Query 037504
Match_columns 396
No_of_seqs 327 out of 4152
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 22:23:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037504.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037504hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1n11_A Ankyrin; clathrin, BAND 100.0 1.5E-45 5.3E-50 352.4 22.4 314 2-340 25-387 (437)
2 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-45 4.3E-50 342.3 19.1 269 18-346 19-329 (351)
3 1n11_A Ankyrin; clathrin, BAND 100.0 3.2E-44 1.1E-48 343.2 21.3 298 19-341 10-355 (437)
4 1wdy_A 2-5A-dependent ribonucl 100.0 4.8E-43 1.6E-47 315.2 21.3 256 21-341 3-264 (285)
5 2xai_A ASB-9, ankyrin repeat a 100.0 1.1E-42 3.7E-47 309.6 22.1 245 22-339 2-247 (261)
6 3d9h_A CDNA FLJ77766, highly s 100.0 4.9E-43 1.7E-47 315.7 18.4 244 19-339 11-264 (285)
7 1wdy_A 2-5A-dependent ribonucl 100.0 2.3E-41 7.8E-46 304.2 19.9 257 2-328 16-284 (285)
8 1yyh_A HN1;, notch 1, ankyrin 100.0 8.7E-42 3E-46 302.3 16.7 223 18-297 5-242 (253)
9 1k1a_A B-cell lymphoma 3-encod 100.0 4.7E-41 1.6E-45 295.0 19.1 226 18-297 4-235 (241)
10 3ljn_A Hypothetical protein; a 100.0 7.4E-42 2.5E-46 319.0 14.7 252 17-339 14-298 (364)
11 1oy3_D Transcription factor in 100.0 3.2E-41 1.1E-45 303.1 17.1 249 19-341 5-269 (282)
12 1s70_B 130 kDa myosin-binding 100.0 5.1E-41 1.7E-45 304.7 17.0 250 15-346 32-281 (299)
13 2fo1_E LIN-12 protein; beta-ba 100.0 3.8E-41 1.3E-45 315.0 15.7 239 3-297 105-365 (373)
14 2fo1_E LIN-12 protein; beta-ba 100.0 4.5E-42 1.5E-46 321.3 9.4 248 18-341 89-357 (373)
15 3aji_A 26S proteasome non-ATPa 100.0 1.7E-40 5.9E-45 289.7 18.3 220 21-297 4-224 (231)
16 3d9h_A CDNA FLJ77766, highly s 100.0 4.6E-40 1.6E-44 296.3 21.5 223 13-297 49-272 (285)
17 3b7b_A Euchromatic histone-lys 100.0 3.7E-40 1.3E-44 288.7 19.3 216 19-292 7-224 (237)
18 4g8k_A 2-5A-dependent ribonucl 100.0 6.1E-40 2.1E-44 302.8 20.8 158 19-187 21-179 (337)
19 2dzn_A Probable 26S proteasome 100.0 1.1E-39 3.8E-44 283.9 21.2 213 23-289 2-219 (228)
20 4b93_B Ankyrin repeat domain-c 100.0 1.5E-40 5.2E-45 296.4 15.0 217 17-290 5-230 (269)
21 1yyh_A HN1;, notch 1, ankyrin 100.0 1.5E-40 5E-45 294.4 12.8 223 49-346 2-240 (253)
22 4g8k_A 2-5A-dependent ribonucl 100.0 1.3E-39 4.5E-44 300.6 19.2 264 2-340 36-311 (337)
23 3b7b_A Euchromatic histone-lys 100.0 1.6E-39 5.6E-44 284.6 18.2 218 49-342 3-222 (237)
24 2xai_A ASB-9, ankyrin repeat a 100.0 1.5E-39 5.2E-44 289.2 16.7 208 57-340 2-209 (261)
25 1k1a_A B-cell lymphoma 3-encod 100.0 2.6E-39 9E-44 283.9 17.3 216 55-341 6-227 (241)
26 2dzn_A Probable 26S proteasome 100.0 2.1E-38 7.1E-43 275.9 16.6 210 58-339 2-217 (228)
27 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-37 3.6E-42 288.9 22.3 228 3-285 36-320 (351)
28 3kea_A K1L; tropism, ANK repea 100.0 2.2E-38 7.6E-43 285.2 16.9 224 6-297 15-240 (285)
29 3eu9_A Huntingtin-interacting 100.0 7.5E-38 2.6E-42 274.1 19.6 223 18-297 4-229 (240)
30 3aji_A 26S proteasome non-ATPa 100.0 5.4E-38 1.8E-42 273.9 17.9 217 55-345 3-220 (231)
31 4b93_B Ankyrin repeat domain-c 100.0 3.9E-39 1.3E-43 287.3 9.8 216 55-341 8-229 (269)
32 2f8y_A Notch homolog 1, transl 100.0 1.2E-37 3.9E-42 270.3 18.7 145 2-155 2-149 (223)
33 1ikn_D Protein (I-kappa-B-alph 100.0 9.4E-39 3.2E-43 279.7 8.8 216 19-339 4-228 (236)
34 3ljn_A Hypothetical protein; a 100.0 1.3E-37 4.5E-42 290.3 15.6 244 2-297 31-308 (364)
35 1oy3_D Transcription factor in 100.0 3.3E-37 1.1E-41 276.9 13.5 230 51-340 3-235 (282)
36 2rfa_A Transient receptor pote 100.0 9.6E-36 3.3E-40 259.8 21.5 201 22-266 2-222 (232)
37 1sw6_A Regulatory protein SWI6 100.0 2E-37 7E-42 284.4 8.1 253 3-339 31-325 (327)
38 3hra_A Ankyrin repeat family p 100.0 8.9E-36 3E-40 254.1 17.1 127 21-155 3-130 (201)
39 3kea_A K1L; tropism, ANK repea 100.0 2.1E-36 7.1E-41 272.3 13.8 217 31-328 7-226 (285)
40 2f8y_A Notch homolog 1, transl 100.0 1.2E-36 4E-41 263.9 11.6 208 34-297 2-210 (223)
41 2pnn_A Transient receptor pote 100.0 1.5E-36 5.1E-41 271.7 12.5 222 17-334 7-271 (273)
42 2etb_A Transient receptor pote 100.0 2E-36 6.8E-41 268.3 12.2 191 22-297 1-240 (256)
43 3eu9_A Huntingtin-interacting 100.0 1.2E-35 4.1E-40 260.1 15.5 218 55-346 6-227 (240)
44 4gpm_A Engineered protein OR26 100.0 1.5E-34 5.1E-39 238.8 18.7 156 25-266 6-161 (169)
45 2rfa_A Transient receptor pote 100.0 3.1E-35 1.1E-39 256.5 14.6 205 57-297 2-216 (232)
46 3jxi_A Vanilloid receptor-rela 100.0 3E-35 1E-39 261.3 11.2 130 20-152 2-161 (260)
47 4gpm_A Engineered protein OR26 100.0 2.1E-34 7.3E-39 237.8 15.1 150 60-297 6-155 (169)
48 1sw6_A Regulatory protein SWI6 100.0 9E-35 3.1E-39 266.8 11.9 200 25-289 99-327 (327)
49 1s70_B 130 kDa myosin-binding 100.0 1.4E-33 4.7E-38 255.7 14.6 221 2-288 51-275 (299)
50 2etb_A Transient receptor pote 100.0 2.5E-33 8.4E-38 248.3 13.6 193 57-341 1-232 (256)
51 3v30_A DNA-binding protein rfx 100.0 2.3E-32 7.7E-37 227.1 18.0 170 23-281 2-171 (172)
52 3hra_A Ankyrin repeat family p 100.0 8.6E-33 2.9E-37 235.5 15.3 189 55-297 2-197 (201)
53 1ikn_D Protein (I-kappa-B-alph 100.0 7.1E-33 2.4E-37 242.3 14.0 205 2-290 19-231 (236)
54 4hbd_A KN motif and ankyrin re 100.0 7.4E-33 2.5E-37 247.9 10.3 187 57-297 75-269 (276)
55 2vge_A RELA-associated inhibit 100.0 1.4E-33 4.7E-38 245.4 3.7 188 19-297 17-207 (229)
56 3v30_A DNA-binding protein rfx 100.0 4.9E-32 1.7E-36 225.1 12.4 170 58-333 2-171 (172)
57 2rfm_A Putative ankyrin repeat 100.0 1.1E-31 3.9E-36 227.0 13.9 160 49-297 27-186 (192)
58 1ihb_A P18-INK4C(INK6), cyclin 100.0 2.7E-31 9.3E-36 218.2 15.5 159 22-266 4-162 (162)
59 2rfm_A Putative ankyrin repeat 100.0 4.2E-31 1.5E-35 223.5 17.1 160 19-264 31-190 (192)
60 3v31_A Ankyrin repeat family A 100.0 9.4E-31 3.2E-35 216.2 17.4 159 22-266 2-160 (167)
61 2y1l_E Darpin-8.4; hydrolase-i 100.0 1.4E-30 4.8E-35 215.6 18.2 161 18-264 9-169 (169)
62 2pnn_A Transient receptor pote 100.0 8E-31 2.7E-35 234.4 17.1 199 2-283 24-272 (273)
63 2vge_A RELA-associated inhibit 100.0 5.9E-32 2E-36 235.0 9.1 191 39-340 1-198 (229)
64 3f6q_A Integrin-linked protein 100.0 8.8E-31 3E-35 219.0 15.3 169 21-278 3-171 (179)
65 3jxi_A Vanilloid receptor-rela 100.0 9.7E-32 3.3E-36 238.6 10.0 196 55-341 2-236 (260)
66 3v31_A Ankyrin repeat family A 100.0 7.9E-31 2.7E-35 216.6 14.0 153 57-297 2-154 (167)
67 3twr_A Tankyrase-2; ankyrin re 100.0 8.9E-31 3E-35 215.9 13.6 129 19-155 4-132 (165)
68 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-31 3.7E-36 235.2 8.3 183 21-290 3-193 (239)
69 1bd8_A P19INK4D CDK4/6 inhibit 100.0 7.5E-30 2.6E-34 208.2 16.8 154 23-263 2-155 (156)
70 1awc_B Protein (GA binding pro 100.0 2.6E-30 8.7E-35 210.4 13.7 87 59-153 3-89 (153)
71 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.8E-30 9.5E-35 213.8 14.0 155 55-297 11-165 (169)
72 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.1E-30 3.7E-35 214.7 10.6 154 56-297 3-156 (162)
73 4hbd_A KN motif and ankyrin re 100.0 5.5E-31 1.9E-35 235.7 8.5 183 95-341 76-261 (276)
74 1awc_B Protein (GA binding pro 100.0 2.1E-29 7.2E-34 205.0 17.1 123 23-155 2-124 (153)
75 3f6q_A Integrin-linked protein 100.0 3.4E-30 1.2E-34 215.4 11.5 169 56-330 3-171 (179)
76 3twr_A Tankyrase-2; ankyrin re 100.0 5.7E-30 2E-34 211.0 11.7 155 55-297 5-159 (165)
77 2aja_A Ankyrin repeat family p 100.0 1.3E-31 4.4E-36 248.6 -0.5 238 20-342 89-361 (376)
78 1ycs_B 53BP2, P53BP2; ankyrin 100.0 8.7E-30 3E-34 223.1 11.0 177 55-339 2-190 (239)
79 1bd8_A P19INK4D CDK4/6 inhibit 100.0 3.4E-29 1.2E-33 204.4 12.2 151 58-297 2-152 (156)
80 2aja_A Ankyrin repeat family p 100.0 1.9E-29 6.6E-34 234.0 3.9 244 2-296 103-367 (376)
81 1d9s_A Cyclin-dependent kinase 99.9 1.4E-27 4.7E-32 190.2 11.9 127 19-155 8-135 (136)
82 3t8k_A Uncharacterized protein 99.9 4E-28 1.4E-32 203.5 8.3 158 23-266 6-179 (186)
83 1bi7_B P16INK4A, MTS1, multipl 99.9 1.1E-27 3.8E-32 195.4 10.4 142 55-285 9-151 (156)
84 1d9s_A Cyclin-dependent kinase 99.9 3.3E-27 1.1E-31 187.9 11.2 121 47-176 2-124 (136)
85 3t8k_A Uncharacterized protein 99.9 6.9E-28 2.4E-32 202.1 6.2 150 58-297 6-173 (186)
86 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-26 5.7E-31 183.9 13.9 128 18-154 9-136 (136)
87 1bi7_B P16INK4A, MTS1, multipl 99.9 7.9E-27 2.7E-31 190.3 8.7 137 18-164 7-145 (156)
88 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.4E-25 4.6E-30 175.7 14.5 125 22-155 1-125 (126)
89 1n0r_A 4ANK, 4 ankyrin repeats 99.9 4.4E-25 1.5E-29 172.8 15.2 126 57-266 1-126 (126)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 2.5E-25 8.6E-30 177.0 13.0 126 55-264 11-136 (136)
91 3ui2_A Signal recognition part 99.9 1.8E-25 6.3E-30 196.1 12.6 28 239-266 158-185 (244)
92 3c5r_A BARD-1, BRCA1-associate 99.9 9.4E-26 3.2E-30 179.7 6.8 129 18-155 5-133 (137)
93 3c5r_A BARD-1, BRCA1-associate 99.9 6.4E-25 2.2E-29 174.9 9.6 124 90-297 5-128 (137)
94 3aaa_C Myotrophin, protein V-1 99.9 1E-24 3.5E-29 170.3 9.5 117 20-145 4-120 (123)
95 3deo_A Signal recognition part 99.9 1.3E-24 4.4E-29 182.1 10.5 111 20-140 41-152 (183)
96 2b0o_E UPLC1; arfgap, structur 99.9 4E-24 1.4E-28 193.1 14.5 141 95-290 151-298 (301)
97 3deo_A Signal recognition part 99.9 1.9E-24 6.4E-29 181.1 10.2 125 55-187 41-170 (183)
98 2b0o_E UPLC1; arfgap, structur 99.9 4.2E-24 1.4E-28 193.0 12.7 140 23-188 151-298 (301)
99 3ehr_A Osteoclast-stimulating 99.9 1.4E-24 5E-29 187.6 8.1 128 19-155 69-197 (222)
100 3ehr_A Osteoclast-stimulating 99.9 3.3E-24 1.1E-28 185.4 8.2 129 55-267 70-199 (222)
101 3ui2_A Signal recognition part 99.9 6.3E-24 2.2E-28 186.3 7.5 120 23-155 15-135 (244)
102 3aaa_C Myotrophin, protein V-1 99.9 1.1E-22 3.8E-27 158.6 10.7 113 55-187 4-117 (123)
103 1dcq_A PYK2-associated protein 99.9 5.8E-22 2E-26 177.0 15.2 126 22-155 129-262 (278)
104 1dcq_A PYK2-associated protein 99.9 1.3E-21 4.3E-26 174.8 17.1 46 231-288 228-273 (278)
105 1n0q_A 3ANK, 3 ankyrin repeats 99.9 3.8E-22 1.3E-26 147.4 11.0 91 58-155 2-92 (93)
106 3jue_A Arfgap with coiled-coil 99.9 4.3E-22 1.5E-26 183.9 13.6 126 21-155 197-325 (368)
107 1n0q_A 3ANK, 3 ankyrin repeats 99.9 4.7E-22 1.6E-26 146.9 10.6 93 22-120 1-93 (93)
108 3lvq_E ARF-GAP with SH3 domain 99.9 7.3E-22 2.5E-26 191.0 14.7 125 23-155 132-264 (497)
109 3jue_A Arfgap with coiled-coil 99.9 8.2E-22 2.8E-26 182.1 13.3 149 56-289 197-348 (368)
110 3lvq_E ARF-GAP with SH3 domain 99.9 2E-21 7E-26 187.9 15.0 136 58-287 132-276 (497)
111 2l6b_A NR1C; ankyrin, consensu 99.8 1.6E-21 5.6E-26 150.0 5.6 107 19-134 5-111 (115)
112 2l6b_A NR1C; ankyrin, consensu 99.8 7E-21 2.4E-25 146.5 8.5 108 90-281 4-111 (115)
113 2zgd_A 3 repeat synthetic anky 99.8 4E-19 1.4E-23 135.4 9.9 89 55-150 21-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1.1E-18 3.8E-23 133.0 9.7 92 17-114 18-109 (110)
115 3gvo_A Pumilio 2, pumilio homo 56.3 70 0.0024 28.3 9.9 96 19-115 33-129 (351)
116 3gvo_A Pumilio 2, pumilio homo 33.5 81 0.0028 27.9 6.4 153 19-173 69-227 (351)
117 3zrh_A Ubiquitin thioesterase 29.9 1E+02 0.0036 27.9 6.1 53 28-81 27-92 (454)
118 3mkq_B Coatomer subunit alpha; 27.0 2.3E+02 0.0079 22.3 8.8 51 24-80 9-59 (177)
119 1gp8_A Protein (scaffolding pr 26.8 45 0.0016 18.7 2.1 17 99-115 17-33 (40)
No 1
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=1.5e-45 Score=352.36 Aligned_cols=314 Identities=20% Similarity=0.204 Sum_probs=204.9
Q ss_pred CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK 80 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 80 (396)
||.+++++|+..+.+.. .+..|.||||+|+..|+.+++++|++. +++++.+ +..|.||||+|+..|+.++|++|++.
T Consensus 25 g~~~~v~~Ll~~g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ 102 (437)
T 1n11_A 25 GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQN-KAKVNAK-AKDDQTPLHCAARIGHTNMVKLLLEN 102 (437)
T ss_dssp TCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-TCCSSCC-CTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHhC
Confidence 55666677766654333 455677777777777777777777765 6667666 67777777777777777777777777
Q ss_pred hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCC
Q 037504 81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLK 159 (396)
Q Consensus 81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~ 159 (396)
| +++ +..|..|.||||+|+..|+.+++++|++++++ ....+..|.||||+|+..|+.+++++|++.++ .+..
T Consensus 103 g--a~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~ 175 (437)
T 1n11_A 103 N--ANP--NLATTAGHTPLHIAAREGHVETVLALLEKEAS---QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAA 175 (437)
T ss_dssp T--CCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred C--CCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC---CcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCC
Confidence 6 555 66777777777777777777777777777766 33445567777777777777777777777766 4555
Q ss_pred CcchhHHHHHHhhccc--------------------hhhHHHHHHhcCCCCCCCCCcchhhhhhhccch---------hh
Q 037504 160 DDDCIELLVKLIETDS--------------------YETALHVLARKNLTSSNQNPRGIFQRYFNLGAK---------AV 210 (396)
Q Consensus 160 ~~~g~~~l~~~~~~~~--------------------~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~---------~~ 210 (396)
+..|.++|+.++..+. +.||||+|+..++. ++.+.+.+.+.. ++
T Consensus 176 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------~~~~~Ll~~g~~~~~~~~~g~t~ 248 (437)
T 1n11_A 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQV-------EVARSLLQYGGSANAESVQGVTP 248 (437)
T ss_dssp CSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCH-------HHHHHHHHTTCCTTCCCTTCCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCH-------HHHHHHHHcCCCCCCCCCCCCCH
Confidence 6667777766654322 25677777766632 333333332211 11
Q ss_pred ----hhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhh
Q 037504 211 ----ENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAG 286 (396)
Q Consensus 211 ----~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~ 286 (396)
......+++++++ ..+.+++..|..|+||||+|++.|+.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 249 L~~A~~~g~~~~v~~Ll-----~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~ 319 (437)
T 1n11_A 249 LHLAAQEGHAEMVALLL-----SKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM----VDATTRMGYTPLHVAS 319 (437)
T ss_dssp HHHHHHTTCHHHHHHHH-----TTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCC----TTCCCSSCCCHHHHHH
T ss_pred HHHHHHCCCHHHHHHHH-----hcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCcc----CCCCCCCCCCHHHHHH
Confidence 1111234444443 34566677777777777777777777777777777777 6777777777777777
Q ss_pred cCCCCCccccccc-------------hhHhHHHHHHHHHHHhhhc-chhhhhhhcCCCCCchhhHHHH
Q 037504 287 KLPPLNRLNIVSV-------------AALQLQRELLWFQEVKKVV-PRKFAEEKNNDGLTPGDLFIKE 340 (396)
Q Consensus 287 ~~~~~~~~~~l~~-------------~~~~~~~~l~~~~~v~~l~-~~~~~~~~~~~g~tpl~~a~~~ 340 (396)
..|+.+++++|.. ++++.+...+..+.|+.|+ .|++++.+|.+|+||+++|.+.
T Consensus 320 ~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~ 387 (437)
T 1n11_A 320 HYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRL 387 (437)
T ss_dssp HSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHT
T ss_pred HcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHc
Confidence 7777777777621 4556665555555555555 5677777777777777777654
No 2
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.2e-45 Score=342.26 Aligned_cols=269 Identities=17% Similarity=0.174 Sum_probs=236.5
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
..+..+.++||.|+..|+.+.|+.++...+.+++.. |..|.||||+|+..|+.++|++|++.| +++ +.+|..|.|
T Consensus 19 ~~~~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t 93 (351)
T 3utm_A 19 LTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQHG--ADV--HAKDKGGLV 93 (351)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCC
T ss_pred eeccccchhHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CccCCCCCc
Confidence 357788999999999999999999999889999888 999999999999999999999999998 776 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhh----
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIE---- 172 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~---- 172 (396)
|||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.++ ....+..|.++++.+..
T Consensus 94 ~L~~A~~~g~~~iv~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~ 170 (351)
T 3utm_A 94 PLHNACSYGHYEVTELLLKHGAC---VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELR 170 (351)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhH
Confidence 99999999999999999999999 55667799999999999999999999999998 66677778777765532
Q ss_pred -------------------------------------ccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504 173 -------------------------------------TDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERA 215 (396)
Q Consensus 173 -------------------------------------~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
...+.||||+|+..+ +...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~------------------------~~~~ 226 (351)
T 3utm_A 171 ERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASL------------------------HPKR 226 (351)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCC------------------------STTH
T ss_pred HHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHh------------------------CccH
Confidence 123468888888875 3335
Q ss_pred HHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccc
Q 037504 216 LELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLN 295 (396)
Q Consensus 216 ~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~ 295 (396)
.++++.++ ..+.+++.+|..|+||||+|++.|+.+++++|+++|++ +|.+|..|+||||+|+..|+.++++
T Consensus 227 ~~~~~~Ll-----~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~----~n~~d~~g~t~L~~A~~~~~~~~v~ 297 (351)
T 3utm_A 227 KQVAELLL-----RKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAK----MNALDSLGQTALHRAALAGHLQTCR 297 (351)
T ss_dssp HHHHHHHH-----HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred HHHHHHHH-----HcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 66666665 46788999999999999999999999999999999999 8999999999999999999999888
Q ss_pred cccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHhHHHHH
Q 037504 296 IVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEHEELKK 346 (396)
Q Consensus 296 ~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~~~~~~ 346 (396)
+| +..|++++.+|..|+||+++|.+....+..
T Consensus 298 ~L-------------------l~~gad~~~~~~~g~tal~~a~~~~~~~l~ 329 (351)
T 3utm_A 298 LL-------------------LSYGSDPSIISLQGFTAAQMGNEAVQQILS 329 (351)
T ss_dssp HH-------------------HHTTCCTTCCCTTSCCHHHHSCHHHHHHHH
T ss_pred HH-------------------HHcCCCCCCcCCCCCChhhhhhHHHHHHHH
Confidence 87 778999999999999999999665444433
No 3
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=3.2e-44 Score=343.23 Aligned_cols=298 Identities=18% Similarity=0.167 Sum_probs=249.2
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
.+..|.||||+|+..|+.++|++|++. |++++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|+||
T Consensus 10 ~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~ 83 (437)
T 1n11_A 10 GGESGLTPLHVASFMGHLPIVKNLLQR-GASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNK--AKV--NAKAKDDQTP 83 (437)
T ss_dssp -----CCHHHHHHHHTCHHHHHHHHHT-TCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHT--CCS--SCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CCC--CCCCCCCCCH
Confidence 577899999999999999999999986 8999888 899999999999999999999999998 777 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhcc---
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETD--- 174 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~--- 174 (396)
||+|++.|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.++ ....+..|.++|+.+...+
T Consensus 84 L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~ 160 (437)
T 1n11_A 84 LHCAARIGHTNMVKLLLENNAN---PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVR 160 (437)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHH
T ss_pred HHHHHHCCCHHHHHHHHhCCCC---CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHH
Confidence 9999999999999999999999 55567799999999999999999999999988 5567788999998876543
Q ss_pred -----------------chhhHHHHHHhcCCCCCCCCCcchhhhhhhccch---------hh----hhHHHHHHHHHHHH
Q 037504 175 -----------------SYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK---------AV----ENERALELVELLWE 224 (396)
Q Consensus 175 -----------------~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~---------~~----~~~~~~~~~~~ll~ 224 (396)
.+.||||+|+..++. ++++.+.+.+.. ++ ......++++.++
T Consensus 161 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~-------~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll- 232 (437)
T 1n11_A 161 VAELLLERDAHPNAAGKNGLTPLHVAVHHNNL-------DIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL- 232 (437)
T ss_dssp HHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCH-------HHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHH-
T ss_pred HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCH-------HHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHH-
Confidence 347999999998843 444444433322 11 1122345555554
Q ss_pred HHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccc-----
Q 037504 225 NFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSV----- 299 (396)
Q Consensus 225 ~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~----- 299 (396)
..+..++..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|..
T Consensus 233 ----~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~----~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~ 304 (437)
T 1n11_A 233 ----QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN----GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV 304 (437)
T ss_dssp ----HTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCT
T ss_pred ----HcCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCC----CCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccC
Confidence 45777899999999999999999999999999999999 88899999999999999999998888732
Q ss_pred --------hhHhHHHHHHHHHHHhhhc-chhhhhhhcCCCCCchhhHHHHh
Q 037504 300 --------AALQLQRELLWFQEVKKVV-PRKFAEEKNNDGLTPGDLFIKEH 341 (396)
Q Consensus 300 --------~~~~~~~~l~~~~~v~~l~-~~~~~~~~~~~g~tpl~~a~~~~ 341 (396)
++++.+...+..+.|+.|+ .|++++.+|..|.|||++|.+..
T Consensus 305 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g 355 (437)
T 1n11_A 305 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQG 355 (437)
T ss_dssp TCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred CCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCC
Confidence 5788888777777888777 68999999999999999998753
No 4
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=4.8e-43 Score=315.22 Aligned_cols=256 Identities=20% Similarity=0.209 Sum_probs=221.1
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504 21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF 100 (396)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh 100 (396)
..|.||||.|+..|+.+++++|++. +.+++...+..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||
T Consensus 3 ~~g~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~ 77 (285)
T 1wdy_A 3 VEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--ADP--VLRKKNGATPFL 77 (285)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCCHHH
T ss_pred cccchHHHHHHHcCCHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCC--cccCCCCCCHHH
Confidence 4689999999999999999999986 78888776888999999999999999999999998 776 889999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhH
Q 037504 101 YAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETA 179 (396)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~ 179 (396)
+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.++ .+........ .......+.||
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~---~~~~~~~g~t~ 151 (285)
T 1wdy_A 78 LAAIAGSVKLLKLFLSKGAD---VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKED---QERLRKGGATA 151 (285)
T ss_dssp HHHHHTCHHHHHHHHHTTCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHH---HHHTTCCCCCH
T ss_pred HHHHcCCHHHHHHHHHcCCC---CCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHH---HHhhccCCCcH
Confidence 99999999999999999999 55567799999999999999999999999988 3333111100 01112234899
Q ss_pred HHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCc----HH
Q 037504 180 LHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRM----RE 255 (396)
Q Consensus 180 L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~----~~ 255 (396)
||+|+..+ ..+++++++ ...+.+++..|..|+||||+|+..++ .+
T Consensus 152 L~~A~~~~---------------------------~~~~v~~Ll----~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 200 (285)
T 1wdy_A 152 LMDAAEKG---------------------------HVEVLKILL----DEMGADVNACDNMGRNALIHALLSSDDSDVEA 200 (285)
T ss_dssp HHHHHHHT---------------------------CHHHHHHHH----HTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHH
T ss_pred HHHHHHcC---------------------------CHHHHHHHH----HhcCCCCCccCCCCCCHHHHHHHccccchHHH
Confidence 99999988 356666665 34688899999999999999999999 89
Q ss_pred HHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhc-chhhhhhhcCCCCCch
Q 037504 256 IFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVV-PRKFAEEKNNDGLTPG 334 (396)
Q Consensus 256 ~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~-~~~~~~~~~~~g~tpl 334 (396)
++++|+++|++ ++.+|..|+||||+|+..|+.+++++| +. .+++++.+|..|+|||
T Consensus 201 i~~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~~g~~~~~~~~~g~t~l 257 (285)
T 1wdy_A 201 ITHLLLDHGAD----VNVRGERGKTPLILAVEKKHLGLVQRL-------------------LEQEHIEINDTDSDGKTAL 257 (285)
T ss_dssp HHHHHHHTTCC----SSCCCTTSCCHHHHHHHTTCHHHHHHH-------------------HHSSSCCTTCCCTTSCCHH
T ss_pred HHHHHHHcCCC----CCCcCCCCCcHHHHHHHcCCHHHHHHH-------------------HhccCCCccccCCCCCcHH
Confidence 99999999999 889999999999999999998888776 55 7899999999999999
Q ss_pred hhHHHHh
Q 037504 335 DLFIKEH 341 (396)
Q Consensus 335 ~~a~~~~ 341 (396)
++|.+..
T Consensus 258 ~~A~~~~ 264 (285)
T 1wdy_A 258 LLAVELK 264 (285)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998753
No 5
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=309.58 Aligned_cols=245 Identities=17% Similarity=0.153 Sum_probs=208.8
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY 101 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~ 101 (396)
+|.||||+|+..|+.+++++|++. |.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~ 75 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ-GWAVNII-TADHVSPLHEACLGGHLSCVKILLKHG--AQV--NGVTADWHTPLFN 75 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHH
Confidence 589999999999999999999986 8999988 999999999999999999999999998 776 9999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHH
Q 037504 102 AAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETAL 180 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L 180 (396)
|+..|+.+++++|+++|++++. +..|.||||+|+..|+.+++++|++.++ .+..+..| .|||
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~----~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-------------~t~L 138 (261)
T 2xai_A 76 ACVSGSWDCVNLLLQHGASVQP----ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL-------------GTPL 138 (261)
T ss_dssp HHHHTCHHHHHHHHHTTCCSSC----SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTT-------------BCHH
T ss_pred HHHcCCHHHHHHHHHCCCCCCC----CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCC-------------CCHH
Confidence 9999999999999999999542 4469999999999999999999999998 55566666 8999
Q ss_pred HHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHH
Q 037504 181 HVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFI 260 (396)
Q Consensus 181 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 260 (396)
|+|+..+ ..++++.+++. +.+++. +..|+||||+|++.|+.+++++|
T Consensus 139 ~~A~~~~---------------------------~~~~v~~Ll~~-----g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~L 185 (261)
T 2xai_A 139 YLACENQ---------------------------QRACVKKLLES-----GADVNQ-GKGQDSPLHAVARTASEELACLL 185 (261)
T ss_dssp HHHHHTT---------------------------CHHHHHHHHHH-----TCCTTC-CBTTBCHHHHHHHHTCHHHHHHH
T ss_pred HHHHHhC---------------------------CHHHHHHHHHc-----CCCCCC-CCCCCChHHHHHHcCCHHHHHHH
Confidence 9999988 36777777653 666774 88999999999999999999999
Q ss_pred HhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504 261 FEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK 339 (396)
Q Consensus 261 l~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~ 339 (396)
+++|++ ++.+|.+|+||||+|+..+. ++++|... .....+.+..+++.+|..|+||++++.+
T Consensus 186 l~~gad----~~~~d~~g~tpl~~A~~~~~--~~~~ll~~-----------~~~~~l~~~~~~~~r~~~g~t~l~~~~~ 247 (261)
T 2xai_A 186 MDFGAD----TQAKNAEGKRPVELVPPESP--LAQLFLER-----------EGPPSLMQLCRLRIRKCFGIQQHHKITK 247 (261)
T ss_dssp HHTTCC----TTCCCTTSCCGGGGSCTTCT--HHHHHHHC------------CCCCHHHHHHHHHHTTSCTTCGGGGGG
T ss_pred HHcCCC----CCCcCCCCCChhhhcccccc--HHHHHHhc-----------cCCccHHHHHHHHHHHHhchhccccCcc
Confidence 999999 88999999999999996654 44443110 0011122346788999999999999865
No 6
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.9e-43 Score=315.72 Aligned_cols=244 Identities=16% Similarity=0.118 Sum_probs=190.8
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCc----------cccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccch
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHK----------DEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDL 88 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~----------~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~ 88 (396)
....|.|+||+|+..|+.+.+..++...+ ..++.. |..|+||||+|+..|+.+++++|++.| .++
T Consensus 11 ~~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~g~t~L~~Aa~~g~~~~v~~Ll~~g--~~~-- 85 (285)
T 3d9h_A 11 SSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSDWSPMHEAAIHGHQLSLRNLISQG--WAV-- 85 (285)
T ss_dssp -------------------------------CCSEECCCCTTCSS-SCCSCCHHHHHHHTTCHHHHHHHHHTT--CCS--
T ss_pred cchHHHHHHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCC-CccCCCHHHHHHHcCCHHHHHHHHHCC--CCC--
Confidence 45678999999999999888888765422 223444 889999999999999999999999998 776
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHH
Q 037504 89 AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLV 168 (396)
Q Consensus 89 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~ 168 (396)
+.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++....+.+|
T Consensus 86 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g----- 157 (285)
T 3d9h_A 86 NIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL----- 157 (285)
T ss_dssp CEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCTT-----
T ss_pred CCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCCC-----
Confidence 99999999999999999999999999999999 5666779999999999999999999999998832233335
Q ss_pred HHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHH
Q 037504 169 KLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIA 248 (396)
Q Consensus 169 ~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A 248 (396)
.||||+|+..| ..++++++++ .+.+++.+|..|+||||+|
T Consensus 158 --------~t~L~~A~~~g---------------------------~~~~v~~Ll~-----~g~~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 158 --------ASPIHEAARRG---------------------------HVECVNSLIA-----YGGNIDHKISHLGTPLYLA 197 (285)
T ss_dssp --------SCHHHHHHHHT---------------------------CHHHHHHHHH-----TTCCTTCCBTTTBCHHHHH
T ss_pred --------CCHHHHHHHcC---------------------------CHHHHHHHHH-----CCCCCCCcCCCCCCHHHHH
Confidence 89999999988 3567776654 5778999999999999999
Q ss_pred HHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcC
Q 037504 249 VSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNN 328 (396)
Q Consensus 249 ~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~ 328 (396)
+..|+.+++++|+++|++ ++ .|..|+||||+|+..++.+++++| +..|++++.+|.
T Consensus 198 ~~~~~~~~v~~Ll~~ga~----~~-~~~~g~t~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~d~ 253 (285)
T 3d9h_A 198 CENQQRACVKKLLESGAD----VN-QGKGQDSPLHAVVRTASEELACLL-------------------MDFGADTQAKNA 253 (285)
T ss_dssp HHTTCHHHHHHHHHTTCC----TT-CCBTTBCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCT
T ss_pred HHcCcHHHHHHHHHCCCC----CC-CCCCCCCHHHHHHHcCCHHHHHHH-------------------HHCCCCCCCcCC
Confidence 999999999999999999 66 489999999999999999988887 668999999999
Q ss_pred CCCCchhhHHH
Q 037504 329 DGLTPGDLFIK 339 (396)
Q Consensus 329 ~g~tpl~~a~~ 339 (396)
+|+||+++|.+
T Consensus 254 ~g~t~l~~A~~ 264 (285)
T 3d9h_A 254 EGKRPVELVPP 264 (285)
T ss_dssp TSCCGGGGSCT
T ss_pred CCCCHHHHhcC
Confidence 99999999973
No 7
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=100.00 E-value=2.3e-41 Score=304.24 Aligned_cols=257 Identities=18% Similarity=0.151 Sum_probs=221.6
Q ss_pred CCCCccccccccCCCcc--cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE--EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVK 79 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~--~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 79 (396)
|+.+++++++..+++.. .+..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+++++|++
T Consensus 16 g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 93 (285)
T 1wdy_A 16 EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLR-KKNGATPFLLAAIAGSVKLLKLFLS 93 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 56778888888776544 377799999999999999999999986 8999888 8999999999999999999999999
Q ss_pred HhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCC-------CCCCCcHHHHHHhcCCHHHHHHHHh
Q 037504 80 KMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQD-------DKDRMLPIVGAASLGHTEVVEFLYR 152 (396)
Q Consensus 80 ~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~-------d~~g~tpLh~A~~~~~~~~v~~Ll~ 152 (396)
.| +++ +.+|..|.||||+|+..|+.+++++|+++|++++..... +..|.||||+|+..|+.+++++|++
T Consensus 94 ~g--~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 169 (285)
T 1wdy_A 94 KG--ADV--NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169 (285)
T ss_dssp TT--CCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHH
T ss_pred cC--CCC--CccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 98 776 999999999999999999999999999999996532211 5689999999999999999999998
Q ss_pred h-cc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhC
Q 037504 153 E-TK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKY 230 (396)
Q Consensus 153 ~-~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~ 230 (396)
. +. .+..+..| .||||+|+..++.. ...++++.++ ..
T Consensus 170 ~~~~~~~~~~~~g-------------~t~l~~a~~~~~~~-----------------------~~~~i~~~Ll-----~~ 208 (285)
T 1wdy_A 170 EMGADVNACDNMG-------------RNALIHALLSSDDS-----------------------DVEAITHLLL-----DH 208 (285)
T ss_dssp TSCCCTTCCCTTS-------------CCHHHHHHHCSCTT-----------------------THHHHHHHHH-----HT
T ss_pred hcCCCCCccCCCC-------------CCHHHHHHHccccc-----------------------hHHHHHHHHH-----Hc
Confidence 7 65 45556666 89999999987321 1245555544 46
Q ss_pred CcccccccCCCCcHHHHHHHcCcHHHHHHHHh-hccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHH
Q 037504 231 PDLIWKFDENGHTIFHIAVSNRMREIFKFIFE-ISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELL 309 (396)
Q Consensus 231 ~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~ 309 (396)
+.+++.+|..|+||||+|++.|+.+++++|++ .|++ ++.+|..|+||||+|++.++.+++++|
T Consensus 209 g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~----~~~~~~~g~t~l~~A~~~~~~~i~~~L------------ 272 (285)
T 1wdy_A 209 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKLKKIAELL------------ 272 (285)
T ss_dssp TCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH------------
T ss_pred CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCC----ccccCCCCCcHHHHHHHcCcHHHHHHH------------
Confidence 88899999999999999999999999999999 8998 889999999999999999999988887
Q ss_pred HHHHHhhhcchhhhhhhcC
Q 037504 310 WFQEVKKVVPRKFAEEKNN 328 (396)
Q Consensus 310 ~~~~v~~l~~~~~~~~~~~ 328 (396)
+..|++++.+|.
T Consensus 273 -------l~~Ga~~~~~d~ 284 (285)
T 1wdy_A 273 -------CKRGASTDCGDL 284 (285)
T ss_dssp -------HHHSSCSCCSSC
T ss_pred -------HHcCCCCCcccc
Confidence 668888888773
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=8.7e-42 Score=302.29 Aligned_cols=223 Identities=19% Similarity=0.150 Sum_probs=172.6
Q ss_pred ccccccchHHHHHHHcC-------------CHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhc
Q 037504 18 EEIRTRRLKLYRVALNG-------------DWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAE 84 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g-------------~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~ 84 (396)
.+|..|.||||+|+..| +.++++.|++. +.+++...|..|.||||+|+..|+.++|++|++.| +
T Consensus 5 ~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~ 81 (253)
T 1yyh_A 5 VRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS--A 81 (253)
T ss_dssp ------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTT--C
T ss_pred CCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-cCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--C
Confidence 36788999999999988 89999999986 77776655899999999999999999999999998 7
Q ss_pred ccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcc
Q 037504 85 NLDLAKRNRIGCTALFYAAASGSVELVKATMEGNE-DITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDD 162 (396)
Q Consensus 85 ~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~ 162 (396)
++ +.+|..|+||||+|+..|+.+++++|+++++ + ++..|..|.||||+|+..|+.+++++|++.++ .+..+..
T Consensus 82 ~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~ 156 (253)
T 1yyh_A 82 DA--NIQDNMGRTPLHAAVSADAQGVFQILIRNRATD---LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 156 (253)
T ss_dssp CT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSC---TTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTT
T ss_pred CC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---ccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCC
Confidence 76 9999999999999999999999999999987 5 56667799999999999999999999999988 5556666
Q ss_pred hhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCC
Q 037504 163 CIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGH 242 (396)
Q Consensus 163 g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~ 242 (396)
| .||||+|+..+ ..++++.|++ .+.+++.+|..|+
T Consensus 157 g-------------~t~L~~A~~~~---------------------------~~~~v~~Ll~-----~ga~~~~~~~~g~ 191 (253)
T 1yyh_A 157 G-------------KSALHWAAAVN---------------------------NVDAAVVLLK-----NGANKDMQNNREE 191 (253)
T ss_dssp S-------------CBHHHHHHHHT---------------------------CHHHHHHHHH-----TTCCTTCCCTTSC
T ss_pred C-------------CCHHHHHHHcC---------------------------CHHHHHHHHH-----cCCCCCCcCCCCC
Confidence 6 89999999988 3667776654 5888999999999
Q ss_pred cHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 243 TIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 243 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|++.|+.+++.+|
T Consensus 192 tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~d~~g~tpl~~A~~~g~~~i~~~l 242 (253)
T 1yyh_A 192 TPLFLAAREGSYETAKVLLDHFAN----RDITDHMDRLPRDIAQERMHHDIVRLL 242 (253)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred CHHHHHHHCCCHHHHHHHHHcCCC----ccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 999999999999999999999999 889999999999999999999988877
No 9
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=4.7e-41 Score=295.05 Aligned_cols=226 Identities=17% Similarity=0.141 Sum_probs=199.3
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHH---hCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCC
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYD---EHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRI 94 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~---~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~ 94 (396)
..|..|.||||+|+..|+.+++++|++ ..+.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~ 78 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAG--ASP--MALDRH 78 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTT
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcC--CCc--cccCCC
Confidence 467889999999999999999999997 468889888 999999999999999999999999998 776 889999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCc-cccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCC-cchhHHHHHHh
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDIT-MVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKD-DDCIELLVKLI 171 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~-~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~-~~g~~~l~~~~ 171 (396)
|.||||+|+..|+.+++++|++.++... .++..|..|.||||+|+..|+.+++++|++.++ .+..+ ..|
T Consensus 79 g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g-------- 150 (241)
T 1k1a_A 79 GQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSG-------- 150 (241)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTC--------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCC--------
Confidence 9999999999999999999999987210 155667799999999999999999999999998 33333 455
Q ss_pred hccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHc
Q 037504 172 ETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSN 251 (396)
Q Consensus 172 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~ 251 (396)
.||||+|+..+ ..++++.+++ .+.+++.+|..|+||||+|+..
T Consensus 151 -----~t~L~~A~~~~---------------------------~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 151 -----RSPLIHAVENN---------------------------SLSMVQLLLQ-----HGANVNAQMYSGSSALHSASGR 193 (241)
T ss_dssp -----CCHHHHHHHTT---------------------------CHHHHHHHHH-----TTCCTTCBCTTSCBHHHHHHHH
T ss_pred -----CcHHHHHHHcC---------------------------CHHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHc
Confidence 89999999988 3677776664 5788999999999999999999
Q ss_pred CcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 252 RMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 252 ~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
|+.+++++|+++|++ ++.+|..|+||||+|+..|+.++++.|
T Consensus 194 ~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~i~~~l 235 (241)
T 1k1a_A 194 GLLPLVRTLVRSGAD----SSLKNCHNDTPLMVARSRRVIDILRGK 235 (241)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCTTTTCSSHHHHHHHTC-
T ss_pred CCHHHHHHHHhcCCC----CCCcCCCCCCHHHHHHhcCcHHHHhhh
Confidence 999999999999999 889999999999999999998888876
No 10
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=7.4e-42 Score=319.03 Aligned_cols=252 Identities=16% Similarity=0.071 Sum_probs=212.9
Q ss_pred cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCC
Q 037504 17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGC 96 (396)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~ 96 (396)
...|..|.||||+||..|+.++|++|++. |++++.. |..|.||||+|+..|+.++|++|++.| +++ .+..|.
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~----~~~~g~ 85 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIET-GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVG--EVH----SLWHGQ 85 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHC--CCC----CCBTTB
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCC--CCc----cccCCC
Confidence 44688899999999999999999999986 8999988 999999999999999999999999998 544 335799
Q ss_pred cHHHHHHHcCCHHHHHHHHhc----CCCCcc--------------ccCCCCCCCcHHHHHHhcC--CHHHHHHHHhhcc-
Q 037504 97 TALFYAAASGSVELVKATMEG----NEDITM--------------VPQDDKDRMLPIVGAASLG--HTEVVEFLYRETK- 155 (396)
Q Consensus 97 tpLh~A~~~g~~~~v~~Ll~~----g~~~~~--------------~~~~d~~g~tpLh~A~~~~--~~~~v~~Ll~~~~- 155 (396)
||||+|+..|+.+++++|++. |++++. ++..|..|.||||+|+..| +.+++++|++.++
T Consensus 86 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~ 165 (364)
T 3ljn_A 86 KPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS 165 (364)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC
Confidence 999999999999999999999 776432 0115668999999999999 9999999999998
Q ss_pred cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 037504 156 NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIW 235 (396)
Q Consensus 156 ~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~ 235 (396)
.+..+..| .||||+|+..| ..+++++|++......+..++
T Consensus 166 ~~~~d~~g-------------~t~L~~A~~~g---------------------------~~~~v~~Ll~~g~~~~~~~~~ 205 (364)
T 3ljn_A 166 PTAKDKAD-------------ETPLMRAMEFR---------------------------NREALDLMMDTVPSKSSLRLD 205 (364)
T ss_dssp TTCCCTTS-------------CCHHHHHHHTT---------------------------CHHHHHHHHHHCSCSSSCCTT
T ss_pred CcccCCCC-------------CCHHHHHHHcC---------------------------CHHHHHHHHhccccccccccc
Confidence 56666677 89999999998 367777777642212223389
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHh
Q 037504 236 KFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVK 315 (396)
Q Consensus 236 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~ 315 (396)
..|..|+||||+|+..|+.+++++|+++|++ +|.+|..|+||||+|+..|+.+++++|
T Consensus 206 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad----~~~~d~~g~tpL~~A~~~g~~~~v~~L------------------ 263 (364)
T 3ljn_A 206 YANKQGNSHLHWAILINWEDVAMRFVEMGID----VNMEDNEHTVPLYLSVRAAMVLLTKEL------------------ 263 (364)
T ss_dssp CCCTTCCCTTHHHHTTTCHHHHHHHHTTTCC----TTCCCTTSCCHHHHHHHTCCHHHHHHH------------------
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHHHhChHHHHHHH------------------
Confidence 9999999999999999999999999999999 899999999999999999999999887
Q ss_pred hhcchhhhh------------hhcCCCCCchhhHHH
Q 037504 316 KVVPRKFAE------------EKNNDGLTPGDLFIK 339 (396)
Q Consensus 316 ~l~~~~~~~------------~~~~~g~tpl~~a~~ 339 (396)
+..+++++ ..+..|+||+..|..
T Consensus 264 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~ 298 (364)
T 3ljn_A 264 -LQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAA 298 (364)
T ss_dssp -HHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSC
T ss_pred -HHcCCchhhhcCcccCcccccccccccccchhhhh
Confidence 33343332 367788999987764
No 11
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.2e-41 Score=303.14 Aligned_cols=249 Identities=17% Similarity=0.090 Sum_probs=181.2
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccc---cccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCC
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDE---IGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIG 95 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~---~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g 95 (396)
.+..|.||||+|+..|+.++|++|++. +.+ ++.+ +..|+||||+|+..|+.++|++|++.| +++ +.+|..|
T Consensus 5 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~--~~~~~~g 78 (282)
T 1oy3_D 5 VTEDGDTALHLAVIHQHEPFLDFLLGF-SAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAG--AGV--LVAERGG 78 (282)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHH-HTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCS--SCCCTTS
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CCCCCCC
Confidence 578899999999999999999999986 555 7777 899999999999999999999999998 777 8999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCCccc----------cCCCCCCCcHHHHHHhcCCHHHHH-HHHhhcc-cCCCCcch
Q 037504 96 CTALFYAAASGSVELVKATMEGNEDITMV----------PQDDKDRMLPIVGAASLGHTEVVE-FLYRETK-NSLKDDDC 163 (396)
Q Consensus 96 ~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~----------~~~d~~g~tpLh~A~~~~~~~~v~-~Ll~~~~-~~~~~~~g 163 (396)
.||||+|+..|+.+++++|+++|++.... ......+.++++.++..+...... .+...+. .+..+..|
T Consensus 79 ~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 158 (282)
T 1oy3_D 79 HTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG 158 (282)
T ss_dssp CCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred CCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence 99999999999999999999998863211 111224567777776665443333 3333333 34455555
Q ss_pred hHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC-CCC
Q 037504 164 IELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE-NGH 242 (396)
Q Consensus 164 ~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~-~g~ 242 (396)
.||||+|+..| ..+++++|++ .+.+++..+. .|+
T Consensus 159 -------------~t~L~~A~~~g---------------------------~~~~v~~Ll~-----~g~~~~~~~~~~g~ 193 (282)
T 1oy3_D 159 -------------HTPLHVAVIHK---------------------------DAEMVRLLRD-----AGADLNKPEPTCGR 193 (282)
T ss_dssp -------------CCHHHHHHHTT---------------------------CHHHHHHHHH-----HTCCTTCCCTTTCC
T ss_pred -------------cCHHHHHHHcC---------------------------CHHHHHHHHH-----cCCCCCCCCCCCCc
Confidence 89999999988 3677777765 3677888875 499
Q ss_pred cHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhh
Q 037504 243 TIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKF 322 (396)
Q Consensus 243 t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~ 322 (396)
||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++| +.+|++
T Consensus 194 tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~ 250 (282)
T 1oy3_D 194 TPLHLAVEAQAASVLELLLKAGAD----PTARMYGGRTPLGSALLRPNPILARLL-------------------RAHGAP 250 (282)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHTSSCHHHHHHH-------------------HHTTCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCC----CcccccCCCCHHHHHHHcCCcHHHHHH-------------------HHcCCC
Confidence 999999999999999999999999 889999999999999999999988887 778999
Q ss_pred hhhhcCCCCCchhhHHHHh
Q 037504 323 AEEKNNDGLTPGDLFIKEH 341 (396)
Q Consensus 323 ~~~~~~~g~tpl~~a~~~~ 341 (396)
++.+|..|.||+++|....
T Consensus 251 ~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 251 EPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp CCCCC--------------
T ss_pred cCcCCCcccccccccCCcc
Confidence 9999999999999997644
No 12
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=5.1e-41 Score=304.66 Aligned_cols=250 Identities=19% Similarity=0.151 Sum_probs=207.9
Q ss_pred CCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCC
Q 037504 15 PPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRI 94 (396)
Q Consensus 15 ~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~ 94 (396)
.....+..|.||||.||..|+.++|+.|++. |.+++.. |..|.||||+|+..|+.++|++|++.| +++ +.+|..
T Consensus 32 ~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~--~~~~~~ 105 (299)
T 1s70_B 32 KKTKVKFDDGAVFLAACSSGDTEEVLRLLER-GADINYA-NVDGLTALHQACIDDNVDMVKFLVENG--ANI--NQPDNE 105 (299)
T ss_dssp SCCCCEECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTT
T ss_pred cccccccCCccHHHHHHHcCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCC
Confidence 3444577889999999999999999999986 8999988 999999999999999999999999998 776 999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhcc
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETD 174 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~ 174 (396)
|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..++.+++++++............
T Consensus 106 g~tpL~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~----------- 171 (299)
T 1s70_B 106 GWIPLHAAASCGYLDIAEYLISQGAH---VGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARK----------- 171 (299)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHH-----------
T ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhh-----------
Confidence 99999999999999999999999999 5566779999999999999999999998765422110000
Q ss_pred chhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcH
Q 037504 175 SYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMR 254 (396)
Q Consensus 175 ~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~ 254 (396)
...+++ ... +..++..........+..|.||||+|+..|+.
T Consensus 172 ~~~~~~-----------------------------------~~~----~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~ 212 (299)
T 1s70_B 172 EEERIM-----------------------------------LRD----ARQWLNSGHINDVRHAKSGGTALHVAAAKGYT 212 (299)
T ss_dssp HHHHHH-----------------------------------HHH----HHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCH
T ss_pred hhhhHH-----------------------------------HHH----HHHHHhccCcchhhhcCCCCCHHHHHHHCCcH
Confidence 001111 111 12223444555556678999999999999999
Q ss_pred HHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCch
Q 037504 255 EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPG 334 (396)
Q Consensus 255 ~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl 334 (396)
+++++|+++|++ +|.+|..|+||||+|+..|+.+++++| +..|++++.+|..|+||+
T Consensus 213 ~~v~~Ll~~g~d----~~~~d~~g~tpL~~A~~~~~~~~v~~L-------------------l~~gad~~~~d~~g~t~l 269 (299)
T 1s70_B 213 EVLKLLIQARYD----VNIKDYDGWTPLHAAAHWGKEEACRIL-------------------VENLCDMEAVNKVGQTAF 269 (299)
T ss_dssp HHHHHHHTTTCC----TTCCCTTCCCHHHHHHHTTCHHHHHHH-------------------HHTTCCTTCCCTTSCCTT
T ss_pred HHHHHHHHcCCC----CCCcCCCCCcHHHHHHhcCCHHHHHHH-------------------HHcCCCCCCcCCCCCCHH
Confidence 999999999999 889999999999999999999988887 678999999999999999
Q ss_pred hhHHHHhHHHHH
Q 037504 335 DLFIKEHEELKK 346 (396)
Q Consensus 335 ~~a~~~~~~~~~ 346 (396)
++|.+...+...
T Consensus 270 ~~A~~~~~~~l~ 281 (299)
T 1s70_B 270 DVADEDILGYLE 281 (299)
T ss_dssp TSCCSGGGHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999765444433
No 13
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=3.8e-41 Score=315.01 Aligned_cols=239 Identities=19% Similarity=0.170 Sum_probs=206.5
Q ss_pred CCCccccccccCCCcccccccchHHHHHHHcCCHHHHHHHHH-------hCccccccccCCCCchHHHHHHHcCCHHHHH
Q 037504 3 HSAPLELHVYSNPPVEEIRTRRLKLYRVALNGDWARAKVIYD-------EHKDEIGDVITRLGDTALHVAAAANRIDFVK 75 (396)
Q Consensus 3 h~~~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~-------~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~ 75 (396)
+..+++++...+.+...+..|.||||+|+..|+.++++.|+. +.|++++.. |..|.||||+|+..|+.++|+
T Consensus 105 ~~~~~~~L~~~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~~-d~~g~TpL~~A~~~g~~~iv~ 183 (373)
T 2fo1_E 105 SYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAM-DCDENTPLMLAVLARRRRLVA 183 (373)
T ss_dssp SSCCCSCCSTTTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCC-CTTSCCHHHHHHHHTCHHHHH
T ss_pred CchHHHHhccccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcCC-CCCCCCHHHHHHHcChHHHHH
Confidence 345667776655555555789999999999999988887773 468999988 999999999999999999999
Q ss_pred HHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcC---CCCccccCCCCCCCcHHHHHHhcC---CHHHHHH
Q 037504 76 KLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGN---EDITMVPQDDKDRMLPIVGAASLG---HTEVVEF 149 (396)
Q Consensus 76 ~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g---~~~~~~~~~d~~g~tpLh~A~~~~---~~~~v~~ 149 (396)
+|++.| +++ +.+|..|.||||+|+..|+.+++++|++++ ++ ++..|..|.||||+|+..+ +.+++++
T Consensus 184 ~Ll~~g--a~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~---~~~~d~~g~t~L~~A~~~~~~~~~~~v~~ 256 (373)
T 2fo1_E 184 YLMKAG--ADP--TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGD---IEELDRNGMTALMIVAHNEGRDQVASAKL 256 (373)
T ss_dssp HHHHTT--CCS--CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHT---TSCCCTTSCCHHHHHHHSCSTTHHHHHHH
T ss_pred HHHHCC--CCC--cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccC---hhhcCCCCCCHHHHHHHhCCcchHHHHHH
Confidence 999998 776 889999999999999999999999999988 56 5666779999999999988 8999999
Q ss_pred HHhhcc-cCC--------CCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHH
Q 037504 150 LYRETK-NSL--------KDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVE 220 (396)
Q Consensus 150 Ll~~~~-~~~--------~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (396)
|++.++ .+. .+..| .||||+|+..| ..++++
T Consensus 257 Ll~~g~~~~~~~~~~~~~~d~~g-------------~t~Lh~A~~~g---------------------------~~~~v~ 296 (373)
T 2fo1_E 257 LVEKGAKVDYDGAARKDSEKYKG-------------RTALHYAAQVS---------------------------NMPIVK 296 (373)
T ss_dssp HHHHTCCSSCCSGGGTSSSSCCC-------------CCTHHHHHSSC---------------------------CHHHHH
T ss_pred HHHCCCCcccccccccCcccccC-------------CCHHHHHHHhC---------------------------CHHHHH
Confidence 999988 332 22344 89999999998 367777
Q ss_pred HHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 221 LLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 221 ~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
+|++ ..+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|
T Consensus 297 ~Ll~----~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad----~~~~d~~g~t~l~~A~~~g~~~iv~~L 365 (373)
T 2fo1_E 297 YLVG----EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----VEAVDATDHTARQLAQANNHHNIVDIF 365 (373)
T ss_dssp HHHH----HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----SSCCCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred HHHH----hcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccCCCCCCCCHHHHHHHcCCHHHHHHH
Confidence 7664 46688999999999999999999999999999999999 889999999999999999999988887
No 14
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=100.00 E-value=4.5e-42 Score=321.30 Aligned_cols=248 Identities=19% Similarity=0.154 Sum_probs=207.8
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHH--------HHhhhcccchh
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLV--------KKMKAENLDLA 89 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll--------~~~~~~~~d~~ 89 (396)
..+..|.||||+|+..|. ++++.|+. .+++...+..|+||||+|+..|+.+++++|+ +.| +++ +
T Consensus 89 ~~~~~g~t~L~~Aa~~~~-~~~~~L~~---~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~g--a~v--n 160 (373)
T 2fo1_E 89 EPEPESPIKLHTEAAGSY-AITEPITR---ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAG--ADV--N 160 (373)
T ss_dssp -----CCCHHHHHHHSSS-CCCSCCST---TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTC--CCT--T
T ss_pred CCCCCCccHHHHHhcCCc-hHHHHhcc---ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcC--CCC--c
Confidence 568889999999999654 67776653 4677773379999999999999998888877 455 555 9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhc---c-cCCCCcchhH
Q 037504 90 KRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRET---K-NSLKDDDCIE 165 (396)
Q Consensus 90 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~---~-~~~~~~~g~~ 165 (396)
.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.+ . .+..+..|
T Consensus 161 ~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g-- 235 (373)
T 2fo1_E 161 AMDCDENTPLMLAVLARRRRLVAYLMKAGAD---PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNG-- 235 (373)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTS--
T ss_pred CCCCCCCCHHHHHHHcChHHHHHHHHHCCCC---CcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCC--
Confidence 9999999999999999999999999999999 5566779999999999999999999999987 3 44556666
Q ss_pred HHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccccc--------c
Q 037504 166 LLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWK--------F 237 (396)
Q Consensus 166 ~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~--------~ 237 (396)
.||||+|+..+ .....++++.+++. +.+++. .
T Consensus 236 -----------~t~L~~A~~~~------------------------~~~~~~~v~~Ll~~-----g~~~~~~~~~~~~~~ 275 (373)
T 2fo1_E 236 -----------MTALMIVAHNE------------------------GRDQVASAKLLVEK-----GAKVDYDGAARKDSE 275 (373)
T ss_dssp -----------CCHHHHHHHSC------------------------STTHHHHHHHHHHH-----TCCSSCCSGGGTSSS
T ss_pred -----------CCHHHHHHHhC------------------------CcchHHHHHHHHHC-----CCCcccccccccCcc
Confidence 89999999876 22246777777754 445554 6
Q ss_pred cCCCCcHHHHHHHcCcHHHHHHHHhhc-cccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhh
Q 037504 238 DENGHTIFHIAVSNRMREIFKFIFEIS-SVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKK 316 (396)
Q Consensus 238 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~ 316 (396)
|..|+||||+|+..|+.+++++|++++ ++ +|.+|..|+||||+|+..|+.+++++|
T Consensus 276 d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~n~~d~~g~TpL~~A~~~g~~~iv~~L------------------- 332 (373)
T 2fo1_E 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSN----KDKQDEDGKTPIMLAAQEGRIEVVMYL------------------- 332 (373)
T ss_dssp SCCCCCTHHHHHSSCCHHHHHHHHHHSCCC----TTCCCTTCCCHHHHHHHHTCHHHHHHH-------------------
T ss_pred cccCCCHHHHHHHhCCHHHHHHHHHhcCCC----ccCcCCCCCCHHHHHHHcCCHHHHHHH-------------------
Confidence 779999999999999999999999886 88 899999999999999999999988887
Q ss_pred hcchhhhhhhcCCCCCchhhHHHHh
Q 037504 317 VVPRKFAEEKNNDGLTPGDLFIKEH 341 (396)
Q Consensus 317 l~~~~~~~~~~~~g~tpl~~a~~~~ 341 (396)
+..|++++.+|..|+|||++|.+..
T Consensus 333 l~~gad~~~~d~~g~t~l~~A~~~g 357 (373)
T 2fo1_E 333 IQQGASVEAVDATDHTARQLAQANN 357 (373)
T ss_dssp HHTTCCSSCCCSSSCCHHHHHHHTT
T ss_pred HHcCCCccCCCCCCCCHHHHHHHcC
Confidence 6789999999999999999998753
No 15
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.7e-40 Score=289.69 Aligned_cols=220 Identities=23% Similarity=0.233 Sum_probs=198.5
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504 21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF 100 (396)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh 100 (396)
..+.+|||.|+..|+.+.++++++..+..++.. +..|.||||+|+..|+.+++++|++.| .++ +.+|..|.||||
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~ 78 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILADKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLG--VPV--NDKDDAGWSPLH 78 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCS--CCCCTTSCCHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHhchhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHhC--CCC--CCcCCCCCCHHH
Confidence 347899999999999999999999877777776 999999999999999999999999998 766 899999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhH
Q 037504 101 YAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETA 179 (396)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~ 179 (396)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.+. .+..+..| .||
T Consensus 79 ~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-------------~t~ 142 (231)
T 3aji_A 79 IAASAGXDEIVKALLVKGAH---VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYD-------------ATA 142 (231)
T ss_dssp HHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-------------CCH
T ss_pred HHHHcCHHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-------------CcH
Confidence 99999999999999999999 55667799999999999999999999999988 55556666 899
Q ss_pred HHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHH
Q 037504 180 LHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKF 259 (396)
Q Consensus 180 L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~ 259 (396)
||+|+..+ ..++++.+++ .+.+++.+|..|+||||+|+..|+.+++++
T Consensus 143 L~~A~~~~---------------------------~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~ 190 (231)
T 3aji_A 143 MHRAAAKG---------------------------NLKMVHILLF-----YKASTNIQDTEGNTPLHLACDEERVEEAKF 190 (231)
T ss_dssp HHHHHHHT---------------------------CHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHHcC---------------------------CHHHHHHHHh-----cCCCccccCCCCCCHHHHHHHCCCHHHHHH
Confidence 99999988 3677776654 678899999999999999999999999999
Q ss_pred HHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 260 IFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 260 Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
|+++|++ ++.+|..|.||||+|+..++.+++++|
T Consensus 191 Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~i~~lL 224 (231)
T 3aji_A 191 LVTQGAS----IYIENKEEKTPLQVAKGGLGLILKRLA 224 (231)
T ss_dssp HHHTTCC----SCCCCTTSCCHHHHSCHHHHHHHHHHH
T ss_pred HHHCCCC----CCCCCCCCCCHHHHHHhhHHHHHHHHH
Confidence 9999999 889999999999999998887776665
No 16
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.6e-40 Score=296.31 Aligned_cols=223 Identities=19% Similarity=0.188 Sum_probs=197.3
Q ss_pred cCCCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc
Q 037504 13 SNPPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN 92 (396)
Q Consensus 13 ~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d 92 (396)
..+...++..|.||||+|+..|+.++++.|++. +.+++.+ |..|.||||+|+..|+.+++++|++.| +++ +.+|
T Consensus 49 ~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--a~~--~~~~ 122 (285)
T 3d9h_A 49 SNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNII-TADHVSPLHEACLGGHLSCVKILLKHG--AQV--NGVT 122 (285)
T ss_dssp CCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHTT--CCS--SCCC
T ss_pred hCcccCCCccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCC--CCC--CCCC
Confidence 344456788999999999999999999999986 8999988 999999999999999999999999998 776 9999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHh
Q 037504 93 RIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLI 171 (396)
Q Consensus 93 ~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~ 171 (396)
..|.||||+|+..|+.+++++|+++|++++ . +..|.||||+|+..|+.+++++|++.++ .+..+..|
T Consensus 123 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~---~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g-------- 190 (285)
T 3d9h_A 123 ADWHTPLFNACVSGSWDCVNLLLQHGASVQ---P-ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHL-------- 190 (285)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHHTTCCSS---C-SCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTT--------
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHHCCCCCC---C-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCC--------
Confidence 999999999999999999999999999854 2 3469999999999999999999999998 55566666
Q ss_pred hccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHc
Q 037504 172 ETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSN 251 (396)
Q Consensus 172 ~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~ 251 (396)
.||||+|+..+ ..++++.|++ .+.+++. |..|+||||+|+..
T Consensus 191 -----~t~L~~A~~~~---------------------------~~~~v~~Ll~-----~ga~~~~-~~~g~t~L~~A~~~ 232 (285)
T 3d9h_A 191 -----GTPLYLACENQ---------------------------QRACVKKLLE-----SGADVNQ-GKGQDSPLHAVVRT 232 (285)
T ss_dssp -----BCHHHHHHHTT---------------------------CHHHHHHHHH-----TTCCTTC-CBTTBCHHHHHHHT
T ss_pred -----CCHHHHHHHcC---------------------------cHHHHHHHHH-----CCCCCCC-CCCCCCHHHHHHHc
Confidence 89999999998 3677777664 4677774 88999999999999
Q ss_pred CcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 252 RMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 252 ~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
|+.+++++|+++|++ ++.+|.+|+||||+|+. +.+++++|
T Consensus 233 ~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~--~~~~~~~L 272 (285)
T 3d9h_A 233 ASEELACLLMDFGAD----TQAKNAEGKRPVELVPP--ESPLAQLF 272 (285)
T ss_dssp TCHHHHHHHHHTTCC----TTCCCTTSCCGGGGSCT--TSHHHHHH
T ss_pred CCHHHHHHHHHCCCC----CCCcCCCCCCHHHHhcC--ccHHHHHH
Confidence 999999999999999 88999999999999994 34555554
No 17
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=3.7e-40 Score=288.74 Aligned_cols=216 Identities=22% Similarity=0.273 Sum_probs=196.3
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
++..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||
T Consensus 7 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~ 80 (237)
T 3b7b_A 7 EHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKAG--ALV--DPKDAEGSTC 80 (237)
T ss_dssp SSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTT--CCC--CCCCTTSCCH
T ss_pred ccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhCC--CCC--CCCCCCCCcH
Confidence 577899999999999999999999986 8999888 899999999999999999999999998 776 8899999999
Q ss_pred HHHHHHcCCHHHHHHHHhcC-CCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccch
Q 037504 99 LFYAAASGSVELVKATMEGN-EDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSY 176 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g-~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~ 176 (396)
||+|+..|+.+++++|++.| .+ ++..|..|.||||+|+..|+.+++++|++.++ .+..+..|
T Consensus 81 L~~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g------------- 144 (237)
T 3b7b_A 81 LHLAAKKGHYEVVQYLLSNGQMD---VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEE------------- 144 (237)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-------------
T ss_pred HHHHHHcCCHHHHHHHHhCCCCC---cccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCC-------------
Confidence 99999999999999999998 55 55667799999999999999999999999998 55566666
Q ss_pred hhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHH
Q 037504 177 ETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREI 256 (396)
Q Consensus 177 ~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~ 256 (396)
.||||+|+..+ ..+++++++ ..+.+++.+|..|.||||+|++.|+.++
T Consensus 145 ~t~L~~A~~~~---------------------------~~~~~~~Ll-----~~g~~~~~~~~~g~t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 145 NICLHWAAFSG---------------------------CVDIAEILL-----AAKCDLHAVNIHGDSPLHIAARENRYDC 192 (237)
T ss_dssp CCHHHHHHHHC---------------------------CHHHHHHHH-----TTTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred CCHHHHHHHCC---------------------------CHHHHHHHH-----HcCCCCCCcCCCCCCHHHHHHHhCCHhH
Confidence 89999999988 356676665 4578899999999999999999999999
Q ss_pred HHHHHhhccccccccccccCCCCchhhhhhcCCCCC
Q 037504 257 FKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLN 292 (396)
Q Consensus 257 v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~ 292 (396)
+++|+++|++ ++.+|+.|+||||+|+..++.+
T Consensus 193 v~~Ll~~gad----~~~~d~~g~t~l~~A~~~~~~~ 224 (237)
T 3b7b_A 193 VVLFLSRDSD----VTLKNKEGETPLQCASLNSQVW 224 (237)
T ss_dssp HHHHHTTTCC----TTCCCTTSCCHHHHSCTTCHHH
T ss_pred HHHHHHcCCC----CCccCCCCCCHHHHHHHHHHHH
Confidence 9999999999 8899999999999999998754
No 18
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=6.1e-40 Score=302.83 Aligned_cols=158 Identities=23% Similarity=0.233 Sum_probs=133.5
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
.+..|.|+||.|++.|+.++|+.||+. |+++|.+.+..|+||||+|+..|+.++|++|+++| +++ +.++..+.+|
T Consensus 21 ~~~~~~t~L~~Av~~g~~~~V~~LL~~-Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~g--a~~--~~~~~~~~~~ 95 (337)
T 4g8k_A 21 AAVEDNHLLIKAVQNEDVDLVQQLLEG-GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHG--ADP--VLRKKNGATP 95 (337)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCCH
T ss_pred CCCCCChHHHHHHHcCCHHHHHHHHHC-CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcC--Cch--hhhccCCCch
Confidence 456689999999999999999999986 89999884556999999999999999999999998 777 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchh
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYE 177 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~ 177 (396)
++.++..+...++..+++.+++ ++..|..|.||||+|+..|+.+++++|++.++ .+......... ......+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~---~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~---~~~~~~g~ 169 (337)
T 4g8k_A 96 FILAAIAGSVKLLKLFLSKGAD---VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQ---ERLRKGGA 169 (337)
T ss_dssp HHHHHHHTCHHHHHHHHTTTCC---TTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC--------CTTCSC
T ss_pred hHHHHhcccchhhHHhhhccch---hhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhcccccc---ccccCCCC
Confidence 9999999999999999999999 55667899999999999999999999999998 33322211100 01122347
Q ss_pred hHHHHHHhcC
Q 037504 178 TALHVLARKN 187 (396)
Q Consensus 178 t~L~~a~~~~ 187 (396)
||||+|++.|
T Consensus 170 T~L~~A~~~g 179 (337)
T 4g8k_A 170 TALMDAAEKG 179 (337)
T ss_dssp CHHHHHHHHT
T ss_pred cHHHHHHHCC
Confidence 9999999988
No 19
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.1e-39 Score=283.92 Aligned_cols=213 Identities=19% Similarity=0.234 Sum_probs=187.9
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhc-ccCCCCcHHHH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAK-RNRIGCTALFY 101 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~-~d~~g~tpLh~ 101 (396)
|.||||+|+..|+.++++.|++..+...+.. |..|.||||+|+..|+.+++++|++.+ ++++++. .|..|.||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKM--ENVNLDDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTC--TTCCGGGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcCccccccC-CCCCCCHHHHHHHcCCHHHHHHHHhcc--ccccccccCCCCCCCHHHH
Confidence 7899999999999999999999854444445 999999999999999999999999998 5565577 89999999999
Q ss_pred HHHcCCHHHHHHHHhcC--CCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhh
Q 037504 102 AAASGSVELVKATMEGN--EDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYET 178 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g--~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t 178 (396)
|+..|+.+++++|+++| ++ ++..|..|.||||+|+..|+.+++++|++.++ .+..+..| .|
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-------------~t 142 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPD---LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFN-------------QI 142 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTS-------------CC
T ss_pred HHHcCCHHHHHHHHhCCCCcc---cccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCC-------------CC
Confidence 99999999999999999 66 66677799999999999999999999999988 55666666 89
Q ss_pred HHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHH
Q 037504 179 ALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFK 258 (396)
Q Consensus 179 ~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~ 258 (396)
|||+|+..+ ..++++.+++ ..+.+++.+|..|+||||+|+..|+.++++
T Consensus 143 ~L~~A~~~~---------------------------~~~~v~~Ll~----~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~ 191 (228)
T 2dzn_A 143 PLHRAASVG---------------------------SLKLIELLCG----LGKSAVNWQDKQGWTPLFHALAEGHGDAAV 191 (228)
T ss_dssp HHHHHHHTT---------------------------CHHHHHHHHT----TTCCCSCCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred HHHHHHHcC---------------------------CHHHHHHHHh----cCcccccCcCCCCCCHHHHHHHcCCHHHHH
Confidence 999999988 3566666653 333889999999999999999999999999
Q ss_pred HHH-hhccccccccccccCCCCchhhhhhcCC
Q 037504 259 FIF-EISSVADLLFDSKDKDGNNILHLAGKLP 289 (396)
Q Consensus 259 ~Ll-~~g~~~~~~~n~~d~~g~TpLh~A~~~~ 289 (396)
+|+ +.|++ ++.+|..|+||||+|+..+
T Consensus 192 ~Ll~~~ga~----~~~~~~~g~t~l~~A~~~~ 219 (228)
T 2dzn_A 192 LLVEKYGAE----YDLVDNKGAKAEDVALNEQ 219 (228)
T ss_dssp HHHHHHCCC----SCCBCTTSCBGGGGCSSTT
T ss_pred HHHHhcCCC----CCccCCCCCcHHHHHHHHH
Confidence 999 89999 8899999999999998764
No 20
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=296.37 Aligned_cols=217 Identities=18% Similarity=0.176 Sum_probs=165.9
Q ss_pred cccccccchHHHHHHHcCCHHHHHHHHHhCcc-------ccccccCCCCchHHHHHHHcCCH-HHHHHHHHHhhhcccch
Q 037504 17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKD-------EIGDVITRLGDTALHVAAAANRI-DFVKKLVKKMKAENLDL 88 (396)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~-------~~~~~~~~~g~t~Lh~A~~~g~~-~~v~~Ll~~~~~~~~d~ 88 (396)
..+|..+.++|+.||..|+.++|+.||+.... .++.. +..|.||||.|+..+.. .++++|++.| +++
T Consensus 5 ~kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~-~~~~~t~L~~a~~~~~~~~~v~~Ll~~G--adv-- 79 (269)
T 4b93_B 5 TKKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAA-DPEFCHPLCQCPKCAPAQKRLAKVPASG--LGV-- 79 (269)
T ss_dssp --CCCHHHHHHHHHHHTTCHHHHHHHHTCC-----------------------------------------CC--CCT--
T ss_pred cccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccccccccc-CccCCCHHHHHHHhCCHHHHHHHHHHCC--CCC--
Confidence 34677889999999999999999999976322 13444 77899999999998876 4889999988 776
Q ss_pred hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHH
Q 037504 89 AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELL 167 (396)
Q Consensus 89 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l 167 (396)
|.+|.+|+||||+|+..|+.+++++|++.|++ +...+..|.||+|+|+..++.+++++|++.++ .+..+..|
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~---~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g---- 152 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKHGAN---AGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSG---- 152 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC---TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTC----
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC---cCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCC----
Confidence 99999999999999999999999999999999 55667799999999999999999999999998 66677777
Q ss_pred HHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHH
Q 037504 168 VKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHI 247 (396)
Q Consensus 168 ~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~ 247 (396)
.||||+|+..|+ .++++.|++ .+.++|.+|..|+||||+
T Consensus 153 ---------~TpL~~A~~~g~---------------------------~~~v~~Ll~-----~gadvn~~~~~g~t~Lh~ 191 (269)
T 4b93_B 153 ---------NTPLIYACSGGH---------------------------HELVALLLQ-----HGASINASNNKGNTALHE 191 (269)
T ss_dssp ---------CCHHHHHHHTTC---------------------------GGGHHHHHH-----TTCCTTCBCTTSCBHHHH
T ss_pred ---------CCHHHHHHHCCC---------------------------HHHHHHHHH-----CCCCCCccccCCCcHHHH
Confidence 899999999983 456666653 688899999999999999
Q ss_pred HHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCC
Q 037504 248 AVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPP 290 (396)
Q Consensus 248 A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~ 290 (396)
|+..|+.++|++|+++|++ +|.+|..|+||||+|+++++
T Consensus 192 A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~~~ 230 (269)
T 4b93_B 192 AVIEKHVFVVELLLLHGAS----VQVLNKRQRTAVDCAEQNSK 230 (269)
T ss_dssp HHHTTCHHHHHHHHHTTCC----SCCCCTTSCCSGGGSCTTCH
T ss_pred HHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHhCCc
Confidence 9999999999999999999 89999999999999998775
No 21
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=1.5e-40 Score=294.41 Aligned_cols=223 Identities=17% Similarity=0.180 Sum_probs=164.1
Q ss_pred ccccccCCCCchHHHHHHHcC-------------CHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHH
Q 037504 49 EIGDVITRLGDTALHVAAAAN-------------RIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATM 115 (396)
Q Consensus 49 ~~~~~~~~~g~t~Lh~A~~~g-------------~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll 115 (396)
++|.+ |.+|+||||+|+..| +.+++++|++.| +++ .+..|..|.||||+|+..|+.+++++|+
T Consensus 2 dvn~~-d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g--~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll 77 (253)
T 1yyh_A 2 DVNVR-GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQG--ASL-HNQTDRTGETALHLAARYSRSDAAKRLL 77 (253)
T ss_dssp ------------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCCC-CCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHcc--CCc-ccccCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 56777 899999999999987 899999999998 655 2346899999999999999999999999
Q ss_pred hcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc--cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCC
Q 037504 116 EGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK--NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQ 193 (396)
Q Consensus 116 ~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~ 193 (396)
++|++ ++.+|..|.||||+|+..|+.+++++|++.++ .+..+..| .||||+|+..++
T Consensus 78 ~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g-------------~t~L~~A~~~~~----- 136 (253)
T 1yyh_A 78 EASAD---ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDG-------------TTPLILAARLAV----- 136 (253)
T ss_dssp HTTCC---TTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTC-------------CCHHHHHHHHTC-----
T ss_pred HcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCC-------------CcHHHHHHHcCh-----
Confidence 99999 55667799999999999999999999999987 34455566 899999999883
Q ss_pred CCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcccccccccc
Q 037504 194 NPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDS 273 (396)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~ 273 (396)
.++++.+++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ ++.
T Consensus 137 ----------------------~~~v~~Ll~-----~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~ 185 (253)
T 1yyh_A 137 ----------------------EGMLEDLIN-----SHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN----KDM 185 (253)
T ss_dssp ----------------------SSHHHHHHH-----TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCC----TTC
T ss_pred ----------------------HHHHHHHHH-----cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCC
Confidence 456665553 5788999999999999999999999999999999999 889
Q ss_pred ccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh-HHHHH
Q 037504 274 KDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH-EELKK 346 (396)
Q Consensus 274 ~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~-~~~~~ 346 (396)
+|..|+||||+|+..|+.+++++| +..|++++.+|..|+||+++|.+.. .++++
T Consensus 186 ~~~~g~tpL~~A~~~~~~~~v~~L-------------------l~~ga~~~~~d~~g~tpl~~A~~~g~~~i~~ 240 (253)
T 1yyh_A 186 QNNREETPLFLAAREGSYETAKVL-------------------LDHFANRDITDHMDRLPRDIAQERMHHDIVR 240 (253)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHH-------------------HHTTCCTTCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHH-------------------HHcCCCccccccCCCCHHHHHHHcCCHHHHH
Confidence 999999999999999999988887 7789999999999999999998754 34443
No 22
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=100.00 E-value=1.3e-39 Score=300.61 Aligned_cols=264 Identities=17% Similarity=0.128 Sum_probs=222.8
Q ss_pred CCCCccccccccCCCcc--cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE--EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVK 79 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~--~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 79 (396)
||.+++++|+..+++.. .+..|.||||+|+..|+.++|+.||+. |++++.+ +..+.+|++.++..+...++..+++
T Consensus 36 g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~-ga~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (337)
T 4g8k_A 36 EDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH-GADPVLR-KKNGATPFILAAIAGSVKLLKLFLS 113 (337)
T ss_dssp TCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHT
T ss_pred CCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHc-CCchhhh-ccCCCchhHHHHhcccchhhHHhhh
Confidence 67888999998887654 445699999999999999999999975 9999988 9999999999999999999999999
Q ss_pred HhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccc-------cCCCCCCCcHHHHHHhcCCHHHHHHHHh
Q 037504 80 KMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMV-------PQDDKDRMLPIVGAASLGHTEVVEFLYR 152 (396)
Q Consensus 80 ~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~-------~~~d~~g~tpLh~A~~~~~~~~v~~Ll~ 152 (396)
.+ .++ +.+|..|.||||+|+..|+.+++++|+++|++++.. ...+..|.||||+|+..|+.+++++|++
T Consensus 114 ~~--~~~--~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~ 189 (337)
T 4g8k_A 114 KG--ADV--NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 189 (337)
T ss_dssp TT--CCT--TCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHH
T ss_pred cc--chh--hhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHh
Confidence 87 666 999999999999999999999999999999986532 1234579999999999999999999997
Q ss_pred h-cc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhC
Q 037504 153 E-TK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKY 230 (396)
Q Consensus 153 ~-~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~ 230 (396)
. ++ .+..+..| .|+++.++..+.. .....+++.| ...
T Consensus 190 ~~gad~n~~d~~g-------------~t~l~~~~~~~~~-----------------------~~~~~i~~lL-----l~~ 228 (337)
T 4g8k_A 190 EMGADVNACDNMG-------------RNALIHALLSSDD-----------------------SDVEAITHLL-----LDH 228 (337)
T ss_dssp HSCCCTTCCCTTS-------------CCHHHHHHHHSCT-----------------------TTHHHHHHHH-----HHT
T ss_pred ccCCCcCccCCCC-------------CcHHHHHHHHcCc-----------------------ccHHHHHHHH-----HHC
Confidence 5 55 55566666 7888877765521 0112333333 457
Q ss_pred CcccccccCCCCcHHHHHHHcCcHHHHHHHHhh-ccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHH
Q 037504 231 PDLIWKFDENGHTIFHIAVSNRMREIFKFIFEI-SSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELL 309 (396)
Q Consensus 231 ~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~-g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~ 309 (396)
+.+++.+|..|+||||+|+..|+.+++++|++. |++ +|.+|.+|+||||+|++.|+.+++++|
T Consensus 229 gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~----vn~~d~~G~TpL~~A~~~g~~~iv~~L------------ 292 (337)
T 4g8k_A 229 GADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE----INDTDSDGKTALLLAVELKLKKIAELL------------ 292 (337)
T ss_dssp TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH------------
T ss_pred CCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCc----ccCcCCCCCCHHHHHHHcCCHHHHHHH------------
Confidence 889999999999999999999999999999985 788 899999999999999999999998887
Q ss_pred HHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504 310 WFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE 340 (396)
Q Consensus 310 ~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~ 340 (396)
+..|++++. .|||++|.+.
T Consensus 293 -------l~~GAd~n~-----~~~L~~A~~~ 311 (337)
T 4g8k_A 293 -------CKRGASTDC-----GDLVMTARRN 311 (337)
T ss_dssp -------HTTSCSSTT-----CCHHHHHHHT
T ss_pred -------HHCCCCCCC-----CCHHHHHHHc
Confidence 778887764 5699999864
No 23
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=1.6e-39 Score=284.62 Aligned_cols=218 Identities=22% Similarity=0.213 Sum_probs=195.7
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCC
Q 037504 49 EIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDD 128 (396)
Q Consensus 49 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d 128 (396)
+++.. |..|.||||+|+..|+.+++++|++.| .++ +..|..|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 3 ~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~ 74 (237)
T 3b7b_A 3 NFKME-HQNKRSPLHAAAEAGHVDICHMLVQAG--ANI--DTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL---VDPKD 74 (237)
T ss_dssp CCCCS-SCCSCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC---CCCCC
T ss_pred Ccccc-cCCCCCHHHHHHHcCcHHHHHHHHHcC--CCc--CccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC---CCCCC
Confidence 44555 899999999999999999999999998 776 89999999999999999999999999999998 55667
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhhcc--cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhcc
Q 037504 129 KDRMLPIVGAASLGHTEVVEFLYRETK--NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLG 206 (396)
Q Consensus 129 ~~g~tpLh~A~~~~~~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~ 206 (396)
..|.||||+|+..|+.+++++|++.+. .+..+..| .||||+|+..+
T Consensus 75 ~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g-------------~t~L~~A~~~~------------------- 122 (237)
T 3b7b_A 75 AEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGG-------------WTPMIWATEYK------------------- 122 (237)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTS-------------CCHHHHHHHTT-------------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC-------------CCHHHHHHHcC-------------------
Confidence 799999999999999999999999985 44455556 89999999988
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhh
Q 037504 207 AKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAG 286 (396)
Q Consensus 207 ~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~ 286 (396)
..++++++++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+
T Consensus 123 --------~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~----~~~~~~~g~t~L~~A~ 185 (237)
T 3b7b_A 123 --------HVDLVKLLLS-----KGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD----LHAVNIHGDSPLHIAA 185 (237)
T ss_dssp --------CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCC----TTCCCTTCCCHHHHHH
T ss_pred --------CHHHHHHHHH-----CCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHH
Confidence 3567776654 5778999999999999999999999999999999999 8899999999999999
Q ss_pred cCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHhH
Q 037504 287 KLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEHE 342 (396)
Q Consensus 287 ~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~~ 342 (396)
..++.+++++| +..|++++.+|+.|+||+++|....+
T Consensus 186 ~~~~~~~v~~L-------------------l~~gad~~~~d~~g~t~l~~A~~~~~ 222 (237)
T 3b7b_A 186 RENRYDCVVLF-------------------LSRDSDVTLKNKEGETPLQCASLNSQ 222 (237)
T ss_dssp HTTCHHHHHHH-------------------HTTTCCTTCCCTTSCCHHHHSCTTCH
T ss_pred HhCCHhHHHHH-------------------HHcCCCCCccCCCCCCHHHHHHHHHH
Confidence 99999988887 77899999999999999999986543
No 24
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=289.23 Aligned_cols=208 Identities=19% Similarity=0.179 Sum_probs=185.7
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHH
Q 037504 57 LGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIV 136 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh 136 (396)
+|+||||+|+..|+.+++++|++.| .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 74 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQG--WAV--NIITADHVSPLHEACLGGHLSCVKILLKHGAQ---VNGVTADWHTPLF 74 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTT--CCS--SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHCC--CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHH
Confidence 5899999999999999999999998 776 99999999999999999999999999999999 5666779999999
Q ss_pred HHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHH
Q 037504 137 GAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERAL 216 (396)
Q Consensus 137 ~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (396)
+|+..|+.+++++|++.++....+.+| .||||+|+..+ ..
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~~~~g-------------~t~L~~A~~~~---------------------------~~ 114 (261)
T 2xai_A 75 NACVSGSWDCVNLLLQHGASVQPESDL-------------ASPIHEAARRG---------------------------HV 114 (261)
T ss_dssp HHHHHTCHHHHHHHHHTTCCSSCSCTT-------------CCHHHHHHHTT---------------------------CH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCC-------------CCHHHHHHHcC---------------------------cH
Confidence 999999999999999999833233445 89999999998 35
Q ss_pred HHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccc
Q 037504 217 ELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNI 296 (396)
Q Consensus 217 ~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~ 296 (396)
++++.+++ .+.+++.+|..|+||||+|+..|+.+++++|+++|++ +|. |..|+||||+|+..++.+++++
T Consensus 115 ~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~-~~~g~t~Lh~A~~~~~~~~v~~ 184 (261)
T 2xai_A 115 ECVNSLIA-----YGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD----VNQ-GKGQDSPLHAVARTASEELACL 184 (261)
T ss_dssp HHHHHHHH-----TTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC----TTC-CBTTBCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHH-----cCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC----CCC-CCCCCChHHHHHHcCCHHHHHH
Confidence 67776654 5788999999999999999999999999999999999 664 8999999999999999988888
Q ss_pred ccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504 297 VSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE 340 (396)
Q Consensus 297 l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~ 340 (396)
| +..|++++.+|.+|+||+++|.+.
T Consensus 185 L-------------------l~~gad~~~~d~~g~tpl~~A~~~ 209 (261)
T 2xai_A 185 L-------------------MDFGADTQAKNAEGKRPVELVPPE 209 (261)
T ss_dssp H-------------------HHTTCCTTCCCTTSCCGGGGSCTT
T ss_pred H-------------------HHcCCCCCCcCCCCCChhhhcccc
Confidence 7 668999999999999999999743
No 25
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=100.00 E-value=2.6e-39 Score=283.91 Aligned_cols=216 Identities=21% Similarity=0.182 Sum_probs=188.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
|.+|+||||+|+..|+.+++++|++.......+++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||
T Consensus 6 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~ 82 (241)
T 1k1a_A 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS---PMALDRHGQTA 82 (241)
T ss_dssp -CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccCCCCCCH
Confidence 899999999999999999999999843222334499999999999999999999999999999999 55567799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcc-----cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchh
Q 037504 135 IVGAASLGHTEVVEFLYRETK-----NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKA 209 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~-----~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
||+|+..|+.+++++|++.++ .+..+..| .||||+|+..+
T Consensus 83 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g-------------~t~L~~A~~~~---------------------- 127 (241)
T 1k1a_A 83 AHLACEHRSPTCLRALLDSAAPGTLDLEARNYDG-------------LTALHVAVNTE---------------------- 127 (241)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTS-------------CCHHHHHHHHT----------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCccccccccCcCC-------------CcHHHHHHHcC----------------------
Confidence 999999999999999999986 22344455 89999999988
Q ss_pred hhhHHHHHHHHHHHHHHHHhCCccccccc-CCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504 210 VENERALELVELLWENFLFKYPDLIWKFD-ENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 210 ~~~~~~~~~~~~ll~~ll~~~~~~i~~~d-~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
..++++++++ .+.+++..+ ..|.||||+|++.|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 128 -----~~~~~~~Ll~-----~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~ 193 (241)
T 1k1a_A 128 -----CQETVQLLLE-----RGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGAN----VNAQMYSGSSALHSASGR 193 (241)
T ss_dssp -----CHHHHHHHHH-----TTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHH
T ss_pred -----CHHHHHHHHH-----cCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHc
Confidence 3677776664 577788888 8899999999999999999999999999 889999999999999999
Q ss_pred CCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504 289 PPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH 341 (396)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~ 341 (396)
|+.+++++| +..|++++.+|..|+||+++|.+..
T Consensus 194 ~~~~~v~~L-------------------l~~ga~~~~~~~~g~tpl~~A~~~~ 227 (241)
T 1k1a_A 194 GLLPLVRTL-------------------VRSGADSSLKNCHNDTPLMVARSRR 227 (241)
T ss_dssp TCHHHHHHH-------------------HHTTCCTTCCCTTSCCTTTTCSSHH
T ss_pred CCHHHHHHH-------------------HhcCCCCCCcCCCCCCHHHHHHhcC
Confidence 999988887 6689999999999999999997644
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.1e-38 Score=275.88 Aligned_cols=210 Identities=20% Similarity=0.218 Sum_probs=185.0
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccC-CCCCCCcHHH
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQ-DDKDRMLPIV 136 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~d~~g~tpLh 136 (396)
|+||||+|+..|+.+++++|++.+ ++. .+.+|..|.||||+|+..|+.+++++|+++|++.+ +.. .|..|.||||
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~~--~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~~g~t~L~ 77 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHSK--PSL-LLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN-LDDYPDDSGWTPFH 77 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHHC--GGG-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC-GGGCCCTTSCCHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhcC--ccc-cccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc-ccccCCCCCCCHHH
Confidence 789999999999999999999998 544 35589999999999999999999999999995544 334 6779999999
Q ss_pred HHHhcCCHHHHHHHHhhc--c-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH
Q 037504 137 GAASLGHTEVVEFLYRET--K-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE 213 (396)
Q Consensus 137 ~A~~~~~~~~v~~Ll~~~--~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (396)
+|+..|+.+++++|++.+ + .+..+..| .||||+|+..+
T Consensus 78 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g-------------~t~L~~A~~~~-------------------------- 118 (228)
T 2dzn_A 78 IACSVGNLEVVKSLYDRPLKPDLNKITNQG-------------VTCLHLAVGKK-------------------------- 118 (228)
T ss_dssp HHHHHCCHHHHHHHHSSSSCCCTTCCCTTC-------------CCHHHHHHHTT--------------------------
T ss_pred HHHHcCCHHHHHHHHhCCCCcccccCCcCC-------------CCHHHHHHHcC--------------------------
Confidence 999999999999999998 4 44455556 89999999988
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhc-cccccccccccCCCCchhhhhhcCCCCC
Q 037504 214 RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEIS-SVADLLFDSKDKDGNNILHLAGKLPPLN 292 (396)
Q Consensus 214 ~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g-~~~~~~~n~~d~~g~TpLh~A~~~~~~~ 292 (396)
..++++++++ .+.+++.+|..|+||||+|+..|+.+++++|++.| ++ ++.+|..|+||||+|+..|+.+
T Consensus 119 -~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~----~~~~d~~g~t~L~~A~~~~~~~ 188 (228)
T 2dzn_A 119 -WFEVSQFLIE-----NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSA----VNWQDKQGWTPLFHALAEGHGD 188 (228)
T ss_dssp -CHHHHHHHHH-----TTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCC----SCCCCTTSCCHHHHHHHTTCHH
T ss_pred -CHhHHHHHHH-----cCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCccc----ccCcCCCCCCHHHHHHHcCCHH
Confidence 3667776654 57889999999999999999999999999999999 88 8899999999999999999988
Q ss_pred ccccccchhHhHHHHHHHHHHHhhh-cchhhhhhhcCCCCCchhhHHH
Q 037504 293 RLNIVSVAALQLQRELLWFQEVKKV-VPRKFAEEKNNDGLTPGDLFIK 339 (396)
Q Consensus 293 ~~~~l~~~~~~~~~~l~~~~~v~~l-~~~~~~~~~~~~g~tpl~~a~~ 339 (396)
++++| + ..|++++.+|.+|+||+++|.+
T Consensus 189 ~v~~L-------------------l~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 189 AAVLL-------------------VEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp HHHHH-------------------HHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred HHHHH-------------------HHhcCCCCCccCCCCCcHHHHHHH
Confidence 88877 5 5799999999999999999964
No 27
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=100.00 E-value=1.1e-37 Score=288.88 Aligned_cols=228 Identities=18% Similarity=0.158 Sum_probs=196.1
Q ss_pred CCCcccccccc-CCC-cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504 3 HSAPLELHVYS-NPP-VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK 80 (396)
Q Consensus 3 h~~~~~~~~~~-~~~-~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 80 (396)
+.+.++.++.. +.+ ...+..|.||||+|+..|+.++|++|++. |.+++.+ |..|.||||+|+..|+.+++++|++.
T Consensus 36 ~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~ 113 (351)
T 3utm_A 36 NEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAK-DKGGLVPLHNACSYGHYEVTELLLKH 113 (351)
T ss_dssp CHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred CHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHC
Confidence 44445445543 333 33678899999999999999999999986 8999988 99999999999999999999999999
Q ss_pred hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCcccc-----------------------------------
Q 037504 81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVP----------------------------------- 125 (396)
Q Consensus 81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~----------------------------------- 125 (396)
| +++ +.+|..|.||||+|+..|+.+++++|+++|++++..+
T Consensus 114 g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (351)
T 3utm_A 114 G--ACV--NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREA 189 (351)
T ss_dssp T--CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C--CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhc
Confidence 8 776 9999999999999999999999999999999865322
Q ss_pred ----------------CCCCCCCcHHHHHHhc---CCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHh
Q 037504 126 ----------------QDDKDRMLPIVGAASL---GHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLAR 185 (396)
Q Consensus 126 ----------------~~d~~g~tpLh~A~~~---~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~ 185 (396)
..+..|.||||+|+.. +..+++++|++.++ .+..+..| .||||+|++
T Consensus 190 ~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g-------------~t~L~~A~~ 256 (351)
T 3utm_A 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDF-------------MTPLHVAAE 256 (351)
T ss_dssp CHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTC-------------CCHHHHHHH
T ss_pred cHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCC-------------CCHHHHHHH
Confidence 2335678999999998 55789999999988 55566666 899999999
Q ss_pred cCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcc
Q 037504 186 KNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISS 265 (396)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~ 265 (396)
.| ..+++++|++ .+.+++.+|..|+||||+|+..|+.+++++|+++|+
T Consensus 257 ~g---------------------------~~~~v~~Ll~-----~ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga 304 (351)
T 3utm_A 257 RA---------------------------HNDVMEVLHK-----HGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGS 304 (351)
T ss_dssp TT---------------------------CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cC---------------------------CHHHHHHHHH-----CCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 98 3577776654 688899999999999999999999999999999999
Q ss_pred ccccccccccCCCCchhhhh
Q 037504 266 VADLLFDSKDKDGNNILHLA 285 (396)
Q Consensus 266 ~~~~~~n~~d~~g~TpLh~A 285 (396)
+ ++.+|..|+||||+|
T Consensus 305 d----~~~~~~~g~tal~~a 320 (351)
T 3utm_A 305 D----PSIISLQGFTAAQMG 320 (351)
T ss_dssp C----TTCCCTTSCCHHHHS
T ss_pred C----CCCcCCCCCChhhhh
Confidence 9 889999999999998
No 28
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.2e-38 Score=285.24 Aligned_cols=224 Identities=15% Similarity=0.118 Sum_probs=194.7
Q ss_pred ccccccccCCCcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcc
Q 037504 6 PLELHVYSNPPVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAEN 85 (396)
Q Consensus 6 ~~~~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~ 85 (396)
+.+++...+ ....+..|.||||+|+..|+.++++.|++. |++++.. +|+||||+|+..|+.+++++|++.| ++
T Consensus 15 v~~lL~~~~-~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~g--a~ 87 (285)
T 3kea_A 15 LKSFLSSKD-TFKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLL---ENEFPLHQAATLEDTKIVKILLFSG--LD 87 (285)
T ss_dssp HHHHHHSTT-TTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTT--CC
T ss_pred HHHHHHhCC-CCccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCC--CC
Confidence 344555443 456788999999999999999999999986 8888876 4999999999999999999999998 77
Q ss_pred cchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCC-CcHHHHHHhcCCHHHHHHHHhhcccCCCCcchh
Q 037504 86 LDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDR-MLPIVGAASLGHTEVVEFLYRETKNSLKDDDCI 164 (396)
Q Consensus 86 ~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g-~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~ 164 (396)
+ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..| .||||+|+..|+.+++++|++.++.......|
T Consensus 88 ~--~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g- 161 (285)
T 3kea_A 88 D--SQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR---LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL- 161 (285)
T ss_dssp T--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGG---GGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCCSTH-
T ss_pred C--CCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC---CCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccccCC-
Confidence 6 89999999999999999999999999999999 55667788 79999999999999999999999833222255
Q ss_pred HHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcH
Q 037504 165 ELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTI 244 (396)
Q Consensus 165 ~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~ 244 (396)
.||||+|+..| ..+++++|++. +.+++.+|..|+||
T Consensus 162 ------------~t~L~~A~~~g---------------------------~~~~v~~Ll~~-----gad~n~~~~~g~t~ 197 (285)
T 3kea_A 162 ------------LSCIHITIKNG---------------------------HVDMMILLLDY-----MTSTNTNNSLLFIP 197 (285)
T ss_dssp ------------HHHHHHHHHTT---------------------------CHHHHHHHHHH-----HHHTCTTCCCBCCT
T ss_pred ------------ccHHHHHHHcC---------------------------hHHHHHHHHHc-----CCCCCcccCCCCCh
Confidence 89999999998 36777777754 66789999999998
Q ss_pred -HHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 245 -FHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 245 -Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
||+|+..|+.+++++|+++|++ ++.+| +.|+..|+.+++++|
T Consensus 198 ~L~~A~~~~~~~~v~~Ll~~gad----~~~~~-------~~a~~~~~~~iv~~L 240 (285)
T 3kea_A 198 DIKLAIDNKDIEMLQALFKYDIN----IYSAN-------LENVLLDDAEIAKMI 240 (285)
T ss_dssp THHHHHHHTCHHHHHHHTTSCBC----STTTT-------GGGGTTTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC----CCCCC-------hhhhhcCCHHHHHHH
Confidence 9999999999999999999999 77777 467888898888887
No 29
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=274.14 Aligned_cols=223 Identities=22% Similarity=0.259 Sum_probs=195.7
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchh-cccCCCC
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLA-KRNRIGC 96 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~-~~d~~g~ 96 (396)
..+..|.|+||.|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++.+ .++ + ..+..|.
T Consensus 4 ~~d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~--~~~~~~~~~ 77 (240)
T 3eu9_A 4 HIDDYSTWDIVKATQYGIYERCRELVEA-GYDVRQP-DKENVTLLHWAAINNRIDLVKYYISKG--AIV--DQLGGDLNS 77 (240)
T ss_dssp CCSCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCBTTTTB
T ss_pred ccccccchHHHHHHHcCChHHHHHHHHc-CCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcC--Ccc--hhhcCCcCC
Confidence 3577899999999999999999999986 8899888 899999999999999999999999998 655 4 3445699
Q ss_pred cHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccc
Q 037504 97 TALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDS 175 (396)
Q Consensus 97 tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~ 175 (396)
||||+|+..|+.+++++|++.|++ ++..|..|.||||+|+..|+.+++++|++.++ ....+..|
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g------------ 142 (240)
T 3eu9_A 78 TPLHWATRQGHLSMVVQLMKYGAD---PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNG------------ 142 (240)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS------------
T ss_pred ChhHHHHHcCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCC------------
Confidence 999999999999999999999999 55567789999999999999999999999988 55566666
Q ss_pred hhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC-CCCcHHHHHHHcCcH
Q 037504 176 YETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE-NGHTIFHIAVSNRMR 254 (396)
Q Consensus 176 ~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~ 254 (396)
.||||+|+..+.. .++++.+ ...+.+++..+. .|+||||+|+..|+.
T Consensus 143 -~t~l~~a~~~~~~--------------------------~~~~~~L-----~~~~~~~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 143 -MTPLMWAAYRTHS--------------------------VDPTRLL-----LTFNVSVNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp -CCHHHHHHHHCCS--------------------------STTHHHH-----HHTTCCTTCCCTTTCCCHHHHHHHHTCH
T ss_pred -CcHHHHHHHhCCh--------------------------HHHHHHH-----HhcCCCcchhhccCCCcHHHHHHHcCCH
Confidence 8999999976632 2333333 456778888886 999999999999999
Q ss_pred HHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 255 EIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 255 ~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
+++++|+++|++ ++.+|..|+||||+|++.|+.+++++|
T Consensus 191 ~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~v~~L 229 (240)
T 3eu9_A 191 TVISLLLEAGAN----VDAQNIKGESALDLAKQRKNVWMINHL 229 (240)
T ss_dssp HHHHHHHHHTCC----TTCBCTTSCBHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 999999999999 889999999999999999999988887
No 30
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=5.4e-38 Score=273.88 Aligned_cols=217 Identities=21% Similarity=0.192 Sum_probs=192.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+..+.||||.|+..|+.+++++|++.+ ... ++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||
T Consensus 3 ~~~~~~~l~~A~~~g~~~~v~~ll~~~--~~~-~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~~~~g~t~ 76 (231)
T 3aji_A 3 GCVSNIMICNLAYSGKLDELKERILAD--KSL-ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP---VNDKDDAGWSP 76 (231)
T ss_dssp CCCSSSHHHHHHHHTCHHHHHHHHHHC--GGG-GGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCH
T ss_pred CccccchHHHHHHhCCHHHHHHHHHhc--hhh-hhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC---CCCcCCCCCCH
Confidence 456899999999999999999999986 332 488899999999999999999999999999998 55667799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH
Q 037504 135 IVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE 213 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (396)
||+|+..|+.+++++|++.++ .+..+..| .||||+|+..+
T Consensus 77 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-------------~t~L~~A~~~~-------------------------- 117 (231)
T 3aji_A 77 LHIAASAGXDEIVKALLVKGAHVNAVNQNG-------------CTPLHYAASKN-------------------------- 117 (231)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-------------CCHHHHHHHTT--------------------------
T ss_pred HHHHHHcCHHHHHHHHHHcCCCCCCCCCCC-------------CCHHHHHHHcC--------------------------
Confidence 999999999999999999988 55566666 89999999988
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCc
Q 037504 214 RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNR 293 (396)
Q Consensus 214 ~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~ 293 (396)
..++++++++ .+.+++.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.++
T Consensus 118 -~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~L~~A~~~~~~~~ 187 (231)
T 3aji_A 118 -RHEIAVMLLE-----GGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS----TNIQDTEGNTPLHLACDEERVEE 187 (231)
T ss_dssp -CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC----SCCCCTTSCCHHHHHHHTTCHHH
T ss_pred -CHHHHHHHHH-----cCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCC----ccccCCCCCCHHHHHHHCCCHHH
Confidence 3567766654 5778899999999999999999999999999999999 88999999999999999999988
Q ss_pred cccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHhHHHH
Q 037504 294 LNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEHEELK 345 (396)
Q Consensus 294 ~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~~~~~ 345 (396)
+++| +..|++++.+|..|+||+++|.+.....+
T Consensus 188 v~~L-------------------l~~ga~~~~~~~~g~t~l~~A~~~~~~~i 220 (231)
T 3aji_A 188 AKFL-------------------VTQGASIYIENKEEKTPLQVAKGGLGLIL 220 (231)
T ss_dssp HHHH-------------------HHTTCCSCCCCTTSCCHHHHSCHHHHHHH
T ss_pred HHHH-------------------HHCCCCCCCCCCCCCCHHHHHHhhHHHHH
Confidence 8887 66899999999999999999987655433
No 31
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-39 Score=287.25 Aligned_cols=216 Identities=16% Similarity=0.178 Sum_probs=163.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhc----ccchhcccCCCCcHHHHHHHcCCH-HHHHHHHhcCCCCccccCCCC
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAE----NLDLAKRNRIGCTALFYAAASGSV-ELVKATMEGNEDITMVPQDDK 129 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~----~~d~~~~d~~g~tpLh~A~~~g~~-~~v~~Ll~~g~~~~~~~~~d~ 129 (396)
|..+.+||+.||..|+.++|++||+.+... ...++..|..|.||||+|+..++. .++++|++.|++ ++.+|.
T Consensus 8 d~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad---vn~~d~ 84 (269)
T 4b93_B 8 DYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG---VNVTSQ 84 (269)
T ss_dssp CCHHHHHHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCC---TTCCCT
T ss_pred CccchhHHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC---CCCcCC
Confidence 778899999999999999999999887211 011367788999999999988776 588999999999 566678
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccch
Q 037504 130 DRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK 208 (396)
Q Consensus 130 ~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
+|+||||+|+..|+.+++++|++.++ ....+.+| .||+|+|+..+
T Consensus 85 ~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g-------------~t~l~~a~~~~--------------------- 130 (269)
T 4b93_B 85 DGSSPLHVAALHGRADLIPLLLKHGANAGARNADQ-------------AVPLHLACQQG--------------------- 130 (269)
T ss_dssp TSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTC-------------CCHHHHHHHHT---------------------
T ss_pred CCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCC-------------CCccccccccC---------------------
Confidence 99999999999999999999999998 55566666 89999999888
Q ss_pred hhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504 209 AVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 209 ~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
..++++.++ ..+.+++.+|..|+||||+|++.|+.+++++|+++|++ +|.+|..|+||||+|+..
T Consensus 131 ------~~~~~~~Ll-----~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad----vn~~~~~g~t~Lh~A~~~ 195 (269)
T 4b93_B 131 ------HFQVVKCLL-----DSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGAS----INASNNKGNTALHEAVIE 195 (269)
T ss_dssp ------CHHHHHHHH-----HTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCC----TTCBCTTSCBHHHHHHHT
T ss_pred ------hHHHHHHHH-----HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----CCccccCCCcHHHHHHHc
Confidence 356666555 45788999999999999999999999999999999999 899999999999999999
Q ss_pred CCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh
Q 037504 289 PPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH 341 (396)
Q Consensus 289 ~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~ 341 (396)
|+.+++++| +..|++++.+|++|+|||++|.+..
T Consensus 196 g~~~~v~~L-------------------l~~Gad~~~~d~~G~TpL~~A~~~~ 229 (269)
T 4b93_B 196 KHVFVVELL-------------------LLHGASVQVLNKRQRTAVDCAEQNS 229 (269)
T ss_dssp TCHHHHHHH-------------------HHTTCCSCCCCTTSCCSGGGSCTTC
T ss_pred CCHHHHHHH-------------------HHCCCCCCCcCCCCCCHHHHHHhCC
Confidence 999988887 7789999999999999999997643
No 32
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-37 Score=270.27 Aligned_cols=145 Identities=19% Similarity=0.214 Sum_probs=128.2
Q ss_pred CCCCccccccccCCCcc--cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE--EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVK 79 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~--~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~ 79 (396)
||.+++++++..+++.. .+..|.||||+|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++
T Consensus 2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~ 79 (223)
T 2f8y_A 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQ-DNMGRTPLHAAVSADAQGVFQILIR 79 (223)
T ss_dssp ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 67889999998877654 478899999999999999999999986 8899888 8999999999999999999999999
Q ss_pred Hhhhc-ccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 80 KMKAE-NLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 80 ~~~~~-~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
.+ + ++ +.++..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+|+..|+.+++++|++.++
T Consensus 80 ~~--~~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 149 (223)
T 2f8y_A 80 NR--ATDL--DARMHDGTTPLILAARLAVEGMLEDLINSHAD---VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA 149 (223)
T ss_dssp BT--TSCT--TCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---TTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTC
T ss_pred cC--CCCc--ccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCC---CcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 87 4 44 88999999999999999999999999999999 55567789999999999999999999998776
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=9.4e-39 Score=279.74 Aligned_cols=216 Identities=15% Similarity=0.087 Sum_probs=158.1
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCc---cccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCC
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHK---DEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIG 95 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~---~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g 95 (396)
.+..|.||||+|+..|+.++++.|++... .+++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|
T Consensus 4 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g 78 (236)
T 1ikn_D 4 LTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAG--CDP--ELRDFRG 78 (236)
T ss_dssp ---CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCC--CCS--CCCCTTC
T ss_pred CCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CCcCCCC
Confidence 46667777777777777777777766422 256666 677777777777777777777777766 555 6777777
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcCCCC---ccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhh
Q 037504 96 CTALFYAAASGSVELVKATMEGNEDI---TMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIE 172 (396)
Q Consensus 96 ~tpLh~A~~~g~~~~v~~Ll~~g~~~---~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~ 172 (396)
.||||+|+..|+.+++++|++.|++. ..+...|..|.||||+|+..|+.+++++|++.++
T Consensus 79 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~----------------- 141 (236)
T 1ikn_D 79 NTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGA----------------- 141 (236)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTC-----------------
T ss_pred CCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----------------
Confidence 77777777777777777777777542 1134455567777777777777777777776554
Q ss_pred ccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC-CCCcHHHHHHHc
Q 037504 173 TDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE-NGHTIFHIAVSN 251 (396)
Q Consensus 173 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~-~g~t~Lh~A~~~ 251 (396)
+++.++. .|+||||+|+..
T Consensus 142 ------------------------------------------------------------~~~~~~~~~g~tpL~~A~~~ 161 (236)
T 1ikn_D 142 ------------------------------------------------------------DVNAQEPCNGRTALHLAVDL 161 (236)
T ss_dssp ------------------------------------------------------------CTTCCCTTTCCCHHHHHHHT
T ss_pred ------------------------------------------------------------CCCCCCCCCCCCHHHHHHHc
Confidence 3555665 789999999999
Q ss_pred CcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhh--hhcCC
Q 037504 252 RMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAE--EKNND 329 (396)
Q Consensus 252 ~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~--~~~~~ 329 (396)
|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++| +..|++.. .++..
T Consensus 162 ~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~~L-------------------l~~ga~~~~~~~~~~ 218 (236)
T 1ikn_D 162 QNPDLVSLLLKCGAD----VNRVTYQGYSPYQLTWGRPSTRIQQQL-------------------GQLTLENLQMLPESE 218 (236)
T ss_dssp TCHHHHHHHHTTTCC----SCCCCTTCCCGGGGCTTSSCHHHHHHH-------------------HTTSCGGGSSCCCCC
T ss_pred CCHHHHHHHHHcCCC----CCcccCCCCCHHHHHHccCchHHHHHH-------------------HHcchhhhhcCCccc
Confidence 999999999999998 888999999999999999998888877 66777666 88889
Q ss_pred CCCchhhHHH
Q 037504 330 GLTPGDLFIK 339 (396)
Q Consensus 330 g~tpl~~a~~ 339 (396)
|.||.+.+.+
T Consensus 219 ~~~~~~~~~~ 228 (236)
T 1ikn_D 219 DEESYDTESE 228 (236)
T ss_dssp TTTCCCCC--
T ss_pred hHHHHhhhcc
Confidence 9999887654
No 34
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=100.00 E-value=1.3e-37 Score=290.27 Aligned_cols=244 Identities=16% Similarity=0.107 Sum_probs=203.2
Q ss_pred CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK 80 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 80 (396)
||.+++++|+..+.+.. .+..|.||||+|+..|+.++|++|++. +.+++ +..|.||||+|+..|+.++|++|++.
T Consensus 31 g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~ 106 (364)
T 3ljn_A 31 GQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASV-GEVHS---LWHGQKPIHLAVMANKTDLVVALVEG 106 (364)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHH-CCCCC---CBTTBCHHHHHHHTTCHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHC-CCCcc---ccCCCCHHHHHHHcCCHHHHHHHHHh
Confidence 67788999998876555 688899999999999999999999987 66443 45799999999999999999999998
Q ss_pred hhhcccchhc-----------------ccCCCCcHHHHHHHcC--CHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhc
Q 037504 81 MKAENLDLAK-----------------RNRIGCTALFYAAASG--SVELVKATMEGNEDITMVPQDDKDRMLPIVGAASL 141 (396)
Q Consensus 81 ~~~~~~d~~~-----------------~d~~g~tpLh~A~~~g--~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~ 141 (396)
+.....+++. +|..|.||||+|+..| +.+++++|+++|++ ++.+|..|.||||+|+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~---~~~~d~~g~t~L~~A~~~ 183 (364)
T 3ljn_A 107 AKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGAS---PTAKDKADETPLMRAMEF 183 (364)
T ss_dssp HHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHT
T ss_pred ccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHc
Confidence 4222222355 8999999999999999 99999999999999 566677999999999999
Q ss_pred CCHHHHHHHHhhccc------CCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504 142 GHTEVVEFLYRETKN------SLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERA 215 (396)
Q Consensus 142 ~~~~~v~~Ll~~~~~------~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
|+.+++++|++.++. +..+..| .||||+|+..| .
T Consensus 184 g~~~~v~~Ll~~g~~~~~~~~~~~~~~g-------------~t~L~~A~~~g---------------------------~ 223 (364)
T 3ljn_A 184 RNREALDLMMDTVPSKSSLRLDYANKQG-------------NSHLHWAILIN---------------------------W 223 (364)
T ss_dssp TCHHHHHHHHHHCSCSSSCCTTCCCTTC-------------CCTTHHHHTTT---------------------------C
T ss_pred CCHHHHHHHHhcccccccccccccCCCC-------------CcHHHHHHHcC---------------------------C
Confidence 999999999999872 2344455 89999999998 3
Q ss_pred HHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcccccc--------ccccccCCCCchhhhhhc
Q 037504 216 LELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADL--------LFDSKDKDGNNILHLAGK 287 (396)
Q Consensus 216 ~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~--------~~n~~d~~g~TpLh~A~~ 287 (396)
.++++.|+ ..+.+++.+|..|+||||+|+..|+.+++++|+++|++... .....+..|+|||++|+.
T Consensus 224 ~~~v~~Ll-----~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~ 298 (364)
T 3ljn_A 224 EDVAMRFV-----EMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAA 298 (364)
T ss_dssp HHHHHHHH-----TTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSC
T ss_pred HHHHHHHH-----HcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhh
Confidence 67777665 46888999999999999999999999999999999987421 011257789999999999
Q ss_pred CCCCCccccc
Q 037504 288 LPPLNRLNIV 297 (396)
Q Consensus 288 ~~~~~~~~~l 297 (396)
.++.+.+..|
T Consensus 299 ~~~~~~v~~l 308 (364)
T 3ljn_A 299 DPSKQEVLQL 308 (364)
T ss_dssp CHHHHHHHHH
T ss_pred ccCHHHHHHH
Confidence 9875544433
No 35
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=3.3e-37 Score=276.92 Aligned_cols=230 Identities=20% Similarity=0.182 Sum_probs=172.6
Q ss_pred ccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccc-hhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC
Q 037504 51 GDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLD-LAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDK 129 (396)
Q Consensus 51 ~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d-~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~ 129 (396)
+.+ |..|+||||+|+..|+.++|++|++.+ ++.+ ++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|.
T Consensus 3 ~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~---~~~~~~ 76 (282)
T 1oy3_D 3 GYV-TEDGDTALHLAVIHQHEPFLDFLLGFS--AGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG---VLVAER 76 (282)
T ss_dssp CCC-CTTCCCHHHHHHHTTCHHHHHHHHHHH--TTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---SSCCCT
T ss_pred Ccc-CCCCCcHHHHHHHcCCHHHHHHHHhcC--CCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCC
Confidence 344 899999999999999999999999998 5521 489999999999999999999999999999999 556677
Q ss_pred CCCcHHHHHHhcCCHHHHHHHHhhcccCCCC-cchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccch
Q 037504 130 DRMLPIVGAASLGHTEVVEFLYRETKNSLKD-DDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK 208 (396)
Q Consensus 130 ~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~-~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
.|+||||+|+..|+.+++++|++.++..... .................++++.++..+..
T Consensus 77 ~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 137 (282)
T 1oy3_D 77 GGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPE------------------- 137 (282)
T ss_dssp TSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC------------------------------------------------
T ss_pred CCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccc-------------------
Confidence 9999999999999999999999988722111 11100000011112224555555443310
Q ss_pred hhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccC-CCCchhhhhhc
Q 037504 209 AVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDK-DGNNILHLAGK 287 (396)
Q Consensus 209 ~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~-~g~TpLh~A~~ 287 (396)
......+...+..++.+|..|+||||+|+..|+.+++++|+++|++ ++.++. .|+||||+|+.
T Consensus 138 ------------~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~g~tpL~~A~~ 201 (282)
T 1oy3_D 138 ------------NEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD----LNKPEPTCGRTPLHLAVE 201 (282)
T ss_dssp ------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC----TTCCCTTTCCCHHHHHHH
T ss_pred ------------hhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----CCCCCCCCCcCHHHHHHH
Confidence 0111122334566888999999999999999999999999999999 888885 49999999999
Q ss_pred CCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHH
Q 037504 288 LPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKE 340 (396)
Q Consensus 288 ~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~ 340 (396)
.|+.+++++| +..|++++.+|..|+|||++|...
T Consensus 202 ~~~~~~v~~L-------------------l~~gad~~~~d~~g~tpL~~A~~~ 235 (282)
T 1oy3_D 202 AQAASVLELL-------------------LKAGADPTARMYGGRTPLGSALLR 235 (282)
T ss_dssp TTCHHHHHHH-------------------HHTTCCTTCCCTTSCCHHHHHHTS
T ss_pred cCCHHHHHHH-------------------HHcCCCCcccccCCCCHHHHHHHc
Confidence 9999988887 668999999999999999999864
No 36
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=9.6e-36 Score=259.81 Aligned_cols=201 Identities=20% Similarity=0.199 Sum_probs=172.0
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhccc---chhcccCCCCcH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENL---DLAKRNRIGCTA 98 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~---d~~~~d~~g~tp 98 (396)
.|.||||+|+..|+.++++.|++..+.+++.+ |..|+||||+|+..|+.+++++|++.+ +++ +.+.+|..|.||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~~~~~~~~~~~~g~t~ 78 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEAA--PELVFEPMTSELYEGQTA 78 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHC--GGGGGCCCCSTTTTTCCH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--chhccccccccCCCCcCH
Confidence 48899999999999999999999879999998 999999999999999999999999998 443 125677899999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccC----------CCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHH
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQ----------DDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELL 167 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~----------~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l 167 (396)
||+|+..|+.+++++|+++|++++..+. .|..|.||||+|+..|+.+++++|++.|+ .+..+..|
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g---- 154 (232)
T 2rfa_A 79 LHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLG---- 154 (232)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTS----
T ss_pred HHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC----
Confidence 9999999999999999999999653221 13479999999999999999999999998 56677777
Q ss_pred HHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccc------ccccCCC
Q 037504 168 VKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLI------WKFDENG 241 (396)
Q Consensus 168 ~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i------~~~d~~g 241 (396)
.||||+|+..+ ..+++..+++.++. .+.+. +.+|..|
T Consensus 155 ---------~t~L~~A~~~~---------------------------~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g 197 (232)
T 2rfa_A 155 ---------NTVLHILILQP---------------------------NKTFACQMYNLLLS-YDGGDHLKSLELVPNNQG 197 (232)
T ss_dssp ---------CCHHHHHHTCS---------------------------CHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTS
T ss_pred ---------CCHHHHHHHcC---------------------------ChHHHHHHHHHHHh-cCCchhhhhhhccCCCCC
Confidence 89999999998 24555444444433 44444 6889999
Q ss_pred CcHHHHHHHcCcHHHHHHHHhhccc
Q 037504 242 HTIFHIAVSNRMREIFKFIFEISSV 266 (396)
Q Consensus 242 ~t~Lh~A~~~~~~~~v~~Ll~~g~~ 266 (396)
+||||+|++.|+.+++++|+++|..
T Consensus 198 ~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 198 LTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 9999999999999999999999987
No 37
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=2e-37 Score=284.45 Aligned_cols=253 Identities=13% Similarity=0.065 Sum_probs=190.0
Q ss_pred CCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccc----------------cCCCCchHHHHH
Q 037504 3 HSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDV----------------ITRLGDTALHVA 65 (396)
Q Consensus 3 h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~----------------~~~~g~t~Lh~A 65 (396)
+.+.+++++..+.++. .+..|.|+++ |+.++|+.||++ |.+.+.. ......+.+|+|
T Consensus 31 ~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~-g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a 104 (327)
T 1sw6_A 31 THDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQR-LLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104 (327)
T ss_dssp CTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHH-HHC-------------------------------C
T ss_pred cCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHh-ccCCccccchHhhhcccccccccccCCccchhHHH
Confidence 3467888888887766 5778999987 999999999987 6654431 011223345888
Q ss_pred HHcCCHHHHHHHHHHhhhcccchhc-ccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCC-
Q 037504 66 AAANRIDFVKKLVKKMKAENLDLAK-RNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGH- 143 (396)
Q Consensus 66 ~~~g~~~~v~~Ll~~~~~~~~d~~~-~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~- 143 (396)
+..+..+++++|++.| .++ +. +|..|+||||+|+..|+.++|++|+++|++ ++.+|..|+||||+|+..|+
T Consensus 105 ~~~~~~~~~~~l~~~g--~dv--n~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad---~n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 105 FDSLLQEVNDAFPNTQ--LNL--NIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN---RLYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp HHHHHHHHHHHCTTSC--CCS--CSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTBCCTTCCCHHHHHHHSSHH
T ss_pred HHhhHHHHHHHHHhcC--CCc--ccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHhccc
Confidence 8888889999999887 666 88 899999999999999999999999999999 55677899999999999998
Q ss_pred --HHHHHHHHhhcc--cCCCCcchhHHHHHHhhccchhhHHHHHHh----cCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504 144 --TEVVEFLYRETK--NSLKDDDCIELLVKLIETDSYETALHVLAR----KNLTSSNQNPRGIFQRYFNLGAKAVENERA 215 (396)
Q Consensus 144 --~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
.++++.|++.+. .+..+..| +||||+|+. .+ .
T Consensus 178 ~~~~~~~~ll~~~~~~~~~~d~~g-------------~tpLh~A~~~~~~~g---------------------------~ 217 (327)
T 1sw6_A 178 YDSGTFEALLDYLYPCLILEDSMN-------------RTILHHIIITSGMTG---------------------------C 217 (327)
T ss_dssp HHTTCHHHHHHHHGGGGGEECTTC-------------CCHHHHHHHHHTSTT---------------------------C
T ss_pred ccHHHHHHHHHhhhccccCCCCCC-------------CCHHHHHHHHccccc---------------------------c
Confidence 788888888874 44566666 899999998 55 3
Q ss_pred HHHHHHHHHHHH---------------HhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCc
Q 037504 216 LELVELLWENFL---------------FKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNN 280 (396)
Q Consensus 216 ~~~~~~ll~~ll---------------~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~T 280 (396)
.++++.+++... ...+.+++.+|..|+||||+|+. +++|+++ + +|.+|..|+|
T Consensus 218 ~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~--~----~n~~d~~G~T 285 (327)
T 1sw6_A 218 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIAN--M----LNAQDSNGDT 285 (327)
T ss_dssp HHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHH--T----TTCCCTTSCC
T ss_pred HHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHh--C----CCCCCCCCCC
Confidence 556666555421 12277889999999999999986 8999988 4 7789999999
Q ss_pred hhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHH
Q 037504 281 ILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIK 339 (396)
Q Consensus 281 pLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~ 339 (396)
|||+|+..|+.+++++| +..|++++.+|..|+||||+|++
T Consensus 286 pLh~A~~~g~~~~v~~L-------------------l~~Gad~~~~d~~G~TpL~~A~~ 325 (327)
T 1sw6_A 286 CLNIAARLGNISIVDAL-------------------LDYGADPFIANKSGLRPVDFGAG 325 (327)
T ss_dssp HHHHHHHHCCHHHHHHH-------------------HHTTCCTTCCCTTSCCGGGGTCC
T ss_pred HHHHHHHcCCHHHHHHH-------------------HHcCCCCcccCCCCCCHHHHHHh
Confidence 99999999999988887 77899999999999999999864
No 38
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.9e-36 Score=254.08 Aligned_cols=127 Identities=22% Similarity=0.353 Sum_probs=114.4
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504 21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF 100 (396)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh 100 (396)
..+.||||.|+..|+.+.++.|+...+.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~l~ 77 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRG--ADI--NLQNSISDSPYL 77 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CCCCCCCCCHHH
Confidence 457899999999999999999999877788888 899999999999999999999999998 776 889999999999
Q ss_pred HHHHcCCHHHHHHHHh-cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 101 YAAASGSVELVKATME-GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 101 ~A~~~g~~~~v~~Ll~-~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
+|+..|+.+++++|++ .+++ ++..|..|.||||+|+..|+.+++++|++.+.
T Consensus 78 ~A~~~~~~~~~~~Ll~~~~~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 130 (201)
T 3hra_A 78 YAGAQGRTEILAYMLKHATPD---LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGR 130 (201)
T ss_dssp HHHHTTCHHHHHHHHHHSCCC---TTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCC
T ss_pred HHHHcCCHHHHHHHHhccCcc---cccccCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999995 4556 55667789999999999999999999998873
No 39
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=2.1e-36 Score=272.34 Aligned_cols=217 Identities=14% Similarity=0.049 Sum_probs=183.1
Q ss_pred HHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHH
Q 037504 31 ALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVEL 110 (396)
Q Consensus 31 ~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~ 110 (396)
+...+.+.+..+|.+. +++.+ |..|.||||+|+..|+.++|++|++.| +++ +.+ +|+||||+|+..|+.++
T Consensus 7 i~~~~~~~v~~lL~~~--~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~--~g~t~L~~A~~~g~~~~ 77 (285)
T 3kea_A 7 INTWKSKQLKSFLSSK--DTFKA-DVHGHSASYYAIADNNVRLVCTLLNAG--ALK--NLL--ENEFPLHQAATLEDTKI 77 (285)
T ss_dssp GGGCCHHHHHHHHHST--TTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--GGG--SCC--TTCCHHHHHTTSSSCHH
T ss_pred HHhcCHHHHHHHHHhC--CCCcc-CCCCCCHHHHHHHcCCHHHHHHHHhCC--CCC--CCC--CCCCHHHHHHHcCCHHH
Confidence 4456677777788764 57777 999999999999999999999999998 666 666 49999999999999999
Q ss_pred HHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCC
Q 037504 111 VKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLT 189 (396)
Q Consensus 111 v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~ 189 (396)
+++|+++|++ ++.+|..|+||||+|+..|+.+++++|++.++ .+..+..|+ .||||+|+..+
T Consensus 78 v~~Ll~~ga~---~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~------------~t~L~~A~~~~-- 140 (285)
T 3kea_A 78 VKILLFSGLD---DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGW------------KTSFYHAVMLN-- 140 (285)
T ss_dssp HHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGG------------GSHHHHHHHTT--
T ss_pred HHHHHHCCCC---CCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCC------------CCHHHHHHHcC--
Confidence 9999999999 55667799999999999999999999999998 444554441 59999999988
Q ss_pred CCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccC-CCCcHHHHHHHcCcHHHHHHHHhhccccc
Q 037504 190 SSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDE-NGHTIFHIAVSNRMREIFKFIFEISSVAD 268 (396)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~-~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~ 268 (396)
..++++++++. +... .+. .|+||||+|+..|+.+++++|+++|++
T Consensus 141 -------------------------~~~~v~~Ll~~-----g~~~--~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad-- 186 (285)
T 3kea_A 141 -------------------------DVSIVSYFLSE-----IPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTS-- 186 (285)
T ss_dssp -------------------------CHHHHHHHHTT-----SCTT--CCCSTHHHHHHHHHHTTCHHHHHHHHHHHHH--
T ss_pred -------------------------CHHHHHHHHhC-----CCcc--ccccCCccHHHHHHHcChHHHHHHHHHcCCC--
Confidence 36777766643 3332 333 899999999999999999999999999
Q ss_pred cccccccCCCCch-hhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcC
Q 037504 269 LLFDSKDKDGNNI-LHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNN 328 (396)
Q Consensus 269 ~~~n~~d~~g~Tp-Lh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~ 328 (396)
++.+|..|+|| ||+|+..++.+++++| +..|++++.+|.
T Consensus 187 --~n~~~~~g~t~~L~~A~~~~~~~~v~~L-------------------l~~gad~~~~~~ 226 (285)
T 3kea_A 187 --TNTNNSLLFIPDIKLAIDNKDIEMLQAL-------------------FKYDINIYSANL 226 (285)
T ss_dssp --TCTTCCCBCCTTHHHHHHHTCHHHHHHH-------------------TTSCBCSTTTTG
T ss_pred --CCcccCCCCChHHHHHHHcCCHHHHHHH-------------------HHcCCCCCCCCh
Confidence 89999999998 9999999999998887 556777776664
No 40
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=1.2e-36 Score=263.93 Aligned_cols=208 Identities=19% Similarity=0.155 Sum_probs=182.2
Q ss_pred CCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHH
Q 037504 34 GDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKA 113 (396)
Q Consensus 34 g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~ 113 (396)
|+.+++++|++. +.+++...|..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+|+..|+.+++++
T Consensus 2 g~~~~i~~Ll~~-g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~ 76 (223)
T 2f8y_A 2 DAPAVISDFIYQ-GASLHNQTDRTGETALHLAARYSRSDAAKRLLEAS--ADA--NIQDNMGRTPLHAAVSADAQGVFQI 76 (223)
T ss_dssp ---CCEETTEET-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred CcHHHHHHHHHc-CCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcC--CCC--CCcCCCCCCHHHHHHHcCCHHHHHH
Confidence 567788888875 77887766899999999999999999999999998 776 8999999999999999999999999
Q ss_pred HHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCC
Q 037504 114 TMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSN 192 (396)
Q Consensus 114 Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~ 192 (396)
|+++++.. ++..+..|.||||+|+..|+.+++++|++.++ .+..+..| .||||+|+..+
T Consensus 77 Ll~~~~~~--~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g-------------~t~L~~A~~~~----- 136 (223)
T 2f8y_A 77 LIRNRATD--LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLG-------------KSALHWAAAVN----- 136 (223)
T ss_dssp HHHBTTSC--TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTS-------------CBHHHHHHHTT-----
T ss_pred HHHcCCCC--cccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCC-------------CcHHHHHHHcC-----
Confidence 99998732 55667799999999999999999999999988 45566666 89999999988
Q ss_pred CCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccc
Q 037504 193 QNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFD 272 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n 272 (396)
..++++++++ .+.+++.+|..|+||||+|++.|+.+++++|+++|++ ++
T Consensus 137 ----------------------~~~~v~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~ 185 (223)
T 2f8y_A 137 ----------------------NVDAAVVLLK-----NGANKDMQNNREETPLFLAAREGSYETAKVLLDHFAN----RD 185 (223)
T ss_dssp ----------------------CHHHHHHHHH-----TTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TT
T ss_pred ----------------------CHHHHHHHHH-----cCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCC----Cc
Confidence 3667776654 4788999999999999999999999999999999999 88
Q ss_pred cccCCCCchhhhhhcCCCCCccccc
Q 037504 273 SKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 273 ~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
.+|..|.||||+|+..++.+++++|
T Consensus 186 ~~~~~g~t~l~~A~~~~~~~i~~~L 210 (223)
T 2f8y_A 186 ITDHMDRLPRDIAQERMHHDIVRLL 210 (223)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHH
T ss_pred cccccCCCHHHHHHHhcchHHHHHH
Confidence 8999999999999999998888776
No 41
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=100.00 E-value=1.5e-36 Score=271.69 Aligned_cols=222 Identities=18% Similarity=0.185 Sum_probs=156.1
Q ss_pred cccccccchHHHHHHHcCCHHHHHHHHHh---Ccccccc---ccCCCCchHHHHHHHc---CCHHHHHHHHHHhhhcc--
Q 037504 17 VEEIRTRRLKLYRVALNGDWARAKVIYDE---HKDEIGD---VITRLGDTALHVAAAA---NRIDFVKKLVKKMKAEN-- 85 (396)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~---~~~~~~~---~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~-- 85 (396)
...+..|.||||+|+..|+.++|+.|++. .+.+++. ..+..|+||||+|+.. |+.++|++|++.|...+
T Consensus 7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~ 86 (273)
T 2pnn_A 7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL 86 (273)
T ss_dssp ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence 35688899999999999999999999973 4554442 3378999999999987 99999999999982210
Q ss_pred ---c--chhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC--------------CCCcHHHHHHhcCCHHH
Q 037504 86 ---L--DLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDK--------------DRMLPIVGAASLGHTEV 146 (396)
Q Consensus 86 ---~--d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~--------------~g~tpLh~A~~~~~~~~ 146 (396)
+ ....+|..|.||||+|+..|+.+++++|+++|++++ ..+. .|.||||+|+..|+.++
T Consensus 87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~ 163 (273)
T 2pnn_A 87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ---AAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAI 163 (273)
T ss_dssp HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHH
T ss_pred hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcC---ccccccccccccccccccCCCCHHHHHHHcCCHHH
Confidence 2 112367789999999999999999999999999954 3443 68999999999999999
Q ss_pred HHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHH
Q 037504 147 VEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENF 226 (396)
Q Consensus 147 v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~l 226 (396)
+++|++.+.
T Consensus 164 v~~Ll~~~~----------------------------------------------------------------------- 172 (273)
T 2pnn_A 164 VKFLLQNSW----------------------------------------------------------------------- 172 (273)
T ss_dssp HHHHHHCSS-----------------------------------------------------------------------
T ss_pred HHHHHhccc-----------------------------------------------------------------------
Confidence 999987210
Q ss_pred HHhCCcccccccCCCCcHHHHHHHcCc---------HHHHHHHHhhcccccc---ccccccCCCCchhhhhhcCCCCCcc
Q 037504 227 LFKYPDLIWKFDENGHTIFHIAVSNRM---------REIFKFIFEISSVADL---LFDSKDKDGNNILHLAGKLPPLNRL 294 (396)
Q Consensus 227 l~~~~~~i~~~d~~g~t~Lh~A~~~~~---------~~~v~~Ll~~g~~~~~---~~n~~d~~g~TpLh~A~~~~~~~~~ 294 (396)
.+.+++.+|.+|+||||+|+..|+ .+++++|+++|++.+. +++.+|..|+||||+|+..|+.+++
T Consensus 173 ---~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv 249 (273)
T 2pnn_A 173 ---QPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVL 249 (273)
T ss_dssp ---CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ---CCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHH
Confidence 123455667777777777777776 6778888888877210 0024778888888888888887777
Q ss_pred ccccchhHhHHHHHHHHHHHhhhcchh-hhhhhcCCCCCch
Q 037504 295 NIVSVAALQLQRELLWFQEVKKVVPRK-FAEEKNNDGLTPG 334 (396)
Q Consensus 295 ~~l~~~~~~~~~~l~~~~~v~~l~~~~-~~~~~~~~g~tpl 334 (396)
++| +..|+ |+......+.+|-
T Consensus 250 ~~L-------------------l~~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 250 AYI-------------------LQREIHEPECRHAAAHHHH 271 (273)
T ss_dssp HHH-------------------HHHHTC-------------
T ss_pred HHH-------------------HHCCCCCchhhhhhhhhcc
Confidence 776 55666 6666666666554
No 42
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2e-36 Score=268.28 Aligned_cols=191 Identities=20% Similarity=0.231 Sum_probs=150.4
Q ss_pred ccchHHHHHHHcCCHHHH----HHHHHhCcccccc----ccCCCCchHHHHHHHc---CCHHHHHHHHHHhhhcccc---
Q 037504 22 TRRLKLYRVALNGDWARA----KVIYDEHKDEIGD----VITRLGDTALHVAAAA---NRIDFVKKLVKKMKAENLD--- 87 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v----~~ll~~~~~~~~~----~~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~d--- 87 (396)
.|.||||.|+..|+.+.| +.|++ .+.+++. . |..|+||||+|+.. |+.+++++|++.| ++++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~-~g~~i~~~~~~~-d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g--~~~~~~~ 76 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRW-NSKYLTDSAYTE-GSTGKTCLMKAVLNLQDGVNACIMPLLQID--KDSGNPK 76 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHH-HTCCTTSGGGSB-TTTTBCHHHHHHHTCBTTBCTTHHHHHHHH--HHTTCSS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHH-cCCCcccccccC-CCCCCCHHHHHHHccccchHHHHHHHHhcC--Ccccchh
Confidence 488999999999999855 44444 4888887 5 89999999999999 9999999999998 4431
Q ss_pred --h----hcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCC-------------CCcHHHHHHhcCCHHHHH
Q 037504 88 --L----AKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKD-------------RMLPIVGAASLGHTEVVE 148 (396)
Q Consensus 88 --~----~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~-------------g~tpLh~A~~~~~~~~v~ 148 (396)
+ ..+|..|.||||+|+..|+.+++++|+++|++++ .+|.. |.||||+|+..|+.++++
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 153 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVH---LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT 153 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHH
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCC---cccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 0 1245789999999999999999999999999954 44444 999999999999999999
Q ss_pred HHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHH
Q 037504 149 FLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLF 228 (396)
Q Consensus 149 ~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~ 228 (396)
+|++.+.
T Consensus 154 ~Ll~~~~------------------------------------------------------------------------- 160 (256)
T 2etb_A 154 YLLENPH------------------------------------------------------------------------- 160 (256)
T ss_dssp HHHHCSS-------------------------------------------------------------------------
T ss_pred HHHhccc-------------------------------------------------------------------------
Confidence 9998210
Q ss_pred hCCcccccccCCCCcHHHHHHH--cCcHH-------HHHHHHhhcccccccc-------ccccCCCCchhhhhhcCCCCC
Q 037504 229 KYPDLIWKFDENGHTIFHIAVS--NRMRE-------IFKFIFEISSVADLLF-------DSKDKDGNNILHLAGKLPPLN 292 (396)
Q Consensus 229 ~~~~~i~~~d~~g~t~Lh~A~~--~~~~~-------~v~~Ll~~g~~~~~~~-------n~~d~~g~TpLh~A~~~~~~~ 292 (396)
.+.+++.+|..|+||||+|+. .++.+ ++++|+++|++ + +.+|..|+||||+|+..|+.+
T Consensus 161 -~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~----~~~~~~~~~~~d~~g~tpL~~A~~~g~~~ 235 (256)
T 2etb_A 161 -QPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGAR----LCPTVQLEEISNHQGLTPLKLAAKEGKIE 235 (256)
T ss_dssp -CCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHH----HSTTCCGGGCCCTTSCCHHHHHHHTTCHH
T ss_pred -cCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCC----cccccccccccCCCCCCHHHHHHHhCCHH
Confidence 123455667777777777777 66666 77777777777 5 677777888888888777777
Q ss_pred ccccc
Q 037504 293 RLNIV 297 (396)
Q Consensus 293 ~~~~l 297 (396)
++++|
T Consensus 236 ~v~~L 240 (256)
T 2etb_A 236 IFRHI 240 (256)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77666
No 43
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=260.11 Aligned_cols=218 Identities=17% Similarity=0.161 Sum_probs=191.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
|..|.||||.|+..|+.+++++|++.| .++ +.+|..|.||||+|+..|+.+++++|+++|+++.... +..|.||
T Consensus 6 d~~~~~~l~~A~~~g~~~~~~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~--~~~~~t~ 79 (240)
T 3eu9_A 6 DDYSTWDIVKATQYGIYERCRELVEAG--YDV--RQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG--GDLNSTP 79 (240)
T ss_dssp SCGGGCCHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCB--TTTTBCH
T ss_pred ccccchHHHHHHHcCChHHHHHHHHcC--CCc--CCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhc--CCcCCCh
Confidence 788999999999999999999999998 666 8999999999999999999999999999999864333 3369999
Q ss_pred HHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH
Q 037504 135 IVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE 213 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (396)
||+|+..|+.+++++|++.++ .+..+..| .||||+|+..+
T Consensus 80 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g-------------~t~l~~A~~~~-------------------------- 120 (240)
T 3eu9_A 80 LHWATRQGHLSMVVQLMKYGADPSLIDGEG-------------CSCIHLAAQFG-------------------------- 120 (240)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-------------CCHHHHHHHTT--------------------------
T ss_pred hHHHHHcCCHHHHHHHHHcCCCCcccCCCC-------------CCHHHHHHHcC--------------------------
Confidence 999999999999999999988 45555666 89999999988
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCc-HHHHHHHHhhccccccccccccC-CCCchhhhhhcCCCC
Q 037504 214 RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRM-REIFKFIFEISSVADLLFDSKDK-DGNNILHLAGKLPPL 291 (396)
Q Consensus 214 ~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-~~~v~~Ll~~g~~~~~~~n~~d~-~g~TpLh~A~~~~~~ 291 (396)
..++++++++ .+.+++.+|..|.||||+|+..++ .+++++|++.|++ ++..+. .|+||||+|+..|+.
T Consensus 121 -~~~~~~~Ll~-----~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~----~~~~~~~~g~t~L~~A~~~~~~ 190 (240)
T 3eu9_A 121 -HTSIVAYLIA-----KGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVS----VNLGDKYHKNTALHWAVLAGNT 190 (240)
T ss_dssp -CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCC----TTCCCTTTCCCHHHHHHHHTCH
T ss_pred -HHHHHHHHHh-----cCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCC----cchhhccCCCcHHHHHHHcCCH
Confidence 3567776654 577899999999999999997776 8999999999999 788887 999999999999999
Q ss_pred CccccccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHh-HHHHH
Q 037504 292 NRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEH-EELKK 346 (396)
Q Consensus 292 ~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~-~~~~~ 346 (396)
+++++| +..|++++.+|..|+||+++|.+.. .++++
T Consensus 191 ~~v~~L-------------------l~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~ 227 (240)
T 3eu9_A 191 TVISLL-------------------LEAGANVDAQNIKGESALDLAKQRKNVWMIN 227 (240)
T ss_dssp HHHHHH-------------------HHHTCCTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred HHHHHH-------------------HHcCCCCCCcCCCCCCHHHHHHHcCcHHHHH
Confidence 988887 6689999999999999999998753 33433
No 44
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.5e-34 Score=238.77 Aligned_cols=156 Identities=28% Similarity=0.350 Sum_probs=142.4
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504 25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA 104 (396)
Q Consensus 25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~ 104 (396)
++|+.||+.|+.++|+.||+. |++++.+ |..|+||||+|+..++.+++++|++.| +++ +.+|..|+||||+|+.
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~-Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~g--ad~--~~~d~~g~TpLh~A~~ 79 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN-GADVNAS-DSDGRTPLHHAAENGHKEVVKLLISKG--ADV--NAKDSDGRTPLHHAAE 79 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHC-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcc--cch--hhhccCCCCHHHHHHH
Confidence 579999999999999999985 9999998 999999999999999999999999998 776 9999999999999999
Q ss_pred cCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHH
Q 037504 105 SGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLA 184 (396)
Q Consensus 105 ~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~ 184 (396)
.|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|++.|+
T Consensus 80 ~g~~~~v~~Ll~~gad---vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~ga----------------------------- 127 (169)
T 4gpm_A 80 NGHKEVVKLLISKGAD---VNAKDSDGRTPLHHAAENGHKEVVKLLISKGA----------------------------- 127 (169)
T ss_dssp TTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----------------------------
T ss_pred cCCHHHHHHHHHCcCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----------------------------
Confidence 9999999999999999 56678899999999999999999999998665
Q ss_pred hcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhc
Q 037504 185 RKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEIS 264 (396)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 264 (396)
+++.+|.+|+||||+|+++|+.+++++|+++|
T Consensus 128 ------------------------------------------------d~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~G 159 (169)
T 4gpm_A 128 ------------------------------------------------DVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159 (169)
T ss_dssp ------------------------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred ------------------------------------------------CccccCCCCCCHHHHHHHcCCHHHHHHHHHCC
Confidence 35667889999999999999999999999999
Q ss_pred cc
Q 037504 265 SV 266 (396)
Q Consensus 265 ~~ 266 (396)
++
T Consensus 160 A~ 161 (169)
T 4gpm_A 160 GW 161 (169)
T ss_dssp --
T ss_pred CC
Confidence 98
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=3.1e-35 Score=256.54 Aligned_cols=205 Identities=20% Similarity=0.159 Sum_probs=166.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHH-hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccc--cCCCCCCCc
Q 037504 57 LGDTALHVAAAANRIDFVKKLVKK-MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMV--PQDDKDRML 133 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~--~~~d~~g~t 133 (396)
.|+||||+|+..|+.+++++|++. + .++ +.+|..|+||||+|+..|+.+++++|+++|+++... ...|..|.|
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g--~~~--~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t 77 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEG--CEV--HQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQT 77 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTC--SCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcC--CCc--ccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcC
Confidence 589999999999999999999997 5 555 999999999999999999999999999999884221 456778999
Q ss_pred HHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhh
Q 037504 134 PIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVEN 212 (396)
Q Consensus 134 pLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (396)
|||+|+..|+.+++++|++.++ .+..+.........-.....+.||||+|+..|
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~------------------------- 132 (232)
T 2rfa_A 78 ALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVG------------------------- 132 (232)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHT-------------------------
T ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcC-------------------------
Confidence 9999999999999999999988 33332210000000000112389999999988
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHH----HHHHhhcccccc--ccccccCCCCchhhhhh
Q 037504 213 ERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIF----KFIFEISSVADL--LFDSKDKDGNNILHLAG 286 (396)
Q Consensus 213 ~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v----~~Ll~~g~~~~~--~~n~~d~~g~TpLh~A~ 286 (396)
..++++.|++ .+.+++.+|..|+||||+|+..|+.+++ ++|+++|++... +.+.+|..|+||||+|+
T Consensus 133 --~~~~v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~~A~ 205 (232)
T 2rfa_A 133 --SEEIVRLLIE-----HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAG 205 (232)
T ss_dssp --CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHHHHH
T ss_pred --CHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHHHHH
Confidence 3677776664 5888999999999999999999999988 999999998321 12689999999999999
Q ss_pred cCCCCCccccc
Q 037504 287 KLPPLNRLNIV 297 (396)
Q Consensus 287 ~~~~~~~~~~l 297 (396)
..|+.+++++|
T Consensus 206 ~~g~~~~v~~L 216 (232)
T 2rfa_A 206 VEGNIVMFQHL 216 (232)
T ss_dssp HHTCHHHHHHH
T ss_pred HcCCHHHHHHH
Confidence 99999998887
No 46
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=3e-35 Score=261.29 Aligned_cols=130 Identities=22% Similarity=0.212 Sum_probs=107.8
Q ss_pred ccccchHHHHHHHcCCHHHHHHHHH---hCcccccccc---CCCCchHHHHHH---HcCCHHHHHHHHHHhhhc------
Q 037504 20 IRTRRLKLYRVALNGDWARAKVIYD---EHKDEIGDVI---TRLGDTALHVAA---AANRIDFVKKLVKKMKAE------ 84 (396)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~ll~---~~~~~~~~~~---~~~g~t~Lh~A~---~~g~~~~v~~Ll~~~~~~------ 84 (396)
+..|+++||.|++.|+.+.++.|++ ..+.+++... +..|.||||+|+ ..|+.+++++|++.|...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~ 81 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREF 81 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhh
Confidence 4578999999999999997776666 3477777551 377999999999 779999999999998221
Q ss_pred -ccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCC--------------CCCCcHHHHHHhcCCHHHHHH
Q 037504 85 -NLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDD--------------KDRMLPIVGAASLGHTEVVEF 149 (396)
Q Consensus 85 -~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d--------------~~g~tpLh~A~~~~~~~~v~~ 149 (396)
+.+++..|..|+||||+|+..|+.+++++|+++|++++ ..| ..|.||||+|+..|+.+++++
T Consensus 82 ~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~ 158 (260)
T 3jxi_A 82 INSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH---AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHY 158 (260)
T ss_dssp HTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT---CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHH
T ss_pred hcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC---ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHH
Confidence 12235566699999999999999999999999999954 444 479999999999999999999
Q ss_pred HHh
Q 037504 150 LYR 152 (396)
Q Consensus 150 Ll~ 152 (396)
|++
T Consensus 159 Ll~ 161 (260)
T 3jxi_A 159 LTE 161 (260)
T ss_dssp HHH
T ss_pred HHh
Confidence 998
No 47
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=2.1e-34 Score=237.83 Aligned_cols=150 Identities=29% Similarity=0.355 Sum_probs=140.2
Q ss_pred hHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH
Q 037504 60 TALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA 139 (396)
Q Consensus 60 t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~ 139 (396)
++|+.||+.|+.++|++||+.| +++ |.+|..|+||||+|+..++.+++++|+++|++ ++.+|..|+||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~G--adv--n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad---~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENG--ADV--NASDSDGRTPLHHAAENGHKEVVKLLISKGAD---VNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCC--CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc---hhhhccCCCCHHHHHH
Confidence 5799999999999999999998 777 99999999999999999999999999999999 5667789999999999
Q ss_pred hcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHH
Q 037504 140 SLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELV 219 (396)
Q Consensus 140 ~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (396)
..|+.+++++|++.|+
T Consensus 79 ~~g~~~~v~~Ll~~ga---------------------------------------------------------------- 94 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGA---------------------------------------------------------------- 94 (169)
T ss_dssp HTTCHHHHHHHHHTTC----------------------------------------------------------------
T ss_pred HcCCHHHHHHHHHCcC----------------------------------------------------------------
Confidence 9999999999997664
Q ss_pred HHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 220 ELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 220 ~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
++|.+|.+|+||||+|++.|+.+++++|+++|++ ++.+|.+|+||||+|++.|+.+++++|
T Consensus 95 -------------dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad----~~~~d~~G~TpL~~A~~~g~~~iv~~L 155 (169)
T 4gpm_A 95 -------------DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGAD----VNTSDSDGRTPLDLAREHGNEEVVKLL 155 (169)
T ss_dssp -------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred -------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHcCCHHHHHHH
Confidence 3667788999999999999999999999999999 889999999999999999999999888
No 48
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=100.00 E-value=9e-35 Score=266.82 Aligned_cols=200 Identities=15% Similarity=0.092 Sum_probs=161.1
Q ss_pred hHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHH
Q 037504 25 LKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAA 104 (396)
Q Consensus 25 t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~ 104 (396)
+.+|.|+..+..++++.|++ .|.+++...|..|+||||+|+..|+.++|++|++.| +++ +.+|..|+||||+|+.
T Consensus 99 ~~~~~a~~~~~~~~~~~l~~-~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~G--ad~--n~~d~~g~TpLh~A~~ 173 (327)
T 1sw6_A 99 QQQHVSFDSLLQEVNDAFPN-TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHG--SNR--LYGDNMGESCLVKAVK 173 (327)
T ss_dssp -----CHHHHHHHHHHHCTT-SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TBCCTTCCCHHHHHHH
T ss_pred chhHHHHHhhHHHHHHHHHh-cCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcC--CCC--CCcCCCCCCHHHHHHH
Confidence 34577777777777777765 599999933999999999999999999999999998 777 9999999999999999
Q ss_pred cCC---HHHHHHHHhcC-CCCccccCCCCCCCcHHHHHHh----cCCHHHHHHHHhhcc---------------------
Q 037504 105 SGS---VELVKATMEGN-EDITMVPQDDKDRMLPIVGAAS----LGHTEVVEFLYRETK--------------------- 155 (396)
Q Consensus 105 ~g~---~~~v~~Ll~~g-~~~~~~~~~d~~g~tpLh~A~~----~~~~~~v~~Ll~~~~--------------------- 155 (396)
.|+ .++++.|++.+ ++ ++.+|..|+||||+|+. .|+.+++++|++.+.
T Consensus 174 ~g~~~~~~~~~~ll~~~~~~---~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~ 250 (327)
T 1sw6_A 174 SVNNYDSGTFEALLDYLYPC---LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESK 250 (327)
T ss_dssp SSHHHHTTCHHHHHHHHGGG---GGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------
T ss_pred hcccccHHHHHHHHHhhhcc---ccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCC
Confidence 998 78888888876 44 56667899999999999 899999999998843
Q ss_pred cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccc
Q 037504 156 NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIW 235 (396)
Q Consensus 156 ~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~ 235 (396)
.+..+..| .||||.|+. ++++++. +++
T Consensus 251 ~~~~~~~g-------------~t~L~~a~~---------------------------------~~~Ll~~-------~~n 277 (327)
T 1sw6_A 251 PNDKNGER-------------KDSILENLD---------------------------------LKWIIAN-------MLN 277 (327)
T ss_dssp ----------------------CHHHHHCS---------------------------------HHHHHHH-------TTT
T ss_pred cccccccC-------------CChhHHHHH---------------------------------HHHHHHh-------CCC
Confidence 22233333 889988763 2334432 488
Q ss_pred cccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCC
Q 037504 236 KFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLP 289 (396)
Q Consensus 236 ~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~ 289 (396)
.+|..|+||||+|+++|+.++|++|+++|++ ++.+|..|+||||+|++.|
T Consensus 278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad----~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 278 AQDSNGDTCLNIAARLGNISIVDALLDYGAD----PFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC----TTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCCHHHHHHhcC
Confidence 9999999999999999999999999999999 8999999999999999875
No 49
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=100.00 E-value=1.4e-33 Score=255.69 Aligned_cols=221 Identities=18% Similarity=0.169 Sum_probs=179.0
Q ss_pred CCCCccccccccCCCcc-cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504 2 AHSAPLELHVYSNPPVE-EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK 80 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~~-~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 80 (396)
||.+++++++..+++.. .+..|.||||+|+..|+.+++++|++. |++++.. |..|.||||+|+..|+.++|++|++.
T Consensus 51 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~ 128 (299)
T 1s70_B 51 GDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQP-DNEGWIPLHAAASCGYLDIAEYLISQ 128 (299)
T ss_dssp TCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhC
Confidence 56778888888776554 678899999999999999999999985 8999988 99999999999999999999999999
Q ss_pred hhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc--cC
Q 037504 81 MKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEG-NEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK--NS 157 (396)
Q Consensus 81 ~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~--~~ 157 (396)
| +++ +.+|..|.||||+|+..++.++++.|+.. +.+++ ..+..+.++++ ..+..++..+. ..
T Consensus 129 g--~~~--~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~---~~~~~~~~~~~--------~~~~~~l~~~~~~~~ 193 (299)
T 1s70_B 129 G--AHV--GAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE---AARKEEERIML--------RDARQWLNSGHINDV 193 (299)
T ss_dssp T--CCT--TCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHH---HHHHHHHHHHH--------HHHHHHHHHTCCCCC
T ss_pred C--CCC--CCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCch---hhhhhhhhHHH--------HHHHHHHhccCcchh
Confidence 8 776 89999999999999999999999988864 44422 11112223332 23444555554 22
Q ss_pred CCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccc
Q 037504 158 LKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKF 237 (396)
Q Consensus 158 ~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~ 237 (396)
..+..| .||||+|+..| ..++++.|+ ..+.+++.+
T Consensus 194 ~~~~~g-------------~t~L~~A~~~g---------------------------~~~~v~~Ll-----~~g~d~~~~ 228 (299)
T 1s70_B 194 RHAKSG-------------GTALHVAAAKG---------------------------YTEVLKLLI-----QARYDVNIK 228 (299)
T ss_dssp CCTTTC-------------CCHHHHHHHHT---------------------------CHHHHHHHH-----TTTCCTTCC
T ss_pred hhcCCC-------------CCHHHHHHHCC---------------------------cHHHHHHHH-----HcCCCCCCc
Confidence 233444 78999998888 356666555 357889999
Q ss_pred cCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504 238 DENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 238 d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..
T Consensus 229 d~~g~tpL~~A~~~~~~~~v~~Ll~~gad----~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 229 DYDGWTPLHAAAHWGKEEACRILVENLCD----MEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTTTSCCSG
T ss_pred CCCCCcHHHHHHhcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHH
Confidence 99999999999999999999999999999 889999999999999753
No 50
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.5e-33 Score=248.33 Aligned_cols=193 Identities=16% Similarity=0.112 Sum_probs=158.7
Q ss_pred CCchHHHHHHHcCCHH----HHHHHHHHhhhcccchhc----ccCCCCcHHHHHHHc---CCHHHHHHHHhcCCCCcccc
Q 037504 57 LGDTALHVAAAANRID----FVKKLVKKMKAENLDLAK----RNRIGCTALFYAAAS---GSVELVKATMEGNEDITMVP 125 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~----~v~~Ll~~~~~~~~d~~~----~d~~g~tpLh~A~~~---g~~~~v~~Ll~~g~~~~~~~ 125 (396)
.|+||||+|+..|+.+ ++++|++.+ .++ +. +|..|+||||+|+.. |+.+++++|++.|++++.+.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g--~~i--~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 76 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNS--KYL--TDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPK 76 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCT--TSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSS
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcC--CCc--ccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchh
Confidence 4899999999999997 556666677 666 87 899999999999999 99999999999998754322
Q ss_pred --------CCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCc
Q 037504 126 --------QDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPR 196 (396)
Q Consensus 126 --------~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~ 196 (396)
.+|..|.||||+|+..|+.+++++|++.++ .+..+..+ .+
T Consensus 77 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~-------------~~------------------ 125 (256)
T 2etb_A 77 PLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGR-------------FF------------------ 125 (256)
T ss_dssp CGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSG-------------GG------------------
T ss_pred hhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccc-------------cc------------------
Confidence 345689999999999999999999999987 33333322 00
Q ss_pred chhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh---hcccccccccc
Q 037504 197 GIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE---ISSVADLLFDS 273 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~---~g~~~~~~~n~ 273 (396)
+...+..|..|+||||+|+..|+.+++++|++ +|++ +|.
T Consensus 126 ----------------------------------~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~----~n~ 167 (256)
T 2etb_A 126 ----------------------------------QKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS----LEA 167 (256)
T ss_dssp ----------------------------------SCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----TTC
T ss_pred ----------------------------------cccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----cCc
Confidence 11223445679999999999999999999999 9999 899
Q ss_pred ccCCCCchhhhhhc--CCCCC-------ccccccchhHhHHHHHHHHHHHhhhcchhhh-------hhhcCCCCCchhhH
Q 037504 274 KDKDGNNILHLAGK--LPPLN-------RLNIVSVAALQLQRELLWFQEVKKVVPRKFA-------EEKNNDGLTPGDLF 337 (396)
Q Consensus 274 ~d~~g~TpLh~A~~--~~~~~-------~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~-------~~~~~~g~tpl~~a 337 (396)
+|..|+||||+|+. .++.+ ++++| +..|+++ +.+|..|+|||++|
T Consensus 168 ~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~L-------------------l~~ga~~~~~~~~~~~~d~~g~tpL~~A 228 (256)
T 2etb_A 168 TDSLGNTVLHALVMIADNSPENSALVIHMYDGL-------------------LQMGARLCPTVQLEEISNHQGLTPLKLA 228 (256)
T ss_dssp CCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHH-------------------HHHHHHHSTTCCGGGCCCTTSCCHHHHH
T ss_pred cCCCCCCHHHHHHHcccCCchhhHHHHHHHHHH-------------------HHcCCCcccccccccccCCCCCCHHHHH
Confidence 99999999999998 66655 55554 5578999 99999999999999
Q ss_pred HHHh
Q 037504 338 IKEH 341 (396)
Q Consensus 338 ~~~~ 341 (396)
.+..
T Consensus 229 ~~~g 232 (256)
T 2etb_A 229 AKEG 232 (256)
T ss_dssp HHTT
T ss_pred HHhC
Confidence 8753
No 51
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=100.00 E-value=2.3e-32 Score=227.10 Aligned_cols=170 Identities=19% Similarity=0.138 Sum_probs=147.9
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA 102 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A 102 (396)
+.||||.|+..|+.+.+++|++..+..++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A 76 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEWG--ADP--HILAKERESALSLA 76 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHT--CCT--TCCCTTCCCHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCc--hhhcccCCCHHHHH
Confidence 4689999999999999999999866667777 899999999999999999999999998 776 99999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHH
Q 037504 103 AASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHV 182 (396)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~ 182 (396)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 77 ~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga--------------------------- 126 (172)
T 3v30_A 77 STGGYTDIVGLLLERDVD---INIYDWNGGTPLLYAVRGNHVKCVEALLARGA--------------------------- 126 (172)
T ss_dssp HHTTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC---------------------------
T ss_pred HHCCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC---------------------------
Confidence 999999999999999999 56667799999999999999999999997664
Q ss_pred HHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 037504 183 LARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE 262 (396)
Q Consensus 183 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 262 (396)
+++.+|..|+||||+|+..|+.+++++|++
T Consensus 127 --------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~ 156 (172)
T 3v30_A 127 --------------------------------------------------DLTTEADSGYTPMDLAVALGYRKVQQVIEN 156 (172)
T ss_dssp --------------------------------------------------CTTCCCTTSCCHHHHHHHHTCHHHHHHHHH
T ss_pred --------------------------------------------------CccccCCCCCCHHHHHHHhCcHHHHHHHHH
Confidence 355678889999999999999999999999
Q ss_pred hccccccccccccCCCCch
Q 037504 263 ISSVADLLFDSKDKDGNNI 281 (396)
Q Consensus 263 ~g~~~~~~~n~~d~~g~Tp 281 (396)
+|++ +..++..|.||
T Consensus 157 ~~~~----~~~~~~~~~~p 171 (172)
T 3v30_A 157 HILK----LFQSNLVPADP 171 (172)
T ss_dssp HHHH----HSCC-------
T ss_pred HHHH----HhcccCCCCCC
Confidence 9998 77888888887
No 52
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=8.6e-33 Score=235.55 Aligned_cols=189 Identities=22% Similarity=0.226 Sum_probs=164.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+..+.||||.|+..|+.+.++.|++.+ . .+++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~~--~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~ 75 (201)
T 3hra_A 2 KTYEVGALLEAANQRDTKKVKEILQDT--T-YQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD---INLQNSISDSP 75 (201)
T ss_dssp -CCCTTHHHHHHHTTCHHHHHHHHTCT--T-CCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred CcccccHHHHHHHhccHHHHHHHHHcC--C-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCH
Confidence 467899999999999999999999986 3 23499999999999999999999999999999999 55567799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcc--cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhh
Q 037504 135 IVGAASLGHTEVVEFLYRETK--NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVEN 212 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (396)
||+|+..|+.+++++|++.+. .+..+..| .||||+|+..+
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g-------------~t~L~~A~~~~------------------------- 117 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHATPDLNKHNRYG-------------GNALIPAAEKG------------------------- 117 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHSCCCTTCCCTTS-------------CCSHHHHHHTT-------------------------
T ss_pred HHHHHHcCCHHHHHHHHhccCcccccccCCC-------------CcHHHHHHHcC-------------------------
Confidence 999999999999999996655 44455555 89999999988
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCc-----HHHHHHHHhhccccccccccccCCCCchhhhhhc
Q 037504 213 ERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRM-----REIFKFIFEISSVADLLFDSKDKDGNNILHLAGK 287 (396)
Q Consensus 213 ~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~-----~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~ 287 (396)
..++++++++ ..+.+++.+|..|+||||+|+..++ .+++++|+++|++ ++.+|..|+||||+|+.
T Consensus 118 --~~~~v~~Ll~----~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~ 187 (201)
T 3hra_A 118 --HIDNVKLLLE----DGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGAD----QSIKDNSGRTAMDYANQ 187 (201)
T ss_dssp --CHHHHHHHHH----HCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHH
T ss_pred --CHHHHHHHHH----cCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCC----CCccCCCCCCHHHHHHH
Confidence 3567766664 3457889999999999999999887 8999999999999 88999999999999999
Q ss_pred CCCCCccccc
Q 037504 288 LPPLNRLNIV 297 (396)
Q Consensus 288 ~~~~~~~~~l 297 (396)
.|+.+++++|
T Consensus 188 ~~~~~~~~~L 197 (201)
T 3hra_A 188 KGYTEISKIL 197 (201)
T ss_dssp HTCHHHHHHH
T ss_pred cCCHhHHHHH
Confidence 9998887776
No 53
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=100.00 E-value=7.1e-33 Score=242.33 Aligned_cols=205 Identities=13% Similarity=0.074 Sum_probs=172.3
Q ss_pred CCCCccccccccCC-----CcccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHH
Q 037504 2 AHSAPLELHVYSNP-----PVEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKK 76 (396)
Q Consensus 2 ~h~~~~~~~~~~~~-----~~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~ 76 (396)
|+.++++.++.... ....+..|.||||+|+..|+.++++.|++. |++++.+ +..|.||||+|+..|+.+++++
T Consensus 19 g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~ 96 (236)
T 1ikn_D 19 EEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELR-DFRGNTPLHLACEQGCLASVGV 96 (236)
T ss_dssp TCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCC-CTTCCCHHHHHHHHTCHHHHHH
T ss_pred CChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHH
Confidence 67788888887654 234677899999999999999999999975 8999988 9999999999999999999999
Q ss_pred HHHHhhhc--ccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCC-CCCcHHHHHHhcCCHHHHHHHHhh
Q 037504 77 LVKKMKAE--NLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDK-DRMLPIVGAASLGHTEVVEFLYRE 153 (396)
Q Consensus 77 Ll~~~~~~--~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ 153 (396)
|++.+... ...++..|..|.||||+|+..|+.+++++|+++|++ ++.++. .|.||||+|+..|+.+++++|+++
T Consensus 97 Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 173 (236)
T 1ikn_D 97 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD---VNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173 (236)
T ss_dssp HHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT
T ss_pred HHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Confidence 99988221 112378899999999999999999999999999999 555565 899999999999999999999976
Q ss_pred cccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcc
Q 037504 154 TKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDL 233 (396)
Q Consensus 154 ~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~ 233 (396)
|+ +
T Consensus 174 ga-----------------------------------------------------------------------------~ 176 (236)
T 1ikn_D 174 GA-----------------------------------------------------------------------------D 176 (236)
T ss_dssp TC-----------------------------------------------------------------------------C
T ss_pred CC-----------------------------------------------------------------------------C
Confidence 65 3
Q ss_pred cccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCC
Q 037504 234 IWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPP 290 (396)
Q Consensus 234 i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~ 290 (396)
++.+|..|+||||+|+.+|+.+++++|+++|++.. ....+.+|.||.+.+.....
T Consensus 177 ~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~--~~~~~~~~~~~~~~~~~~~~ 231 (236)
T 1ikn_D 177 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENL--QMLPESEDEESYDTESEFTE 231 (236)
T ss_dssp SCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGGG--SSCCCCCTTTCCCCC-----
T ss_pred CCcccCCCCCHHHHHHccCchHHHHHHHHcchhhh--hcCCccchHHHHhhhccccc
Confidence 56678889999999999999999999999999853 45789999999998876543
No 54
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=7.4e-33 Score=247.92 Aligned_cols=187 Identities=18% Similarity=0.232 Sum_probs=142.2
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCC-CCccccCCCCCCCcHH
Q 037504 57 LGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNE-DITMVPQDDKDRMLPI 135 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~d~~g~tpL 135 (396)
...+++|.|+..|+.+.++.+++.+ .+..+|.+|..|+||||+|+..|+.+++++|++.|+ + ++..|..|.|||
T Consensus 75 ~~~~~l~~a~~~~~~~~~~~l~~~~--~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~---~~~~~~~g~tpL 149 (276)
T 4hbd_A 75 ACRSDAHPELVRRHLVTFRAMSARL--LDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCK---VDKQNRAGYSPI 149 (276)
T ss_dssp HHSTTCCHHHHHHHHHHHHHHCHHH--HHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCC---TTCCCTTSCCHH
T ss_pred HhccCCCHHHHHHHHHHHHHHHHHH--HhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCc---CCCCCCCCCCHH
Confidence 3556777777777777777777776 443347777777777777777777777777777776 5 445566777777
Q ss_pred HHHH-----hcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchh
Q 037504 136 VGAA-----SLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKA 209 (396)
Q Consensus 136 h~A~-----~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (396)
|+|+ ..++.+++++|++.+. ....+..| .||||+|+..|
T Consensus 150 ~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g-------------~tpLh~A~~~g---------------------- 194 (276)
T 4hbd_A 150 MLTALATLKTQDDIETVLQLFRLGNINAKASQAG-------------QTALMLAVSHG---------------------- 194 (276)
T ss_dssp HHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC-------------CCHHHHHHHTT----------------------
T ss_pred HHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC-------------CCHHHHHHHcC----------------------
Confidence 7777 5567777777777776 33344445 67777777777
Q ss_pred hhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh-hccccccccccccCCCCchhhhhhcC
Q 037504 210 VENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE-ISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 210 ~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~-~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
..++++.|++ .+.+++.+|.+|+||||+|+..|+.+++++|++ .|++ ++.+|..|+||||+|+..
T Consensus 195 -----~~~~v~~Ll~-----~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad----~~~~d~~g~TpL~~A~~~ 260 (276)
T 4hbd_A 195 -----RVDVVKALLA-----CEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCD----ISLTDRDGSTALMVALDA 260 (276)
T ss_dssp -----CHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCC----TTCCCTTSCCHHHHHHHH
T ss_pred -----CHHHHHHHHh-----CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCC----CcCcCCCCCCHHHHHHHc
Confidence 2555555543 467788889999999999999999999999999 8998 888999999999999999
Q ss_pred CCCCccccc
Q 037504 289 PPLNRLNIV 297 (396)
Q Consensus 289 ~~~~~~~~l 297 (396)
|+.+++++|
T Consensus 261 g~~~iv~~L 269 (276)
T 4hbd_A 261 GQSEIASML 269 (276)
T ss_dssp TCHHHHHHH
T ss_pred CCHHHHHHH
Confidence 998888776
No 55
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.4e-33 Score=245.37 Aligned_cols=188 Identities=14% Similarity=0.074 Sum_probs=144.7
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
.+..|.||||+|+..|+.++|+.|++. |.+++.+ |..|+||||+|+..|+.+++++|++.| +++ +.+|..|+||
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~g--a~~--n~~d~~g~tp 90 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQP-NEEGITALHNAICGANYSIVDFLITAG--ANV--NSPDSHGWTP 90 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCCH
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCCH
Confidence 456677888888888888888888875 7778777 788888888888888888888888877 665 7888888888
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCC-CCCCcHHHHH--HhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccc
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDD-KDRMLPIVGA--ASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDS 175 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~tpLh~A--~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~ 175 (396)
||+|+..|+.+++++|+++|++++ ..+ ..|+||||+| +..|+.+++++|++.|+
T Consensus 91 Lh~A~~~g~~~~v~~Ll~~ga~~~---~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga-------------------- 147 (229)
T 2vge_A 91 LHCAASCNDTVICMALVQHGAAIF---ATTLSDGATAFEKCDPYREGYADCATYLADVEQ-------------------- 147 (229)
T ss_dssp HHHHHHTTCHHHHHHHHTTTCCTT---CCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHH--------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCCCcc---cccCCCCCCHHHHHHHHhcChHHHHHHHHHcCC--------------------
Confidence 888888888888888888888843 333 3788888888 78888888888887766
Q ss_pred hhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHH
Q 037504 176 YETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMRE 255 (396)
Q Consensus 176 ~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~ 255 (396)
+++..|..|.||+|.++..+.
T Consensus 148 ---------------------------------------------------------~~~~~~~~~~~~l~~~~~~~~-- 168 (229)
T 2vge_A 148 ---------------------------------------------------------SMGLMNSGAVYALWDYSAEFG-- 168 (229)
T ss_dssp ---------------------------------------------------------HTTTSGGGEEEESSCBCCSST--
T ss_pred ---------------------------------------------------------CcccccCCchHHHHHHhhccc--
Confidence 233344455566654433332
Q ss_pred HHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 256 IFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 256 ~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
.++|++.|++.+ ++.+|..|+||||+|+..|+.++++..
T Consensus 169 -~~~ll~~ga~~~--~~~~d~~G~TpL~~A~~~g~~~~v~~~ 207 (229)
T 2vge_A 169 -DELSFREGESVT--VLRRDGPEETDWWWAALHGQEGYVPRN 207 (229)
T ss_dssp -TBCCBCTTCEEE--EEESSCTTCSSEEEEEETTEEEEEEGG
T ss_pred -cccCcccccccc--ccccCCCcccHHHHHHHcCCcceeehh
Confidence 257788888865 678999999999999999999988764
No 56
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.9e-32 Score=225.08 Aligned_cols=170 Identities=22% Similarity=0.206 Sum_probs=146.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHH
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVG 137 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~ 137 (396)
+.||||.|+..|+.+++++|++.+ .. +++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~--~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKG--DN-LVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD---PHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTC--SG-GGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcC--cc-cccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---chhhcccCCCHHHH
Confidence 568999999999999999999987 44 1488999999999999999999999999999999 55667789999999
Q ss_pred HHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHH
Q 037504 138 AASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALE 217 (396)
Q Consensus 138 A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
|+..|+.+++++|++.++
T Consensus 76 A~~~~~~~~v~~Ll~~g~-------------------------------------------------------------- 93 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDV-------------------------------------------------------------- 93 (172)
T ss_dssp HHHTTCHHHHHHHHTTTC--------------------------------------------------------------
T ss_pred HHHCCCHHHHHHHHHcCC--------------------------------------------------------------
Confidence 999999999999997654
Q ss_pred HHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 218 LVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 218 ~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..++.+++++|
T Consensus 94 ---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~~~~~~~~~L 154 (172)
T 3v30_A 94 ---------------DINIYDWNGGTPLLYAVRGNHVKCVEALLARGAD----LTTEADSGYTPMDLAVALGYRKVQQVI 154 (172)
T ss_dssp ---------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH
T ss_pred ---------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----ccccCCCCCCHHHHHHHhCcHHHHHHH
Confidence 3556788899999999999999999999999999 889999999999999999999988887
Q ss_pred cchhHhHHHHHHHHHHHhhhcchhhhhhhcCCCCCc
Q 037504 298 SVAALQLQRELLWFQEVKKVVPRKFAEEKNNDGLTP 333 (396)
Q Consensus 298 ~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g~tp 333 (396)
+.+++++..++..|.||
T Consensus 155 -------------------~~~~~~~~~~~~~~~~p 171 (172)
T 3v30_A 155 -------------------ENHILKLFQSNLVPADP 171 (172)
T ss_dssp -------------------HHHHHHHSCC-------
T ss_pred -------------------HHHHHHHhcccCCCCCC
Confidence 66788889999999888
No 57
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=1.1e-31 Score=227.02 Aligned_cols=160 Identities=19% Similarity=0.229 Sum_probs=127.6
Q ss_pred ccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCC
Q 037504 49 EIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDD 128 (396)
Q Consensus 49 ~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d 128 (396)
.++.+ |..|+||||+|+..|+.+++++|++.+ .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|
T Consensus 27 ~~n~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~~--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~ 98 (192)
T 2rfm_A 27 LRNYR-DSYNRTPLMVACMLGMENAIDKLVENF--DKL--EDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN---VNTKD 98 (192)
T ss_dssp HHTCC-CTTCCCHHHHHHHHTCGGGHHHHHHHH--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC---TTCCC
T ss_pred HHhCc-CCCCCCHHHHHHHcCCHHHHHHHHHhc--ccc--ccccccCccHHHHHHHcCCHHHHHHHHHCCCC---CCCCC
Confidence 34555 888899999999999999999998887 666 88888889999999999999999999988888 55566
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccch
Q 037504 129 KDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK 208 (396)
Q Consensus 129 ~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
..|.||||+|+..|+.+++++|++.++
T Consensus 99 ~~g~t~L~~A~~~~~~~~v~~Ll~~g~----------------------------------------------------- 125 (192)
T 2rfm_A 99 FSGKTPLMWSIIFGYSEMSYFLLEHGA----------------------------------------------------- 125 (192)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTC-----------------------------------------------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHCCC-----------------------------------------------------
Confidence 788899999988888888888887654
Q ss_pred hhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504 209 AVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 209 ~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..
T Consensus 126 ------------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~A~~~ 177 (192)
T 2rfm_A 126 ------------------------NVNDRNLEGETPLIVASKYGRSEIVKKLLELGAD----ISARDLTGLTAEASARIF 177 (192)
T ss_dssp ------------------------CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC----TTCBCTTSCBHHHHHHHT
T ss_pred ------------------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----CCCcCCCCCCHHHHHHHh
Confidence 2445566777788888877777888888877777 677777788888888777
Q ss_pred CCCCccccc
Q 037504 289 PPLNRLNIV 297 (396)
Q Consensus 289 ~~~~~~~~l 297 (396)
|+.+++++|
T Consensus 178 ~~~~~v~~L 186 (192)
T 2rfm_A 178 GRQEVIKIF 186 (192)
T ss_dssp TCHHHHHHH
T ss_pred CcHHHHHHH
Confidence 777766665
No 58
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=2.7e-31 Score=218.24 Aligned_cols=159 Identities=23% Similarity=0.300 Sum_probs=142.2
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY 101 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~ 101 (396)
...||||.|+..|+.++++.|++. +.+++.. +..|.||||+|+. |+.+++++|++.| .++ +.+|..|.||||+
T Consensus 4 ~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~ 76 (162)
T 1ihb_A 4 PWGNELASAAARGDLEQLTSLLQN-NVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLRG--ANP--DLKDRTGFAVIHD 76 (162)
T ss_dssp -CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHTT--CCT--TCCCTTSCCHHHH
T ss_pred hHhhHHHHHHHcCCHHHHHHHHhC-CCCcccc-CccCccHHHHHHc-CcHHHHHHHHHcC--CCC--CCCCCCCCCHHHH
Confidence 457999999999999999999974 8899888 8999999999999 9999999999998 776 8999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHH
Q 037504 102 AAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALH 181 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~ 181 (396)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++.
T Consensus 77 A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------- 128 (162)
T 1ihb_A 77 AARAGFLDTLQTLLEFQAD---VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS------------------------- 128 (162)
T ss_dssp HHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCC-------------------------
T ss_pred HHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCC-------------------------
Confidence 9999999999999999998 566677999999999999999999999987751
Q ss_pred HHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHH
Q 037504 182 VLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIF 261 (396)
Q Consensus 182 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll 261 (396)
.++.+|..|.||||+|+..|+.+++++|+
T Consensus 129 ---------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll 157 (162)
T 1ihb_A 129 ---------------------------------------------------NVGHRNHKGDTACDLARLYGRNEVVSLMQ 157 (162)
T ss_dssp ---------------------------------------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred ---------------------------------------------------CCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 14566788999999999999999999999
Q ss_pred hhccc
Q 037504 262 EISSV 266 (396)
Q Consensus 262 ~~g~~ 266 (396)
++|+|
T Consensus 158 ~~GAd 162 (162)
T 1ihb_A 158 ANGAG 162 (162)
T ss_dssp HTC--
T ss_pred HhCCC
Confidence 99985
No 59
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.97 E-value=4.2e-31 Score=223.49 Aligned_cols=160 Identities=23% Similarity=0.227 Sum_probs=147.4
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
.+..|.||||+|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||
T Consensus 31 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~ 104 (192)
T 2rfm_A 31 RDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKG--SNV--NTKDFSGKTP 104 (192)
T ss_dssp CCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHT--CCT--TCCCTTSCCH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccc-cccCccHHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCcH
Confidence 578899999999999999999999986 8888888 899999999999999999999999998 776 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhh
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYET 178 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t 178 (396)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga----------------------- 158 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGAN---VNDRNLEGETPLIVASKYGRSEIVKKLLELGA----------------------- 158 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-----------------------
T ss_pred HHHHHHcCCHHHHHHHHHCCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----------------------
Confidence 9999999999999999999999 56667799999999999999999999997664
Q ss_pred HHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHH
Q 037504 179 ALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFK 258 (396)
Q Consensus 179 ~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~ 258 (396)
+++.+|..|.||||+|+..|+.++++
T Consensus 159 ------------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~v~ 184 (192)
T 2rfm_A 159 ------------------------------------------------------DISARDLTGLTAEASARIFGRQEVIK 184 (192)
T ss_dssp ------------------------------------------------------CTTCBCTTSCBHHHHHHHTTCHHHHH
T ss_pred ------------------------------------------------------CCCCcCCCCCCHHHHHHHhCcHHHHH
Confidence 35567888999999999999999999
Q ss_pred HHHhhc
Q 037504 259 FIFEIS 264 (396)
Q Consensus 259 ~Ll~~g 264 (396)
+|+++|
T Consensus 185 ~Ll~~~ 190 (192)
T 2rfm_A 185 IFTEVR 190 (192)
T ss_dssp HHHHHH
T ss_pred HHHhcc
Confidence 999876
No 60
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=9.4e-31 Score=216.20 Aligned_cols=159 Identities=20% Similarity=0.173 Sum_probs=140.2
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY 101 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~ 101 (396)
.|.||||.|+..|+.+++++|++. +.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~ 75 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQNG--ADP--QLLGKGRESALSL 75 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCCHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcC--CCC--CCcCCCCCcHHHH
Confidence 478999999999999999999987 7888887 889999999999999999999999987 666 8889999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHH
Q 037504 102 AAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALH 181 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~ 181 (396)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 76 A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------------- 126 (167)
T 3v31_A 76 ACSKGYTDIVKMLLDCGVD---VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA-------------------------- 126 (167)
T ss_dssp HHHHTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--------------------------
T ss_pred HHHcCCHHHHHHHHHCCCC---CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------------------
Confidence 9999999999999999998 55667789999999999999999999987654
Q ss_pred HHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHH
Q 037504 182 VLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIF 261 (396)
Q Consensus 182 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll 261 (396)
+++.+|..|.||||+|+..|+.+++++|+
T Consensus 127 ---------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~~~~L~ 155 (167)
T 3v31_A 127 ---------------------------------------------------DPTIETDSGYNSMDLAVALGYRSVQQVIE 155 (167)
T ss_dssp ---------------------------------------------------CTTCCCTTSCCHHHHHHHHTCHHHHHHHH
T ss_pred ---------------------------------------------------CCCCcCCCCCCHHHHHHHcCcHHHHHHHH
Confidence 34556788999999999999999999999
Q ss_pred hhccc
Q 037504 262 EISSV 266 (396)
Q Consensus 262 ~~g~~ 266 (396)
+++.+
T Consensus 156 ~~~~~ 160 (167)
T 3v31_A 156 SHLLK 160 (167)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 61
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=1.4e-30 Score=215.65 Aligned_cols=161 Identities=24% Similarity=0.340 Sum_probs=138.1
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
.....+.++|++|++.|+.++|++|++. +.+++.. |..|.||||+|+..|+.+++++|++.| .++ +.+|..|.|
T Consensus 9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t 82 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGRDDEVRILMAN-GADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKNG--ADV--NAVDHAGMT 82 (169)
T ss_dssp ----CHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCC
T ss_pred cCCCcccchHHHHHHcCCHHHHHHHHHC-CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CccCCCCCC
Confidence 3566678999999999999999999985 8888887 889999999999999999999999987 666 889999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchh
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYE 177 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~ 177 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++++
T Consensus 83 ~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~---------------------- 137 (169)
T 2y1l_E 83 PLRLAALFGHLEIVEVLLKNGAD---VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGA---------------------- 137 (169)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC----------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC----------------------
Confidence 99999999999999999999998 55667789999999999999999999987654
Q ss_pred hHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHH
Q 037504 178 TALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIF 257 (396)
Q Consensus 178 t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v 257 (396)
+++.+|..|.||||+|+..|+.+++
T Consensus 138 -------------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 138 -------------------------------------------------------DVNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp -------------------------------------------------------CTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred -------------------------------------------------------CCCCcCCCCCCHHHHHHHhCCHHHH
Confidence 2456678899999999999999999
Q ss_pred HHHHhhc
Q 037504 258 KFIFEIS 264 (396)
Q Consensus 258 ~~Ll~~g 264 (396)
++|++.|
T Consensus 163 ~~L~~~G 169 (169)
T 2y1l_E 163 EILQKLN 169 (169)
T ss_dssp HHHHTC-
T ss_pred HHHHHcC
Confidence 9998875
No 62
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=8e-31 Score=234.44 Aligned_cols=199 Identities=18% Similarity=0.202 Sum_probs=152.8
Q ss_pred CCCCccccccc----cCCCc-----ccccccchHHHHHHHc---CCHHHHHHHHHhCccc-------ccc----ccCCCC
Q 037504 2 AHSAPLELHVY----SNPPV-----EEIRTRRLKLYRVALN---GDWARAKVIYDEHKDE-------IGD----VITRLG 58 (396)
Q Consensus 2 ~h~~~~~~~~~----~~~~~-----~~~~~g~t~Lh~A~~~---g~~~~v~~ll~~~~~~-------~~~----~~~~~g 58 (396)
|+.++++.++. .+..+ ..+..|.||||+|+.. |+.++++.|++. +++ ++. . |..|
T Consensus 24 g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~-d~~g 101 (273)
T 2pnn_A 24 SNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDS-YYKG 101 (273)
T ss_dssp TCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCST-TTTT
T ss_pred CCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccc-cCCC
Confidence 67788887775 23322 3478899999999987 999999999986 544 232 3 6789
Q ss_pred chHHHHHHHcCCHHHHHHHHHHhhhcccchhcccC--------------CCCcHHHHHHHcCCHHHHHHHHh---cCCCC
Q 037504 59 DTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNR--------------IGCTALFYAAASGSVELVKATME---GNEDI 121 (396)
Q Consensus 59 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~--------------~g~tpLh~A~~~g~~~~v~~Ll~---~g~~~ 121 (396)
.||||+|+..|+.++|++|++.| +++ +.++. .|.||||+|+..|+.+++++|++ +|++
T Consensus 102 ~tpL~~A~~~g~~~~v~~Ll~~g--a~~--~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad- 176 (273)
T 2pnn_A 102 QTALHIAIERRNMTLVTLLVENG--ADV--QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPAD- 176 (273)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCC-
T ss_pred CCHHHHHHHcCCHHHHHHHHHCC--CCc--CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCC-
Confidence 99999999999999999999998 776 88876 79999999999999999999999 8999
Q ss_pred ccccCCCCCCCcHHHHHHhcCC---------HHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCC
Q 037504 122 TMVPQDDKDRMLPIVGAASLGH---------TEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSN 192 (396)
Q Consensus 122 ~~~~~~d~~g~tpLh~A~~~~~---------~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~ 192 (396)
++.+|..|+||||+|+..|+ .+++++|++.|+ ++.
T Consensus 177 --~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga-~~n--------------------------------- 220 (273)
T 2pnn_A 177 --ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGA-KLH--------------------------------- 220 (273)
T ss_dssp --TTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHH-HHC---------------------------------
T ss_pred --ceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhh-hcc---------------------------------
Confidence 56678899999999999887 677777777665 000
Q ss_pred CCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcc-cccccc
Q 037504 193 QNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISS-VADLLF 271 (396)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~-~~~~~~ 271 (396)
.....++.+|..|+||||+|+..|+.+++++|+++|+ | .
T Consensus 221 ------------------------------------~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d----p 260 (273)
T 2pnn_A 221 ------------------------------------PTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHE----P 260 (273)
T ss_dssp ------------------------------------TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC------
T ss_pred ------------------------------------cccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCC----c
Confidence 0011235678999999999999999999999999999 5 4
Q ss_pred ccccCCCCchhh
Q 037504 272 DSKDKDGNNILH 283 (396)
Q Consensus 272 n~~d~~g~TpLh 283 (396)
......+.+|-|
T Consensus 261 ~~~~~~~~~~~~ 272 (273)
T 2pnn_A 261 ECRHAAAHHHHH 272 (273)
T ss_dssp ------------
T ss_pred hhhhhhhhhccC
Confidence 556666666543
No 63
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.97 E-value=5.9e-32 Score=235.04 Aligned_cols=191 Identities=15% Similarity=0.101 Sum_probs=156.4
Q ss_pred HHHHHHhCccccccc--cCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHh
Q 037504 39 AKVIYDEHKDEIGDV--ITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATME 116 (396)
Q Consensus 39 v~~ll~~~~~~~~~~--~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 116 (396)
++.||++ +.+++.. .+..|.||||+|+..|+.++|++|++.| +++ +.+|..|+||||+|+..|+.+++++|++
T Consensus 1 v~~ll~~-~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~d~~g~tpLh~A~~~g~~~~v~~Ll~ 75 (229)
T 2vge_A 1 MRSVLRK-AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEM--NDP--SQPNEEGITALHNAICGANYSIVDFLIT 75 (229)
T ss_dssp ----------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHS--SCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred Ceehhcc-CCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcC--CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 3556665 5554432 2567889999999999999999999998 766 9999999999999999999999999999
Q ss_pred cCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCc
Q 037504 117 GNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPR 196 (396)
Q Consensus 117 ~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~ 196 (396)
+|++ ++.+|..|+||||+|+..|+.+++++|++.++
T Consensus 76 ~ga~---~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga----------------------------------------- 111 (229)
T 2vge_A 76 AGAN---VNSPDSHGWTPLHCAASCNDTVICMALVQHGA----------------------------------------- 111 (229)
T ss_dssp TTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTC-----------------------------------------
T ss_pred CCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----------------------------------------
Confidence 9999 56667799999999999999999999998765
Q ss_pred chhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCccccccc-CCCCcHHHHH--HHcCcHHHHHHHHhhcccccccccc
Q 037504 197 GIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFD-ENGHTIFHIA--VSNRMREIFKFIFEISSVADLLFDS 273 (396)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d-~~g~t~Lh~A--~~~~~~~~v~~Ll~~g~~~~~~~n~ 273 (396)
+++.++ ..|+||||+| +..|+.+++++|+++|++ ++.
T Consensus 112 ------------------------------------~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~----~~~ 151 (229)
T 2vge_A 112 ------------------------------------AIFATTLSDGATAFEKCDPYREGYADCATYLADVEQS----MGL 151 (229)
T ss_dssp ------------------------------------CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHH----TTT
T ss_pred ------------------------------------CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCC----ccc
Confidence 234444 5899999999 999999999999999999 889
Q ss_pred ccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhcchhh--hhhhcCCCCCchhhHHHH
Q 037504 274 KDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVVPRKF--AEEKNNDGLTPGDLFIKE 340 (396)
Q Consensus 274 ~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~--~~~~~~~g~tpl~~a~~~ 340 (396)
+|..|.||||.++.....+ +| +..|++ ++.+|..|+|||++|...
T Consensus 152 ~~~~~~~~l~~~~~~~~~~---~l-------------------l~~ga~~~~~~~d~~G~TpL~~A~~~ 198 (229)
T 2vge_A 152 MNSGAVYALWDYSAEFGDE---LS-------------------FREGESVTVLRRDGPEETDWWWAALH 198 (229)
T ss_dssp SGGGEEEESSCBCCSSTTB---CC-------------------BCTTCEEEEEESSCTTCSSEEEEEET
T ss_pred ccCCchHHHHHHhhccccc---cC-------------------ccccccccccccCCCcccHHHHHHHc
Confidence 9999999999777665433 33 556766 778999999999999754
No 64
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=8.8e-31 Score=218.97 Aligned_cols=169 Identities=16% Similarity=0.167 Sum_probs=149.7
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504 21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF 100 (396)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh 100 (396)
..+.++||.|+..|+.++|+.|++..+.+++.. +..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~ 77 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMRG--ARI--NVMNRGDDTPLH 77 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHcC--CCC--CCcCCCCCCHHH
Confidence 357899999999999999999999888888888 999999999999999999999999998 776 899999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHH
Q 037504 101 YAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETAL 180 (396)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L 180 (396)
+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 78 ~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga------------------------- 129 (179)
T 3f6q_A 78 LAASHGHRDIVQKLLQYKAD---INAVNEHGNVPLHYACFWGQDQVAEDLVANGA------------------------- 129 (179)
T ss_dssp HHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------------
T ss_pred HHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHCCC-------------------------
Confidence 99999999999999999999 56667799999999999999999999997665
Q ss_pred HHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHH
Q 037504 181 HVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFI 260 (396)
Q Consensus 181 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~L 260 (396)
+++.+|..|.||||+|+..++.+++++|
T Consensus 130 ----------------------------------------------------~~~~~~~~g~tpl~~A~~~~~~~~~~~L 157 (179)
T 3f6q_A 130 ----------------------------------------------------LVSICNKYGEMPVDKAKAPLRELLRERA 157 (179)
T ss_dssp ----------------------------------------------------CSSBCCTTSCCGGGGSCHHHHHHHHHHH
T ss_pred ----------------------------------------------------CcchhccCCCCcHHHHHHHHHHHHHHHH
Confidence 3556788899999999999999999999
Q ss_pred HhhccccccccccccCCC
Q 037504 261 FEISSVADLLFDSKDKDG 278 (396)
Q Consensus 261 l~~g~~~~~~~n~~d~~g 278 (396)
+++|++ ++..+..+
T Consensus 158 ~~~g~~----~~~~~~~~ 171 (179)
T 3f6q_A 158 EKMGQN----LNRIPYKD 171 (179)
T ss_dssp HHTTCC----CSCBCCCC
T ss_pred HHhhcC----cccCCccc
Confidence 999999 66655543
No 65
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.97 E-value=9.7e-32 Score=238.60 Aligned_cols=196 Identities=16% Similarity=0.135 Sum_probs=154.7
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHH----Hhhhcccchhccc----CCCCcHHHHHH---HcCCHHHHHHHHhcCCCCcc
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVK----KMKAENLDLAKRN----RIGCTALFYAA---ASGSVELVKATMEGNEDITM 123 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~----~~~~~~~d~~~~d----~~g~tpLh~A~---~~g~~~~v~~Ll~~g~~~~~ 123 (396)
+..|+|+||.|++.|+.+.++.|++ .+ .++ +..+ ..|.||||+|+ +.|+.+++++|++.|++...
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~--~~~--~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~ 77 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHK--KRL--TDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGN 77 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHT--CCT--TSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhcC--CCc--chhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccc
Confidence 5789999999999999996555555 66 555 6554 77999999999 77999999999999865221
Q ss_pred --------ccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCC
Q 037504 124 --------VPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQN 194 (396)
Q Consensus 124 --------~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~ 194 (396)
+...|..|+||||+|+..|+.+++++|++.++ .+..+..+
T Consensus 78 ~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~------------------------------- 126 (260)
T 3jxi_A 78 MREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR------------------------------- 126 (260)
T ss_dssp HHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEEC-------------------------------
T ss_pred hHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCcccccc-------------------------------
Confidence 44456689999999999999999999999987 22222211
Q ss_pred CcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh---hcccccccc
Q 037504 195 PRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE---ISSVADLLF 271 (396)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~---~g~~~~~~~ 271 (396)
...+.+.+..+..|+||||+|+..|+.+++++|++ +|++ +
T Consensus 127 ---------------------------------~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~----~ 169 (260)
T 3jxi_A 127 ---------------------------------FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQAD----L 169 (260)
T ss_dssp ---------------------------------CCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCC----T
T ss_pred ---------------------------------ccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCC----C
Confidence 00112233445789999999999999999999999 8999 8
Q ss_pred ccccCCCCchhhhhhcCCCC---------CccccccchhHhHHHHHHHHHHHhhhcchhhh-------hhhcCCCCCchh
Q 037504 272 DSKDKDGNNILHLAGKLPPL---------NRLNIVSVAALQLQRELLWFQEVKKVVPRKFA-------EEKNNDGLTPGD 335 (396)
Q Consensus 272 n~~d~~g~TpLh~A~~~~~~---------~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~-------~~~~~~g~tpl~ 335 (396)
|.+|..|+||||+|+..++. +++++| +..|+++ +.+|..|+|||+
T Consensus 170 ~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~L-------------------l~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 170 RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLL-------------------LIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHH-------------------HHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHH-------------------HHhCcccccccchhhcccCCCCCHHH
Confidence 99999999999999987762 334333 4478888 789999999999
Q ss_pred hHHHHh
Q 037504 336 LFIKEH 341 (396)
Q Consensus 336 ~a~~~~ 341 (396)
+|.+..
T Consensus 231 ~A~~~g 236 (260)
T 3jxi_A 231 MAAKTG 236 (260)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 998753
No 66
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.97 E-value=7.9e-31 Score=216.64 Aligned_cols=153 Identities=22% Similarity=0.252 Sum_probs=140.8
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHH
Q 037504 57 LGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIV 136 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh 136 (396)
.|.||||.|+..|+.+++++|++.+ .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQE--NVI--NHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD---PQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHS--SCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcC--CCc--CCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCcCCCCCcHHH
Confidence 5899999999999999999999998 666 99999999999999999999999999999999 5556778999999
Q ss_pred HHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHH
Q 037504 137 GAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERAL 216 (396)
Q Consensus 137 ~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (396)
+|+..|+.+++++|++.++
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~------------------------------------------------------------- 93 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGV------------------------------------------------------------- 93 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTC-------------------------------------------------------------
T ss_pred HHHHcCCHHHHHHHHHCCC-------------------------------------------------------------
Confidence 9999999999999997664
Q ss_pred HHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccc
Q 037504 217 ELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNI 296 (396)
Q Consensus 217 ~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~ 296 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++
T Consensus 94 ----------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~~~ 153 (167)
T 3v31_A 94 ----------------DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGAD----PTIETDSGYNSMDLAVALGYRSVQQV 153 (167)
T ss_dssp ----------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHH
T ss_pred ----------------CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHcCcHHHHHH
Confidence 3556788899999999999999999999999999 88999999999999999999998887
Q ss_pred c
Q 037504 297 V 297 (396)
Q Consensus 297 l 297 (396)
|
T Consensus 154 L 154 (167)
T 3v31_A 154 I 154 (167)
T ss_dssp H
T ss_pred H
Confidence 7
No 67
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=8.9e-31 Score=215.89 Aligned_cols=129 Identities=22% Similarity=0.266 Sum_probs=107.9
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
.+..|.|+||.|+..|+.++++.|++..+.+++.. +..|.||||+|+..|+.+++++|++.| .++ +.+|..|+||
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~ 78 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHG--ADV--HAKDKGGLVP 78 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCH
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhcC--CCC--CccCCCCCCH
Confidence 35667889999999999999999888767777666 788889999999999999999999887 666 8888889999
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 132 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGAV---VNVADLWKFTPLHEAAAKGKYEICKLLLQHGA 132 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHHHHHcCcHHHHHHHHhCCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 9999999999999999999888 55566788899999999998888888887654
No 68
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.97 E-value=1.1e-31 Score=235.22 Aligned_cols=183 Identities=17% Similarity=0.172 Sum_probs=127.9
Q ss_pred cccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHH
Q 037504 21 RTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALF 100 (396)
Q Consensus 21 ~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh 100 (396)
..|.||||.|++.|+.+.++.|++. |.+++. +..|.||||.|+..|+.++|++|++.| +++ +.+|..|+||||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~d~~g~t~L~ 75 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAH-GMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEV--DDP--SLPNDEGITALH 75 (239)
T ss_dssp -------------------------------------CHHHHHHHHHHTCHHHHHHHTSTT--SSC--CCCCTTSCCHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhcc-CCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcC--CCC--CCcCCCCCCHHH
Confidence 4689999999999999999999975 888874 478999999999999999999999988 666 999999999999
Q ss_pred HHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHH
Q 037504 101 YAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETAL 180 (396)
Q Consensus 101 ~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L 180 (396)
+|+..|+.+++++|+++|++ ++.+|..|+||||+|+..|+.+++++|+++++
T Consensus 76 ~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga------------------------- 127 (239)
T 1ycs_B 76 NAVCAGHTEIVKFLVQFGVN---VNAADSDGWTPLHCAASCNNVQVCKFLVESGA------------------------- 127 (239)
T ss_dssp HHHHHTCHHHHHHHHHHTCC---TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC-------------------------
T ss_pred HHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------------
Confidence 99999999999999999999 56677799999999999999999999998765
Q ss_pred HHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCC-cHHHHH--HHcCcHHHH
Q 037504 181 HVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGH-TIFHIA--VSNRMREIF 257 (396)
Q Consensus 181 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~-t~Lh~A--~~~~~~~~v 257 (396)
+++.++..|. ||||+| +..|+.+++
T Consensus 128 ----------------------------------------------------~~~~~~~~~~~t~l~~a~~~~~g~~~~~ 155 (239)
T 1ycs_B 128 ----------------------------------------------------AVFAMTYSDMQTAADKCEEMEEGYTQCS 155 (239)
T ss_dssp ----------------------------------------------------CTTCCCSSSCCCHHHHCCSSSTTCCCHH
T ss_pred ----------------------------------------------------CcceecCCCCcchHHHHHHhhhccHHHH
Confidence 2445555555 999999 788999999
Q ss_pred HHHHhhccccccc-----cccccCCCCchhhhhhcCCC
Q 037504 258 KFIFEISSVADLL-----FDSKDKDGNNILHLAGKLPP 290 (396)
Q Consensus 258 ~~Ll~~g~~~~~~-----~n~~d~~g~TpLh~A~~~~~ 290 (396)
++|+++|++.+.. ....|..+.+|++++.+.|.
T Consensus 156 ~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~ 193 (239)
T 1ycs_B 156 QFLYGVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD 193 (239)
T ss_dssp HHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred HHHHHhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence 9999999984320 11127789999999999886
No 69
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.97 E-value=7.5e-30 Score=208.25 Aligned_cols=154 Identities=24% Similarity=0.295 Sum_probs=138.7
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA 102 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A 102 (396)
+.||||.|+..|+.++++.|++..+.+++.. +..|.||||+ +..|+.+++++|++.| +++ +.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A 75 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQG--ASP--NVQDTSGTSPVHDA 75 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhhCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHCC--CCC--CCcCCCCCCHHHHH
Confidence 5799999999999999999999856688887 8999999999 9999999999999998 776 99999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHH
Q 037504 103 AASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHV 182 (396)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~ 182 (396)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++. +
T Consensus 76 ~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~--------------------------- 124 (156)
T 1bd8_A 76 ARTGFLDTLKVLVEHGAD---VNVPDGTGALPIHLAVQEGHTAVVSFLAAE-S--------------------------- 124 (156)
T ss_dssp HHTTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-S---------------------------
T ss_pred HHcCcHHHHHHHHHcCCC---CCCcCCCCCcHHHHHHHhChHHHHHHHHhc-c---------------------------
Confidence 999999999999999998 566677999999999999999999999865 3
Q ss_pred HHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHh
Q 037504 183 LARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFE 262 (396)
Q Consensus 183 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~ 262 (396)
+++.+|..|.||||+|+..|+.+++++|++
T Consensus 125 --------------------------------------------------~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 125 --------------------------------------------------DLHRRDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp --------------------------------------------------CTTCCCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred --------------------------------------------------CCCCcCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 245667889999999999999999999987
Q ss_pred h
Q 037504 263 I 263 (396)
Q Consensus 263 ~ 263 (396)
+
T Consensus 155 ~ 155 (156)
T 1bd8_A 155 H 155 (156)
T ss_dssp T
T ss_pred h
Confidence 4
No 70
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.6e-30 Score=210.41 Aligned_cols=87 Identities=25% Similarity=0.284 Sum_probs=44.3
Q ss_pred chHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHH
Q 037504 59 DTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGA 138 (396)
Q Consensus 59 ~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A 138 (396)
.||||.|+..|+.+++++|++.| .++ + .|..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|
T Consensus 3 ~~~L~~A~~~g~~~~v~~Ll~~g--~~~--~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A 74 (153)
T 1awc_B 3 GKKLLEAARAGQDDEVRILMANG--APF--T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVS---RDARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHT--CCC--C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCC---TTCCCTTCCCHHHHH
T ss_pred cHHHHHHHHcCCHHHHHHHHHcC--CCC--C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHH
Confidence 34555555555555555555554 332 2 344555555555555555555555555555 333344455555555
Q ss_pred HhcCCHHHHHHHHhh
Q 037504 139 ASLGHTEVVEFLYRE 153 (396)
Q Consensus 139 ~~~~~~~~v~~Ll~~ 153 (396)
+..|+.+++++|++.
T Consensus 75 ~~~~~~~~v~~Ll~~ 89 (153)
T 1awc_B 75 ASEGHANIVEVLLKH 89 (153)
T ss_dssp HHHTCHHHHHHHHTT
T ss_pred HHcChHHHHHHHHHc
Confidence 555555555555543
No 71
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.97 E-value=2.8e-30 Score=213.85 Aligned_cols=155 Identities=26% Similarity=0.295 Sum_probs=140.9
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
...+.||||.|+..|+.++|++|++.| .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~ 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANG--ADV--NAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD---VNAVDHAGMTP 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCC--CCC--CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCH
Confidence 567899999999999999999999998 776 89999999999999999999999999999998 55667789999
Q ss_pred HHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHH
Q 037504 135 IVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENER 214 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (396)
||+|+..|+.+++++|++.++
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~----------------------------------------------------------- 104 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGA----------------------------------------------------------- 104 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCC-----------------------------------------------------------
Confidence 999999999999999997664
Q ss_pred HHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcc
Q 037504 215 ALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRL 294 (396)
Q Consensus 215 ~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~ 294 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++
T Consensus 105 ------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~----~~~~~~~g~t~l~~A~~~~~~~~~ 162 (169)
T 2y1l_E 105 ------------------DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGAD----VNAQDKFGKTAFDISIDNGNEDLA 162 (169)
T ss_dssp ------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred ------------------CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CCCcCCCCCCHHHHHHHhCCHHHH
Confidence 3456678899999999999999999999999999 889999999999999999998888
Q ss_pred ccc
Q 037504 295 NIV 297 (396)
Q Consensus 295 ~~l 297 (396)
++|
T Consensus 163 ~~L 165 (169)
T 2y1l_E 163 EIL 165 (169)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 72
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=1.1e-30 Score=214.66 Aligned_cols=154 Identities=18% Similarity=0.224 Sum_probs=138.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHH
Q 037504 56 RLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPI 135 (396)
Q Consensus 56 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpL 135 (396)
....||||.|+..|+.+++++|++.+ .++ +.+|..|+||||+|+. |+.+++++|+++|++ ++.+|..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~--~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---~~~~~~~g~t~L 74 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNN--VNV--NAQNGFGRTALQVMKL-GNPEIARRLLLRGAN---PDLKDRTGFAVI 74 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSC--CCT--TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC---TTCCCTTSCCHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCC--CCc--cccCccCccHHHHHHc-CcHHHHHHHHHcCCC---CCCCCCCCCCHH
Confidence 45789999999999999999999987 666 8999999999999999 999999999999998 556677999999
Q ss_pred HHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504 136 VGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERA 215 (396)
Q Consensus 136 h~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
|+|+..|+.+++++|++.++
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~------------------------------------------------------------ 94 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQA------------------------------------------------------------ 94 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTC------------------------------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCC------------------------------------------------------------
Confidence 99999999999999997654
Q ss_pred HHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccc
Q 037504 216 LELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLN 295 (396)
Q Consensus 216 ~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~ 295 (396)
+++.+|..|+||||+|++.|+.+++++|+++|++. ++.+|..|+||||+|+..|+.++++
T Consensus 95 -----------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~~~g~t~l~~A~~~~~~~~~~ 154 (162)
T 1ihb_A 95 -----------------DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN---VGHRNHKGDTACDLARLYGRNEVVS 154 (162)
T ss_dssp -----------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCC---TTCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred -----------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCC---CCCcCCCCCcHHHHHHHcCCHHHHH
Confidence 35567888999999999999999999999999983 5889999999999999999998888
Q ss_pred cc
Q 037504 296 IV 297 (396)
Q Consensus 296 ~l 297 (396)
+|
T Consensus 155 ~L 156 (162)
T 1ihb_A 155 LM 156 (162)
T ss_dssp HH
T ss_pred HH
Confidence 77
No 73
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.97 E-value=5.5e-31 Score=235.74 Aligned_cols=183 Identities=16% Similarity=0.115 Sum_probs=156.3
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc--cCCCCcchhHHHHHHhh
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK--NSLKDDDCIELLVKLIE 172 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~--~~~~~~~g~~~l~~~~~ 172 (396)
+++++|.|+..|+.+.++.+++.+.+.. ++.+|..|+||||+|+..|+.+++++|++.++ .+..+..|
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~~~~~~-~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g--------- 145 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSARLLDYV-VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAG--------- 145 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHHHHHHH-HTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCCTTS---------
T ss_pred hccCCCHHHHHHHHHHHHHHHHHHHhhc-CcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCCCCC---------
Confidence 4688999999999999999998876532 56678899999999999999999999999997 44566666
Q ss_pred ccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcC
Q 037504 173 TDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNR 252 (396)
Q Consensus 173 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 252 (396)
.||||+|+..... .....++++.+++. +...+..|..|+||||+|+..|
T Consensus 146 ----~tpL~~a~~~~~~----------------------~~~~~~~v~~Ll~~-----g~~~~~~~~~g~tpLh~A~~~g 194 (276)
T 4hbd_A 146 ----YSPIMLTALATLK----------------------TQDDIETVLQLFRL-----GNINAKASQAGQTALMLAVSHG 194 (276)
T ss_dssp ----CCHHHHGGGCCCC----------------------SHHHHHHHHHHHHH-----SCTTCCCTTTCCCHHHHHHHTT
T ss_pred ----CCHHHHHHHHHhh----------------------hhhhHHHHHHHHHc-----CCCccccCCCCCCHHHHHHHcC
Confidence 8999999854311 22356777766653 5677788899999999999999
Q ss_pred cHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccccchhHhHHHHHHHHHHHhhhc-chhhhhhhcCCCC
Q 037504 253 MREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQLQRELLWFQEVKKVV-PRKFAEEKNNDGL 331 (396)
Q Consensus 253 ~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~~~~l~~~~~v~~l~-~~~~~~~~~~~g~ 331 (396)
+.+++++|+++|++ +|.+|..|+||||+|+..|+.+++++| +. .|++++.+|..|+
T Consensus 195 ~~~~v~~Ll~~gad----~n~~d~~G~TpLh~A~~~g~~~iv~~L-------------------l~~~gad~~~~d~~g~ 251 (276)
T 4hbd_A 195 RVDVVKALLACEAD----VNVQDDDGSTALMCACEHGHKEIAGLL-------------------LAVPSCDISLTDRDGS 251 (276)
T ss_dssp CHHHHHHHHHTTCC----TTCCCTTSCCHHHHHHHHTCHHHHHHH-------------------HTSTTCCTTCCCTTSC
T ss_pred CHHHHHHHHhCCCC----CCCCCCCCCCHHHHHHHCCCHHHHHHH-------------------HhcCCCCCcCcCCCCC
Confidence 99999999999999 899999999999999999999888887 66 7999999999999
Q ss_pred CchhhHHHHh
Q 037504 332 TPGDLFIKEH 341 (396)
Q Consensus 332 tpl~~a~~~~ 341 (396)
|||++|.+..
T Consensus 252 TpL~~A~~~g 261 (276)
T 4hbd_A 252 TALMVALDAG 261 (276)
T ss_dssp CHHHHHHHHT
T ss_pred CHHHHHHHcC
Confidence 9999998754
No 74
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=2.1e-29 Score=204.95 Aligned_cols=123 Identities=24% Similarity=0.301 Sum_probs=112.9
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA 102 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A 102 (396)
..++||.|+..|+.+++++|++. +.+++ . +..|.||||+|+..|+.+++++|++.| .++ +.+|..|.||||+|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~-~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A 74 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFT-T-DWLGTSPLHLAAQYGHFSTTEVLLRAG--VSR--DARTKVDRTPLHMA 74 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCC-C-CTTCCCHHHHHHHHTCHHHHHHHHTTT--CCT--TCCCTTCCCHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCC-c-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CCCCCCCCCHHHHH
Confidence 46899999999999999999987 66665 3 889999999999999999999999988 666 99999999999999
Q ss_pred HHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 103 AASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 75 ~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga 124 (153)
T 1awc_B 75 ASEGHANIVEVLLKHGAD---VNAKDMLKMTALHWATEHNHQEVVELLIKYGA 124 (153)
T ss_dssp HHHTCHHHHHHHHTTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHcChHHHHHHHHHcCCC---CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999 55667799999999999999999999998765
No 75
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.96 E-value=3.4e-30 Score=215.38 Aligned_cols=169 Identities=14% Similarity=0.081 Sum_probs=146.1
Q ss_pred CCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHH
Q 037504 56 RLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPI 135 (396)
Q Consensus 56 ~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpL 135 (396)
..+.++||.|+..|+.+++++|++.+ +.+ ++.+|..|.||||+|+..|+.+++++|+++|++ ++..|..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~-~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNT-END--LNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR---INVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCT-TSC--TTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcC-ccc--ccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC---CCCcCCCCCCHH
Confidence 56889999999999999999999984 133 489999999999999999999999999999999 556677999999
Q ss_pred HHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHH
Q 037504 136 VGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERA 215 (396)
Q Consensus 136 h~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (396)
|+|+..|+.+++++|++.++
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~------------------------------------------------------------ 96 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKA------------------------------------------------------------ 96 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTC------------------------------------------------------------
T ss_pred HHHHHcCCHHHHHHHHHcCC------------------------------------------------------------
Confidence 99999999999999997664
Q ss_pred HHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccc
Q 037504 216 LELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLN 295 (396)
Q Consensus 216 ~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~ 295 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.++++
T Consensus 97 -----------------~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~~~ 155 (179)
T 3f6q_A 97 -----------------DINAVNEHGNVPLHYACFWGQDQVAEDLVANGAL----VSICNKYGEMPVDKAKAPLRELLRE 155 (179)
T ss_dssp -----------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----SSBCCTTSCCGGGGSCHHHHHHHHH
T ss_pred -----------------CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC----cchhccCCCCcHHHHHHHHHHHHHH
Confidence 3556788899999999999999999999999999 8899999999999999988877776
Q ss_pred cccchhHhHHHHHHHHHHHhhhcchhhhhhhcCCC
Q 037504 296 IVSVAALQLQRELLWFQEVKKVVPRKFAEEKNNDG 330 (396)
Q Consensus 296 ~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~~~~g 330 (396)
+| +..|++++..+.++
T Consensus 156 ~L-------------------~~~g~~~~~~~~~~ 171 (179)
T 3f6q_A 156 RA-------------------EKMGQNLNRIPYKD 171 (179)
T ss_dssp HH-------------------HHTTCCCSCBCCCC
T ss_pred HH-------------------HHhhcCcccCCccc
Confidence 66 55778887766554
No 76
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.96 E-value=5.7e-30 Score=211.03 Aligned_cols=155 Identities=26% Similarity=0.322 Sum_probs=137.0
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+..|.||||.|+..|+.+++++|++.+ ..+++..+..|.||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~---~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~ 78 (165)
T 3twr_A 5 NSEADRQLLEAAKAGDVETVKKLCTVQ---SVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD---VHAKDKGGLVP 78 (165)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHCCTT---TTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred cchhhHHHHHHHHhCCHHHHHHHHHcC---CCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC---CCccCCCCCCH
Confidence 677999999999999999999999864 233478888999999999999999999999999999 56667799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHH
Q 037504 135 IVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENER 214 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (396)
||+|+..|+.+++++|++.++
T Consensus 79 L~~A~~~~~~~~v~~Ll~~g~----------------------------------------------------------- 99 (165)
T 3twr_A 79 LHNACSYGHYEVAELLVKHGA----------------------------------------------------------- 99 (165)
T ss_dssp HHHHHHTTCHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred HHHHHHcCcHHHHHHHHhCCC-----------------------------------------------------------
Confidence 999999999999999997664
Q ss_pred HHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcc
Q 037504 215 ALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRL 294 (396)
Q Consensus 215 ~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~ 294 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||||+|+. ++.+++
T Consensus 100 ------------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~l~~a~~-~~~~i~ 156 (165)
T 3twr_A 100 ------------------VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD----PTKKNRDGNTPLDLVKD-GDTDIQ 156 (165)
T ss_dssp ------------------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCTTSCCTGGGSCT-TCHHHH
T ss_pred ------------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCChhHhHhc-CChHHH
Confidence 3556778899999999999999999999999999 88999999999999877 777777
Q ss_pred ccc
Q 037504 295 NIV 297 (396)
Q Consensus 295 ~~l 297 (396)
++|
T Consensus 157 ~~L 159 (165)
T 3twr_A 157 DLL 159 (165)
T ss_dssp HHH
T ss_pred HHH
Confidence 776
No 77
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.96 E-value=1.3e-31 Score=248.59 Aligned_cols=238 Identities=13% Similarity=0.081 Sum_probs=159.0
Q ss_pred ccccchHHHHHHHcCCHHHHHHHHHhCcccc---ccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcc---cchhcccC
Q 037504 20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEI---GDVITRLGDTALHVAAAANRIDFVKKLVKKMKAEN---LDLAKRNR 93 (396)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~---~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~---~d~~~~d~ 93 (396)
+.++.||||+|++.|+.++|++|++. +... +.. +..|.||||+|+..|+.++|++|++.| ++ .+++.++
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~-~~~~~tpL~~Aa~~G~~eiv~~Ll~~g--ad~~~~~i~~~~- 163 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVI-QAENYQAFRLAAENGHLHVLNRLCELA--PTEIMAMIQAEN- 163 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC---CHHHHHHHHHHHHTTCHHHHHHHHHSC--TTTHHHHHSHHH-
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHh-ccCCCCHHHHHHHcCCHHHHHHHHhCC--CCccccccCCCC-
Confidence 44567999999999999999999976 5411 122 556899999999999999999999998 54 2223333
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHH-hcCCHHHHHHHHhhcccCCCCcchhHHHHHHhh
Q 037504 94 IGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAA-SLGHTEVVEFLYRETKNSLKDDDCIELLVKLIE 172 (396)
Q Consensus 94 ~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~-~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~ 172 (396)
.||||+|+..|+.++|++|+++|++++. ...|..|.||||+|+ ..|+.+++++|++.++ .|
T Consensus 164 --~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~-~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga------~~--------- 225 (376)
T 2aja_A 164 --YHAFRLAAENGHLHVLNRLCELAPTEAT-AMIQAENYYAFRWAAVGRGHHNVINFLLDCPV------ML--------- 225 (376)
T ss_dssp --HHHHHHHHHTTCHHHHHHHHHSCGGGHH-HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH------HH---------
T ss_pred --CCHHHHHHHCCCHHHHHHHHHcCCccch-hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC------cc---------
Confidence 8999999999999999999999998432 014557999999999 9999999999998664 13
Q ss_pred ccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcC
Q 037504 173 TDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNR 252 (396)
Q Consensus 173 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~ 252 (396)
.||||+|+..|+ .++++++++.. ..++..+ +++++|+..|
T Consensus 226 ----~taL~~Aa~~g~---------------------------~evv~lL~~~g-----a~~~~~~----~~l~~A~~~g 265 (376)
T 2aja_A 226 ----AYAEIHEFEYGE---------------------------KYVNPFIARHV-----NRLKEMH----DAFKLSNPDG 265 (376)
T ss_dssp ----HHHHHCTTTTTT---------------------------TTHHHHHHHHH-----HHHHHHH----TTTTTTSSSS
T ss_pred ----chHHHHHHHCCC---------------------------HHHHHHHHhcC-----ccccccc----HHHHHHHHCC
Confidence 899999999983 34555555432 2222211 1222333222
Q ss_pred ---------------------------cHHHHHHHHhhccccccc-cccccCCCCchhhhhhcCCCCCccccccchhHhH
Q 037504 253 ---------------------------MREIFKFIFEISSVADLL-FDSKDKDGNNILHLAGKLPPLNRLNIVSVAALQL 304 (396)
Q Consensus 253 ---------------------------~~~~v~~Ll~~g~~~~~~-~n~~d~~g~TpLh~A~~~~~~~~~~~l~~~~~~~ 304 (396)
..+.+++|++.+...... .......++||||+|+..|+.+++++|
T Consensus 266 ~~~vv~~~~~~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lL------- 338 (376)
T 2aja_A 266 VFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALL------- 338 (376)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHH-------
T ss_pred ChhhhcHHhhhhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHH-------
Confidence 244556666543211100 112334678999999999999999887
Q ss_pred HHHHHHHHHHhhhcchhhhhhhcCCCCCchhhHHHHhH
Q 037504 305 QRELLWFQEVKKVVPRKFAEEKNNDGLTPGDLFIKEHE 342 (396)
Q Consensus 305 ~~~l~~~~~v~~l~~~~~~~~~~~~g~tpl~~a~~~~~ 342 (396)
+.. ...++..|+||+++|...+.
T Consensus 339 ------------l~~---~~v~~~~~~~~~~~~~~~~~ 361 (376)
T 2aja_A 339 ------------LSI---PSVLALTKANNYYINETGGR 361 (376)
T ss_dssp ------------TTS---HHHHHSCC------------
T ss_pred ------------HcC---hHHHHHHHHhcccccccccc
Confidence 433 37788999999999886544
No 78
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=8.7e-30 Score=223.12 Aligned_cols=177 Identities=16% Similarity=0.127 Sum_probs=124.3
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+..|.||||.|+..|+.++++.|+++| .++ +. +..|.||||+|+..|+.+++++|++.|++ ++.+|..|.||
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g--~~~--~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~---~~~~d~~g~t~ 73 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAHG--MRV--KF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD---PSLPNDEGITA 73 (239)
T ss_dssp ----------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSS---CCCCCTTSCCH
T ss_pred CccccccCchhhhhhhHHHHHHHhccC--CCc--cc-CchhhHHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCH
Confidence 456999999999999999999999998 666 43 36789999999999999999999999998 56667799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHH
Q 037504 135 IVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENER 214 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (396)
||+|+..|+.+++++|+++++
T Consensus 74 L~~A~~~g~~~~v~~Ll~~ga----------------------------------------------------------- 94 (239)
T 1ycs_B 74 LHNAVCAGHTEIVKFLVQFGV----------------------------------------------------------- 94 (239)
T ss_dssp HHHHHHHTCHHHHHHHHHHTC-----------------------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCC-----------------------------------------------------------
Confidence 999999999999999997664
Q ss_pred HHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCC-chhhhh--hcCCCC
Q 037504 215 ALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGN-NILHLA--GKLPPL 291 (396)
Q Consensus 215 ~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~-TpLh~A--~~~~~~ 291 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|. ||||+| +..|+.
T Consensus 95 ------------------~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~~~~t~l~~a~~~~~g~~ 152 (239)
T 1ycs_B 95 ------------------NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAA----VFAMTYSDMQTAADKCEEMEEGYT 152 (239)
T ss_dssp ------------------CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----TTCCCSSSCCCHHHHCCSSSTTCC
T ss_pred ------------------CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----cceecCCCCcchHHHHHHhhhccH
Confidence 3567788999999999999999999999999999 888998777 999999 788999
Q ss_pred CccccccchhHhHHHHHHHHHHHhhhcchhhhhhh---------cCCCCCchhhHHH
Q 037504 292 NRLNIVSVAALQLQRELLWFQEVKKVVPRKFAEEK---------NNDGLTPGDLFIK 339 (396)
Q Consensus 292 ~~~~~l~~~~~~~~~~l~~~~~v~~l~~~~~~~~~---------~~~g~tpl~~a~~ 339 (396)
+++++| +..+++++.. +..|.+|++++.+
T Consensus 153 ~~~~~L-------------------l~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~ 190 (239)
T 1ycs_B 153 QCSQFL-------------------YGVQEKMGIMNKGVIYALWDYEPQNDDELPMK 190 (239)
T ss_dssp CHHHHH-------------------HHHHHHTTTTGGGEEEESSCBCCSSTTBCCBC
T ss_pred HHHHHH-------------------HHhhhcccccccceEEEEeccCCCCCCccccc
Confidence 999887 4456665554 6678888888754
No 79
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=3.4e-29 Score=204.37 Aligned_cols=151 Identities=22% Similarity=0.238 Sum_probs=136.2
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHH
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVG 137 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~ 137 (396)
+.||||.|+..|+.+++++|++.. ..++ +.+|..|.||||+ +..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~-~~~~--~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~---~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHRE-LVHP--DALNRFGKTALQV-MMFGSTAIALELLKQGAS---PNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHTT-CCCT--TCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHhh-CcCc--cccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC---CCCcCCCCCCHHHH
Confidence 579999999999999999999982 2344 9999999999999 999999999999999999 56667799999999
Q ss_pred HHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHH
Q 037504 138 AASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALE 217 (396)
Q Consensus 138 A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (396)
|+..|+.+++++|++.|+
T Consensus 75 A~~~~~~~~v~~Ll~~g~-------------------------------------------------------------- 92 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGA-------------------------------------------------------------- 92 (156)
T ss_dssp HHHTTCHHHHHHHHHTTC--------------------------------------------------------------
T ss_pred HHHcCcHHHHHHHHHcCC--------------------------------------------------------------
Confidence 999999999999997664
Q ss_pred HHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 218 LVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 218 ~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
+++.+|..|+||||+|++.|+.+++++|++. ++ ++.+|..|.||||+|+..|+.+++++|
T Consensus 93 ---------------~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~----~~~~~~~g~t~l~~A~~~~~~~~v~~L 152 (156)
T 1bd8_A 93 ---------------DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SD----LHRRDARGLTPLELALQRGAQDLVDIL 152 (156)
T ss_dssp ---------------CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SC----TTCCCTTSCCHHHHHHHSCCHHHHHHH
T ss_pred ---------------CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cC----CCCcCCCCCCHHHHHHHcCcHHHHHHH
Confidence 3556788899999999999999999999999 77 889999999999999999998888776
No 80
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.95 E-value=1.9e-29 Score=233.97 Aligned_cols=244 Identities=12% Similarity=0.089 Sum_probs=162.5
Q ss_pred CCCCccccccccCCCc----ccccccchHHHHHHHcCCHHHHHHHHHhCcc-----ccccccCCCCchHHHHHHHcCCHH
Q 037504 2 AHSAPLELHVYSNPPV----EEIRTRRLKLYRVALNGDWARAKVIYDEHKD-----EIGDVITRLGDTALHVAAAANRID 72 (396)
Q Consensus 2 ~h~~~~~~~~~~~~~~----~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~-----~~~~~~~~~g~t~Lh~A~~~g~~~ 72 (396)
||.+++++++..+.+. ..+..|.||||+|+..|+.++|++|++. |+ +++.. + .||||+|+..|+.+
T Consensus 103 G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~-~---~TpLh~Aa~~G~~e 177 (376)
T 2aja_A 103 GCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAE-N---YHAFRLAAENGHLH 177 (376)
T ss_dssp CCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHH-H---HHHHHHHHHTTCHH
T ss_pred CCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCC-C---CCHHHHHHHCCCHH
Confidence 6788899998887632 3466789999999999999999999986 64 34333 2 99999999999999
Q ss_pred HHHHHHHHhhhcccchhc--ccCCCCcHHHHHH-HcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHH
Q 037504 73 FVKKLVKKMKAENLDLAK--RNRIGCTALFYAA-ASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEF 149 (396)
Q Consensus 73 ~v~~Ll~~~~~~~~d~~~--~d~~g~tpLh~A~-~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~ 149 (396)
+|++|++.| +++ +. .|..|.||||+|+ ..|+.++|++|++.|+ .|.||||+|+..|+.+++++
T Consensus 178 iv~~Ll~~g--a~~--~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga----------~~~taL~~Aa~~g~~evv~l 243 (376)
T 2aja_A 178 VLNRLCELA--PTE--ATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV----------MLAYAEIHEFEYGEKYVNPF 243 (376)
T ss_dssp HHHHHHHSC--GGG--HHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH----------HHHHHHHCTTTTTTTTHHHH
T ss_pred HHHHHHHcC--Ccc--chhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC----------ccchHHHHHHHCCCHHHHHH
Confidence 999999998 766 55 8889999999999 9999999999999774 38899999999999999999
Q ss_pred HHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCc-----chhhhhhhccchhhhhHHHHHHHHHHHH
Q 037504 150 LYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPR-----GIFQRYFNLGAKAVENERALELVELLWE 224 (396)
Q Consensus 150 Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 224 (396)
|++.++. .. . ..++++.|+..|+........ ...+.+...+.. ...+.++++++
T Consensus 244 L~~~ga~-~~--~-------------~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~~~-----~~~~~~~~Ll~ 302 (376)
T 2aja_A 244 IARHVNR-LK--E-------------MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDE-----VLLDDIRFLLS 302 (376)
T ss_dssp HHHHHHH-HH--H-------------HHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCG-----GGHHHHHHHHT
T ss_pred HHhcCcc-cc--c-------------ccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcchh-----hHHHHHHHHHh
Confidence 9998871 10 0 045777787777554322100 001111111111 12334444332
Q ss_pred H----HHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCcccc
Q 037504 225 N----FLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNI 296 (396)
Q Consensus 225 ~----ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~ 296 (396)
. .+...+ .....+.||||+|++.|+.+++++|++.|. .+|..|+|++.+|-+.|..++.++
T Consensus 303 ~~~vk~l~~~g----~~~n~~~~~L~~A~~~g~~e~v~lLl~~~~-------v~~~~~~~~~~~~~~~~~~~~~~~ 367 (376)
T 2aja_A 303 IPGIKALAPTA----TIPGDANELLRLALRLGNQGACALLLSIPS-------VLALTKANNYYINETGGRLDLRAV 367 (376)
T ss_dssp STTTGGGSSCC----SSTTCCCHHHHHHHHHTCTTHHHHHTTSHH-------HHHSCC------------------
T ss_pred ChhhhhhhccC----CCCCCccHHHHHHHHcCcHHHHHHHHcChH-------HHHHHHHhccccccccccccHHHH
Confidence 1 000112 223457899999999999999999999764 368899999999999999887654
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.95 E-value=1.4e-27 Score=190.18 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=97.8
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCC-CCc
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRI-GCT 97 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~-g~t 97 (396)
.+..|.||||+|+..|+.+++++|++. +.+++.+ |..|+||||+|+. |+.+++++|++.| +++ +.+|.. |.|
T Consensus 8 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g--~~~--~~~~~~~g~t 80 (136)
T 1d9s_A 8 LGGSSDAGLATAAARGQVETVRQLLEA-GADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHG--AEP--NCADPATLTR 80 (136)
T ss_dssp CCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHT--CCS--SCCBTTTTBC
T ss_pred CCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCC--CCC--CCcCCCCCCC
Confidence 566777888888888888888877765 7777776 7778888888888 8888888888777 665 777777 788
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|+++|+
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAGAR---LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTCCC---CCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 88888888888888888888877 44556678888888888888888888877764
No 82
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.95 E-value=4e-28 Score=203.53 Aligned_cols=158 Identities=15% Similarity=0.115 Sum_probs=121.1
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCH----HHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRI----DFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~----~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
+.++|+.|++.|+.+.++.++... ++...+..|+||||+|+..|+. +++++|++.| +++ +.+|..|+||
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~---~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~G--adv--n~~d~~g~Tp 78 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG---YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKG--ADI--KSRTKEGTTL 78 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS---SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTT--CCS--SCCCTTCCCT
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC---cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCC--CCC--CCCCCCCCcH
Confidence 567888888888888888888652 2344236688888888888875 4888888887 766 8888888888
Q ss_pred HHHHHHcCC------HHHHHHHHhcCCCCccccCCCCCCC-cHHHHHHhcCC-----HHHHHHHHhhcccCCCCcchhHH
Q 037504 99 LFYAAASGS------VELVKATMEGNEDITMVPQDDKDRM-LPIVGAASLGH-----TEVVEFLYRETKNSLKDDDCIEL 166 (396)
Q Consensus 99 Lh~A~~~g~------~~~v~~Ll~~g~~~~~~~~~d~~g~-tpLh~A~~~~~-----~~~v~~Ll~~~~~~~~~~~g~~~ 166 (396)
||+|+..|+ .+++++|+++|++ ++.+|..|. ||||+|+..+. .+++++|++
T Consensus 79 Lh~a~~~~~~~~~~~~~iv~~Ll~~Gad---in~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~-------------- 141 (186)
T 3t8k_A 79 FFPLFQGGGNDITGTTELCKIFLEKGAD---ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFS-------------- 141 (186)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHTTCC---SSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHT--------------
T ss_pred HHHHHHcCCcchhhHHHHHHHHHHCCCC---CCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHH--------------
Confidence 888888776 5778888888888 556666788 88888877443 223333332
Q ss_pred HHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHH
Q 037504 167 LVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFH 246 (396)
Q Consensus 167 l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh 246 (396)
..+.+++.+|..|+||||
T Consensus 142 --------------------------------------------------------------~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 142 --------------------------------------------------------------QSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp --------------------------------------------------------------STTCCTTCCCTTSCCHHH
T ss_pred --------------------------------------------------------------hcCCCCcccCCCCCCHHH
Confidence 246678889999999999
Q ss_pred HHHHcCcHHHHHHHHhhccc
Q 037504 247 IAVSNRMREIFKFIFEISSV 266 (396)
Q Consensus 247 ~A~~~~~~~~v~~Ll~~g~~ 266 (396)
+|++.|+.+++++|.+....
T Consensus 160 ~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 160 FVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp HHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHH
Confidence 99999999999999987765
No 83
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.95 E-value=1.1e-27 Score=195.41 Aligned_cols=142 Identities=16% Similarity=0.138 Sum_probs=111.4
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCc-
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRML- 133 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~t- 133 (396)
+..|.||||+|+..|+.++|++|++.| .++ +.+|..|+||||+|+ .|+.+++++|+++|++ ++.+|..|.|
T Consensus 9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~---~~~~d~~g~tt 80 (156)
T 1bi7_B 9 MEPSADWLATAAARGRVEEVRALLEAG--ANP--NAPNSYGRRPIQVMM-MGSARVAELLLLHGAE---PNCADPATLTR 80 (156)
T ss_dssp -CCSTTHHHHHHHHTCHHHHHHHHTTT--CCT--TCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCC---CCCCCTTTCCC
T ss_pred CccchHHHHHHHHcCCHHHHHHHHHcC--CCC--CCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCC---CCCcCCCCCcH
Confidence 678999999999999999999999987 666 889999999999985 8999999999999998 5666778998
Q ss_pred HHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH
Q 037504 134 PIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE 213 (396)
Q Consensus 134 pLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (396)
|||+|+..|+.+++++|+++++
T Consensus 81 pL~~A~~~~~~~~v~~Ll~~ga---------------------------------------------------------- 102 (156)
T 1bi7_B 81 PVHDAAREGFLDTLVVLHRAGA---------------------------------------------------------- 102 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTC----------------------------------------------------------
T ss_pred HHHHHHHCCCHHHHHHHHHcCC----------------------------------------------------------
Confidence 9999999999999999997664
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhh
Q 037504 214 RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLA 285 (396)
Q Consensus 214 ~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A 285 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||.+-+
T Consensus 103 -------------------~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~----~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 103 -------------------RLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGG----TRGSNHARIDAAEGP 151 (156)
T ss_dssp -------------------CSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC---------------------
T ss_pred -------------------CCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCC----CCccCcCcCcccccC
Confidence 3556788899999999999999999999999999 889999999998744
No 84
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=3.3e-27 Score=187.92 Aligned_cols=121 Identities=18% Similarity=0.131 Sum_probs=110.5
Q ss_pred ccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccC
Q 037504 47 KDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQ 126 (396)
Q Consensus 47 ~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~ 126 (396)
+.+++.. +..|.||||+|+..|+.+++++|++.| .++ +.+|..|+||||+|+. |+.+++++|+++|++ ++.
T Consensus 2 ~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~---~~~ 72 (136)
T 1d9s_A 2 SPGIHML-GGSSDAGLATAAARGQVETVRQLLEAG--ADP--NALNRFGRRPIQVMMM-GSAQVAELLLLHGAE---PNC 72 (136)
T ss_dssp CCCCSCC-CCCCSCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCC---SSC
T ss_pred CCCccCC-CCCCccHHHHHHHcCCHHHHHHHHHcC--CCc--CCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCC---CCC
Confidence 4567777 899999999999999999999999998 776 9999999999999999 999999999999999 556
Q ss_pred CCCC-CCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccch
Q 037504 127 DDKD-RMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSY 176 (396)
Q Consensus 127 ~d~~-g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~ 176 (396)
+|.. |.||||+|+..|+.+++++|++.++ .+..+..|.+||+.+...+..
T Consensus 73 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~ 124 (136)
T 1d9s_A 73 ADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHR 124 (136)
T ss_dssp CBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence 6778 9999999999999999999999998 677888999999999887654
No 85
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=6.9e-28 Score=202.07 Aligned_cols=150 Identities=14% Similarity=0.129 Sum_probs=124.4
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc-CCCCcHHHHHHHcCCH----HHHHHHHhcCCCCccccCCCCCCC
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN-RIGCTALFYAAASGSV----ELVKATMEGNEDITMVPQDDKDRM 132 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d-~~g~tpLh~A~~~g~~----~~v~~Ll~~g~~~~~~~~~d~~g~ 132 (396)
+.++|+.|++.|+.+.++.+++.+ + +.++ ..|+||||+|+..|+. +++++|+++|++ ++.+|..|+
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~----~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad---vn~~d~~g~ 76 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG----Y--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD---IKSRTKEGT 76 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS----S--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC---SSCCCTTCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC----c--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC---CCCCCCCCC
Confidence 468899999999999999999865 2 4455 7899999999999975 599999999999 566677999
Q ss_pred cHHHHHHhcCCH------HHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhcc
Q 037504 133 LPIVGAASLGHT------EVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLG 206 (396)
Q Consensus 133 tpLh~A~~~~~~------~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~ 206 (396)
||||+|+..++. +++++|+++
T Consensus 77 TpLh~a~~~~~~~~~~~~~iv~~Ll~~----------------------------------------------------- 103 (186)
T 3t8k_A 77 TLFFPLFQGGGNDITGTTELCKIFLEK----------------------------------------------------- 103 (186)
T ss_dssp CTHHHHHHHCTTCHHHHHHHHHHHHHT-----------------------------------------------------
T ss_pred cHHHHHHHcCCcchhhHHHHHHHHHHC-----------------------------------------------------
Confidence 999999988863 344444443
Q ss_pred chhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCC-cHHHHHHHcC-----cHHHHHHHHh-hccccccccccccCCCC
Q 037504 207 AKAVENERALELVELLWENFLFKYPDLIWKFDENGH-TIFHIAVSNR-----MREIFKFIFE-ISSVADLLFDSKDKDGN 279 (396)
Q Consensus 207 ~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~-t~Lh~A~~~~-----~~~~v~~Ll~-~g~~~~~~~n~~d~~g~ 279 (396)
++++|.+|..|+ ||||+|+..+ ..+++++|++ +|++ ++.+|..|+
T Consensus 104 ------------------------Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad----~~~~d~~G~ 155 (186)
T 3t8k_A 104 ------------------------GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQ----LLIKDKWGL 155 (186)
T ss_dssp ------------------------TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCC----TTCCCTTSC
T ss_pred ------------------------CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCC----CcccCCCCC
Confidence 556777788888 8888888743 4579999999 9999 899999999
Q ss_pred chhhhhhcCCCCCccccc
Q 037504 280 NILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 280 TpLh~A~~~~~~~~~~~l 297 (396)
||||+|++.|+.+++++|
T Consensus 156 TpL~~A~~~~~~~~v~~L 173 (186)
T 3t8k_A 156 TALEFVKRCQKPIALKMM 173 (186)
T ss_dssp CHHHHHHTTTCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHH
Confidence 999999999998888776
No 86
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.94 E-value=1.7e-26 Score=183.86 Aligned_cols=128 Identities=21% Similarity=0.262 Sum_probs=117.1
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
.....+.||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.|
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~d~~g~t 82 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMAN-GADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNG--ADV--NAVDAIGFT 82 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTCCC
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CcCCCCCCC
Confidence 4566789999999999999999999986 8999988 999999999999999999999999998 776 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhc
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRET 154 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~ 154 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.|
T Consensus 83 ~L~~A~~~~~~~~v~~Ll~~g~~---~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 83 PLHLAAFIGHLEIAEVLLKHGAD---VNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 99999999999999999999999 5566779999999999999999999999865
No 87
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.93 E-value=7.9e-27 Score=190.35 Aligned_cols=137 Identities=15% Similarity=0.140 Sum_probs=117.0
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
..+..|.||||+|+..|+.++|++|++. +.+++.. +..|+||||+|+ .|+.+++++|++.| +++ +.+|..|.|
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g--~~~--~~~d~~g~t 79 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHG--AEP--NCADPATLT 79 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTT--CCC--CCCCTTTCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcC--CCC--CCcCCCCCc
Confidence 3567789999999999999999999976 8999988 899999999985 99999999999998 776 999999999
Q ss_pred -HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc-cCCCCcchh
Q 037504 98 -ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK-NSLKDDDCI 164 (396)
Q Consensus 98 -pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~ 164 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+ .+..+..|.
T Consensus 80 tpL~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~ 145 (156)
T 1bi7_B 80 RPVHDAAREGFLDTLVVLHRAGAR---LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARI 145 (156)
T ss_dssp CHHHHHHHHTCHHHHHHHHHHTCC---SSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----------
T ss_pred HHHHHHHHCCCHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcC
Confidence 99999999999999999999999 56667799999999999999999999999998 566666773
No 88
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=1.4e-25 Score=175.73 Aligned_cols=125 Identities=30% Similarity=0.424 Sum_probs=117.4
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY 101 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~ 101 (396)
+|.||||+|+..|+.+++++|++. +.+++.. +..|.||||+|+..|+.+++++|++.| .++ +.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~--~~~~~~g~t~l~~ 74 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAG--ADV--NAKDKNGRTPLHL 74 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcC--CCC--cccCCCCCcHHHH
Confidence 489999999999999999999986 8888888 899999999999999999999999998 776 8999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 102 AAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 75 A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 75 AARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHcChHHHHHHHHHcCCC---CcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 9999999999999999999 55667799999999999999999999999886
No 89
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.93 E-value=4.4e-25 Score=172.80 Aligned_cols=126 Identities=33% Similarity=0.459 Sum_probs=114.4
Q ss_pred CCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHH
Q 037504 57 LGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIV 136 (396)
Q Consensus 57 ~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh 136 (396)
+|+||||+|+..|+.+++++|++.+ .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~--~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAG--ADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHT--CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcC--CCC--CCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCC---CcccCCCCCcHHH
Confidence 5899999999999999999999998 666 88999999999999999999999999999998 5566778999999
Q ss_pred HHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHH
Q 037504 137 GAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERAL 216 (396)
Q Consensus 137 ~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (396)
+|+..|+.+++++|++.++
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~------------------------------------------------------------- 92 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGA------------------------------------------------------------- 92 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTC-------------------------------------------------------------
T ss_pred HHHHcChHHHHHHHHHcCC-------------------------------------------------------------
Confidence 9999999999999997654
Q ss_pred HHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccc
Q 037504 217 ELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSV 266 (396)
Q Consensus 217 ~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 266 (396)
+++.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 93 ----------------~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 93 ----------------DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp ----------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred ----------------CCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 2456678899999999999999999999999985
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.5e-25 Score=176.99 Aligned_cols=126 Identities=25% Similarity=0.337 Sum_probs=112.1
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
...+.||||+|+..|+.+++++|++.| .++ +.+|..|.||||+|+..|+.+++++|+++|++ ++.+|..|.||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~t~ 83 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANG--ADV--NAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD---VNAVDAIGFTP 83 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTCCCH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcC--CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCH
Confidence 567899999999999999999999998 776 89999999999999999999999999999999 55667799999
Q ss_pred HHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHH
Q 037504 135 IVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENER 214 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (396)
||+|+..|+.+++++|++.++
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~----------------------------------------------------------- 104 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGA----------------------------------------------------------- 104 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred HHHHHHcCCHHHHHHHHHcCC-----------------------------------------------------------
Confidence 999999999999999997654
Q ss_pred HHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhc
Q 037504 215 ALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEIS 264 (396)
Q Consensus 215 ~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g 264 (396)
+++.+|.+|+||||+|+..|+.+++++|+++|
T Consensus 105 ------------------~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 105 ------------------DVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp ------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred ------------------CCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 34566788999999999999999999999876
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.93 E-value=1.8e-25 Score=196.09 Aligned_cols=28 Identities=0% Similarity=-0.085 Sum_probs=24.6
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHhhccc
Q 037504 239 ENGHTIFHIAVSNRMREIFKFIFEISSV 266 (396)
Q Consensus 239 ~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~ 266 (396)
..+.||||+|+..|+.+++++|++++.+
T Consensus 158 ~~~~~~l~~a~~~g~~~iv~~L~~~~~~ 185 (244)
T 3ui2_A 158 TPKGNPMQFGRRIGLEKVINVLEGQVFE 185 (244)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHEE
T ss_pred cCCCCHHHHHHHcChHHHHHHHHHhccc
Confidence 3478999999999999999999998665
No 92
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.92 E-value=9.4e-26 Score=179.72 Aligned_cols=129 Identities=14% Similarity=0.111 Sum_probs=115.7
Q ss_pred ccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 18 EEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 18 ~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
.++..|.||||+|+..|+.+++++|++. +.+++.+ |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.|
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~--~~~~~~g~t 78 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQHK--ALV--NTTGYQNDS 78 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCGGGCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcC--Ccc--cCcCCCCCC
Confidence 5688899999999999999999999985 8999988 999999999999999999999999998 776 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..+..+++++|.+...
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~ 133 (137)
T 3c5r_A 79 PLHDAAKNGHVDIVKLLLSYGAS---RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES 133 (137)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence 99999999999999999999999 56667899999999999999888888776543
No 93
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.91 E-value=6.4e-25 Score=174.86 Aligned_cols=124 Identities=20% Similarity=0.220 Sum_probs=100.9
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHH
Q 037504 90 KRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVK 169 (396)
Q Consensus 90 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~ 169 (396)
.+|..|+||||+|+..|+.+++++|++.|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------------- 67 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD---PNVKDHAGWTPLHEACNHGHLKVVELLLQHKA-------------- 67 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC---SCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC--------------
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCC--------------
Confidence 5677888888888888888888888888887 45566688888888888888888888886554
Q ss_pred HhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHH
Q 037504 170 LIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAV 249 (396)
Q Consensus 170 ~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~ 249 (396)
+++.+|..|+||||+|+
T Consensus 68 ---------------------------------------------------------------~~~~~~~~g~t~L~~A~ 84 (137)
T 3c5r_A 68 ---------------------------------------------------------------LVNTTGYQNDSPLHDAA 84 (137)
T ss_dssp ---------------------------------------------------------------CTTCCCGGGCCHHHHHH
T ss_pred ---------------------------------------------------------------cccCcCCCCCCHHHHHH
Confidence 24456777889999999
Q ss_pred HcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCCCCccccc
Q 037504 250 SNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPPLNRLNIV 297 (396)
Q Consensus 250 ~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~~~~~~~l 297 (396)
..|+.+++++|+++|++ ++.+|..|+||||+|+..+..+++.++
T Consensus 85 ~~~~~~~v~~Ll~~ga~----~~~~~~~g~tpl~~A~~~~~~~~l~~l 128 (137)
T 3c5r_A 85 KNGHVDIVKLLLSYGAS----RNAVNIFGLRPVDYTDDESMKSLLLLP 128 (137)
T ss_dssp HTTCHHHHHHHHHTTCC----TTCCCTTSCCGGGGCCCHHHHHHHSCC
T ss_pred HcCCHHHHHHHHHcCCC----CCCCCCCCCCHHHHHhhccHHHHHhhc
Confidence 99999999999998888 788889999999999888777766665
No 94
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.91 E-value=1e-24 Score=170.27 Aligned_cols=117 Identities=17% Similarity=0.193 Sum_probs=103.7
Q ss_pred ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHH
Q 037504 20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTAL 99 (396)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpL 99 (396)
+..|.||||+|+..|+.++++.|++. +.+++.. |..|+||||+|+..|+.+++++|++.| +++ +.+|..|+|||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--~~~d~~g~tpL 77 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKG--ADI--NAPDKHHITPL 77 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTT--CCT--TCCCTTSCCHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc-CCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcC--CCC--CcCCCCCCCHH
Confidence 45678999999999999999999985 8899888 999999999999999999999999988 776 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHH
Q 037504 100 FYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTE 145 (396)
Q Consensus 100 h~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~ 145 (396)
|+|+..|+.+++++|+++|++ ++.+|..|.||||+|...+..+
T Consensus 78 ~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~ 120 (123)
T 3aaa_C 78 LSAVYEGHVSCVKLLLSKGAD---KTVKGPDGLTAFEATDNQAIKA 120 (123)
T ss_dssp HHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHCCCHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHhCCHHHHH
Confidence 999999999999999999999 5566779999999995444433
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.3e-24 Score=182.11 Aligned_cols=111 Identities=23% Similarity=0.246 Sum_probs=77.7
Q ss_pred ccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhccc-CCCCcH
Q 037504 20 IRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRN-RIGCTA 98 (396)
Q Consensus 20 ~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d-~~g~tp 98 (396)
+..|.||||+|+..|+.++++.|++ +.+++.+ |..|+||||+|+..|+.+++++|++.| +++ +.+| ..|+||
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~--~~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~~--~~~~~~~g~tp 113 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE--DRDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAG--ADL--DHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT--TSCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCSSSSCCH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh--cCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CcCCCCCCCCH
Confidence 4566777777777777777777775 5666666 677777777777777777777777766 555 6666 667777
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHh
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAAS 140 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~ 140 (396)
||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+.
T Consensus 114 L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELGAD---IEVEDERGLTALELARE 152 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCC---TTCCCTTSCCHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcCCC---CcCCCCCCCCHHHHHHH
Confidence 7777777777777777777776 44455567777777764
No 96
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=4e-24 Score=193.13 Aligned_cols=141 Identities=20% Similarity=0.176 Sum_probs=85.0
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccc---cCCCCCCCcHHHHHHhc---CCHHHHHHHHhhcc-cCCCCcchhHHH
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDITMV---PQDDKDRMLPIVGAASL---GHTEVVEFLYRETK-NSLKDDDCIELL 167 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~---~~~d~~g~tpLh~A~~~---~~~~~v~~Ll~~~~-~~~~~~~g~~~l 167 (396)
+.++||.|+..|+.+.++.|++.|++++.. ...|..|.||||+|+.. ++.+++++|++.++ .+..+.+|
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G---- 226 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADG---- 226 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTC----
T ss_pred hHHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCC----
Confidence 345555555555555555555555553211 00244555566655554 55555555555555 33344444
Q ss_pred HHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHH
Q 037504 168 VKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHI 247 (396)
Q Consensus 168 ~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~ 247 (396)
.||||+|+..| ..++++.|++ .+++++.+|.+|.||||+
T Consensus 227 ---------~TpLh~A~~~g---------------------------~~~~v~~Ll~-----~gad~~~~d~~G~TpL~~ 265 (301)
T 2b0o_E 227 ---------NTALHYAALYN---------------------------QPDCLKLLLK-----GRALVGTVNEAGETALDI 265 (301)
T ss_dssp ---------CCHHHHHHHTT---------------------------CHHHHHHHHH-----TTCCCSCCCTTSCCHHHH
T ss_pred ---------CCHHHHHHHcC---------------------------CHHHHHHHHH-----cCCCCCCcCCCCCCHHHH
Confidence 55555555555 2344443332 456688889999999999
Q ss_pred HHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCCC
Q 037504 248 AVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLPP 290 (396)
Q Consensus 248 A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~~ 290 (396)
|+..|+.+++++|+++|++ .|.||||+|+..|+
T Consensus 266 A~~~~~~~iv~~Ll~~ga~----------~g~tpLh~A~~~g~ 298 (301)
T 2b0o_E 266 ARKKHHKECEELLEQAQAG----------TFAFPLHVDYSWVI 298 (301)
T ss_dssp HHHHTCHHHHHHHHHHHHH----------TTSSCCC-------
T ss_pred HHHcCCHHHHHHHHHhcCC----------CCCChhHHHHhcCC
Confidence 9999999999999999876 48999999999886
No 97
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=1.9e-24 Score=181.11 Aligned_cols=125 Identities=21% Similarity=0.196 Sum_probs=108.8
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCC-CCCCc
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDD-KDRML 133 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~t 133 (396)
+..|.||||+|+..|+.+++++|++ + .++ +.+|..|+||||+|+..|+.+++++|+++|+++ +.+| ..|+|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~--~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~---~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-D--RDV--DAVDENGRTALLFVAGLGSDKCVRLLAEAGADL---DHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-T--SCT--TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCT---TCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-c--CCC--CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC---CcCCCCCCCC
Confidence 5678999999999999999999999 6 666 999999999999999999999999999999994 4445 68999
Q ss_pred HHHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhc---cchhhHHHHHHhcC
Q 037504 134 PIVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIET---DSYETALHVLARKN 187 (396)
Q Consensus 134 pLh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~---~~~~t~L~~a~~~~ 187 (396)
|||+|+..|+.+++++|+++++ .+..+.+|.++++.+... ....++|++|++.|
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~ 170 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG 170 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccCcccccHHHHHHHcC
Confidence 9999999999999999999998 677888997777777653 33467777777666
No 98
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.91 E-value=4.2e-24 Score=193.01 Aligned_cols=140 Identities=19% Similarity=0.205 Sum_probs=120.7
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccc-----cCCCCchHHHHHHHc---CCHHHHHHHHHHhhhcccchhcccCC
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDV-----ITRLGDTALHVAAAA---NRIDFVKKLVKKMKAENLDLAKRNRI 94 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~d~~~~d~~ 94 (396)
+.++|+.|+..|+.+.++.|++. +.+++.. .+..|.||||+|+.. |+.+++++|++.| +++ +.+|..
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~g--adv--n~~d~~ 225 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHL--DAKAAD 225 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHS--SCT--TCCCTT
T ss_pred hHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcC--CCC--CCCCCC
Confidence 45789999999999999999965 8888772 388999999999997 8999999999998 777 999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhcc
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETD 174 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~ 174 (396)
|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++. .|
T Consensus 226 G~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-----~g----------- 286 (301)
T 2b0o_E 226 GNTALHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQAG-----TF----------- 286 (301)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCC---CSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-----TT-----------
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-----CC-----------
Confidence 99999999999999999999999999 566778999999999999999999999998872 22
Q ss_pred chhhHHHHHHhcCC
Q 037504 175 SYETALHVLARKNL 188 (396)
Q Consensus 175 ~~~t~L~~a~~~~~ 188 (396)
.||||+|+++|+
T Consensus 287 --~tpLh~A~~~g~ 298 (301)
T 2b0o_E 287 --AFPLHVDYSWVI 298 (301)
T ss_dssp --SSCCC-------
T ss_pred --CChhHHHHhcCC
Confidence 899999999883
No 99
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=1.4e-24 Score=187.62 Aligned_cols=128 Identities=19% Similarity=0.214 Sum_probs=112.9
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH-hhhcccchhcccCCCCc
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK-MKAENLDLAKRNRIGCT 97 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-~~~~~~d~~~~d~~g~t 97 (396)
.+..|.||||+|+..|+.++++.|++. +.+++.+ |..|+||||+|+..|+.++|++|++. | .++ +.+|..|.|
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g--~~~--~~~d~~g~t 142 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPN--IEL--NQQNKLGDT 142 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTT--CCC--CCCCTTSCC
T ss_pred cccccccccccccccCcHHHHHHHHhC-CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCC--CCc--cccCCCCCC
Confidence 456789999999999999999999985 8999988 99999999999999999999999998 6 666 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.++++.|++.++
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~---~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGAR---TDLRNIEKKLAFDMATNAACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCC---SCCCCTTSCCHHHHCCSHHHHHHHC-------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCC---CccccCCCCCHHHHhcchhHHHHHHHHhccch
Confidence 99999999999999999999999 55667799999999999999999999999988
No 100
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.90 E-value=3.3e-24 Score=185.40 Aligned_cols=129 Identities=19% Similarity=0.238 Sum_probs=103.5
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCccccCCCCCCCc
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEG-NEDITMVPQDDKDRML 133 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~d~~g~t 133 (396)
+..|.||||+|+..|+.+++++|++.| .++ +.+|..|+||||+|+..|+.+++++|++. |++ ++.+|..|.|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~---~~~~d~~g~t 142 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNR--VGV--NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIE---LNQQNKLGDT 142 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCC---CCCCCTTSCC
T ss_pred ccccccccccccccCcHHHHHHHHhCC--CCc--cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCC---ccccCCCCCC
Confidence 567889999999999999999999987 666 88899999999999999999999999998 888 5566778999
Q ss_pred HHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhH
Q 037504 134 PIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENE 213 (396)
Q Consensus 134 pLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (396)
|||+|+..|+.+++++|++.|+
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga---------------------------------------------------------- 164 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGA---------------------------------------------------------- 164 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTC----------------------------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCC----------------------------------------------------------
Confidence 9999999999999999987665
Q ss_pred HHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhcccc
Q 037504 214 RALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVA 267 (396)
Q Consensus 214 ~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~ 267 (396)
+++.+|..|+||||+|+..++.++++.|++.|++.
T Consensus 165 -------------------~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~ 199 (222)
T 3ehr_A 165 -------------------RTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR 199 (222)
T ss_dssp -------------------CSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred -------------------CCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence 34566778889999999888889999998888873
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.89 E-value=6.3e-24 Score=186.29 Aligned_cols=120 Identities=19% Similarity=0.151 Sum_probs=80.3
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHH
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYA 102 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A 102 (396)
+.+++.+++..|+.+.+..+.. .+.++ +..|.||||+|+..|+.+++++|++ + .++ +.+|..|+||||+|
T Consensus 15 ~~~~~l~~~~~g~~~~~~~~~~-~~~~~----~~~g~t~L~~A~~~g~~~~v~~Ll~-~--~~~--~~~d~~g~t~L~~A 84 (244)
T 3ui2_A 15 GAMEYLIEWKDGHSPSWVPSSY-IAADV----VSEYETPWWTAARKADEQALSQLLE-D--RDV--DAVDENGRTALLFV 84 (244)
T ss_dssp TEEEEEEEESSCCCCEEEEGGG-SCHHH----HHHHHHHHHHHHTTTCHHHHHHTTT-T--CCT--TCBCTTSCBHHHHH
T ss_pred CccHHHHHHHcCCCcccccccc-ccccc----ccCCCCHHHHHHHcCCHHHHHHHHc-C--CCC--CCcCCCCCCHHHHH
Confidence 4455555555555544433222 12222 3457788888888888888888877 5 555 77777788888888
Q ss_pred HHcCCHHHHHHHHhcCCCCccccCCC-CCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 103 AASGSVELVKATMEGNEDITMVPQDD-KDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 103 ~~~g~~~~v~~Ll~~g~~~~~~~~~d-~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
+..|+.+++++|+++|+++ +.+| ..|+||||+|+..|+.+++++|+++++
T Consensus 85 ~~~g~~~~v~~Ll~~ga~~---~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga 135 (244)
T 3ui2_A 85 AGLGSDKCVRLLAEAGADL---DHRDMRGGLTALHMAAGYVRPEVVEALVELGA 135 (244)
T ss_dssp HHHTCHHHHHHHHHTTCCT---TCCCSSSCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred HHCCCHHHHHHHHHcCCCC---CcCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 8888888888888888774 3334 467788888888888887777776554
No 102
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.88 E-value=1.1e-22 Score=158.61 Aligned_cols=113 Identities=25% Similarity=0.347 Sum_probs=100.2
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+..|.||||+|+..|+.+++++|++.+ .++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|+||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~--~~~--~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKG--EDV--NRTLEGGRKPLHYAADCGQLEILEFLLLKGAD---INAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTT--CCT--TSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCC---TTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcC--CCc--CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC---CCcCCCCCCCH
Confidence 567999999999999999999999988 666 99999999999999999999999999999999 56677899999
Q ss_pred HHHHHhcCCHHHHHHHHhhcc-cCCCCcchhHHHHHHhhccchhhHHHHHHhcC
Q 037504 135 IVGAASLGHTEVVEFLYRETK-NSLKDDDCIELLVKLIETDSYETALHVLARKN 187 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~Ll~~~~-~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~ 187 (396)
||+|+..|+.+++++|++.++ .+..+.+| .||||+|...+
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g-------------~t~l~~A~~~~ 117 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKTVKGPDG-------------LTAFEATDNQA 117 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTCCCTTS-------------CCHHHHCCCHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCCcCCCC-------------CCHHHHhCCHH
Confidence 999999999999999999998 66677777 88888885443
No 103
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=5.8e-22 Score=176.95 Aligned_cols=126 Identities=23% Similarity=0.304 Sum_probs=114.6
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCcccccccc-----CCCCchHHHHHHHc---CCHHHHHHHHHHhhhcccchhcccC
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVI-----TRLGDTALHVAAAA---NRIDFVKKLVKKMKAENLDLAKRNR 93 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~-----~~~g~t~Lh~A~~~---g~~~~v~~Ll~~~~~~~~d~~~~d~ 93 (396)
...++|+.|+..|+.+.++.++.. +.+++... +..|.||||+|+.. |+.+++++|++.| +++ +.+|.
T Consensus 129 ~~l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~g--a~i--n~~d~ 203 (278)
T 1dcq_A 129 AKLHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNS--GNL--DKQTG 203 (278)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHC--SCT--TCCCT
T ss_pred hhhhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCC--CCc--cccCC
Confidence 446899999999999999999986 77644322 78899999999999 8999999999998 777 99999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 94 IGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 94 ~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
.|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|++.++
T Consensus 204 ~g~TpLh~A~~~g~~~~v~~Ll~~gad---~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga 262 (278)
T 1dcq_A 204 KGSTALHYCCLTDNAECLKLLLRGKAS---IEIANESGETPLDIAKRLKHEHCEELLTQALS 262 (278)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCccCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 999999999999999999999999999 66678899999999999999999999999987
No 104
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.88 E-value=1.3e-21 Score=174.77 Aligned_cols=46 Identities=17% Similarity=0.044 Sum_probs=37.7
Q ss_pred CcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcC
Q 037504 231 PDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKL 288 (396)
Q Consensus 231 ~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~ 288 (396)
+++++.+|.+|+||||+|+..|+.+++++|+++|++ .+++|.++..
T Consensus 228 gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~------------~~~~~~~v~~ 273 (278)
T 1dcq_A 228 KASIEIANESGETPLDIAKRLKHEHCEELLTQALSG------------RFNSHVHVEY 273 (278)
T ss_dssp TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTT------------CCCSSCCCCC
T ss_pred CCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCC------------CCCcceeeec
Confidence 445778889999999999999999999999999886 3566666554
No 105
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=3.8e-22 Score=147.42 Aligned_cols=91 Identities=35% Similarity=0.496 Sum_probs=52.6
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHH
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVG 137 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~ 137 (396)
|+||||+|+..|+.+++++|++.| +++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~g--~~~--n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEAG--ADV--NAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---VNAKDKNGRTPLHL 74 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCHHHH
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcC--CCC--cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCccCCCCCCHHHH
Confidence 556666666666666666666555 444 55556666666666666666666666666655 33444456666666
Q ss_pred HHhcCCHHHHHHHHhhcc
Q 037504 138 AASLGHTEVVEFLYRETK 155 (396)
Q Consensus 138 A~~~~~~~~v~~Ll~~~~ 155 (396)
|+..|+.+++++|++.|+
T Consensus 75 A~~~~~~~~~~~Ll~~ga 92 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGA 92 (93)
T ss_dssp HHHTTCHHHHHHHHHTTC
T ss_pred HHHcCCHHHHHHHHHcCC
Confidence 666666666666665543
No 106
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=4.3e-22 Score=183.92 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=117.2
Q ss_pred cccchHHHHHHHc-CCHHHHHHHHHhCccccccccC--CCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 21 RTRRLKLYRVALN-GDWARAKVIYDEHKDEIGDVIT--RLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 21 ~~g~t~Lh~A~~~-g~~~~v~~ll~~~~~~~~~~~~--~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
..+.|+||.|+.. |+.++++.||+. |++++.. + ..|.||||+|+..|+.++|++|++.| +++ +.+|..|+|
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~-~~~~~g~TpLh~Aa~~g~~~iv~~LL~~G--adv--n~~d~~G~T 270 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAH-GADVNWV-NGGQDNATPLIQATAANSLLACEFLLQNG--ANV--NQADSAGRG 270 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCC-CTTTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHc-CCCCCcc-ccccCCCCHHHHHHHCCCHHHHHHHHHcC--CCC--CCCCCCCCC
Confidence 3456899999999 999999999975 8999987 6 88999999999999999999999998 777 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 98 ALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+..+.
T Consensus 271 pLh~A~~~g~~~~v~~LL~~Gad---~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 271 PLHHATILGHTGLACLFLKRGAD---LGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCC---TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred HHHHHHHcCcHHHHHHHHHCcCC---CCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 99999999999999999999999 56677899999999999999999999998876
No 107
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.87 E-value=4.7e-22 Score=146.88 Aligned_cols=93 Identities=27% Similarity=0.392 Sum_probs=86.9
Q ss_pred ccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHH
Q 037504 22 TRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFY 101 (396)
Q Consensus 22 ~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~ 101 (396)
+|.||||+|+..|+.+++++|++. +.+++.+ |..|+||||+|+..|+.+++++|++.| +++ +.+|..|.||||+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~g--a~~--~~~d~~g~t~l~~ 74 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAG--ADV--NAKDKNGRTPLHL 74 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSCCHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCC--CccCCCCCCHHHH
Confidence 489999999999999999999985 8999988 999999999999999999999999998 776 9999999999999
Q ss_pred HHHcCCHHHHHHHHhcCCC
Q 037504 102 AAASGSVELVKATMEGNED 120 (396)
Q Consensus 102 A~~~g~~~~v~~Ll~~g~~ 120 (396)
|+..|+.+++++|+++|++
T Consensus 75 A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 75 AARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHTTCHHHHHHHHHTTCC
T ss_pred HHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999975
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.87 E-value=7.3e-22 Score=191.01 Aligned_cols=125 Identities=19% Similarity=0.224 Sum_probs=115.1
Q ss_pred cchHHHHHHHcCCHHHHHHHHHhCccccccc-----cCCCCchHHHHHHH---cCCHHHHHHHHHHhhhcccchhcccCC
Q 037504 23 RRLKLYRVALNGDWARAKVIYDEHKDEIGDV-----ITRLGDTALHVAAA---ANRIDFVKKLVKKMKAENLDLAKRNRI 94 (396)
Q Consensus 23 g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~-----~~~~g~t~Lh~A~~---~g~~~~v~~Ll~~~~~~~~d~~~~d~~ 94 (396)
..+.||.|+..|+.+.|+.||+. |++++.. .+..|.||||+||. .|+.++|++|++.| +++ |.+|..
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~g--a~v--n~~d~~ 206 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNG--GHL--DAKAAD 206 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHS--CCT--TCCCSS
T ss_pred cHHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcC--CCC--CccCCC
Confidence 34789999999999999999986 7888754 26789999999976 89999999999998 777 999999
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcc
Q 037504 95 GCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETK 155 (396)
Q Consensus 95 g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~ 155 (396)
|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..|+.+++++|+++|+
T Consensus 207 g~TpLh~A~~~g~~~~v~~Ll~~ga~---~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga 264 (497)
T 3lvq_E 207 GNTALHYAALYNQPDCLKLLLKGRAL---VGTVNEAGETALDIARKKHHKECEELLEQAQA 264 (497)
T ss_dssp SCCHHHHHTTTTCHHHHHHHHHTCCC---CSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence 99999999999999999999999999 66678899999999999999999999999998
No 109
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.87 E-value=8.2e-22 Score=182.05 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=109.3
Q ss_pred CCCchHHHHHHHc-CCHHHHHHHHHHhhhcccchhccc--CCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCC
Q 037504 56 RLGDTALHVAAAA-NRIDFVKKLVKKMKAENLDLAKRN--RIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRM 132 (396)
Q Consensus 56 ~~g~t~Lh~A~~~-g~~~~v~~Ll~~~~~~~~d~~~~d--~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~ 132 (396)
..+.|+||.|+.. |+.++++.|++.| +++ +..+ ..|.||||+|+..|+.+++++|+++|++ ++..|..|+
T Consensus 197 ~~~~t~L~~Aa~~~g~~~~v~~LL~~G--adv--n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gad---vn~~d~~G~ 269 (368)
T 3jue_A 197 LHPGALLFRASGHPPSLPTMADALAHG--ADV--NWVNGGQDNATPLIQATAANSLLACEFLLQNGAN---VNQADSAGR 269 (368)
T ss_dssp CCHHHHHHHHTSSSCCHHHHHHHHHTT--CCT--TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSC
T ss_pred CCCCcHHHHHHHccCCHHHHHHHHHcC--CCC--CccccccCCCCHHHHHHHCCCHHHHHHHHHcCCC---CCCCCCCCC
Confidence 4567899999999 9999999999988 666 7777 8899999999999999999999999998 556677899
Q ss_pred cHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhh
Q 037504 133 LPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVEN 212 (396)
Q Consensus 133 tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (396)
||||+|+..|+.+++++|+++++
T Consensus 270 TpLh~A~~~g~~~~v~~LL~~Ga--------------------------------------------------------- 292 (368)
T 3jue_A 270 GPLHHATILGHTGLACLFLKRGA--------------------------------------------------------- 292 (368)
T ss_dssp CHHHHHHHHTCHHHHHHHHHTTC---------------------------------------------------------
T ss_pred CHHHHHHHcCcHHHHHHHHHCcC---------------------------------------------------------
Confidence 99999999999999999987654
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhcCC
Q 037504 213 ERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGKLP 289 (396)
Q Consensus 213 ~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~~~ 289 (396)
+++.+|.+|.||||+|+..++.+++++|+..+..... ....+..+.|+|+++....
T Consensus 293 --------------------d~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~-~~~~~~~~~t~l~i~~~~~ 348 (368)
T 3jue_A 293 --------------------DLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAE-AAQGQAGDETYLDIFRDFS 348 (368)
T ss_dssp --------------------CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC------------------------
T ss_pred --------------------CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccc-ccccCCCCCCHHHHHHHHH
Confidence 3567788999999999999999999999988754321 3456678899999877654
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.86 E-value=2e-21 Score=187.89 Aligned_cols=136 Identities=15% Similarity=0.137 Sum_probs=99.4
Q ss_pred CchHHHHHHHcCCHHHHHHHHHHhhhcccchhcc------cCCCCcHHHHHHH---cCCHHHHHHHHhcCCCCccccCCC
Q 037504 58 GDTALHVAAAANRIDFVKKLVKKMKAENLDLAKR------NRIGCTALFYAAA---SGSVELVKATMEGNEDITMVPQDD 128 (396)
Q Consensus 58 g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~------d~~g~tpLh~A~~---~g~~~~v~~Ll~~g~~~~~~~~~d 128 (396)
..+.||.|+..|+.++|+.|++.| +++ +.+ |..|.||||+|++ .|+.+++++|+++|++ ++.+|
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g--~~~--n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~---vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANG--QDF--GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH---LDAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTT--CCS--SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC---TTCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhc--ccc--cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC---CCccC
Confidence 346788888888888888888877 555 555 6778888888865 7788888888888887 55566
Q ss_pred CCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHHHhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccch
Q 037504 129 KDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVKLIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAK 208 (396)
Q Consensus 129 ~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (396)
..|+||||+|+..|+.+++++|+++|+
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga----------------------------------------------------- 231 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRA----------------------------------------------------- 231 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCC-----------------------------------------------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCC-----------------------------------------------------
Confidence 678888888888888888888876654
Q ss_pred hhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHHHcCcHHHHHHHHhhccccccccccccCCCCchhhhhhc
Q 037504 209 AVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAVSNRMREIFKFIFEISSVADLLFDSKDKDGNNILHLAGK 287 (396)
Q Consensus 209 ~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~TpLh~A~~ 287 (396)
+++.+|..|+||||+|+..|+.+++++|+++|++ ++. ||+|.+..
T Consensus 232 ------------------------~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~----~~~------~~~h~~~~ 276 (497)
T 3lvq_E 232 ------------------------LVGTVNEAGETALDIARKKHHKECEELLEQAQAG----TFA------FPLHVDYS 276 (497)
T ss_dssp ------------------------CCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----------------------
T ss_pred ------------------------CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCC----CCC------Ccceeecc
Confidence 4677888999999999999999999999999998 544 57776543
No 111
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.84 E-value=1.6e-21 Score=150.03 Aligned_cols=107 Identities=23% Similarity=0.260 Sum_probs=71.4
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcH
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTA 98 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tp 98 (396)
++..|.||||+|+..|+.++++.|++. +.+++.. |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.||
T Consensus 5 ~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g--~~~--~~~d~~g~tp 78 (115)
T 2l6b_A 5 GSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKG--ADV--NARSKDGNTP 78 (115)
T ss_dssp CSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTT--CCT--TCCCTTCCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcC--CCC--cccCCCCCCH
Confidence 455667777777777777777776654 6666666 667777777777777777777777766 555 6677777777
Q ss_pred HHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 99 LFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
||+|+..|+.+++++|+++|++ ++.++..|.+|
T Consensus 79 l~~A~~~~~~~~~~~Ll~~ga~---~n~~~~~~~~~ 111 (115)
T 2l6b_A 79 EHLAKKNGHHEIVKLLDAKGAD---VNARSWGSSHH 111 (115)
T ss_dssp THHHHTTTCHHHHHHHHTTSSS---HHHHSCCCC--
T ss_pred HHHHHHCCCHHHHHHHHHcCCC---CCcCCcccccc
Confidence 7777777777777777777776 33334455554
No 112
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.83 E-value=7e-21 Score=146.45 Aligned_cols=108 Identities=27% Similarity=0.291 Sum_probs=75.8
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcHHHHHHhcCCHHHHHHHHhhcccCCCCcchhHHHHH
Q 037504 90 KRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLPIVGAASLGHTEVVEFLYRETKNSLKDDDCIELLVK 169 (396)
Q Consensus 90 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~g~~~l~~ 169 (396)
.+|.+|+||||+|+..|+.+++++|+++|++ ++.+|..|.||||+|+..++.+++++|++.++
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~-------------- 66 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD---VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGA-------------- 66 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC---SSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTC--------------
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---CCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCC--------------
Confidence 4566777777777777777777777777776 44455677777777777777777777776543
Q ss_pred HhhccchhhHHHHHHhcCCCCCCCCCcchhhhhhhccchhhhhHHHHHHHHHHHHHHHHhCCcccccccCCCCcHHHHHH
Q 037504 170 LIETDSYETALHVLARKNLTSSNQNPRGIFQRYFNLGAKAVENERALELVELLWENFLFKYPDLIWKFDENGHTIFHIAV 249 (396)
Q Consensus 170 ~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~~~~i~~~d~~g~t~Lh~A~ 249 (396)
+++.+|..|+||||+|+
T Consensus 67 ---------------------------------------------------------------~~~~~d~~g~tpl~~A~ 83 (115)
T 2l6b_A 67 ---------------------------------------------------------------DVNARSKDGNTPEHLAK 83 (115)
T ss_dssp ---------------------------------------------------------------CTTCCCTTCCCTTHHHH
T ss_pred ---------------------------------------------------------------CCcccCCCCCCHHHHHH
Confidence 24455666777777777
Q ss_pred HcCcHHHHHHHHhhccccccccccccCCCCch
Q 037504 250 SNRMREIFKFIFEISSVADLLFDSKDKDGNNI 281 (396)
Q Consensus 250 ~~~~~~~v~~Ll~~g~~~~~~~n~~d~~g~Tp 281 (396)
..++.+++++|+++|++ +|.++..|.||
T Consensus 84 ~~~~~~~~~~Ll~~ga~----~n~~~~~~~~~ 111 (115)
T 2l6b_A 84 KNGHHEIVKLLDAKGAD----VNARSWGSSHH 111 (115)
T ss_dssp TTTCHHHHHHHHTTSSS----HHHHSCCCC--
T ss_pred HCCCHHHHHHHHHcCCC----CCcCCcccccc
Confidence 77777777777777777 66777777776
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=4e-19 Score=135.41 Aligned_cols=89 Identities=28% Similarity=0.297 Sum_probs=56.6
Q ss_pred CCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCcHHHHHHHcCCHHHHHHHHhcCCCCccccCCCCCCCcH
Q 037504 55 TRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCTALFYAAASGSVELVKATMEGNEDITMVPQDDKDRMLP 134 (396)
Q Consensus 55 ~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g~~~~~~~~~d~~g~tp 134 (396)
+.+|.||||+|+..|+.+++++|++.| +++ +.+|..|+||||+|+..|+.+++++|+++|++ ++.+|..|.||
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g--~~i--~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~---~~~~d~~g~tp 93 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANG--ADV--AAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD---VXAQDKFGKTA 93 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTT--CCT--TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC---TTCCCTTSCCH
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcC--CCC--CccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC---ccccccCCCcH
Confidence 556666666666666666666666665 444 66666666666666666666666666666666 34445566666
Q ss_pred HHHHHhcCCHHHHHHH
Q 037504 135 IVGAASLGHTEVVEFL 150 (396)
Q Consensus 135 Lh~A~~~~~~~~v~~L 150 (396)
||+|+..|+.+++++|
T Consensus 94 l~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 94 FDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHTCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHh
Confidence 6666666666666654
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.77 E-value=1.1e-18 Score=132.95 Aligned_cols=92 Identities=20% Similarity=0.281 Sum_probs=83.9
Q ss_pred cccccccchHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCC
Q 037504 17 VEEIRTRRLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGC 96 (396)
Q Consensus 17 ~~~~~~g~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~ 96 (396)
...+.+|.|+||+|+..|+.++++.|++. +.+++.+ |..|.||||+|+..|+.+++++|++.| +++ +.+|..|.
T Consensus 18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~g--a~~--~~~d~~g~ 91 (110)
T 2zgd_A 18 SHMGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAG--ADV--XAQDKFGK 91 (110)
T ss_dssp ----CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTT--CCT--TCCCTTSC
T ss_pred cccCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcC--CCc--cccccCCC
Confidence 45688899999999999999999999975 8999988 899999999999999999999999998 776 99999999
Q ss_pred cHHHHHHHcCCHHHHHHH
Q 037504 97 TALFYAAASGSVELVKAT 114 (396)
Q Consensus 97 tpLh~A~~~g~~~~v~~L 114 (396)
||||+|+..|+.+++++|
T Consensus 92 tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHh
Confidence 999999999999999987
No 115
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=56.29 E-value=70 Score=28.31 Aligned_cols=96 Identities=10% Similarity=0.083 Sum_probs=59.3
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHh-CccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDE-HKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
.|..|.-.|......++.+....++.. .+..+....|..|+..+.-....+..+....+++.-. ..+---..+..|.-
T Consensus 33 ~dq~gsR~lQ~~l~~~~~~~~~~i~~ei~~~~~~L~~d~~gn~vvQklle~~~~~~~~~i~~~i~-g~~~~l~~~~~G~r 111 (351)
T 3gvo_A 33 QDQHGSRFIQQKLERATPAERQIVFNEILQAAYQLMTDVFGNYVIQKFFEFGSLDQKLALATRIR-GHVLPLALQMYGCR 111 (351)
T ss_dssp TSHHHHHHHHHHHHHCCHHHHHHHHHHHGGGHHHHHTSTTHHHHHHHHHHHCCHHHHHHHHHHHT-TCHHHHHTSTTHHH
T ss_pred cCCcchHHHHHHHhhCCHHHHHHHHHHHHHhHHHHHhChhhhHHHHHHHhhCCHHHHHHHHHHHH-hhHHHHhhCHHhHH
Confidence 455666677777777777666665543 1222333448888888888888888887777776541 12211245677777
Q ss_pred HHHHHHHcCCHHHHHHHH
Q 037504 98 ALFYAAASGSVELVKATM 115 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll 115 (396)
.+.-+......+-...++
T Consensus 112 vvQk~le~~~~~~~~~i~ 129 (351)
T 3gvo_A 112 VIQKALESISSDQQSEMV 129 (351)
T ss_dssp HHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHH
Confidence 777666666555444444
No 116
>3gvo_A Pumilio 2, pumilio homolog 2; RNA-binding, PUF domain, RNA binding protein; HET: DTD; 1.60A {Mus musculus} SCOP: a.118.1.8 PDB: 3gvt_A 3q0q_A 3q0r_A 3q0s_A 1ib2_A 1m8w_A 1m8x_A 1m8y_A 1m8z_A 3q0l_A 3q0m_A 3q0n_A 3q0o_A 3q0p_A 2yjy_A 3bsx_A 3bsb_A 3h3d_X
Probab=33.50 E-value=81 Score=27.90 Aligned_cols=153 Identities=10% Similarity=0.045 Sum_probs=81.6
Q ss_pred cccccchHHHHHHHcCCHHHHHHHHHh-CccccccccCCCCchHHHHHHHcCCHHHHHHHHHHhhhcccchhcccCCCCc
Q 037504 19 EIRTRRLKLYRVALNGDWARAKVIYDE-HKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKKMKAENLDLAKRNRIGCT 97 (396)
Q Consensus 19 ~~~~g~t~Lh~A~~~g~~~~v~~ll~~-~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~~d~~~~d~~g~t 97 (396)
.|..|+..+-.....|+.+....+++. .|.-+....+..|.-.+..+......+-...+++.- ...+---..|..|+.
T Consensus 69 ~d~~gn~vvQklle~~~~~~~~~i~~~i~g~~~~l~~~~~G~rvvQk~le~~~~~~~~~i~~el-~~~~~~L~~d~~Gn~ 147 (351)
T 3gvo_A 69 TDVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMVKEL-DGHVLKCVKDQNGNH 147 (351)
T ss_dssp TSTTHHHHHHHHHHHCCHHHHHHHHHHHTTCHHHHHTSTTHHHHHHHHHHHSCHHHHHHHHGGG-TTCHHHHHHSTTHHH
T ss_pred hChhhhHHHHHHHhhCCHHHHHHHHHHHHhhHHHHhhCHHhHHHHHHHHHhCCHHHHHHHHHHh-hhhHHHHHHhhhhhH
Confidence 677888888888888888777777664 233333344777877787777777766555555443 122211246677777
Q ss_pred HHHHHHHcCCHHHHHHHHhcCC-CCccccCCCCCCCcHHHHHHhcCCHH----HHHHHHhhcccCCCCcchhHHHHHHhh
Q 037504 98 ALFYAAASGSVELVKATMEGNE-DITMVPQDDKDRMLPIVGAASLGHTE----VVEFLYRETKNSLKDDDCIELLVKLIE 172 (396)
Q Consensus 98 pLh~A~~~g~~~~v~~Ll~~g~-~~~~~~~~d~~g~tpLh~A~~~~~~~----~v~~Ll~~~~~~~~~~~g~~~l~~~~~ 172 (396)
.+......+..+..+.+++.-. .+. --..+..|...+.-+......+ +++.|...-..-..+..|.-.+..++.
T Consensus 148 ViQk~l~~~~~~~~~~i~~~~~~~~~-~ls~~~~G~~Vvq~~le~~~~~~~~~ii~~l~~~~~~L~~d~~Gn~ViQ~~l~ 226 (351)
T 3gvo_A 148 VVQKCIECVQPQSLQFIIDAFKGQVF-VLSTHPYGCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLE 226 (351)
T ss_dssp HHHHHHHHSCGGGTHHHHHHTTTTHH-HHHTSTTHHHHHHHHHHHSCHHHHHHHHHHHHTTHHHHHTSTTHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHH-HHHhCcHhHHHHHHHHHHCCHHHHHHHHHHHhhhHHhcCCCchHHHHHHHHHH
Confidence 6666665554443333333211 110 1112336666666555554433 233332221122356666555555544
Q ss_pred c
Q 037504 173 T 173 (396)
Q Consensus 173 ~ 173 (396)
.
T Consensus 227 ~ 227 (351)
T 3gvo_A 227 H 227 (351)
T ss_dssp H
T ss_pred h
Confidence 3
No 117
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=29.85 E-value=1e+02 Score=27.88 Aligned_cols=53 Identities=21% Similarity=0.278 Sum_probs=40.3
Q ss_pred HHHHHcCCHHHHHHHHHhCcccccccc-------------CCCCchHHHHHHHcCCHHHHHHHHHHh
Q 037504 28 YRVALNGDWARAKVIYDEHKDEIGDVI-------------TRLGDTALHVAAAANRIDFVKKLVKKM 81 (396)
Q Consensus 28 h~A~~~g~~~~v~~ll~~~~~~~~~~~-------------~~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 81 (396)
...+..|+...|+..+..+| +.+.+. -.-|.|.+|+|++..+.+++..|+..+
T Consensus 27 c~gv~e~~~~~ve~y~~~gg-~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~~ 92 (454)
T 3zrh_A 27 CVGVVEGDLAAIEAYKSSGG-DIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEV 92 (454)
T ss_dssp HHHHHHTCHHHHHHHHTTTC-CTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHHH
T ss_pred hHHHHcCChhHHHHHHhcCC-chhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhcc
Confidence 45677899999999887644 322211 245999999999999999999999754
No 118
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=26.98 E-value=2.3e+02 Score=22.26 Aligned_cols=51 Identities=8% Similarity=0.057 Sum_probs=31.0
Q ss_pred chHHHHHHHcCCHHHHHHHHHhCccccccccCCCCchHHHHHHHcCCHHHHHHHHHH
Q 037504 24 RLKLYRVALNGDWARAKVIYDEHKDEIGDVITRLGDTALHVAAAANRIDFVKKLVKK 80 (396)
Q Consensus 24 ~t~Lh~A~~~g~~~~v~~ll~~~~~~~~~~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~ 80 (396)
.+-+-+|...|+.+....+.+.- .+ .......=..|...|+.++++....+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~l-~~-----~~~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKKL-ND-----SITWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-CC-----HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHh-CC-----HHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 56778899999999988887641 10 01122233455566777666665554
No 119
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=26.85 E-value=45 Score=18.69 Aligned_cols=17 Identities=29% Similarity=0.264 Sum_probs=11.7
Q ss_pred HHHHHHcCCHHHHHHHH
Q 037504 99 LFYAAASGSVELVKATM 115 (396)
Q Consensus 99 Lh~A~~~g~~~~v~~Ll 115 (396)
+..||..|+.+.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 46677777777777664
Done!