Query 037506
Match_columns 91
No_of_seqs 208 out of 1828
Neff 8.1
Searched_HMMs 46136
Date Fri Mar 29 12:57:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037506.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037506hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1502 Flavonol reductase/cin 99.6 1.7E-14 3.6E-19 102.2 8.2 70 6-78 5-76 (327)
2 CHL00194 ycf39 Ycf39; Provisio 99.5 9.2E-14 2E-18 97.2 6.7 62 8-78 1-62 (317)
3 COG1087 GalE UDP-glucose 4-epi 99.4 1.7E-12 3.8E-17 91.2 7.2 65 8-80 1-65 (329)
4 PRK15181 Vi polysaccharide bio 99.4 3.4E-12 7.4E-17 90.4 8.4 72 5-78 13-88 (348)
5 TIGR01472 gmd GDP-mannose 4,6- 99.4 4.1E-12 8.9E-17 89.5 8.2 71 8-79 1-75 (343)
6 PLN02427 UDP-apiose/xylose syn 99.4 3.2E-12 7E-17 91.5 7.5 71 2-78 8-84 (386)
7 PLN02662 cinnamyl-alcohol dehy 99.3 4.9E-12 1.1E-16 87.8 8.0 69 7-78 4-74 (322)
8 PF13460 NAD_binding_10: NADH( 99.3 9.3E-12 2E-16 80.4 8.4 59 10-79 1-59 (183)
9 PLN00198 anthocyanidin reducta 99.3 7.5E-12 1.6E-16 88.0 8.5 71 5-78 7-78 (338)
10 PLN02572 UDP-sulfoquinovose sy 99.3 8.8E-12 1.9E-16 91.4 9.1 76 4-79 44-133 (442)
11 PLN02986 cinnamyl-alcohol dehy 99.3 1.2E-11 2.7E-16 86.2 8.9 70 6-78 4-75 (322)
12 PLN02583 cinnamoyl-CoA reducta 99.3 1E-11 2.3E-16 86.3 8.5 70 6-78 5-76 (297)
13 PLN02650 dihydroflavonol-4-red 99.3 1E-11 2.2E-16 87.7 8.5 71 5-78 3-75 (351)
14 PRK12828 short chain dehydroge 99.3 3.6E-11 7.8E-16 79.8 9.2 74 1-79 1-74 (239)
15 PLN02657 3,8-divinyl protochlo 99.3 2.5E-11 5.4E-16 87.7 8.8 74 5-79 58-131 (390)
16 PLN02653 GDP-mannose 4,6-dehyd 99.3 2.6E-11 5.6E-16 85.3 8.4 75 3-78 2-79 (340)
17 PRK06180 short chain dehydroge 99.3 3.5E-11 7.7E-16 82.5 8.8 75 6-86 3-77 (277)
18 PRK10675 UDP-galactose-4-epime 99.3 3.6E-11 7.7E-16 84.1 8.4 69 8-78 1-69 (338)
19 PLN02896 cinnamyl-alcohol dehy 99.3 2.4E-11 5.2E-16 86.0 7.6 69 5-78 8-77 (353)
20 PRK13394 3-hydroxybutyrate deh 99.3 4.3E-11 9.4E-16 80.7 8.5 75 1-80 1-77 (262)
21 PLN02214 cinnamoyl-CoA reducta 99.3 3.9E-11 8.4E-16 85.0 8.4 69 6-78 9-79 (342)
22 PLN02686 cinnamoyl-CoA reducta 99.2 3.6E-11 7.8E-16 86.1 8.1 68 5-78 51-126 (367)
23 PLN02989 cinnamyl-alcohol dehy 99.2 6.1E-11 1.3E-15 82.8 8.8 69 7-78 5-75 (325)
24 TIGR02622 CDP_4_6_dhtase CDP-g 99.2 5.1E-11 1.1E-15 84.2 8.5 69 6-78 3-71 (349)
25 KOG1371 UDP-glucose 4-epimeras 99.2 3.6E-11 7.8E-16 85.1 7.4 72 7-80 2-75 (343)
26 TIGR03466 HpnA hopanoid-associ 99.2 3.7E-11 8E-16 83.2 7.4 62 8-78 1-62 (328)
27 PRK12825 fabG 3-ketoacyl-(acyl 99.2 6.2E-11 1.3E-15 78.8 8.2 72 5-80 4-77 (249)
28 PRK12823 benD 1,6-dihydroxycyc 99.2 7.9E-11 1.7E-15 79.6 8.6 74 1-80 2-77 (260)
29 PRK09135 pteridine reductase; 99.2 5.8E-11 1.3E-15 79.3 7.8 74 6-80 5-78 (249)
30 TIGR03649 ergot_EASG ergot alk 99.2 2.4E-11 5.3E-16 83.5 6.1 58 9-78 1-58 (285)
31 PRK12826 3-ketoacyl-(acyl-carr 99.2 6.2E-11 1.3E-15 79.3 7.7 71 5-80 4-76 (251)
32 PRK12429 3-hydroxybutyrate deh 99.2 7.5E-11 1.6E-15 79.2 8.1 70 5-79 2-73 (258)
33 PRK07806 short chain dehydroge 99.2 1.1E-10 2.3E-15 78.5 8.8 71 5-79 4-76 (248)
34 PRK07102 short chain dehydroge 99.2 3.7E-11 8E-16 80.6 6.6 70 7-78 1-70 (243)
35 PRK11908 NAD-dependent epimera 99.2 7.1E-11 1.5E-15 83.4 8.2 63 7-77 1-65 (347)
36 PRK05653 fabG 3-ketoacyl-(acyl 99.2 1E-10 2.2E-15 77.7 8.5 71 5-80 3-75 (246)
37 PRK06182 short chain dehydroge 99.2 8.6E-11 1.9E-15 80.3 8.3 65 6-79 2-66 (273)
38 PLN02695 GDP-D-mannose-3',5'-e 99.2 5.7E-11 1.2E-15 85.1 7.6 64 6-78 20-83 (370)
39 PRK06924 short chain dehydroge 99.2 1.1E-10 2.4E-15 78.5 8.5 73 8-85 2-74 (251)
40 PRK07890 short chain dehydroge 99.2 9.5E-11 2.1E-15 79.0 8.2 71 6-81 4-76 (258)
41 TIGR03589 PseB UDP-N-acetylglu 99.2 8.9E-11 1.9E-15 82.6 8.3 68 6-78 3-72 (324)
42 PRK06194 hypothetical protein; 99.2 9.1E-11 2E-15 80.5 8.2 70 5-79 4-75 (287)
43 TIGR03325 BphB_TodD cis-2,3-di 99.2 1.4E-10 3E-15 78.8 8.9 76 5-86 3-78 (262)
44 PRK06463 fabG 3-ketoacyl-(acyl 99.2 1.4E-10 3.1E-15 78.4 9.0 78 1-86 1-78 (255)
45 PLN02240 UDP-glucose 4-epimera 99.2 1E-10 2.2E-15 82.3 8.5 72 5-78 3-77 (352)
46 PRK06179 short chain dehydroge 99.2 1.1E-10 2.4E-15 79.4 8.3 65 6-81 3-67 (270)
47 PRK12829 short chain dehydroge 99.2 1.2E-10 2.6E-15 78.6 8.4 73 3-80 7-79 (264)
48 PRK08628 short chain dehydroge 99.2 1.7E-10 3.7E-15 77.9 9.1 74 1-80 1-76 (258)
49 PRK06482 short chain dehydroge 99.2 1.5E-10 3.3E-15 79.1 8.9 66 8-79 3-68 (276)
50 COG0702 Predicted nucleoside-d 99.2 4.6E-11 1E-15 80.8 6.3 61 8-78 1-61 (275)
51 PF05368 NmrA: NmrA-like famil 99.2 8.4E-11 1.8E-15 78.9 7.4 63 10-79 1-63 (233)
52 PRK10217 dTDP-glucose 4,6-dehy 99.2 1E-10 2.2E-15 82.5 8.1 70 7-79 1-71 (355)
53 PRK06079 enoyl-(acyl carrier p 99.2 1.7E-10 3.7E-15 78.3 8.9 74 1-80 1-76 (252)
54 PLN02206 UDP-glucuronate decar 99.2 8.3E-11 1.8E-15 86.4 7.8 62 6-71 118-179 (442)
55 PRK08265 short chain dehydroge 99.2 2.5E-10 5.4E-15 77.7 9.4 73 5-83 4-76 (261)
56 PRK07231 fabG 3-ketoacyl-(acyl 99.2 1.1E-10 2.4E-15 78.2 7.5 70 6-80 4-74 (251)
57 PF01073 3Beta_HSD: 3-beta hyd 99.2 4.5E-11 9.9E-16 83.2 5.8 61 11-78 1-64 (280)
58 PRK08416 7-alpha-hydroxysteroi 99.2 9.5E-11 2.1E-15 79.6 7.3 76 1-81 2-81 (260)
59 COG0451 WcaG Nucleoside-diphos 99.2 7.7E-11 1.7E-15 81.1 6.8 60 8-77 1-60 (314)
60 PRK07326 short chain dehydroge 99.2 1.8E-10 3.8E-15 76.8 8.3 70 6-80 5-75 (237)
61 PRK06523 short chain dehydroge 99.2 1.8E-10 3.9E-15 77.9 8.4 66 2-79 4-69 (260)
62 PRK10538 malonic semialdehyde 99.2 2.1E-10 4.6E-15 77.4 8.7 66 8-79 1-66 (248)
63 PRK07063 short chain dehydroge 99.2 2.4E-10 5.3E-15 77.4 8.9 75 1-80 1-79 (260)
64 PRK07666 fabG 3-ketoacyl-(acyl 99.2 1.7E-10 3.8E-15 77.1 7.9 74 1-79 1-76 (239)
65 PRK05717 oxidoreductase; Valid 99.2 3.2E-10 6.9E-15 76.7 9.2 68 7-80 10-77 (255)
66 PF01370 Epimerase: NAD depend 99.2 2.8E-10 6E-15 75.5 8.7 62 10-79 1-62 (236)
67 PRK06500 short chain dehydroge 99.2 3.2E-10 7E-15 75.9 9.1 68 4-78 3-71 (249)
68 PRK05875 short chain dehydroge 99.2 3.1E-10 6.7E-15 77.4 9.0 73 3-80 3-79 (276)
69 PRK08263 short chain dehydroge 99.2 3.4E-10 7.5E-15 77.4 9.0 69 6-80 2-70 (275)
70 PLN02166 dTDP-glucose 4,6-dehy 99.1 1.9E-10 4.1E-15 84.4 8.0 36 6-41 119-154 (436)
71 PRK08267 short chain dehydroge 99.1 2.6E-10 5.6E-15 77.2 8.1 66 7-78 1-67 (260)
72 PRK08125 bifunctional UDP-gluc 99.1 1.6E-10 3.4E-15 88.3 7.5 63 7-77 315-379 (660)
73 PRK06914 short chain dehydroge 99.1 2.2E-10 4.8E-15 78.3 7.6 72 6-80 2-74 (280)
74 PRK07062 short chain dehydroge 99.1 2.3E-10 4.9E-15 77.7 7.4 72 4-80 5-80 (265)
75 PRK12939 short chain dehydroge 99.1 3.6E-10 7.7E-15 75.6 8.3 74 1-79 1-76 (250)
76 PRK07814 short chain dehydroge 99.1 2.3E-10 5.1E-15 77.8 7.5 71 5-80 8-80 (263)
77 PRK08642 fabG 3-ketoacyl-(acyl 99.1 5.6E-10 1.2E-14 74.9 9.1 74 7-86 5-79 (253)
78 PRK06200 2,3-dihydroxy-2,3-dih 99.1 5.4E-10 1.2E-14 75.9 9.1 72 4-81 3-74 (263)
79 PRK12745 3-ketoacyl-(acyl-carr 99.1 4.4E-10 9.6E-15 75.6 8.6 71 7-81 2-74 (256)
80 PLN02253 xanthoxin dehydrogena 99.1 4.7E-10 1E-14 76.8 8.8 71 5-80 16-87 (280)
81 PRK07067 sorbitol dehydrogenas 99.1 5.6E-10 1.2E-14 75.5 9.0 70 5-80 4-73 (257)
82 PRK12936 3-ketoacyl-(acyl-carr 99.1 6.9E-10 1.5E-14 74.0 9.3 70 4-79 3-72 (245)
83 PRK06172 short chain dehydroge 99.1 4.1E-10 8.9E-15 75.9 8.2 76 1-81 1-78 (253)
84 PRK05557 fabG 3-ketoacyl-(acyl 99.1 4.1E-10 8.9E-15 74.9 8.1 69 6-78 4-74 (248)
85 PRK05876 short chain dehydroge 99.1 5E-10 1.1E-14 77.1 8.7 72 5-81 4-77 (275)
86 PRK07024 short chain dehydroge 99.1 4E-10 8.7E-15 76.4 8.0 67 7-79 2-70 (257)
87 PRK07523 gluconate 5-dehydroge 99.1 5.3E-10 1.1E-14 75.5 8.6 71 5-80 8-80 (255)
88 PRK08219 short chain dehydroge 99.1 3.1E-10 6.7E-15 75.0 7.3 64 7-78 3-66 (227)
89 PLN00141 Tic62-NAD(P)-related 99.1 4.8E-10 1.1E-14 76.1 8.3 65 6-77 16-81 (251)
90 PRK06197 short chain dehydroge 99.1 1.8E-10 3.9E-15 80.1 6.3 69 6-79 15-87 (306)
91 PRK05993 short chain dehydroge 99.1 5.6E-10 1.2E-14 76.7 8.6 64 7-79 4-67 (277)
92 PRK09186 flagellin modificatio 99.1 3.4E-10 7.4E-15 76.2 7.4 69 6-79 3-75 (256)
93 TIGR01963 PHB_DH 3-hydroxybuty 99.1 3E-10 6.5E-15 76.2 7.1 66 8-78 2-69 (255)
94 PRK08213 gluconate 5-dehydroge 99.1 3.8E-10 8.1E-15 76.4 7.6 71 5-80 10-82 (259)
95 PRK07774 short chain dehydroge 99.1 4.4E-10 9.6E-15 75.4 7.8 72 5-81 4-77 (250)
96 PRK07074 short chain dehydroge 99.1 7.1E-10 1.5E-14 74.9 8.8 68 8-80 3-70 (257)
97 PRK06398 aldose dehydrogenase; 99.1 7.8E-10 1.7E-14 75.2 8.9 63 4-80 3-65 (258)
98 PRK07576 short chain dehydroge 99.1 4.9E-10 1.1E-14 76.5 7.9 76 1-81 1-80 (264)
99 PRK08226 short chain dehydroge 99.1 9.4E-10 2E-14 74.5 9.0 71 4-80 3-75 (263)
100 PRK06101 short chain dehydroge 99.1 6.6E-10 1.4E-14 74.7 8.1 65 8-79 2-66 (240)
101 PRK07454 short chain dehydroge 99.1 5.1E-10 1.1E-14 74.9 7.5 69 6-79 5-75 (241)
102 TIGR01832 kduD 2-deoxy-D-gluco 99.1 9.6E-10 2.1E-14 73.8 8.8 70 5-79 3-72 (248)
103 PRK07985 oxidoreductase; Provi 99.1 8E-10 1.7E-14 76.8 8.7 73 5-81 47-122 (294)
104 PRK10084 dTDP-glucose 4,6 dehy 99.1 6.2E-10 1.3E-14 78.5 8.2 68 8-79 1-70 (352)
105 PRK06057 short chain dehydroge 99.1 9.4E-10 2E-14 74.4 8.8 71 2-80 2-72 (255)
106 PRK06138 short chain dehydroge 99.1 4.8E-10 1E-14 75.2 7.2 69 6-79 4-73 (252)
107 PRK05693 short chain dehydroge 99.1 6.7E-10 1.5E-14 75.9 8.0 63 7-78 1-63 (274)
108 PRK12481 2-deoxy-D-gluconate 3 99.1 8.5E-10 1.8E-14 74.8 8.5 77 5-86 6-82 (251)
109 TIGR03206 benzo_BadH 2-hydroxy 99.1 5.9E-10 1.3E-14 74.7 7.6 68 6-78 2-71 (250)
110 PRK07453 protochlorophyllide o 99.1 5.6E-10 1.2E-14 78.2 7.6 70 5-79 4-75 (322)
111 PLN02260 probable rhamnose bio 99.1 6.6E-10 1.4E-14 84.7 8.5 70 5-78 4-76 (668)
112 PRK06935 2-deoxy-D-gluconate 3 99.1 1.1E-09 2.4E-14 74.2 8.7 72 5-81 13-85 (258)
113 PRK06196 oxidoreductase; Provi 99.1 8.1E-10 1.7E-14 77.2 8.2 67 5-79 24-91 (315)
114 TIGR01181 dTDP_gluc_dehyt dTDP 99.1 5.5E-10 1.2E-14 76.8 7.2 66 9-78 1-69 (317)
115 PRK06128 oxidoreductase; Provi 99.1 9.5E-10 2.1E-14 76.4 8.3 80 4-86 52-133 (300)
116 PRK05565 fabG 3-ketoacyl-(acyl 99.1 9E-10 1.9E-14 73.5 7.9 71 5-80 3-76 (247)
117 PRK06841 short chain dehydroge 99.1 1.7E-09 3.8E-14 72.8 9.3 68 6-79 14-81 (255)
118 COG2910 Putative NADH-flavin r 99.1 3.4E-10 7.3E-15 75.1 5.6 60 8-78 1-60 (211)
119 PRK12827 short chain dehydroge 99.1 1.7E-09 3.7E-14 72.2 9.1 72 6-79 5-79 (249)
120 PRK08264 short chain dehydroge 99.1 1E-09 2.2E-14 73.3 7.9 65 5-79 4-69 (238)
121 PRK07775 short chain dehydroge 99.1 8.8E-10 1.9E-14 75.6 7.7 73 4-81 7-81 (274)
122 PRK07825 short chain dehydroge 99.1 1.4E-09 3E-14 74.2 8.7 68 5-80 3-71 (273)
123 PRK09291 short chain dehydroge 99.1 6.6E-10 1.4E-14 74.8 7.0 66 7-78 2-70 (257)
124 PRK07478 short chain dehydroge 99.1 9.2E-10 2E-14 74.3 7.6 70 6-80 5-76 (254)
125 PRK06701 short chain dehydroge 99.1 1.6E-09 3.4E-14 75.3 8.9 74 4-81 43-118 (290)
126 COG1088 RfbB dTDP-D-glucose 4, 99.1 9.6E-10 2.1E-14 77.5 7.8 68 8-79 1-71 (340)
127 PRK08251 short chain dehydroge 99.1 6.3E-10 1.4E-14 74.7 6.8 72 7-80 2-74 (248)
128 PRK07023 short chain dehydroge 99.1 1E-09 2.2E-14 73.7 7.7 64 7-78 1-64 (243)
129 PRK08936 glucose-1-dehydrogena 99.1 1.4E-09 3E-14 73.8 8.4 76 1-80 1-78 (261)
130 PRK12744 short chain dehydroge 99.1 2.6E-09 5.5E-14 72.3 9.6 73 6-80 7-82 (257)
131 PRK12320 hypothetical protein; 99.0 6.6E-10 1.4E-14 85.6 7.4 56 8-76 1-56 (699)
132 PRK08220 2,3-dihydroxybenzoate 99.0 2E-09 4.2E-14 72.3 8.9 64 5-80 6-69 (252)
133 PRK08643 acetoin reductase; Va 99.0 1.2E-09 2.6E-14 73.7 7.9 69 7-80 2-72 (256)
134 PRK09987 dTDP-4-dehydrorhamnos 99.0 3.8E-10 8.2E-15 78.6 5.5 33 8-41 1-33 (299)
135 PRK08063 enoyl-(acyl carrier p 99.0 9.3E-10 2E-14 73.8 7.2 70 6-80 3-75 (250)
136 PRK12746 short chain dehydroge 99.0 1.5E-09 3.2E-14 73.1 8.2 72 5-81 4-78 (254)
137 PRK06949 short chain dehydroge 99.0 1.2E-09 2.6E-14 73.6 7.7 70 5-80 7-79 (258)
138 PRK05867 short chain dehydroge 99.0 1.3E-09 2.8E-14 73.6 7.8 72 5-81 7-80 (253)
139 PRK07856 short chain dehydroge 99.0 1.3E-09 2.9E-14 73.5 7.8 65 5-80 4-68 (252)
140 PRK09134 short chain dehydroge 99.0 1.6E-09 3.6E-14 73.3 8.3 71 7-81 9-81 (258)
141 PRK08589 short chain dehydroge 99.0 1.7E-09 3.7E-14 74.1 8.4 77 4-86 3-81 (272)
142 PRK06124 gluconate 5-dehydroge 99.0 2.1E-09 4.5E-14 72.6 8.7 72 5-81 9-82 (256)
143 PRK09072 short chain dehydroge 99.0 2E-09 4.3E-14 73.1 8.6 68 6-78 4-72 (263)
144 PRK06139 short chain dehydroge 99.0 1.2E-09 2.6E-14 77.5 7.8 73 1-79 1-76 (330)
145 PRK08017 oxidoreductase; Provi 99.0 9E-10 1.9E-14 74.1 6.8 62 8-78 3-64 (256)
146 PRK06483 dihydromonapterin red 99.0 1.9E-09 4.2E-14 72.0 8.3 67 7-81 2-68 (236)
147 PRK07109 short chain dehydroge 99.0 1.6E-09 3.4E-14 76.8 8.2 73 3-80 4-78 (334)
148 PRK07677 short chain dehydroge 99.0 1.4E-09 3E-14 73.5 7.5 69 8-81 2-72 (252)
149 PRK05866 short chain dehydroge 99.0 1.6E-09 3.4E-14 75.4 8.0 69 5-79 38-109 (293)
150 PRK06505 enoyl-(acyl carrier p 99.0 2E-09 4.4E-14 74.0 8.4 80 1-86 1-84 (271)
151 PRK05786 fabG 3-ketoacyl-(acyl 99.0 2.5E-09 5.4E-14 71.3 8.6 69 6-80 4-74 (238)
152 PRK06114 short chain dehydroge 99.0 2.8E-09 6E-14 72.1 8.9 72 5-80 6-79 (254)
153 PRK12384 sorbitol-6-phosphate 99.0 1.8E-09 3.8E-14 73.0 7.8 72 7-80 2-74 (259)
154 PRK08177 short chain dehydroge 99.0 1.9E-09 4E-14 71.8 7.7 64 7-78 1-64 (225)
155 PRK07035 short chain dehydroge 99.0 1.8E-09 3.9E-14 72.7 7.7 74 5-83 6-81 (252)
156 PRK06077 fabG 3-ketoacyl-(acyl 99.0 2.6E-09 5.6E-14 71.7 8.3 71 6-80 5-77 (252)
157 PRK05854 short chain dehydroge 99.0 1.3E-09 2.8E-14 76.4 7.2 73 5-79 12-85 (313)
158 PRK08339 short chain dehydroge 99.0 1.4E-09 3.1E-14 74.3 7.2 70 5-79 6-78 (263)
159 PLN03209 translocon at the inn 99.0 1.8E-09 3.9E-14 81.6 8.2 67 6-78 79-157 (576)
160 PRK08085 gluconate 5-dehydroge 99.0 2.8E-09 6.1E-14 71.9 8.5 70 6-80 8-79 (254)
161 PRK08278 short chain dehydroge 99.0 3.7E-09 8.1E-14 72.5 9.2 77 5-81 4-84 (273)
162 PRK06953 short chain dehydroge 99.0 1.1E-09 2.5E-14 72.7 6.4 63 7-78 1-63 (222)
163 PRK06171 sorbitol-6-phosphate 99.0 2.7E-09 5.9E-14 72.4 8.4 64 5-80 7-70 (266)
164 PRK07904 short chain dehydroge 99.0 2.9E-09 6.4E-14 72.5 8.4 72 6-78 7-79 (253)
165 COG0300 DltE Short-chain dehyd 99.0 1.1E-09 2.5E-14 76.0 6.4 70 3-78 2-75 (265)
166 PLN00016 RNA-binding protein; 99.0 7.3E-10 1.6E-14 79.4 5.6 65 6-70 51-121 (378)
167 PRK07097 gluconate 5-dehydroge 99.0 2.7E-09 5.9E-14 72.6 8.1 72 5-81 8-81 (265)
168 PRK12935 acetoacetyl-CoA reduc 99.0 2.9E-09 6.3E-14 71.4 8.1 74 5-82 4-79 (247)
169 PRK06181 short chain dehydroge 99.0 2.2E-09 4.7E-14 72.7 7.4 68 8-80 2-71 (263)
170 PRK12743 oxidoreductase; Provi 99.0 3.1E-09 6.7E-14 72.0 8.2 70 7-81 2-74 (256)
171 PRK12937 short chain dehydroge 99.0 2.7E-09 5.7E-14 71.3 7.6 71 6-80 4-76 (245)
172 PRK07060 short chain dehydroge 99.0 4.4E-09 9.5E-14 70.3 8.5 66 5-78 7-72 (245)
173 PRK07201 short chain dehydroge 99.0 1.5E-09 3.3E-14 81.9 7.0 60 8-71 1-63 (657)
174 PRK08340 glucose-1-dehydrogena 99.0 3.4E-09 7.4E-14 71.9 8.0 69 8-81 1-70 (259)
175 KOG1429 dTDP-glucose 4-6-dehyd 99.0 1.8E-09 3.8E-14 75.9 6.6 62 6-71 26-87 (350)
176 PRK06113 7-alpha-hydroxysteroi 99.0 3.8E-09 8.2E-14 71.4 8.0 71 5-80 9-81 (255)
177 PRK06947 glucose-1-dehydrogena 99.0 3.8E-09 8.3E-14 70.8 8.0 69 7-80 2-73 (248)
178 PRK06198 short chain dehydroge 99.0 3.5E-09 7.5E-14 71.5 7.8 71 4-79 3-76 (260)
179 TIGR02415 23BDH acetoin reduct 99.0 4E-09 8.7E-14 70.9 7.9 68 8-80 1-70 (254)
180 PRK08945 putative oxoacyl-(acy 99.0 2.8E-09 6E-14 71.7 7.1 68 6-78 11-83 (247)
181 TIGR01179 galE UDP-glucose-4-e 99.0 3.1E-09 6.8E-14 73.3 7.4 65 9-78 1-66 (328)
182 PRK08303 short chain dehydroge 99.0 6E-09 1.3E-13 73.1 8.8 81 1-81 2-89 (305)
183 PRK08594 enoyl-(acyl carrier p 99.0 7.1E-09 1.5E-13 70.7 8.9 77 1-80 1-80 (257)
184 PRK05865 hypothetical protein; 99.0 2.9E-09 6.4E-14 83.5 7.8 59 8-78 1-59 (854)
185 PRK08277 D-mannonate oxidoredu 99.0 3.4E-09 7.4E-14 72.4 7.3 70 5-79 8-79 (278)
186 PRK09242 tropinone reductase; 99.0 5.1E-09 1.1E-13 70.8 8.1 77 5-86 7-87 (257)
187 PRK07832 short chain dehydroge 99.0 2.7E-09 5.8E-14 72.9 6.8 68 8-80 1-71 (272)
188 PRK09730 putative NAD(P)-bindi 99.0 3.7E-09 8E-14 70.6 7.3 66 8-79 2-71 (247)
189 PRK07889 enoyl-(acyl carrier p 98.9 7.7E-09 1.7E-13 70.4 8.7 75 1-80 1-78 (256)
190 PRK07201 short chain dehydroge 98.9 3.6E-09 7.8E-14 80.0 7.7 79 3-86 367-447 (657)
191 PRK07577 short chain dehydroge 98.9 6.1E-09 1.3E-13 69.2 8.0 59 6-78 2-60 (234)
192 PRK07792 fabG 3-ketoacyl-(acyl 98.9 7.7E-09 1.7E-13 72.3 8.8 75 1-79 6-82 (306)
193 PRK12824 acetoacetyl-CoA reduc 98.9 6.1E-09 1.3E-13 69.4 7.8 68 8-79 3-72 (245)
194 PRK12938 acetyacetyl-CoA reduc 98.9 9.7E-09 2.1E-13 68.8 8.7 70 6-79 2-73 (246)
195 PRK05650 short chain dehydroge 98.9 6.3E-09 1.4E-13 70.9 7.6 66 8-78 1-68 (270)
196 PRK05884 short chain dehydroge 98.9 6.8E-09 1.5E-13 69.5 7.5 63 8-78 1-63 (223)
197 COG1089 Gmd GDP-D-mannose dehy 98.9 4.7E-09 1E-13 73.7 6.7 72 7-79 2-75 (345)
198 TIGR01829 AcAcCoA_reduct aceto 98.9 1E-08 2.2E-13 68.3 7.7 68 8-79 1-70 (242)
199 PRK12742 oxidoreductase; Provi 98.9 1.2E-08 2.7E-13 67.9 8.1 68 5-79 4-71 (237)
200 PRK08309 short chain dehydroge 98.9 1.2E-08 2.5E-13 67.1 7.8 67 8-81 1-69 (177)
201 PRK06123 short chain dehydroge 98.9 1.1E-08 2.5E-13 68.4 7.9 68 8-80 3-73 (248)
202 PRK08993 2-deoxy-D-gluconate 3 98.9 1.6E-08 3.4E-13 68.5 8.7 71 5-80 8-78 (253)
203 TIGR01830 3oxo_ACP_reduc 3-oxo 98.9 1.1E-08 2.5E-13 67.8 7.8 66 10-79 1-68 (239)
204 PRK05855 short chain dehydroge 98.9 8.5E-09 1.8E-13 76.2 7.8 71 5-80 313-385 (582)
205 PRK06125 short chain dehydroge 98.9 1E-08 2.2E-13 69.5 7.4 70 5-79 5-77 (259)
206 PRK05872 short chain dehydroge 98.9 2.4E-08 5.2E-13 69.4 9.2 71 5-81 7-79 (296)
207 TIGR01746 Thioester-redct thio 98.9 4.6E-09 9.9E-14 73.3 5.6 63 9-71 1-73 (367)
208 KOG1205 Predicted dehydrogenas 98.9 1.2E-08 2.7E-13 71.4 7.7 79 5-86 10-90 (282)
209 PF07993 NAD_binding_4: Male s 98.9 4.2E-09 9E-14 71.7 5.2 58 12-72 1-73 (249)
210 PRK07791 short chain dehydroge 98.9 2.3E-08 4.9E-13 69.3 8.6 83 4-86 3-91 (286)
211 TIGR01831 fabG_rel 3-oxoacyl-( 98.9 1.2E-08 2.6E-13 68.1 7.0 66 10-79 1-68 (239)
212 PRK08217 fabG 3-ketoacyl-(acyl 98.8 1.8E-08 3.9E-13 67.4 7.8 69 5-78 3-73 (253)
213 PRK07424 bifunctional sterol d 98.8 2.3E-08 4.9E-13 73.1 8.8 68 5-78 176-243 (406)
214 PRK12748 3-ketoacyl-(acyl-carr 98.8 2.2E-08 4.8E-13 67.7 8.2 82 5-86 3-94 (256)
215 PRK12367 short chain dehydroge 98.8 1.6E-08 3.4E-13 69.0 7.3 67 4-78 11-77 (245)
216 PRK07831 short chain dehydroge 98.8 1.5E-08 3.3E-13 68.7 7.2 71 5-80 15-90 (262)
217 TIGR02685 pter_reduc_Leis pter 98.8 1.4E-08 3E-13 69.2 7.0 65 8-77 2-70 (267)
218 KOG1430 C-3 sterol dehydrogena 98.8 1.4E-08 3E-13 73.2 7.2 71 6-79 3-75 (361)
219 PRK08703 short chain dehydroge 98.8 2.1E-08 4.5E-13 67.1 7.4 68 5-77 4-76 (239)
220 PRK06484 short chain dehydroge 98.8 3.1E-08 6.7E-13 73.2 8.9 75 6-86 268-342 (520)
221 PRK08862 short chain dehydroge 98.8 2.5E-08 5.4E-13 67.2 7.7 77 5-86 3-81 (227)
222 TIGR02632 RhaD_aldol-ADH rhamn 98.8 1.5E-08 3.2E-13 77.9 7.3 76 5-85 412-491 (676)
223 PRK07069 short chain dehydroge 98.8 1.8E-08 4E-13 67.5 6.9 67 9-80 1-72 (251)
224 PRK07984 enoyl-(acyl carrier p 98.8 3.5E-08 7.6E-13 67.7 8.5 80 3-86 2-83 (262)
225 PRK06603 enoyl-(acyl carrier p 98.8 4.5E-08 9.7E-13 66.8 8.6 79 2-86 3-85 (260)
226 PRK07041 short chain dehydroge 98.8 2.1E-08 4.6E-13 66.6 6.5 64 11-79 1-65 (230)
227 TIGR01214 rmlD dTDP-4-dehydror 98.8 1.4E-08 3E-13 69.6 5.6 33 9-41 1-33 (287)
228 PRK05599 hypothetical protein; 98.8 2.8E-08 6.1E-13 67.2 6.9 67 8-80 1-70 (246)
229 COG1090 Predicted nucleoside-d 98.8 3.3E-09 7.3E-14 74.0 2.3 34 10-43 1-34 (297)
230 PLN02778 3,5-epimerase/4-reduc 98.8 1.5E-08 3.3E-13 70.8 5.6 33 7-39 9-41 (298)
231 PRK12747 short chain dehydroge 98.8 4.4E-08 9.6E-13 66.0 7.5 69 6-78 3-73 (252)
232 TIGR01289 LPOR light-dependent 98.8 4E-08 8.8E-13 68.9 7.3 69 7-80 3-74 (314)
233 PRK06484 short chain dehydroge 98.8 7.5E-08 1.6E-12 71.2 9.1 70 5-80 3-72 (520)
234 PRK08324 short chain dehydroge 98.8 6.8E-08 1.5E-12 74.2 9.0 70 6-81 421-492 (681)
235 PRK09009 C factor cell-cell si 98.8 4.4E-08 9.5E-13 65.3 7.1 59 8-77 1-61 (235)
236 PRK12859 3-ketoacyl-(acyl-carr 98.7 1E-07 2.3E-12 64.6 9.0 84 3-86 2-95 (256)
237 PLN02503 fatty acyl-CoA reduct 98.7 5.8E-08 1.3E-12 74.0 8.1 38 6-43 118-158 (605)
238 PRK06720 hypothetical protein; 98.7 1.2E-07 2.5E-12 61.8 8.4 69 5-78 14-84 (169)
239 TIGR01777 yfcH conserved hypot 98.7 1.6E-08 3.5E-13 69.0 4.2 34 10-43 1-34 (292)
240 PRK07533 enoyl-(acyl carrier p 98.7 1E-07 2.3E-12 64.8 8.2 78 4-86 7-87 (258)
241 PF00106 adh_short: short chai 98.7 7.8E-08 1.7E-12 60.9 7.1 70 8-80 1-73 (167)
242 PRK06550 fabG 3-ketoacyl-(acyl 98.7 6.7E-08 1.5E-12 64.3 7.0 54 6-71 4-57 (235)
243 PRK08690 enoyl-(acyl carrier p 98.7 1.3E-07 2.7E-12 64.6 8.3 77 4-86 3-83 (261)
244 COG4221 Short-chain alcohol de 98.7 1.6E-07 3.4E-12 64.6 8.7 67 7-79 6-73 (246)
245 TIGR01500 sepiapter_red sepiap 98.7 6.1E-08 1.3E-12 65.7 6.7 67 9-80 2-76 (256)
246 PRK07370 enoyl-(acyl carrier p 98.7 1.5E-07 3.2E-12 64.2 8.6 79 5-86 4-86 (258)
247 PLN02996 fatty acyl-CoA reduct 98.7 9.9E-08 2.1E-12 71.1 8.1 38 6-43 10-50 (491)
248 smart00822 PKS_KR This enzymat 98.7 2.6E-07 5.6E-12 58.0 8.8 69 8-78 1-72 (180)
249 PRK08159 enoyl-(acyl carrier p 98.7 1.1E-07 2.3E-12 65.5 7.6 74 2-80 5-81 (272)
250 PRK08415 enoyl-(acyl carrier p 98.7 1.2E-07 2.6E-12 65.5 7.7 76 6-86 4-82 (274)
251 PLN02780 ketoreductase/ oxidor 98.7 6.6E-08 1.4E-12 68.3 6.1 58 7-70 53-115 (320)
252 TIGR02197 heptose_epim ADP-L-g 98.6 7.1E-08 1.5E-12 66.6 5.8 32 10-41 1-33 (314)
253 PRK11150 rfaD ADP-L-glycero-D- 98.6 5.1E-08 1.1E-12 67.6 4.9 32 10-41 2-33 (308)
254 PRK06997 enoyl-(acyl carrier p 98.6 1.9E-07 4.2E-12 63.7 7.3 79 3-86 2-83 (260)
255 COG1028 FabG Dehydrogenases wi 98.6 5.4E-07 1.2E-11 60.5 9.2 79 4-86 2-85 (251)
256 COG3320 Putative dehydrogenase 98.6 9.8E-08 2.1E-12 69.0 5.8 62 8-71 1-72 (382)
257 PRK06940 short chain dehydroge 98.6 2.8E-07 6.1E-12 63.4 7.9 66 7-79 2-69 (275)
258 PRK08261 fabG 3-ketoacyl-(acyl 98.6 4.1E-07 8.9E-12 66.4 9.0 68 6-79 209-276 (450)
259 KOG1208 Dehydrogenases with di 98.6 1.5E-07 3.3E-12 66.8 6.5 75 5-80 33-107 (314)
260 KOG1372 GDP-mannose 4,6 dehydr 98.6 2.6E-07 5.6E-12 64.4 7.1 69 9-78 30-102 (376)
261 PF08659 KR: KR domain; Inter 98.6 4.7E-07 1E-11 59.1 7.9 71 9-81 2-75 (181)
262 PF04321 RmlD_sub_bind: RmlD s 98.5 3.3E-07 7.1E-12 63.9 7.0 34 8-41 1-34 (286)
263 PF02719 Polysacc_synt_2: Poly 98.5 1.8E-07 3.8E-12 65.9 5.2 65 10-79 1-74 (293)
264 COG1748 LYS9 Saccharopine dehy 98.5 5.9E-07 1.3E-11 65.5 7.6 67 7-80 1-68 (389)
265 PLN02725 GDP-4-keto-6-deoxyman 98.5 1.3E-07 2.8E-12 65.1 3.9 30 11-40 1-30 (306)
266 PRK07578 short chain dehydroge 98.5 5.3E-07 1.1E-11 58.9 6.7 33 8-41 1-33 (199)
267 PLN00015 protochlorophyllide r 98.5 3.3E-07 7.1E-12 64.1 5.7 64 11-79 1-67 (308)
268 COG1086 Predicted nucleoside-d 98.4 7E-07 1.5E-11 67.4 6.4 71 6-78 249-321 (588)
269 COG3967 DltE Short-chain dehyd 98.4 1.3E-06 2.9E-11 59.1 6.8 68 4-78 2-69 (245)
270 TIGR00715 precor6x_red precorr 98.4 1.6E-06 3.4E-11 60.1 6.9 35 8-43 1-35 (256)
271 KOG1611 Predicted short chain- 98.4 2.9E-06 6.3E-11 58.0 7.6 78 5-87 1-82 (249)
272 KOG1209 1-Acyl dihydroxyaceton 98.3 3.1E-06 6.7E-11 57.9 6.9 68 1-77 1-70 (289)
273 PLN02260 probable rhamnose bio 98.3 8.8E-07 1.9E-11 67.7 4.8 31 5-35 378-408 (668)
274 TIGR03443 alpha_am_amid L-amin 98.3 2.5E-06 5.3E-11 69.4 6.5 62 7-71 971-1046(1389)
275 cd01078 NAD_bind_H4MPT_DH NADP 98.2 1E-05 2.2E-10 53.2 8.2 68 5-78 26-95 (194)
276 KOG4169 15-hydroxyprostaglandi 98.2 4.5E-06 9.7E-11 57.3 6.5 79 6-86 4-82 (261)
277 PRK09620 hypothetical protein; 98.2 3.9E-06 8.5E-11 57.2 5.6 36 6-41 2-53 (229)
278 COG0569 TrkA K+ transport syst 98.2 9E-06 2E-10 55.2 7.2 65 8-80 1-65 (225)
279 KOG1201 Hydroxysteroid 17-beta 98.2 1.5E-05 3.3E-10 56.2 8.5 69 6-78 37-105 (300)
280 KOG0725 Reductases with broad 98.2 9.1E-06 2E-10 56.6 7.0 77 3-81 4-82 (270)
281 KOG2865 NADH:ubiquinone oxidor 98.1 7.4E-06 1.6E-10 58.2 5.9 65 9-78 63-128 (391)
282 PF02254 TrkA_N: TrkA-N domain 98.1 1E-05 2.2E-10 48.9 5.8 61 10-80 1-61 (116)
283 KOG1014 17 beta-hydroxysteroid 98.1 6.1E-06 1.3E-10 58.5 5.5 65 8-78 50-118 (312)
284 KOG1221 Acyl-CoA reductase [Li 98.1 1E-05 2.2E-10 60.2 6.4 67 6-72 11-92 (467)
285 KOG1207 Diacetyl reductase/L-x 98.1 2E-05 4.4E-10 52.6 7.1 72 1-78 1-72 (245)
286 PRK09496 trkA potassium transp 98.1 1.8E-05 3.8E-10 57.8 7.2 61 8-77 1-61 (453)
287 KOG1203 Predicted dehydrogenas 98.0 1.7E-05 3.7E-10 58.2 6.6 38 5-42 77-114 (411)
288 COG1091 RfbD dTDP-4-dehydrorha 98.0 1.3E-05 2.8E-10 56.3 5.0 34 8-42 1-34 (281)
289 PF03435 Saccharop_dh: Sacchar 98.0 4.6E-05 9.9E-10 54.9 7.6 62 10-78 1-65 (386)
290 KOG1200 Mitochondrial/plastidi 98.0 3.3E-05 7.1E-10 52.3 6.2 76 6-86 13-89 (256)
291 PRK05579 bifunctional phosphop 97.9 6E-05 1.3E-09 55.2 7.2 61 5-79 186-262 (399)
292 PRK06732 phosphopantothenate-- 97.9 2.3E-05 5E-10 53.3 4.7 27 15-41 24-50 (229)
293 PRK10669 putative cation:proto 97.9 3.7E-05 7.9E-10 58.1 6.1 63 8-80 418-480 (558)
294 PRK13656 trans-2-enoyl-CoA red 97.9 0.00015 3.2E-09 53.2 8.9 79 7-86 41-130 (398)
295 PRK14874 aspartate-semialdehyd 97.9 5.9E-05 1.3E-09 53.9 6.5 35 7-41 1-38 (334)
296 PRK09496 trkA potassium transp 97.8 0.00012 2.6E-09 53.5 7.7 65 6-78 230-294 (453)
297 KOG1610 Corticosteroid 11-beta 97.8 0.00022 4.7E-09 50.9 8.5 76 6-87 28-104 (322)
298 PRK03659 glutathione-regulated 97.8 6.3E-05 1.4E-09 57.5 6.2 64 7-80 400-463 (601)
299 PRK14982 acyl-ACP reductase; P 97.8 4.5E-05 9.8E-10 54.9 4.9 38 4-41 152-191 (340)
300 PRK03562 glutathione-regulated 97.8 9.5E-05 2.1E-09 56.8 6.9 62 7-78 400-461 (621)
301 PRK14106 murD UDP-N-acetylmura 97.8 9.6E-05 2.1E-09 54.1 6.6 61 5-70 3-63 (450)
302 PF13561 adh_short_C2: Enoyl-( 97.8 6.9E-05 1.5E-09 50.3 5.4 67 14-85 1-70 (241)
303 TIGR01915 npdG NADPH-dependent 97.8 5.9E-05 1.3E-09 50.7 5.1 34 8-41 1-34 (219)
304 KOG1210 Predicted 3-ketosphing 97.7 9.2E-05 2E-09 52.8 5.1 66 8-78 34-103 (331)
305 PLN02730 enoyl-[acyl-carrier-p 97.7 0.00039 8.5E-09 49.1 8.3 35 5-40 7-43 (303)
306 KOG0747 Putative NAD+-dependen 97.7 0.00011 2.3E-09 52.1 5.2 68 8-79 7-77 (331)
307 PLN02968 Probable N-acetyl-gam 97.6 9.3E-05 2E-09 53.9 4.5 36 6-41 37-73 (381)
308 PRK08664 aspartate-semialdehyd 97.6 0.00017 3.7E-09 51.7 5.1 37 5-41 1-38 (349)
309 KOG1478 3-keto sterol reductas 97.5 0.00036 7.8E-09 49.0 6.2 71 6-78 2-80 (341)
310 cd01336 MDH_cytoplasmic_cytoso 97.5 0.00025 5.4E-09 50.6 5.1 35 7-41 2-43 (325)
311 PRK12548 shikimate 5-dehydroge 97.5 0.00041 8.9E-09 48.6 5.9 68 6-77 125-196 (289)
312 PF01118 Semialdhyde_dh: Semia 97.4 0.00033 7.1E-09 43.0 4.6 33 9-41 1-35 (121)
313 PRK05671 aspartate-semialdehyd 97.4 0.00032 7E-09 50.4 4.9 31 6-36 3-33 (336)
314 TIGR02114 coaB_strep phosphopa 97.4 0.00037 8E-09 47.4 4.9 26 15-40 23-48 (227)
315 PRK04148 hypothetical protein; 97.4 0.00063 1.4E-08 43.1 5.5 55 7-72 17-71 (134)
316 TIGR02813 omega_3_PfaA polyket 97.3 0.0011 2.4E-08 57.8 8.1 34 7-40 1997-2031(2582)
317 PF00070 Pyr_redox: Pyridine n 97.3 0.00087 1.9E-08 38.1 5.2 34 9-43 1-34 (80)
318 PRK11199 tyrA bifunctional cho 97.3 0.00044 9.5E-09 50.2 4.7 35 7-41 98-132 (374)
319 PRK06129 3-hydroxyacyl-CoA deh 97.3 0.00055 1.2E-08 48.2 5.0 33 8-41 3-35 (308)
320 KOG2733 Uncharacterized membra 97.3 0.00028 6E-09 51.3 3.5 64 9-78 7-81 (423)
321 PRK10537 voltage-gated potassi 97.3 0.001 2.3E-08 48.7 6.5 62 7-80 240-301 (393)
322 PRK11064 wecC UDP-N-acetyl-D-m 97.3 0.00048 1E-08 50.6 4.8 36 5-41 1-36 (415)
323 KOG1431 GDP-L-fucose synthetas 97.3 0.00091 2E-08 46.4 5.6 26 7-32 1-26 (315)
324 PRK06249 2-dehydropantoate 2-r 97.2 0.0008 1.7E-08 47.4 5.3 36 5-41 3-38 (313)
325 PRK08655 prephenate dehydrogen 97.2 0.00067 1.5E-08 50.2 5.0 34 8-41 1-34 (437)
326 TIGR01296 asd_B aspartate-semi 97.2 0.00083 1.8E-08 48.2 5.3 28 9-36 1-28 (339)
327 KOG1199 Short-chain alcohol de 97.2 0.0025 5.5E-08 42.7 7.1 72 9-86 11-82 (260)
328 cd01075 NAD_bind_Leu_Phe_Val_D 97.2 0.0013 2.8E-08 43.9 5.7 37 4-41 25-61 (200)
329 PRK12409 D-amino acid dehydrog 97.2 0.0009 2E-08 48.3 5.2 33 8-41 2-34 (410)
330 KOG4039 Serine/threonine kinas 97.2 0.00095 2.1E-08 44.7 4.8 37 5-41 16-54 (238)
331 TIGR00521 coaBC_dfp phosphopan 97.1 0.0024 5.3E-08 46.8 7.2 37 5-41 183-235 (390)
332 PRK00436 argC N-acetyl-gamma-g 97.1 0.00098 2.1E-08 47.8 5.0 34 7-40 2-36 (343)
333 PRK08229 2-dehydropantoate 2-r 97.1 0.001 2.2E-08 47.1 5.0 33 7-40 2-34 (341)
334 PRK06849 hypothetical protein; 97.1 0.0013 2.7E-08 47.6 5.5 37 5-41 2-38 (389)
335 PF00056 Ldh_1_N: lactate/mala 97.1 0.0015 3.2E-08 41.4 5.2 34 8-41 1-36 (141)
336 PF03721 UDPG_MGDP_dh_N: UDP-g 97.1 0.00085 1.8E-08 44.3 4.1 33 8-41 1-33 (185)
337 PLN02383 aspartate semialdehyd 97.1 0.0011 2.4E-08 47.7 5.0 33 1-33 1-33 (344)
338 PRK05808 3-hydroxybutyryl-CoA 97.1 0.0015 3.2E-08 45.3 5.2 36 5-41 1-36 (282)
339 PF03446 NAD_binding_2: NAD bi 97.1 0.0014 3.1E-08 42.1 4.7 34 7-41 1-34 (163)
340 PRK14619 NAD(P)H-dependent gly 97.0 0.0017 3.7E-08 45.7 5.4 36 6-42 3-38 (308)
341 PRK06300 enoyl-(acyl carrier p 97.0 0.0018 4E-08 45.6 5.5 39 2-40 3-43 (299)
342 PRK06444 prephenate dehydrogen 97.0 0.0011 2.5E-08 44.3 4.2 29 8-36 1-29 (197)
343 PRK00094 gpsA NAD(P)H-dependen 97.0 0.0016 3.4E-08 45.6 5.1 33 8-41 2-34 (325)
344 PRK02472 murD UDP-N-acetylmura 97.0 0.0029 6.2E-08 46.3 6.5 35 6-41 4-38 (447)
345 PF01488 Shikimate_DH: Shikima 97.0 0.0027 5.8E-08 39.8 5.5 37 4-41 9-46 (135)
346 PRK00711 D-amino acid dehydrog 97.0 0.0018 3.8E-08 46.7 5.0 33 8-41 1-33 (416)
347 PRK06019 phosphoribosylaminoim 97.0 0.0055 1.2E-07 44.2 7.5 60 7-78 2-61 (372)
348 PRK07530 3-hydroxybutyryl-CoA 96.9 0.0024 5.1E-08 44.5 5.4 36 5-41 2-37 (292)
349 PRK06522 2-dehydropantoate 2-r 96.9 0.002 4.2E-08 44.7 4.9 33 8-41 1-33 (304)
350 cd05294 LDH-like_MDH_nadp A la 96.9 0.0021 4.7E-08 45.5 5.1 34 8-41 1-36 (309)
351 PRK06719 precorrin-2 dehydroge 96.9 0.0024 5.2E-08 41.2 4.9 34 5-39 11-44 (157)
352 PRK06035 3-hydroxyacyl-CoA deh 96.9 0.0025 5.3E-08 44.5 5.2 34 7-41 3-36 (291)
353 COG2085 Predicted dinucleotide 96.9 0.0019 4.2E-08 43.7 4.5 33 9-41 2-34 (211)
354 PRK06718 precorrin-2 dehydroge 96.9 0.0025 5.4E-08 42.7 4.9 35 5-40 8-42 (202)
355 PLN02545 3-hydroxybutyryl-CoA 96.9 0.0027 6E-08 44.3 5.3 35 6-41 3-37 (295)
356 PRK07066 3-hydroxybutyryl-CoA 96.9 0.0029 6.4E-08 45.2 5.5 37 4-41 4-40 (321)
357 PF02737 3HCDH_N: 3-hydroxyacy 96.9 0.0026 5.6E-08 41.8 4.7 32 9-41 1-32 (180)
358 PRK07236 hypothetical protein; 96.8 0.0034 7.5E-08 45.0 5.6 37 4-41 3-39 (386)
359 PLN00106 malate dehydrogenase 96.8 0.0037 8.1E-08 44.7 5.7 38 4-41 15-54 (323)
360 PRK05086 malate dehydrogenase; 96.8 0.0022 4.7E-08 45.6 4.5 34 8-41 1-37 (312)
361 PRK12921 2-dehydropantoate 2-r 96.8 0.0026 5.5E-08 44.2 4.8 31 8-39 1-31 (305)
362 TIGR01470 cysG_Nterm siroheme 96.8 0.0089 1.9E-07 40.1 7.1 36 5-41 7-42 (205)
363 PRK08293 3-hydroxybutyryl-CoA 96.8 0.0034 7.3E-08 43.7 5.2 35 6-41 2-36 (287)
364 PRK09260 3-hydroxybutyryl-CoA 96.7 0.0037 8E-08 43.5 5.1 33 8-41 2-34 (288)
365 PRK01438 murD UDP-N-acetylmura 96.7 0.0077 1.7E-07 44.6 6.9 35 6-41 15-49 (480)
366 PRK05708 2-dehydropantoate 2-r 96.7 0.0038 8.2E-08 44.0 5.0 33 7-40 2-34 (305)
367 PRK06130 3-hydroxybutyryl-CoA 96.7 0.0046 9.9E-08 43.4 5.4 34 7-41 4-37 (311)
368 cd01065 NAD_bind_Shikimate_DH 96.7 0.0057 1.2E-07 38.4 5.3 36 5-41 17-53 (155)
369 PRK11259 solA N-methyltryptoph 96.7 0.0039 8.4E-08 44.2 4.9 33 8-41 4-36 (376)
370 PRK14618 NAD(P)H-dependent gly 96.7 0.0041 8.9E-08 44.0 5.0 34 7-41 4-37 (328)
371 PRK07819 3-hydroxybutyryl-CoA 96.7 0.0048 1E-07 43.2 5.2 35 7-42 5-39 (286)
372 PRK07417 arogenate dehydrogena 96.6 0.0041 9E-08 43.2 4.7 33 8-41 1-33 (279)
373 PRK07679 pyrroline-5-carboxyla 96.6 0.0053 1.2E-07 42.6 5.1 36 5-41 1-40 (279)
374 TIGR00978 asd_EA aspartate-sem 96.6 0.0045 9.7E-08 44.4 4.9 32 8-39 1-33 (341)
375 PLN02256 arogenate dehydrogena 96.6 0.0061 1.3E-07 43.2 5.2 36 5-41 34-69 (304)
376 TIGR01850 argC N-acetyl-gamma- 96.6 0.0045 9.8E-08 44.5 4.6 30 8-37 1-31 (346)
377 TIGR03026 NDP-sugDHase nucleot 96.6 0.0045 9.7E-08 45.2 4.6 33 8-41 1-33 (411)
378 PRK08818 prephenate dehydrogen 96.6 0.0058 1.3E-07 44.6 5.1 36 6-41 3-39 (370)
379 PF01113 DapB_N: Dihydrodipico 96.5 0.0051 1.1E-07 38.0 4.2 34 8-41 1-36 (124)
380 PTZ00325 malate dehydrogenase; 96.5 0.0058 1.3E-07 43.7 5.0 36 5-40 6-43 (321)
381 PRK14194 bifunctional 5,10-met 96.5 0.012 2.6E-07 41.9 6.5 37 5-41 157-193 (301)
382 PLN02819 lysine-ketoglutarate 96.5 0.014 3.1E-07 47.5 7.5 64 6-77 568-645 (1042)
383 PF02558 ApbA: Ketopantoate re 96.5 0.007 1.5E-07 37.9 4.8 31 10-41 1-31 (151)
384 cd01080 NAD_bind_m-THF_DH_Cycl 96.5 0.0089 1.9E-07 39.0 5.3 38 4-41 41-78 (168)
385 PRK14620 NAD(P)H-dependent gly 96.5 0.006 1.3E-07 43.1 4.9 33 8-41 1-33 (326)
386 COG0665 DadA Glycine/D-amino a 96.5 0.0071 1.5E-07 42.9 5.3 36 5-41 2-37 (387)
387 PF01210 NAD_Gly3P_dh_N: NAD-d 96.5 0.0053 1.1E-07 39.3 4.2 32 9-41 1-32 (157)
388 COG0289 DapB Dihydrodipicolina 96.5 0.03 6.5E-07 39.2 8.0 37 6-42 1-39 (266)
389 PRK07531 bifunctional 3-hydrox 96.4 0.0068 1.5E-07 45.5 5.1 34 7-41 4-37 (495)
390 PRK08040 putative semialdehyde 96.4 0.007 1.5E-07 43.6 4.8 34 6-39 3-39 (336)
391 COG1893 ApbA Ketopantoate redu 96.4 0.012 2.7E-07 41.7 5.9 33 8-41 1-33 (307)
392 PF04127 DFP: DNA / pantothena 96.4 0.0095 2.1E-07 39.5 5.0 36 6-41 2-53 (185)
393 PF01266 DAO: FAD dependent ox 96.4 0.0077 1.7E-07 41.7 4.8 31 9-40 1-31 (358)
394 PF03807 F420_oxidored: NADP o 96.4 0.01 2.3E-07 34.4 4.7 31 9-40 1-35 (96)
395 PLN02948 phosphoribosylaminoim 96.4 0.023 4.9E-07 43.6 7.6 37 4-41 19-55 (577)
396 PRK09288 purT phosphoribosylgl 96.4 0.022 4.8E-07 41.0 7.3 35 6-41 11-45 (395)
397 PRK15461 NADH-dependent gamma- 96.4 0.0073 1.6E-07 42.3 4.6 33 8-41 2-34 (296)
398 COG0026 PurK Phosphoribosylami 96.3 0.022 4.8E-07 41.6 6.8 65 7-84 1-65 (375)
399 PRK00258 aroE shikimate 5-dehy 96.3 0.012 2.6E-07 40.9 5.4 36 5-41 121-157 (278)
400 PRK11559 garR tartronate semia 96.3 0.01 2.2E-07 41.3 4.9 34 7-41 2-35 (296)
401 PF13241 NAD_binding_7: Putati 96.3 0.008 1.7E-07 35.9 3.8 35 5-40 5-39 (103)
402 cd01337 MDH_glyoxysomal_mitoch 96.3 0.01 2.2E-07 42.3 4.9 33 8-40 1-35 (310)
403 PRK05868 hypothetical protein; 96.3 0.011 2.5E-07 42.4 5.2 35 7-42 1-35 (372)
404 PRK08057 cobalt-precorrin-6x r 96.2 0.037 8.1E-07 38.3 7.5 33 7-40 2-34 (248)
405 PRK11880 pyrroline-5-carboxyla 96.2 0.011 2.3E-07 40.5 4.8 34 7-41 2-38 (267)
406 PRK07688 thiamine/molybdopteri 96.2 0.0094 2E-07 42.9 4.6 36 5-41 22-58 (339)
407 PF01494 FAD_binding_3: FAD bi 96.2 0.014 3E-07 40.4 5.3 34 9-43 3-36 (356)
408 PRK14188 bifunctional 5,10-met 96.2 0.026 5.7E-07 40.1 6.8 37 4-40 155-192 (296)
409 PRK08163 salicylate hydroxylas 96.2 0.014 3E-07 41.8 5.4 36 6-42 3-38 (396)
410 PRK15057 UDP-glucose 6-dehydro 96.1 0.011 2.3E-07 43.3 4.7 32 8-41 1-32 (388)
411 PRK11863 N-acetyl-gamma-glutam 96.1 0.013 2.9E-07 41.8 5.0 34 7-40 2-36 (313)
412 TIGR01142 purT phosphoribosylg 96.1 0.033 7.3E-07 39.9 7.1 32 9-41 1-32 (380)
413 PRK06753 hypothetical protein; 96.1 0.014 3.1E-07 41.4 5.1 34 8-42 1-34 (373)
414 PRK06223 malate dehydrogenase; 96.1 0.016 3.5E-07 40.6 5.4 34 7-41 2-36 (307)
415 TIGR03364 HpnW_proposed FAD de 96.1 0.012 2.7E-07 41.7 4.8 32 9-41 2-33 (365)
416 TIGR00872 gnd_rel 6-phosphoglu 96.1 0.013 2.8E-07 41.1 4.8 33 8-41 1-33 (298)
417 TIGR01316 gltA glutamate synth 96.1 0.03 6.4E-07 41.4 6.8 34 7-41 272-305 (449)
418 PTZ00318 NADH dehydrogenase-li 96.1 0.012 2.6E-07 43.0 4.7 37 5-42 8-44 (424)
419 TIGR02354 thiF_fam2 thiamine b 96.1 0.01 2.2E-07 39.7 4.0 35 5-40 19-54 (200)
420 COG0287 TyrA Prephenate dehydr 96.1 0.017 3.7E-07 40.6 5.2 35 7-42 3-37 (279)
421 PLN02712 arogenate dehydrogena 96.1 0.016 3.5E-07 45.2 5.5 35 5-40 50-84 (667)
422 PRK09599 6-phosphogluconate de 96.0 0.015 3.3E-07 40.8 4.8 33 8-41 1-33 (301)
423 PF10727 Rossmann-like: Rossma 96.0 0.0062 1.3E-07 38.1 2.6 33 5-38 8-40 (127)
424 PRK12475 thiamine/molybdopteri 96.0 0.013 2.9E-07 42.1 4.6 37 4-41 21-58 (338)
425 TIGR02853 spore_dpaA dipicolin 96.0 0.02 4.3E-07 40.3 5.3 35 6-41 150-184 (287)
426 TIGR00507 aroE shikimate 5-deh 96.0 0.018 3.9E-07 39.8 5.1 34 7-41 117-150 (270)
427 TIGR01758 MDH_euk_cyt malate d 96.0 0.023 4.9E-07 40.7 5.6 33 9-41 1-40 (324)
428 TIGR01377 soxA_mon sarcosine o 96.0 0.014 3E-07 41.5 4.5 31 9-40 2-32 (380)
429 TIGR01505 tartro_sem_red 2-hyd 96.0 0.012 2.6E-07 40.9 4.1 32 9-41 1-32 (291)
430 cd08259 Zn_ADH5 Alcohol dehydr 96.0 0.021 4.4E-07 39.4 5.2 35 7-41 163-197 (332)
431 COG2084 MmsB 3-hydroxyisobutyr 96.0 0.033 7.2E-07 39.4 6.2 66 8-79 1-76 (286)
432 PRK05732 2-octaprenyl-6-methox 95.9 0.017 3.7E-07 41.2 4.7 35 5-40 1-38 (395)
433 PRK06847 hypothetical protein; 95.9 0.024 5.3E-07 40.2 5.4 35 7-42 4-38 (375)
434 PF02826 2-Hacid_dh_C: D-isome 95.9 0.029 6.3E-07 36.5 5.4 37 5-42 34-70 (178)
435 PRK15059 tartronate semialdehy 95.8 0.019 4.1E-07 40.3 4.6 33 8-41 1-33 (292)
436 TIGR01161 purK phosphoribosyla 95.8 0.051 1.1E-06 38.8 6.8 57 9-77 1-57 (352)
437 PRK07494 2-octaprenyl-6-methox 95.8 0.023 4.9E-07 40.6 5.0 35 7-42 7-41 (388)
438 COG1004 Ugd Predicted UDP-gluc 95.8 0.023 5E-07 41.9 5.1 34 8-42 1-34 (414)
439 PLN02712 arogenate dehydrogena 95.8 0.022 4.8E-07 44.4 5.3 35 6-41 368-402 (667)
440 PRK01747 mnmC bifunctional tRN 95.8 0.018 3.9E-07 44.5 4.7 33 8-41 261-293 (662)
441 PRK09126 hypothetical protein; 95.8 0.023 5E-07 40.6 5.0 35 7-42 3-37 (392)
442 cd05191 NAD_bind_amino_acid_DH 95.8 0.046 1E-06 31.4 5.4 34 5-39 21-55 (86)
443 KOG0023 Alcohol dehydrogenase, 95.8 0.091 2E-06 38.1 7.8 64 5-77 180-243 (360)
444 PRK12490 6-phosphogluconate de 95.8 0.023 5.1E-07 39.8 4.9 33 8-41 1-33 (299)
445 PRK08013 oxidoreductase; Provi 95.8 0.024 5.1E-07 41.0 5.0 35 7-42 3-37 (400)
446 PRK08773 2-octaprenyl-3-methyl 95.7 0.028 6.2E-07 40.3 5.3 39 1-41 1-39 (392)
447 PRK00048 dihydrodipicolinate r 95.7 0.028 6E-07 38.8 5.1 32 7-38 1-33 (257)
448 PF00743 FMO-like: Flavin-bind 95.7 0.022 4.8E-07 43.2 4.9 35 7-42 1-35 (531)
449 cd00704 MDH Malate dehydrogena 95.7 0.023 4.9E-07 40.7 4.7 33 9-41 2-41 (323)
450 cd05292 LDH_2 A subgroup of L- 95.7 0.026 5.7E-07 39.9 5.0 33 8-41 1-35 (308)
451 PRK06728 aspartate-semialdehyd 95.7 0.035 7.6E-07 40.2 5.6 32 7-38 5-40 (347)
452 PRK13512 coenzyme A disulfide 95.7 0.025 5.5E-07 41.6 5.0 34 7-41 1-36 (438)
453 PRK05335 tRNA (uracil-5-)-meth 95.7 0.027 5.8E-07 42.0 5.1 34 7-41 2-35 (436)
454 PLN02172 flavin-containing mon 95.7 0.027 5.8E-07 42.0 5.1 36 5-41 8-43 (461)
455 cd01485 E1-1_like Ubiquitin ac 95.7 0.017 3.6E-07 38.5 3.7 36 5-41 17-53 (198)
456 PRK01710 murD UDP-N-acetylmura 95.7 0.054 1.2E-06 40.1 6.7 34 7-41 14-47 (458)
457 PRK12770 putative glutamate sy 95.7 0.034 7.3E-07 39.6 5.4 35 7-42 18-52 (352)
458 PRK08849 2-octaprenyl-3-methyl 95.7 0.029 6.3E-07 40.3 5.1 33 8-41 4-36 (384)
459 PRK12831 putative oxidoreducta 95.7 0.063 1.4E-06 40.0 7.0 35 6-41 280-314 (464)
460 PLN02520 bifunctional 3-dehydr 95.7 0.026 5.7E-07 42.8 5.1 36 5-41 377-412 (529)
461 PRK12480 D-lactate dehydrogena 95.6 0.032 6.9E-07 40.0 5.2 35 6-41 145-179 (330)
462 PRK07364 2-octaprenyl-6-methox 95.6 0.033 7.1E-07 40.1 5.3 35 7-42 18-52 (415)
463 TIGR01316 gltA glutamate synth 95.6 0.035 7.5E-07 41.1 5.5 35 6-41 132-166 (449)
464 PRK00066 ldh L-lactate dehydro 95.6 0.035 7.6E-07 39.5 5.4 36 6-42 5-42 (315)
465 PRK04308 murD UDP-N-acetylmura 95.6 0.039 8.6E-07 40.5 5.8 35 6-41 4-38 (445)
466 COG0002 ArgC Acetylglutamate s 95.6 0.02 4.3E-07 41.5 4.1 33 7-39 2-35 (349)
467 PRK07208 hypothetical protein; 95.6 0.033 7.1E-07 41.0 5.3 36 5-41 2-37 (479)
468 TIGR02279 PaaC-3OHAcCoADH 3-hy 95.6 0.03 6.5E-07 42.3 5.2 35 6-41 4-38 (503)
469 PRK07502 cyclohexadienyl dehyd 95.6 0.031 6.8E-07 39.2 4.9 34 7-41 6-41 (307)
470 PRK11728 hydroxyglutarate oxid 95.6 0.029 6.3E-07 40.4 4.9 33 8-41 3-37 (393)
471 TIGR01772 MDH_euk_gproteo mala 95.6 0.027 5.9E-07 40.2 4.6 33 9-41 1-35 (312)
472 PRK07538 hypothetical protein; 95.6 0.031 6.6E-07 40.5 5.0 34 8-42 1-34 (413)
473 PRK06126 hypothetical protein; 95.6 0.039 8.5E-07 41.5 5.7 37 5-42 5-41 (545)
474 PRK08268 3-hydroxy-acyl-CoA de 95.6 0.039 8.5E-07 41.7 5.6 35 7-42 7-41 (507)
475 PRK06184 hypothetical protein; 95.5 0.038 8.3E-07 41.2 5.5 37 5-42 1-37 (502)
476 smart00859 Semialdhyde_dh Semi 95.5 0.032 7E-07 33.9 4.3 32 9-40 1-34 (122)
477 TIGR00518 alaDH alanine dehydr 95.5 0.089 1.9E-06 38.2 7.2 36 5-41 165-200 (370)
478 cd01338 MDH_choloroplast_like 95.5 0.037 8.1E-07 39.6 5.1 35 7-41 2-43 (322)
479 PRK06545 prephenate dehydrogen 95.5 0.031 6.8E-07 40.3 4.8 34 8-42 1-34 (359)
480 PRK08850 2-octaprenyl-6-methox 95.5 0.03 6.5E-07 40.4 4.7 35 5-40 2-36 (405)
481 PRK11749 dihydropyrimidine deh 95.5 0.032 7E-07 41.2 4.9 35 6-41 139-173 (457)
482 PRK07588 hypothetical protein; 95.5 0.037 7.9E-07 39.7 5.1 34 8-42 1-34 (391)
483 TIGR01035 hemA glutamyl-tRNA r 95.5 0.04 8.6E-07 40.6 5.3 37 4-41 177-214 (417)
484 cd05291 HicDH_like L-2-hydroxy 95.5 0.037 8E-07 39.0 5.0 34 8-42 1-36 (306)
485 PF00899 ThiF: ThiF family; I 95.5 0.036 7.7E-07 34.4 4.4 34 7-41 2-36 (135)
486 PRK14192 bifunctional 5,10-met 95.5 0.041 9E-07 38.7 5.2 36 5-40 157-192 (283)
487 TIGR02356 adenyl_thiF thiazole 95.4 0.033 7.3E-07 37.1 4.5 37 4-41 18-55 (202)
488 COG0654 UbiH 2-polyprenyl-6-me 95.4 0.033 7.2E-07 40.2 4.8 33 7-40 2-34 (387)
489 PRK05442 malate dehydrogenase; 95.4 0.041 8.8E-07 39.5 5.1 36 6-41 3-45 (326)
490 PLN02688 pyrroline-5-carboxyla 95.4 0.036 7.9E-07 37.9 4.7 32 8-40 1-37 (266)
491 PRK06567 putative bifunctional 95.4 0.035 7.6E-07 45.2 5.2 35 5-40 381-415 (1028)
492 PRK06928 pyrroline-5-carboxyla 95.4 0.041 8.9E-07 38.3 5.0 33 8-41 2-38 (277)
493 PRK06598 aspartate-semialdehyd 95.4 0.029 6.3E-07 41.0 4.4 33 8-40 2-38 (369)
494 COG3268 Uncharacterized conser 95.4 0.028 6.2E-07 40.8 4.2 34 8-41 7-40 (382)
495 PRK13302 putative L-aspartate 95.4 0.044 9.6E-07 38.2 5.1 36 1-38 1-38 (271)
496 TIGR02130 dapB_plant dihydrodi 95.4 0.14 3E-06 36.2 7.5 29 9-37 2-30 (275)
497 PLN02353 probable UDP-glucose 95.4 0.037 8.1E-07 41.6 5.0 34 7-41 1-36 (473)
498 PRK14179 bifunctional 5,10-met 95.4 0.052 1.1E-06 38.4 5.4 33 5-37 156-188 (284)
499 COG1252 Ndh NADH dehydrogenase 95.4 0.042 9.1E-07 40.6 5.1 37 5-42 1-39 (405)
500 KOG0029 Amine oxidase [Seconda 95.4 0.033 7.3E-07 42.1 4.7 36 5-41 13-49 (501)
No 1
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.56 E-value=1.7e-14 Score=102.22 Aligned_cols=70 Identities=17% Similarity=0.197 Sum_probs=58.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+++|+|||||||||+|++++|+++||.|++.+|++.. +.+..++..++. .+.+++++|+.|++++..++
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~---~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai 76 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPED---EKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAI 76 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcch---hhhHHHHHhcccCcccceEEeccccccchHHHHH
Confidence 45799999999999999999999999999999998753 234445566653 34899999999999999986
No 2
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.48 E-value=9.2e-14 Score=97.25 Aligned_cols=62 Identities=16% Similarity=0.270 Sum_probs=51.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+|||||||+|++++++|+++||+|++++|+.+. . ..+...+++++++|++|++.+.+++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~------~---~~l~~~~v~~v~~Dl~d~~~l~~al 62 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRK------A---SFLKEWGAELVYGDLSLPETLPPSF 62 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHH------h---hhHhhcCCEEEECCCCCHHHHHHHH
Confidence 589999999999999999999999999999997421 1 1122347899999999999998875
No 3
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.38 E-value=1.7e-12 Score=91.15 Aligned_cols=65 Identities=18% Similarity=0.242 Sum_probs=53.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|+||||||+||||||.+.+|++.||+|+++++.+++. ++ .+.....+++++|+.|.+.+++.+.+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~--~~------~v~~~~~~f~~gDi~D~~~L~~vf~~ 65 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGH--KI------ALLKLQFKFYEGDLLDRALLTAVFEE 65 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCC--HH------HhhhccCceEEeccccHHHHHHHHHh
Confidence 5899999999999999999999999999999987653 21 12211168999999999999987644
No 4
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.37 E-value=3.4e-12 Score=90.42 Aligned_cols=72 Identities=13% Similarity=0.005 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hh---hcCCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KE---FQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~---l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.+|+|+|||||||||++|+++|+++|++|++++|..... ....... .. .....++++.+|+.|.+.+...+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~ 88 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGY--QHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKAC 88 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcc--hhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh
Confidence 4568999999999999999999999999999999865322 1111100 00 11125789999999988877654
No 5
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.36 E-value=4.1e-12 Score=89.53 Aligned_cols=71 Identities=14% Similarity=0.039 Sum_probs=51.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hh---cCCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EF---QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l---~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++|+|||||||||++++++|++.|++|++++|..... .......+. .. ...+++++++|++|.+.+.+.+.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~ 75 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSF-NTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIID 75 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCccc-chhhhhhhhhccccccccceeEEEeccCCHHHHHHHHH
Confidence 5899999999999999999999999999999975321 001111110 00 02358999999999998888753
No 6
>PLN02427 UDP-apiose/xylose synthase
Probab=99.35 E-value=3.2e-12 Score=91.46 Aligned_cols=71 Identities=10% Similarity=0.083 Sum_probs=52.8
Q ss_pred CCCC-CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhh
Q 037506 2 EGKN-TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTS 75 (91)
Q Consensus 2 ~~~~-~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~ 75 (91)
+||. ..|+|+|||||||||++|+++|+++ +++|++++|+... ...+... ...+++++.+|++|.+.+.
T Consensus 8 ~~~~~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~------~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~ 81 (386)
T PLN02427 8 DGKPIKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDK------IKHLLEPDTVPWSGRIQFHRINIKHDSRLE 81 (386)
T ss_pred CCCcccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchh------hhhhhccccccCCCCeEEEEcCCCChHHHH
Confidence 4553 3568999999999999999999998 5999999986422 1111111 1136899999999998888
Q ss_pred HHH
Q 037506 76 SQR 78 (91)
Q Consensus 76 ~~~ 78 (91)
+++
T Consensus 82 ~~~ 84 (386)
T PLN02427 82 GLI 84 (386)
T ss_pred HHh
Confidence 764
No 7
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.35 E-value=4.9e-12 Score=87.85 Aligned_cols=69 Identities=14% Similarity=0.112 Sum_probs=51.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.++|+|||||||||++++++|+++||+|++++|+.... .....+.... ..+++++++|++|++.+.+++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDP---KKTEHLLALDGAKERLHLFKANLLEEGSFDSVV 74 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCch---hhHHHHHhccCCCCceEEEeccccCcchHHHHH
Confidence 47899999999999999999999999999999875321 1111111111 236789999999988887764
No 8
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.34 E-value=9.3e-12 Score=80.40 Aligned_cols=59 Identities=27% Similarity=0.375 Sum_probs=51.2
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+|+||||++|++++++|+++|++|++++|++. +.+. ..+++++.+|+.|++.+.+++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~------~~~~-----~~~~~~~~~d~~d~~~~~~al~ 59 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPS------KAED-----SPGVEIIQGDLFDPDSVKAALK 59 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGG------GHHH-----CTTEEEEESCTTCHHHHHHHHT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCch------hccc-----ccccccceeeehhhhhhhhhhh
Confidence 799999999999999999999999999999752 2221 4589999999999999999864
No 9
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.34 E-value=7.5e-12 Score=87.95 Aligned_cols=71 Identities=17% Similarity=0.213 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.+++|+||||+||||++++++|+++|++|++++|+.... ........+.. ..++++.+|++|++.+.+.+
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 78 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQ---KKIAHLRALQELGDLKIFGADLTDEESFEAPI 78 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCH---HHHHHHHhcCCCCceEEEEcCCCChHHHHHHH
Confidence 4568899999999999999999999999999999875321 11111111211 25789999999998888765
No 10
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.33 E-value=8.8e-12 Score=91.40 Aligned_cols=76 Identities=16% Similarity=0.126 Sum_probs=53.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-c-------------chHHHhhhhcCCCeEEEEeeCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-P-------------SKLEIHKEFQGIGVTIIENLCD 69 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~-------------~~~~~~~~l~~~~v~~v~gDl~ 69 (91)
+..+|+|+|||||||||++|+++|+++|++|++++|....... . +....+......+++++++|++
T Consensus 44 ~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~ 123 (442)
T PLN02572 44 SSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDIC 123 (442)
T ss_pred cccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCC
Confidence 4556899999999999999999999999999998864321100 0 0000001111236899999999
Q ss_pred ChhhhhHHHh
Q 037506 70 VGQVTSSQRM 79 (91)
Q Consensus 70 d~~~l~~~~~ 79 (91)
|.+.+.+++.
T Consensus 124 d~~~v~~~l~ 133 (442)
T PLN02572 124 DFEFLSEAFK 133 (442)
T ss_pred CHHHHHHHHH
Confidence 9999888753
No 11
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.32 E-value=1.2e-11 Score=86.25 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..++|+|||||||||++++++|+++||+|++++|+.... .......... ...++++++|++|++.+.+++
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDR---KKTEHLLALDGAKERLKLFKADLLEESSFEQAI 75 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcch---HHHHHHHhccCCCCceEEEecCCCCcchHHHHH
Confidence 357899999999999999999999999999999975421 1111111111 236899999999999888765
No 12
>PLN02583 cinnamoyl-CoA reductase
Probab=99.32 E-value=1e-11 Score=86.29 Aligned_cols=70 Identities=10% Similarity=0.082 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.++|+|||||||||++++++|+++||+|++++|+.... .....+..+. ..+++++++|++|.+.+.+++
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~---~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l 76 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGET---EIEKEIRGLSCEEERLKVFDVDPLDYHSILDAL 76 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhh---hHHHHHHhcccCCCceEEEEecCCCHHHHHHHH
Confidence 356899999999999999999999999999999864211 1111112221 235889999999999888775
No 13
>PLN02650 dihydroflavonol-4-reductase
Probab=99.32 E-value=1e-11 Score=87.74 Aligned_cols=71 Identities=14% Similarity=0.188 Sum_probs=52.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.++++|||||||||||++++++|+++|++|++++|+.... .......... ...++++.+|++|.+.+.+.+
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~ 75 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANV---KKVKHLLDLPGATTRLTLWKADLAVEGSFDDAI 75 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchh---HHHHHHHhccCCCCceEEEEecCCChhhHHHHH
Confidence 3567999999999999999999999999999999875321 1111111111 124789999999998888764
No 14
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.29 E-value=3.6e-11 Score=79.77 Aligned_cols=74 Identities=16% Similarity=-0.000 Sum_probs=57.0
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|...+..++++||||+|+||++++++|+++|++|++++|+..+. .+....+...+.+++.+|+.|.+.+.+.+.
T Consensus 1 ~~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (239)
T PRK12828 1 MEHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPL-----SQTLPGVPADALRIGGIDLVDPQAARRAVD 74 (239)
T ss_pred CCCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhH-----HHHHHHHhhcCceEEEeecCCHHHHHHHHH
Confidence 45556678999999999999999999999999999999975321 112223333467889999999998887653
No 15
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.28 E-value=2.5e-11 Score=87.71 Aligned_cols=74 Identities=22% Similarity=0.261 Sum_probs=54.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
...++|+|||||||||++++++|+++||+|++++|+............... ...+++++++|++|++.+.+.+.
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-~~~~v~~v~~Dl~d~~~l~~~~~ 131 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-ELPGAEVVFGDVTDADSLRKVLF 131 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-hcCCceEEEeeCCCHHHHHHHHH
Confidence 456799999999999999999999999999999997643200000000011 12378999999999999988753
No 16
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.27 E-value=2.6e-11 Score=85.31 Aligned_cols=75 Identities=16% Similarity=0.083 Sum_probs=54.1
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh---hcCCCeEEEEeeCCChhhhhHHH
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE---FQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~---l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|....++|+||||+||||++++++|+++|++|++++|..... .......+.. .....++++++|++|.+.+.+.+
T Consensus 2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (340)
T PLN02653 2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNF-NTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWL 79 (340)
T ss_pred CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccc-cccchhhhccccccccCceEEEEecCCCHHHHHHHH
Confidence 344568899999999999999999999999999999875321 0111111100 01235789999999999888765
No 17
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.27 E-value=3.5e-11 Score=82.50 Aligned_cols=75 Identities=12% Similarity=0.059 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
.+++++||||+|+||++++++|+++|++|++++|+. ++...+......++.++.+|++|++.+.+.+......+
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSE------AARADFEALHPDRALARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCH------HHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999964 22222222222357889999999999988764433333
Q ss_pred h
Q 037506 86 G 86 (91)
Q Consensus 86 ~ 86 (91)
|
T Consensus 77 ~ 77 (277)
T PRK06180 77 G 77 (277)
T ss_pred C
Confidence 3
No 18
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.26 E-value=3.6e-11 Score=84.15 Aligned_cols=69 Identities=19% Similarity=0.308 Sum_probs=50.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+|||||||||++++++|+++|++|++++|..... ......+..+....+.++.+|++|++.+..++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 69 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSK--RSVLPVIERLGGKHPTFVEGDIRNEALLTEIL 69 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCch--HhHHHHHHHhcCCCceEEEccCCCHHHHHHHH
Confidence 5799999999999999999999999999998753221 11111112222335688999999998888765
No 19
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.26 E-value=2.4e-11 Score=85.99 Aligned_cols=69 Identities=16% Similarity=0.272 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+.|+|+||||+||||++++++|+++|++|++++|+.... ......+. ..+++++.+|++|.+.+.+++
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKS-----LHLLSKWKEGDRLRLFRADLQEEGSFDEAV 77 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHH-----HHHHHhhccCCeEEEEECCCCCHHHHHHHH
Confidence 4578999999999999999999999999999999864221 11111111 235889999999998888764
No 20
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.26 E-value=4.3e-11 Score=80.68 Aligned_cols=75 Identities=9% Similarity=0.035 Sum_probs=56.2
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|-+++..++++||||+|+||++++++|+++|++|++++|+.... .+....+. ...+.++++|++|++.+.+++
T Consensus 1 ~~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (262)
T PRK13394 1 MMSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGA-----NAVADEINKAGGKAIGVAMDVTNEDAVNAGI 75 (262)
T ss_pred CcccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHH-----HHHHHHHHhcCceEEEEECCCCCHHHHHHHH
Confidence 44456678999999999999999999999999999999975221 11112222 224678999999999988875
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 76 ~~ 77 (262)
T PRK13394 76 DK 77 (262)
T ss_pred HH
Confidence 43
No 21
>PLN02214 cinnamoyl-CoA reductase
Probab=99.25 E-value=3.9e-11 Score=85.00 Aligned_cols=69 Identities=14% Similarity=0.154 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+++|+||||+||||++++++|+++||+|++++|+.... ....+..+.. ..++++.+|++|.+.+.+++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 79 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDP----KNTHLRELEGGKERLILCKADLQDYEALKAAI 79 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhh----hHHHHHHhhCCCCcEEEEecCcCChHHHHHHH
Confidence 457899999999999999999999999999999975321 1111112211 25788999999999888764
No 22
>PLN02686 cinnamoyl-CoA reductase
Probab=99.25 E-value=3.6e-11 Score=86.07 Aligned_cols=68 Identities=13% Similarity=0.119 Sum_probs=52.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--------CCCeEEEEeeCCChhhhhH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--------GIGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--------~~~v~~v~gDl~d~~~l~~ 76 (91)
+.+++|+||||+||||++++++|+++||+|++++|+.. ....+..+. ..+++++++|++|.+.+.+
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~------~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~ 124 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQE------DKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHE 124 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHH
Confidence 45678999999999999999999999999999888642 111111211 1257899999999998888
Q ss_pred HH
Q 037506 77 QR 78 (91)
Q Consensus 77 ~~ 78 (91)
++
T Consensus 125 ~i 126 (367)
T PLN02686 125 AF 126 (367)
T ss_pred HH
Confidence 65
No 23
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.24 E-value=6.1e-11 Score=82.78 Aligned_cols=69 Identities=12% Similarity=0.069 Sum_probs=51.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.++++||||+||||++++++|+++||+|++++|+.... .......... ..+++++.+|++|++.+.+.+
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~---~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 75 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDR---KKTDHLLALDGAKERLKLFKADLLDEGSFELAI 75 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcch---hhHHHHHhccCCCCceEEEeCCCCCchHHHHHH
Confidence 57899999999999999999999999999998875321 1111111111 135789999999998888765
No 24
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.24 E-value=5.1e-11 Score=84.20 Aligned_cols=69 Identities=14% Similarity=0.163 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..|+|+||||+||||+++++.|+++|++|++++|+.... +...... .. ...++++.+|++|.+.+.+.+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~--~~~~~~~-~~-~~~~~~~~~Dl~~~~~~~~~~ 71 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTS--PNLFELL-NL-AKKIEDHFGDIRDAAKLRKAI 71 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccc--hhHHHHH-hh-cCCceEEEccCCCHHHHHHHH
Confidence 357899999999999999999999999999999875321 1111111 11 225778999999999888765
No 25
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.24 E-value=3.6e-11 Score=85.14 Aligned_cols=72 Identities=18% Similarity=0.229 Sum_probs=56.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++||||||+||||+|.+-+|+++||.|.++++..... .........+-. .++.++++|++|.+.+++.+..
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~ 75 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE 75 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh
Confidence 35899999999999999999999999999999865432 222233333332 5799999999999999998754
No 26
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.23 E-value=3.7e-11 Score=83.22 Aligned_cols=62 Identities=24% Similarity=0.418 Sum_probs=50.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+||||+||||+++++.|+++|++|++++|+.... ..+...+++++++|+.|.+.+.+++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~~~~~D~~~~~~l~~~~ 62 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDR---------RNLEGLDVEIVEGDLRDPASLRKAV 62 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccc---------cccccCCceEEEeeCCCHHHHHHHH
Confidence 4799999999999999999999999999999975321 1122336889999999998888764
No 27
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.23 E-value=6.2e-11 Score=78.81 Aligned_cols=72 Identities=13% Similarity=0.080 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh--cCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l--~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.+++|+||||||++|++++++|+++|++|+++.|..... ........ ...++.++.+|+.|++.+.+.+..
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 77 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEA----AEELVEAVEALGRRAQAVQADVTDKAALEAAVAA 77 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHH----HHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHH
Confidence 4567999999999999999999999999998878764211 11111111 123588999999999998887543
No 28
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.23 E-value=7.9e-11 Score=79.65 Aligned_cols=74 Identities=11% Similarity=0.101 Sum_probs=55.9
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|..++..++++||||+|+||++++++|+++|++|++++|+.. .......+. ...+.++.+|++|++.+.+.+
T Consensus 2 ~~~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (260)
T PRK12823 2 MNQRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL------VHEVAAELRAAGGEALALTADLETYAGAQAAM 75 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH------HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHH
Confidence 456677789999999999999999999999999999998631 111112222 224678899999998888765
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 76 ~~ 77 (260)
T PRK12823 76 AA 77 (260)
T ss_pred HH
Confidence 43
No 29
>PRK09135 pteridine reductase; Provisional
Probab=99.23 E-value=5.8e-11 Score=79.31 Aligned_cols=74 Identities=8% Similarity=0.016 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++|+||||+|+||++++++|+++|++|++++|..... .+.....+.......+.++.+|++|.+.+.+.+..
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 78 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAE-ADALAAELNALRPGSAAALQADLLDPDALPELVAA 78 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-HHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 346899999999999999999999999999999864211 00000111111123578899999999988887543
No 30
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.22 E-value=2.4e-11 Score=83.50 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=49.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+||||||++|++++++|+++|++|++++|+.+.. ...+++.+.+|+.|++++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~------------~~~~~~~~~~d~~d~~~l~~a~ 58 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSS------------AGPNEKHVKFDWLDEDTWDNPF 58 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccc------------cCCCCccccccCCCHHHHHHHH
Confidence 489999999999999999999999999999985321 1136777889999999998875
No 31
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.22 E-value=6.2e-11 Score=79.26 Aligned_cols=71 Identities=8% Similarity=-0.023 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++|+||||+|++|.+++++|+++|++|++++|+.... ......+. ...+.++.+|+.|++.+.+.+..
T Consensus 4 ~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (251)
T PRK12826 4 LEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDA-----AATAELVEAAGGKARARQVDVRDRAALKAAVAA 76 (251)
T ss_pred CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999974211 11112222 22478899999999998887643
No 32
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.22 E-value=7.5e-11 Score=79.24 Aligned_cols=70 Identities=10% Similarity=-0.007 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|+.|++.+.+++.
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 73 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAA-----AAAAEALQKAGGKAIGVAMDVTDEEAINAGID 73 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4457899999999999999999999999999999975321 11112221 2357889999999999888753
No 33
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.22 E-value=1.1e-10 Score=78.45 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++.++++||||+|+||++++++|+++|++|++++|+.... .......+. ...+.++++|++|++.+.+.+.
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPR----ANKVVAEIEAAGGRASAVGADLTDEESVAALMD 76 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHh----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 5567899999999999999999999999999999864211 111111121 2357889999999998887653
No 34
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.22 E-value=3.7e-11 Score=80.65 Aligned_cols=70 Identities=16% Similarity=0.096 Sum_probs=51.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+++||||+|+||.+++++|+++|++|++++|+.... ....+.+......+++++++|+.|++.+.+.+
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 70 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERL--ERLADDLRARGAVAVSTHELDILDTASHAAFL 70 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHH--HHHHHHHHHhcCCeEEEEecCCCChHHHHHHH
Confidence 36899999999999999999999999999999975321 00111111111236889999999999888864
No 35
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.22 E-value=7.1e-11 Score=83.36 Aligned_cols=63 Identities=14% Similarity=0.186 Sum_probs=47.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCC-ChhhhhHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCD-VGQVTSSQ 77 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~-d~~~l~~~ 77 (91)
+|+|+|||||||||++|+++|++. ||+|++++|... +.. ......+++++.+|+. +.+.+.+.
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~------~~~--~~~~~~~~~~~~~Dl~~~~~~~~~~ 65 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTD------RLG--DLVNHPRMHFFEGDITINKEWIEYH 65 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHH------HHH--HhccCCCeEEEeCCCCCCHHHHHHH
Confidence 368999999999999999999986 699999998532 111 1112246899999997 66666554
No 36
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.22 E-value=1e-10 Score=77.74 Aligned_cols=71 Identities=10% Similarity=0.104 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|.+++|+||||+|++|.+++++|+++|++|+++.|+.... ......+. ...+.++.+|+.|++.+...+..
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAA-----EALAAELRAAGGEARVLVFDVSDEAAVRALIEA 75 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHH-----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 4457899999999999999999999999999999975321 11112222 23578889999999988776543
No 37
>PRK06182 short chain dehydrogenase; Validated
Probab=99.21 E-value=8.6e-11 Score=80.25 Aligned_cols=65 Identities=20% Similarity=0.244 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.+++++||||+|+||++++++|+++|++|++++|+. ++.. .+...+++++.+|++|++.+.+.+.
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~------~~l~---~~~~~~~~~~~~Dv~~~~~~~~~~~ 66 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRV------DKME---DLASLGVHPLSLDVTDEASIKAAVD 66 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHH---HHHhCCCeEEEeeCCCHHHHHHHHH
Confidence 457899999999999999999999999999999964 2222 2223368899999999999888754
No 38
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.21 E-value=5.7e-11 Score=85.14 Aligned_cols=64 Identities=13% Similarity=0.085 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..|+|+|||||||||++++++|.++||+|++++|..... . .. .....+++.+|++|.+.+.+.+
T Consensus 20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~-----~---~~-~~~~~~~~~~Dl~d~~~~~~~~ 83 (370)
T PLN02695 20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEH-----M---SE-DMFCHEFHLVDLRVMENCLKVT 83 (370)
T ss_pred CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccc-----c---cc-ccccceEEECCCCCHHHHHHHH
Confidence 457999999999999999999999999999999864211 0 00 0113577888998877766643
No 39
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.21 E-value=1.1e-10 Score=78.46 Aligned_cols=73 Identities=14% Similarity=0.048 Sum_probs=54.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
++++||||+|+||++++++|+++|++|++++|.... ....+......++.++.+|++|++.+++.+...-..+
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 74 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENK-----ELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSI 74 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchH-----HHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 589999999999999999999999999999986421 1111111112367889999999999988764433333
No 40
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.21 E-value=9.5e-11 Score=78.97 Aligned_cols=71 Identities=13% Similarity=0.097 Sum_probs=53.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+.++++||||+|+||++++++|+++|++|++++|+... .......+. ...+.++.+|++|++.+.+.+...
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAER-----LDEVAAEIDDLGRRALAVPTDITDEDQCANLVALA 76 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHH
Confidence 45789999999999999999999999999999986421 111112222 235788999999999988875443
No 41
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.21 E-value=8.9e-11 Score=82.64 Aligned_cols=68 Identities=18% Similarity=0.273 Sum_probs=51.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.|+|+||||+||||++++++|+++| ++|++++|+... .......+...+++++.+|++|++.+.+++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~-----~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~ 72 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELK-----QWEMQQKFPAPCLRFFIGDVRDKERLTRAL 72 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhH-----HHHHHHHhCCCcEEEEEccCCCHHHHHHHH
Confidence 45789999999999999999999986 789999886421 111111222236889999999999988765
No 42
>PRK06194 hypothetical protein; Provisional
Probab=99.21 E-value=9.1e-11 Score=80.45 Aligned_cols=70 Identities=10% Similarity=0.010 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+.+++++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|++|.+.+.+.+.
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~ 75 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDAL-----DRAVAELRAQGAEVLGVRTDVSDAAQVEALAD 75 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 4567899999999999999999999999999999864211 11112222 2346779999999998888653
No 43
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.21 E-value=1.4e-10 Score=78.85 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=55.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS 84 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~ 84 (91)
+..++++||||+|+||++++++|+++|++|++++|+.. +.+.+.......+.++++|+.|++++.+.+......
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~------~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 76 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAA------GLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAA 76 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHH
Confidence 45689999999999999999999999999999998642 222222111235788999999999888875443333
Q ss_pred hh
Q 037506 85 LG 86 (91)
Q Consensus 85 ~~ 86 (91)
+|
T Consensus 77 ~g 78 (262)
T TIGR03325 77 FG 78 (262)
T ss_pred hC
Confidence 33
No 44
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.21 E-value=1.4e-10 Score=78.38 Aligned_cols=78 Identities=18% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|..++..++++||||+|+||.+++++|.++|++|.++.|... +... .+...++.++.+|++|++.+.+++..
T Consensus 1 m~~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~-----~~~~---~l~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (255)
T PRK06463 1 YSMRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAE-----NEAK---ELREKGVFTIKCDVGNRDQVKKSKEV 72 (255)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcH-----HHHH---HHHhCCCeEEEecCCCHHHHHHHHHH
Confidence 666677789999999999999999999999999998876531 1221 22223578999999999999887644
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
....+|
T Consensus 73 ~~~~~~ 78 (255)
T PRK06463 73 VEKEFG 78 (255)
T ss_pred HHHHcC
Confidence 333333
No 45
>PLN02240 UDP-glucose 4-epimerase
Probab=99.20 E-value=1e-10 Score=82.28 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++++|+|||||||+|++++++|+++|++|++++|..... .......... ...+++++.+|++|++.+.+++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~ 77 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSS--EEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVF 77 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcch--HHHHHHHHHhhcccCccceEEecCcCCHHHHHHHH
Confidence 3457899999999999999999999999999998754221 1111111111 1235789999999999888764
No 46
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.1e-10 Score=79.41 Aligned_cols=65 Identities=14% Similarity=0.126 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
..++++||||+|+||++++++|+++|++|++++|+.... . ...+++++++|++|++++.+++...
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~---------~--~~~~~~~~~~D~~d~~~~~~~~~~~ 67 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARA---------A--PIPGVELLELDVTDDASVQAAVDEV 67 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhc---------c--ccCCCeeEEeecCCHHHHHHHHHHH
Confidence 346899999999999999999999999999999974221 1 1236889999999999998876443
No 47
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.2e-10 Score=78.61 Aligned_cols=73 Identities=14% Similarity=0.066 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..+..++++||||+|+||++++++|+++|++|++++|+... ............+.++.+|++|++.+.+.+..
T Consensus 7 ~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (264)
T PRK12829 7 KPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAA-----LAATAARLPGAKVTATVADVADPAQVERVFDT 79 (264)
T ss_pred hccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHhcCceEEEEccCCCHHHHHHHHHH
Confidence 34566899999999999999999999999999999996421 11111222222568899999999988876543
No 48
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.7e-10 Score=77.92 Aligned_cols=74 Identities=11% Similarity=0.125 Sum_probs=58.4
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+.++..++++||||+|+||++++++|+++|++|++++|+... ......+. ..++.++.+|++|++++.+.+
T Consensus 1 ~~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 74 (258)
T PRK08628 1 MDLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPD------DEFAEELRALQPRAEFVQVDLTDDAQCRDAV 74 (258)
T ss_pred CCCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhh------HHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 6777888899999999999999999999999999999987531 12222221 235788999999999988876
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 75 ~~ 76 (258)
T PRK08628 75 EQ 76 (258)
T ss_pred HH
Confidence 44
No 49
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.20 E-value=1.5e-10 Score=79.07 Aligned_cols=66 Identities=14% Similarity=0.077 Sum_probs=51.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++++||||+|+||++++++|+++|++|+++.|+. +....+......++.++++|++|.+++.+.+.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 68 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRP------DALDDLKARYGDRLWVLQLDVTDSAAVRAVVD 68 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHhccCceEEEEccCCCHHHHHHHHH
Confidence 6799999999999999999999999999999864 22222222112368899999999998888653
No 50
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.20 E-value=4.6e-11 Score=80.82 Aligned_cols=61 Identities=20% Similarity=0.245 Sum_probs=52.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+|||||||+|++++++|+++||+|++++|+.. +... +. .++++..+|+.++..+...+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~------~~~~---~~-~~v~~~~~d~~~~~~l~~a~ 61 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPE------AAAA---LA-GGVEVVLGDLRDPKSLVAGA 61 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHH------HHHh---hc-CCcEEEEeccCCHhHHHHHh
Confidence 57999999999999999999999999999999853 2222 22 58999999999999988875
No 51
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.20 E-value=8.4e-11 Score=78.86 Aligned_cols=63 Identities=22% Similarity=0.323 Sum_probs=51.3
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+|+||||.+|+++++.|++.+++|++++|+.+ ......++..+++++++|+.|++++.+++.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~-------~~~~~~l~~~g~~vv~~d~~~~~~l~~al~ 63 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPS-------SDRAQQLQALGAEVVEADYDDPESLVAALK 63 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSH-------HHHHHHHHHTTTEEEES-TT-HHHHHHHHT
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccc-------hhhhhhhhcccceEeecccCCHHHHHHHHc
Confidence 799999999999999999999999999999852 122234455689999999999999999873
No 52
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.19 E-value=1e-10 Score=82.51 Aligned_cols=70 Identities=17% Similarity=0.126 Sum_probs=47.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+++|+|||||||||+++++.|+++|++++++.++.... . ....+... ....+.++.+|++|.+.+.+.+.
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 71 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYA--G-NLMSLAPVAQSERFAFEKVDICDRAELARVFT 71 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccc--c-chhhhhhcccCCceEEEECCCcChHHHHHHHh
Confidence 36899999999999999999999998866544332111 0 01111111 12357889999999998888753
No 53
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.19 E-value=1.7e-10 Score=78.32 Aligned_cols=74 Identities=9% Similarity=-0.006 Sum_probs=58.6
Q ss_pred CCCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|++..+.++||||+ +-||..++++|+++|++|++..|+.. ....+..+....+.++++|++|++++++.+
T Consensus 1 ~~~~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 74 (252)
T PRK06079 1 MSGILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDR------MKKSLQKLVDEEDLLVECDVASDESIERAF 74 (252)
T ss_pred CccccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchH------HHHHHHhhccCceeEEeCCCCCHHHHHHHH
Confidence 8899999999999999 79999999999999999999988621 112223333335788999999999998875
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 75 ~~ 76 (252)
T PRK06079 75 AT 76 (252)
T ss_pred HH
Confidence 43
No 54
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.19 E-value=8.3e-11 Score=86.41 Aligned_cols=62 Identities=16% Similarity=0.296 Sum_probs=44.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~ 71 (91)
..|+|+|||||||||++|+++|+++|++|++++|..... .. .....+...+++++.+|+.++
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~--~~--~~~~~~~~~~~~~i~~D~~~~ 179 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGR--KE--NVMHHFSNPNFELIRHDVVEP 179 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccc--hh--hhhhhccCCceEEEECCccCh
Confidence 457999999999999999999999999999998754321 11 111112233567777777654
No 55
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.19 E-value=2.5e-10 Score=77.71 Aligned_cols=73 Identities=11% Similarity=0.112 Sum_probs=55.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGR 83 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~ 83 (91)
++.++++||||+|+||++++++|+++|++|++++|+... .......+ ...+.++.+|++|++.+.+.+.....
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~ 76 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADN-----GAAVAASL-GERARFIATDITDDAAIERAVATVVA 76 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHh-CCeeEEEEecCCCHHHHHHHHHHHHH
Confidence 556899999999999999999999999999999997421 11111222 23578899999999999887644333
No 56
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.18 E-value=1.1e-10 Score=78.18 Aligned_cols=70 Identities=10% Similarity=0.079 Sum_probs=53.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++++||||+|+||.+++++|+++|++|++++|+.... ......+. ...+.++++|+.|++.+.+.+..
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAA-----ERVAAEILAGGRAIAVAADVSDEADVEAAVAA 74 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 457899999999999999999999999999999975221 11112221 23578999999999999887543
No 57
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.18 E-value=4.5e-11 Score=83.15 Aligned_cols=61 Identities=23% Similarity=0.337 Sum_probs=47.5
Q ss_pred EEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCC-eEEEEeeCCChhhhhHHH
Q 037506 11 LIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIG-VTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 11 lItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~-v~~v~gDl~d~~~l~~~~ 78 (91)
|||||+||+|++|+++|+++| ++|+++++..... ... .+...+ .+++++|++|++.+.+++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~----~~~---~~~~~~~~~~~~~Di~d~~~l~~a~ 64 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPK----FLK---DLQKSGVKEYIQGDITDPESLEEAL 64 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccc----cch---hhhcccceeEEEeccccHHHHHHHh
Confidence 699999999999999999999 7999999875322 111 122223 349999999999999985
No 58
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.18 E-value=9.5e-11 Score=79.63 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=56.3
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~ 76 (91)
|.+.+..++++||||+++||++++++|+++|++|++..|+.. +... ....+. ...+.++.+|++|++++++
T Consensus 2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~ 76 (260)
T PRK08416 2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNV-----EEANKIAEDLEQKYGIKAKAYPLNILEPETYKE 76 (260)
T ss_pred cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCH-----HHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHH
Confidence 456677789999999999999999999999999988876431 1211 111221 2357889999999999988
Q ss_pred HHhhh
Q 037506 77 QRMRS 81 (91)
Q Consensus 77 ~~~~~ 81 (91)
.+...
T Consensus 77 ~~~~~ 81 (260)
T PRK08416 77 LFKKI 81 (260)
T ss_pred HHHHH
Confidence 76443
No 59
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.18 E-value=7.7e-11 Score=81.07 Aligned_cols=60 Identities=18% Similarity=0.268 Sum_probs=46.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
|+|||||||||||++|+++|+++||+|++++|..... . ... .+++++.+|++|.+.+...
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~--~-------~~~-~~~~~~~~d~~~~~~~~~~ 60 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGL--D-------PLL-SGVEFVVLDLTDRDLVDEL 60 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccc--c-------ccc-cccceeeecccchHHHHHH
Confidence 3599999999999999999999999999999975432 0 001 3678888998887555543
No 60
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.8e-10 Score=76.80 Aligned_cols=70 Identities=17% Similarity=0.079 Sum_probs=53.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++|+||||+|++|++++++|+++|++|++++|+... .......+.. ..++++++|+.|++.+.+.+..
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKE-----LEEAAAELNNKGNVLGLAADVRDEADVQRAVDA 75 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHH-----HHHHHHHHhccCcEEEEEccCCCHHHHHHHHHH
Confidence 45789999999999999999999999999999996421 1111122221 4688999999999988887543
No 61
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.18 E-value=1.8e-10 Score=77.91 Aligned_cols=66 Identities=17% Similarity=0.163 Sum_probs=53.8
Q ss_pred CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+.++..++++||||+|+||++++++|.++|++|++++|+.... . ...+.++++|+.|++.+.+.+.
T Consensus 4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~~~~~~~~~ 69 (260)
T PRK06523 4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----------L-PEGVEFVAADLTTAEGCAAVAR 69 (260)
T ss_pred CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----------c-CCceeEEecCCCCHHHHHHHHH
Confidence 4456778999999999999999999999999999999974210 1 2257889999999998887653
No 62
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.18 E-value=2.1e-10 Score=77.35 Aligned_cols=66 Identities=17% Similarity=0.166 Sum_probs=51.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+|+||||||+||.++++.|+++|++|++++|+. ++...+.......+.++.+|+.|.+++...+.
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~ 66 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQ------ERLQELKDELGDNLYIAQLDVRNRAAIEEMLA 66 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhccceEEEEecCCCHHHHHHHHH
Confidence 5799999999999999999999999999999964 22222222112367889999999998887654
No 63
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.17 E-value=2.4e-10 Score=77.36 Aligned_cols=75 Identities=11% Similarity=0.059 Sum_probs=57.0
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~ 76 (91)
|.+.+..++++||||+|+||.+++++|+++|++|++++|+... .......+. ...+.++++|++|++.+.+
T Consensus 1 ~~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~ 75 (260)
T PRK07063 1 MMNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAAL-----AERAAAAIARDVAGARVLAVPADVTDAASVAA 75 (260)
T ss_pred CCcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhccCCceEEEEEccCCCHHHHHH
Confidence 5566778899999999999999999999999999999996421 111112222 2347789999999998888
Q ss_pred HHhh
Q 037506 77 QRMR 80 (91)
Q Consensus 77 ~~~~ 80 (91)
.+..
T Consensus 76 ~~~~ 79 (260)
T PRK07063 76 AVAA 79 (260)
T ss_pred HHHH
Confidence 7643
No 64
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.17 E-value=1.7e-10 Score=77.12 Aligned_cols=74 Identities=19% Similarity=0.151 Sum_probs=55.1
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|..++..++++||||+|+||++++++|+++|++|++++|+.... .+....+. ...+.++.+|++|++++.+++
T Consensus 1 ~~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 75 (239)
T PRK07666 1 MAQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-----KAVAEEVEAYGVKVVIATADVSDYEEVTAAI 75 (239)
T ss_pred CCccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCeEEEEECCCCCHHHHHHHH
Confidence 33445567899999999999999999999999999999974211 11111222 235788999999999988875
Q ss_pred h
Q 037506 79 M 79 (91)
Q Consensus 79 ~ 79 (91)
.
T Consensus 76 ~ 76 (239)
T PRK07666 76 E 76 (239)
T ss_pred H
Confidence 4
No 65
>PRK05717 oxidoreductase; Validated
Probab=99.17 E-value=3.2e-10 Score=76.69 Aligned_cols=68 Identities=10% Similarity=0.044 Sum_probs=51.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++++||||+|+||++++++|+++|++|++++|+... .......+ ...+.++.+|++|++.+.+++..
T Consensus 10 ~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~-----~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~ 77 (255)
T PRK05717 10 GRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRER-----GSKVAKAL-GENAWFIAMDVADEAQVAAGVAE 77 (255)
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHc-CCceEEEEccCCCHHHHHHHHHH
Confidence 4789999999999999999999999999999886421 11111122 23578899999999988776543
No 66
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.17 E-value=2.8e-10 Score=75.47 Aligned_cols=62 Identities=21% Similarity=0.282 Sum_probs=49.7
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+|||||||||++++++|+++|+.|+.+.|..... .. ... ..+++++.+|+.|.+.+.+.+.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~-----~~--~~~-~~~~~~~~~dl~~~~~~~~~~~ 62 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSE-----SF--EEK-KLNVEFVIGDLTDKEQLEKLLE 62 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGG-----HH--HHH-HTTEEEEESETTSHHHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccc-----cc--ccc-cceEEEEEeecccccccccccc
Confidence 79999999999999999999999999999875321 11 111 1278999999999999988763
No 67
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3.2e-10 Score=75.90 Aligned_cols=68 Identities=19% Similarity=0.213 Sum_probs=51.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
++..++++||||+|+||++++++|+++|++|++++|+.. ... ....+ ...+.++++|+.|.+.+.+.+
T Consensus 3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~ 71 (249)
T PRK06500 3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPA------SLEAARAEL-GESALVIRADAGDVAAQKALA 71 (249)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHH------HHHHHHHHh-CCceEEEEecCCCHHHHHHHH
Confidence 345678999999999999999999999999999988632 111 11122 235778999999988877654
No 68
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.16 E-value=3.1e-10 Score=77.45 Aligned_cols=73 Identities=14% Similarity=0.069 Sum_probs=54.6
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHH
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~ 78 (91)
-+|..++++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|+.|++.+.+.+
T Consensus 3 ~~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~ 77 (276)
T PRK05875 3 LSFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKL-----AAAAEEIEALKGAGAVRYEPADVTDEDQVARAV 77 (276)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhccCCCceEEEEcCCCCHHHHHHHH
Confidence 346678999999999999999999999999999999864211 11112221 135788899999999888765
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 78 ~~ 79 (276)
T PRK05875 78 DA 79 (276)
T ss_pred HH
Confidence 43
No 69
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.15 E-value=3.4e-10 Score=77.44 Aligned_cols=69 Identities=14% Similarity=0.058 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.+.|+||||+|+||++++++|+++|++|++++|+.. ....+.......+.++++|++|++.+.+.+..
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 70 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTA------TLADLAEKYGDRLLPLALDVTDRAAVFAAVET 70 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHhccCCeeEEEccCCCHHHHHHHHHH
Confidence 3468999999999999999999999999999999742 22211111123578889999999998876543
No 70
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.15 E-value=1.9e-10 Score=84.40 Aligned_cols=36 Identities=19% Similarity=0.473 Sum_probs=33.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..|+|+|||||||||++|+++|+++||+|++++|..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~ 154 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFF 154 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 347999999999999999999999999999999864
No 71
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.15 E-value=2.6e-10 Score=77.23 Aligned_cols=66 Identities=11% Similarity=-0.050 Sum_probs=51.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++++||||||+||++++++|+++|++|++++|+.. ..+.+ ..+....+.++.+|++|.+.+.+.+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 67 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEA------GLAALAAELGAGNAWTGALDVTDRAAWDAAL 67 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHH------HHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence 367999999999999999999999999999998642 22111 2222346889999999999888765
No 72
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.14 E-value=1.6e-10 Score=88.26 Aligned_cols=63 Identities=10% Similarity=0.163 Sum_probs=47.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhh-hhHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQV-TSSQ 77 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~-l~~~ 77 (91)
+|+|+|||||||||++|+++|+++ ||+|++++|..... . ......+++++.+|++|... +.++
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~------~--~~~~~~~~~~~~gDl~d~~~~l~~~ 379 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAI------S--RFLGHPRFHFVEGDISIHSEWIEYH 379 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhh------h--hhcCCCceEEEeccccCcHHHHHHH
Confidence 468999999999999999999986 79999999975321 1 11122368999999998654 4443
No 73
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.14 E-value=2.2e-10 Score=78.31 Aligned_cols=72 Identities=8% Similarity=0.029 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++.++||||+|++|+++++.|+++|++|++++|+.... .+......... ...+.++.+|++|++.+.+ +..
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~ 74 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQ--ENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQL 74 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHH--HHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHH
Confidence 456799999999999999999999999999999874211 00001111111 2357899999999998876 433
No 74
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.14 E-value=2.3e-10 Score=77.69 Aligned_cols=72 Identities=10% Similarity=0.059 Sum_probs=53.9
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.+..+.++||||+++||.+++++|+++|++|++++|+.... ......+. ...+.++.+|++|++++.+.+.
T Consensus 5 ~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T PRK07062 5 QLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERL-----ASAEARLREKFPGARLLAARCDVLDEADVAAFAA 79 (265)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHH
Confidence 45567899999999999999999999999999999974221 11111111 1256788999999999988754
Q ss_pred h
Q 037506 80 R 80 (91)
Q Consensus 80 ~ 80 (91)
.
T Consensus 80 ~ 80 (265)
T PRK07062 80 A 80 (265)
T ss_pred H
Confidence 3
No 75
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.14 E-value=3.6e-10 Score=75.64 Aligned_cols=74 Identities=14% Similarity=0.071 Sum_probs=55.5
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|...+..++++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|++|++++.+.+
T Consensus 1 ~~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 75 (250)
T PRK12939 1 MASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEA-----RELAAALEAAGGRAHAIAADLADPASVQRFF 75 (250)
T ss_pred CCCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 44456678999999999999999999999999999998864211 11112222 235788999999999988865
Q ss_pred h
Q 037506 79 M 79 (91)
Q Consensus 79 ~ 79 (91)
.
T Consensus 76 ~ 76 (250)
T PRK12939 76 D 76 (250)
T ss_pred H
Confidence 3
No 76
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.14 E-value=2.3e-10 Score=77.82 Aligned_cols=71 Identities=15% Similarity=0.163 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||.+++++|+++|++|++++|+.... ......+. ..++.++.+|++|++.+.+.+..
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-----DEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQ 80 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 4467899999999999999999999999999999974211 11112221 23578899999999998876543
No 77
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.13 E-value=5.6e-10 Score=74.91 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=53.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
.++++||||+|+||+++++.|+++|++|++..++.. .+...+ ..+ ...+.++++|+.|++.+.+++......+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 78 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSE-----DAAEALADEL-GDRAIALQADVTDREQVQAMFATATEHF 78 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCH-----HHHHHHHHHh-CCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 468999999999999999999999999988766431 122111 112 2367889999999999888764444444
Q ss_pred h
Q 037506 86 G 86 (91)
Q Consensus 86 ~ 86 (91)
|
T Consensus 79 g 79 (253)
T PRK08642 79 G 79 (253)
T ss_pred C
Confidence 4
No 78
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.13 E-value=5.4e-10 Score=75.86 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=54.7
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++..++++||||+|+||++++++|+++|++|++++|+. ++.+.+.......+.++++|++|++.+.+.+...
T Consensus 3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (263)
T PRK06200 3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSA------EKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQT 74 (263)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHH
Confidence 35567899999999999999999999999999999864 2222221111235788999999999888876443
No 79
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.13 E-value=4.4e-10 Score=75.63 Aligned_cols=71 Identities=17% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++.++||||+|+||++++++|+++|++|++++|.... ........+. ..++.++++|++|++.+.+.+.+.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDE----ELAATQQELRALGVEVIFFPADVADLSAHEAMLDAA 74 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchh----HHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3679999999999999999999999999999986421 1111112221 235789999999999888865433
No 80
>PLN02253 xanthoxin dehydrogenase
Probab=99.13 E-value=4.7e-10 Score=76.76 Aligned_cols=71 Identities=13% Similarity=0.048 Sum_probs=53.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|.... .......+. ..++.++++|++|++.+.+++..
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 87 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDL-----GQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDF 87 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHhcCCCceEEEEeecCCHHHHHHHHHH
Confidence 456789999999999999999999999999999986421 111112222 23578999999999999887543
No 81
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.13 E-value=5.6e-10 Score=75.48 Aligned_cols=70 Identities=9% Similarity=0.023 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
...++++||||+|+||++++++|+++|++|++++|+... .......+ ...+.++.+|++|++.+.+.+..
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~ 73 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPAR-----ARLAALEI-GPAAIAVSLDVTRQDSIDRIVAA 73 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHh-CCceEEEEccCCCHHHHHHHHHH
Confidence 345789999999999999999999999999999987421 11111222 23578899999999999887644
No 82
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.13 E-value=6.9e-10 Score=74.03 Aligned_cols=70 Identities=19% Similarity=0.131 Sum_probs=52.7
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+++.++++||||+|+||++++++|+++|+.|.+..|+. ++.+.+.......+.++.+|+.|.+.+.+.+.
T Consensus 3 ~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (245)
T PRK12936 3 DLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRV------EKLEALAAELGERVKIFPANLSDRDEVKALGQ 72 (245)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHhCCceEEEEccCCCHHHHHHHHH
Confidence 35568999999999999999999999999888887753 22221111112357889999999999888653
No 83
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.13 E-value=4.1e-10 Score=75.88 Aligned_cols=76 Identities=14% Similarity=0.090 Sum_probs=56.2
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|...+..++++||||+|+||.+++++|.++|++|++++|+.... ......+. ...+.++.+|++|.+.+.+.+
T Consensus 1 m~~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~ 75 (253)
T PRK06172 1 MSMTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGG-----EETVALIREAGGEALFVACDVTRDAEVKALV 75 (253)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 44445568999999999999999999999999999999974221 11111221 235788999999999888865
Q ss_pred hhh
Q 037506 79 MRS 81 (91)
Q Consensus 79 ~~~ 81 (91)
...
T Consensus 76 ~~~ 78 (253)
T PRK06172 76 EQT 78 (253)
T ss_pred HHH
Confidence 443
No 84
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.12 E-value=4.1e-10 Score=74.92 Aligned_cols=69 Identities=10% Similarity=0.112 Sum_probs=51.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..++++||||||++|+++++.|+++|++|+++.|+.... .......+. ...+.++++|++|++.+.+.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~ 74 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAG----AEALVAEIGALGGKALAVQGDVSDAESVERAV 74 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 457899999999999999999999999998888864211 111112221 235788899999999887764
No 85
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.12 E-value=5e-10 Score=77.14 Aligned_cols=72 Identities=8% Similarity=-0.031 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..+.++||||+|+||++++++|.++|++|++.+|+... .......+.. ..+.++.+|++|++++.+.+...
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~-----l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 77 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPG-----LRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEA 77 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 556789999999999999999999999999999987421 1112222322 24678899999999998875443
No 86
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.12 E-value=4e-10 Score=76.37 Aligned_cols=67 Identities=13% Similarity=0.151 Sum_probs=51.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCC-CeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGI-GVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~-~v~~v~gDl~d~~~l~~~~~ 79 (91)
+++++||||+|+||.++++.|+++|++|++++|+.. +... ...+... .+.++.+|++|++++.+.+.
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~ 70 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTD------ALQAFAARLPKAARVSVYAADVRDADALAAAAA 70 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHH
Confidence 468999999999999999999999999999998742 2211 1222211 57889999999999888653
No 87
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.12 E-value=5.3e-10 Score=75.52 Aligned_cols=71 Identities=10% Similarity=0.124 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+... .......+.. ..+.++.+|+.|++.+.+.+..
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~ 80 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAK-----LAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDA 80 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHH
Confidence 456799999999999999999999999999999987421 1111122222 2477889999999998887543
No 88
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.12 E-value=3.1e-10 Score=74.97 Aligned_cols=64 Identities=17% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+++||||+|++|+++++.|+++ ++|++++|+.. +...+.. ...+++++++|+.|++.+.+.+
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~------~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~ 66 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAE------RLDELAA-ELPGATPFPVDLTDPEAIAAAV 66 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHH------HHHHHHH-HhccceEEecCCCCHHHHHHHH
Confidence 578999999999999999999999 99999999642 2211111 1125789999999999888865
No 89
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.12 E-value=4.8e-10 Score=76.06 Aligned_cols=65 Identities=20% Similarity=0.223 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh-hhhhHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG-QVTSSQ 77 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~-~~l~~~ 77 (91)
.+|+|+||||||+||++++++|+++||+|++++|+.. +...... ...+++++++|++|. +.+.+.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~------~~~~~~~-~~~~~~~~~~Dl~d~~~~l~~~ 81 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVD------KAKTSLP-QDPSLQIVRADVTEGSDKLVEA 81 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHH------HHHHhcc-cCCceEEEEeeCCCCHHHHHHH
Confidence 4578999999999999999999999999999999742 1111111 123689999999983 555554
No 90
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.12 E-value=1.8e-10 Score=80.08 Aligned_cols=69 Identities=14% Similarity=0.094 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..++|+||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|+.|.+.+.+++.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 87 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKG-----KAAAARITAATPGADVTLQELDLTSLASVRAAAD 87 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHH
Confidence 457899999999999999999999999999999974211 11111121 2357889999999999888653
No 91
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.11 E-value=5.6e-10 Score=76.65 Aligned_cols=64 Identities=19% Similarity=0.229 Sum_probs=52.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+++++||||+|+||++++++|.++|++|++++|+. ++.. .+...+++++.+|++|++++...+.
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~------~~~~---~l~~~~~~~~~~Dl~d~~~~~~~~~ 67 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKE------EDVA---ALEAEGLEAFQLDYAEPESIAALVA 67 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH------HHHH---HHHHCCceEEEccCCCHHHHHHHHH
Confidence 46799999999999999999999999999999964 2222 2223468899999999998888653
No 92
>PRK09186 flagellin modification protein A; Provisional
Probab=99.11 E-value=3.4e-10 Score=76.17 Aligned_cols=69 Identities=16% Similarity=0.128 Sum_probs=51.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..++++||||+|+||+++++.|+++|++|+++.|+.... ......+ ....+.++.+|++|++.+.+++.
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 75 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEAL-----NELLESLGKEFKSKKLSLVELDITDQESLEEFLS 75 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHH-----HHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHH
Confidence 457899999999999999999999999999998864211 1111112 12245678999999999888754
No 93
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.11 E-value=3e-10 Score=76.19 Aligned_cols=66 Identities=15% Similarity=0.059 Sum_probs=50.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
++++||||+|++|++++++|+++|++|++++|+.... ......+. ...+.++++|+.|++++.+.+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 69 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGA-----EAAAKVATDAGGSVIYLVADVTKEDEIADMI 69 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEECCCCCHHHHHHHH
Confidence 5799999999999999999999999999999974211 11111111 235788999999999887754
No 94
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.11 E-value=3.8e-10 Score=76.39 Aligned_cols=71 Identities=18% Similarity=0.148 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||+++++.|+++|++|++++|+... .......+. ...+.++++|++|++.+.+.+..
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~ 82 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEE-----LEEAAAHLEALGIDALWIAADVADEADIERLAEE 82 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHH
Confidence 345789999999999999999999999999999986421 111112222 23567899999999999776543
No 95
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.11 E-value=4.4e-10 Score=75.39 Aligned_cols=72 Identities=11% Similarity=0.088 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||++++++|+++|++|++++|..... ......+. ...+.++.+|++|.+++.+.....
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 77 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGA-----ERVAKQIVADGGTAIAVQVDVSDPDSAKAMADAT 77 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999974211 11112221 224678899999999888765443
No 96
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.11 E-value=7.1e-10 Score=74.85 Aligned_cols=68 Identities=7% Similarity=0.100 Sum_probs=52.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++++||||+|+||++++++|+++|++|++++|+... .......+....+.++.+|+.|.+.+.+.+..
T Consensus 3 k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 70 (257)
T PRK07074 3 RTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAA-----LAAFADALGDARFVPVACDLTDAASLAAALAN 70 (257)
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 579999999999999999999999999999986421 11112223334678999999999998876644
No 97
>PRK06398 aldose dehydrogenase; Validated
Probab=99.10 E-value=7.8e-10 Score=75.24 Aligned_cols=63 Identities=13% Similarity=0.045 Sum_probs=52.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++.++++||||+|+||++++++|.++|++|++++|+... ...+.++++|++|++.+.+++..
T Consensus 3 ~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~--------------~~~~~~~~~D~~~~~~i~~~~~~ 65 (258)
T PRK06398 3 GLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPS--------------YNDVDYFKVDVSNKEQVIKGIDY 65 (258)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccc--------------cCceEEEEccCCCHHHHHHHHHH
Confidence 3566899999999999999999999999999999986421 11578899999999998887644
No 98
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.10 E-value=4.9e-10 Score=76.46 Aligned_cols=76 Identities=14% Similarity=0.043 Sum_probs=55.6
Q ss_pred CCCCCC--CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhH
Q 037506 1 MEGKNT--KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 1 ~~~~~~--~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~ 76 (91)
|++.|. .++++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|++|++++.+
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~ 75 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKV-----DAAVAQLQQAGPEGLGVSADVRDYAAVEA 75 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHHhCCceEEEECCCCCHHHHHH
Confidence 455544 46899999999999999999999999999999874211 11111221 2346788999999999888
Q ss_pred HHhhh
Q 037506 77 QRMRS 81 (91)
Q Consensus 77 ~~~~~ 81 (91)
.+...
T Consensus 76 ~~~~~ 80 (264)
T PRK07576 76 AFAQI 80 (264)
T ss_pred HHHHH
Confidence 76443
No 99
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.10 E-value=9.4e-10 Score=74.49 Aligned_cols=71 Identities=17% Similarity=0.115 Sum_probs=54.1
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++..++++||||+|+||++++++|+++|++|++++|+.. .......+. ...+.++.+|+.|++.+.+.+..
T Consensus 3 ~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 75 (263)
T PRK08226 3 KLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE------IEKLADELCGRGHRCTAVVADVRDPASVAAAIKR 75 (263)
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH------HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHH
Confidence 456789999999999999999999999999999998642 111112221 23577899999999998887543
No 100
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.09 E-value=6.6e-10 Score=74.72 Aligned_cols=65 Identities=17% Similarity=0.096 Sum_probs=51.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++++||||+|+||.+++++|+++|++|++++|+. ++.+.+... ...+.++.+|++|++.+++.+.
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~------~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 66 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQ------SVLDELHTQ-SANIFTLAFDVTDHPGTKAALS 66 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCH------HHHHHHHHh-cCCCeEEEeeCCCHHHHHHHHH
Confidence 5799999999999999999999999999999963 222222211 2357889999999999988753
No 101
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.09 E-value=5.1e-10 Score=74.91 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=52.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.+++++||||+|++|++++++|+++|++|++++|+... .......+. ..++.++.+|++|++.+.+.+.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 75 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDA-----LEALAAELRSTGVKAAAYSIDLSNPEAIAPGIA 75 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHH
Confidence 35689999999999999999999999999999997421 111111111 2357889999999998887654
No 102
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.09 E-value=9.6e-10 Score=73.77 Aligned_cols=70 Identities=10% Similarity=0.008 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+|+||++++++|+++|++|++++|+.. ......+... ...+.++++|++|++.+...+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~ 72 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP----SETQQQVEAL-GRRFLSLTADLSDIEAIKALVD 72 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH----HHHHHHHHhc-CCceEEEECCCCCHHHHHHHHH
Confidence 45678999999999999999999999999999998631 1111111211 2357899999999999987653
No 103
>PRK07985 oxidoreductase; Provisional
Probab=99.09 E-value=8e-10 Score=76.82 Aligned_cols=73 Identities=16% Similarity=0.168 Sum_probs=52.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhh-hhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHK-EFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~-~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||++++++|+++|++|++..|+... +..+.+. .+. ...+.++.+|++|++.+.+.+...
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 122 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEE----EDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEA 122 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcch----hhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 445789999999999999999999999999988765321 1111111 111 224678899999999888875443
No 104
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.09 E-value=6.2e-10 Score=78.46 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=47.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+|+|||||||||++++++|+++|++ |+.++|..... .......+. ...++++.+|++|.+.+.+++.
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 70 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAG----NLESLADVSDSERYVFEHADICDRAELDRIFA 70 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccc----hHHHHHhcccCCceEEEEecCCCHHHHHHHHH
Confidence 47999999999999999999999976 55555532111 111111111 2357889999999998888753
No 105
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.09 E-value=9.4e-10 Score=74.38 Aligned_cols=71 Identities=11% Similarity=0.033 Sum_probs=53.9
Q ss_pred CCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 2 EGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 2 ~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..+..++|+||||+|+||.+++++|+++|++|++++|+... .......+ ...++++|++|++.+.+.+..
T Consensus 2 ~~~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~ 72 (255)
T PRK06057 2 SQRLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEA-----GKAAADEV---GGLFVPTDVTDEDAVNALFDT 72 (255)
T ss_pred CccCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHc---CCcEEEeeCCCHHHHHHHHHH
Confidence 456777899999999999999999999999999999986421 11111112 236889999999988887543
No 106
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.09 E-value=4.8e-10 Score=75.21 Aligned_cols=69 Identities=10% Similarity=0.061 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..++++||||+|+||++++++|+++|++|+++.|+.... ......+ ....+.++++|++|++++.+.+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAA-----ERVAAAIAAGGRAFARQGDVGSAEAVEALVD 73 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHH-----HHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 456899999999999999999999999999999874211 1111112 12357889999999999988653
No 107
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.09 E-value=6.7e-10 Score=75.89 Aligned_cols=63 Identities=21% Similarity=0.294 Sum_probs=50.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++++||||+|+||++++++|.++|++|++++|+. ++.. .+...++.++.+|+.|++.+.+.+
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~------~~~~---~~~~~~~~~~~~Dl~~~~~~~~~~ 63 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKA------EDVE---ALAAAGFTAVQLDVNDGAALARLA 63 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCH------HHHH---HHHHCCCeEEEeeCCCHHHHHHHH
Confidence 36899999999999999999999999999999864 1221 122236788999999999888765
No 108
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.09 E-value=8.5e-10 Score=74.79 Aligned_cols=77 Identities=14% Similarity=0.062 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS 84 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~ 84 (91)
+..++++||||++.||++++++|+++|++|+++.|... +.....+... ...+.++.+|++|++.+.+.+...-..
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 80 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA----PETQAQVEAL-GRKFHFITADLIQQKDIDSIVSQAVEV 80 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH----HHHHHHHHHc-CCeEEEEEeCCCCHHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999887531 1111111211 235788999999999998876544333
Q ss_pred hh
Q 037506 85 LG 86 (91)
Q Consensus 85 ~~ 86 (91)
+|
T Consensus 81 ~g 82 (251)
T PRK12481 81 MG 82 (251)
T ss_pred cC
Confidence 44
No 109
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.08 E-value=5.9e-10 Score=74.66 Aligned_cols=68 Identities=10% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+++++||||+|+||++++++|+++|++|++++|+... .......+. ...+.++++|+.|.+.+++.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 71 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREA-----AEKVAADIRAKGGNAQAFACDITDRDSVDTAV 71 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-----HHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHH
Confidence 35789999999999999999999999999999986421 111111121 235889999999999888865
No 110
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.08 E-value=5.6e-10 Score=78.15 Aligned_cols=70 Identities=19% Similarity=0.131 Sum_probs=53.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+.+++++||||+|+||.+++++|+++|++|++++|+.... ......+. ...+.++.+|++|.+++++++.
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 75 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKA-----EAAAQELGIPPDSYTIIHIDLGDLDSVRRFVD 75 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHHhhccCCceEEEEecCCCHHHHHHHHH
Confidence 3567899999999999999999999999999999864211 11112221 2357889999999999988753
No 111
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.08 E-value=6.6e-10 Score=84.69 Aligned_cols=70 Identities=9% Similarity=0.078 Sum_probs=50.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
...|+|||||||||||++++++|+++ +++|++++|..... ....+.. ....+++++.+|++|.+.+.+.+
T Consensus 4 ~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~----~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~ 76 (668)
T PLN02260 4 YEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCS----NLKNLNPSKSSPNFKFVKGDIASADLVNYLL 76 (668)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccc----hhhhhhhcccCCCeEEEECCCCChHHHHHHH
Confidence 34689999999999999999999997 68999998753111 1111111 11246899999999988777654
No 112
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.08 E-value=1.1e-09 Score=74.15 Aligned_cols=72 Identities=13% Similarity=0.096 Sum_probs=53.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||.+++++|++.|++|+++.|+. . .+... ..... ...+.++++|++|.+.+.+.+...
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~---~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~ 85 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-N---WDETRRLIEKE-GRKVTFVQVDLTKPESAEKVVKEA 85 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-H---HHHHHHHHHhc-CCceEEEEcCCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999862 1 11111 11111 235789999999999888875433
No 113
>PRK06196 oxidoreductase; Provisional
Probab=99.07 E-value=8.1e-10 Score=77.24 Aligned_cols=67 Identities=16% Similarity=0.102 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++|+||||+|+||++++++|+++|++|++++|+.. +.. ....+. .+.++++|++|.+++++++.
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~------~~~~~~~~l~--~v~~~~~Dl~d~~~v~~~~~ 91 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPD------VAREALAGID--GVEVVMLDLADLESVRAFAE 91 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhh--hCeEEEccCCCHHHHHHHHH
Confidence 34578999999999999999999999999999999742 221 112222 47899999999999888753
No 114
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.07 E-value=5.5e-10 Score=76.81 Aligned_cols=66 Identities=14% Similarity=0.246 Sum_probs=48.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+|||||||||++++++|++++ ++|++++|..... ..+.. ..+ ...+++++.+|++|++.+.+++
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~Dl~~~~~~~~~~ 69 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAG-NLENL---ADLEDNPRYRFVKGDIGDRELVSRLF 69 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcch-hhhhh---hhhccCCCcEEEEcCCcCHHHHHHHH
Confidence 58999999999999999999987 7898888743211 01111 111 1236789999999999988764
No 115
>PRK06128 oxidoreductase; Provisional
Probab=99.07 E-value=9.5e-10 Score=76.41 Aligned_cols=80 Identities=18% Similarity=0.161 Sum_probs=56.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++..++++||||+|+||++++++|+++|++|++..|+.... ........+. ...+.++.+|++|++.+.+++.+.
T Consensus 52 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~ 128 (300)
T PRK06128 52 RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQ---DAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERA 128 (300)
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchH---HHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHH
Confidence 35568999999999999999999999999998877653211 1111111222 234678999999999998876554
Q ss_pred hhhhh
Q 037506 82 GRSLG 86 (91)
Q Consensus 82 ~~~~~ 86 (91)
-..+|
T Consensus 129 ~~~~g 133 (300)
T PRK06128 129 VKELG 133 (300)
T ss_pred HHHhC
Confidence 44444
No 116
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.07 E-value=9e-10 Score=73.47 Aligned_cols=71 Identities=10% Similarity=0.121 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.+++++||||||+||.+++++|+++|++|+++ .|+.... ......+. ...+.++.+|++|++.+.+.+..
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAA-----QELLEEIKEEGGDAIAVKADVSSEEDVENLVEQ 76 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 345689999999999999999999999999998 7764211 11111121 23578899999999998886543
No 117
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.07 E-value=1.7e-09 Score=72.80 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..++++||||+|+||++++++|+++|++|++++|+.. .......+....+.++.+|++|++.+.+.+.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~------~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 81 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSED------VAEVAAQLLGGNAKGLVCDVSDSQSVEAAVA 81 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHhhCCceEEEEecCCCHHHHHHHHH
Confidence 4578999999999999999999999999999998642 1122222333356789999999998888653
No 118
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.07 E-value=3.4e-10 Score=75.08 Aligned_cols=60 Identities=23% Similarity=0.243 Sum_probs=50.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|||.|+||||.+|+++++.++++||+|++++|++++. ..+ +++.+++.|+.|++.+.+.+
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~---------~~~--~~~~i~q~Difd~~~~a~~l 60 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKL---------AAR--QGVTILQKDIFDLTSLASDL 60 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhc---------ccc--ccceeecccccChhhhHhhh
Confidence 6899999999999999999999999999999986432 112 37889999999998876654
No 119
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.7e-09 Score=72.21 Aligned_cols=72 Identities=15% Similarity=0.121 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.+|+++||||+|+||++++++|+++|++|++++|..... .+.... ...+. ...+.++.+|+.|++.+.+.+.
T Consensus 5 ~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 79 (249)
T PRK12827 5 DSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRG--RAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALD 79 (249)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCccccc--HHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 357899999999999999999999999999988754321 122111 11121 2357889999999998887653
No 120
>PRK08264 short chain dehydrogenase; Validated
Probab=99.06 E-value=1e-09 Score=73.26 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+|+||++++++|+++|+ +|++++|+... .. . ...++.++.+|+.|++.+.+.+.
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~------~~---~-~~~~~~~~~~D~~~~~~~~~~~~ 69 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPES------VT---D-LGPRVVPLQLDVTDPASVAAAAE 69 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhh------hh---h-cCCceEEEEecCCCHHHHHHHHH
Confidence 3457899999999999999999999998 99999997521 11 1 22368899999999998887653
No 121
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.06 E-value=8.8e-10 Score=75.55 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=53.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++.++.++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++.+|++|++.+.+.+...
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKC-----EELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQA 81 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHH
Confidence 34557899999999999999999999999999999864211 11111121 125778899999999998876443
No 122
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.4e-09 Score=74.18 Aligned_cols=68 Identities=12% Similarity=-0.124 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||||.||++++++|+++|++|++.+|+. ++.... ..+. .+.++.+|++|++++.+.+..
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~------~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~ 71 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDE------ALAKETAAELG--LVVGGPLDVTDPASFAAFLDA 71 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCH------HHHHHHHHHhc--cceEEEccCCCHHHHHHHHHH
Confidence 3457899999999999999999999999999999864 222211 1221 478899999999998876533
No 123
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.6e-10 Score=74.81 Aligned_cols=66 Identities=12% Similarity=0.123 Sum_probs=50.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-h--cCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-F--QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l--~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++|+||||||+||++++++|+++|++|++++|+.. ....+.. . ...++.++.+|++|++.+.+++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 70 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAP------QVTALRAEAARRGLALRVEKLDLTDAIDRAQAA 70 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh
Confidence 357999999999999999999999999999999642 1111111 1 1235788999999998887764
No 124
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.06 E-value=9.2e-10 Score=74.29 Aligned_cols=70 Identities=14% Similarity=0.093 Sum_probs=52.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++++||||+|.||.+++++|.++|++|++++|+.... ......+. ...+.++.+|+.|++.+.+.+..
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 76 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAEL-----DQLVAEIRAEGGEAVALAGDVRDEAYAKALVAL 76 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 456899999999999999999999999999999874211 11112222 23578899999999988887543
No 125
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.06 E-value=1.6e-09 Score=75.25 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++..++++||||+|+||.+++++|+++|++|+++.|+.... .......+. ...+.++.+|++|.+.+.+.+...
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHED----ANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchH----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 34457899999999999999999999999999998864211 111111222 234778999999999888875443
No 126
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.06 E-value=9.6e-10 Score=77.46 Aligned_cols=68 Identities=12% Similarity=0.171 Sum_probs=52.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|++|||||+||||+++++.++++. ++|++++...... +++.. ..+. .++..|+++|++|.+.+.+.+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAg-n~~~l---~~~~~~~~~~fv~~DI~D~~~v~~~~~ 71 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAG-NLENL---ADVEDSPRYRFVQGDICDRELVDRLFK 71 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccC-CHHHH---HhhhcCCCceEEeccccCHHHHHHHHH
Confidence 579999999999999999999875 5678888865433 33322 3333 3589999999999998888754
No 127
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.06 E-value=6.3e-10 Score=74.66 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++++||||+|+||++++++|+++|++|++++|+.... .+....+.. .....+.++.+|++|++.+.+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 74 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRL--EELKAELLARYPGIKVAVAALDVNDHDQVFEVFAE 74 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH--HHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHH
Confidence 45799999999999999999999999999999974211 000011111 1123578899999999988886544
No 128
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.05 E-value=1e-09 Score=73.67 Aligned_cols=64 Identities=16% Similarity=0.129 Sum_probs=50.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+++||||||+||++++++|+++|++|++++|+... . . .......+.++++|+.|.+++++.+
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~----~-~---~~~~~~~~~~~~~D~~~~~~~~~~~ 64 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP----S-L---AAAAGERLAEVELDLSDAAAAAAWL 64 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch----h-h---hhccCCeEEEEEeccCCHHHHHHHH
Confidence 3589999999999999999999999999999987421 1 1 1111235788999999999988854
No 129
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.05 E-value=1.4e-09 Score=73.79 Aligned_cols=76 Identities=14% Similarity=0.097 Sum_probs=55.6
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|...+..++++||||+|+||.+++++|+++|+.|++..|+... ........+. ...+.++.+|++|.+++.+.+
T Consensus 1 ~~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~ 76 (261)
T PRK08936 1 MYSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEE----EANDVAEEIKKAGGEAIAVKGDVTVESDVVNLI 76 (261)
T ss_pred CccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHH
Confidence 5556777899999999999999999999999999888885321 1111111222 234678899999999888865
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 77 ~~ 78 (261)
T PRK08936 77 QT 78 (261)
T ss_pred HH
Confidence 43
No 130
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.05 E-value=2.6e-09 Score=72.32 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=52.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++++||||+|+||.++++.|+++|++|.++.+..... .+.. .....+. ...+.++++|++|++.+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 82 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAAS--KADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDD 82 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccc--hHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHH
Confidence 457899999999999999999999999988887653221 1111 1112222 23578899999999999887643
No 131
>PRK12320 hypothetical protein; Provisional
Probab=99.05 E-value=6.6e-10 Score=85.59 Aligned_cols=56 Identities=14% Similarity=0.114 Sum_probs=45.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~ 76 (91)
|+|+||||+||||++++++|+++||+|++++|.... ....+++++++|++|+. +.+
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~------------~~~~~ve~v~~Dl~d~~-l~~ 56 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHD------------ALDPRVDYVCASLRNPV-LQE 56 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhh------------cccCCceEEEccCCCHH-HHH
Confidence 489999999999999999999999999999986321 11236788999998874 444
No 132
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.05 E-value=2e-09 Score=72.33 Aligned_cols=64 Identities=9% Similarity=0.030 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+.. . .....+.++++|++|++.+.+.+..
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~-----------~-~~~~~~~~~~~D~~~~~~~~~~~~~ 69 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFL-----------T-QEDYPFATFVLDVSDAAAVAQVCQR 69 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchh-----------h-hcCCceEEEEecCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999998630 1 1123578899999999999887543
No 133
>PRK08643 acetoin reductase; Validated
Probab=99.05 E-value=1.2e-09 Score=73.74 Aligned_cols=69 Identities=10% Similarity=0.043 Sum_probs=52.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.+.++||||+|+||++++++|+++|++|++++|+.... ......+. ...+.++++|++|++.+.+.+..
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 72 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETA-----QAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQ 72 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 35799999999999999999999999999999874211 11112222 23577899999999988886543
No 134
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.04 E-value=3.8e-10 Score=78.63 Aligned_cols=33 Identities=27% Similarity=0.342 Sum_probs=30.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+||||||+||||++++++|+++| +|++++|..
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~ 33 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHS 33 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEecccc
Confidence 589999999999999999999999 799998864
No 135
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.04 E-value=9.3e-10 Score=73.82 Aligned_cols=70 Identities=16% Similarity=0.120 Sum_probs=50.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++++||||+|+||++++++|+++|++|+++ .|+... ..+....+. ...+.++.+|++|++.+.+.+..
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKA-----AEETAEEIEALGRKALAVKANVGDVEKIKEMFAQ 75 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 44689999999999999999999999998774 565311 111112221 23578899999999998887643
No 136
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.5e-09 Score=73.11 Aligned_cols=72 Identities=14% Similarity=0.067 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE-ecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY-ARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~-~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||++++++|+++|++|.++ .|+.. ........+. ...+.++++|++|++++.+++...
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~ 78 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQ-----AADETIREIESNGGKAFLIEADLNSIDGVKKLVEQL 78 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHH-----HHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHH
Confidence 445799999999999999999999999999876 45421 1111112222 235788999999999998876443
No 137
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.2e-09 Score=73.59 Aligned_cols=70 Identities=16% Similarity=0.195 Sum_probs=53.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++|+||||+|+||++++++|+++|++|+++.|+.. +.+ ....+. ..++.++.+|+++++.+.+.+..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~------~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVE------RLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAH 79 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 44589999999999999999999999999999999742 221 112221 23578999999999988886543
No 138
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.3e-09 Score=73.62 Aligned_cols=72 Identities=21% Similarity=0.142 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||.+++++|+++|++|++++|+... .......+. ...+.++.+|++|++.+.+.+...
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDA-----LEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQV 80 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHH-----HHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHH
Confidence 345789999999999999999999999999999986421 111112222 235778899999999998876443
No 139
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.3e-09 Score=73.50 Aligned_cols=65 Identities=17% Similarity=0.136 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+.. + ......+.++++|+.|++++.+.+..
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~------~-----~~~~~~~~~~~~D~~~~~~~~~~~~~ 68 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAP------E-----TVDGRPAEFHAADVRDPDQVAALVDA 68 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChh------h-----hhcCCceEEEEccCCCHHHHHHHHHH
Confidence 45678999999999999999999999999999999641 1 01123678899999999988887644
No 140
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.04 E-value=1.6e-09 Score=73.30 Aligned_cols=71 Identities=11% Similarity=0.097 Sum_probs=52.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh--cCCCeEEEEeeCCChhhhhHHHhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF--QGIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l--~~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
.++++||||+|+||++++++|.++|++|+++.|.... ........+ ....+.++.+|++|.+.+.+.+.+.
T Consensus 9 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 81 (258)
T PRK09134 9 PRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRD----EAEALAAEIRALGRRAVALQADLADEAEVRALVARA 81 (258)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHH
Confidence 4689999999999999999999999999888765311 111111112 1235788999999999988876443
No 141
>PRK08589 short chain dehydrogenase; Validated
Probab=99.04 E-value=1.7e-09 Score=74.07 Aligned_cols=77 Identities=12% Similarity=0.039 Sum_probs=56.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++..++++||||+++||.+++++|+++|++|++++|+ .. .......+. ...+.++.+|++|++++.+.+...
T Consensus 3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (272)
T PRK08589 3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EA-----VSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEI 76 (272)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HH-----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH
Confidence 3566789999999999999999999999999999987 21 111122222 224788999999999988875443
Q ss_pred hhhhh
Q 037506 82 GRSLG 86 (91)
Q Consensus 82 ~~~~~ 86 (91)
...+|
T Consensus 77 ~~~~g 81 (272)
T PRK08589 77 KEQFG 81 (272)
T ss_pred HHHcC
Confidence 33333
No 142
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.04 E-value=2.1e-09 Score=72.57 Aligned_cols=72 Identities=14% Similarity=0.095 Sum_probs=54.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||++++++|+++|++|++++|+... .......+. ...+.++.+|++|++.+.+++...
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 82 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAAT-----LEAAVAALRAAGGAAEALAFDIADEEAVAAAFARI 82 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 456899999999999999999999999999999997421 111112222 234789999999999988876443
No 143
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.03 E-value=2e-09 Score=73.07 Aligned_cols=68 Identities=10% Similarity=0.092 Sum_probs=52.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..++++||||+|+||.+++++|+++|++|++++|+.... ......+ ....+.++.+|++|++.+.+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~ 72 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKL-----EALAARLPYPGRHRWVVADLTSEAGREAVL 72 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHH-----HHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 457899999999999999999999999999999974211 1111122 1236789999999999888764
No 144
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.2e-09 Score=77.46 Aligned_cols=73 Identities=18% Similarity=0.206 Sum_probs=55.2
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~ 77 (91)
|-..+..+.++||||||.||++++++|.++|++|++++|+.. +.+ ....+. ...+.++.+|++|++.+++.
T Consensus 1 ~~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~------~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~ 74 (330)
T PRK06139 1 MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEE------ALQAVAEECRALGAEVLVVPTDVTDADQVKAL 74 (330)
T ss_pred CCcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHH
Confidence 334456789999999999999999999999999999999642 221 112222 23467889999999999886
Q ss_pred Hh
Q 037506 78 RM 79 (91)
Q Consensus 78 ~~ 79 (91)
..
T Consensus 75 ~~ 76 (330)
T PRK06139 75 AT 76 (330)
T ss_pred HH
Confidence 53
No 145
>PRK08017 oxidoreductase; Provisional
Probab=99.03 E-value=9e-10 Score=74.13 Aligned_cols=62 Identities=16% Similarity=0.078 Sum_probs=49.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
++++||||+|+||.++++.|.++|++|++++|+.. +.+. +...+++++.+|+.|.+.+...+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~------~~~~---~~~~~~~~~~~D~~~~~~~~~~~ 64 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPD------DVAR---MNSLGFTGILLDLDDPESVERAA 64 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHH------HhHH---HHhCCCeEEEeecCCHHHHHHHH
Confidence 57999999999999999999999999999998642 2221 22236788999999998877654
No 146
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.03 E-value=1.9e-09 Score=72.02 Aligned_cols=67 Identities=13% Similarity=0.079 Sum_probs=52.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+++++||||+|+||++++++|.++|++|++++|+... .. ..+...++.++.+|+.|++.+.+.+...
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-----~~---~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 68 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYP-----AI---DGLRQAGAQCIQADFSTNAGIMAFIDEL 68 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchh-----HH---HHHHHcCCEEEEcCCCCHHHHHHHHHHH
Confidence 4589999999999999999999999999999987421 11 1222235788999999999988876443
No 147
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.6e-09 Score=76.76 Aligned_cols=73 Identities=14% Similarity=0.111 Sum_probs=54.8
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..+..++|+||||+|+||++++++|.++|++|++++|+... .......+. ...+.++.+|++|++++++.+..
T Consensus 4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~-----l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~ 78 (334)
T PRK07109 4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEG-----LEALAAEIRAAGGEALAVVADVADAEAVQAAADR 78 (334)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHH
Confidence 34566789999999999999999999999999999986421 111112222 23577899999999999887543
No 148
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.4e-09 Score=73.46 Aligned_cols=69 Identities=19% Similarity=0.134 Sum_probs=52.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
++++||||+|+||+++++.|+++|++|++++|+.... ......+. ...+.++++|++|++.+.+.+...
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 72 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL-----EEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQI 72 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence 6799999999999999999999999999999874211 11111121 235788999999999998875443
No 149
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.03 E-value=1.6e-09 Score=75.37 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+|+||.++++.|+++|++|++++|+.. +.+ ....+. ...+.++.+|+.|++++.+.+.
T Consensus 38 ~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~------~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 109 (293)
T PRK05866 38 LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARRED------LLDAVADRITRAGGDAMAVPCDLSDLDAVDALVA 109 (293)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHH------HHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHH
Confidence 44578999999999999999999999999999999742 211 112221 2246789999999998888654
No 150
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.03 E-value=2e-09 Score=74.02 Aligned_cols=80 Identities=13% Similarity=0.004 Sum_probs=58.5
Q ss_pred CCCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-C-CCeEEEEeeCCChhhhhH
Q 037506 1 MEGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-G-IGVTIIENLCDVGQVTSS 76 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~-~~v~~v~gDl~d~~~l~~ 76 (91)
||+.+..+.++||||++ .||+.++++|.++|++|++..|+.. ..+....+. . ....++++|++|++++++
T Consensus 1 ~~~~l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~------~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~ 74 (271)
T PRK06505 1 MEGLMQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA------LGKRVKPLAESLGSDFVLPCDVEDIASVDA 74 (271)
T ss_pred CccccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH------HHHHHHHHHHhcCCceEEeCCCCCHHHHHH
Confidence 88999889999999996 8999999999999999999888531 111111121 1 123568999999999998
Q ss_pred HHhhhhhhhh
Q 037506 77 QRMRSGRSLG 86 (91)
Q Consensus 77 ~~~~~~~~~~ 86 (91)
.+...-..+|
T Consensus 75 ~~~~~~~~~g 84 (271)
T PRK06505 75 VFEALEKKWG 84 (271)
T ss_pred HHHHHHHHhC
Confidence 7654433344
No 151
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.02 E-value=2.5e-09 Score=71.27 Aligned_cols=69 Identities=14% Similarity=0.100 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++|+||||+|+||+++++.|.++|++|++++|+.. +...+ ..+. ..++.++++|++|++.+.+.+.+
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 74 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNEN------KLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEK 74 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHH
Confidence 4578999999999999999999999999999999642 22111 1121 12578899999999988886533
No 152
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.02 E-value=2.8e-09 Score=72.12 Aligned_cols=72 Identities=10% Similarity=0.089 Sum_probs=54.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..+.++||||+|+||++++++|.++|++|++++|+.... .......+. ...+.++.+|+.|++.+.+.+..
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~----~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~ 79 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDG----LAETAEHIEAAGRRAIQIAADVTSKADLRAAVAR 79 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchH----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999864211 111112222 23577899999999998887543
No 153
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.02 E-value=1.8e-09 Score=73.00 Aligned_cols=72 Identities=10% Similarity=-0.007 Sum_probs=51.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++|+||||+|+||++++++|.++|++|++++|+.... ....+.+... ....+.++.+|++|++.+...+..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 74 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKA--ANVAQEINAEYGEGMAYGFGADATSEQSVLALSRG 74 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH--HHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHH
Confidence 35799999999999999999999999999999864211 0011111111 113578999999999988876543
No 154
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.02 E-value=1.9e-09 Score=71.81 Aligned_cols=64 Identities=20% Similarity=0.117 Sum_probs=50.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++++||||+|++|++++++|.++|++|++++|+... ...+..+ .++.++.+|++|++.+++.+
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~------~~~~~~~--~~~~~~~~D~~d~~~~~~~~ 64 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQ------DTALQAL--PGVHIEKLDMNDPASLDQLL 64 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcc------hHHHHhc--cccceEEcCCCCHHHHHHHH
Confidence 3679999999999999999999999999999997532 1111222 25788899999998887754
No 155
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.8e-09 Score=72.68 Aligned_cols=74 Identities=12% Similarity=0.076 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG 82 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~ 82 (91)
+..++++||||+|+||.+++++|.++|++|++++|+.... ......+. ...+.++++|+.|.+.+.+.+....
T Consensus 6 l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (252)
T PRK07035 6 LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC-----QAVADAIVAAGGKAEALACHIGEMEQIDALFAHIR 80 (252)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3457899999999999999999999999999999864211 11112222 1246789999999998887654433
Q ss_pred h
Q 037506 83 R 83 (91)
Q Consensus 83 ~ 83 (91)
.
T Consensus 81 ~ 81 (252)
T PRK07035 81 E 81 (252)
T ss_pred H
Confidence 3
No 156
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.01 E-value=2.6e-09 Score=71.65 Aligned_cols=71 Identities=11% Similarity=0.014 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++|+||||+|+||++++++|+++|++|++..|+... ........+. ...+.++.+|+++++.+.+.+.+
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAE----EMNETLKMVKENGGEGIGVLADVSTREGCETLAKA 77 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChH----HHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHH
Confidence 45789999999999999999999999999887765311 1111112222 12456789999999988776533
No 157
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.3e-09 Score=76.41 Aligned_cols=73 Identities=7% Similarity=0.053 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-cCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+++||.+++++|+++|++|++..|+.... .+....+... ....+.++.+|+.|.++++++..
T Consensus 12 l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~--~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~ 85 (313)
T PRK05854 12 LSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKG--EAAVAAIRTAVPDAKLSLRALDLSSLASVAALGE 85 (313)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHH
Confidence 4567899999999999999999999999999999974221 0001111111 12357899999999999988753
No 158
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.4e-09 Score=74.29 Aligned_cols=70 Identities=7% Similarity=0.036 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++.+.++||||+|.||++++++|+++|++|++++|+.... ......+. ..++.++.+|++|++.+++.+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~ 78 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENL-----KKAREKIKSESNVDVSYIVADLTKREDLERTVK 78 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence 4567899999999999999999999999999999864211 11111221 2357889999999999988754
No 159
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.01 E-value=1.8e-09 Score=81.61 Aligned_cols=67 Identities=15% Similarity=0.146 Sum_probs=51.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc-----------CCCeEEEEeeCCChhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ-----------GIGVTIIENLCDVGQV 73 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~-----------~~~v~~v~gDl~d~~~ 73 (91)
..+.|+||||+|+||++++++|++.|++|++++|+.. +... ...+. ..+++++++|+.|.+.
T Consensus 79 ~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~e------kl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 79 DEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQ------RAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHH------HHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 3468999999999999999999999999999999742 2111 11110 1247899999999998
Q ss_pred hhHHH
Q 037506 74 TSSQR 78 (91)
Q Consensus 74 l~~~~ 78 (91)
+.+++
T Consensus 153 I~~aL 157 (576)
T PLN03209 153 IGPAL 157 (576)
T ss_pred HHHHh
Confidence 87764
No 160
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.01 E-value=2.8e-09 Score=71.91 Aligned_cols=70 Identities=11% Similarity=0.056 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
..++++||||+|+||.+++++|+++|++|++++|+... .......+. ...+.++.+|++|++.+.+.+..
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 79 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAER-----AELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEH 79 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHH-----HHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHH
Confidence 45789999999999999999999999999999987421 111112222 22467789999999998887543
No 161
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.01 E-value=3.7e-09 Score=72.51 Aligned_cols=77 Identities=12% Similarity=0.166 Sum_probs=54.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-cchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-PSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+...... ..+. .....+. ...+.++.+|++|++.+.+.+..
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 345789999999999999999999999999999987532100 0001 1111121 23577889999999999887644
Q ss_pred h
Q 037506 81 S 81 (91)
Q Consensus 81 ~ 81 (91)
.
T Consensus 84 ~ 84 (273)
T PRK08278 84 A 84 (273)
T ss_pred H
Confidence 3
No 162
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.01 E-value=1.1e-09 Score=72.71 Aligned_cols=63 Identities=17% Similarity=0.222 Sum_probs=50.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++++||||+|+||++++++|+++|++|++++|+.. ..+ .+...+++++.+|++|.+.+.+.+
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~------~~~---~~~~~~~~~~~~D~~~~~~v~~~~ 63 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAA------ALA---ALQALGAEALALDVADPASVAGLA 63 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHH------HHH---HHHhccceEEEecCCCHHHHHHHH
Confidence 357999999999999999999999999999998742 221 122235678999999999888753
No 163
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.01 E-value=2.7e-09 Score=72.41 Aligned_cols=64 Identities=13% Similarity=0.088 Sum_probs=52.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+.... ....+.++.+|++|++.+.+.+..
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~------------~~~~~~~~~~D~~~~~~~~~~~~~ 70 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDG------------QHENYQFVPTDVSSAEEVNHTVAE 70 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccc------------ccCceEEEEccCCCHHHHHHHHHH
Confidence 4467899999999999999999999999999999875321 122578899999999998887543
No 164
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.00 E-value=2.9e-09 Score=72.45 Aligned_cols=72 Identities=15% Similarity=0.144 Sum_probs=51.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..++|+||||+|+||++++++|+++| ++|++++|+.... .....+.+.......++++.+|+.|++.+.+.+
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~-~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~ 79 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPR-RDAAVAQMKAAGASSVEVIDFDALDTDSHPKVI 79 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchh-HHHHHHHHHhcCCCceEEEEecCCChHHHHHHH
Confidence 45689999999999999999999995 9999999975320 000111111111225789999999998876654
No 165
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.00 E-value=1.1e-09 Score=76.00 Aligned_cols=70 Identities=24% Similarity=0.292 Sum_probs=54.9
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC---CCeEEEEeeCCChhhhhHHH
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG---IGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~---~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.+.+++++|||||+.||..+++.|.++||+|+++.|+. ++.. ...++.. ..++++.+|++|++.+.+..
T Consensus 2 ~~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~------~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~ 75 (265)
T COG0300 2 GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARRE------DKLEALAKELEDKTGVEVEVIPADLSDPEALERLE 75 (265)
T ss_pred CCCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcH------HHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHH
Confidence 356778999999999999999999999999999999975 3322 2223332 24688999999998887753
No 166
>PLN00016 RNA-binding protein; Provisional
Probab=99.00 E-value=7.3e-10 Score=79.37 Aligned_cols=65 Identities=25% Similarity=0.408 Sum_probs=46.1
Q ss_pred CCCeEEEE----cCCchHHHHHHHHHHhCCCcEEEEecCCCCCCC-c-chHHHhhhhcCCCeEEEEeeCCC
Q 037506 6 TKPKKLIF----GGTGYLGKYMVKASVSSGHNTFVYARPVTQNSR-P-SKLEIHKEFQGIGVTIIENLCDV 70 (91)
Q Consensus 6 ~~~~ilIt----GatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~-~-~~~~~~~~l~~~~v~~v~gDl~d 70 (91)
.+++|+|| |||||||++++++|+++||+|++++|....... + ........+...+++++.+|+.|
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH
Confidence 34789999 999999999999999999999999997532100 0 00001112223468899999877
No 167
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.00 E-value=2.7e-09 Score=72.56 Aligned_cols=72 Identities=13% Similarity=-0.039 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|+||.+++++|+++|++|+++.|+... .......+. ...+.++++|++|++++.+++...
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 81 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQEL-----VDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQI 81 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence 445789999999999999999999999999999886421 111112222 225788999999999998876443
No 168
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=98.99 E-value=2.9e-09 Score=71.40 Aligned_cols=74 Identities=11% Similarity=0.079 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRSG 82 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~~ 82 (91)
+..++++||||+|+||++++++|+++|++|++..+.... ........+.. ..+.++.+|++|++.+.+.+....
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 79 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKE----AAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAV 79 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 456789999999999999999999999999876654211 11111122222 247889999999999988764433
No 169
>PRK06181 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.2e-09 Score=72.72 Aligned_cols=68 Identities=13% Similarity=0.134 Sum_probs=51.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++++||||+|+||+++++.|+++|++|++++|+.... ......+. ...+.++.+|+.|++.+.+.+..
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 71 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRL-----ASLAQELADHGGEALVVPTDVSDAEACERLIEA 71 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 5799999999999999999999999999999874211 11111121 23578899999999988887543
No 170
>PRK12743 oxidoreductase; Provisional
Probab=98.99 E-value=3.1e-09 Score=71.98 Aligned_cols=70 Identities=9% Similarity=-0.018 Sum_probs=51.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+++++||||+|+||++++++|+++|++|.++.|... +... ....+. ...+.++.+|++|++.+++.+...
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDE-----EGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCCh-----HHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHH
Confidence 458999999999999999999999999988876532 1111 112222 235788999999999988876443
No 171
>PRK12937 short chain dehydrogenase; Provisional
Probab=98.99 E-value=2.7e-09 Score=71.32 Aligned_cols=71 Identities=10% Similarity=0.079 Sum_probs=52.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.++++||||+|+||+++++.|+++|++|+++.|+... ........+. ...+.++.+|++|++.+.+.+..
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 76 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAA----AADELVAEIEAAGGRAIAVQADVADAAAVTRLFDA 76 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHH----HHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHH
Confidence 34689999999999999999999999999888775321 1111111221 23578899999999998887643
No 172
>PRK07060 short chain dehydrogenase; Provisional
Probab=98.98 E-value=4.4e-09 Score=70.27 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=51.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+..++++||||+|+||+++++.|.++|++|++++|+. ++...+.. ..+..++.+|++|.+.+.+.+
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~------~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~ 72 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNA------AALDRLAG--ETGCEPLRLDVGDDAAIRAAL 72 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHH--HhCCeEEEecCCCHHHHHHHH
Confidence 4557899999999999999999999999999999864 22221111 124678899999998887764
No 173
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.98 E-value=1.5e-09 Score=81.94 Aligned_cols=60 Identities=20% Similarity=0.259 Sum_probs=44.3
Q ss_pred CeEEEEcCCchHHHHHHHHHH--hCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCCh
Q 037506 8 PKKLIFGGTGYLGKYMVKASV--SSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll--~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~ 71 (91)
|+|+|||||||||++++++|+ +.+++|++++|+... .....+ ......+++++.+|++|+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~----~~~~~~~~~~~~~~v~~~~~Dl~~~ 63 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL----SRLEALAAYWGADRVVPLVGDLTEP 63 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH----HHHHHHHHhcCCCcEEEEecccCCc
Confidence 479999999999999999999 588999999996421 111111 111124689999999984
No 174
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=98.98 E-value=3.4e-09 Score=71.87 Aligned_cols=69 Identities=10% Similarity=0.035 Sum_probs=52.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
|+++||||+|.||+.++++|+++|++|++++|+... .......+.. ..+.++.+|++|++++++.+...
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~ 70 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEEN-----LEKALKELKEYGEVYAVKADLSDKDDLKNLVKEA 70 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHH
Confidence 579999999999999999999999999999986421 1111122221 25788999999999998876443
No 175
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=98.98 E-value=1.8e-09 Score=75.89 Aligned_cols=62 Identities=19% Similarity=0.291 Sum_probs=47.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~ 71 (91)
..++|+||||.||||+||++.|..+||+|++++...++. +......+....++++..|+..+
T Consensus 26 ~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~----k~n~~~~~~~~~fel~~hdv~~p 87 (350)
T KOG1429|consen 26 QNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGR----KENLEHWIGHPNFELIRHDVVEP 87 (350)
T ss_pred CCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccc----hhhcchhccCcceeEEEeechhH
Confidence 357999999999999999999999999999999765432 21222233455788888888765
No 176
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=98.97 E-value=3.8e-09 Score=71.42 Aligned_cols=71 Identities=15% Similarity=0.021 Sum_probs=53.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++|+||||+|+||++++++|.++|++|++++|+.... ......+. ...+.++.+|++|.+++.+++..
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~ 81 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAA-----NHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-----HHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 4468999999999999999999999999999998864211 11111121 22467889999999998886543
No 177
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=98.97 E-value=3.8e-09 Score=70.85 Aligned_cols=69 Identities=10% Similarity=0.032 Sum_probs=50.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++|+||||+|+||+.+++.|+++|++|.++.++.. +... ....+. ...+.++.+|++|++++.+.+..
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDA-----AAAEETADAVRAAGGRACVVAGDVANEADVIAMFDA 73 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCH-----HHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHH
Confidence 468999999999999999999999999887764321 1111 111121 23578999999999988876543
No 178
>PRK06198 short chain dehydrogenase; Provisional
Probab=98.97 E-value=3.5e-09 Score=71.52 Aligned_cols=71 Identities=15% Similarity=0.151 Sum_probs=53.0
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++..++++||||+|+||++++++|.++|++ |++++|+.... ......+. ...+.++.+|++|++.+.+.+.
T Consensus 3 ~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (260)
T PRK06198 3 RLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKG-----EAQAAELEALGAKAVFVQADLSDVEDCRRVVA 76 (260)
T ss_pred CCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHH-----HHHHHHHHhcCCeEEEEEccCCCHHHHHHHHH
Confidence 456688999999999999999999999999 99999864211 11111221 2246778999999998888653
No 179
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=98.97 E-value=4e-09 Score=70.89 Aligned_cols=68 Identities=18% Similarity=0.072 Sum_probs=51.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++++||||+|+||.+++++|++.|++|+++.|+... .......+. ...+.++.+|++|++.+.+.+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~ 70 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEET-----AKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQ 70 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 469999999999999999999999999999986421 111112222 23478899999999998887543
No 180
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=98.97 E-value=2.8e-09 Score=71.70 Aligned_cols=68 Identities=15% Similarity=0.082 Sum_probs=48.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCC--ChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCD--VGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~--d~~~l~~~~ 78 (91)
..++++||||+|+||.+++++|++.|++|++++|+... .......+. ...+.++.+|++ +++.+.+.+
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~ 83 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEK-----LEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLA 83 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHH-----HHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHH
Confidence 45789999999999999999999999999999997421 111112222 234678888886 566666543
No 181
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=98.96 E-value=3.1e-09 Score=73.26 Aligned_cols=65 Identities=26% Similarity=0.332 Sum_probs=48.2
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+|+|||||||||++++++|+++|++|++++|..... +.. ..... ..+++++.+|+.|++.+.+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~--~~~---~~~~~~~~~~~~~~~D~~~~~~~~~~~ 66 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGS--PEA---LKRGERITRVTFVEGDLRDRELLDRLF 66 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccc--hhh---hhhhccccceEEEECCCCCHHHHHHHH
Confidence 589999999999999999999999999887643221 111 11111 115778899999999888765
No 182
>PRK08303 short chain dehydrogenase; Provisional
Probab=98.96 E-value=6e-09 Score=73.06 Aligned_cols=81 Identities=16% Similarity=0.097 Sum_probs=57.2
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC----CcchHH-HhhhhcC--CCeEEEEeeCCChhh
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS----RPSKLE-IHKEFQG--IGVTIIENLCDVGQV 73 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~----~~~~~~-~~~~l~~--~~v~~v~gDl~d~~~ 73 (91)
|-+++..+.++||||++.||.+++++|++.|++|++++|+..... ++++.. ....+.. ..+.++++|++|+++
T Consensus 2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~ 81 (305)
T PRK08303 2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ 81 (305)
T ss_pred CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 345567789999999999999999999999999999999743110 011111 1112221 246788999999999
Q ss_pred hhHHHhhh
Q 037506 74 TSSQRMRS 81 (91)
Q Consensus 74 l~~~~~~~ 81 (91)
+++.+...
T Consensus 82 v~~~~~~~ 89 (305)
T PRK08303 82 VRALVERI 89 (305)
T ss_pred HHHHHHHH
Confidence 99876443
No 183
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.96 E-value=7.1e-09 Score=70.71 Aligned_cols=77 Identities=5% Similarity=-0.009 Sum_probs=56.1
Q ss_pred CCCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 1 MEGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 1 ~~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
|...+..+.++||||+ +-||.+++++|+++|++|++..|.... .+..+ ....+....+.++++|++|++++++.
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~---~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 77 (257)
T PRK08594 1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERL---EKEVRELADTLEGQESLLLPCDVTSDEEITAC 77 (257)
T ss_pred CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccc---hHHHHHHHHHcCCCceEEEecCCCCHHHHHHH
Confidence 4455667899999997 899999999999999999998875321 12222 11222223578899999999999887
Q ss_pred Hhh
Q 037506 78 RMR 80 (91)
Q Consensus 78 ~~~ 80 (91)
+..
T Consensus 78 ~~~ 80 (257)
T PRK08594 78 FET 80 (257)
T ss_pred HHH
Confidence 643
No 184
>PRK05865 hypothetical protein; Provisional
Probab=98.96 E-value=2.9e-09 Score=83.52 Aligned_cols=59 Identities=19% Similarity=0.217 Sum_probs=49.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+|||||||||++++++|+++||+|++++|+... . . ..+++++.+|++|.+.+.+++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~-----~------~-~~~v~~v~gDL~D~~~l~~al 59 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPD-----S------W-PSSADFIAADIRDATAVESAM 59 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchh-----h------c-ccCceEEEeeCCCHHHHHHHH
Confidence 579999999999999999999999999999986311 0 1 125789999999999888765
No 185
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=98.95 E-value=3.4e-09 Score=72.44 Aligned_cols=70 Identities=19% Similarity=0.180 Sum_probs=52.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..+.++||||+|+||++++++|+++|++|++++|+... .......+. ...+.++++|+.|++.+.+.+.
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~ 79 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEK-----AEAVVAEIKAAGGEALAVKADVLDKESLEQARQ 79 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHH
Confidence 445789999999999999999999999999999986421 111112222 2247889999999998887653
No 186
>PRK09242 tropinone reductase; Provisional
Probab=98.95 E-value=5.1e-09 Score=70.78 Aligned_cols=77 Identities=12% Similarity=0.061 Sum_probs=55.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|.||+++++.|.++|++|++++|+... .......+. ...+.++.+|+.|++.+.+.+..
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 81 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADA-----LAQARDELAEEFPEREVHGLAADVSDDEDRRAILDW 81 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHH-----HHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 345789999999999999999999999999999996421 111112221 23578889999999998887644
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
....+|
T Consensus 82 ~~~~~g 87 (257)
T PRK09242 82 VEDHWD 87 (257)
T ss_pred HHHHcC
Confidence 333343
No 187
>PRK07832 short chain dehydrogenase; Provisional
Probab=98.95 E-value=2.7e-09 Score=72.95 Aligned_cols=68 Identities=9% Similarity=0.029 Sum_probs=49.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++++||||+|+||.++++.|.++|++|+++.|+... .......+. .....++.+|+.|++.+.+....
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 71 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADG-----LAQTVADARALGGTVPEHRALDISDYDAVAAFAAD 71 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHH
Confidence 479999999999999999999999999999886421 111112221 11245678999999988876544
No 188
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=98.95 E-value=3.7e-09 Score=70.60 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=48.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCCCCCCCcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPVTQNSRPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~~~~~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+.++||||+|+||++++++|+++|++|+++. |+. ++. +....+. ...+.++++|+.|++.+.+.+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~ 71 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNL------HAAQEVVNLITQAGGKAFVLQADISDENQVVAMFT 71 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCh------HHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHH
Confidence 5799999999999999999999999998754 432 111 1112222 2247889999999999888653
No 189
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.94 E-value=7.7e-09 Score=70.42 Aligned_cols=75 Identities=13% Similarity=0.037 Sum_probs=56.0
Q ss_pred CCCCCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHH
Q 037506 1 MEGKNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 1 ~~~~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
|-+++..+.++|||| ++.||.+++++|.++|++|++.+|+.. ++..+.+ ..+. ..+.++.+|++|++++++.
T Consensus 1 ~~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~----~~~~~~~~~~~~-~~~~~~~~Dv~~~~~i~~~ 75 (256)
T PRK07889 1 MMGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRA----LRLTERIAKRLP-EPAPVLELDVTNEEHLASL 75 (256)
T ss_pred CcccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccc----hhHHHHHHHhcC-CCCcEEeCCCCCHHHHHHH
Confidence 556677789999999 899999999999999999999987531 1111111 2222 2567899999999999887
Q ss_pred Hhh
Q 037506 78 RMR 80 (91)
Q Consensus 78 ~~~ 80 (91)
+..
T Consensus 76 ~~~ 78 (256)
T PRK07889 76 ADR 78 (256)
T ss_pred HHH
Confidence 533
No 190
>PRK07201 short chain dehydrogenase; Provisional
Probab=98.94 E-value=3.6e-09 Score=79.95 Aligned_cols=79 Identities=16% Similarity=0.089 Sum_probs=57.6
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++..++++||||||+||.+++++|+++|++|++++|+... .......+. ...+.++.+|+.|.+.+.+.+..
T Consensus 367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 441 (657)
T PRK07201 367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEA-----LDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKD 441 (657)
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 34567889999999999999999999999999999997421 111112221 23578899999999999887644
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
....+|
T Consensus 442 ~~~~~g 447 (657)
T PRK07201 442 ILAEHG 447 (657)
T ss_pred HHHhcC
Confidence 333333
No 191
>PRK07577 short chain dehydrogenase; Provisional
Probab=98.94 E-value=6.1e-09 Score=69.22 Aligned_cols=59 Identities=17% Similarity=0.134 Sum_probs=48.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..++++||||+|+||++++++|+++|++|+++.|+.... . ..+++.+|++|++.+.+.+
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~---~~~~~~~D~~~~~~~~~~~ 60 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD-----------F---PGELFACDLADIEQTAATL 60 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc-----------c---CceEEEeeCCCHHHHHHHH
Confidence 346899999999999999999999999999999974210 1 2367899999998887764
No 192
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.94 E-value=7.7e-09 Score=72.27 Aligned_cols=75 Identities=9% Similarity=0.056 Sum_probs=55.0
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|...+..++++||||+|+||++++++|+++|++|++.+|.... ........+. ...+.++.+|++|++.+.+.+
T Consensus 6 ~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~----~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~ 81 (306)
T PRK07792 6 NTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASAL----DASDVLDEIRAAGAKAVAVAGDISQRATADELV 81 (306)
T ss_pred CCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchh----HHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 3445667899999999999999999999999999998875321 1111112222 234778999999999888865
Q ss_pred h
Q 037506 79 M 79 (91)
Q Consensus 79 ~ 79 (91)
.
T Consensus 82 ~ 82 (306)
T PRK07792 82 A 82 (306)
T ss_pred H
Confidence 3
No 193
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=98.94 E-value=6.1e-09 Score=69.45 Aligned_cols=68 Identities=10% Similarity=0.053 Sum_probs=51.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++++||||+|+||+++++.|.++|++|++++|+... .......... ...+.++.+|++|.+.+.+.+.
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGND----CAKDWFEEYGFTEDQVRLKELDVTDTEECAEALA 72 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHH----HHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHH
Confidence 589999999999999999999999999999987421 1111111111 2347899999999998888753
No 194
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=98.93 E-value=9.7e-09 Score=68.82 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=50.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..+.++||||||+||++++++|+++|++|+++.+... +...+....+. ...+..+.+|+.|.+.+.+.+.
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 73 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNS----PRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFD 73 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCCh----HHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3467999999999999999999999999888654321 11122222222 2246677899999998888653
No 195
>PRK05650 short chain dehydrogenase; Provisional
Probab=98.92 E-value=6.3e-09 Score=70.95 Aligned_cols=66 Identities=12% Similarity=-0.033 Sum_probs=50.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+++||||+|+||++++++|+++|++|++++|+... .......+. ...+.++.+|+.|++.+.+.+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~ 68 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEG-----GEETLKLLREAGGDGFYQRCDVRDYSQLTALA 68 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCceEEEEccCCCHHHHHHHH
Confidence 479999999999999999999999999999986421 111112222 235788999999999887764
No 196
>PRK05884 short chain dehydrogenase; Provisional
Probab=98.92 E-value=6.8e-09 Score=69.49 Aligned_cols=63 Identities=19% Similarity=0.225 Sum_probs=49.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+++||||+|.||+++++.|.++|++|++++|+. ++..... ...+++++++|++|++.+++.+
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~------~~~~~~~--~~~~~~~~~~D~~~~~~v~~~~ 63 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARR------DDLEVAA--KELDVDAIVCDNTDPASLEEAR 63 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHH--HhccCcEEecCCCCHHHHHHHH
Confidence 4799999999999999999999999999999863 2222111 1124678999999999888765
No 197
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=98.91 E-value=4.7e-09 Score=73.75 Aligned_cols=72 Identities=13% Similarity=0.051 Sum_probs=55.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH--HhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE--IHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++..||||-||+-|++|++.|++.||+|..+.|.++.. ++.... .........++++.+|++|...+.+.+.
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~-n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~ 75 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSF-NTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILE 75 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccC-CcccceeccccccCCceeEEEeccccchHHHHHHHH
Confidence 46789999999999999999999999999999986544 232211 1122233458899999999999888753
No 198
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=98.89 E-value=1e-08 Score=68.25 Aligned_cols=68 Identities=15% Similarity=0.161 Sum_probs=50.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+.++||||+|+||++++++|+++|++|+++.|... +.......... ...+.++.+|++|++.+.+.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 70 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNE----ERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVA 70 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCH----HHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHH
Confidence 46899999999999999999999999999988321 11111111111 2357899999999998887653
No 199
>PRK12742 oxidoreductase; Provisional
Probab=98.89 E-value=1.2e-08 Score=67.86 Aligned_cols=68 Identities=21% Similarity=0.165 Sum_probs=50.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++|+||||+|+||++++++|.++|++|+++.|.. ++..+.+. ...++.++.+|++|.+.+.+.+.
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~-----~~~~~~l~--~~~~~~~~~~D~~~~~~~~~~~~ 71 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGS-----KDAAERLA--QETGATAVQTDSADRDAVIDVVR 71 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCC-----HHHHHHHH--HHhCCeEEecCCCCHHHHHHHHH
Confidence 4567899999999999999999999999998877642 12221111 11246788999999888877653
No 200
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.89 E-value=1.2e-08 Score=67.09 Aligned_cols=67 Identities=22% Similarity=0.169 Sum_probs=50.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
|+++|||||||+|. +++.|.++||+|++++|+. ++...+ ..+. ...+.++.+|+.|++++.+++...
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~------~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~ 69 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARRE------VKLENVKRESTTPESITPLPLDYHDDDALKLAIKST 69 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCH------HHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence 57999999998876 9999999999999999864 222211 1121 235788899999999999876443
No 201
>PRK06123 short chain dehydrogenase; Provisional
Probab=98.89 E-value=1.1e-08 Score=68.45 Aligned_cols=68 Identities=9% Similarity=-0.032 Sum_probs=49.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.++||||+|+||++++++|+++|+.|.+..+.. +++.. ....+. ...+.++.+|++|.+++.+.+..
T Consensus 3 ~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~ 73 (248)
T PRK06123 3 KVMIITGASRGIGAATALLAAERGYAVCLNYLRN-----RDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEA 73 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEecCCC-----HHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHH
Confidence 4799999999999999999999999888776542 11111 112222 23467899999999988887543
No 202
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=98.89 E-value=1.6e-08 Score=68.47 Aligned_cols=71 Identities=11% Similarity=-0.020 Sum_probs=52.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..+.++||||+|.||.+++++|.+.|++|++++|... .+..+.+... ...+.++++|++|.+++.+.+..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~----~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~ 78 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP----TETIEQVTAL-GRRFLSLTADLRKIDGIPALLER 78 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch----HHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHH
Confidence 45678999999999999999999999999998876431 1111222221 23477889999999999887644
No 203
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=98.89 E-value=1.1e-08 Score=67.82 Aligned_cols=66 Identities=11% Similarity=0.114 Sum_probs=49.0
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++|||++|+||++++++|+++|++|++++|+.... .......+.. ..+.++.+|++|++.+.+.+.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 68 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEG----AEEVVEELKAYGVKALGVVCDVSDREDVKAVVE 68 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhH----HHHHHHHHHhcCCceEEEEecCCCHHHHHHHHH
Confidence 58999999999999999999999999999864211 1111122221 247889999999998888653
No 204
>PRK05855 short chain dehydrogenase; Validated
Probab=98.89 E-value=8.5e-09 Score=76.18 Aligned_cols=71 Identities=7% Similarity=-0.047 Sum_probs=53.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|.++|++|++++|+... .......+. ..++.++.+|++|++.+.+.+..
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~ 385 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAA-----AERTAELIRAAGAVAHAYRVDVSDADAMEAFAEW 385 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 456789999999999999999999999999999996421 111112222 23578899999999998887543
No 205
>PRK06125 short chain dehydrogenase; Provisional
Probab=98.88 E-value=1e-08 Score=69.47 Aligned_cols=70 Identities=14% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc---CCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ---GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~---~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+|.+|.++++.|+++|++|++++|+.... ......+. ...+.++.+|++|++.+.+.+.
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADAL-----EALAADLRAAHGVDVAVHALDLSSPEAREQLAA 77 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH
Confidence 4567999999999999999999999999999999874211 11111122 2357889999999999888653
No 206
>PRK05872 short chain dehydrogenase; Provisional
Probab=98.87 E-value=2.4e-08 Score=69.37 Aligned_cols=71 Identities=8% Similarity=0.017 Sum_probs=52.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc-CCCeEEEEeeCCChhhhhHHHhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ-GIGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
+..++++||||+|.||.++++.|.++|++|++++|+. ++.+ ....+. ...+..+.+|++|.+++.+.+.+.
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~------~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 79 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEE------AELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEA 79 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH------HHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHH
Confidence 4567899999999999999999999999999999864 2222 112222 123455679999999998876443
No 207
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=98.87 E-value=4.6e-09 Score=73.34 Aligned_cols=63 Identities=14% Similarity=0.338 Sum_probs=42.7
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHH-Hhhhh-------cCCCeEEEEeeCCCh
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLE-IHKEF-------QGIGVTIIENLCDVG 71 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~-~~~~l-------~~~~v~~v~gDl~d~ 71 (91)
+|+|||||||+|++++++|+++| ++|++++|..+.....++.. .+... ...+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~ 73 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEP 73 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcc
Confidence 58999999999999999999998 67999999753110000100 00000 003689999999764
No 208
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.87 E-value=1.2e-08 Score=71.37 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=58.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchH-HHhhhhcCC-CeEEEEeeCCChhhhhHHHhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKL-EIHKEFQGI-GVTIIENLCDVGQVTSSQRMRSG 82 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~-~~~~~l~~~-~v~~v~gDl~d~~~l~~~~~~~~ 82 (91)
+..+.++|||||..||.+++.+|.++|..+..+.|..... ++. +.+...... .+.++++|++|.+++.+++....
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl---~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~ 86 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRL---ERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAI 86 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhH---HHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHH
Confidence 4567899999999999999999999999988888865322 222 222222223 48999999999999999875544
Q ss_pred hhhh
Q 037506 83 RSLG 86 (91)
Q Consensus 83 ~~~~ 86 (91)
+-+|
T Consensus 87 ~~fg 90 (282)
T KOG1205|consen 87 RHFG 90 (282)
T ss_pred HhcC
Confidence 4454
No 209
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=98.87 E-value=4.2e-09 Score=71.69 Aligned_cols=58 Identities=17% Similarity=0.295 Sum_probs=38.0
Q ss_pred EEcCCchHHHHHHHHHHhCCC--cEEEEecCCCCCCCcchHHHh-hh---------h---cCCCeEEEEeeCCChh
Q 037506 12 IFGGTGYLGKYMVKASVSSGH--NTFVYARPVTQNSRPSKLEIH-KE---------F---QGIGVTIIENLCDVGQ 72 (91)
Q Consensus 12 ItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~~~~~~~~~~~~-~~---------l---~~~~v~~v~gDl~d~~ 72 (91)
|||||||+|++|+++|++++. +|++++|..+.. +..+.+ .. . ...+++++.||++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~---~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~ 73 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQ---SALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPN 73 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHH---HHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGG
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccc---cchhhhhhhcccccchhhhhhhhhccEEEEeccccccc
Confidence 799999999999999999886 899999976321 111111 11 1 1458999999999854
No 210
>PRK07791 short chain dehydrogenase; Provisional
Probab=98.86 E-value=2.3e-08 Score=69.26 Aligned_cols=83 Identities=13% Similarity=0.033 Sum_probs=56.5
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCC---CcchH-HHhhhhc--CCCeEEEEeeCCChhhhhHH
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNS---RPSKL-EIHKEFQ--GIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~---~~~~~-~~~~~l~--~~~v~~v~gDl~d~~~l~~~ 77 (91)
.+..+.++||||++.||..++++|+++|++|++++|+..... ..+.. .....+. ...+.++.+|++|++++.+.
T Consensus 3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 456688999999999999999999999999999887541000 01111 1122222 22467889999999998887
Q ss_pred Hhhhhhhhh
Q 037506 78 RMRSGRSLG 86 (91)
Q Consensus 78 ~~~~~~~~~ 86 (91)
+......+|
T Consensus 83 ~~~~~~~~g 91 (286)
T PRK07791 83 VDAAVETFG 91 (286)
T ss_pred HHHHHHhcC
Confidence 644333334
No 211
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=98.85 E-value=1.2e-08 Score=68.12 Aligned_cols=66 Identities=11% Similarity=0.084 Sum_probs=49.2
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
|+||||+|+||.+++++|.++|++|.+++|.... ........+. ...+.++.+|++|.+.+.+.+.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~----~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 68 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRS----DAESVVSAIQAQGGNARLLQFDVADRVACRTLLE 68 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHH----HHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHH
Confidence 5899999999999999999999999998875321 1111112222 2357899999999999888653
No 212
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.85 E-value=1.8e-08 Score=67.36 Aligned_cols=69 Identities=16% Similarity=0.043 Sum_probs=51.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+..++++||||+|+||+++++.|+++|++|++++|+.... ......+. ...+.++++|++|++.+.+.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~-----~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKL-----EEAVAECGALGTEVRGYAANVTDEEDVEATF 73 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-----HHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence 4567899999999999999999999999999999864211 11111121 235788999999998887754
No 213
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=98.85 E-value=2.3e-08 Score=73.12 Aligned_cols=68 Identities=10% Similarity=0.072 Sum_probs=50.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+.+++++||||+|+||++++++|.++|++|++++|+... ....... ....+..+.+|++|++.+.+.+
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~-----l~~~~~~-~~~~v~~v~~Dvsd~~~v~~~l 243 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDK-----ITLEING-EDLPVKTLHWQVGQEAALAELL 243 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHhh-cCCCeEEEEeeCCCHHHHHHHh
Confidence 346789999999999999999999999999999986421 1111111 1224678899999998887754
No 214
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.85 E-value=2.2e-08 Score=67.70 Aligned_cols=82 Identities=13% Similarity=0.142 Sum_probs=55.5
Q ss_pred CCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCC------CCcchHHHhhhhc--CCCeEEEEeeCCChhhh
Q 037506 5 NTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQN------SRPSKLEIHKEFQ--GIGVTIIENLCDVGQVT 74 (91)
Q Consensus 5 ~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~------~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l 74 (91)
+..++|+|||||| .||.+++++|.++|++|++++|++... ..++.......+. ...+.++.+|++|.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 3457899999996 699999999999999999999873210 0001111111121 23578999999999998
Q ss_pred hHHHhhhhhhhh
Q 037506 75 SSQRMRSGRSLG 86 (91)
Q Consensus 75 ~~~~~~~~~~~~ 86 (91)
..++......+|
T Consensus 83 ~~~~~~~~~~~g 94 (256)
T PRK12748 83 NRVFYAVSERLG 94 (256)
T ss_pred HHHHHHHHHhCC
Confidence 887655444333
No 215
>PRK12367 short chain dehydrogenase; Provisional
Probab=98.84 E-value=1.6e-08 Score=69.04 Aligned_cols=67 Identities=19% Similarity=0.132 Sum_probs=49.8
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+..++++||||+|+||++++++|+++|++|++++|+... .... ... ....++.+|++|.+.+.+.+
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~-----~~~~--~~~-~~~~~~~~D~~~~~~~~~~~ 77 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKIN-----NSES--NDE-SPNEWIKWECGKEESLDKQL 77 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchh-----hhhh--hcc-CCCeEEEeeCCCHHHHHHhc
Confidence 4556789999999999999999999999999999986411 1111 111 12367889999998877643
No 216
>PRK07831 short chain dehydrogenase; Provisional
Probab=98.84 E-value=1.5e-08 Score=68.69 Aligned_cols=71 Identities=10% Similarity=-0.020 Sum_probs=52.2
Q ss_pred CCCCeEEEEcCCc-hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHh
Q 037506 5 NTKPKKLIFGGTG-YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 5 ~~~~~ilItGatG-~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+..++++||||+| .||+++++.|+++|++|++.+|+.... ......+ ....+.++++|++|++.+.+.+.
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRL-----GETADELAAELGLGRVEAVVCDVTSEAQVDALID 89 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHH-----HHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHH
Confidence 4467899999997 599999999999999999988864211 1111112 11357889999999998888653
Q ss_pred h
Q 037506 80 R 80 (91)
Q Consensus 80 ~ 80 (91)
.
T Consensus 90 ~ 90 (262)
T PRK07831 90 A 90 (262)
T ss_pred H
Confidence 3
No 217
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=98.84 E-value=1.4e-08 Score=69.21 Aligned_cols=65 Identities=11% Similarity=0.100 Sum_probs=46.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-Hhhhhc---CCCeEEEEeeCCChhhhhHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQ---GIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~---~~~v~~v~gDl~d~~~l~~~ 77 (91)
+.++||||+|+||++++++|+++|++|+++.|+.. +... ....+. ...+.++.+|++|.+.+.++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~-----~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~ 70 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSA-----AAASTLAAELNARRPNSAVTCQADLSNSATLFSR 70 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcH-----HHHHHHHHHHHhccCCceEEEEccCCCchhhHHH
Confidence 46899999999999999999999999999876531 1111 112221 22456789999998866443
No 218
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=98.84 E-value=1.4e-08 Score=73.23 Aligned_cols=71 Identities=25% Similarity=0.264 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.+.+++||||+||+|+|++++|++.+ .+|++++..+... +...+. ..+....++++.+|++|...+..++-
T Consensus 3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~--~~~~e~-~~~~~~~v~~~~~D~~~~~~i~~a~~ 75 (361)
T KOG1430|consen 3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQS--NLPAEL-TGFRSGRVTVILGDLLDANSISNAFQ 75 (361)
T ss_pred cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcccc--ccchhh-hcccCCceeEEecchhhhhhhhhhcc
Confidence 45689999999999999999999988 8999999876422 111111 11124578999999999999988863
No 219
>PRK08703 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.1e-08 Score=67.15 Aligned_cols=68 Identities=15% Similarity=0.052 Sum_probs=47.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh---cCCCeEEEEeeCCC--hhhhhHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF---QGIGVTIIENLCDV--GQVTSSQ 77 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l---~~~~v~~v~gDl~d--~~~l~~~ 77 (91)
+..++++||||+|+||.++++.|+++|++|++++|+.... ......+ ....+.++.+|+.| .+.+.+.
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL-----EKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHH-----HHHHHHHHHcCCCCcceEEeeecccchHHHHHH
Confidence 4557899999999999999999999999999999975211 1111112 12245678899875 3344443
No 220
>PRK06484 short chain dehydrogenase; Validated
Probab=98.82 E-value=3.1e-08 Score=73.17 Aligned_cols=75 Identities=13% Similarity=0.091 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
..+.++||||+|.||.+++++|.++|++|++++|+.. +.+.+.......+..+.+|++|++.+.+.+......+
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~------~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 341 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAE------GAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARW 341 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHH------HHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHc
Confidence 3578999999999999999999999999999998642 2222121112346778999999999988764433333
Q ss_pred h
Q 037506 86 G 86 (91)
Q Consensus 86 ~ 86 (91)
|
T Consensus 342 g 342 (520)
T PRK06484 342 G 342 (520)
T ss_pred C
Confidence 3
No 221
>PRK08862 short chain dehydrogenase; Provisional
Probab=98.82 E-value=2.5e-08 Score=67.18 Aligned_cols=77 Identities=8% Similarity=-0.069 Sum_probs=56.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhhhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMRSG 82 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~~~ 82 (91)
+..+.++||||++-||..++++|.++|++|.++.|+.... .+....+. ...+..+.+|+.|++++.+.+....
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l-----~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSAL-----KDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHH-----HHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHH
Confidence 4557899999999999999999999999999999864221 11111121 2246778899999999988765544
Q ss_pred hhhh
Q 037506 83 RSLG 86 (91)
Q Consensus 83 ~~~~ 86 (91)
..+|
T Consensus 78 ~~~g 81 (227)
T PRK08862 78 QQFN 81 (227)
T ss_pred HHhC
Confidence 4455
No 222
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=98.82 E-value=1.5e-08 Score=77.90 Aligned_cols=76 Identities=9% Similarity=0.092 Sum_probs=55.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..++++||||+|+||++++++|+++|++|++++|+.... ......+ ....+.++++|++|++++.+.+..
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~-----~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAA-----EAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHH-----HHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHH
Confidence 4567899999999999999999999999999999864211 1111111 112467889999999999887654
Q ss_pred hhhhh
Q 037506 81 SGRSL 85 (91)
Q Consensus 81 ~~~~~ 85 (91)
....+
T Consensus 487 i~~~~ 491 (676)
T TIGR02632 487 VALAY 491 (676)
T ss_pred HHHhc
Confidence 43333
No 223
>PRK07069 short chain dehydrogenase; Validated
Probab=98.82 E-value=1.8e-08 Score=67.47 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=48.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHH-HhhhhcC----CCeEEEEeeCCChhhhhHHHhh
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLE-IHKEFQG----IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~----~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++||||+|+||.++++.|+++|++|++++|+.. ++.+ ....+.. ..+.++++|+.|++.+.+.+..
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~-----~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 72 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDA-----AGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQ 72 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcc-----hHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHH
Confidence 4899999999999999999999999999998731 1111 1111211 1234678999999998886543
No 224
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.82 E-value=3.5e-08 Score=67.71 Aligned_cols=80 Identities=10% Similarity=-0.021 Sum_probs=56.0
Q ss_pred CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+++..+.++||||++ -||+++++.|+++|++|++..|+.. . .+..+.+.. ......++.+|++|++++++.+..
T Consensus 2 ~~l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~-~--~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~ 77 (262)
T PRK07984 2 GFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-L--KGRVEEFAA-QLGSDIVLPCDVAEDASIDAMFAE 77 (262)
T ss_pred cccCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchh-H--HHHHHHHHh-ccCCceEeecCCCCHHHHHHHHHH
Confidence 346678899999985 8999999999999999998887521 0 111111111 112456789999999999998655
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
.....|
T Consensus 78 ~~~~~g 83 (262)
T PRK07984 78 LGKVWP 83 (262)
T ss_pred HHhhcC
Confidence 444444
No 225
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.80 E-value=4.5e-08 Score=66.79 Aligned_cols=79 Identities=13% Similarity=-0.037 Sum_probs=55.5
Q ss_pred CCCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHH
Q 037506 2 EGKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 2 ~~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~ 77 (91)
.|+++.+.++||||++ .||.+++++|.++|++|++..|+.. ..+....+.. ....++++|++|++++.+.
T Consensus 3 ~~~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~------~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~ 76 (260)
T PRK06603 3 TGLLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEV------LEKRVKPLAEEIGCNFVSELDVTNPKSISNL 76 (260)
T ss_pred CcccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchH------HHHHHHHHHHhcCCceEEEccCCCHHHHHHH
Confidence 3557778899999997 7999999999999999998887521 1111222211 1234578999999999987
Q ss_pred Hhhhhhhhh
Q 037506 78 RMRSGRSLG 86 (91)
Q Consensus 78 ~~~~~~~~~ 86 (91)
+......+|
T Consensus 77 ~~~~~~~~g 85 (260)
T PRK06603 77 FDDIKEKWG 85 (260)
T ss_pred HHHHHHHcC
Confidence 654444444
No 226
>PRK07041 short chain dehydrogenase; Provisional
Probab=98.79 E-value=2.1e-08 Score=66.58 Aligned_cols=64 Identities=14% Similarity=0.151 Sum_probs=49.1
Q ss_pred EEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHh
Q 037506 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 11 lItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+||||+|+||++++++|+++|++|++++|+... .......+. ..+++++.+|++|++.+.+.+.
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~ 65 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDR-----LAAAARALGGGAPVRTAALDITDEAAVDAFFA 65 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence 599999999999999999999999999997421 111112221 2367899999999999988764
No 227
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=98.78 E-value=1.4e-08 Score=69.57 Aligned_cols=33 Identities=24% Similarity=0.395 Sum_probs=31.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+|+|||||||||++++++|+++||+|++++|..
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~~ 33 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSSQ 33 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCcc
Confidence 589999999999999999999999999999863
No 228
>PRK05599 hypothetical protein; Provisional
Probab=98.78 E-value=2.8e-08 Score=67.22 Aligned_cols=67 Identities=13% Similarity=0.143 Sum_probs=49.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC---CCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~---~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|.++||||++.||..++++|. +|++|+++.|+.... ......+.. ..+.++.+|+.|++++++.+..
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~-----~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 70 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAA-----QGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQ 70 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHH-----HHHHHHHHhccCCceEEEEcccCCHHHHHHHHHH
Confidence 569999999999999999998 599999999864211 111122221 2367899999999999887544
No 229
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=98.77 E-value=3.3e-09 Score=73.98 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=31.9
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ 43 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (91)
|+|||||||||++|+.+|.+.||+|++++|++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~ 34 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPK 34 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcc
Confidence 6899999999999999999999999999998754
No 230
>PLN02778 3,5-epimerase/4-reductase
Probab=98.77 E-value=1.5e-08 Score=70.79 Aligned_cols=33 Identities=27% Similarity=0.381 Sum_probs=29.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR 39 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R 39 (91)
.|+||||||+||||++|+++|+++|++|+...+
T Consensus 9 ~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~ 41 (298)
T PLN02778 9 TLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG 41 (298)
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC
Confidence 478999999999999999999999999986543
No 231
>PRK12747 short chain dehydrogenase; Provisional
Probab=98.76 E-value=4.4e-08 Score=66.01 Aligned_cols=69 Identities=14% Similarity=0.039 Sum_probs=48.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..+.++||||+|+||++++++|.+.|++|.+..+... .........+. ...+..+.+|+.|.+.+...+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 73 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRK----EEAEETVYEIQSNGGSAFSIGANLESLHGVEALY 73 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCH----HHHHHHHHHHHhcCCceEEEecccCCHHHHHHHH
Confidence 4578999999999999999999999999988754321 11111112222 224677889999988877654
No 232
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=98.76 E-value=4e-08 Score=68.92 Aligned_cols=69 Identities=20% Similarity=0.195 Sum_probs=52.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++.++||||++.||.+++++|+++| ++|++++|+... ..+....+. ...+.++.+|++|.+++++.+..
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 74 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLK-----AEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQ 74 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHH-----HHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHH
Confidence 4689999999999999999999999 999999986421 111112222 23467889999999999887543
No 233
>PRK06484 short chain dehydrogenase; Validated
Probab=98.75 E-value=7.5e-08 Score=71.17 Aligned_cols=70 Identities=14% Similarity=0.117 Sum_probs=53.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
...+.++||||++.||..++++|.++|++|+++.|+... .......+ ...+.++.+|++|++++.+.+..
T Consensus 3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~ 72 (520)
T PRK06484 3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVER-----ARERADSL-GPDHHALAMDVSDEAQIREGFEQ 72 (520)
T ss_pred CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHH-----HHHHHHHh-CCceeEEEeccCCHHHHHHHHHH
Confidence 356789999999999999999999999999999986421 11111222 23567899999999998887644
No 234
>PRK08324 short chain dehydrogenase; Validated
Probab=98.75 E-value=6.8e-08 Score=74.20 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=53.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcC-CCeEEEEeeCCChhhhhHHHhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQG-IGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
..++++||||+|+||+++++.|.++|++|++++|+.. .... ...+.. ..+.++.+|++|++.+.+.+...
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~------~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~ 492 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEE------AAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEA 492 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHH------HHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHH
Confidence 4578999999999999999999999999999999742 2111 111211 26789999999999988876443
No 235
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=98.75 E-value=4.4e-08 Score=65.31 Aligned_cols=59 Identities=24% Similarity=0.160 Sum_probs=44.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
|+++||||+|+||++++++|++++ +.|....|+... ......+.++++|++|++.+++.
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~-----------~~~~~~~~~~~~Dls~~~~~~~~ 61 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKP-----------DFQHDNVQWHALDVTDEAEIKQL 61 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCcc-----------ccccCceEEEEecCCCHHHHHHH
Confidence 589999999999999999999986 455555554311 11234678899999999887774
No 236
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.75 E-value=1e-07 Score=64.63 Aligned_cols=84 Identities=13% Similarity=0.181 Sum_probs=55.2
Q ss_pred CCCCCCeEEEEcCCc--hHHHHHHHHHHhCCCcEEEEecCCCCC-----CCcchH-HHhhhhc--CCCeEEEEeeCCChh
Q 037506 3 GKNTKPKKLIFGGTG--YLGKYMVKASVSSGHNTFVYARPVTQN-----SRPSKL-EIHKEFQ--GIGVTIIENLCDVGQ 72 (91)
Q Consensus 3 ~~~~~~~ilItGatG--~iG~~l~~~Ll~~g~~V~~~~R~~~~~-----~~~~~~-~~~~~l~--~~~v~~v~gDl~d~~ 72 (91)
++...++++||||+| .||.+++++|+++|++|+++.|..... ...+.. .....+. ...+.++.+|++|.+
T Consensus 2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~ 81 (256)
T PRK12859 2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND 81 (256)
T ss_pred CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 356678999999995 799999999999999998875431100 001111 1111222 124678899999999
Q ss_pred hhhHHHhhhhhhhh
Q 037506 73 VTSSQRMRSGRSLG 86 (91)
Q Consensus 73 ~l~~~~~~~~~~~~ 86 (91)
++.+.+......+|
T Consensus 82 ~i~~~~~~~~~~~g 95 (256)
T PRK12859 82 APKELLNKVTEQLG 95 (256)
T ss_pred HHHHHHHHHHHHcC
Confidence 99887644444444
No 237
>PLN02503 fatty acyl-CoA reductase 2
Probab=98.74 E-value=5.8e-08 Score=74.02 Aligned_cols=38 Identities=18% Similarity=0.402 Sum_probs=32.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEecCCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYARPVTQ 43 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R~~~~ 43 (91)
..++|+|||||||+|++|++.|++.+. +|++++|....
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~ 158 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDK 158 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCc
Confidence 457999999999999999999998764 67999997543
No 238
>PRK06720 hypothetical protein; Provisional
Probab=98.73 E-value=1.2e-07 Score=61.85 Aligned_cols=69 Identities=10% Similarity=-0.008 Sum_probs=51.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+..+.++||||++.||..+++.|.+.|++|.+++|+... .......+. .....++.+|++|.+.+.+.+
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v 84 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQES-----GQATVEEITNLGGEALFVSYDMEKQGDWQRVI 84 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHH-----HHHHHHHHHhcCCcEEEEEccCCCHHHHHHHH
Confidence 345789999999999999999999999999999986421 111112221 224667899999998888764
No 239
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=98.72 E-value=1.6e-08 Score=69.01 Aligned_cols=34 Identities=29% Similarity=0.602 Sum_probs=31.5
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ 43 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (91)
|+|||||||||+++++.|+++|++|++++|+...
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 34 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPA 34 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCC
Confidence 6899999999999999999999999999997643
No 240
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.71 E-value=1e-07 Score=64.85 Aligned_cols=78 Identities=12% Similarity=-0.042 Sum_probs=54.2
Q ss_pred CCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 4 KNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 4 ~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
++..+.++||||+ +.||..++++|+++|++|.+.+|+.... +....+ ..+ ....++.+|++|++++.+.+..
T Consensus 7 ~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~---~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~ 81 (258)
T PRK07533 7 PLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKAR---PYVEPLAEEL--DAPIFLPLDVREPGQLEAVFAR 81 (258)
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhH---HHHHHHHHhh--ccceEEecCcCCHHHHHHHHHH
Confidence 3556789999998 4899999999999999999998864210 111111 112 1346789999999999887644
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
.....|
T Consensus 82 ~~~~~g 87 (258)
T PRK07533 82 IAEEWG 87 (258)
T ss_pred HHHHcC
Confidence 333333
No 241
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=98.71 E-value=7.8e-08 Score=60.87 Aligned_cols=70 Identities=19% Similarity=0.231 Sum_probs=50.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|.++||||++-||..++++|+++| +.|.++.|+... +........+. ...+.++++|+++++.+++.+..
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~---~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 73 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDS---EGAQELIQELKAPGAKITFIECDLSDPESIRALIEE 73 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHH---HHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccc---cccccccccccccccccccccccccccccccccccc
Confidence 468999999999999999999995 677788886100 11112222232 24679999999999999987643
No 242
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.71 E-value=6.7e-08 Score=64.32 Aligned_cols=54 Identities=11% Similarity=0.114 Sum_probs=43.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~ 71 (91)
..++++||||+|+||++++++|.++|++|++++|+.... . ...+.++.+|+.|+
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----------~-~~~~~~~~~D~~~~ 57 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----------L-SGNFHFLQLDLSDD 57 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----------c-CCcEEEEECChHHH
Confidence 457899999999999999999999999999999864211 0 12467788888876
No 243
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.70 E-value=1.3e-07 Score=64.62 Aligned_cols=77 Identities=10% Similarity=-0.038 Sum_probs=53.7
Q ss_pred CCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506 4 KNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 4 ~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++..+.++|||| ++.||.+++++|+++|++|++..|... ..+. ..++.. .....+++|++|++.+.+.+.
T Consensus 3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 76 (261)
T PRK08690 3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDK---LEER---VRKMAAELDSELVFRCDVASDDEINQVFA 76 (261)
T ss_pred ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHH---HHHH---HHHHHhccCCceEEECCCCCHHHHHHHHH
Confidence 356678999997 679999999999999999998876421 0111 122211 134578999999999998764
Q ss_pred hhhhhhh
Q 037506 80 RSGRSLG 86 (91)
Q Consensus 80 ~~~~~~~ 86 (91)
..-...|
T Consensus 77 ~~~~~~g 83 (261)
T PRK08690 77 DLGKHWD 83 (261)
T ss_pred HHHHHhC
Confidence 4333333
No 244
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=98.70 E-value=1.6e-07 Score=64.55 Aligned_cols=67 Identities=16% Similarity=0.131 Sum_probs=52.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
.|-++|||||+.||.++++.|.++|++|++..|+. ++.+. ..++....+.++..|++|.+++.+++.
T Consensus 6 ~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~------drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~ 73 (246)
T COG4221 6 GKVALITGASSGIGEATARALAEAGAKVVLAARRE------ERLEALADEIGAGAALALALDVTDRAAVEAAIE 73 (246)
T ss_pred CcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccH------HHHHHHHHhhccCceEEEeeccCCHHHHHHHHH
Confidence 46789999999999999999999999999999974 33322 223332357889999999999877654
No 245
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=98.70 E-value=6.1e-08 Score=65.72 Aligned_cols=67 Identities=13% Similarity=0.094 Sum_probs=49.9
Q ss_pred eEEEEcCCchHHHHHHHHHHh----CCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHHhh
Q 037506 9 KKLIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++||||++.||.+++++|.+ .|++|+++.|+.... ......+. ...+.++.+|++|++.+++.+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~-----~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~ 76 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEAL-----RQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKA 76 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHH-----HHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHH
Confidence 589999999999999999997 799999999974221 11112222 22478899999999988886533
No 246
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=98.70 E-value=1.5e-07 Score=64.18 Aligned_cols=79 Identities=10% Similarity=-0.035 Sum_probs=54.2
Q ss_pred CCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..+.++||||+ +-||..++++|.++|++|++..|+.... ...+....+.. ..+.++.+|++|++++.+.+..
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 80 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKG---RFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFET 80 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccc---hHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHH
Confidence 455789999986 7999999999999999998887653211 01111222221 2356889999999999887644
Q ss_pred hhhhhh
Q 037506 81 SGRSLG 86 (91)
Q Consensus 81 ~~~~~~ 86 (91)
.-..+|
T Consensus 81 ~~~~~g 86 (258)
T PRK07370 81 IKQKWG 86 (258)
T ss_pred HHHHcC
Confidence 333333
No 247
>PLN02996 fatty acyl-CoA reductase
Probab=98.69 E-value=9.9e-08 Score=71.07 Aligned_cols=38 Identities=21% Similarity=0.392 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQ 43 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~ 43 (91)
..++|+|||||||+|+++++.|++.+ .+|+++.|....
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~ 50 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDA 50 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCC
Confidence 45789999999999999999999865 368999997653
No 248
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=98.69 E-value=2.6e-07 Score=57.95 Aligned_cols=69 Identities=22% Similarity=0.277 Sum_probs=48.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~ 78 (91)
++++|+||+|+||.+++++|.++|+ .|+++.|+.... ......+..+. ...+.++.+|+++++.+.+.+
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 72 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDA--PGAAELLAELEALGAEVTVVACDVADRAALAAAL 72 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCC--ccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 4689999999999999999999986 677788864322 11111112222 235678899999988887764
No 249
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=1.1e-07 Score=65.49 Aligned_cols=74 Identities=12% Similarity=-0.014 Sum_probs=53.4
Q ss_pred CCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 2 EGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 2 ~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
++++..+.++||||+ +.||..++++|.++|++|++..|+... .++.+.+ ..+ ....++++|++|++++++.+
T Consensus 5 ~~~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~---~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~ 79 (272)
T PRK08159 5 SGLMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDAL---KKRVEPLAAEL--GAFVAGHCDVTDEASIDAVF 79 (272)
T ss_pred cccccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHH---HHHHHHHHHhc--CCceEEecCCCCHHHHHHHH
Confidence 466777899999997 789999999999999999888775210 1111111 111 13567899999999998875
Q ss_pred hh
Q 037506 79 MR 80 (91)
Q Consensus 79 ~~ 80 (91)
..
T Consensus 80 ~~ 81 (272)
T PRK08159 80 ET 81 (272)
T ss_pred HH
Confidence 43
No 250
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.68 E-value=1.2e-07 Score=65.50 Aligned_cols=76 Identities=17% Similarity=0.073 Sum_probs=53.2
Q ss_pred CCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHhhhh
Q 037506 6 TKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRMRSG 82 (91)
Q Consensus 6 ~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~~~~ 82 (91)
..+.++||||+ +.||..+++.|.++|++|++..|+... .+....+ ..+. .. .++.+|++|++++.+.+....
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~---~~~~~~~~~~~~-~~-~~~~~Dv~d~~~v~~~~~~i~ 78 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEAL---KKRVEPIAQELG-SD-YVYELDVSKPEHFKSLAESLK 78 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHH---HHHHHHHHHhcC-Cc-eEEEecCCCHHHHHHHHHHHH
Confidence 45789999997 789999999999999999998886310 1111111 1122 12 578999999999988764443
Q ss_pred hhhh
Q 037506 83 RSLG 86 (91)
Q Consensus 83 ~~~~ 86 (91)
..+|
T Consensus 79 ~~~g 82 (274)
T PRK08415 79 KDLG 82 (274)
T ss_pred HHcC
Confidence 3344
No 251
>PLN02780 ketoreductase/ oxidoreductase
Probab=98.66 E-value=6.6e-08 Score=68.28 Aligned_cols=58 Identities=21% Similarity=0.123 Sum_probs=43.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHH-hhhhc----CCCeEEEEeeCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEI-HKEFQ----GIGVTIIENLCDV 70 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~-~~~l~----~~~v~~v~gDl~d 70 (91)
.+.++|||||+.||.+++++|.++|++|++++|+.. +.+. ..++. ...+..+.+|+++
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~------~l~~~~~~l~~~~~~~~~~~~~~Dl~~ 115 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPD------KLKDVSDSIQSKYSKTQIKTVVVDFSG 115 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHH------HHHHHHHHHHHHCCCcEEEEEEEECCC
Confidence 578999999999999999999999999999999742 2211 12221 1246778899985
No 252
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=98.65 E-value=7.1e-08 Score=66.63 Aligned_cols=32 Identities=28% Similarity=0.508 Sum_probs=28.7
Q ss_pred EEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
|+|||||||||+++++.|.++|+ +|.+++|..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~ 33 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLR 33 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCC
Confidence 68999999999999999999997 788887654
No 253
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=98.64 E-value=5.1e-08 Score=67.59 Aligned_cols=32 Identities=25% Similarity=0.525 Sum_probs=28.5
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|||||||||++|+++|++.|++++++.|+.
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~ 33 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNL 33 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCC
Confidence 89999999999999999999999877776653
No 254
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.62 E-value=1.9e-07 Score=63.75 Aligned_cols=79 Identities=13% Similarity=0.005 Sum_probs=54.0
Q ss_pred CCCCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 3 GKNTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 3 ~~~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+++..+.++|||| ++-||.+++++|+++|++|++..|.... .++...+ ..+ ....++.+|++|++++.+.+.
T Consensus 2 ~~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 2 GFLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRF---KDRITEFAAEF--GSDLVFPCDVASDEQIDALFA 76 (260)
T ss_pred CccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHH---HHHHHHHHHhc--CCcceeeccCCCHHHHHHHHH
Confidence 4466788999996 6799999999999999999988764211 1222111 111 123468899999999998764
Q ss_pred hhhhhhh
Q 037506 80 RSGRSLG 86 (91)
Q Consensus 80 ~~~~~~~ 86 (91)
......|
T Consensus 77 ~~~~~~g 83 (260)
T PRK06997 77 SLGQHWD 83 (260)
T ss_pred HHHHHhC
Confidence 4433334
No 255
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.61 E-value=5.4e-07 Score=60.48 Aligned_cols=79 Identities=13% Similarity=0.112 Sum_probs=55.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC----CCeEEEEeeCCC-hhhhhHHH
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG----IGVTIIENLCDV-GQVTSSQR 78 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~----~~v~~v~gDl~d-~~~l~~~~ 78 (91)
.+.++.++||||++.||..+++.|.++|+.|++..|..... ..+....... ..+.+...|+++ .+.++..+
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~ 77 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEE----AAEALAAAIKEAGGGRAAAVAADVSDDEESVEALV 77 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchh----hHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHH
Confidence 35678899999999999999999999999999888864310 1111111112 256778899998 88888776
Q ss_pred hhhhhhhh
Q 037506 79 MRSGRSLG 86 (91)
Q Consensus 79 ~~~~~~~~ 86 (91)
...-...|
T Consensus 78 ~~~~~~~g 85 (251)
T COG1028 78 AAAEEEFG 85 (251)
T ss_pred HHHHHHcC
Confidence 44433333
No 256
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.61 E-value=9.8e-08 Score=69.00 Aligned_cols=62 Identities=16% Similarity=0.309 Sum_probs=44.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHh---------hhhcCCCeEEEEeeCCCh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIH---------KEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~---------~~l~~~~v~~v~gDl~d~ 71 (91)
+++|+||||||+|.+++..|+.+- .+|++++|..+.. ....+.. .+....+++++.||+..+
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E--~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~ 72 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDE--AALARLEKTFDLYRHWDELSADRVEVVAGDLAEP 72 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHH--HHHHHHHHHhhhhhhhhhhhcceEEEEecccccc
Confidence 479999999999999999999865 4999999976411 0111111 123345789999999843
No 257
>PRK06940 short chain dehydrogenase; Provisional
Probab=98.61 E-value=2.8e-07 Score=63.39 Aligned_cols=66 Identities=12% Similarity=0.144 Sum_probs=47.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++.++|||+ |+||++++++|. +|++|++++|+... .......+.. ..+.++.+|++|++.+.+.+.
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~ 69 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEEN-----LEAAAKTLREAGFDVSTQEVDVSSRESVKALAA 69 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHH-----HHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHH
Confidence 356889998 689999999995 89999999986421 1111122222 247789999999999988753
No 258
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.60 E-value=4.1e-07 Score=66.45 Aligned_cols=68 Identities=12% Similarity=0.120 Sum_probs=50.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
..++++||||+|.||..+++.|.++|++|++++|... .+...... ...+..++.+|++|++.+.+.+.
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~----~~~l~~~~--~~~~~~~~~~Dv~~~~~~~~~~~ 276 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAA----GEALAAVA--NRVGGTALALDITAPDAPARIAE 276 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCcc----HHHHHHHH--HHcCCeEEEEeCCCHHHHHHHHH
Confidence 3478999999999999999999999999999988532 11111111 11245788999999998887653
No 259
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.60 E-value=1.5e-07 Score=66.82 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=55.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+..+.++||||+..||...++.|..+|.+|+...|+.... ...+...........+.++++|+.|..+++++...
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~-~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERG-EEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHH
Confidence 3456899999999999999999999999999999985321 00111111123344678899999999999997543
No 260
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=98.58 E-value=2.6e-07 Score=64.41 Aligned_cols=69 Identities=17% Similarity=0.116 Sum_probs=52.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh----cCCCeEEEEeeCCChhhhhHHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF----QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
-.||||-||.=|++|++.|+..||+|..+.|.++.. +..+.+++-.- .....++.++|++|...+.+.+
T Consensus 30 vALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsF-NT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I 102 (376)
T KOG1372|consen 30 VALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSF-NTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLI 102 (376)
T ss_pred EEEEecccCCCchHHHHHHHhCCceeeEEEeecccc-chhhhhhhhcCchhcccceeEEeeccccchHHHHHHH
Confidence 458999999999999999999999999999987765 33333332111 1124688999999999888754
No 261
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.57 E-value=4.7e-07 Score=59.15 Aligned_cols=71 Identities=15% Similarity=0.196 Sum_probs=50.8
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcC--CCeEEEEeeCCChhhhhHHHhhh
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQG--IGVTIIENLCDVGQVTSSQRMRS 81 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~--~~v~~v~gDl~d~~~l~~~~~~~ 81 (91)
.++||||+|.+|..+++.|.+++ .+++++.|..... ++....+..+.. ..+.++.+|++|++.+.+.+...
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~--~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~ 75 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPS--AEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQL 75 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGS--TTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTS
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCcc--HHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHH
Confidence 48999999999999999999998 4788888873221 233334444443 34788899999999999986543
No 262
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=98.55 E-value=3.3e-07 Score=63.86 Aligned_cols=34 Identities=26% Similarity=0.440 Sum_probs=31.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|||||||++||+|++|.++|.++|++|+.+.|..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~ 34 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD 34 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh
Confidence 6899999999999999999999999999998764
No 263
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=98.53 E-value=1.8e-07 Score=65.94 Aligned_cols=65 Identities=15% Similarity=0.205 Sum_probs=45.7
Q ss_pred EEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhh----cCCCeE----EEEeeCCChhhhhHHHh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEF----QGIGVT----IIENLCDVGQVTSSQRM 79 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l----~~~~v~----~v~gDl~d~~~l~~~~~ 79 (91)
||||||+|.||+.|+++|++.+ .++++++|+... ......++ ...+++ ++.+|++|.+.+...+.
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~-----l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~ 74 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENK-----LYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFE 74 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHH-----HHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhH-----HHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHh
Confidence 7999999999999999999988 689999997421 11111223 223443 45899999999998764
No 264
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.51 E-value=5.9e-07 Score=65.46 Aligned_cols=67 Identities=16% Similarity=0.111 Sum_probs=54.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+|+|+|+|+ |+||+.++..|.+++ ++|++.+|+. ++...+......+++..+.|+.|.+.+.+.+.+
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~------~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~ 68 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSK------EKCARIAELIGGKVEALQVDAADVDALVALIKD 68 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCH------HHHHHHHhhccccceeEEecccChHHHHHHHhc
Confidence 578999999 999999999999998 9999999974 344444333334789999999999998887654
No 265
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=98.50 E-value=1.3e-07 Score=65.12 Aligned_cols=30 Identities=20% Similarity=0.389 Sum_probs=26.6
Q ss_pred EEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 11 LIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 11 lItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
||||||||||++|+++|++.|++|+++.+.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~ 30 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH 30 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc
Confidence 699999999999999999999988776543
No 266
>PRK07578 short chain dehydrogenase; Provisional
Probab=98.50 E-value=5.3e-07 Score=58.95 Aligned_cols=33 Identities=24% Similarity=0.422 Sum_probs=30.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+++||||+|.||.+++++|.++ ++|++++|+.
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~ 33 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSS 33 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCC
Confidence 47999999999999999999999 9999999863
No 267
>PLN00015 protochlorophyllide reductase
Probab=98.49 E-value=3.3e-07 Score=64.07 Aligned_cols=64 Identities=16% Similarity=0.048 Sum_probs=48.0
Q ss_pred EEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhhhhc--CCCeEEEEeeCCChhhhhHHHh
Q 037506 11 LIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHKEFQ--GIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 11 lItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~~l~--~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
+||||++.||.+++++|+++| ++|++..|+... .......+. ...+.++.+|+.|.+++++.+.
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~-----~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~ 67 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLK-----AERAAKSAGMPKDSYTVMHLDLASLDSVRQFVD 67 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHH-----HHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHH
Confidence 599999999999999999999 999999886421 111112222 2247788999999999988753
No 268
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=98.42 E-value=7e-07 Score=67.44 Aligned_cols=71 Identities=11% Similarity=0.103 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCCCCCCCcchHHHhh-hhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~~~~~~~~~~~~~~-~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
..|+|+||||+|-||+.+|+++++.+ -++++++|+..+. ..-...+. .++...+.++-||+.|.+.+.+++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~--~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~ 321 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKL--YLIDMELREKFPELKLRFYIGDVRDRDRVERAM 321 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHH--HHHHHHHHhhCCCcceEEEecccccHHHHHHHH
Confidence 46799999999999999999999987 6788888875432 11111111 112356889999999999999975
No 269
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=98.41 E-value=1.3e-06 Score=59.12 Aligned_cols=68 Identities=18% Similarity=0.145 Sum_probs=52.5
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+....||||||+..||..++++|++.|.+|++..|+. ++...... ..+.+.-..+|+.|.++.++.+
T Consensus 2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e------~~L~e~~~-~~p~~~t~v~Dv~d~~~~~~lv 69 (245)
T COG3967 2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNE------ERLAEAKA-ENPEIHTEVCDVADRDSRRELV 69 (245)
T ss_pred cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcH------HHHHHHHh-cCcchheeeecccchhhHHHHH
Confidence 34556899999999999999999999999999999974 22222221 2346777889999998877753
No 270
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.38 E-value=1.6e-06 Score=60.09 Aligned_cols=35 Identities=20% Similarity=0.283 Sum_probs=32.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ 43 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (91)
|+|+|+||||. |+.+++.|.+.||+|++.++...+
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~ 35 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEG 35 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCc
Confidence 58999999999 999999999999999999987643
No 271
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=98.36 E-value=2.9e-06 Score=58.04 Aligned_cols=78 Identities=17% Similarity=0.137 Sum_probs=55.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCCCCCCCcchH-HHh--hhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPVTQNSRPSKL-EIH--KEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~~~~~~~~~~-~~~--~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|+++.|+||||...||..|+++|++. +-++++..+.. |+++ ..+ .....+++++++.|++..+++..+..+
T Consensus 1 Mspksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~-----~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~ 75 (249)
T KOG1611|consen 1 MSPKSVFITGANRGIGLGLVKELLKDKGIEVIIATARD-----PEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQE 75 (249)
T ss_pred CCCccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCC-----hHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHH
Confidence 56677999999999999999999974 45555555431 2332 111 122356899999999999999998766
Q ss_pred hhhhhhc
Q 037506 81 SGRSLGH 87 (91)
Q Consensus 81 ~~~~~~~ 87 (91)
=....|.
T Consensus 76 V~~iVg~ 82 (249)
T KOG1611|consen 76 VEKIVGS 82 (249)
T ss_pred HHhhccc
Confidence 4444443
No 272
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.31 E-value=3.1e-06 Score=57.92 Aligned_cols=68 Identities=18% Similarity=0.163 Sum_probs=54.0
Q ss_pred CCCCCCCCeEEEEcC-CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHH
Q 037506 1 MEGKNTKPKKLIFGG-TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 1 ~~~~~~~~~ilItGa-tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~ 77 (91)
||-....+.|+|||+ +|.||-+|++.+.+.|+.|.+..|..++- ..+. +.+++..+.|+++++.+...
T Consensus 1 ~e~~~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M---------~~L~~~~gl~~~kLDV~~~~~V~~v 70 (289)
T KOG1209|consen 1 SELQSQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPM---------AQLAIQFGLKPYKLDVSKPEEVVTV 70 (289)
T ss_pred CCcccCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchH---------hhHHHhhCCeeEEeccCChHHHHHH
Confidence 444556789999985 68999999999999999999999976432 1122 34789999999999988875
No 273
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=98.31 E-value=8.8e-07 Score=67.73 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=28.3
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEE
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTF 35 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~ 35 (91)
+..|+||||||+||||++|++.|.++|++|.
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~ 408 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYE 408 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEE
Confidence 4567999999999999999999999999984
No 274
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=98.26 E-value=2.5e-06 Score=69.36 Aligned_cols=62 Identities=15% Similarity=0.269 Sum_probs=43.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCCCCCCCcchHHHhh-hh---------cCCCeEEEEeeCCCh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPVTQNSRPSKLEIHK-EF---------QGIGVTIIENLCDVG 71 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~~~~~~~~~~~~~~-~l---------~~~~v~~v~gDl~d~ 71 (91)
.++|+|||||||+|++++++|++++ ++|+++.|..... +....+. .+ ...+++++.+|+.++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~---~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEE---AGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChH---HHHHHHHHHHHHhCCCchhhhcceEEEeccCCCc
Confidence 4789999999999999999999876 8899999965321 1111111 00 012688999999754
No 275
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.25 E-value=1e-05 Score=53.24 Aligned_cols=68 Identities=12% Similarity=0.175 Sum_probs=49.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhhc-CCCeEEEEeeCCChhhhhHHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEFQ-GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l~-~~~v~~v~gDl~d~~~l~~~~ 78 (91)
...++++|+||+|.+|+.+++.|.+.|++|+++.|+. ++...+ ..+. ..+.++...|..+.+.+.+.+
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~------~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 95 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDL------ERAQKAADSLRARFGEGVGAVETSDDAARAAAI 95 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH------HHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHH
Confidence 4567999999999999999999999999999999864 222221 1121 124556677888877776654
No 276
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.25 E-value=4.5e-06 Score=57.29 Aligned_cols=79 Identities=16% Similarity=0.149 Sum_probs=56.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
..+++++||+.|.||..+..+|+++|..+.++.-+..+. ...+++....+...+.|+++|+++...++.++-.=..-+
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~--~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~f 81 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENP--EAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATF 81 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCH--HHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHh
Confidence 357899999999999999999999998888776543321 112222222334568899999999999988864444444
Q ss_pred h
Q 037506 86 G 86 (91)
Q Consensus 86 ~ 86 (91)
|
T Consensus 82 g 82 (261)
T KOG4169|consen 82 G 82 (261)
T ss_pred C
Confidence 4
No 277
>PRK09620 hypothetical protein; Provisional
Probab=98.20 E-value=3.9e-06 Score=57.24 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=32.3
Q ss_pred CCCeEEEEcCC----------------chHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGT----------------GYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGat----------------G~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+||+|. ||+|++++++|+++|++|+++++..
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~ 53 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYF 53 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 45789999885 9999999999999999999998754
No 278
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=98.19 E-value=9e-06 Score=55.20 Aligned_cols=65 Identities=17% Similarity=0.288 Sum_probs=50.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|+++|+|+ |.+|.++++.|.+.||+|++++++. ++...... .......+.+|-+|++.++++-.+
T Consensus 1 m~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~------~~~~~~~~-~~~~~~~v~gd~t~~~~L~~agi~ 65 (225)
T COG0569 1 MKIIIIGA-GRVGRSVARELSEEGHNVVLIDRDE------ERVEEFLA-DELDTHVVIGDATDEDVLEEAGID 65 (225)
T ss_pred CEEEEECC-cHHHHHHHHHHHhCCCceEEEEcCH------HHHHHHhh-hhcceEEEEecCCCHHHHHhcCCC
Confidence 57899998 9999999999999999999999974 22221111 124678999999999999887444
No 279
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.19 E-value=1.5e-05 Score=56.25 Aligned_cols=69 Identities=12% Similarity=0.055 Sum_probs=52.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+...|+||||++.+|+.++.++.++|..+.+.+.+..+. .+..+..... ..+..+.+|++|.+.+.+..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~--~etv~~~~~~--g~~~~y~cdis~~eei~~~a 105 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGN--EETVKEIRKI--GEAKAYTCDISDREEIYRLA 105 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccch--HHHHHHHHhc--CceeEEEecCCCHHHHHHHH
Confidence 456799999999999999999999999888998876443 2222222221 14788999999999888764
No 280
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.17 E-value=9.1e-06 Score=56.58 Aligned_cols=77 Identities=14% Similarity=0.096 Sum_probs=54.7
Q ss_pred CCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhh--hcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 3 GKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKE--FQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 3 ~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~--l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.....+.++|||++.-||..+++.|.+.|.+|++..|+.... .+....+.. .....+..+.+|+++.+.+++....
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~--~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~ 81 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERL--EETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF 81 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH--HHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence 345678899999999999999999999999999999975321 000100011 1123478899999998888876433
Q ss_pred h
Q 037506 81 S 81 (91)
Q Consensus 81 ~ 81 (91)
.
T Consensus 82 ~ 82 (270)
T KOG0725|consen 82 A 82 (270)
T ss_pred H
Confidence 3
No 281
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=98.14 E-value=7.4e-06 Score=58.16 Aligned_cols=65 Identities=18% Similarity=0.230 Sum_probs=50.3
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCC-CeEEEEeeCCChhhhhHHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGI-GVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~-~v~~v~gDl~d~~~l~~~~ 78 (91)
-..|+|||||+|++++..|.+.|-+|++-.|... ....+++.+.+. .+-+..-|+.|++++++++
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~-----~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vv 128 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDE-----YDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVV 128 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCc-----cchhheeecccccceeeeccCCCCHHHHHHHH
Confidence 4579999999999999999999999999998642 222233333332 4678899999999999975
No 282
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=98.13 E-value=1e-05 Score=48.85 Aligned_cols=61 Identities=20% Similarity=0.304 Sum_probs=46.4
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
|+|+|. |.+|..+++.|.+.+++|+++++++ +.. ..+...++.++.||.+|++.++++-..
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~------~~~---~~~~~~~~~~i~gd~~~~~~l~~a~i~ 61 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDP------ERV---EELREEGVEVIYGDATDPEVLERAGIE 61 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSH------HHH---HHHHHTTSEEEES-TTSHHHHHHTTGG
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCc------HHH---HHHHhcccccccccchhhhHHhhcCcc
Confidence 578888 8999999999999777999999863 332 233345789999999999999886433
No 283
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.13 E-value=6.1e-06 Score=58.47 Aligned_cols=65 Identities=25% Similarity=0.268 Sum_probs=48.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHh-hhh---cCCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIH-KEF---QGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~-~~l---~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.=..|||||..||+..+++|.++|++|.++.|+.+ |++.. +++ ....++++..|+++++.+.+.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~------KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i 118 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQE------KLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKL 118 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHH------HHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHH
Confidence 44689999999999999999999999999999853 33221 112 2235788999999877644443
No 284
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=98.10 E-value=1e-05 Score=60.19 Aligned_cols=67 Identities=15% Similarity=0.285 Sum_probs=45.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCCCCCCCcchH------HHhhhhcC------CCeEEEEeeCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPVTQNSRPSKL------EIHKEFQG------IGVTIIENLCDV 70 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~~~~~~~~~~------~~~~~l~~------~~v~~v~gDl~d 70 (91)
..+.|+|||||||+|.-+++.|++.. .+++++.|...+.+..++. +.+..+.. .++..+.||+.+
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~ 90 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISE 90 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccC
Confidence 45789999999999999999999864 4788889987654111111 11111111 256788899987
Q ss_pred hh
Q 037506 71 GQ 72 (91)
Q Consensus 71 ~~ 72 (91)
++
T Consensus 91 ~~ 92 (467)
T KOG1221|consen 91 PD 92 (467)
T ss_pred cc
Confidence 54
No 285
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.10 E-value=2e-05 Score=52.56 Aligned_cols=72 Identities=15% Similarity=0.013 Sum_probs=55.8
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+.....+.|++||+.-.||+.++..|.+.|.+|+++.|+. +....+-...+.-++.+.+|+.+.+.+++.+
T Consensus 1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~------a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l 72 (245)
T KOG1207|consen 1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNE------ANLLSLVKETPSLIIPIVGDLSAWEALFKLL 72 (245)
T ss_pred CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCH------HHHHHHHhhCCcceeeeEecccHHHHHHHhh
Confidence 44455678899999999999999999999999999999974 2332222223334899999999988888865
No 286
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=98.07 E-value=1.8e-05 Score=57.78 Aligned_cols=61 Identities=15% Similarity=0.185 Sum_probs=47.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
|+|+|+|+ |.+|.++++.|.+.|++|+++++++ ++.+.+.. ..+++++.+|.+++..+.++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~------~~~~~~~~--~~~~~~~~gd~~~~~~l~~~ 61 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDE------ERLRRLQD--RLDVRTVVGNGSSPDVLREA 61 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCH------HHHHHHHh--hcCEEEEEeCCCCHHHHHHc
Confidence 58999998 9999999999999999999999864 22222111 24688999999988877765
No 287
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=98.05 E-value=1.7e-05 Score=58.25 Aligned_cols=38 Identities=24% Similarity=0.385 Sum_probs=34.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
+..+.|+|+||||.+|+.+++.|+++|+.|++++|+..
T Consensus 77 ~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~ 114 (411)
T KOG1203|consen 77 KKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQ 114 (411)
T ss_pred CCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChh
Confidence 44578999999999999999999999999999999853
No 288
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=98.00 E-value=1.3e-05 Score=56.32 Aligned_cols=34 Identities=26% Similarity=0.277 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|+|||||++|++|..|+++|. .+++|++++|..-
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~~ 34 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAEL 34 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCccc
Confidence 459999999999999999998 7799999998763
No 289
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=97.97 E-value=4.6e-05 Score=54.90 Aligned_cols=62 Identities=18% Similarity=0.191 Sum_probs=44.5
Q ss_pred EEEEcCCchHHHHHHHHHHhCC-C-cEEEEecCCCCCCCcchHHHhh-hhcCCCeEEEEeeCCChhhhhHHH
Q 037506 10 KLIFGGTGYLGKYMVKASVSSG-H-NTFVYARPVTQNSRPSKLEIHK-EFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g-~-~V~~~~R~~~~~~~~~~~~~~~-~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
|+|+|+ |++|+.+++.|.++. + +|++.+|+. ++.+.+. .+...++++++.|+.|.+++.+.+
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~------~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~ 65 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNP------EKAERLAEKLLGDRVEAVQVDVNDPESLAELL 65 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSH------HHHHHHHT--TTTTEEEEE--TTTHHHHHHHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCH------HHHHHHHhhccccceeEEEEecCCHHHHHHHH
Confidence 789999 999999999999886 4 899999974 3333222 223457999999999999988864
No 290
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=97.96 E-value=3.3e-05 Score=52.30 Aligned_cols=76 Identities=12% Similarity=0.100 Sum_probs=57.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcC-CCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQG-IGVTIIENLCDVGQVTSSQRMRSGRS 84 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~-~~v~~v~gDl~d~~~l~~~~~~~~~~ 84 (91)
..+..+||||+..||++++..|.+.|++|.+.++++... ......+.. .+-..+.+|+.++..++..+...-+.
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A-----~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAA-----EATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhH-----HHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 346789999999999999999999999999999876432 112233333 24567899999999998877666666
Q ss_pred hh
Q 037506 85 LG 86 (91)
Q Consensus 85 ~~ 86 (91)
||
T Consensus 88 ~g 89 (256)
T KOG1200|consen 88 LG 89 (256)
T ss_pred cC
Confidence 66
No 291
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=97.90 E-value=6e-05 Score=55.23 Aligned_cols=61 Identities=18% Similarity=0.238 Sum_probs=46.9
Q ss_pred CCCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeC
Q 037506 5 NTKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLC 68 (91)
Q Consensus 5 ~~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl 68 (91)
+..++++|||| ||.+|.+++++|.++|++|++++++.... . ..+ +...|+
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~~-----------~-~~~--~~~~dv 251 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNLP-----------T-PAG--VKRIDV 251 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcccc-----------C-CCC--cEEEcc
Confidence 56689999999 99999999999999999999999864210 0 112 345688
Q ss_pred CChhhhhHHHh
Q 037506 69 DVGQVTSSQRM 79 (91)
Q Consensus 69 ~d~~~l~~~~~ 79 (91)
++.+++.+++.
T Consensus 252 ~~~~~~~~~v~ 262 (399)
T PRK05579 252 ESAQEMLDAVL 262 (399)
T ss_pred CCHHHHHHHHH
Confidence 88888877653
No 292
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=97.89 E-value=2.3e-05 Score=53.32 Aligned_cols=27 Identities=26% Similarity=0.474 Sum_probs=25.0
Q ss_pred CCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 15 GTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 15 atG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+|||+|++++++|+++||+|+++.|+.
T Consensus 24 SSG~iG~aLA~~L~~~G~~V~li~r~~ 50 (229)
T PRK06732 24 STGQLGKIIAETFLAAGHEVTLVTTKT 50 (229)
T ss_pred cchHHHHHHHHHHHhCCCEEEEEECcc
Confidence 689999999999999999999999764
No 293
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=97.89 E-value=3.7e-05 Score=58.07 Aligned_cols=63 Identities=11% Similarity=0.227 Sum_probs=50.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.+|+|+|. |.+|+.+++.|.++|++|+++++++ ++.+. .++.+...+.||.+|++.++++-..
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~------~~~~~---~~~~g~~~i~GD~~~~~~L~~a~i~ 480 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSR------TRVDE---LRERGIRAVLGNAANEEIMQLAHLD 480 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCH------HHHHH---HHHCCCeEEEcCCCCHHHHHhcCcc
Confidence 57899998 9999999999999999999999863 33332 2335789999999999988876433
No 294
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=97.88 E-value=0.00015 Score=53.19 Aligned_cols=79 Identities=14% Similarity=0.095 Sum_probs=52.5
Q ss_pred CCeEEEEcCCchHHHH--HHHHHHhCCCcEEEEecCCCCCCCc-------chHHHhhhhcC--CCeEEEEeeCCChhhhh
Q 037506 7 KPKKLIFGGTGYLGKY--MVKASVSSGHNTFVYARPVTQNSRP-------SKLEIHKEFQG--IGVTIIENLCDVGQVTS 75 (91)
Q Consensus 7 ~~~ilItGatG~iG~~--l~~~Ll~~g~~V~~~~R~~~~~~~~-------~~~~~~~~l~~--~~v~~v~gDl~d~~~l~ 75 (91)
.|+++|||+++.+|.+ +++.| +.|.+|.++++........ ........... ..+..+.+|+++++.+.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 5789999999999999 89999 9999988888532111000 00011111122 23567899999999998
Q ss_pred HHHhhhhhhhh
Q 037506 76 SQRMRSGRSLG 86 (91)
Q Consensus 76 ~~~~~~~~~~~ 86 (91)
+.+..-...+|
T Consensus 120 ~lie~I~e~~G 130 (398)
T PRK13656 120 KVIELIKQDLG 130 (398)
T ss_pred HHHHHHHHhcC
Confidence 87655555555
No 295
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.86 E-value=5.9e-05 Score=53.88 Aligned_cols=35 Identities=17% Similarity=0.179 Sum_probs=29.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCc---EEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHN---TFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~---V~~~~R~~ 41 (91)
+++|+|+||||++|+.+++.|.+++|+ +..+.+..
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~ 38 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR 38 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence 368999999999999999999998775 47777654
No 296
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=97.82 E-value=0.00012 Score=53.46 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+++|+|+|+ |.+|..+++.|.+.|++|+++++++ ++.+.+... ..++.++.||.++++.+.++-
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~------~~~~~~~~~-~~~~~~i~gd~~~~~~L~~~~ 294 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDP------ERAEELAEE-LPNTLVLHGDGTDQELLEEEG 294 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH------HHHHHHHHH-CCCCeEEECCCCCHHHHHhcC
Confidence 3578999999 9999999999999999999999864 332222211 136788999999998887654
No 297
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=97.80 E-value=0.00022 Score=50.86 Aligned_cols=76 Identities=13% Similarity=0.096 Sum_probs=57.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMRSGRS 84 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~~~~ 84 (91)
+.+-|+|||+-...|..++.+|.+.|+.|.+-.-.+.+ ++.+.... .++...++-|++++++++++..-=...
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~g------ae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEG------AESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCch------HHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHh
Confidence 45679999999999999999999999999998844322 22222222 457788899999999999986444445
Q ss_pred hhc
Q 037506 85 LGH 87 (91)
Q Consensus 85 ~~~ 87 (91)
|++
T Consensus 102 l~~ 104 (322)
T KOG1610|consen 102 LGE 104 (322)
T ss_pred ccc
Confidence 554
No 298
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=97.80 E-value=6.3e-05 Score=57.49 Aligned_cols=64 Identities=16% Similarity=0.217 Sum_probs=51.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
.++|+|+|. |.+|+.+++.|.++|++++++++++ ++.+ ..+..+..+++||.+|++.++++-.+
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~------~~v~---~~~~~g~~v~~GDat~~~~L~~agi~ 463 (601)
T PRK03659 400 KPQVIIVGF-GRFGQVIGRLLMANKMRITVLERDI------SAVN---LMRKYGYKVYYGDATQLELLRAAGAE 463 (601)
T ss_pred cCCEEEecC-chHHHHHHHHHHhCCCCEEEEECCH------HHHH---HHHhCCCeEEEeeCCCHHHHHhcCCc
Confidence 468999998 9999999999999999999999863 3333 23345789999999999988876433
No 299
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.79 E-value=4.5e-05 Score=54.86 Aligned_cols=38 Identities=21% Similarity=0.300 Sum_probs=32.1
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhC-C-CcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSS-G-HNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~-g-~~V~~~~R~~ 41 (91)
..+.++|+||||+|+||+.++++|.++ + .+++++.|+.
T Consensus 152 ~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~ 191 (340)
T PRK14982 152 DLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQ 191 (340)
T ss_pred CcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCH
Confidence 356789999999999999999999864 4 6888888863
No 300
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=97.78 E-value=9.5e-05 Score=56.77 Aligned_cols=62 Identities=19% Similarity=0.281 Sum_probs=50.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.++|+|+|. |.+|+.+++.|.++|+++++++.++ ++.+. +...+.++++||.+|++.++++-
T Consensus 400 ~~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~------~~v~~---~~~~g~~v~~GDat~~~~L~~ag 461 (621)
T PRK03562 400 QPRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDP------DHIET---LRKFGMKVFYGDATRMDLLESAG 461 (621)
T ss_pred cCcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCH------HHHHH---HHhcCCeEEEEeCCCHHHHHhcC
Confidence 468999999 9999999999999999999999864 33332 33357899999999999888753
No 301
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.77 E-value=9.6e-05 Score=54.05 Aligned_cols=61 Identities=15% Similarity=0.127 Sum_probs=42.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDV 70 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d 70 (91)
+..++++|+|+++ +|..+++.|.+.|++|+++++.... ...+....+...+++++.+|..+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~----~~~~~~~~l~~~~~~~~~~~~~~ 63 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEED----QLKEALEELGELGIELVLGEYPE 63 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchH----HHHHHHHHHHhcCCEEEeCCcch
Confidence 5568999999966 9999999999999999999986421 11111222333356666666554
No 302
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=97.77 E-value=6.9e-05 Score=50.29 Aligned_cols=67 Identities=13% Similarity=0.167 Sum_probs=48.1
Q ss_pred cCC--chHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc-CCCeEEEEeeCCChhhhhHHHhhhhhhh
Q 037506 14 GGT--GYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ-GIGVTIIENLCDVGQVTSSQRMRSGRSL 85 (91)
Q Consensus 14 Gat--G~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~-~~~v~~v~gDl~d~~~l~~~~~~~~~~~ 85 (91)
|++ +-||..++++|+++|++|++.+|+... ....+..+. ..+.+++.+|++|++.+.+.+.......
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 70 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEK-----LADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERF 70 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHH-----HHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHH-----HHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhc
Confidence 566 899999999999999999999997421 111122221 2345689999999999999865544444
No 303
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=97.77 E-value=5.9e-05 Score=50.67 Aligned_cols=34 Identities=26% Similarity=0.400 Sum_probs=31.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+||+|.+|+.++..|.+.||+|++.+|+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~ 34 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDL 34 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCH
Confidence 5799999999999999999999999999998864
No 304
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.69 E-value=9.2e-05 Score=52.80 Aligned_cols=66 Identities=21% Similarity=0.113 Sum_probs=50.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhc----CCCeEEEEeeCCChhhhhHHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQ----GIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~----~~~v~~v~gDl~d~~~l~~~~ 78 (91)
.+|+||||+..+|..++..+..+|.+|+++.|+.... .+....++ ...+.+..+|+.|.+++...+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl-----~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~ 103 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKL-----LEAKAELELLTQVEDVSYKSVDVIDYDSVSKVI 103 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHH-----HHHHhhhhhhhccceeeEeccccccHHHHHHHH
Confidence 5899999999999999999999999999999975332 11111111 112568889999999888864
No 305
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=97.68 E-value=0.00039 Score=49.12 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=31.0
Q ss_pred CCCCeEEEEcC--CchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGG--TGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGa--tG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
+..+.++|||| +..||..+++.|.+.|.+|++ .|.
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~ 43 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTW 43 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeC
Confidence 56788999999 789999999999999999988 554
No 306
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=97.67 E-value=0.00011 Score=52.06 Aligned_cols=68 Identities=13% Similarity=0.099 Sum_probs=48.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCCCCCCCcchHHHhhh-hcCCCeEEEEeeCCChhhhhHHHh
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPVTQNSRPSKLEIHKE-FQGIGVTIIENLCDVGQVTSSQRM 79 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~~~~~~~~~~~~~~~-l~~~~v~~v~gDl~d~~~l~~~~~ 79 (91)
++++||||+||||++.+..+... .++.+.++...-.. + ...+.+ ...++.+++++|+.+...+.-.++
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s-~---~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~ 77 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCS-N---LKNLEPVRNSPNYKFVEGDIADADLVLYLFE 77 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeeccccc-c---cchhhhhccCCCceEeeccccchHHHHhhhc
Confidence 78999999999999999999975 47777777654332 1 111122 234578999999999877765543
No 307
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.62 E-value=9.3e-05 Score=53.93 Aligned_cols=36 Identities=17% Similarity=0.314 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~ 41 (91)
.+++|.|.||||++|..+++.|.++ .++++.+.+..
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~ 73 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADR 73 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChh
Confidence 3568999999999999999999988 57999988754
No 308
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.56 E-value=0.00017 Score=51.75 Aligned_cols=37 Identities=24% Similarity=0.236 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
|.+++|+|+|||||+|+.+++.|.+..+ +++.+.+..
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcCh
Confidence 4468999999999999999999998664 888875543
No 309
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=97.53 E-value=0.00036 Score=49.01 Aligned_cols=71 Identities=18% Similarity=0.141 Sum_probs=47.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCc-----EEEEecCCCCCCCcchHHHhhhhcC---CCeEEEEeeCCChhhhhHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-----TFVYARPVTQNSRPSKLEIHKEFQG---IGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-----V~~~~R~~~~~~~~~~~~~~~~l~~---~~v~~v~gDl~d~~~l~~~ 77 (91)
..+-++|||++..+|..++.+|++...+ +.+..|+.++. .+....+.++-+ ..++++..|+++-.++.++
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~ka--e~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A 79 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKA--EAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRA 79 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHH--HHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHH
Confidence 4566899999999999999999986543 44566765432 111122222222 3578899999998887776
Q ss_pred H
Q 037506 78 R 78 (91)
Q Consensus 78 ~ 78 (91)
.
T Consensus 80 ~ 80 (341)
T KOG1478|consen 80 S 80 (341)
T ss_pred H
Confidence 3
No 310
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.48 E-value=0.00025 Score=50.64 Aligned_cols=35 Identities=11% Similarity=0.150 Sum_probs=30.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~ 41 (91)
..+|+||||+|++|++++..|+..+ +++.+++++.
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~ 43 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPP 43 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCC
Confidence 3589999999999999999998744 5899999864
No 311
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.46 E-value=0.00041 Score=48.62 Aligned_cols=68 Identities=7% Similarity=0.006 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCCCCCCCcchHHH-hhhhcC--CCeEEEEeeCCChhhhhHH
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPVTQNSRPSKLEI-HKEFQG--IGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~~~~~~~~~~~~-~~~l~~--~~v~~v~gDl~d~~~l~~~ 77 (91)
..++++|+|| |.+|++++..|.+.|.. |+++.|+... .++.+. ...+.. ..+.+...|+.+.+.+.+.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~---~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~ 196 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDF---YERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAE 196 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchH---HHHHHHHHHHHhhcCCCceeEEechhhhhHHHhh
Confidence 4568999999 78999999999999986 9999997411 012211 122221 2345566788776666553
No 312
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.44 E-value=0.00033 Score=43.00 Aligned_cols=33 Identities=18% Similarity=0.373 Sum_probs=26.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC-CcEEEEe-cCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG-HNTFVYA-RPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~-R~~ 41 (91)
||.|+||||++|+.+++.|.++- +++..+. +..
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence 68999999999999999999854 4655544 443
No 313
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.40 E-value=0.00032 Score=50.36 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=26.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFV 36 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~ 36 (91)
++++|.|+||||++|..+++.|.+++|.+.-
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~ 33 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGT 33 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceE
Confidence 3479999999999999999999987765443
No 314
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.40 E-value=0.00037 Score=47.39 Aligned_cols=26 Identities=31% Similarity=0.498 Sum_probs=23.7
Q ss_pred CCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 15 GTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 15 atG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
+||.||.+++++|.++|++|+++.|.
T Consensus 23 SSGgIG~AIA~~la~~Ga~Vvlv~~~ 48 (227)
T TIGR02114 23 STGHLGKIITETFLSAGHEVTLVTTK 48 (227)
T ss_pred cccHHHHHHHHHHHHCCCEEEEEcCh
Confidence 58999999999999999999998763
No 315
>PRK04148 hypothetical protein; Provisional
Probab=97.38 E-value=0.00063 Score=43.07 Aligned_cols=55 Identities=15% Similarity=0.092 Sum_probs=41.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQ 72 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~ 72 (91)
.++++++|. | -|.+++..|.+.|++|++++.++. .. .......++++.+|+.+++
T Consensus 17 ~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~------aV---~~a~~~~~~~v~dDlf~p~ 71 (134)
T PRK04148 17 NKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEK------AV---EKAKKLGLNAFVDDLFNPN 71 (134)
T ss_pred CCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHH------HH---HHHHHhCCeEEECcCCCCC
Confidence 468999998 6 788889999999999999998642 22 2222346788999998754
No 316
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=97.34 E-value=0.0011 Score=57.77 Aligned_cols=34 Identities=12% Similarity=0.021 Sum_probs=31.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~ 40 (91)
.+.++||||++.||..++++|.++ |.+|+++.|+
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs 2031 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRS 2031 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCC
Confidence 468999999999999999999998 5899999987
No 317
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=97.32 E-value=0.00087 Score=38.07 Aligned_cols=34 Identities=21% Similarity=0.456 Sum_probs=30.9
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ 43 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (91)
+|+|+|| |++|.-++..|.+.|.+|+++.|....
T Consensus 1 ~vvViGg-G~ig~E~A~~l~~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIGG-GFIGIELAEALAELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEESS-SHHHHHHHHHHHHTTSEEEEEESSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHhCcEEEEEeccchh
Confidence 5889999 999999999999999999999997654
No 318
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=97.30 E-value=0.00044 Score=50.17 Aligned_cols=35 Identities=26% Similarity=0.356 Sum_probs=32.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|.|+||+|.+|.+++..|.+.|++|++++|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 46899999999999999999999999999999864
No 319
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=97.30 E-value=0.00055 Score=48.18 Aligned_cols=33 Identities=18% Similarity=0.328 Sum_probs=30.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++|.|+|+ |++|+.++..|.++|++|++++|+.
T Consensus 3 ~~V~VIG~-G~mG~~iA~~la~~G~~V~v~d~~~ 35 (308)
T PRK06129 3 GSVAIIGA-GLIGRAWAIVFARAGHEVRLWDADP 35 (308)
T ss_pred cEEEEECc-cHHHHHHHHHHHHCCCeeEEEeCCH
Confidence 57999995 9999999999999999999999874
No 320
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.29 E-value=0.00028 Score=51.35 Aligned_cols=64 Identities=23% Similarity=0.353 Sum_probs=45.6
Q ss_pred eEEEEcCCchHHHHHHHHHHh----CCCcEEEEecCCCCCCCcchHH-HhhhhcC------CCeEEEEeeCCChhhhhHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVS----SGHNTFVYARPVTQNSRPSKLE-IHKEFQG------IGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~----~g~~V~~~~R~~~~~~~~~~~~-~~~~l~~------~~v~~v~gDl~d~~~l~~~ 77 (91)
-+.|.|||||.|.++++++++ .+...-+..|+.. +.. .+..... ...-++.+|.+|++++.+.
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~------KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~em 80 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEK------KLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEM 80 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHH------HHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHH
Confidence 478999999999999999998 6677777778743 222 1111111 1123788999999999986
Q ss_pred H
Q 037506 78 R 78 (91)
Q Consensus 78 ~ 78 (91)
.
T Consensus 81 a 81 (423)
T KOG2733|consen 81 A 81 (423)
T ss_pred H
Confidence 3
No 321
>PRK10537 voltage-gated potassium channel; Provisional
Probab=97.29 E-value=0.001 Score=48.70 Aligned_cols=62 Identities=13% Similarity=-0.034 Sum_probs=47.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMR 80 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~ 80 (91)
+.+++|+|. |.+|+.+++.|.++|+++++++.+.. + .....+..++.||.+|++.++++-.+
T Consensus 240 k~HvII~G~-g~lg~~v~~~L~~~g~~vvVId~d~~-----~------~~~~~g~~vI~GD~td~e~L~~AgI~ 301 (393)
T PRK10537 240 KDHFIICGH-SPLAINTYLGLRQRGQAVTVIVPLGL-----E------HRLPDDADLIPGDSSDSAVLKKAGAA 301 (393)
T ss_pred CCeEEEECC-ChHHHHHHHHHHHCCCCEEEEECchh-----h------hhccCCCcEEEeCCCCHHHHHhcCcc
Confidence 457899998 88999999999999999999885421 1 11223678999999999888876433
No 322
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=97.29 E-value=0.00048 Score=50.59 Aligned_cols=36 Identities=17% Similarity=0.085 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|.+++|.|+|. |++|..++..|.+.||+|+++++++
T Consensus 1 m~~~kI~VIGl-G~~G~~~A~~La~~G~~V~~~D~~~ 36 (415)
T PRK11064 1 MSFETISVIGL-GYIGLPTAAAFASRQKQVIGVDINQ 36 (415)
T ss_pred CCccEEEEECc-chhhHHHHHHHHhCCCEEEEEeCCH
Confidence 44689999988 9999999999999999999999875
No 323
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=97.27 E-value=0.00091 Score=46.40 Aligned_cols=26 Identities=38% Similarity=0.612 Sum_probs=23.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH 32 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~ 32 (91)
+++|+|||++|.+|+++.+.+.+++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~ 26 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGF 26 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCC
Confidence 47899999999999999999999876
No 324
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=97.23 E-value=0.0008 Score=47.41 Aligned_cols=36 Identities=19% Similarity=0.344 Sum_probs=32.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+.+|+|+|+|+ |-+|+.++..|.+.|++|+++.|..
T Consensus 3 ~~~m~I~IiG~-GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 3 SETPRIGIIGT-GAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CcCcEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 35679999988 9999999999999999999999964
No 325
>PRK08655 prephenate dehydrogenase; Provisional
Probab=97.22 E-value=0.00067 Score=50.17 Aligned_cols=34 Identities=35% Similarity=0.481 Sum_probs=31.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+||+|.+|.+++..|.+.|++|++++|+.
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~ 34 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDP 34 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECCh
Confidence 5799999999999999999999999999999864
No 326
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=97.22 E-value=0.00083 Score=48.21 Aligned_cols=28 Identities=25% Similarity=0.243 Sum_probs=24.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFV 36 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~ 36 (91)
+|+|+||||++|..|++.|.+++|++.-
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~ 28 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDK 28 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhh
Confidence 5899999999999999999998887543
No 327
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.21 E-value=0.0025 Score=42.66 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=55.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhhhh
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRSLG 86 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~~~ 86 (91)
--+||||...+|..-+++|.++|..|.+++-+.++. .+..+++. .++-|...|++.+..++.++..+-.-.|
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg-----~~vakelg-~~~vf~padvtsekdv~aala~ak~kfg 82 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKG-----ADVAKELG-GKVVFTPADVTSEKDVRAALAKAKAKFG 82 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccc-----hHHHHHhC-CceEEeccccCcHHHHHHHHHHHHhhcc
Confidence 358999999999999999999999999999876543 12223343 3678889999999999998765443333
No 328
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=97.19 E-value=0.0013 Score=43.89 Aligned_cols=37 Identities=14% Similarity=0.086 Sum_probs=32.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.+..++|.|+|. |.+|+++++.|.+.|++|++.+++.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~ 61 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINE 61 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 456689999999 7999999999999999999888753
No 329
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=97.18 E-value=0.0009 Score=48.27 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=30.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.+|+|+|| |++|..++.+|.+.|++|+++.|..
T Consensus 2 ~~vvIIGa-G~~G~~~A~~La~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIGA-GITGVTTAYALAQRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 48999999 9999999999999999999999864
No 330
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=97.17 E-value=0.00095 Score=44.74 Aligned_cols=37 Identities=16% Similarity=0.277 Sum_probs=33.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (91)
|.+|..+|.||||.+|+-+++.+++++ -+|+++.|..
T Consensus 16 mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~ 54 (238)
T KOG4039|consen 16 MQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRE 54 (238)
T ss_pred hhccceEEEeccccccHHHHHHHHhcccceeEEEEEecc
Confidence 667899999999999999999999988 4899999875
No 331
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.15 E-value=0.0024 Score=46.77 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=32.8
Q ss_pred CCCCeEEEEcC----------------CchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGG----------------TGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGa----------------tG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+..++++|||| ||.+|.+++++|.++|++|+++.++.
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~ 235 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPV 235 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCC
Confidence 56689999999 47899999999999999999998764
No 332
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.14 E-value=0.00098 Score=47.85 Aligned_cols=34 Identities=18% Similarity=0.240 Sum_probs=28.9
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~ 40 (91)
+++|+|+||||++|+.+++.|.+. +++++++.++
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~ 36 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSR 36 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECc
Confidence 379999999999999999999976 5788777653
No 333
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=97.13 E-value=0.001 Score=47.08 Aligned_cols=33 Identities=18% Similarity=0.402 Sum_probs=30.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
+|+|.|+|+ |.+|+.++..|.+.|++|++++|+
T Consensus 2 ~mkI~IiG~-G~mG~~~A~~L~~~G~~V~~~~r~ 34 (341)
T PRK08229 2 MARICVLGA-GSIGCYLGGRLAAAGADVTLIGRA 34 (341)
T ss_pred CceEEEECC-CHHHHHHHHHHHhcCCcEEEEecH
Confidence 368999988 999999999999999999999985
No 334
>PRK06849 hypothetical protein; Provisional
Probab=97.13 E-value=0.0013 Score=47.56 Aligned_cols=37 Identities=22% Similarity=0.206 Sum_probs=33.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+.+|+|||||++..+|..+++.|.+.|++|++++...
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3568999999999999999999999999999998764
No 335
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.13 E-value=0.0015 Score=41.35 Aligned_cols=34 Identities=18% Similarity=0.231 Sum_probs=30.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (91)
|||.|+|++|.+|++++..|...+ .++.+++++.
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~ 36 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINE 36 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCc
Confidence 689999999999999999999877 5899999863
No 336
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=97.11 E-value=0.00085 Score=44.32 Aligned_cols=33 Identities=24% Similarity=0.296 Sum_probs=26.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. ||+|..++..|.+.||+|++++.++
T Consensus 1 M~I~ViGl-GyvGl~~A~~lA~~G~~V~g~D~~~ 33 (185)
T PF03721_consen 1 MKIAVIGL-GYVGLPLAAALAEKGHQVIGVDIDE 33 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-H
T ss_pred CEEEEECC-CcchHHHHHHHHhCCCEEEEEeCCh
Confidence 68999977 9999999999999999999999864
No 337
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=97.10 E-value=0.0011 Score=47.74 Aligned_cols=33 Identities=21% Similarity=0.279 Sum_probs=27.5
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCc
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHN 33 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~ 33 (91)
|.-..+.++|.|+||||++|..+++.|.+++|.
T Consensus 1 ~~~~~~~~kVaVvGAtG~vG~eLlrlL~~~~hP 33 (344)
T PLN02383 1 MALTENGPSVAIVGVTGAVGQEFLSVLTDRDFP 33 (344)
T ss_pred CCccCCCCeEEEEcCCChHHHHHHHHHHhCCCC
Confidence 333456679999999999999999999988874
No 338
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=97.07 E-value=0.0015 Score=45.34 Aligned_cols=36 Identities=14% Similarity=0.184 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+.++|.|+|+ |.+|..++..|.+.|++|++++++.
T Consensus 1 ~~~~kI~VIG~-G~mG~~ia~~la~~g~~V~~~d~~~ 36 (282)
T PRK05808 1 MGIQKIGVIGA-GTMGNGIAQVCAVAGYDVVMVDISD 36 (282)
T ss_pred CCccEEEEEcc-CHHHHHHHHHHHHCCCceEEEeCCH
Confidence 34568999999 9999999999999999999998764
No 339
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=97.05 E-value=0.0014 Score=42.06 Aligned_cols=34 Identities=26% Similarity=0.324 Sum_probs=29.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|++|.++|- |-+|+.+++.|+++||+|++++|++
T Consensus 1 m~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~ 34 (163)
T PF03446_consen 1 MMKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSP 34 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSH
T ss_pred CCEEEEEch-HHHHHHHHHHHHhcCCeEEeeccch
Confidence 578999999 9999999999999999999999874
No 340
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=97.05 E-value=0.0017 Score=45.69 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
..|+|.|+|+ |.+|+.++..|.+.||+|++++|+..
T Consensus 3 ~~m~I~iiG~-G~~G~~lA~~l~~~G~~V~~~~r~~~ 38 (308)
T PRK14619 3 QPKTIAILGA-GAWGSTLAGLASANGHRVRVWSRRSG 38 (308)
T ss_pred CCCEEEEECc-cHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 4578999988 99999999999999999999999753
No 341
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.04 E-value=0.0018 Score=45.60 Aligned_cols=39 Identities=21% Similarity=0.029 Sum_probs=32.7
Q ss_pred CCCCCCCeEEEEcCC--chHHHHHHHHHHhCCCcEEEEecC
Q 037506 2 EGKNTKPKKLIFGGT--GYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 2 ~~~~~~~~ilItGat--G~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
......|.++|||++ ..||.++++.|.++|++|.+.+|.
T Consensus 3 ~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~ 43 (299)
T PRK06300 3 KIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWV 43 (299)
T ss_pred CcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEecc
Confidence 344567889999994 789999999999999999987643
No 342
>PRK06444 prephenate dehydrogenase; Provisional
Probab=97.02 E-value=0.0011 Score=44.32 Aligned_cols=29 Identities=21% Similarity=0.461 Sum_probs=26.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEE
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFV 36 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~ 36 (91)
|+|.|+||+|.+|+++++.|.+.||.|++
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~~ 29 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVYI 29 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEEE
Confidence 58999999999999999999999999863
No 343
>PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated
Probab=97.02 E-value=0.0016 Score=45.57 Aligned_cols=33 Identities=24% Similarity=0.414 Sum_probs=30.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus 2 mkI~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~ 34 (325)
T PRK00094 2 MKIAVLGA-GSWGTALAIVLARNGHDVTLWARDP 34 (325)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCH
Confidence 68999998 9999999999999999999999864
No 344
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.01 E-value=0.0029 Score=46.32 Aligned_cols=35 Identities=23% Similarity=0.133 Sum_probs=31.1
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++++|||+++ +|.+.++.|.+.|++|++.++..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~ 38 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKP 38 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCC
Confidence 457899999977 99999999999999999998754
No 345
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.00 E-value=0.0027 Score=39.75 Aligned_cols=37 Identities=16% Similarity=0.215 Sum_probs=32.3
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCc-EEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHN-TFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~-V~~~~R~~ 41 (91)
....++++|+|+ |..|+.++..|.+.|.+ |+++.|+.
T Consensus 9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~ 46 (135)
T PF01488_consen 9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTP 46 (135)
T ss_dssp TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSH
T ss_pred CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCH
Confidence 346789999999 88999999999999976 99999963
No 346
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=96.95 E-value=0.0018 Score=46.67 Aligned_cols=33 Identities=21% Similarity=0.330 Sum_probs=30.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|+|+|| |.+|.+++.+|.++|++|+++.+..
T Consensus 1 ~~v~IVG~-Gi~Gls~A~~l~~~g~~V~vle~~~ 33 (416)
T PRK00711 1 MRVVVLGS-GVIGVTSAWYLAQAGHEVTVIDRQP 33 (416)
T ss_pred CEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 47999999 9999999999999999999999864
No 347
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=96.95 E-value=0.0055 Score=44.23 Aligned_cols=60 Identities=20% Similarity=0.221 Sum_probs=44.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHH
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQR 78 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~ 78 (91)
+++|+|+|+ |.+|..++..+.+.|++|++++.++.. |. ..+ .-..+.+|+.|.+.+.+..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~---pa-----~~~---ad~~~~~~~~D~~~l~~~a 61 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDS---PA-----AQV---ADEVIVADYDDVAALRELA 61 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCC---ch-----hHh---CceEEecCCCCHHHHHHHH
Confidence 468999999 899999999999999999999876422 11 111 1245667888888777753
No 348
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.95 E-value=0.0024 Score=44.52 Aligned_cols=36 Identities=14% Similarity=0.231 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|..++|.|+|+ |.+|..++..|+.+|++|++++|+.
T Consensus 2 ~~~~kI~vIGa-G~mG~~iA~~la~~G~~V~l~d~~~ 37 (292)
T PRK07530 2 MAIKKVGVIGA-GQMGNGIAHVCALAGYDVLLNDVSA 37 (292)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 45578999999 9999999999999999999999864
No 349
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=96.94 E-value=0.002 Score=44.65 Aligned_cols=33 Identities=30% Similarity=0.396 Sum_probs=30.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|+|+|+ |-+|+.++..|.+.|++|++++|+.
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~ 33 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRG 33 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCh
Confidence 57999998 9999999999999999999999953
No 350
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=96.93 E-value=0.0021 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=30.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~ 41 (91)
|+|.|+|+||++|..++..|+..|+ +|++++|..
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~ 36 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPK 36 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcc
Confidence 6899999999999999999999885 599999853
No 351
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.92 E-value=0.0024 Score=41.17 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR 39 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R 39 (91)
...++|+|+|| |-+|...++.|++.|++|++++.
T Consensus 11 l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIsp 44 (157)
T PRK06719 11 LHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVSP 44 (157)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcC
Confidence 45679999999 99999999999999999999964
No 352
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=96.91 E-value=0.0025 Score=44.46 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=31.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|.|+|+ |.+|+.++..|...|++|++++++.
T Consensus 3 i~~I~ViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 36 (291)
T PRK06035 3 IKVIGVVGS-GVMGQGIAQVFARTGYDVTIVDVSE 36 (291)
T ss_pred CcEEEEECc-cHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 468999998 9999999999999999999999864
No 353
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=96.91 E-value=0.0019 Score=43.72 Aligned_cols=33 Identities=18% Similarity=0.267 Sum_probs=27.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++..+||+|.||+.++++|.+.||+|++-.|+.
T Consensus 2 ~~~~i~GtGniG~alA~~~a~ag~eV~igs~r~ 34 (211)
T COG2085 2 MIIAIIGTGNIGSALALRLAKAGHEVIIGSSRG 34 (211)
T ss_pred cEEEEeccChHHHHHHHHHHhCCCeEEEecCCC
Confidence 344556669999999999999999999997764
No 354
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.89 E-value=0.0025 Score=42.65 Aligned_cols=35 Identities=17% Similarity=0.253 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
...++|+|+|| |-+|...++.|++.|.+|+++.+.
T Consensus 8 l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~ 42 (202)
T PRK06718 8 LSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPE 42 (202)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCC
Confidence 45679999999 999999999999999999999865
No 355
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=96.89 E-value=0.0027 Score=44.25 Aligned_cols=35 Identities=14% Similarity=0.299 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|.|+|+ |.+|+.++..|+..|++|++++++.
T Consensus 3 ~~~~V~vIG~-G~mG~~iA~~l~~~G~~V~~~d~~~ 37 (295)
T PLN02545 3 EIKKVGVVGA-GQMGSGIAQLAAAAGMDVWLLDSDP 37 (295)
T ss_pred CcCEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 3468999999 9999999999999999999999864
No 356
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.88 E-value=0.0029 Score=45.22 Aligned_cols=37 Identities=14% Similarity=0.211 Sum_probs=32.9
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
-+..++|.|+|+ |-+|+.++..++..|++|+++++++
T Consensus 4 ~~~i~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~ 40 (321)
T PRK07066 4 ITDIKTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAP 40 (321)
T ss_pred CCCCCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 345578999998 9999999999999999999999864
No 357
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=96.85 E-value=0.0026 Score=41.75 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=28.1
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+|.|+|+ |.+|+.++..++..|++|++++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~ 32 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSP 32 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECCh
Confidence 5899999 9999999999999999999999875
No 358
>PRK07236 hypothetical protein; Provisional
Probab=96.84 E-value=0.0034 Score=45.03 Aligned_cols=37 Identities=19% Similarity=0.376 Sum_probs=33.7
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.|+.++|+|+|| |..|..++..|.+.|++|+++.|.+
T Consensus 3 ~~~~~~ViIVGa-G~aGl~~A~~L~~~G~~v~v~E~~~ 39 (386)
T PRK07236 3 HMSGPRAVVIGG-SLGGLFAALLLRRAGWDVDVFERSP 39 (386)
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 366789999999 9999999999999999999999875
No 359
>PLN00106 malate dehydrogenase
Probab=96.84 E-value=0.0037 Score=44.74 Aligned_cols=38 Identities=13% Similarity=0.133 Sum_probs=31.9
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (91)
.-...||.|||++|.+|+.++..|...+ .++.+++++.
T Consensus 15 ~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~ 54 (323)
T PLN00106 15 GAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN 54 (323)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 3456799999999999999999998665 5899998865
No 360
>PRK05086 malate dehydrogenase; Provisional
Probab=96.83 E-value=0.0022 Score=45.59 Aligned_cols=34 Identities=18% Similarity=0.286 Sum_probs=28.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHh---CCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVS---SGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~---~g~~V~~~~R~~ 41 (91)
|||+|+||||.+|++++..|.. .++++++++|+.
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~ 37 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAP 37 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCC
Confidence 6899999999999999988754 346888888864
No 361
>PRK12921 2-dehydropantoate 2-reductase; Provisional
Probab=96.82 E-value=0.0026 Score=44.20 Aligned_cols=31 Identities=16% Similarity=0.290 Sum_probs=29.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEec
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYAR 39 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R 39 (91)
|+|+|+|+ |.+|..++..|.+.|++|++++|
T Consensus 1 mkI~IiG~-G~iG~~~a~~L~~~g~~V~~~~r 31 (305)
T PRK12921 1 MRIAVVGA-GAVGGTFGGRLLEAGRDVTFLVR 31 (305)
T ss_pred CeEEEECC-CHHHHHHHHHHHHCCCceEEEec
Confidence 57999988 99999999999999999999998
No 362
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=96.82 E-value=0.0089 Score=40.11 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.+.++|+|+|| |.+|..-++.|++.|.+|++++...
T Consensus 7 l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~ 42 (205)
T TIGR01470 7 LEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEEL 42 (205)
T ss_pred cCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCC
Confidence 35679999999 9999999999999999999998653
No 363
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.81 E-value=0.0034 Score=43.74 Aligned_cols=35 Identities=17% Similarity=0.263 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|.|+|+ |.+|+.++..|...|++|++++++.
T Consensus 2 ~~~kIaViGa-G~mG~~iA~~la~~G~~V~l~d~~~ 36 (287)
T PRK08293 2 DIKNVTVAGA-GVLGSQIAFQTAFHGFDVTIYDISD 36 (287)
T ss_pred CccEEEEECC-CHHHHHHHHHHHhcCCeEEEEeCCH
Confidence 3468999998 9999999999999999999999864
No 364
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.74 E-value=0.0037 Score=43.52 Aligned_cols=33 Identities=21% Similarity=0.292 Sum_probs=30.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++|.|+|+ |.+|..++..|.+.|++|++++++.
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~ 34 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQ 34 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCH
Confidence 57999999 9999999999999999999999874
No 365
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.73 E-value=0.0077 Score=44.62 Aligned_cols=35 Identities=17% Similarity=0.079 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+|+|+ |.+|..+++.|.++|++|+++++..
T Consensus 15 ~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~ 49 (480)
T PRK01438 15 QGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGD 49 (480)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3568999998 9999999999999999999998653
No 366
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=96.72 E-value=0.0038 Score=44.01 Aligned_cols=33 Identities=21% Similarity=0.204 Sum_probs=30.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.|+|+|.|+ |-||+.++-.|.+.|++|+++.|.
T Consensus 2 ~m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~ 34 (305)
T PRK05708 2 SMTWHILGA-GSLGSLWACRLARAGLPVRLILRD 34 (305)
T ss_pred CceEEEECC-CHHHHHHHHHHHhCCCCeEEEEec
Confidence 468999999 999999999999999999999996
No 367
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.72 E-value=0.0046 Score=43.36 Aligned_cols=34 Identities=15% Similarity=0.156 Sum_probs=31.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|.|+|+ |.+|+.++..|.+.|++|++++++.
T Consensus 4 ~~~I~vIGa-G~mG~~iA~~l~~~g~~V~~~d~~~ 37 (311)
T PRK06130 4 IQNLAIIGA-GTMGSGIAALFARKGLQVVLIDVME 37 (311)
T ss_pred ccEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCH
Confidence 468999988 9999999999999999999999864
No 368
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=96.70 E-value=0.0057 Score=38.36 Aligned_cols=36 Identities=22% Similarity=0.269 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~ 41 (91)
...++++|+|+ |.+|..+++.|.+.+ ++|++++|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~ 53 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTL 53 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCH
Confidence 45678999998 999999999999986 8899998864
No 369
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=96.69 E-value=0.0039 Score=44.23 Aligned_cols=33 Identities=15% Similarity=0.123 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
-.|+|+|| |.+|.+++.+|.++|++|+++.|..
T Consensus 4 ~dv~IIGg-Gi~G~s~A~~L~~~g~~V~lie~~~ 36 (376)
T PRK11259 4 YDVIVIGL-GSMGSAAGYYLARRGLRVLGLDRFM 36 (376)
T ss_pred ccEEEECC-CHHHHHHHHHHHHCCCeEEEEeccc
Confidence 35899999 9999999999999999999999864
No 370
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.68 E-value=0.0041 Score=43.99 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=31.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+|+|.|+|+ |-+|..++..|.+.||+|++++|+.
T Consensus 4 ~m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~ 37 (328)
T PRK14618 4 GMRVAVLGA-GAWGTALAVLAASKGVPVRLWARRP 37 (328)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 468999988 9999999999999999999999963
No 371
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=96.66 E-value=0.0048 Score=43.22 Aligned_cols=35 Identities=14% Similarity=0.332 Sum_probs=31.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
.++|.|+|+ |.+|..++..++..|++|+++++++.
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~ 39 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEE 39 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 358999999 99999999999999999999999753
No 372
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=96.64 E-value=0.0041 Score=43.17 Aligned_cols=33 Identities=27% Similarity=0.239 Sum_probs=29.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |.+|..++..|.+.|++|++++|+.
T Consensus 1 m~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~ 33 (279)
T PRK07417 1 MKIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRE 33 (279)
T ss_pred CeEEEEee-cHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47999985 9999999999999999999999864
No 373
>PRK07679 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.62 E-value=0.0053 Score=42.58 Aligned_cols=36 Identities=11% Similarity=0.179 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~ 41 (91)
|+.|+|.|+|+ |-+|..+++.|++.| ++|++++|+.
T Consensus 1 ~~~mkI~~IG~-G~mG~aia~~l~~~g~~~~~~v~v~~r~~ 40 (279)
T PRK07679 1 MSIQNISFLGA-GSIAEAIIGGLLHANVVKGEQITVSNRSN 40 (279)
T ss_pred CCCCEEEEECc-cHHHHHHHHHHHHCCCCCcceEEEECCCC
Confidence 45578999996 999999999999987 7888888853
No 374
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=96.62 E-value=0.0045 Score=44.37 Aligned_cols=32 Identities=19% Similarity=0.248 Sum_probs=27.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR 39 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R 39 (91)
++|.|+|+||++|+.+++.|.++. .++..+..
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~ 33 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVA 33 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEE
Confidence 479999999999999999888876 58877743
No 375
>PLN02256 arogenate dehydrogenase
Probab=96.57 E-value=0.0061 Score=43.21 Aligned_cols=36 Identities=31% Similarity=0.449 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+.+++|.|+|. |.+|.+++..|.+.|++|++++|+.
T Consensus 34 ~~~~kI~IIG~-G~mG~slA~~L~~~G~~V~~~d~~~ 69 (304)
T PLN02256 34 SRKLKIGIVGF-GNFGQFLAKTFVKQGHTVLATSRSD 69 (304)
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECcc
Confidence 45679999995 9999999999999999999998864
No 376
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.56 E-value=0.0045 Score=44.52 Aligned_cols=30 Identities=20% Similarity=0.301 Sum_probs=25.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhC-CCcEEEE
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSS-GHNTFVY 37 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~ 37 (91)
++|.|+||||++|..+++.|.+. .+++..+
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l 31 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYL 31 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEE
Confidence 47999999999999999999976 4677744
No 377
>TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase. All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively.
Probab=96.56 E-value=0.0045 Score=45.23 Aligned_cols=33 Identities=21% Similarity=0.215 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |++|..++..|.+.||+|++++++.
T Consensus 1 mkI~vIGl-G~~G~~lA~~La~~G~~V~~~d~~~ 33 (411)
T TIGR03026 1 MKIAVIGL-GYVGLPLAALLADLGHEVTGVDIDQ 33 (411)
T ss_pred CEEEEECC-CchhHHHHHHHHhcCCeEEEEECCH
Confidence 47999987 9999999999999999999999865
No 378
>PRK08818 prephenate dehydrogenase; Provisional
Probab=96.55 E-value=0.0058 Score=44.57 Aligned_cols=36 Identities=14% Similarity=0.202 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R~~ 41 (91)
.+++|.|+|.+|.||.++++.|.+. +++|++++|..
T Consensus 3 ~~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d 39 (370)
T PRK08818 3 AQPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPAD 39 (370)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCc
Confidence 4679999999999999999999864 88999998753
No 379
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.55 E-value=0.0051 Score=38.01 Aligned_cols=34 Identities=21% Similarity=0.306 Sum_probs=28.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHh-CCCcEEEE-ecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVS-SGHNTFVY-ARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~-~g~~V~~~-~R~~ 41 (91)
|||.|+|++|.+|+.+++.+.+ .++++.+. +|..
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTT
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCC
Confidence 5899999999999999999998 67886654 5554
No 380
>PTZ00325 malate dehydrogenase; Provisional
Probab=96.54 E-value=0.0058 Score=43.72 Aligned_cols=36 Identities=14% Similarity=0.107 Sum_probs=30.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~ 40 (91)
.+++||.|+|++|.||+.++..|...+ +++.++++.
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~ 43 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIV 43 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecC
Confidence 345699999999999999999888554 789999983
No 381
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.54 E-value=0.012 Score=41.92 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=33.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
...++|.|+|.+|.+|..++..|+++|+.|++..|..
T Consensus 157 l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t 193 (301)
T PRK14194 157 LTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRS 193 (301)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCC
Confidence 4568999999999999999999999999999997754
No 382
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.51 E-value=0.014 Score=47.53 Aligned_cols=64 Identities=11% Similarity=-0.031 Sum_probs=44.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC-Cc-------------EEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCCh
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG-HN-------------TFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVG 71 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~-------------V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~ 71 (91)
.+++|+|+|+ |++|+..++.|.+.. ++ |++.+++. +.++.+... .++++.+..|+.|.
T Consensus 568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~------~~a~~la~~-~~~~~~v~lDv~D~ 639 (1042)
T PLN02819 568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYL------KDAKETVEG-IENAEAVQLDVSDS 639 (1042)
T ss_pred cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCH------HHHHHHHHh-cCCCceEEeecCCH
Confidence 3678999998 999999999998753 33 66666643 223222211 12678899999998
Q ss_pred hhhhHH
Q 037506 72 QVTSSQ 77 (91)
Q Consensus 72 ~~l~~~ 77 (91)
+.+.+.
T Consensus 640 e~L~~~ 645 (1042)
T PLN02819 640 ESLLKY 645 (1042)
T ss_pred HHHHHh
Confidence 888775
No 383
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=96.51 E-value=0.007 Score=37.88 Aligned_cols=31 Identities=26% Similarity=0.472 Sum_probs=28.5
Q ss_pred EEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 10 KLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 10 ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+ |-+|..++.+|.+.|++|+++.|..
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~ 31 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP 31 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc
Confidence 688998 8899999999999999999999964
No 384
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.51 E-value=0.0089 Score=39.04 Aligned_cols=38 Identities=13% Similarity=0.169 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
....++|+|+|+++.+|..+++.|.+.|.+|+++.|..
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 45678999999966789999999999999999999864
No 385
>PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=96.51 E-value=0.006 Score=43.09 Aligned_cols=33 Identities=24% Similarity=0.261 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|+ |-+|..++..|.+.|++|+++.|+.
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~ 33 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNH 33 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCH
Confidence 47999999 9999999999999999999999863
No 386
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=96.50 E-value=0.0071 Score=42.92 Aligned_cols=36 Identities=22% Similarity=0.265 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+.++.|+|+|| |.+|...+.+|.++|++|+++.+..
T Consensus 2 ~~~~~vvVIGg-Gi~Gls~A~~La~~G~~V~vie~~~ 37 (387)
T COG0665 2 SMKMDVVIIGG-GIVGLSAAYYLAERGADVTVLEAGE 37 (387)
T ss_pred CCcceEEEECC-cHHHHHHHHHHHHcCCEEEEEecCc
Confidence 34568999996 9999999999999999999998764
No 387
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=96.50 E-value=0.0053 Score=39.26 Aligned_cols=32 Identities=22% Similarity=0.424 Sum_probs=30.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
||.|+|| |-.|.+++..|..+|++|+++.|+.
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~ 32 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDE 32 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCH
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccH
Confidence 6899999 9999999999999999999999974
No 388
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=96.46 E-value=0.03 Score=39.22 Aligned_cols=37 Identities=19% Similarity=0.424 Sum_probs=29.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCC-CcEE-EEecCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSG-HNTF-VYARPVT 42 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~-~~~R~~~ 42 (91)
+++||.|.|++|.+|+.+++.+.+.. .++. +++|..+
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~ 39 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGS 39 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCc
Confidence 35799999999999999999999765 4544 4667654
No 389
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=96.45 E-value=0.0068 Score=45.48 Aligned_cols=34 Identities=21% Similarity=0.245 Sum_probs=31.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|.|+|+ |.+|+.++..|++.|++|++++++.
T Consensus 4 i~kIavIG~-G~MG~~iA~~la~~G~~V~v~D~~~ 37 (495)
T PRK07531 4 IMKAACIGG-GVIGGGWAARFLLAGIDVAVFDPHP 37 (495)
T ss_pred cCEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 468999987 9999999999999999999999864
No 390
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=96.41 E-value=0.007 Score=43.60 Aligned_cols=34 Identities=15% Similarity=0.257 Sum_probs=27.2
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC---cEEEEec
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGH---NTFVYAR 39 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~---~V~~~~R 39 (91)
..++|.|.||||++|..+++.|.++.| ++..+..
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS 39 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALAS 39 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEc
Confidence 456899999999999999999998654 5555543
No 391
>COG1893 ApbA Ketopantoate reductase [Coenzyme metabolism]
Probab=96.40 E-value=0.012 Score=41.71 Aligned_cols=33 Identities=27% Similarity=0.455 Sum_probs=30.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|||+|.|+ |-+|+.+.-.|.+.|++|+.+.|+.
T Consensus 1 mkI~IlGa-GAvG~l~g~~L~~~g~~V~~~~R~~ 33 (307)
T COG1893 1 MKILILGA-GAIGSLLGARLAKAGHDVTLLVRSR 33 (307)
T ss_pred CeEEEECC-cHHHHHHHHHHHhCCCeEEEEecHH
Confidence 68999999 9999999999999999999999974
No 392
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.40 E-value=0.0095 Score=39.50 Aligned_cols=36 Identities=19% Similarity=0.323 Sum_probs=27.8
Q ss_pred CCCeEEEEc----------------CCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFG----------------GTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItG----------------atG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++||||+ .||..|.+|++.+..+|++|+.+..+.
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~ 53 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPS 53 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TT
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCc
Confidence 457888887 479999999999999999999999874
No 393
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=96.39 E-value=0.0077 Score=41.69 Aligned_cols=31 Identities=23% Similarity=0.337 Sum_probs=29.3
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.|+|+|| |.+|..++..|.++|++|+++.+.
T Consensus 1 DvvIIGa-Gi~G~~~A~~La~~G~~V~l~e~~ 31 (358)
T PF01266_consen 1 DVVIIGA-GIAGLSTAYELARRGHSVTLLERG 31 (358)
T ss_dssp EEEEECT-SHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCeEEEEeec
Confidence 3789999 999999999999999999999997
No 394
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=96.39 E-value=0.01 Score=34.40 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=26.9
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC---CcEEEE-ecC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG---HNTFVY-ARP 40 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g---~~V~~~-~R~ 40 (91)
||.|+|+ |.+|.++++.|++.| ++|.+. .|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~ 35 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRS 35 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESS
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCc
Confidence 5788855 999999999999999 999966 675
No 395
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=96.38 E-value=0.023 Score=43.65 Aligned_cols=37 Identities=22% Similarity=0.303 Sum_probs=33.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++++++|.|+|+ |+.|.-++..+.+.|++|.+++.++
T Consensus 19 ~~~~k~IgIIGg-Gqlg~mla~aA~~lG~~Vi~ld~~~ 55 (577)
T PLN02948 19 GVSETVVGVLGG-GQLGRMLCQAASQMGIKVKVLDPLE 55 (577)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 366789999999 8999999999999999999998764
No 396
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=96.37 E-value=0.022 Score=40.97 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=30.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.+|+|+|+|+ |..|..++..+.+.|++|++++.++
T Consensus 11 ~~~~ilIiG~-g~~~~~~~~a~~~~G~~v~~~~~~~ 45 (395)
T PRK09288 11 SATRVMLLGS-GELGKEVAIEAQRLGVEVIAVDRYA 45 (395)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3568999997 8999999999999999999998764
No 397
>PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional
Probab=96.35 E-value=0.0073 Score=42.35 Aligned_cols=33 Identities=21% Similarity=0.296 Sum_probs=30.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++|.|+|. |.+|..++..|.+.||+|++++|+.
T Consensus 2 ~~Ig~IGl-G~mG~~mA~~l~~~G~~V~v~d~~~ 34 (296)
T PRK15461 2 AAIAFIGL-GQMGSPMASNLLKQGHQLQVFDVNP 34 (296)
T ss_pred CeEEEEee-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 47999987 9999999999999999999999864
No 398
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=96.30 E-value=0.022 Score=41.61 Aligned_cols=65 Identities=18% Similarity=0.193 Sum_probs=46.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHHHhhhhhh
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQRMRSGRS 84 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~~~~~~~~ 84 (91)
+++|.|+|| |.+|+-++.+..+-|++|++++-++... .. .. .-.++.++.+|++.+++. ...+++
T Consensus 1 ~~tvgIlGG-GQLgrMm~~aa~~lG~~v~vLdp~~~~P---A~-----~v---a~~~i~~~~dD~~al~el-a~~~DV 65 (375)
T COG0026 1 MKTVGILGG-GQLGRMMALAAARLGIKVIVLDPDADAP---AA-----QV---ADRVIVAAYDDPEALREL-AAKCDV 65 (375)
T ss_pred CCeEEEEcC-cHHHHHHHHHHHhcCCEEEEecCCCCCc---hh-----hc---ccceeecCCCCHHHHHHH-HhhCCE
Confidence 367999999 9999999999999999999999654321 10 01 125566777777777775 354443
No 399
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.29 E-value=0.012 Score=40.92 Aligned_cols=36 Identities=19% Similarity=0.282 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~ 41 (91)
...++++|+|+ |.+|++++..|.+.| .+|+++.|+.
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~ 157 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTV 157 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 34578999998 999999999999999 7899999974
No 400
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=96.27 E-value=0.01 Score=41.31 Aligned_cols=34 Identities=32% Similarity=0.379 Sum_probs=30.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+++|.|+|. |.+|+.+++.|.+.|++|++++|+.
T Consensus 2 ~~~IgviG~-G~mG~~~a~~l~~~g~~v~~~d~~~ 35 (296)
T PRK11559 2 TMKVGFIGL-GIMGKPMSKNLLKAGYSLVVYDRNP 35 (296)
T ss_pred CceEEEEcc-CHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 358999986 9999999999999999999998864
No 401
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=96.27 E-value=0.008 Score=35.91 Aligned_cols=35 Identities=17% Similarity=0.272 Sum_probs=30.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
...++|+|+|| |-+|.+=++.|++.|.+|++++..
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~ 39 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPE 39 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESS
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCc
Confidence 45689999999 999999999999999999999976
No 402
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=96.26 E-value=0.01 Score=42.28 Aligned_cols=33 Identities=15% Similarity=0.162 Sum_probs=29.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARP 40 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~ 40 (91)
|||.|+|++|.+|++++-.|...+ .++.+++.+
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~ 35 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV 35 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 589999999999999999988877 578888876
No 403
>PRK05868 hypothetical protein; Validated
Probab=96.25 E-value=0.011 Score=42.41 Aligned_cols=35 Identities=11% Similarity=0.006 Sum_probs=31.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|++|+|+|| |-.|..++..|.+.|++|+++.+.+.
T Consensus 1 ~~~V~IvGg-G~aGl~~A~~L~~~G~~v~viE~~~~ 35 (372)
T PRK05868 1 MKTVVVSGA-SVAGTAAAYWLGRHGYSVTMVERHPG 35 (372)
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCEEEEcCCCC
Confidence 468999999 99999999999999999999998754
No 404
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.24 E-value=0.037 Score=38.28 Aligned_cols=33 Identities=21% Similarity=0.414 Sum_probs=28.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
+++|+|+|||+ =|+.+++.|.+.|++|++.+-.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat 34 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAG 34 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEcc
Confidence 56899999987 8999999999999988877644
No 405
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=96.23 E-value=0.011 Score=40.54 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=30.2
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC---CcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG---HNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g---~~V~~~~R~~ 41 (91)
+|+|.|+|+ |.+|..++..|.+.+ ++|.+++|+.
T Consensus 2 mm~I~iIG~-G~mG~~la~~l~~~g~~~~~v~v~~r~~ 38 (267)
T PRK11880 2 MKKIGFIGG-GNMASAIIGGLLASGVPAKDIIVSDPSP 38 (267)
T ss_pred CCEEEEEec-hHHHHHHHHHHHhCCCCcceEEEEcCCH
Confidence 468999997 999999999999998 7899999864
No 406
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=96.23 E-value=0.0094 Score=42.88 Aligned_cols=36 Identities=25% Similarity=0.314 Sum_probs=31.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
....+|+|+|+ |.+|++++..|...|. ++++++++.
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCc
Confidence 45678999999 9999999999999996 889988863
No 407
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=96.22 E-value=0.014 Score=40.37 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=29.3
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQ 43 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~ 43 (91)
.|+|+|| |..|..++..|.++|++|+++.|.+..
T Consensus 3 dV~IvGa-G~aGl~~A~~L~~~G~~v~i~E~~~~~ 36 (356)
T PF01494_consen 3 DVAIVGA-GPAGLAAALALARAGIDVTIIERRPDP 36 (356)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTCEEEEEESSSSC
T ss_pred eEEEECC-CHHHHHHHHHHHhcccccccchhcccc
Confidence 6899999 999999999999999999999997654
No 408
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.22 E-value=0.026 Score=40.06 Aligned_cols=37 Identities=14% Similarity=0.248 Sum_probs=33.0
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RP 40 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~ 40 (91)
....++|+|+|.++.+|..++..|+++|+.|++.. |.
T Consensus 155 ~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT 192 (296)
T PRK14188 155 DLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRT 192 (296)
T ss_pred CCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCC
Confidence 35678999999999999999999999999999995 54
No 409
>PRK08163 salicylate hydroxylase; Provisional
Probab=96.19 E-value=0.014 Score=41.75 Aligned_cols=36 Identities=22% Similarity=0.229 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
++++|+|+|| |-.|..++..|.+.|++|+++.|...
T Consensus 3 ~~~~V~IvGa-GiaGl~~A~~L~~~g~~v~v~Er~~~ 38 (396)
T PRK08163 3 KVTPVLIVGG-GIGGLAAALALARQGIKVKLLEQAAE 38 (396)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHhCCCcEEEEeeCcc
Confidence 4568999999 99999999999999999999998753
No 410
>PRK15057 UDP-glucose 6-dehydrogenase; Provisional
Probab=96.14 E-value=0.011 Score=43.27 Aligned_cols=32 Identities=22% Similarity=0.151 Sum_probs=27.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |++|..++..| +.||+|++++++.
T Consensus 1 mkI~VIGl-GyvGl~~A~~l-A~G~~VigvD~d~ 32 (388)
T PRK15057 1 MKITISGT-GYVGLSNGLLI-AQNHEVVALDILP 32 (388)
T ss_pred CEEEEECC-CHHHHHHHHHH-HhCCcEEEEECCH
Confidence 47999977 99999999554 5699999999975
No 411
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=96.14 E-value=0.013 Score=41.85 Aligned_cols=34 Identities=21% Similarity=0.270 Sum_probs=27.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~ 40 (91)
+.+|.|.|||||+|..|++.|.++.+ ++..+...
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 56899999999999999999988763 55555543
No 412
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=96.14 E-value=0.033 Score=39.86 Aligned_cols=32 Identities=25% Similarity=0.372 Sum_probs=29.4
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
||+|+|+ |..|..+++.+.+.|++|++++.++
T Consensus 1 kililG~-g~~~~~l~~aa~~~G~~v~~~d~~~ 32 (380)
T TIGR01142 1 RVLLLGS-GELGKEVAIEAQRLGVEVIAVDRYA 32 (380)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 5899997 9999999999999999999998865
No 413
>PRK06753 hypothetical protein; Provisional
Probab=96.13 E-value=0.014 Score=41.43 Aligned_cols=34 Identities=24% Similarity=0.280 Sum_probs=31.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|+|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 1 ~~V~IvGg-G~aGl~~A~~L~~~g~~v~v~E~~~~ 34 (373)
T PRK06753 1 MKIAIIGA-GIGGLTAAALLQEQGHEVKVFEKNES 34 (373)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEecCCc
Confidence 57999999 99999999999999999999998764
No 414
>PRK06223 malate dehydrogenase; Reviewed
Probab=96.13 E-value=0.016 Score=40.58 Aligned_cols=34 Identities=15% Similarity=0.226 Sum_probs=30.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
++||.|+|+ |.+|+.++..+...+. +|.+++++.
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~ 36 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVE 36 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCC
Confidence 479999999 9999999999988775 899999864
No 415
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=96.13 E-value=0.012 Score=41.65 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=29.4
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.|+|+|| |.+|.+++.+|.++|++|+++.+..
T Consensus 2 dv~IIG~-Gi~G~s~A~~L~~~G~~V~vle~~~ 33 (365)
T TIGR03364 2 DLIIVGA-GILGLAHAYAAARRGLSVTVIERSS 33 (365)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 4899999 9999999999999999999999864
No 416
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=96.12 E-value=0.013 Score=41.14 Aligned_cols=33 Identities=21% Similarity=0.344 Sum_probs=30.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |.+|..+++.|.+.|++|.+++|+.
T Consensus 1 M~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~ 33 (298)
T TIGR00872 1 MQLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQ 33 (298)
T ss_pred CEEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCH
Confidence 47999997 9999999999999999999999874
No 417
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=96.10 E-value=0.03 Score=41.42 Aligned_cols=34 Identities=15% Similarity=0.262 Sum_probs=31.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|+|+|| |++|.-+++.|.+.|.+|+++.|..
T Consensus 272 gk~VvVIGg-G~~a~d~A~~l~~~G~~Vtlv~~~~ 305 (449)
T TIGR01316 272 GKSVVVIGG-GNTAVDSARTALRLGAEVHCLYRRT 305 (449)
T ss_pred CCeEEEECC-CHHHHHHHHHHHHcCCEEEEEeecC
Confidence 478999999 9999999999999999999999864
No 418
>PTZ00318 NADH dehydrogenase-like protein; Provisional
Probab=96.09 E-value=0.012 Score=43.04 Aligned_cols=37 Identities=24% Similarity=0.389 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
+++++|+|+|| ||-|..+++.|...+++|+++++.+.
T Consensus 8 ~~~~~vVIvGg-G~aGl~~a~~L~~~~~~ItlI~~~~~ 44 (424)
T PTZ00318 8 LKKPNVVVLGT-GWAGAYFVRNLDPKKYNITVISPRNH 44 (424)
T ss_pred CCCCeEEEECC-CHHHHHHHHHhCcCCCeEEEEcCCCC
Confidence 45678999999 99999999999777789999987653
No 419
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=96.09 E-value=0.01 Score=39.67 Aligned_cols=35 Identities=17% Similarity=0.124 Sum_probs=30.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~ 40 (91)
....+|+|.|+ |.+|+.++..|.+.|. ++++++++
T Consensus 19 L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 19 LEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred HhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 45678999999 7799999999999997 68888877
No 420
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=96.08 E-value=0.017 Score=40.62 Aligned_cols=35 Identities=23% Similarity=0.272 Sum_probs=29.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
.++|+|.| .|.||+++++.|.++|+.|.++.++.+
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCc
Confidence 45677766 699999999999999999988887654
No 421
>PLN02712 arogenate dehydrogenase
Probab=96.07 E-value=0.016 Score=45.16 Aligned_cols=35 Identities=31% Similarity=0.536 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.++++|.|+|. |.+|.+++..|.+.|++|++++|+
T Consensus 50 ~~~~kIgIIG~-G~mG~slA~~L~~~G~~V~~~dr~ 84 (667)
T PLN02712 50 TTQLKIAIIGF-GNYGQFLAKTLISQGHTVLAHSRS 84 (667)
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 45679999995 999999999999999999999886
No 422
>PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=96.04 E-value=0.015 Score=40.79 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |.+|+.+++.|++.|++|++++|+.
T Consensus 1 m~Ig~IGl-G~MG~~mA~~L~~~g~~v~v~dr~~ 33 (301)
T PRK09599 1 MQLGMIGL-GRMGGNMARRLLRGGHEVVGYDRNP 33 (301)
T ss_pred CEEEEEcc-cHHHHHHHHHHHHCCCeEEEEECCH
Confidence 47999986 9999999999999999999999864
No 423
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=96.03 E-value=0.0062 Score=38.14 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=27.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA 38 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~ 38 (91)
...++|-|+|+ |.+|.+|.+.|.+.||+|..+.
T Consensus 8 ~~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~ 40 (127)
T PF10727_consen 8 AARLKIGIIGA-GRVGTALARALARAGHEVVGVY 40 (127)
T ss_dssp ----EEEEECT-SCCCCHHHHHHHHTTSEEEEES
T ss_pred CCccEEEEECC-CHHHHHHHHHHHHCCCeEEEEE
Confidence 45679999999 9999999999999999998875
No 424
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.03 E-value=0.013 Score=42.12 Aligned_cols=37 Identities=30% Similarity=0.328 Sum_probs=31.6
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
+.+.++|+|+|+ |-+|+++++.|...|. ++++++++.
T Consensus 21 ~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 21 KIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 345678999998 7799999999999996 888888864
No 425
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.01 E-value=0.02 Score=40.30 Aligned_cols=35 Identities=23% Similarity=0.328 Sum_probs=31.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++++|+|. |.+|+.+++.|...|.+|++++|+.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~ 184 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSS 184 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4578999999 8899999999999999999999864
No 426
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.01 E-value=0.018 Score=39.84 Aligned_cols=34 Identities=21% Similarity=0.328 Sum_probs=30.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++++|+|+ |.+|+.++..|.+.|++|++++|+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~ 150 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTV 150 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 568999999 8899999999999999999998864
No 427
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=95.99 E-value=0.023 Score=40.69 Aligned_cols=33 Identities=12% Similarity=0.211 Sum_probs=27.6
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~ 41 (91)
+|.|+|++|.+|++++..|...+ +++.+++++.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~ 40 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPP 40 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCC
Confidence 58999999999999999998744 3688898854
No 428
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=95.98 E-value=0.014 Score=41.49 Aligned_cols=31 Identities=16% Similarity=0.387 Sum_probs=28.8
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.|+|+|| |.+|.+++.+|.++|++|+++.+.
T Consensus 2 dvvIIGa-Gi~G~s~A~~La~~g~~V~l~e~~ 32 (380)
T TIGR01377 2 DVIVVGA-GIMGCFAAYHLAKHGKKTLLLEQF 32 (380)
T ss_pred cEEEECC-CHHHHHHHHHHHHCCCeEEEEecc
Confidence 4899998 999999999999999999999985
No 429
>TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase. This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism.
Probab=95.98 E-value=0.012 Score=40.91 Aligned_cols=32 Identities=22% Similarity=0.145 Sum_probs=28.9
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+|.|+|. |.+|+.++..|.+.|++|++++|+.
T Consensus 1 ~IgvIG~-G~mG~~iA~~l~~~G~~V~~~dr~~ 32 (291)
T TIGR01505 1 KVGFIGL-GIMGSPMSINLAKAGYQLHVTTIGP 32 (291)
T ss_pred CEEEEEe-cHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 4788886 9999999999999999999999874
No 430
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.98 E-value=0.021 Score=39.41 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=31.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..+++|+||+|.+|..+++.+...|.+|++++++.
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~ 197 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSP 197 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCH
Confidence 45899999999999999999999999999988753
No 431
>COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]
Probab=95.97 E-value=0.033 Score=39.39 Aligned_cols=66 Identities=17% Similarity=0.228 Sum_probs=47.1
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhh-----c-----CCCeEEEEeeCCChhhhhHH
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEF-----Q-----GIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l-----~-----~~~v~~v~gDl~d~~~l~~~ 77 (91)
++|.++|- |-.|..++..|+++||+|++++|++.+. .+.+... . ....+++..-+.|.+.+++.
T Consensus 1 ~kIafIGL-G~MG~pmA~~L~~aG~~v~v~~r~~~ka-----~~~~~~~Ga~~a~s~~eaa~~aDvVitmv~~~~~V~~V 74 (286)
T COG2084 1 MKIAFIGL-GIMGSPMAANLLKAGHEVTVYNRTPEKA-----AELLAAAGATVAASPAEAAAEADVVITMLPDDAAVRAV 74 (286)
T ss_pred CeEEEEcC-chhhHHHHHHHHHCCCEEEEEeCChhhh-----hHHHHHcCCcccCCHHHHHHhCCEEEEecCCHHHHHHH
Confidence 46888887 9999999999999999999999986431 1111110 0 01356777778888888887
Q ss_pred Hh
Q 037506 78 RM 79 (91)
Q Consensus 78 ~~ 79 (91)
+.
T Consensus 75 ~~ 76 (286)
T COG2084 75 LF 76 (286)
T ss_pred Hh
Confidence 53
No 432
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=95.90 E-value=0.017 Score=41.20 Aligned_cols=35 Identities=20% Similarity=0.230 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC---CCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSS---GHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~---g~~V~~~~R~ 40 (91)
|.+..|+|+|| |-.|..++-.|.++ |++|+++.|.
T Consensus 1 m~~~dv~IvGa-G~aGl~~A~~L~~~~~~G~~v~v~E~~ 38 (395)
T PRK05732 1 MSRMDVIIVGG-GMAGATLALALSRLSHGGLPVALIEAF 38 (395)
T ss_pred CCcCCEEEECc-CHHHHHHHHHhhhcccCCCEEEEEeCC
Confidence 45568999999 99999999999988 9999999984
No 433
>PRK06847 hypothetical protein; Provisional
Probab=95.89 E-value=0.024 Score=40.20 Aligned_cols=35 Identities=26% Similarity=0.158 Sum_probs=31.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
+++|+|+|| |..|..++..|.+.|++|+++.|...
T Consensus 4 ~~~V~IVGa-G~aGl~~A~~L~~~g~~v~v~E~~~~ 38 (375)
T PRK06847 4 VKKVLIVGG-GIGGLSAAIALRRAGIAVDLVEIDPE 38 (375)
T ss_pred cceEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 457999999 99999999999999999999998653
No 434
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=95.89 E-value=0.029 Score=36.53 Aligned_cols=37 Identities=19% Similarity=0.217 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
...++|.|+|- |-||+.+++.|..-|.+|++++|...
T Consensus 34 l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~ 70 (178)
T PF02826_consen 34 LRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPK 70 (178)
T ss_dssp STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCH
T ss_pred cCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCC
Confidence 34678999988 99999999999999999999999753
No 435
>PRK15059 tartronate semialdehyde reductase; Provisional
Probab=95.84 E-value=0.019 Score=40.34 Aligned_cols=33 Identities=24% Similarity=0.203 Sum_probs=29.4
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |.+|..+++.|++.||+|++++|.+
T Consensus 1 m~Ig~IGl-G~MG~~ma~~L~~~G~~v~v~~~~~ 33 (292)
T PRK15059 1 MKLGFIGL-GIMGTPMAINLARAGHQLHVTTIGP 33 (292)
T ss_pred CeEEEEcc-CHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 36899986 9999999999999999999998864
No 436
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=95.82 E-value=0.051 Score=38.77 Aligned_cols=57 Identities=18% Similarity=0.197 Sum_probs=40.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
+|.|+|+ |.+|..++..+.+.|++|++++.++.. |. ..+. -+.+.+++.|.+.+.+.
T Consensus 1 ~igiiG~-gql~~~l~~aa~~lG~~v~~~d~~~~~---p~-----~~~a---d~~~~~~~~d~~~i~~~ 57 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAARPLGIKVHVLDPDANS---PA-----VQVA---DHVVLAPFFDPAAIREL 57 (352)
T ss_pred CEEEECC-CHHHHHHHHHHHHcCCEEEEECCCCCC---Ch-----hHhC---ceeEeCCCCCHHHHHHH
Confidence 4889999 899999999999999999999876422 11 0111 13446677777766664
No 437
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=95.82 E-value=0.023 Score=40.63 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
...|+|+|| |-.|..++..|.+.|++|+++.+.+.
T Consensus 7 ~~dViIVGa-G~~Gl~~A~~L~~~G~~v~liE~~~~ 41 (388)
T PRK07494 7 HTDIAVIGG-GPAGLAAAIALARAGASVALVAPEPP 41 (388)
T ss_pred CCCEEEECc-CHHHHHHHHHHhcCCCeEEEEeCCCC
Confidence 346999999 99999999999999999999998753
No 438
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=95.82 E-value=0.023 Score=41.94 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=30.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|||.|+|. ||+|....--|.+.||+|++++.+.+
T Consensus 1 MkI~viGt-GYVGLv~g~~lA~~GHeVv~vDid~~ 34 (414)
T COG1004 1 MKITVIGT-GYVGLVTGACLAELGHEVVCVDIDES 34 (414)
T ss_pred CceEEECC-chHHHHHHHHHHHcCCeEEEEeCCHH
Confidence 68999987 99999999999999999999998653
No 439
>PLN02712 arogenate dehydrogenase
Probab=95.81 E-value=0.022 Score=44.40 Aligned_cols=35 Identities=34% Similarity=0.634 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.+++|.|+| .|.+|.++++.|.+.|++|++++|+.
T Consensus 368 ~~~kIgIIG-lG~mG~slA~~L~~~G~~V~~~dr~~ 402 (667)
T PLN02712 368 SKLKIAIVG-FGNFGQFLAKTMVKQGHTVLAYSRSD 402 (667)
T ss_pred CCCEEEEEe-cCHHHHHHHHHHHHCcCEEEEEECCh
Confidence 567999999 59999999999999999999999863
No 440
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=95.79 E-value=0.018 Score=44.45 Aligned_cols=33 Identities=24% Similarity=0.369 Sum_probs=30.5
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..|+|+|| |.+|..++.+|.++|++|+++++..
T Consensus 261 ~dVvIIGa-GIaG~s~A~~La~~G~~V~VlE~~~ 293 (662)
T PRK01747 261 RDAAIIGG-GIAGAALALALARRGWQVTLYEADE 293 (662)
T ss_pred CCEEEECc-cHHHHHHHHHHHHCCCeEEEEecCC
Confidence 47999999 9999999999999999999999863
No 441
>PRK09126 hypothetical protein; Provisional
Probab=95.79 E-value=0.023 Score=40.58 Aligned_cols=35 Identities=17% Similarity=0.271 Sum_probs=31.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
...|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 3 ~~dviIvGg-G~aGl~~A~~L~~~G~~v~v~E~~~~ 37 (392)
T PRK09126 3 HSDIVVVGA-GPAGLSFARSLAGSGLKVTLIERQPL 37 (392)
T ss_pred cccEEEECc-CHHHHHHHHHHHhCCCcEEEEeCCCc
Confidence 457999999 99999999999999999999998653
No 442
>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins. Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al
Probab=95.79 E-value=0.046 Score=31.44 Aligned_cols=34 Identities=21% Similarity=0.358 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEec
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYAR 39 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~R 39 (91)
...++++|.|. |.+|..+++.|.+. +.+|.+++|
T Consensus 21 ~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~r 55 (86)
T cd05191 21 LKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCDR 55 (86)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence 45678999999 99999999999998 578888877
No 443
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.78 E-value=0.091 Score=38.06 Aligned_cols=64 Identities=19% Similarity=0.192 Sum_probs=46.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCCCCCCcchHHHhhhhcCCCeEEEEeeCCChhhhhHH
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVTQNSRPSKLEIHKEFQGIGVTIIENLCDVGQVTSSQ 77 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~~~~~~~~~~~~~~l~~~~v~~v~gDl~d~~~l~~~ 77 (91)
...+++.|+|+.| +|+-=++...+-|++|+++++..+ .+.+... ..+.+++..-..|++.+.+.
T Consensus 180 ~pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~-----kkeea~~---~LGAd~fv~~~~d~d~~~~~ 243 (360)
T KOG0023|consen 180 GPGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSK-----KKEEAIK---SLGADVFVDSTEDPDIMKAI 243 (360)
T ss_pred CCCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCch-----hHHHHHH---hcCcceeEEecCCHHHHHHH
Confidence 3567899999988 999888888889999999999752 2343333 33666665555577766664
No 444
>PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed
Probab=95.77 E-value=0.023 Score=39.83 Aligned_cols=33 Identities=24% Similarity=0.271 Sum_probs=29.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|+|.|+|. |.+|..+++.|.+.|++|++++|+.
T Consensus 1 m~Ig~IGl-G~mG~~mA~~L~~~g~~v~v~dr~~ 33 (299)
T PRK12490 1 MKLGLIGL-GKMGGNMAERLREDGHEVVGYDVNQ 33 (299)
T ss_pred CEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47899986 9999999999999999999999864
No 445
>PRK08013 oxidoreductase; Provisional
Probab=95.75 E-value=0.024 Score=41.00 Aligned_cols=35 Identities=26% Similarity=0.315 Sum_probs=31.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
...|+|+|| |-.|..++-.|.+.|++|+++.|.+.
T Consensus 3 ~~dV~IvGa-GpaGl~~A~~La~~G~~v~viE~~~~ 37 (400)
T PRK08013 3 SVDVVIAGG-GMVGLAVACGLQGSGLRVAVLEQRVP 37 (400)
T ss_pred cCCEEEECc-CHHHHHHHHHHhhCCCEEEEEeCCCC
Confidence 357999999 99999999999999999999998654
No 446
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=95.75 E-value=0.028 Score=40.29 Aligned_cols=39 Identities=21% Similarity=0.332 Sum_probs=32.8
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|..++ +..|+|+|| |-.|..++-.|.++|++|+++.|.+
T Consensus 1 ~~~~~-~~dV~IvGa-G~aGl~~A~~La~~G~~v~liE~~~ 39 (392)
T PRK08773 1 MSRRS-RRDAVIVGG-GVVGAACALALADAGLSVALVEGRE 39 (392)
T ss_pred CCCCC-CCCEEEECc-CHHHHHHHHHHhcCCCEEEEEeCCC
Confidence 44433 347999999 9999999999999999999999864
No 447
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.74 E-value=0.028 Score=38.80 Aligned_cols=32 Identities=16% Similarity=0.258 Sum_probs=26.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC-CCcEEEEe
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS-GHNTFVYA 38 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~-g~~V~~~~ 38 (91)
+++|.|+|++|.+|+.+++.+.+. +.++.++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~ 33 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAV 33 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 368999999999999999988864 57877754
No 448
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=95.73 E-value=0.022 Score=43.25 Aligned_cols=35 Identities=14% Similarity=0.238 Sum_probs=28.0
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
.++|+|+|| |.-|..-++.|++.|++++++.|...
T Consensus 1 ~krVaVIGa-G~sGL~a~k~l~e~g~~~~~fE~~~~ 35 (531)
T PF00743_consen 1 AKRVAVIGA-GPSGLAAAKNLLEEGLEVTCFEKSDD 35 (531)
T ss_dssp --EEEEE---SHHHHHHHHHHHHTT-EEEEEESSSS
T ss_pred CCEEEEECc-cHHHHHHHHHHHHCCCCCeEEecCCC
Confidence 378999999 99999999999999999999998753
No 449
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.72 E-value=0.023 Score=40.66 Aligned_cols=33 Identities=21% Similarity=0.225 Sum_probs=28.0
Q ss_pred eEEEEcCCchHHHHHHHHHHhCC-------CcEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSG-------HNTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g-------~~V~~~~R~~ 41 (91)
||.|+||+|++|++++..|...+ +++.+++++.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~ 41 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPP 41 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCC
Confidence 79999999999999999888755 2588888864
No 450
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.71 E-value=0.026 Score=39.90 Aligned_cols=33 Identities=21% Similarity=0.272 Sum_probs=29.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (91)
|+|.|+|+ |.+|+.++..|...| ++|.+++++.
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~ 35 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINK 35 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCc
Confidence 47999999 999999999999988 6899999875
No 451
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.70 E-value=0.035 Score=40.25 Aligned_cols=32 Identities=16% Similarity=0.262 Sum_probs=26.1
Q ss_pred CCeEEEEcCCchHHHHHHHHHHh-CCCc---EEEEe
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVS-SGHN---TFVYA 38 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~-~g~~---V~~~~ 38 (91)
.++|.|.||||++|+.+++.|.+ ..++ +..+.
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~a 40 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLS 40 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEE
Confidence 46899999999999999999985 5666 55554
No 452
>PRK13512 coenzyme A disulfide reductase; Provisional
Probab=95.70 E-value=0.025 Score=41.55 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=29.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~ 41 (91)
||+|+|+|| |+-|...++.|.+. +++|+++++..
T Consensus 1 m~~VVIIGg-G~aG~~aA~~l~~~~~~~~I~li~~~~ 36 (438)
T PRK13512 1 MPKIIVVGA-VAGGATCASQIRRLDKESDIIIFEKDR 36 (438)
T ss_pred CCeEEEECC-cHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 468999999 99999999999875 58999999864
No 453
>PRK05335 tRNA (uracil-5-)-methyltransferase Gid; Reviewed
Probab=95.70 E-value=0.027 Score=42.03 Aligned_cols=34 Identities=15% Similarity=0.119 Sum_probs=30.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+++|+|+|| |.+|...+..|.+.|++|+++.+.+
T Consensus 2 ~~dVvVIGG-GlAGleAAlaLAr~Gl~V~LiE~rp 35 (436)
T PRK05335 2 MKPVNVIGA-GLAGSEAAWQLAKRGVPVELYEMRP 35 (436)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCcEEEEEccC
Confidence 457999999 9999999999999999999998643
No 454
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=95.69 E-value=0.027 Score=42.03 Aligned_cols=36 Identities=19% Similarity=0.328 Sum_probs=32.5
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
++.++|+|+|| |.-|...+.+|.+.|++|+++.+..
T Consensus 8 ~~~~~VaIIGA-G~aGL~aA~~l~~~G~~v~vfE~~~ 43 (461)
T PLN02172 8 INSQHVAVIGA-GAAGLVAARELRREGHTVVVFEREK 43 (461)
T ss_pred CCCCCEEEECC-cHHHHHHHHHHHhcCCeEEEEecCC
Confidence 34678999999 9999999999999999999999865
No 455
>cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like. E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol
Probab=95.68 E-value=0.017 Score=38.49 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=30.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~ 41 (91)
.+..+|+|+|+.| +|+.+++.|...| .++++++.+.
T Consensus 17 L~~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 17 LRSAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred HhhCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 4567899999966 9999999999999 5688887653
No 456
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.68 E-value=0.054 Score=40.11 Aligned_cols=34 Identities=18% Similarity=0.207 Sum_probs=30.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
.++|+|+|. |..|..+++.|.+.|++|++.++..
T Consensus 14 ~~~i~v~G~-G~sG~a~a~~L~~~G~~V~~~D~~~ 47 (458)
T PRK01710 14 NKKVAVVGI-GVSNIPLIKFLVKLGAKVTAFDKKS 47 (458)
T ss_pred CCeEEEEcc-cHHHHHHHHHHHHCCCEEEEECCCC
Confidence 468999988 8899999999999999999999764
No 457
>PRK12770 putative glutamate synthase subunit beta; Provisional
Probab=95.67 E-value=0.034 Score=39.65 Aligned_cols=35 Identities=23% Similarity=0.211 Sum_probs=31.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
.++|+|+|| |+.|...+..|.+.|++|+++.+...
T Consensus 18 ~~~VvIIG~-G~aGl~aA~~l~~~g~~v~lie~~~~ 52 (352)
T PRK12770 18 GKKVAIIGA-GPAGLAAAGYLACLGYEVHVYDKLPE 52 (352)
T ss_pred CCEEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 468999999 89999999999999999999998653
No 458
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=95.67 E-value=0.029 Score=40.27 Aligned_cols=33 Identities=18% Similarity=0.226 Sum_probs=30.3
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..|+|+|| |-.|..++-.|.+.|++|+++.+.+
T Consensus 4 ~dv~IvGg-G~aGl~~A~~L~~~G~~v~l~E~~~ 36 (384)
T PRK08849 4 YDIAVVGG-GMVGAATALGFAKQGRSVAVIEGGE 36 (384)
T ss_pred ccEEEECc-CHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 47999999 9999999999999999999999753
No 459
>PRK12831 putative oxidoreductase; Provisional
Probab=95.66 E-value=0.063 Score=39.96 Aligned_cols=35 Identities=17% Similarity=0.295 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+|+|| |++|.-+++.|.+.|.+|+++.|..
T Consensus 280 ~gk~VvVIGg-G~va~d~A~~l~r~Ga~Vtlv~r~~ 314 (464)
T PRK12831 280 VGKKVAVVGG-GNVAMDAARTALRLGAEVHIVYRRS 314 (464)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHcCCEEEEEeecC
Confidence 3479999999 9999999999999999999999854
No 460
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=95.66 E-value=0.026 Score=42.82 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+..++++|+|+ |.+|++++..|.+.|++|+++.|+.
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~ 412 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTY 412 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34578999999 7899999999999999999988863
No 461
>PRK12480 D-lactate dehydrogenase; Provisional
Probab=95.64 E-value=0.032 Score=39.98 Aligned_cols=35 Identities=20% Similarity=0.203 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|.|+|. |.||+.+++.|...|++|++++|..
T Consensus 145 ~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~ 179 (330)
T PRK12480 145 KNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYP 179 (330)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCh
Confidence 4578999988 9999999999999999999999864
No 462
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=95.64 E-value=0.033 Score=40.12 Aligned_cols=35 Identities=23% Similarity=0.261 Sum_probs=31.6
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
...|+|+|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 18 ~~dV~IvGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 52 (415)
T PRK07364 18 TYDVAIVGG-GIVGLTLAAALKDSGLRIALIEAQPA 52 (415)
T ss_pred ccCEEEECc-CHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 357999999 99999999999999999999998654
No 463
>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric. This protein is homologous to the small subunit of NADPH and NADH forms of glutamate synthase as found in eukaryotes and some bacteria. This protein is found in numerous species having no homolog of the glutamate synthase large subunit. The prototype of the family, from Pyrococcus sp. KOD1, was shown to be active as a homotetramer and to require NADPH.
Probab=95.64 E-value=0.035 Score=41.07 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+|+|| |+.|...+..|.+.|++|+++.+..
T Consensus 132 ~~~~V~IIG~-G~aGl~aA~~l~~~G~~V~vie~~~ 166 (449)
T TIGR01316 132 THKKVAVIGA-GPAGLACASELAKAGHSVTVFEALH 166 (449)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 4568999999 9999999999999999999999854
No 464
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=95.64 E-value=0.035 Score=39.51 Aligned_cols=36 Identities=19% Similarity=0.254 Sum_probs=30.8
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPVT 42 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~~ 42 (91)
..+||.|+|+ |.+|+.++-.|...+. ++.+++++..
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~ 42 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKE 42 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCc
Confidence 4469999998 9999999999998885 7999998643
No 465
>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=95.63 E-value=0.039 Score=40.53 Aligned_cols=35 Identities=23% Similarity=0.255 Sum_probs=31.0
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+|+|. |-+|.++++.|.++|++|++.+...
T Consensus 4 ~~~~~~v~G~-g~~G~~~a~~l~~~g~~v~~~d~~~ 38 (445)
T PRK04308 4 QNKKILVAGL-GGTGISMIAYLRKNGAEVAAYDAEL 38 (445)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 4578999998 6799999999999999999998754
No 466
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=95.63 E-value=0.02 Score=41.50 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=27.5
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEec
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYAR 39 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R 39 (91)
++||.|.|||||.|..|++.|..+. .++..++.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss 35 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISS 35 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeec
Confidence 5799999999999999999999875 56665553
No 467
>PRK07208 hypothetical protein; Provisional
Probab=95.61 E-value=0.033 Score=41.04 Aligned_cols=36 Identities=19% Similarity=0.181 Sum_probs=31.9
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
|.+++|+|+|| |+-|...+..|.++|++|+++.+..
T Consensus 2 ~~~~~vvIiGa-GisGL~aA~~L~~~g~~v~v~E~~~ 37 (479)
T PRK07208 2 TNKKSVVIIGA-GPAGLTAAYELLKRGYPVTVLEADP 37 (479)
T ss_pred CCCCcEEEECc-CHHHHHHHHHHHHCCCcEEEEecCC
Confidence 55678999999 9999999999999999999998654
No 468
>TIGR02279 PaaC-3OHAcCoADH 3-hydroxyacyl-CoA dehydrogenase PaaC. This 3-hydroxyacyl-CoA dehydrogenase is involved in the degradation of phenylacetic acid, presumably in steps following the opening of the phenyl ring. The sequences included in this model are all found in aparrent operons with other related genes such as paaA, paaB, paaD, paaE, paaF and paaN. Some genomes contain these other genes without an apparent paaC in the same operon - possibly in these cases a different dehydrogenase involved in fatty acid degradation may fill in the needed activity. This enzyme has domains which are members of the pfam02737 and pfam00725 families.
Probab=95.61 E-value=0.03 Score=42.33 Aligned_cols=35 Identities=20% Similarity=0.429 Sum_probs=31.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
+.++|.|+|+ |.+|+.++..|+..||+|++++|+.
T Consensus 4 ~~~kV~VIGa-G~MG~gIA~~la~aG~~V~l~d~~~ 38 (503)
T TIGR02279 4 NVVTVAVIGA-GAMGAGIAQVAASAGHQVLLYDIRA 38 (503)
T ss_pred CccEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4568999999 9999999999999999999999874
No 469
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=95.58 E-value=0.031 Score=39.20 Aligned_cols=34 Identities=18% Similarity=0.220 Sum_probs=29.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~ 41 (91)
.++|.|+|+ |.+|..++..|.+.|+ +|++++|+.
T Consensus 6 ~~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~ 41 (307)
T PRK07502 6 FDRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSA 41 (307)
T ss_pred CcEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCH
Confidence 468999985 9999999999999885 899998864
No 470
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=95.58 E-value=0.029 Score=40.41 Aligned_cols=33 Identities=21% Similarity=0.269 Sum_probs=30.2
Q ss_pred CeEEEEcCCchHHHHHHHHHHhC--CCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSS--GHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~R~~ 41 (91)
..|+|+|| |-+|..++.+|.++ |++|+++.|..
T Consensus 3 ~dVvIIGg-Gi~G~s~A~~La~~~~g~~V~llE~~~ 37 (393)
T PRK11728 3 YDFVIIGG-GIVGLSTAMQLQERYPGARIAVLEKES 37 (393)
T ss_pred ccEEEECC-cHHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 46999999 99999999999998 99999999864
No 471
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=95.57 E-value=0.027 Score=40.15 Aligned_cols=33 Identities=15% Similarity=0.135 Sum_probs=28.5
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCC--cEEEEecCC
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGH--NTFVYARPV 41 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~--~V~~~~R~~ 41 (91)
||.|+|++|.+|++++-.|...+. ++.+++++.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~ 35 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG 35 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 589999999999999999888774 788888765
No 472
>PRK07538 hypothetical protein; Provisional
Probab=95.56 E-value=0.031 Score=40.55 Aligned_cols=34 Identities=26% Similarity=0.306 Sum_probs=30.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|+|+|+|| |-.|..++..|.++|++|+++.|.+.
T Consensus 1 ~dV~IVGa-G~aGl~~A~~L~~~G~~v~v~E~~~~ 34 (413)
T PRK07538 1 MKVLIAGG-GIGGLTLALTLHQRGIEVVVFEAAPE 34 (413)
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCcEEEEEcCCc
Confidence 57999999 99999999999999999999998653
No 473
>PRK06126 hypothetical protein; Provisional
Probab=95.56 E-value=0.039 Score=41.47 Aligned_cols=37 Identities=22% Similarity=0.314 Sum_probs=32.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
+...+|+|+|| |-.|..++-.|.++|++|+++.|...
T Consensus 5 ~~~~~VlIVGa-GpaGL~~Al~La~~G~~v~viEr~~~ 41 (545)
T PRK06126 5 TSETPVLIVGG-GPVGLALALDLGRRGVDSILVERKDG 41 (545)
T ss_pred CccCCEEEECC-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34568999999 99999999999999999999998753
No 474
>PRK08268 3-hydroxy-acyl-CoA dehydrogenase; Validated
Probab=95.56 E-value=0.039 Score=41.71 Aligned_cols=35 Identities=17% Similarity=0.426 Sum_probs=31.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
.++|.|+|+ |.+|+.++..|+..||+|++++|+..
T Consensus 7 i~~V~VIGa-G~MG~gIA~~la~aG~~V~l~D~~~e 41 (507)
T PRK08268 7 IATVAVIGA-GAMGAGIAQVAAQAGHTVLLYDARAG 41 (507)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 468999999 99999999999999999999998753
No 475
>PRK06184 hypothetical protein; Provisional
Probab=95.54 E-value=0.038 Score=41.16 Aligned_cols=37 Identities=19% Similarity=0.189 Sum_probs=32.7
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
|++..|+|+|| |-.|..++-.|.++|++|+++.|.+.
T Consensus 1 ~~~~dVlIVGa-GpaGl~~A~~La~~Gi~v~viE~~~~ 37 (502)
T PRK06184 1 YTTTDVLIVGA-GPTGLTLAIELARRGVSFRLIEKAPE 37 (502)
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 34567999999 99999999999999999999998654
No 476
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=95.52 E-value=0.032 Score=33.89 Aligned_cols=32 Identities=25% Similarity=0.458 Sum_probs=27.1
Q ss_pred eEEEEcCCchHHHHHHHHHHh-CCCcEEEE-ecC
Q 037506 9 KKLIFGGTGYLGKYMVKASVS-SGHNTFVY-ARP 40 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~-~g~~V~~~-~R~ 40 (91)
+|.|+|++|.+|..+++.|.+ .++++.++ .|+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEech
Confidence 588999999999999999998 47888887 443
No 477
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=95.51 E-value=0.089 Score=38.24 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
....+|+|+|+ |-+|...++.+...|.+|++++|+.
T Consensus 165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~ 200 (370)
T TIGR00518 165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINI 200 (370)
T ss_pred CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCH
Confidence 34567999988 9999999999999999999999863
No 478
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.50 E-value=0.037 Score=39.55 Aligned_cols=35 Identities=14% Similarity=0.143 Sum_probs=29.8
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~ 41 (91)
.+||.|+|++|++|++++..|+..+. ++.+++...
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~ 43 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQ 43 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCC
Confidence 46899999999999999999998774 788888743
No 479
>PRK06545 prephenate dehydrogenase; Validated
Probab=95.50 E-value=0.031 Score=40.25 Aligned_cols=34 Identities=24% Similarity=0.369 Sum_probs=29.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
++|.|+|. |.+|.+++..|.+.|++|.+++++..
T Consensus 1 ~~I~iIG~-GliG~siA~~L~~~G~~v~i~~~~~~ 34 (359)
T PRK06545 1 RTVLIVGL-GLIGGSLALAIKAAGPDVFIIGYDPS 34 (359)
T ss_pred CeEEEEEe-CHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 36889977 99999999999999999999988653
No 480
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=95.49 E-value=0.03 Score=40.44 Aligned_cols=35 Identities=23% Similarity=0.221 Sum_probs=31.2
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
|....|+|.|| |-.|..++-.|.+.|++|+++.+.
T Consensus 2 m~~~dV~IvGa-G~~Gl~~A~~L~~~G~~v~viE~~ 36 (405)
T PRK08850 2 MQSVDVAIIGG-GMVGLALAAALKESDLRIAVIEGQ 36 (405)
T ss_pred CCcCCEEEECc-cHHHHHHHHHHHhCCCEEEEEcCC
Confidence 34457999999 999999999999999999999985
No 481
>PRK11749 dihydropyrimidine dehydrogenase subunit A; Provisional
Probab=95.48 E-value=0.032 Score=41.17 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|+|+|| |+.|...+..|.+.|++|+++.+..
T Consensus 139 ~~~~VvIIGg-GpaGl~aA~~l~~~g~~V~lie~~~ 173 (457)
T PRK11749 139 TGKKVAVIGA-GPAGLTAAHRLARKGYDVTIFEARD 173 (457)
T ss_pred CCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEccCC
Confidence 3468999999 9999999999999999999998764
No 482
>PRK07588 hypothetical protein; Provisional
Probab=95.48 E-value=0.037 Score=39.72 Aligned_cols=34 Identities=24% Similarity=0.214 Sum_probs=30.8
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~~ 42 (91)
++|+|+|| |-.|..++..|.++|++|+++.|.+.
T Consensus 1 ~~V~IVGg-G~aGl~~A~~L~~~G~~v~v~E~~~~ 34 (391)
T PRK07588 1 MKVAISGA-GIAGPTLAYWLRRYGHEPTLIERAPE 34 (391)
T ss_pred CeEEEECc-cHHHHHHHHHHHHCCCceEEEeCCCC
Confidence 47999999 99999999999999999999998653
No 483
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=95.47 E-value=0.04 Score=40.60 Aligned_cols=37 Identities=22% Similarity=0.389 Sum_probs=32.2
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCC-CcEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSG-HNTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g-~~V~~~~R~~ 41 (91)
....++|+|+|+ |-+|..+++.|.+.| .+|++++|+.
T Consensus 177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~ 214 (417)
T TIGR01035 177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTY 214 (417)
T ss_pred CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 345679999998 999999999999999 7899999864
No 484
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=95.47 E-value=0.037 Score=39.02 Aligned_cols=34 Identities=21% Similarity=0.303 Sum_probs=30.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT 42 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~ 42 (91)
++|.|+|+ |.+|+.++..|+..| +++.+++|+..
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~ 36 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEE 36 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcc
Confidence 47999997 999999999999998 68999999753
No 485
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=95.47 E-value=0.036 Score=34.37 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=28.3
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
.++|+|.|+ |-+|+.+++.|...|. ++++++.+.
T Consensus 2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~ 36 (135)
T PF00899_consen 2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDI 36 (135)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSB
T ss_pred CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcc
Confidence 468999999 8899999999999995 788887643
No 486
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.46 E-value=0.041 Score=38.74 Aligned_cols=36 Identities=14% Similarity=0.199 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
...++++|+|++|.+|+.++..|++.|..|++..|.
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 356789999999999999999999999999888874
No 487
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=95.44 E-value=0.033 Score=37.09 Aligned_cols=37 Identities=19% Similarity=0.206 Sum_probs=31.4
Q ss_pred CCCCCeEEEEcCCchHHHHHHHHHHhCCC-cEEEEecCC
Q 037506 4 KNTKPKKLIFGGTGYLGKYMVKASVSSGH-NTFVYARPV 41 (91)
Q Consensus 4 ~~~~~~ilItGatG~iG~~l~~~Ll~~g~-~V~~~~R~~ 41 (91)
+....+|+|+|+ |-+|+.+++.|...|. ++++++++.
T Consensus 18 kl~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d~ 55 (202)
T TIGR02356 18 RLLNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDDH 55 (202)
T ss_pred HhcCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCCE
Confidence 355678999998 8899999999999995 888888763
No 488
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=95.43 E-value=0.033 Score=40.16 Aligned_cols=33 Identities=21% Similarity=0.237 Sum_probs=30.7
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.+.|+|+|| |..|..++-.|.++|++|+++.|.
T Consensus 2 ~~dV~IvGa-G~aGl~lA~~L~~~G~~V~l~E~~ 34 (387)
T COG0654 2 MLDVAIVGA-GPAGLALALALARAGLDVTLLERA 34 (387)
T ss_pred CCCEEEECC-CHHHHHHHHHHHhCCCcEEEEccC
Confidence 357999999 999999999999999999999987
No 489
>PRK05442 malate dehydrogenase; Provisional
Probab=95.43 E-value=0.041 Score=39.48 Aligned_cols=36 Identities=14% Similarity=0.148 Sum_probs=29.9
Q ss_pred CCCeEEEEcCCchHHHHHHHHHHhCCC-------cEEEEecCC
Q 037506 6 TKPKKLIFGGTGYLGKYMVKASVSSGH-------NTFVYARPV 41 (91)
Q Consensus 6 ~~~~ilItGatG~iG~~l~~~Ll~~g~-------~V~~~~R~~ 41 (91)
+++||.|+|++|.+|++++..|+..+. ++.+++.+.
T Consensus 3 ~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~ 45 (326)
T PRK05442 3 APVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPP 45 (326)
T ss_pred CCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCC
Confidence 456999999999999999998887662 788888753
No 490
>PLN02688 pyrroline-5-carboxylate reductase
Probab=95.42 E-value=0.036 Score=37.90 Aligned_cols=32 Identities=16% Similarity=0.179 Sum_probs=27.9
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCC----cEEEE-ecC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGH----NTFVY-ARP 40 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~----~V~~~-~R~ 40 (91)
|+|.|+|. |-+|..+++.|++.|+ +|+++ +|+
T Consensus 1 ~kI~~IG~-G~mG~a~a~~L~~~g~~~~~~i~v~~~r~ 37 (266)
T PLN02688 1 FRVGFIGA-GKMAEAIARGLVASGVVPPSRISTADDSN 37 (266)
T ss_pred CeEEEECC-cHHHHHHHHHHHHCCCCCcceEEEEeCCC
Confidence 57999985 9999999999999998 88888 664
No 491
>PRK06567 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Validated
Probab=95.42 E-value=0.035 Score=45.20 Aligned_cols=35 Identities=26% Similarity=0.173 Sum_probs=32.0
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEecC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYARP 40 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~ 40 (91)
.+.++|+|+|| |.-|...+..|...||+|+++++.
T Consensus 381 ~tgKKVaVVGa-GPAGLsAA~~La~~Gh~Vtv~E~~ 415 (1028)
T PRK06567 381 PTNYNILVTGL-GPAGFSLSYYLLRSGHNVTAIDGL 415 (1028)
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhCCCeEEEEccc
Confidence 35679999999 999999999999999999999974
No 492
>PRK06928 pyrroline-5-carboxylate reductase; Reviewed
Probab=95.41 E-value=0.041 Score=38.26 Aligned_cols=33 Identities=12% Similarity=0.233 Sum_probs=29.0
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCC----CcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSG----HNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g----~~V~~~~R~~ 41 (91)
++|.|+|+ |-+|..++..|.+.+ ++|++++|+.
T Consensus 2 ~~I~iIG~-G~mG~ala~~L~~~g~~~~~~V~~~~r~~ 38 (277)
T PRK06928 2 EKIGFIGY-GSMADMIATKLLETEVATPEEIILYSSSK 38 (277)
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCCCcccEEEEeCCc
Confidence 57999986 999999999999988 7899998853
No 493
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.41 E-value=0.029 Score=40.99 Aligned_cols=33 Identities=15% Similarity=0.316 Sum_probs=25.6
Q ss_pred CeEEEEcCCchHHHHHHHHHHh-CCCc---EEEEecC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVS-SGHN---TFVYARP 40 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~-~g~~---V~~~~R~ 40 (91)
++|.|.||||++|+.+++.+++ ..++ ++.+...
T Consensus 2 ~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecch
Confidence 6899999999999999996665 4565 5665543
No 494
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=95.41 E-value=0.028 Score=40.80 Aligned_cols=34 Identities=24% Similarity=0.412 Sum_probs=29.7
Q ss_pred CeEEEEcCCchHHHHHHHHHHhCCCcEEEEecCC
Q 037506 8 PKKLIFGGTGYLGKYMVKASVSSGHNTFVYARPV 41 (91)
Q Consensus 8 ~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~R~~ 41 (91)
..++|-||+||.|..++++|.++|..-.+..|+.
T Consensus 7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~ 40 (382)
T COG3268 7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSS 40 (382)
T ss_pred eeEEEEccccchhHHHHHHHHHcCCchhhccCCH
Confidence 3689999999999999999999998876667764
No 495
>PRK13302 putative L-aspartate dehydrogenase; Provisional
Probab=95.40 E-value=0.044 Score=38.18 Aligned_cols=36 Identities=25% Similarity=0.251 Sum_probs=29.3
Q ss_pred CCCCCCCCeEEEEcCCchHHHHHHHHHHhC--CCcEEEEe
Q 037506 1 MEGKNTKPKKLIFGGTGYLGKYMVKASVSS--GHNTFVYA 38 (91)
Q Consensus 1 ~~~~~~~~~ilItGatG~iG~~l~~~Ll~~--g~~V~~~~ 38 (91)
|++ |.+++|.|+|. |.||+.+++.|.+. ++++.++.
T Consensus 1 ~~~-m~~irIGIIG~-G~IG~~~a~~L~~~~~~~el~aV~ 38 (271)
T PRK13302 1 MSS-RPELRVAIAGL-GAIGKAIAQALDRGLPGLTLSAVA 38 (271)
T ss_pred CCC-CCeeEEEEECc-cHHHHHHHHHHHhcCCCeEEEEEE
Confidence 556 66789999998 99999999999873 68877554
No 496
>TIGR02130 dapB_plant dihydrodipicolinate reductase. This narrow family includes genes from Arabidopsis and Fibrobacter succinogenes (which probably recieved the gene from a plant via lateral gene transfer). The sequences are distantly related to the dihydrodipicolinate reductases from archaea. In Fibrobacter this gene is the only candidate DHPR in the genome.
Probab=95.40 E-value=0.14 Score=36.15 Aligned_cols=29 Identities=21% Similarity=0.334 Sum_probs=26.3
Q ss_pred eEEEEcCCchHHHHHHHHHHhCCCcEEEE
Q 037506 9 KKLIFGGTGYLGKYMVKASVSSGHNTFVY 37 (91)
Q Consensus 9 ~ilItGatG~iG~~l~~~Ll~~g~~V~~~ 37 (91)
+|+|.|++|.+|+.+++...+.+.++...
T Consensus 2 ~V~V~Ga~GkMG~~v~~av~~~~~~Lv~~ 30 (275)
T TIGR02130 2 QIMVNGCPGKMGKAVAEAADAAGLEIVPT 30 (275)
T ss_pred eEEEeCCCChHHHHHHHHHhcCCCEEEee
Confidence 68999999999999999999888887774
No 497
>PLN02353 probable UDP-glucose 6-dehydrogenase
Probab=95.39 E-value=0.037 Score=41.58 Aligned_cols=34 Identities=21% Similarity=0.190 Sum_probs=29.4
Q ss_pred CCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCC
Q 037506 7 KPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPV 41 (91)
Q Consensus 7 ~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~ 41 (91)
+|+|.|+|. ||+|..++-.|.+.| ++|++++.+.
T Consensus 1 ~m~I~ViG~-GyvGl~~A~~lA~~g~g~~V~gvD~~~ 36 (473)
T PLN02353 1 MVKICCIGA-GYVGGPTMAVIALKCPDIEVVVVDISV 36 (473)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCeEEEEECCH
Confidence 478999977 999999999999884 7899998764
No 498
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.37 E-value=0.052 Score=38.39 Aligned_cols=33 Identities=12% Similarity=0.198 Sum_probs=30.6
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEE
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVY 37 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~ 37 (91)
...++|.|+|.||.+|..++..|+++|+.|++.
T Consensus 156 l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~ 188 (284)
T PRK14179 156 LEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLT 188 (284)
T ss_pred CCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEE
Confidence 456899999999999999999999999999987
No 499
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=95.36 E-value=0.042 Score=40.65 Aligned_cols=37 Identities=22% Similarity=0.203 Sum_probs=32.1
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCC--CcEEEEecCCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSG--HNTFVYARPVT 42 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g--~~V~~~~R~~~ 42 (91)
+.+++|+|.|| ||-|.+.+..|..+- .+|++++|...
T Consensus 1 ~~~~~iVIlGg-GfgGl~~a~~l~~~~~~~~itLVd~~~~ 39 (405)
T COG1252 1 MMKKRIVILGG-GFGGLSAAKRLARKLPDVEITLVDRRDY 39 (405)
T ss_pred CCCceEEEECC-cHHHHHHHHHhhhcCCCCcEEEEeCCCc
Confidence 35789999999 999999999999874 88999998754
No 500
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.36 E-value=0.033 Score=42.11 Aligned_cols=36 Identities=22% Similarity=0.360 Sum_probs=31.4
Q ss_pred CCCCeEEEEcCCchHHHHHHHHHHhCCCcEEEEe-cCC
Q 037506 5 NTKPKKLIFGGTGYLGKYMVKASVSSGHNTFVYA-RPV 41 (91)
Q Consensus 5 ~~~~~ilItGatG~iG~~l~~~Ll~~g~~V~~~~-R~~ 41 (91)
+.+++|.|+|| |.-|.+-+++|.+.|++|+++- |+.
T Consensus 13 ~~~~~VIVIGA-GiaGLsAArqL~~~G~~V~VLEARdR 49 (501)
T KOG0029|consen 13 GKKKKVIVIGA-GLAGLSAARQLQDFGFDVLVLEARDR 49 (501)
T ss_pred cCCCcEEEECC-cHHHHHHHHHHHHcCCceEEEeccCC
Confidence 45678999999 9999999999999999999984 543
Done!