3.1e+02  Score=26.49  Aligned_cols=161  Identities=14%  Similarity=0.092  Sum_probs=0.0

Q ss_pred             HHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcC
Q 037504           27 LYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASG  106 (396)
Q Consensus        27 Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g  106 (396)
                      +..|+..++.+.+..++.......... ...|.....+--..|..|+.-.+..--              .+=+.+|.+.|
T Consensus       268 fk~av~~~d~~~v~~~i~~~~ll~~i~-~~~~~~i~~fL~~~G~~e~AL~~~~D~--------------~~rFeLAl~lg  332 (443)
T PF04053_consen  268 FKTAVLRGDFEEVLRMIAASNLLPNIP-KDQGQSIARFLEKKGYPELALQFVTDP--------------DHRFELALQLG  332 (443)
T ss_dssp             HHHHHHTT-HHH-----HHHHTGGG---HHHHHHHHHHHHHTT-HHHHHHHSS-H--------------HHHHHHHHHCT
T ss_pred             HHHHHHcCChhhhhhhhhhhhhcccCC-hhHHHHHHHHHHHCCCHHHHHhhcCCh--------------HHHhHHHHhcC


Q ss_pred             CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhc
Q 037504          107 SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARK  186 (396)
Q Consensus       107 ~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~  186 (396)
                      +++.+.-+.+.-.+       ...-..-=..|...|+.++++.-+.+.. +.                  ...+.+....
T Consensus       333 ~L~~A~~~a~~~~~-------~~~W~~Lg~~AL~~g~~~lAe~c~~k~~-d~------------------~~L~lLy~~~  386 (443)
T PF04053_consen  333 NLDIALEIAKELDD-------PEKWKQLGDEALRQGNIELAEECYQKAK-DF------------------SGLLLLYSST  386 (443)
T ss_dssp             -HHHHHHHCCCCST-------HHHHHHHHHHHHHTTBHHHHHHHHHHCT--H------------------HHHHHHHHHC
T ss_pred             CHHHHHHHHHhcCc-------HHHHHHHHHHHHHcCCHHHHHHHHHhhc-Cc------------------cccHHHHHHh


Q ss_pred             CCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcH-HHHHHHHhhc
Q 037504          187 NLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMR-EIFKFIFEIS  264 (396)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~-~~v~~Ll~~g  264 (396)
                      |                           ..+.++.+.+         +-....+-+..++.+..-|+. ++++.|++.|
T Consensus       387 g---------------------------~~~~L~kl~~---------~a~~~~~~n~af~~~~~lgd~~~cv~lL~~~~  429 (443)
T PF04053_consen  387 G---------------------------DREKLSKLAK---------IAEERGDINIAFQAALLLGDVEECVDLLIETG  429 (443)
T ss_dssp             T----------------------------HHHHHHHHH---------HHHHTT-HHHHHHHHHHHT-HHHHHHHHHHTT
T ss_pred             C---------------------------CHHHHHHHHH---------HHHHccCHHHHHHHHHHcCCHHHHHHHHHHcC


Done!