BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037506
MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG
VTIIENLCDVGQVTSSQRMRSGRSLGHHLIN

High Scoring Gene Products

Symbol, full name Information P value
AT1G75280 protein from Arabidopsis thaliana 2.3e-08
AT4G39230 protein from Arabidopsis thaliana 6.3e-08
AT1G75290 protein from Arabidopsis thaliana 2.3e-06
PRR1
pinoresinol reductase 1
protein from Arabidopsis thaliana 3.8e-06
AT1G75300 protein from Arabidopsis thaliana 5.1e-06
AT1G19540 protein from Arabidopsis thaliana 1.0e-05
AT4G34540 protein from Arabidopsis thaliana 4.5e-05
PRR2
pinoresinol reductase 2
protein from Arabidopsis thaliana 0.00046

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037506
        (91 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2025192 - symbol:AT1G75280 species:3702 "Arabi...   133  2.3e-08   1
TAIR|locus:2136383 - symbol:AT4G39230 species:3702 "Arabi...   129  6.3e-08   1
TAIR|locus:2025197 - symbol:AT1G75290 species:3702 "Arabi...   115  2.3e-06   1
TAIR|locus:2031730 - symbol:PRR1 "pinoresinol reductase 1...   113  3.8e-06   1
TAIR|locus:2025167 - symbol:AT1G75300 species:3702 "Arabi...   112  5.1e-06   1
TAIR|locus:2016482 - symbol:AT1G19540 species:3702 "Arabi...   109  1.0e-05   1
TAIR|locus:2139494 - symbol:AT4G34540 species:3702 "Arabi...   103  4.5e-05   1
TAIR|locus:2119455 - symbol:PRR2 "pinoresinol reductase 2...    94  0.00046   1


>TAIR|locus:2025192 [details] [associations]
            symbol:AT1G75280 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0046686 "response to cadmium ion"
            evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
            [GO:0006979 "response to oxidative stress" evidence=IGI;IEP]
            InterPro:IPR016040 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0005886 GO:GO:0005737 GO:GO:0046686 GO:GO:0006979
            GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0016491 EMBL:AC025814
            EMBL:Z49777 EMBL:AY065395 EMBL:AY117175 EMBL:AY084851
            IPI:IPI00517618 PIR:C96783 PIR:S57613 RefSeq:NP_565107.1
            UniGene:At.18297 ProteinModelPortal:P52577 SMR:P52577 STRING:P52577
            PaxDb:P52577 PRIDE:P52577 ProMEX:P52577 EnsemblPlants:AT1G75280.1
            GeneID:843865 KEGG:ath:AT1G75280 TAIR:At1g75280 eggNOG:NOG126691
            HOGENOM:HOG000237415 InParanoid:P52577 KO:K00224 OMA:VLSINHA
            PhylomeDB:P52577 ProtClustDB:CLSN2682501 Genevestigator:P52577
            GermOnline:AT1G75280 InterPro:IPR008030 Pfam:PF05368 Uniprot:P52577
        Length = 310

 Score = 133 (51.9 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 27/58 (46%), Positives = 39/58 (67%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTGY+GK++V+AS  +GH+TF   R  T  S P K +  + F+ +GVTI+
Sbjct:     5 KSKILVIGGTGYIGKFLVEASAKAGHSTFALVREATL-SDPVKGKTVQSFKDLGVTIL 61


>TAIR|locus:2136383 [details] [associations]
            symbol:AT4G39230 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0032442 "phenylcoumaran benzylic
            ether reductase activity" evidence=ISS] [GO:0046686 "response to
            cadmium ion" evidence=IEP] InterPro:IPR016040 GO:GO:0046686
            EMBL:CP002687 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AL161594
            EMBL:AL050351 InterPro:IPR008030 Pfam:PF05368 EMBL:AY150409
            IPI:IPI00541617 PIR:T08571 RefSeq:NP_195634.1 UniGene:At.31110
            ProteinModelPortal:Q9T030 SMR:Q9T030 PRIDE:Q9T030
            EnsemblPlants:AT4G39230.1 GeneID:830078 KEGG:ath:AT4G39230
            TAIR:At4g39230 InParanoid:Q9T030 OMA:VISTVGH PhylomeDB:Q9T030
            ProtClustDB:CLSN2915976 Genevestigator:Q9T030 GO:GO:0032442
            Uniprot:Q9T030
        Length = 308

 Score = 129 (50.5 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 33/88 (37%), Positives = 50/88 (56%)

Query:     6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVT-II 64
             +K K L  GGTGY+GKY+V+AS  SGH T V  R  T  S PS+    + F+ +GV  ++
Sbjct:     3 SKSKILFIGGTGYIGKYIVEASARSGHPTLVLVRNSTLTS-PSRSSTIENFKNLGVQFLL 61

Query:    65 ENLCDVGQVTSSQRMRSG--RSLGHHLI 90
              +L D   + +S +       ++GH L+
Sbjct:    62 GDLDDHTSLVNSIKQADVVISTVGHSLL 89


>TAIR|locus:2025197 [details] [associations]
            symbol:AT1G75290 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0016651 "oxidoreductase activity,
            acting on NAD(P)H" evidence=ISS] InterPro:IPR016040 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.40.50.720 eggNOG:COG0702
            ProtClustDB:CLSN2682501 InterPro:IPR008030 Pfam:PF05368
            EMBL:BT033106 IPI:IPI00521965 RefSeq:NP_177664.4 UniGene:At.52521
            ProteinModelPortal:B3LFB7 SMR:B3LFB7 PaxDb:B3LFB7 PRIDE:B3LFB7
            EnsemblPlants:AT1G75290.1 GeneID:843866 KEGG:ath:AT1G75290
            TAIR:At1g75290 OMA:IDEYLSY PhylomeDB:B3LFB7 ArrayExpress:B3LFB7
            Genevestigator:B3LFB7 Uniprot:B3LFB7
        Length = 318

 Score = 115 (45.5 bits), Expect = 2.3e-06, P = 2.3e-06
 Identities = 23/58 (39%), Positives = 38/58 (65%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTG++GK +++ASV +GH+T    R  +  S P+K +  + F+  GVT++
Sbjct:     5 KSKILVIGGTGHIGKLIIEASVKAGHSTLALVREASL-SDPNKGKTVQNFKDFGVTLL 61


>TAIR|locus:2031730 [details] [associations]
            symbol:PRR1 "pinoresinol reductase 1" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0010283
            "pinoresinol reductase activity" evidence=ISS;IDA] [GO:0009807
            "lignan biosynthetic process" evidence=IDA] [GO:0010413
            "glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
            biosynthetic process" evidence=RCA] InterPro:IPR016040
            EMBL:CP002684 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AC084165
            InterPro:IPR008030 Pfam:PF05368 GO:GO:0010283 GO:GO:0009807
            EMBL:AY065214 EMBL:AY096520 IPI:IPI00517929 PIR:D86445
            RefSeq:NP_174490.1 UniGene:At.28661 ProteinModelPortal:Q9FVQ6
            SMR:Q9FVQ6 IntAct:Q9FVQ6 STRING:Q9FVQ6 PRIDE:Q9FVQ6
            EnsemblPlants:AT1G32100.1 GeneID:840102 KEGG:ath:AT1G32100
            TAIR:At1g32100 InParanoid:Q9FVQ6 OMA:HFRSHNI PhylomeDB:Q9FVQ6
            ProtClustDB:CLSN2682613 ArrayExpress:Q9FVQ6 Genevestigator:Q9FVQ6
            Uniprot:Q9FVQ6
        Length = 317

 Score = 113 (44.8 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 24/65 (36%), Positives = 38/65 (58%)

Query:     2 EGKNT-KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
             E K T K + L+ G TGY+GK +V+A ++ GH T+V  RP        K+++   F+ +G
Sbjct:     3 ESKRTEKTRVLVVGATGYIGKRIVRACLAEGHETYVLQRPEI-GLEIEKVQLFLSFKKLG 61

Query:    61 VTIIE 65
               I+E
Sbjct:    62 ARIVE 66


>TAIR|locus:2025167 [details] [associations]
            symbol:AT1G75300 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0016651 "oxidoreductase activity,
            acting on NAD(P)H" evidence=ISS] InterPro:IPR016040 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0000166 Gene3D:3.40.50.720
            EMBL:AC025814 HOGENOM:HOG000237415 ProtClustDB:CLSN2682501
            InterPro:IPR008030 Pfam:PF05368 EMBL:BT008345 EMBL:AK117797
            IPI:IPI00518402 PIR:E96783 RefSeq:NP_177665.1 UniGene:At.34791
            ProteinModelPortal:Q9FRM1 SMR:Q9FRM1 PaxDb:Q9FRM1 PRIDE:Q9FRM1
            EnsemblPlants:AT1G75300.1 GeneID:843867 KEGG:ath:AT1G75300
            TAIR:At1g75300 eggNOG:NOG237174 InParanoid:Q9FRM1 OMA:LEKTHIS
            PhylomeDB:Q9FRM1 Genevestigator:Q9FRM1 Uniprot:Q9FRM1
        Length = 322

 Score = 112 (44.5 bits), Expect = 5.1e-06, P = 5.1e-06
 Identities = 23/58 (39%), Positives = 37/58 (63%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K K L+ GGTGY+G+++V+ S  +G+ TF   R  +  S P K +  + F+ +GVTI+
Sbjct:     5 KSKILVIGGTGYMGEFIVEGSAKAGNPTFALVREASL-SDPVKSKTIQSFKDLGVTIL 61


>TAIR|locus:2016482 [details] [associations]
            symbol:AT1G19540 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] InterPro:IPR016040 EMBL:CP002684
            GO:GO:0000166 Gene3D:3.40.50.720 HOGENOM:HOG000237415
            InterPro:IPR008030 Pfam:PF05368 EMBL:BT024779 IPI:IPI00520681
            RefSeq:NP_173385.1 UniGene:At.47004 ProteinModelPortal:Q29PX7
            SMR:Q29PX7 EnsemblPlants:AT1G19540.1 GeneID:838541
            KEGG:ath:AT1G19540 TAIR:At1g19540 eggNOG:NOG280958
            InParanoid:Q29PX7 OMA:EEDIVAY PhylomeDB:Q29PX7
            ProtClustDB:CLSN2912800 Genevestigator:Q29PX7 Uniprot:Q29PX7
        Length = 310

 Score = 109 (43.4 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 23/56 (41%), Positives = 34/56 (60%)

Query:     9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTII 64
             K L+ G TG +GK +V+ S  SGH TF   R  +  S P K ++ + F+ +GVTI+
Sbjct:     4 KILVIGATGLIGKVLVEESAKSGHATFALVREASL-SDPVKAQLVERFKDLGVTIL 58


>TAIR|locus:2139494 [details] [associations]
            symbol:AT4G34540 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0010283 "pinoresinol reductase
            activity" evidence=ISS] InterPro:IPR016040 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
            EMBL:AL161585 EMBL:AL023094 UniGene:At.48937 HOGENOM:HOG000237415
            InterPro:IPR008030 Pfam:PF05368 IPI:IPI00544434 PIR:T05274
            RefSeq:NP_195180.1 ProteinModelPortal:O65679 SMR:O65679
            PaxDb:O65679 PRIDE:O65679 EnsemblPlants:AT4G34540.1 GeneID:829605
            KEGG:ath:AT4G34540 TAIR:At4g34540 eggNOG:NOG292749
            InParanoid:O65679 OMA:GTQLYPH PhylomeDB:O65679
            ProtClustDB:CLSN2685910 ArrayExpress:O65679 Genevestigator:O65679
            GO:GO:0010283 Uniprot:O65679
        Length = 306

 Score = 103 (41.3 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 28/77 (36%), Positives = 40/77 (51%)

Query:     1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIG 60
             ME +  K + LI G TG LG Y+ + S+ SGH TF   R  T +    KL   K     G
Sbjct:     1 MEEEKKKSRVLIIGATGRLGNYLTRFSIESGHPTFALIRNTTLSD---KL---KSLSDAG 54

Query:    61 VTIIE-NLCDVGQVTSS 76
             VT+++ +L D G +  +
Sbjct:    55 VTLLKGSLEDEGSLAEA 71


>TAIR|locus:2119455 [details] [associations]
            symbol:PRR2 "pinoresinol reductase 2" species:3702
            "Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0010283
            "pinoresinol reductase activity" evidence=ISS;IDA] [GO:0009807
            "lignan biosynthetic process" evidence=IDA] [GO:0009506
            "plasmodesma" evidence=IDA] [GO:0006826 "iron ion transport"
            evidence=RCA] [GO:0009611 "response to wounding" evidence=RCA]
            [GO:0009805 "coumarin biosynthetic process" evidence=RCA]
            [GO:0009963 "positive regulation of flavonoid biosynthetic process"
            evidence=RCA] [GO:0010106 "cellular response to iron ion
            starvation" evidence=RCA] [GO:0010167 "response to nitrate"
            evidence=RCA] [GO:0015706 "nitrate transport" evidence=RCA]
            InterPro:IPR016040 GO:GO:0009506 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0000166 Gene3D:3.40.50.720
            EMBL:AL035528 EMBL:AL161537 HOGENOM:HOG000237415 KO:K00224
            InterPro:IPR008030 Pfam:PF05368 GO:GO:0010283 GO:GO:0009807
            ProtClustDB:CLSN2682613 EMBL:BT002882 EMBL:BT004406 IPI:IPI00540919
            PIR:T05235 RefSeq:NP_193102.1 UniGene:At.27534
            ProteinModelPortal:Q9SVP6 SMR:Q9SVP6 STRING:Q9SVP6 PaxDb:Q9SVP6
            PRIDE:Q9SVP6 EnsemblPlants:AT4G13660.1 GeneID:827000
            KEGG:ath:AT4G13660 TAIR:At4g13660 eggNOG:NOG81420 InParanoid:Q9SVP6
            OMA:HFRTHNI PhylomeDB:Q9SVP6 Genevestigator:Q9SVP6 Uniprot:Q9SVP6
        Length = 317

 Score = 94 (38.1 bits), Expect = 0.00046, P = 0.00046
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query:     7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIE 65
             K + L+ GGTG LG+ +V A ++ GH T+V  RP        K+++   F+ +G  ++E
Sbjct:     9 KTRVLVVGGTGSLGRRIVSACLAEGHETYVLQRPEI-GVDIEKVQLLLSFKRLGAHLVE 66


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.134   0.385    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       91        91   0.00091  102 3  11 22  0.37    30
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  8
  No. of states in DFA:  496 (53 KB)
  Total size of DFA:  95 KB (2069 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.05u 0.18s 9.23t   Elapsed:  00:00:01
  Total cpu time:  9.06u 0.18s 9.24t   Elapsed:  00:00:01
  Start:  Mon May 20 22:45:59 2013   End:  Mon May 20 22:46:00 2013

Back to top